BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047719
(596 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 202 bits (514), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 113/294 (38%), Positives = 165/294 (56%), Gaps = 20/294 (6%)
Query: 273 RLALTDIKQATLGFNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTE 332
R +L +++ A+ F+ I+G G VYKG L G VAVKR K R + F TE
Sbjct: 27 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRL-KEERXQGGELQFQTE 85
Query: 333 FATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNI 392
++ + H+NL++L+G+C E +LVY Y+ NGS+ L S L W KR I
Sbjct: 86 VEMISMAV-HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 393 VLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFE------------ATIPA 440
LG A L+YLH+ C+ +IIHRDVKA NILLD EF A +GDF
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 204
Query: 441 GTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVD------NDGCVIVDWVWNLR 494
GT+G++APEY+ +G SEKTDV+ +GV+ LE+ G+ D +D +++DWV L
Sbjct: 205 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 264
Query: 495 KKGKLLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILKGEA 548
K+ KL D L+G + +E+E+++ V L C + +RP + E R+L+G+
Sbjct: 265 KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 318
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 163/294 (55%), Gaps = 20/294 (6%)
Query: 273 RLALTDIKQATLGFNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTE 332
R +L +++ A+ F I+G G VYKG L G VAVKR K R + F TE
Sbjct: 19 RFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRL-KEERTQGGELQFQTE 77
Query: 333 FATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNI 392
++ + H+NL++L+G+C E +LVY Y+ NGS+ L S L W KR I
Sbjct: 78 VEMISMAV-HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 393 VLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFE------------ATIPA 440
LG A L+YLH+ C+ +IIHRDVKA NILLD EF A +GDF
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 196
Query: 441 GTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVD------NDGCVIVDWVWNLR 494
G +G++APEY+ +G SEKTDV+ +GV+ LE+ G+ D +D +++DWV L
Sbjct: 197 GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256
Query: 495 KKGKLLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILKGEA 548
K+ KL D L+G + +E+E+++ V L C + +RP + E R+L+G+
Sbjct: 257 KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 150/290 (51%), Gaps = 39/290 (13%)
Query: 273 RLALTDIKQATLGFNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTE 332
R+ L D+++AT F+ ++G G VYKG L G VA+KR R P +++
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR----------RTPESSQ 77
Query: 333 --------FATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVL 384
T++ C RH +LV L G+C E NE++L+Y+Y+ NG+L + L+ + ++ +
Sbjct: 78 GIEEFETEIETLSFC-RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSM 136
Query: 385 SWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT------- 437
SWE+RL I +G A L YLH R IIHRDVK+ NILLD F K+ DF +
Sbjct: 137 SWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELD 193
Query: 438 ------IPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPV----DNDGCVIV 487
+ GT+GY+ PEY G +EK+DVYSFGVV EV +S + + +
Sbjct: 194 QTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLA 253
Query: 488 DWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSV 537
+W G+L D L K + + + + C+ + E RPS+
Sbjct: 254 EWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSM 303
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 150/290 (51%), Gaps = 39/290 (13%)
Query: 273 RLALTDIKQATLGFNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTE 332
R+ L D+++AT F+ ++G G VYKG L G VA+KR R P +++
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR----------RTPESSQ 77
Query: 333 --------FATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVL 384
T++ C RH +LV L G+C E NE++L+Y+Y+ NG+L + L+ + ++ +
Sbjct: 78 GIEEFETEIETLSFC-RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSM 136
Query: 385 SWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT------- 437
SWE+RL I +G A L YLH R IIHRDVK+ NILLD F K+ DF +
Sbjct: 137 SWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELG 193
Query: 438 ------IPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPV----DNDGCVIV 487
+ GT+GY+ PEY G +EK+DVYSFGVV EV +S + + +
Sbjct: 194 QTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLA 253
Query: 488 DWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSV 537
+W G+L D L K + + + + C+ + E RPS+
Sbjct: 254 EWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSM 303
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 146/287 (50%), Gaps = 31/287 (10%)
Query: 278 DIKQATLGFNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRV--ECARNPFTTEFAT 335
D + ++G NK +GEG VYKG + + VAVK+ + E + F E
Sbjct: 22 DERPISVGGNK---MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKV 77
Query: 336 MAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGS-LDKILHNNSSSSIVLSWEKRLNIVL 394
MA C +H+NLV+L G+ +G++L LVY Y+PNGS LD++ + + LSW R I
Sbjct: 78 MAKC-QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--LSWHMRCKIAQ 134
Query: 395 GVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA-------------G 441
G A+ +++LH E IHRD+K+ NILLD F AK+ DF + G
Sbjct: 135 GAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVG 191
Query: 442 TMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDND---GCVIVDWVWNLRKKGK 498
T Y+APE + G + K+D+YSFGVV LE+ G VD ++ ++
Sbjct: 192 TTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKT 250
Query: 499 LLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILK 545
+ D D ++ + +E M V C+H KRP +K+ ++L+
Sbjct: 251 IEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 147/287 (51%), Gaps = 31/287 (10%)
Query: 278 DIKQATLGFNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRV--ECARNPFTTEFAT 335
D + ++G NK +GEG VYKG + + VAVK+ + E + F E
Sbjct: 28 DERPISVGGNK---MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKV 83
Query: 336 MAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGS-LDKILHNNSSSSIVLSWEKRLNIVL 394
MA C +H+NLV+L G+ +G++L LVY Y+PNGS LD++ + + LSW R I
Sbjct: 84 MAKC-QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--LSWHMRCKIAQ 140
Query: 395 GVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGD---------FEATIP----AG 441
G A+ +++LH E IHRD+K+ NILLD F AK+ D F T+ G
Sbjct: 141 GAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVG 197
Query: 442 TMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDND---GCVIVDWVWNLRKKGK 498
T Y+APE + G + K+D+YSFGVV LE+ G VD ++ ++
Sbjct: 198 TTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKT 256
Query: 499 LLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILK 545
+ D D ++ + +E M V C+H KRP +K+ ++L+
Sbjct: 257 IEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 147/287 (51%), Gaps = 31/287 (10%)
Query: 278 DIKQATLGFNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRV--ECARNPFTTEFAT 335
D + ++G NK +GEG VYKG + + VAVK+ + E + F E
Sbjct: 28 DERPISVGGNK---MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKV 83
Query: 336 MAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGS-LDKILHNNSSSSIVLSWEKRLNIVL 394
MA C +H+NLV+L G+ +G++L LVY Y+PNGS LD++ + + LSW R I
Sbjct: 84 MAKC-QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--LSWHMRCKIAQ 140
Query: 395 GVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGD---------FEATIP----AG 441
G A+ +++LH E IHRD+K+ NILLD F AK+ D F T+ G
Sbjct: 141 GAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVG 197
Query: 442 TMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDND---GCVIVDWVWNLRKKGK 498
T Y+APE + G + K+D+YSFGVV LE+ G VD ++ ++
Sbjct: 198 TTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKT 256
Query: 499 LLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILK 545
+ D D ++ + +E M V C+H KRP +K+ ++L+
Sbjct: 257 IEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 140/287 (48%), Gaps = 31/287 (10%)
Query: 278 DIKQATLGFNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRV--ECARNPFTTEFAT 335
D + ++G NK GEG VYKG + + VAVK+ + E + F E
Sbjct: 19 DERPISVGGNK---XGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKV 74
Query: 336 MAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGS-LDKILHNNSSSSIVLSWEKRLNIVL 394
A C +H+NLV+L G+ +G++L LVY Y PNGS LD++ + + LSW R I
Sbjct: 75 XAKC-QHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP--LSWHXRCKIAQ 131
Query: 395 GVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-------------EATIPAG 441
G A+ +++LH E IHRD+K+ NILLD F AK+ DF + G
Sbjct: 132 GAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVG 188
Query: 442 TMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDND---GCVIVDWVWNLRKKGK 498
T Y APE + G + K+D+YSFGVV LE+ G VD ++ ++
Sbjct: 189 TTAYXAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKT 247
Query: 499 LLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILK 545
+ D D + + +E V C+H KRP +K+ ++L+
Sbjct: 248 IEDYID-KKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 286 FNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
N +G G+ TV++ G VAVK + + N F E A M LRH N+
Sbjct: 39 LNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKR-LRHPNI 96
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
V G + L +V EYL GSL ++LH S + L +RL++ VA ++YLH
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHK-SGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAPEYVYSG 454
I+HRD+K+ N+L+D ++ K+ DF + AGT ++APE +
Sbjct: 156 R-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 455 VPSEKTDVYSFGVVALEVAAGKSPVDN 481
+EK+DVYSFGV+ E+A + P N
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGN 241
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 286 FNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
N +G G+ TV++ G VAVK + + N F E A M LRH N+
Sbjct: 39 LNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKR-LRHPNI 96
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
V G + L +V EYL GSL ++LH S + L +RL++ VA ++YLH
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHK-SGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAPEYVYSG 454
I+HR++K+ N+L+D ++ K+ DF + AGT ++APE +
Sbjct: 156 R-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 455 VPSEKTDVYSFGVVALEVAAGKSPVDN 481
+EK+DVYSFGV+ E+A + P N
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGN 241
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 41/276 (14%)
Query: 289 NRIVGEGASATVYKGSLPSGGA----VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
+I+G G S V G L G VA+K K E R F +E A++ G H N
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL-KAGYTERQRRDFLSE-ASIMGQFDHPN 111
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L+G G ++V EY+ NGSLD L + ++ + + ++ GV + + YL
Sbjct: 112 IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIM---QLVGMLRGVGAGMRYL- 167
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF------------EATIPAGT--MGYLAPEY 450
+ +HRD+ A N+L+D+ K+ DF T G + + APE
Sbjct: 168 --SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEA 225
Query: 451 VYSGVPSEKTDVYSFGVVALEVAA-GKSPVDNDGCVIVDWVWNLRKKGKLLDAAD-FRLR 508
+ S +DV+SFGVV EV A G+ P WN+ + + + +RL
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLAYGERP-----------YWNMTNRDVISSVEEGYRLP 274
Query: 509 GKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARIL 544
LM L C H + +RP + +L
Sbjct: 275 APMGCPHALHQLM--LDCWHKDRAQRPRFSQIVSVL 308
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 41/276 (14%)
Query: 289 NRIVGEGASATVYKGSLPSGGA----VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
+I+G G S V G L G VA+K K E R F +E A++ G H N
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL-KAGYTERQRRDFLSE-ASIMGQFDHPN 111
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L+G G ++V EY+ NGSLD L + ++ + + ++ GV + + YL
Sbjct: 112 IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIM---QLVGMLRGVGAGMRYL- 167
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF------------EATIPAGT--MGYLAPEY 450
+ +HRD+ A N+L+D+ K+ DF T G + + APE
Sbjct: 168 --SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEA 225
Query: 451 VYSGVPSEKTDVYSFGVVALEVAA-GKSPVDNDGCVIVDWVWNLRKKGKLLDAAD-FRLR 508
+ S +DV+SFGVV EV A G+ P WN+ + + + +RL
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLAYGERP-----------YWNMTNRDVISSVEEGYRLP 274
Query: 509 GKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARIL 544
LM L C H + +RP + +L
Sbjct: 275 APMGCPHALHQLM--LDCWHKDRAQRPRFSQIVSVL 308
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 135/327 (41%), Gaps = 59/327 (18%)
Query: 274 LALTDIKQATLGFNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEF 333
L + D K+ + +VG GA V K VA+K+ E E R F E
Sbjct: 3 LHMIDYKEIEV----EEVVGRGAFGVVCKAKW-RAKDVAIKQIES----ESERKAFIVEL 53
Query: 334 ATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNS-----SSSIVLSWEK 388
++ + H N+V+L G C N + LV EY GSL +LH +++ +SW
Sbjct: 54 RQLSR-VNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW-- 108
Query: 389 RLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNA-KLGDF--------EATIP 439
L + ++YLH + +IHRD+K N+LL A K+ DF T
Sbjct: 109 ----CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN 164
Query: 440 AGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKKGKL 499
G+ ++APE SEK DV+S+G++ EV + P D G +W + +
Sbjct: 165 KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRP 224
Query: 500 LDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILKGEAXXXXXXVKKPT 559
+ K +E ++ C + +RPS++E +I+
Sbjct: 225 PLIKNL-------PKPIESLMT---RCWSKDPSQRPSMEEIVKIM--------------- 259
Query: 560 VNIRSVFPEASELIDSGGDHS--PGFD 584
++ FP A E + HS PG D
Sbjct: 260 THLMRYFPGADEPLQYPCQHSLPPGED 286
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 135/327 (41%), Gaps = 59/327 (18%)
Query: 274 LALTDIKQATLGFNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEF 333
L + D K+ + +VG GA V K VA+K+ E E R F E
Sbjct: 2 LHMIDYKEIEV----EEVVGRGAFGVVCKAKW-RAKDVAIKQIES----ESERKAFIVEL 52
Query: 334 ATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNS-----SSSIVLSWEK 388
++ + H N+V+L G C N + LV EY GSL +LH +++ +SW
Sbjct: 53 RQLSR-VNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW-- 107
Query: 389 RLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNA-KLGDF--------EATIP 439
L + ++YLH + +IHRD+K N+LL A K+ DF T
Sbjct: 108 ----CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN 163
Query: 440 AGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKKGKL 499
G+ ++APE SEK DV+S+G++ EV + P D G +W + +
Sbjct: 164 KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRP 223
Query: 500 LDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILKGEAXXXXXXVKKPT 559
+ K +E ++ C + +RPS++E +I+
Sbjct: 224 PLIKNL-------PKPIESLMT---RCWSKDPSQRPSMEEIVKIM--------------- 258
Query: 560 VNIRSVFPEASELIDSGGDHS--PGFD 584
++ FP A E + HS PG D
Sbjct: 259 THLMRYFPGADEPLQYPCQHSLPPGED 285
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 130/284 (45%), Gaps = 27/284 (9%)
Query: 268 QRVPMRLALTDIKQATLG-FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA 325
Q P + D+ TL F + +G G + VY+ + L G VA+K+ + + ++
Sbjct: 15 QFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAK 74
Query: 326 RNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLS 385
+ + L H N+++ E NEL +V E G L +++ + ++
Sbjct: 75 ARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIP 134
Query: 386 WEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGD------FEATIP 439
+ + SAL ++H R+++HRD+K N+ + A KLGD F +
Sbjct: 135 ERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 191
Query: 440 A-----GTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLR 494
A GT Y++PE ++ + K+D++S G + E+AA +SP D NL
Sbjct: 192 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK-------MNLY 244
Query: 495 KKGKLLDAADF-RLRGKFNRKEMERMLMVGLSCVHPNHEKRPSV 537
K ++ D+ L +E+ +++ + C++P+ EKRP V
Sbjct: 245 SLCKKIEQCDYPPLPSDHYSEELRQLVNM---CINPDPEKRPDV 285
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 123/298 (41%), Gaps = 51/298 (17%)
Query: 277 TDIKQATLGFN---------KNRIVGEGASATVYKGSLPSGGA-----VAVKRFEKPNRV 322
+D QA L F + +++G G VYKG L + VA+K K
Sbjct: 28 SDPNQAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTL-KAGYT 86
Query: 323 ECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSI 382
E R F E M G H N+++L+G + ++++ EY+ NG+LDK L
Sbjct: 87 EKQRVDFLGEAGIM-GQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFS 145
Query: 383 VLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-------- 434
VL + + ++ G+A+ + YL +HRD+ A NIL+++ K+ DF
Sbjct: 146 VL---QLVGMLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 199
Query: 435 --EATIPAG----TMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVDNDGCVIV 487
EAT + + APE + + +DV+SFG+V EV G+ P
Sbjct: 200 DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP--------- 250
Query: 488 DWVWNLRKKGKLLDAAD-FRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARIL 544
W L + D FRL + LM + C +RP + IL
Sbjct: 251 --YWELSNHEVMKAINDGFRLPTPMDCPSAIYQLM--MQCWQQERARRPKFADIVSIL 304
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 16/152 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+++L G+ + + L+ EY P G + K L S ++ + +A+A
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK----FDEQRTATYITELANA 125
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEY 450
LSY H +++IHRD+K N+LL + K+ DF ++ A GT+ YL PE
Sbjct: 126 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 182
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ + EK D++S GV+ E GK P + +
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 16/152 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+++L G+ + + L+ EY P G + K L S ++ + +A+A
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK----FDEQRTATYITELANA 125
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEY 450
LSY H +++IHRD+K N+LL + K+ DF ++ A GT+ YL PE
Sbjct: 126 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEM 182
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ + EK D++S GV+ E GK P + +
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 16/152 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+++L G+ + + L+ EY P G++ + L S ++ + +A+A
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANA 124
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEY 450
LSY H +++IHRD+K N+LL + K+ DF ++ A GT+ YL PE
Sbjct: 125 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 181
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ + EK D++S GV+ E GK P + +
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 213
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F R +G+G VY S +A+K K + + LRH N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L G+ + + L+ EY P G++ + L S ++ + +A+ALSY H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCH 128
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEYVYSGV 455
+++IHRD+K N+LL + K+ DF ++ A GT+ YL PE + +
Sbjct: 129 S---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRM 185
Query: 456 PSEKTDVYSFGVVALEVAAGKSPVDND 482
EK D++S GV+ E GK P + +
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 78/152 (51%), Gaps = 16/152 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+++L G+ + + L+ EY P G++ + L S ++ + +A+A
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANA 121
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGTMGYLAPEY 450
LSY H +++IHRD+K N+LL + K+ DF T +GT+ YL PE
Sbjct: 122 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEM 178
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ + EK D++S GV+ E GK P + +
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 16/152 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+++L G+ + + L+ EY P G++ + L S ++ + +A+A
Sbjct: 64 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANA 119
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEY 450
LSY H +++IHRD+K N+LL + K+ DF ++ A GT+ YL PE
Sbjct: 120 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 176
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ + EK D++S GV+ E GK P + +
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 208
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 16/152 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+++L G+ + + L+ EY P G++ + L S ++ + +A+A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANA 120
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEY 450
LSY H +++IHRD+K N+LL + K+ DF ++ A GT+ YL PE
Sbjct: 121 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 177
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ + EK D++S GV+ E GK P + +
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 16/152 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+++L G+ + + L+ EY P G++ + L S ++ + +A+A
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANA 123
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEY 450
LSY H +++IHRD+K N+LL + K+ DF ++ A GT+ YL PE
Sbjct: 124 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 180
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ + EK D++S GV+ E GK P + +
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 124/278 (44%), Gaps = 40/278 (14%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G+ TVYKG G VAVK F E + RH N++ G+
Sbjct: 20 IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGY 76
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ +L +V ++ SL LH +S +K ++I A + YLH + I
Sbjct: 77 STKP-QLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLHA---KSI 129
Query: 412 IHRDVKACNILLDAEFNAKLGDFE-ATIP------------AGTMGYLAPEYVY---SGV 455
IHRD+K+ NI L + K+GDF AT+ +G++ ++APE + S
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 189
Query: 456 PSEKTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKE 515
S ++DVY+FG+V E+ G+ P N D + + +G L + D K
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQLPYSNINN--RDQIIEMVGRGSL--SPDLSKVRSNCPKR 245
Query: 516 MERMLMVGLSCVHPNHEKRPS-------VKEAARILKG 546
M+R++ C+ ++RPS ++E AR L G
Sbjct: 246 MKRLMA---ECLKKKRDERPSFPRILAEIEELARELSG 280
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 16/152 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+++L G+ + + L+ EY P G++ + L S ++ + +A+A
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANA 123
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEY 450
LSY H +++IHRD+K N+LL + K+ DF ++ A GT+ YL PE
Sbjct: 124 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 180
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ + EK D++S GV+ E GK P + +
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 16/152 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+++L G+ + + L+ EY P G++ + L S ++ + +A+A
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANA 125
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEY 450
LSY H +++IHRD+K N+LL + K+ DF ++ A GT+ YL PE
Sbjct: 126 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 182
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ + EK D++S GV+ E GK P + +
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F R +G+G VY S +A+K K + + LRH N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L G+ + + L+ EY P G++ + L S ++ + +A+ALSY H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCH 128
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEYVYSGV 455
+++IHRD+K N+LL + K+ DF ++ A GT+ YL PE + +
Sbjct: 129 S---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRM 185
Query: 456 PSEKTDVYSFGVVALEVAAGKSPVDND 482
EK D++S GV+ E GK P + +
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 16/152 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+++L G+ + + L+ EY P G++ + L S ++ + +A+A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANA 120
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEY 450
LSY H +++IHRD+K N+LL + K+ DF ++ A GT+ YL PE
Sbjct: 121 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEM 177
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ + EK D++S GV+ E GK P + +
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 78/150 (52%), Gaps = 16/150 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+++L G+ + + L+ EY P G++ + L S ++ + +A+A
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANA 121
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEY 450
LSY H +++IHRD+K N+LL + K+ DF ++ A GT+ YL PE
Sbjct: 122 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEM 178
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVD 480
+ + EK D++S GV+ E GK P +
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 78/150 (52%), Gaps = 16/150 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+++L G+ + + L+ EY P G++ + L S ++ + +A+A
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANA 121
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEY 450
LSY H +++IHRD+K N+LL + K+ DF ++ A GT+ YL PE
Sbjct: 122 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM 178
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVD 480
+ + EK D++S GV+ E GK P +
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 16/152 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+++L G+ + + L+ EY P G++ + L S ++ + +A+A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANA 120
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEY 450
LSY H +++IHRD+K N+LL + K+ DF ++ A GT+ YL PE
Sbjct: 121 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEM 177
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ + EK D++S GV+ E GK P + +
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 78/150 (52%), Gaps = 16/150 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+++L G+ + + L+ EY P G++ + L S ++ + +A+A
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANA 146
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEY 450
LSY H +++IHRD+K N+LL + K+ DF ++ A GT+ YL PE
Sbjct: 147 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 203
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVD 480
+ + EK D++S GV+ E GK P +
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 78/150 (52%), Gaps = 16/150 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+++L G+ + + L+ EY P G++ + L S ++ + +A+A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANA 120
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEY 450
LSY H +++IHRD+K N+LL + K+ DF ++ A GT+ YL PE
Sbjct: 121 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM 177
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVD 480
+ + EK D++S GV+ E GK P +
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 24/222 (10%)
Query: 271 PMRLALTDIKQATLGFNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPF 329
P + AL D F R +G+G VY S +A+K K +
Sbjct: 2 PRQWALED-------FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 54
Query: 330 TTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKR 389
+ LRH N+++L G+ + + L+ EY P G++ + L S ++
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRT 110
Query: 390 LNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA--------- 440
+ +A+ALSY H +++IHRD+K N+LL + K+ DF ++ A
Sbjct: 111 ATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELC 167
Query: 441 GTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
GT+ YL PE + + EK D++S GV+ E GK P + +
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 16/152 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+++L G+ + + L+ EY P G++ + L S ++ + +A+A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANA 120
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEY 450
LSY H +++IHRD+K N+LL + K+ DF ++ A GT+ YL PE
Sbjct: 121 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEM 177
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ + EK D++S GV+ E GK P + +
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 16/152 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+++L G+ + + L+ EY P G++ + L S ++ + +A+A
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANA 123
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEY 450
LSY H +++IHRD+K N+LL + K+ DF ++ A GT+ YL PE
Sbjct: 124 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEM 180
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ + EK D++S GV+ E GK P + +
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 78/150 (52%), Gaps = 16/150 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+++L G+ + + L+ EY P G++ + L S ++ + +A+A
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANA 125
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEY 450
LSY H +++IHRD+K N+LL + K+ DF ++ A GT+ YL PE
Sbjct: 126 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM 182
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVD 480
+ + EK D++S GV+ E GK P +
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 16/152 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+++L G+ + + L+ EY P G++ + L S ++ + +A+A
Sbjct: 62 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANA 117
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEY 450
LSY H +++IHRD+K N+LL + K+ DF ++ A GT+ YL PE
Sbjct: 118 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 174
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ + EK D++S GV+ E GK P + +
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 206
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 78/150 (52%), Gaps = 16/150 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+++L G+ + + L+ EY P G++ + L S ++ + +A+A
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANA 146
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEY 450
LSY H +++IHRD+K N+LL + K+ DF ++ A GT+ YL PE
Sbjct: 147 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEM 203
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVD 480
+ + EK D++S GV+ E GK P +
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 16/152 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+++L G+ + + L+ EY P G++ + L S ++ + +A+A
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANA 122
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEY 450
LSY H +++IHRD+K N+LL + K+ DF ++ A GT+ YL PE
Sbjct: 123 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEM 179
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ + EK D++S GV+ E GK P + +
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 16/152 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+++L G+ + + L+ EY P G++ + L S ++ + +A+A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANA 120
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEY 450
LSY H +++IHRD+K N+LL + K+ DF ++ A GT+ YL PE
Sbjct: 121 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM 177
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ + EK D++S GV+ E GK P + +
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 16/152 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+++L G+ + + L+ EY P G++ + L S ++ + +A+A
Sbjct: 65 LRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANA 120
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEY 450
LSY H +++IHRD+K N+LL + K+ DF ++ A GT+ YL PE
Sbjct: 121 LSYCHS---KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEM 177
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ + EK D++S GV+ E GK P + +
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 78/150 (52%), Gaps = 16/150 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+++L G+ + + L+ EY P G++ + L S ++ + +A+A
Sbjct: 82 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANA 137
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEY 450
LSY H +++IHRD+K N+LL + K+ DF ++ A GT+ YL PE
Sbjct: 138 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 194
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVD 480
+ + EK D++S GV+ E GK P +
Sbjct: 195 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 18/212 (8%)
Query: 280 KQATL-GFNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMA 337
+Q TL F+ R +G+G VY S +A+K K + +
Sbjct: 7 RQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQ 66
Query: 338 GCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVA 397
LRH N+++L G+ + + L+ EY P G++ + L S ++ + +A
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR----FDEQRTATYITELA 122
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAP 448
+ALSY H +++IHRD+K N+LL + K+ DF ++ A GT+ YL P
Sbjct: 123 NALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPP 179
Query: 449 EYVYSGVPSEKTDVYSFGVVALEVAAGKSPVD 480
E + + EK D++S GV+ E G P +
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 18/212 (8%)
Query: 280 KQATL-GFNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMA 337
+Q TL F+ R +G+G VY S +A+K K + +
Sbjct: 7 RQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQ 66
Query: 338 GCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVA 397
LRH N+++L G+ + + L+ EY P G++ + L S ++ + +A
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR----FDEQRTATYITELA 122
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAP 448
+ALSY H +++IHRD+K N+LL + K+ DF ++ A GT+ YL P
Sbjct: 123 NALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPP 179
Query: 449 EYVYSGVPSEKTDVYSFGVVALEVAAGKSPVD 480
E + + EK D++S GV+ E G P +
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 78/152 (51%), Gaps = 16/152 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+++L G+ + + L+ EY P G++ + L S ++ + +A+A
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANA 125
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEY 450
LSY H +++IHRD+K N+LL + K+ DF ++ A GT+ YL PE
Sbjct: 126 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEX 182
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ EK D++S GV+ E GK P + +
Sbjct: 183 IEGRXHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 121/278 (43%), Gaps = 40/278 (14%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G+ TVYKG G VAVK F E + RH N++ G+
Sbjct: 32 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGY 88
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ +L +V ++ SL LH +S +K ++I A + YLH + I
Sbjct: 89 STK-PQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLHA---KSI 141
Query: 412 IHRDVKACNILLDAEFNAKLGDFEATIP-------------AGTMGYLAPEYVY---SGV 455
IHRD+K+ NI L + K+GDF +G++ ++APE + S
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 456 PSEKTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKE 515
S ++DVY+FG+V E+ G+ P N D + + +G L + D K
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNINN--RDQIIEMVGRGSL--SPDLSKVRSNCPKR 257
Query: 516 MERMLMVGLSCVHPNHEKRPS-------VKEAARILKG 546
M+R++ C+ ++RPS ++E AR L G
Sbjct: 258 MKRLMA---ECLKKKRDERPSFPRILAEIEELARELSG 292
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 117/263 (44%), Gaps = 39/263 (14%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G+ TVYKG G VAVK + + F E A + RH N++ G+
Sbjct: 44 IGSGSFGTVYKGKW--HGDVAVKILKVVDPTPEQFQAFRNEVAVLRKT-RHVNILLFMGY 100
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ N L +V ++ SL K LH + + + ++I A + YLH + I
Sbjct: 101 MTKDN-LAIVTQWCEGSSLYKHLHVQETKFQMF---QLIDIARQTAQGMDYLHA---KNI 153
Query: 412 IHRDVKACNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYVY---SGV 455
IHRD+K+ NI L K+GDF + P G++ ++APE + +
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNP 213
Query: 456 PSEKTDVYSFGVVALEVAAGKSP---VDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFN 512
S ++DVYS+G+V E+ G+ P ++N +I G+ + D K
Sbjct: 214 FSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIF-------MVGRGYASPDLSKLYKNC 266
Query: 513 RKEMERMLMVGLSCVHPNHEKRP 535
K M+R++ CV E+RP
Sbjct: 267 PKAMKRLVA---DCVKKVKEERP 286
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 16/152 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+++L G+ + + L+ EY P G++ + L S ++ + +A+A
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANA 122
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEY 450
LSY H +++IHRD+K N+LL + K+ +F ++ A GT+ YL PE
Sbjct: 123 LSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEM 179
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ + EK D++S GV+ E GK P + +
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 26/221 (11%)
Query: 276 LTDIKQATLGFNKNRIVGEGASATVYKGSLPSGGAVAVKRFEK-PNRVECARNPFTTEFA 334
L +I A L + I+G G VY+ + G VAVK P+ + A
Sbjct: 1 LLEIDFAELTLEE--IIGIGGFGKVYR-AFWIGDEVAVKAARHDPDEDISQTIENVRQEA 57
Query: 335 TMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVL 394
+ L+H N++ L+G C + L LV E+ G L+++L +L +N +
Sbjct: 58 KLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL-----VNWAV 112
Query: 395 GVASALSYLHEECERQIIHRDVKACNILLDAEFN--------AKLGDF---------EAT 437
+A ++YLH+E IIHRD+K+ NIL+ + K+ DF
Sbjct: 113 QIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM 172
Query: 438 IPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
AG ++APE + + + S+ +DV+S+GV+ E+ G+ P
Sbjct: 173 SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 16/152 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+++L G+ + + L+ EY P G++ + L S ++ + +A+A
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANA 123
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEY 450
LSY H +++IHRD+K N+LL + K+ +F ++ A GT+ YL PE
Sbjct: 124 LSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEM 180
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ + EK D++S GV+ E GK P + +
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 137/309 (44%), Gaps = 48/309 (15%)
Query: 256 DGRSKEDHVCTVQRVPMRLALTDIKQATLGFNKNRIVGEGASATVYKG--SLPSGGAVAV 313
D + ED TV L T+I + +++VG G V G LPS ++V
Sbjct: 24 DPHTFEDPTQTVHEFAKELDATNI-------SIDKVVGAGEFGEVCSGRLKLPSKKEISV 76
Query: 314 K-RFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDK 372
+ K E R F E A++ G H N+++L+G + +++V EY+ NGSLD
Sbjct: 77 AIKTLKVGYTEKQRRDFLGE-ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 373 ILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLG 432
L + + V+ + + ++ G+AS + YL + +HRD+ A NIL+++ K+
Sbjct: 136 FLRKHDAQFTVI---QLVGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVS 189
Query: 433 DF----------EA--TIPAGT--MGYLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKS 477
DF EA T G + + +PE + + +DV+S+G+V EV + G+
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 478 PVDNDGCVIVDWVWNLRKKGKLLDAAD--FRLRGKFNRKEMERMLMVGLSCVHPNHEKRP 535
P W + + ++ A D +RL + LM L C + RP
Sbjct: 250 P-----------YWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLM--LDCWQKDRNNRP 295
Query: 536 SVKEAARIL 544
++ IL
Sbjct: 296 KFEQIVSIL 304
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 137/309 (44%), Gaps = 48/309 (15%)
Query: 256 DGRSKEDHVCTVQRVPMRLALTDIKQATLGFNKNRIVGEGASATVYKG--SLPSGGAVAV 313
D + ED TV L T+I + +++VG G V G LPS ++V
Sbjct: 24 DPHTYEDPTQTVHEFAKELDATNI-------SIDKVVGAGEFGEVCSGRLKLPSKKEISV 76
Query: 314 K-RFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDK 372
+ K E R F E A++ G H N+++L+G + +++V EY+ NGSLD
Sbjct: 77 AIKTLKVGYTEKQRRDFLGE-ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 373 ILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLG 432
L + + V+ + + ++ G+AS + YL + +HRD+ A NIL+++ K+
Sbjct: 136 FLRKHDAQFTVI---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 433 DF----------EA--TIPAGT--MGYLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKS 477
DF EA T G + + +PE + + +DV+S+G+V EV + G+
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 478 PVDNDGCVIVDWVWNLRKKGKLLDAAD--FRLRGKFNRKEMERMLMVGLSCVHPNHEKRP 535
P W + + ++ A D +RL + LM L C + RP
Sbjct: 250 P-----------YWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLM--LDCWQKDRNNRP 295
Query: 536 SVKEAARIL 544
++ IL
Sbjct: 296 KFEQIVSIL 304
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 137/309 (44%), Gaps = 48/309 (15%)
Query: 256 DGRSKEDHVCTVQRVPMRLALTDIKQATLGFNKNRIVGEGASATVYKG--SLPSGGAVAV 313
D + ED TV L T+I + +++VG G V G LPS ++V
Sbjct: 24 DPHTYEDPTQTVHEFAKELDATNI-------SIDKVVGAGEFGEVCSGRLKLPSKKEISV 76
Query: 314 K-RFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDK 372
+ K E R F E A++ G H N+++L+G + +++V EY+ NGSLD
Sbjct: 77 AIKTLKVGYTEKQRRDFLGE-ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 373 ILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLG 432
L + + V+ + + ++ G+AS + YL + +HRD+ A NIL+++ K+
Sbjct: 136 FLRKHDAQFTVI---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 433 DF----------EA--TIPAGT--MGYLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKS 477
DF EA T G + + +PE + + +DV+S+G+V EV + G+
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 478 PVDNDGCVIVDWVWNLRKKGKLLDAAD--FRLRGKFNRKEMERMLMVGLSCVHPNHEKRP 535
P W + + ++ A D +RL + LM L C + RP
Sbjct: 250 P-----------YWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLM--LDCWQKDRNNRP 295
Query: 536 SVKEAARIL 544
++ IL
Sbjct: 296 KFEQIVSIL 304
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 137/309 (44%), Gaps = 48/309 (15%)
Query: 256 DGRSKEDHVCTVQRVPMRLALTDIKQATLGFNKNRIVGEGASATVYKG--SLPSGGAVAV 313
D + ED TV L T+I + +++VG G V G LPS ++V
Sbjct: 22 DPHTYEDPTQTVHEFAKELDATNI-------SIDKVVGAGEFGEVCSGRLKLPSKKEISV 74
Query: 314 K-RFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDK 372
+ K E R F E A++ G H N+++L+G + +++V EY+ NGSLD
Sbjct: 75 AIKTLKVGYTEKQRRDFLGE-ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 133
Query: 373 ILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLG 432
L + + V+ + + ++ G+AS + YL + +HRD+ A NIL+++ K+
Sbjct: 134 FLRKHDAQFTVI---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 187
Query: 433 DF----------EA--TIPAGT--MGYLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKS 477
DF EA T G + + +PE + + +DV+S+G+V EV + G+
Sbjct: 188 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 247
Query: 478 PVDNDGCVIVDWVWNLRKKGKLLDAAD--FRLRGKFNRKEMERMLMVGLSCVHPNHEKRP 535
P W + + ++ A D +RL + LM L C + RP
Sbjct: 248 P-----------YWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLM--LDCWQKDRNNRP 293
Query: 536 SVKEAARIL 544
++ IL
Sbjct: 294 KFEQIVSIL 302
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 137/309 (44%), Gaps = 48/309 (15%)
Query: 256 DGRSKEDHVCTVQRVPMRLALTDIKQATLGFNKNRIVGEGASATVYKG--SLPSGGAVAV 313
D + ED TV L T+I + +++VG G V G LPS ++V
Sbjct: 24 DPHTFEDPTQTVHEFAKELDATNI-------SIDKVVGAGEFGEVCSGRLKLPSKKEISV 76
Query: 314 K-RFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDK 372
+ K E R F E A++ G H N+++L+G + +++V EY+ NGSLD
Sbjct: 77 AIKTLKVGYTEKQRRDFLGE-ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 373 ILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLG 432
L + + V+ + + ++ G+AS + YL + +HRD+ A NIL+++ K+
Sbjct: 136 FLRKHDAQFTVI---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 433 DF----------EA--TIPAGT--MGYLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKS 477
DF EA T G + + +PE + + +DV+S+G+V EV + G+
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 478 PVDNDGCVIVDWVWNLRKKGKLLDAAD--FRLRGKFNRKEMERMLMVGLSCVHPNHEKRP 535
P W + + ++ A D +RL + LM L C + RP
Sbjct: 250 P-----------YWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLM--LDCWQKDRNNRP 295
Query: 536 SVKEAARIL 544
++ IL
Sbjct: 296 KFEQIVSIL 304
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 137/309 (44%), Gaps = 48/309 (15%)
Query: 256 DGRSKEDHVCTVQRVPMRLALTDIKQATLGFNKNRIVGEGASATVYKG--SLPSGGAVAV 313
D + ED TV L T+I + +++VG G V G LPS ++V
Sbjct: 24 DPHTFEDPTQTVHEFAKELDATNI-------SIDKVVGAGEFGEVCSGRLKLPSKKEISV 76
Query: 314 K-RFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDK 372
+ K E R F E A++ G H N+++L+G + +++V EY+ NGSLD
Sbjct: 77 AIKTLKVGYTEKQRRDFLGE-ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 373 ILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLG 432
L + + V+ + + ++ G+AS + YL + +HRD+ A NIL+++ K+
Sbjct: 136 FLRKHDAQFTVI---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 433 DF----------EA--TIPAGT--MGYLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKS 477
DF EA T G + + +PE + + +DV+S+G+V EV + G+
Sbjct: 190 DFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 478 PVDNDGCVIVDWVWNLRKKGKLLDAAD--FRLRGKFNRKEMERMLMVGLSCVHPNHEKRP 535
P W + + ++ A D +RL + LM L C + RP
Sbjct: 250 P-----------YWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLM--LDCWQKDRNNRP 295
Query: 536 SVKEAARIL 544
++ IL
Sbjct: 296 KFEQIVSIL 304
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 137/309 (44%), Gaps = 48/309 (15%)
Query: 256 DGRSKEDHVCTVQRVPMRLALTDIKQATLGFNKNRIVGEGASATVYKG--SLPSGGAVAV 313
D + ED TV L T+I + +++VG G V G LPS ++V
Sbjct: 24 DPHTFEDPTQTVHEFAKELDATNI-------SIDKVVGAGEFGEVCSGRLKLPSKKEISV 76
Query: 314 K-RFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDK 372
+ K E R F E A++ G H N+++L+G + +++V EY+ NGSLD
Sbjct: 77 AIKTLKVGYTEKQRRDFLGE-ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 373 ILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLG 432
L + + V+ + + ++ G+AS + YL + +HRD+ A NIL+++ K+
Sbjct: 136 FLRKHDAQFTVI---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 433 DF----------EA--TIPAGT--MGYLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKS 477
DF EA T G + + +PE + + +DV+S+G+V EV + G+
Sbjct: 190 DFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 478 PVDNDGCVIVDWVWNLRKKGKLLDAAD--FRLRGKFNRKEMERMLMVGLSCVHPNHEKRP 535
P W + + ++ A D +RL + LM L C + RP
Sbjct: 250 P-----------YWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLM--LDCWQKDRNNRP 295
Query: 536 SVKEAARIL 544
++ IL
Sbjct: 296 KFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 137/309 (44%), Gaps = 48/309 (15%)
Query: 256 DGRSKEDHVCTVQRVPMRLALTDIKQATLGFNKNRIVGEGASATVYKG--SLPSGGAVAV 313
D + ED TV L T+I + +++VG G V G LPS ++V
Sbjct: 24 DPHTFEDPTQTVHEFAKELDATNI-------SIDKVVGAGEFGEVCSGRLKLPSKKEISV 76
Query: 314 K-RFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDK 372
+ K E R F E A++ G H N+++L+G + +++V EY+ NGSLD
Sbjct: 77 AIKTLKVGYTEKQRRDFLGE-ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 373 ILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLG 432
L + + V+ + + ++ G+AS + YL + +HRD+ A NIL+++ K+
Sbjct: 136 FLRKHDAQFTVI---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 433 DF----------EA--TIPAGT--MGYLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKS 477
DF EA T G + + +PE + + +DV+S+G+V EV + G+
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 478 PVDNDGCVIVDWVWNLRKKGKLLDAAD--FRLRGKFNRKEMERMLMVGLSCVHPNHEKRP 535
P W + + ++ A D +RL + LM L C + RP
Sbjct: 250 P-----------YWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLM--LDCWQKDRNNRP 295
Query: 536 SVKEAARIL 544
++ IL
Sbjct: 296 KFEQIVSIL 304
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 94/203 (46%), Gaps = 23/203 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V+ G + VA+K ++ + E + F E M L H LVQL G
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE---DDFIEEAEVMMK-LSHPKLVQLYGV 90
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
C E + LV+E++ +G L L + + E L + L V ++YL E C +
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEAC---V 144
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
IHRD+ A N L+ K+ DF + T GT + + +PE S K
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 204
Query: 460 TDVYSFGVVALEV-AAGKSPVDN 481
+DV+SFGV+ EV + GK P +N
Sbjct: 205 SDVWSFGVLMWEVFSEGKIPYEN 227
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 104/222 (46%), Gaps = 38/222 (17%)
Query: 289 NRIVGEGASATVYKGSL----PSGGA--VAVKRFEKPNRVECARNPFTTEFATMAGCLRH 342
R +GEGA V+ P+ VAVK + P AR F E A + L+H
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL--AARKDFQRE-AELLTNLQH 76
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIV------------LSWEKRL 390
+++V+ G C +G+ L++V+EY+ +G L+K L + +++ L + L
Sbjct: 77 EHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQML 136
Query: 391 NIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT----------IPA 440
+I +AS + YL + +HRD+ N L+ A K+GDF + +
Sbjct: 137 HIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGG 193
Query: 441 GTM---GYLAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSP 478
TM ++ PE + + ++DV+SFGV+ E+ GK P
Sbjct: 194 HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 26/206 (12%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G+ TVYKG G VAVK F E + RH N++ G+
Sbjct: 32 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGY 88
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+L +V ++ SL LH +S +K ++I A + YLH + I
Sbjct: 89 ST-APQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLHA---KSI 141
Query: 412 IHRDVKACNILLDAEFNAKLGDFEATIP-------------AGTMGYLAPEYVY---SGV 455
IHRD+K+ NI L + K+GDF +G++ ++APE + S
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 456 PSEKTDVYSFGVVALEVAAGKSPVDN 481
S ++DVY+FG+V E+ G+ P N
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSN 227
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 123/278 (44%), Gaps = 45/278 (16%)
Query: 290 RIVGEGASATVYKGSLPSGGA----VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
+++G G V G L G VA+K K E R F +E A++ G H N+
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTL-KSGYTEKQRRDFLSE-ASIMGQFDHPNV 96
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
+ L+G + ++++ E++ NGSLD L N V+ + + ++ G+A+ + YL
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI---QLVGMLRGIAAGMKYL-- 151
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGT--------MGYLAPE 449
+ +HRD+ A NIL+++ K+ DF + + P T + + APE
Sbjct: 152 -ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 210
Query: 450 YVYSGVPSEKTDVYSFGVVALEVAA-GKSPVDNDGCVIVDWVWNLRKKGKLLDA--ADFR 506
+ + +DV+S+G+V EV + G+ P W++ + +++A D+R
Sbjct: 211 AIQYRKFTSASDVWSYGIVMWEVMSYGERP-----------YWDMTNQ-DVINAIEQDYR 258
Query: 507 LRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARIL 544
L + LM L C + RP + L
Sbjct: 259 LPPPMDCPSALHQLM--LDCWQKDRNHRPKFGQIVNTL 294
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 23/203 (11%)
Query: 292 VGEGASATVYKGSLPSGGA-VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+GEG++ V ++ S G VAVK+ + R + R E M +H+N+V++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDL--RKQQRRELLFNEVVIMRD-YQHENVVEMYN 93
Query: 351 WCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQ 410
G+EL +V E+L G+L I+ + ++ E+ + L V ALS LH +
Sbjct: 94 SYLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQG--- 145
Query: 411 IIHRDVKACNILLDAEFNAKLGDF------EATIP-----AGTMGYLAPEYVYSGVPSEK 459
+IHRD+K+ +ILL + KL DF +P GT ++APE + +
Sbjct: 146 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 205
Query: 460 TDVYSFGVVALEVAAGKSPVDND 482
D++S G++ +E+ G+ P N+
Sbjct: 206 VDIWSLGIMVIEMVDGEPPYFNE 228
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 23/203 (11%)
Query: 292 VGEGASATVYKGSLPSGGA-VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+GEG++ V ++ S G VAVK+ + R + R E M +H+N+V++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDL--RKQQRRELLFNEVVIMRDY-QHENVVEMYN 95
Query: 351 WCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQ 410
G+EL +V E+L G+L I+ + ++ E+ + L V ALS LH +
Sbjct: 96 SYLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQG--- 147
Query: 411 IIHRDVKACNILLDAEFNAKLGDF------EATIP-----AGTMGYLAPEYVYSGVPSEK 459
+IHRD+K+ +ILL + KL DF +P GT ++APE + +
Sbjct: 148 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 207
Query: 460 TDVYSFGVVALEVAAGKSPVDND 482
D++S G++ +E+ G+ P N+
Sbjct: 208 VDIWSLGIMVIEMVDGEPPYFNE 230
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 23/203 (11%)
Query: 292 VGEGASATVYKGSLPSGGA-VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+GEG++ V ++ S G VAVK+ + R + R E M +H+N+V++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDL--RKQQRRELLFNEVVIMRDY-QHENVVEMYN 88
Query: 351 WCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQ 410
G+EL +V E+L G+L I+ + ++ E+ + L V ALS LH +
Sbjct: 89 SYLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQG--- 140
Query: 411 IIHRDVKACNILLDAEFNAKLGDF------EATIP-----AGTMGYLAPEYVYSGVPSEK 459
+IHRD+K+ +ILL + KL DF +P GT ++APE + +
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 200
Query: 460 TDVYSFGVVALEVAAGKSPVDND 482
D++S G++ +E+ G+ P N+
Sbjct: 201 VDIWSLGIMVIEMVDGEPPYFNE 223
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 27/209 (12%)
Query: 289 NRIVGEGASATVYKGSLPSGG----AVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
R++G G V G L G AVA+K K E R F E A++ G H N
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTL-KVGYTEKQRRDFLCE-ASIMGQFDHPN 105
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+V L+G G +++V E++ NG+LD L + V+ + + ++ G+A+ + YL
Sbjct: 106 VVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVI---QLVGMLRGIAAGMRYL- 161
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF----------EA--TIPAGTM--GYLAPEY 450
+ +HRD+ A NIL+++ K+ DF EA T G + + APE
Sbjct: 162 --ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEA 219
Query: 451 VYSGVPSEKTDVYSFGVVALEVAA-GKSP 478
+ + +DV+S+G+V EV + G+ P
Sbjct: 220 IQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 23/203 (11%)
Query: 292 VGEGASATVYKGSLPSGGA-VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+GEG++ V ++ S G VAVK+ + R + R E M +H+N+V++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDL--RKQQRRELLFNEVVIMRDY-QHENVVEMYN 84
Query: 351 WCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQ 410
G+EL +V E+L G+L I+ + ++ E+ + L V ALS LH +
Sbjct: 85 SYLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQG--- 136
Query: 411 IIHRDVKACNILLDAEFNAKLGDF------EATIP-----AGTMGYLAPEYVYSGVPSEK 459
+IHRD+K+ +ILL + KL DF +P GT ++APE + +
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 196
Query: 460 TDVYSFGVVALEVAAGKSPVDND 482
D++S G++ +E+ G+ P N+
Sbjct: 197 VDIWSLGIMVIEMVDGEPPYFNE 219
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 23/203 (11%)
Query: 292 VGEGASATVYKGSLPSGGA-VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+GEG++ V ++ S G VAVK+ + R + R E M +H+N+V++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDL--RKQQRRELLFNEVVIMRD-YQHENVVEMYN 215
Query: 351 WCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQ 410
G+EL +V E+L G+L I+ + ++ E+ + L V ALS LH +
Sbjct: 216 SYLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQG--- 267
Query: 411 IIHRDVKACNILLDAEFNAKLGDF------EATIP-----AGTMGYLAPEYVYSGVPSEK 459
+IHRD+K+ +ILL + KL DF +P GT ++APE + +
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 327
Query: 460 TDVYSFGVVALEVAAGKSPVDND 482
D++S G++ +E+ G+ P N+
Sbjct: 328 VDIWSLGIMVIEMVDGEPPYFNE 350
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 23/203 (11%)
Query: 292 VGEGASATVYKGSLPSGGA-VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+GEG++ V ++ S G VAVK+ + R + R E M +H+N+V++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDL--RKQQRRELLFNEVVIMRDY-QHENVVEMYN 138
Query: 351 WCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQ 410
G+EL +V E+L G+L I+ + ++ E+ + L V ALS LH +
Sbjct: 139 SYLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQG--- 190
Query: 411 IIHRDVKACNILLDAEFNAKLGDF------EATIP-----AGTMGYLAPEYVYSGVPSEK 459
+IHRD+K+ +ILL + KL DF +P GT ++APE + +
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 250
Query: 460 TDVYSFGVVALEVAAGKSPVDND 482
D++S G++ +E+ G+ P N+
Sbjct: 251 VDIWSLGIMVIEMVDGEPPYFNE 273
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V+ G + VA+K + E F E M L H LVQL G
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVMMK-LSHPKLVQLYGV 68
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
C E + LV+E++ +G L L + + E L + L V ++YL E C +
Sbjct: 69 CLEQAPICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEAC---V 122
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
IHRD+ A N L+ K+ DF + T GT + + +PE S K
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 182
Query: 460 TDVYSFGVVALEV-AAGKSPVDN 481
+DV+SFGV+ EV + GK P +N
Sbjct: 183 SDVWSFGVLMWEVFSEGKIPYEN 205
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V+ G + VA+K + E F E M L H LVQL G
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVMMK-LSHPKLVQLYGV 73
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
C E + LV+E++ +G L L + + E L + L V ++YL E C +
Sbjct: 74 CLEQAPICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEAC---V 127
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
IHRD+ A N L+ K+ DF + T GT + + +PE S K
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 187
Query: 460 TDVYSFGVVALEV-AAGKSPVDN 481
+DV+SFGV+ EV + GK P +N
Sbjct: 188 SDVWSFGVLMWEVFSEGKIPYEN 210
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 23/203 (11%)
Query: 292 VGEGASATVYKGSLP-SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+GEG++ V + +G VAVK+ + R + R E M H N+V +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDL--RKQQRRELLFNEVVIMRD-YHHDNVVDMYS 109
Query: 351 WCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQ 410
G+EL +V E+L G+L I+ + ++ E+ + L V ALSYLH +
Sbjct: 110 SYLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIATVCLSVLRALSYLHNQG--- 161
Query: 411 IIHRDVKACNILLDAEFNAKLGDF------EATIP-----AGTMGYLAPEYVYSGVPSEK 459
+IHRD+K+ +ILL ++ KL DF +P GT ++APE + +
Sbjct: 162 VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTE 221
Query: 460 TDVYSFGVVALEVAAGKSPVDND 482
D++S G++ +E+ G+ P N+
Sbjct: 222 VDIWSLGIMVIEMIDGEPPYFNE 244
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 26/206 (12%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G+ TVYKG G VAVK F E + RH N++ G+
Sbjct: 43 IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGY 99
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ +L +V ++ SL LH + ++ K ++I A + YLH + I
Sbjct: 100 STKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHA---KSI 152
Query: 412 IHRDVKACNILLDAEFNAKLGDFE-ATIP------------AGTMGYLAPEYVY---SGV 455
IHRD+K+ NI L + K+GDF AT+ +G++ ++APE +
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 212
Query: 456 PSEKTDVYSFGVVALEVAAGKSPVDN 481
S ++DVY+FG+V E+ G+ P N
Sbjct: 213 YSFQSDVYAFGIVLYELMTGQLPYSN 238
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V+ G + VA+K + E F E M L H LVQL G
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVMMK-LSHPKLVQLYGV 70
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
C E + LV+E++ +G L L + + E L + L V ++YL E C +
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEAC---V 124
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
IHRD+ A N L+ K+ DF + T GT + + +PE S K
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 460 TDVYSFGVVALEV-AAGKSPVDN 481
+DV+SFGV+ EV + GK P +N
Sbjct: 185 SDVWSFGVLMWEVFSEGKIPYEN 207
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 126/276 (45%), Gaps = 41/276 (14%)
Query: 289 NRIVGEGASATVYKG--SLPSGGAVAVK-RFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
+++VG G V G LPS ++V + K E R F E A++ G H N+
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE-ASIMGQFDHPNI 79
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
++L+G + +++V EY+ NGSLD L + + V+ + + ++ G+AS + YL
Sbjct: 80 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYL-- 134
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF----------EA--TIPAGT--MGYLAPEYV 451
+ +HRD+ A NIL+++ K+ DF EA T G + + +PE +
Sbjct: 135 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 452 YSGVPSEKTDVYSFGVVALEVAA-GKSPVDNDGCVIVDWVWNLRKKGKLLDAAD--FRLR 508
+ +DV+S+G+V EV + G+ P W + + ++ A D +RL
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMSYGERP-----------YWEMSNQ-DVIKAVDEGYRLP 241
Query: 509 GKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARIL 544
+ LM L C + RP ++ IL
Sbjct: 242 PPMDCPAALYQLM--LDCWQKDRNNRPKFEQIVSIL 275
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 26/206 (12%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G+ TVYKG G VAVK F E + RH N++ G+
Sbjct: 44 IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGY 100
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ +L +V ++ SL LH + ++ K ++I A + YLH + I
Sbjct: 101 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHA---KSI 153
Query: 412 IHRDVKACNILLDAEFNAKLGDFE-ATIP------------AGTMGYLAPEYVY---SGV 455
IHRD+K+ NI L + K+GDF AT+ +G++ ++APE +
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 456 PSEKTDVYSFGVVALEVAAGKSPVDN 481
S ++DVY+FG+V E+ G+ P N
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLPYSN 239
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 26/206 (12%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G+ TVYKG G VAVK F E + RH N++ G+
Sbjct: 21 IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGY 77
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ +L +V ++ SL LH + ++ K ++I A + YLH + I
Sbjct: 78 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHA---KSI 130
Query: 412 IHRDVKACNILLDAEFNAKLGDFE-ATIP------------AGTMGYLAPEYVY---SGV 455
IHRD+K+ NI L + K+GDF AT+ +G++ ++APE +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 456 PSEKTDVYSFGVVALEVAAGKSPVDN 481
S ++DVY+FG+V E+ G+ P N
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLPYSN 216
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 26/206 (12%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G+ TVYKG G VAVK F E + RH N++ G+
Sbjct: 18 IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGY 74
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ +L +V ++ SL LH + ++ K ++I A + YLH + I
Sbjct: 75 STKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHA---KSI 127
Query: 412 IHRDVKACNILLDAEFNAKLGDFE-ATIP------------AGTMGYLAPEYVY---SGV 455
IHRD+K+ NI L + K+GDF AT+ +G++ ++APE +
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 187
Query: 456 PSEKTDVYSFGVVALEVAAGKSPVDN 481
S ++DVY+FG+V E+ G+ P N
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQLPYSN 213
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 26/206 (12%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G+ TVYKG G VAVK F E + RH N++ G+
Sbjct: 21 IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGY 77
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ +L +V ++ SL LH + ++ K ++I A + YLH + I
Sbjct: 78 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHA---KSI 130
Query: 412 IHRDVKACNILLDAEFNAKLGDFE-ATIP------------AGTMGYLAPEYVY---SGV 455
IHRD+K+ NI L + K+GDF AT+ +G++ ++APE +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 456 PSEKTDVYSFGVVALEVAAGKSPVDN 481
S ++DVY+FG+V E+ G+ P N
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLPYSN 216
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 126/276 (45%), Gaps = 41/276 (14%)
Query: 289 NRIVGEGASATVYKG--SLPSGGAVAVK-RFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
+++VG G V G LPS ++V + K E R F E A++ G H N+
Sbjct: 38 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE-ASIMGQFDHPNI 96
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
++L+G + +++V EY+ NGSLD L + + V+ + + ++ G+AS + YL
Sbjct: 97 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYL-- 151
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF----------EA--TIPAGT--MGYLAPEYV 451
+ +HRD+ A NIL+++ K+ DF EA T G + + +PE +
Sbjct: 152 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 210
Query: 452 YSGVPSEKTDVYSFGVVALEVAA-GKSPVDNDGCVIVDWVWNLRKKGKLLDAAD--FRLR 508
+ +DV+S+G+V EV + G+ P W + + ++ A D +RL
Sbjct: 211 AYRKFTSASDVWSYGIVLWEVMSYGERP-----------YWEMSNQ-DVIKAVDEGYRLP 258
Query: 509 GKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARIL 544
+ LM L C + RP ++ IL
Sbjct: 259 PPMDCPAALYQLM--LDCWQKDRNNRPKFEQIVSIL 292
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 30/232 (12%)
Query: 266 TVQ-RVPMRLALTDIKQATLG------FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFE 317
TVQ R P R L + + +L F+ +GEG+ +VYK +G VA+K+
Sbjct: 4 TVQLRNPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVP 63
Query: 318 KPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNN 377
VE E + M C ++V+ G + +L +V EY GS+ I+
Sbjct: 64 ----VESDLQEIIKEISIMQQC-DSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLR 118
Query: 378 SSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF--- 434
+ + L+ ++ I+ L YLH + IHRD+KA NILL+ E +AKL DF
Sbjct: 119 NKT---LTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVA 172
Query: 435 --------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
+ GT ++APE + + D++S G+ A+E+A GK P
Sbjct: 173 GQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 292 VGEGASATV-YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+GEG++ V SG VAVK + R + R E M +H N+V++
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDL--RKQQRRELLFNEVVIMRD-YQHFNVVEMYK 109
Query: 351 WCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQ 410
G EL ++ E+L G+L I+ S + L+ E+ + V AL+YLH +
Sbjct: 110 SYLVGEELWVLMEFLQGGALTDIV-----SQVRLNEEQIATVCEAVLQALAYLHAQG--- 161
Query: 411 IIHRDVKACNILLDAEFNAKLGDF------EATIP-----AGTMGYLAPEYVYSGVPSEK 459
+IHRD+K+ +ILL + KL DF +P GT ++APE + + + +
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATE 221
Query: 460 TDVYSFGVVALEVAAGKSPVDNDGCV 485
D++S G++ +E+ G+ P +D V
Sbjct: 222 VDIWSLGIMVIEMVDGEPPYFSDSPV 247
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 26/206 (12%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G+ TVYKG G VAVK F E + RH N++ G+
Sbjct: 16 IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGY 72
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ +L +V ++ SL LH + ++ K ++I A + YLH + I
Sbjct: 73 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHA---KSI 125
Query: 412 IHRDVKACNILLDAEFNAKLGDFE-ATIP------------AGTMGYLAPEYVY---SGV 455
IHRD+K+ NI L + K+GDF AT+ +G++ ++APE +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 456 PSEKTDVYSFGVVALEVAAGKSPVDN 481
S ++DVY+FG+V E+ G+ P N
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSN 211
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 121/281 (43%), Gaps = 34/281 (12%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
+ ++G GA+A V P VA+KR + + + + E M+ C H N
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRI-NLEKCQTSMDELLKEIQAMSQC-HHPN 74
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGS-LDKILH---NNSSSSIVLSWEKRLNIVLGVASAL 400
+V +EL LV + L GS LD I H S VL I+ V L
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 401 SYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGTMG---------------- 444
YLH+ + IHRDVKA NILL + + ++ DF + T G
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 445 YLAPEYVYSGVPSE-KTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKKGKLLDAA 503
++APE + + K D++SFG+ A+E+A G +P + V + L+ L+
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-LMLTLQNDPPSLETG 250
Query: 504 --DFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAAR 542
D + K+ K +M+ + C+ + EKRP+ E R
Sbjct: 251 VQDKEMLKKYG-KSFRKMISL---CLQKDPEKRPTAAELLR 287
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 26/206 (12%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G+ TVYKG G VAVK F E + RH N++ G+
Sbjct: 16 IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGY 72
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+L +V ++ SL LH + ++ K ++I A + YLH + I
Sbjct: 73 ST-APQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHA---KSI 125
Query: 412 IHRDVKACNILLDAEFNAKLGDFE-ATIP------------AGTMGYLAPEYVY---SGV 455
IHRD+K+ NI L + K+GDF AT+ +G++ ++APE +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 456 PSEKTDVYSFGVVALEVAAGKSPVDN 481
S ++DVY+FG+V E+ G+ P N
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSN 211
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 121/281 (43%), Gaps = 34/281 (12%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
+ ++G GA+A V P VA+KR + + + + E M+ C H N
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN-LEKCQTSMDELLKEIQAMSQC-HHPN 69
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGS-LDKILH---NNSSSSIVLSWEKRLNIVLGVASAL 400
+V +EL LV + L GS LD I H S VL I+ V L
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 401 SYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGTMG---------------- 444
YLH+ + IHRDVKA NILL + + ++ DF + T G
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 445 YLAPEYVYSGVPSE-KTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKKGKLLDAA 503
++APE + + K D++SFG+ A+E+A G +P + V + L+ L+
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-LMLTLQNDPPSLETG 245
Query: 504 --DFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAAR 542
D + K+ K +M+ + C+ + EKRP+ E R
Sbjct: 246 VQDKEMLKKYG-KSFRKMISL---CLQKDPEKRPTAAELLR 282
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G + V+ G VAVK ++ + + + F E A + L+H+ LV+L
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAE-ANLMKQLQHQRLVRLYA- 75
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ ++ EY+ NGSL L + S I L+ K L++ +A ++++ E R
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNY 130
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
IHRD++A NIL+ + K+ DF E T G + + APE + G + K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 191 SDVWSFGILLTEIVTHGRIP 210
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 286 FNKNRIVGEGASATVYKGSLPSGGAVAVKR--FEKPNRVECARNPFTTEFATMAGCLRHK 343
F+ R +G+G VY + + F+ E + E + LRH
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSH-LRHP 74
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
N++++ + + + L+ E+ P G L K L + ++ + +A AL Y
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR----FDEQRSATFMEELADALHYC 130
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEYVYSG 454
HE R++IHRD+K N+L+ + K+ DF ++ A GT+ YL PE +
Sbjct: 131 HE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGK 187
Query: 455 VPSEKTDVYSFGVVALEVAAGKSPVDN 481
EK D++ GV+ E G P D+
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 136/309 (44%), Gaps = 48/309 (15%)
Query: 256 DGRSKEDHVCTVQRVPMRLALTDIKQATLGFNKNRIVGEGASATVYKG--SLPSGGAVAV 313
D + ED TV L T+I + +++VG G V G LPS ++V
Sbjct: 24 DPHTYEDPTQTVHEFAKELDATNI-------SIDKVVGAGEFGEVCSGRLKLPSKKEISV 76
Query: 314 K-RFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDK 372
+ K E R F E A++ G H N+++L+G + +++V E + NGSLD
Sbjct: 77 AIKTLKVGYTEKQRRDFLGE-ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 373 ILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLG 432
L + + V+ + + ++ G+AS + YL + +HRD+ A NIL+++ K+
Sbjct: 136 FLRKHDAQFTVI---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 433 DF----------EA--TIPAGT--MGYLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKS 477
DF EA T G + + +PE + + +DV+S+G+V EV + G+
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 478 PVDNDGCVIVDWVWNLRKKGKLLDAAD--FRLRGKFNRKEMERMLMVGLSCVHPNHEKRP 535
P W + + ++ A D +RL + LM L C + RP
Sbjct: 250 P-----------YWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLM--LDCWQKDRNNRP 295
Query: 536 SVKEAARIL 544
++ IL
Sbjct: 296 KFEQIVSIL 304
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 286 FNKNRIVGEGASATVYKGSLPSGGAVAVKR--FEKPNRVECARNPFTTEFATMAGCLRHK 343
F+ R +G+G VY + + F+ E + E + LRH
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSH-LRHP 75
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
N++++ + + + L+ E+ P G L K L + ++ + +A AL Y
Sbjct: 76 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR----FDEQRSATFMEELADALHYC 131
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEYVYSG 454
HE R++IHRD+K N+L+ + K+ DF ++ A GT+ YL PE +
Sbjct: 132 HE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGK 188
Query: 455 VPSEKTDVYSFGVVALEVAAGKSPVDN 481
EK D++ GV+ E G P D+
Sbjct: 189 THDEKVDLWCAGVLCYEFLVGMPPFDS 215
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 30/214 (14%)
Query: 291 IVGEGASATVYKGSLPSGGA---VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQ 347
++GEG V K + G A+KR ++ + R+ F E + H N++
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD-FAGELEVLCKLGHHPNIIN 90
Query: 348 LQGWCCEGNELVLVYEYLPNGSLDKILHNN------------SSSSIVLSWEKRLNIVLG 395
L G C L L EY P+G+L L + +S++ LS ++ L+
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 396 VASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-----EATIPAGTMG-----Y 445
VA + YL ++Q IHRD+ A NIL+ + AK+ DF + TMG +
Sbjct: 151 VARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRW 207
Query: 446 LAPEYVYSGVPSEKTDVYSFGVVALE-VAAGKSP 478
+A E + V + +DV+S+GV+ E V+ G +P
Sbjct: 208 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 241
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 26/206 (12%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G+ TVYKG G VAVK F E + RH N++ G+
Sbjct: 44 IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGY 100
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ +L +V ++ SL LH + ++ K ++I A + YLH + I
Sbjct: 101 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHA---KSI 153
Query: 412 IHRDVKACNILLDAEFNAKLGDFEATIP-------------AGTMGYLAPEYVY---SGV 455
IHRD+K+ NI L + K+GDF +G++ ++APE +
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 456 PSEKTDVYSFGVVALEVAAGKSPVDN 481
S ++DVY+FG+V E+ G+ P N
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLPYSN 239
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 30/214 (14%)
Query: 291 IVGEGASATVYKGSLPSGGA---VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQ 347
++GEG V K + G A+KR ++ + R+ F E + H N++
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD-FAGELEVLCKLGHHPNIIN 80
Query: 348 LQGWCCEGNELVLVYEYLPNGSLDKILHNN------------SSSSIVLSWEKRLNIVLG 395
L G C L L EY P+G+L L + +S++ LS ++ L+
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 396 VASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-----EATIPAGTMG-----Y 445
VA + YL ++Q IHRD+ A NIL+ + AK+ DF + TMG +
Sbjct: 141 VARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRW 197
Query: 446 LAPEYVYSGVPSEKTDVYSFGVVALE-VAAGKSP 478
+A E + V + +DV+S+GV+ E V+ G +P
Sbjct: 198 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 231
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 26/206 (12%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G+ TVYKG G VAVK F E + RH N++ G+
Sbjct: 36 IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGY 92
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ +L +V ++ SL LH + ++ K ++I A + YLH + I
Sbjct: 93 STKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHA---KSI 145
Query: 412 IHRDVKACNILLDAEFNAKLGDFEATIP-------------AGTMGYLAPEYVY---SGV 455
IHRD+K+ NI L + K+GDF +G++ ++APE +
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 205
Query: 456 PSEKTDVYSFGVVALEVAAGKSPVDN 481
S ++DVY+FG+V E+ G+ P N
Sbjct: 206 YSFQSDVYAFGIVLYELMTGQLPYSN 231
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 27/208 (12%)
Query: 290 RIVGEGASATVYKGSLPSGGA----VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
R++G G V G L G VA+K K E R F E A++ G H N+
Sbjct: 28 RVIGAGEFGEVCSGRLKLPGKRELPVAIKTL-KVGYTEKQRRDFLGE-ASIMGQFDHPNI 85
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
+ L+G + +++V EY+ NGSLD L N V+ + + ++ G+++ + YL
Sbjct: 86 IHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVI---QLVGMLRGISAGMKYL-- 140
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF----------EA--TIPAGT--MGYLAPEYV 451
+ +HRD+ A NIL+++ K+ DF EA T G + + APE +
Sbjct: 141 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 199
Query: 452 YSGVPSEKTDVYSFGVVALEVAA-GKSP 478
+ +DV+S+G+V EV + G+ P
Sbjct: 200 AFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 136/309 (44%), Gaps = 48/309 (15%)
Query: 256 DGRSKEDHVCTVQRVPMRLALTDIKQATLGFNKNRIVGEGASATVYKG--SLPSGGAVAV 313
D + ED TV L T+I + +++VG G V G LPS ++V
Sbjct: 24 DPHTFEDPTQTVHEFAKELDATNI-------SIDKVVGAGEFGEVCSGRLKLPSKKEISV 76
Query: 314 K-RFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDK 372
+ K E R F E A++ G H N+++L+G + +++V E + NGSLD
Sbjct: 77 AIKTLKVGYTEKQRRDFLGE-ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 373 ILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLG 432
L + + V+ + + ++ G+AS + YL + +HRD+ A NIL+++ K+
Sbjct: 136 FLRKHDAQFTVI---QLVGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVS 189
Query: 433 DF----------EA--TIPAGT--MGYLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKS 477
DF EA T G + + +PE + + +DV+S+G+V EV + G+
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 478 PVDNDGCVIVDWVWNLRKKGKLLDAAD--FRLRGKFNRKEMERMLMVGLSCVHPNHEKRP 535
P W + + ++ A D +RL + LM L C + RP
Sbjct: 250 P-----------YWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLM--LDCWQKDRNNRP 295
Query: 536 SVKEAARIL 544
++ IL
Sbjct: 296 KFEQIVSIL 304
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N++++ + + + L+ E+ P G L K L + ++ + +A A
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR----FDEQRSATFMEELADA 126
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEY 450
L Y HE R++IHRD+K N+L+ + K+ DF ++ A GT+ YL PE
Sbjct: 127 LHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEM 183
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
+ EK D++ GV+ E G P D+
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 26/206 (12%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G+ TVYKG G VAVK F E + RH N++ G+
Sbjct: 16 IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGY 72
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ +L +V ++ SL LH + ++ K ++I A + YLH + I
Sbjct: 73 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHA---KSI 125
Query: 412 IHRDVKACNILLDAEFNAKLGDFEATIP-------------AGTMGYLAPEYVY---SGV 455
IHRD+K+ NI L + K+GDF +G++ ++APE +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 456 PSEKTDVYSFGVVALEVAAGKSPVDN 481
S ++DVY+FG+V E+ G+ P N
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSN 211
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 90/203 (44%), Gaps = 23/203 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V+ G + VA+K + E F E M L H LVQL G
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVMMK-LSHPKLVQLYGV 71
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
C E + LV E++ +G L L + + E L + L V ++YL E C +
Sbjct: 72 CLEQAPICLVTEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEAC---V 125
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
IHRD+ A N L+ K+ DF + T GT + + +PE S K
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 185
Query: 460 TDVYSFGVVALEV-AAGKSPVDN 481
+DV+SFGV+ EV + GK P +N
Sbjct: 186 SDVWSFGVLMWEVFSEGKIPYEN 208
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V+ G VAVK ++ + + + F E A + L+H+ LV+L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAE-ANLMKQLQHQRLVRLYA- 75
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ ++ EY+ NGSL L + S I L+ K L++ +A ++++ E R
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNY 130
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
IHRD++A NIL+ + K+ DF E T G + + APE + G + K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 191 SDVWSFGILLTEIVTHGRIP 210
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 23/203 (11%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+G+GAS TVY + +G VA+++ + + + E M ++ N+V
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMREN-KNPNIVNYLD 84
Query: 351 WCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQ 410
G+EL +V EYL GSL ++ + + + + AL +LH Q
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCRECLQALEFLHS---NQ 136
Query: 411 IIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAPEYVYSGVPSEK 459
+IHRD+K+ NILL + + KL DF + + GT ++APE V K
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 196
Query: 460 TDVYSFGVVALEVAAGKSPVDND 482
D++S G++A+E+ G+ P N+
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNE 219
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V+ G VAVK ++ + + + F E A + L+H+ LV+L
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAE-ANLMKQLQHQRLVRLYA- 76
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ ++ EY+ NGSL L + S I L+ K L++ +A ++++ E R
Sbjct: 77 VVTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNY 131
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
IHRD++A NIL+ + K+ DF E T G + + APE + G + K
Sbjct: 132 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 191
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 192 SDVWSFGILLTEIVTHGRIP 211
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 29/209 (13%)
Query: 291 IVGEGASATVYKGSLPSGG----AVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLV 346
++G G V +G L + G VA+K K E R F +E A++ G H N++
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTERQRREFLSE-ASIMGQFEHPNII 80
Query: 347 QLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEE 406
+L+G ++++ E++ NG+LD L N V+ + + ++ G+AS + YL
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLRGIASGMRYL--- 134
Query: 407 CERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGT--------MGYLAPEY 450
E +HRD+ A NIL+++ K+ DF ++ P T + + APE
Sbjct: 135 AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEA 194
Query: 451 VYSGVPSEKTDVYSFGVVALEVAA-GKSP 478
+ + +D +S+G+V EV + G+ P
Sbjct: 195 IAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V+ G VAVK ++ + + + F E A + L+H+ LV+L
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAE-ANLMKQLQHQRLVRLYA- 77
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ ++ EY+ NGSL L + S I L+ K L++ +A ++++ E R
Sbjct: 78 VVTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNY 132
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
IHRD++A NIL+ + K+ DF E T G + + APE + G + K
Sbjct: 133 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 192
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 193 SDVWSFGILLTEIVTHGRIP 212
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 29/209 (13%)
Query: 291 IVGEGASATVYKGSLPSGG----AVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLV 346
++G G V +G L + G VA+K K E R F +E A++ G H N++
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTERQRREFLSE-ASIMGQFEHPNII 78
Query: 347 QLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEE 406
+L+G ++++ E++ NG+LD L N V+ + + ++ G+AS + YL
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLRGIASGMRYL--- 132
Query: 407 CERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGT--------MGYLAPEY 450
E +HRD+ A NIL+++ K+ DF ++ P T + + APE
Sbjct: 133 AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEA 192
Query: 451 VYSGVPSEKTDVYSFGVVALEVAA-GKSP 478
+ + +D +S+G+V EV + G+ P
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V+ G VAVK ++ + + + F E A + L+H+ LV+L
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAE-ANLMKQLQHQRLVRLYAV 84
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ + ++ EY+ NGSL L + S I L+ K L++ +A ++++ E R
Sbjct: 85 VTQ-EPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNY 138
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
IHRD++A NIL+ + K+ DF E T G + + APE + G + K
Sbjct: 139 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 198
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 199 SDVWSFGILLTEIVTHGRIP 218
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 290 RIVGEGASATVYKGSL----PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
R +GEGA V+ P + V + + AR F E A + L+H+++
Sbjct: 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHRE-AELLTNLQHEHI 77
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIV---------LSWEKRLNIVLGV 396
V+ G C EG+ L++V+EY+ +G L+K L + +++ L+ + L+I +
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT----------IPAGTM--- 443
A+ + YL + +HRD+ N L+ K+GDF + + TM
Sbjct: 138 AAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 444 GYLAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSP 478
++ PE + + ++DV+S GVV E+ GK P
Sbjct: 195 RWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V+ G VAVK ++ + + + F E A + L+H+ LV+L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAE-ANLMKQLQHQRLVRLYA- 75
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ ++ EY+ NGSL L + S I L+ K L++ +A ++++ E R
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNY 130
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
IHRD++A NIL+ + K+ DF E T G + + APE + G + K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 191 SDVWSFGILLTEIVTHGRIP 210
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V+ G VAVK ++ + + + F E A + L+H+ LV+L
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAE-ANLMKQLQHQRLVRLYA- 84
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ ++ EY+ NGSL L + S I L+ K L++ +A ++++ E R
Sbjct: 85 VVTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNY 139
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
IHRD++A NIL+ + K+ DF E T G + + APE + G + K
Sbjct: 140 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 199
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 200 SDVWSFGILLTEIVTHGRIP 219
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V+ G VAVK ++ + + + F E A + L+H+ LV+L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAE-ANLMKQLQHQRLVRLYA- 81
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ ++ EY+ NGSL L + S I L+ K L++ +A ++++ E R
Sbjct: 82 VVTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNY 136
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
IHRD++A NIL+ + K+ DF E T G + + APE + G + K
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 197 SDVWSFGILLTEIVTHGRIP 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 23/203 (11%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+G+GAS TVY + +G VA+++ + + + E M ++ N+V
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMREN-KNPNIVNYLD 84
Query: 351 WCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQ 410
G+EL +V EYL GSL ++ + + + + AL +LH Q
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCRECLQALEFLHS---NQ 136
Query: 411 IIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAPEYVYSGVPSEK 459
+IHRD+K+ NILL + + KL DF + + GT ++APE V K
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPK 196
Query: 460 TDVYSFGVVALEVAAGKSPVDND 482
D++S G++A+E+ G+ P N+
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNE 219
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V+ G VAVK ++ + + + F E A + L+H+ LV+L
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAE-ANLMKQLQHQRLVRLYA- 80
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ ++ EY+ NGSL L + S I L+ K L++ +A ++++ E R
Sbjct: 81 VVTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNY 135
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
IHRD++A NIL+ + K+ DF E T G + + APE + G + K
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 195
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 196 SDVWSFGILLTEIVTHGRIP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 23/203 (11%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+G+GAS TVY + +G VA+++ + + + E M ++ N+V
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMREN-KNPNIVNYLD 85
Query: 351 WCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQ 410
G+EL +V EYL GSL ++ + + + + AL +LH Q
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCRECLQALEFLHS---NQ 137
Query: 411 IIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAPEYVYSGVPSEK 459
+IHRD+K+ NILL + + KL DF + + GT ++APE V K
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPK 197
Query: 460 TDVYSFGVVALEVAAGKSPVDND 482
D++S G++A+E+ G+ P N+
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLNE 220
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V+ G VAVK ++ + + + F E A + L+H+ LV+L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAE-ANLMKQLQHQRLVRLYA- 81
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ ++ EY+ NGSL L + S I L+ K L++ +A ++++ E R
Sbjct: 82 VVTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNY 136
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
IHRD++A NIL+ + K+ DF E T G + + APE + G + K
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 197 SDVWSFGILLTEIVTHGRIP 216
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V+ G VAVK ++ + + + F E A + L+H+ LV+L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAE-ANLMKQLQHQRLVRLYA- 75
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ ++ EY+ NGSL L + S I L+ K L++ +A ++++ E R
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNY 130
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
IHRD++A NIL+ + K+ DF E T G + + APE + G + K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 191 SDVWSFGILLTEIVTHGRIP 210
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 27/208 (12%)
Query: 290 RIVGEGASATVYKGSLPSGG----AVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
+++G G V G L G VA+K K + R F +E A++ G H N+
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTL-KAGYTDKQRRDFLSE-ASIMGQFDHPNI 92
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
+ L+G + ++++ EY+ NGSLD L N V+ + + ++ G+ S + YL
Sbjct: 93 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGMLRGIGSGMKYLS- 148
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF----------EA--TIPAGT--MGYLAPEYV 451
+ +HRD+ A NIL+++ K+ DF EA T G + + APE +
Sbjct: 149 --DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 206
Query: 452 YSGVPSEKTDVYSFGVVALEVAA-GKSP 478
+ +DV+S+G+V EV + G+ P
Sbjct: 207 AYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V+ G VAVK ++ + + + F E A + L+H+ LV+L
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAE-ANLMKQLQHQRLVRLYAV 71
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ + ++ EY+ NGSL L + S I L+ K L++ +A ++++ E R
Sbjct: 72 VTQ-EPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNY 125
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
IHRD++A NIL+ + K+ DF E T G + + APE + G + K
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 185
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 186 SDVWSFGILLTEIVTHGRIP 205
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 33/213 (15%)
Query: 287 NKNRIV-GEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
N +R+V G+G VY G L + +A+K E P R P E A + L+HKN
Sbjct: 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIK--EIPERDSRYSQPLHEEIA-LHKHLKHKN 80
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHN-----NSSSSIVLSWEKRLNIVLGVASA 399
+VQ G E + + E +P GSL +L + + + + K+ +
Sbjct: 81 IVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ------ILEG 134
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNA-KLGDFEAT-----------IPAGTMGYLA 447
L YLH + QI+HRD+K N+L++ K+ DF + GT+ Y+A
Sbjct: 135 LKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMA 191
Query: 448 PEYVYSGVP--SEKTDVYSFGVVALEVAAGKSP 478
PE + G + D++S G +E+A GK P
Sbjct: 192 PEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V+ G VAVK ++ + + + F E A + L+H+ LV+L
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAE-ANLMKQLQHQRLVRLYAV 86
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ + ++ EY+ NGSL L + S I L+ K L++ +A ++++ E R
Sbjct: 87 VTQ-EPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNY 140
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
IHRD++A NIL+ + K+ DF E T G + + APE + G + K
Sbjct: 141 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 200
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 201 SDVWSFGILLTEIVTHGRIP 220
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 27/208 (12%)
Query: 290 RIVGEGASATVYKGSLPSGG----AVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
+++G G V G L G VA+K K + R F +E A++ G H N+
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTL-KAGYTDKQRRDFLSE-ASIMGQFDHPNI 77
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
+ L+G + ++++ EY+ NGSLD L N V+ + + ++ G+ S + YL
Sbjct: 78 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGMLRGIGSGMKYLS- 133
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF----------EA--TIPAGT--MGYLAPEYV 451
+ +HRD+ A NIL+++ K+ DF EA T G + + APE +
Sbjct: 134 --DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 191
Query: 452 YSGVPSEKTDVYSFGVVALEVAA-GKSP 478
+ +DV+S+G+V EV + G+ P
Sbjct: 192 AYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 33/213 (15%)
Query: 287 NKNRIV-GEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
N +R+V G+G VY G L + +A+K E P R P E A + L+HKN
Sbjct: 10 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIK--EIPERDSRYSQPLHEEIA-LHKHLKHKN 66
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHN-----NSSSSIVLSWEKRLNIVLGVASA 399
+VQ G E + + E +P GSL +L + + + + K+ +
Sbjct: 67 IVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ------ILEG 120
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNA-KLGDFEAT-----------IPAGTMGYLA 447
L YLH + QI+HRD+K N+L++ K+ DF + GT+ Y+A
Sbjct: 121 LKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMA 177
Query: 448 PEYVYSGVP--SEKTDVYSFGVVALEVAAGKSP 478
PE + G + D++S G +E+A GK P
Sbjct: 178 PEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 27/208 (12%)
Query: 290 RIVGEGASATVYKGSLPSGG----AVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
+++G G V G L G VA+K K + R F +E A++ G H N+
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTL-KAGYTDKQRRDFLSE-ASIMGQFDHPNI 71
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
+ L+G + ++++ EY+ NGSLD L N V+ + + ++ G+ S + YL
Sbjct: 72 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGMLRGIGSGMKYLS- 127
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF----------EA--TIPAGT--MGYLAPEYV 451
+ +HRD+ A NIL+++ K+ DF EA T G + + APE +
Sbjct: 128 --DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 185
Query: 452 YSGVPSEKTDVYSFGVVALEVAA-GKSP 478
+ +DV+S+G+V EV + G+ P
Sbjct: 186 AYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 122/278 (43%), Gaps = 45/278 (16%)
Query: 290 RIVGEGASATVYKGSLPSGGA----VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
+++G G V G L G VA+K K E R F +E A++ G H N+
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTL-KSGYTEKQRRDFLSE-ASIMGQFDHPNV 70
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
+ L+G + ++++ E++ NGSLD L N V+ + + ++ G+A+ + YL
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI---QLVGMLRGIAAGMKYL-- 125
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGT--------MGYLAPE 449
+ +HR + A NIL+++ K+ DF + + P T + + APE
Sbjct: 126 -ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 184
Query: 450 YVYSGVPSEKTDVYSFGVVALEVAA-GKSPVDNDGCVIVDWVWNLRKKGKLLDA--ADFR 506
+ + +DV+S+G+V EV + G+ P W++ + +++A D+R
Sbjct: 185 AIQYRKFTSASDVWSYGIVMWEVMSYGERP-----------YWDMTNQ-DVINAIEQDYR 232
Query: 507 LRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARIL 544
L + LM L C + RP + L
Sbjct: 233 LPPPMDCPSALHQLM--LDCWQKDRNHRPKFGQIVNTL 268
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 23/203 (11%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+G+GAS TVY + +G VA+++ + + + E M ++ N+V
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMREN-KNPNIVNYLD 84
Query: 351 WCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQ 410
G+EL +V EYL GSL ++ + + + + AL +LH Q
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCRECLQALEFLHS---NQ 136
Query: 411 IIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAPEYVYSGVPSEK 459
+IHRD+K+ NILL + + KL DF + + GT ++APE V K
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPK 196
Query: 460 TDVYSFGVVALEVAAGKSPVDND 482
D++S G++A+E+ G+ P N+
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNE 219
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 30/214 (14%)
Query: 291 IVGEGASATVYKGSLPSGGA---VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQ 347
++GEG V K + G A+KR ++ + R+ F E + H N++
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD-FAGELEVLCKLGHHPNIIN 87
Query: 348 LQGWCCEGNELVLVYEYLPNGSLDKILHNN------------SSSSIVLSWEKRLNIVLG 395
L G C L L EY P+G+L L + +S++ LS ++ L+
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 396 VASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-----EATIPAGTMG-----Y 445
VA + YL ++Q IHR++ A NIL+ + AK+ DF + TMG +
Sbjct: 148 VARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRW 204
Query: 446 LAPEYVYSGVPSEKTDVYSFGVVALE-VAAGKSP 478
+A E + V + +DV+S+GV+ E V+ G +P
Sbjct: 205 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 238
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 125/276 (45%), Gaps = 41/276 (14%)
Query: 289 NRIVGEGASATVYKG--SLPSGGAVAVK-RFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
+++VG G V G LPS ++V + K E R F E A++ G H N+
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE-ASIMGQFDHPNI 79
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
++L+G + +++V E + NGSLD L + + V+ + + ++ G+AS + YL
Sbjct: 80 IRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYL-- 134
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF----------EA--TIPAGT--MGYLAPEYV 451
+ +HRD+ A NIL+++ K+ DF EA T G + + +PE +
Sbjct: 135 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 452 YSGVPSEKTDVYSFGVVALEVAA-GKSPVDNDGCVIVDWVWNLRKKGKLLDAAD--FRLR 508
+ +DV+S+G+V EV + G+ P W + + ++ A D +RL
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMSYGERP-----------YWEMSNQ-DVIKAVDEGYRLP 241
Query: 509 GKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARIL 544
+ LM L C + RP ++ IL
Sbjct: 242 PPMDCPAALYQLM--LDCWQKDRNNRPKFEQIVSIL 275
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 109/228 (47%), Gaps = 26/228 (11%)
Query: 267 VQRVPMRLALTDIKQATLGFNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECA 325
++++ + +++ D K+ F K +G+GAS TVY + +G VA+++ + +
Sbjct: 7 LEKLRIIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-- 61
Query: 326 RNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLS 385
+ E M ++ N+V G+EL +V EYL GSL ++ + +
Sbjct: 62 KELIINEILVMREN-KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETCMD 115
Query: 386 WEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF----------- 434
+ + AL +LH Q+IHR++K+ NILL + + KL DF
Sbjct: 116 EGQIAAVCRECLQALEFLHS---NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQS 172
Query: 435 EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ + GT ++APE V K D++S G++A+E+ G+ P N+
Sbjct: 173 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE 220
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F ++G+G+ A VY+ S+ +G VA+K +K + + L+H +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L + + N + LV E NG +++ L N S + + + + + + YLH
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKP---FSENEARHFMHQIITGMLYLH 129
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF----EATIP-------AGTMGYLAPEYVYS 453
I+HRD+ N+LL N K+ DF + +P GT Y++PE
Sbjct: 130 SH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATR 186
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDND 482
++DV+S G + + G+ P D D
Sbjct: 187 SAHGLESDVWSLGCMFYTLLIGRPPFDTD 215
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 90/203 (44%), Gaps = 23/203 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V+ G + VA+K + E F E M L H LVQL G
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVMMK-LSHPKLVQLYGV 70
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
C E + LV+E++ +G L L + + E L + L V ++YL E +
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEA---SV 124
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
IHRD+ A N L+ K+ DF + T GT + + +PE S K
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 460 TDVYSFGVVALEV-AAGKSPVDN 481
+DV+SFGV+ EV + GK P +N
Sbjct: 185 SDVWSFGVLMWEVFSEGKIPYEN 207
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 16/203 (7%)
Query: 286 FNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
F K +G G V+K S G V ++ RN E + C +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYI 66
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
V G E+ + E++ GSLD++L + + + + V L+YL E
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLRE 122
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGTMGYLAPEYVYSGVP 456
+ +I+HRDVK NIL+++ KL DF A GT Y++PE +
Sbjct: 123 K--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY 180
Query: 457 SEKTDVYSFGVVALEVAAGKSPV 479
S ++D++S G+ +E+A G+ P+
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 16/203 (7%)
Query: 286 FNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
F K +G G V+K S G V ++ RN E + C +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYI 66
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
V G E+ + E++ GSLD++L + + + + V L+YL E
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLRE 122
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGTMGYLAPEYVYSGVP 456
+ +I+HRDVK NIL+++ KL DF A GT Y++PE +
Sbjct: 123 K--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY 180
Query: 457 SEKTDVYSFGVVALEVAAGKSPV 479
S ++D++S G+ +E+A G+ P+
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 16/203 (7%)
Query: 286 FNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
F K +G G V+K S G V ++ RN E + C +
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYI 85
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
V G E+ + E++ GSLD++L + + + + V L+YL E
Sbjct: 86 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLRE 141
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGTMGYLAPEYVYSGVP 456
+ +I+HRDVK NIL+++ KL DF A GT Y++PE +
Sbjct: 142 K--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY 199
Query: 457 SEKTDVYSFGVVALEVAAGKSPV 479
S ++D++S G+ +E+A G+ P+
Sbjct: 200 SVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 16/203 (7%)
Query: 286 FNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
F K +G G V+K S G V ++ RN E + C +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYI 66
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
V G E+ + E++ GSLD++L + + + + V L+YL E
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLRE 122
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGTMGYLAPEYVYSGVP 456
+ +I+HRDVK NIL+++ KL DF A GT Y++PE +
Sbjct: 123 K--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY 180
Query: 457 SEKTDVYSFGVVALEVAAGKSPV 479
S ++D++S G+ +E+A G+ P+
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 31/207 (14%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECARNPF--TTEFATMAGCLRH 342
K +++G G TV+KG +P G ++ + K + R F T+ G L H
Sbjct: 15 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 74
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGS-LDKILHNNSSSSIVLSWEKRLNIVLGVASALS 401
++V+L G C G+ L LV +YLP GS LD + + + L + LN + +A +
Sbjct: 75 AHIVRLLG-LCPGSSLQLVTQYLPLGSLLDHVRQHRGA----LGPQLLLNWGVQIAKGMY 129
Query: 402 YLHEECERQIIHRDVKACNILLDAEFNAKLGDF----------------EATIPAGTMGY 445
YL E ++HR++ A N+LL + ++ DF EA P + +
Sbjct: 130 YLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP---IKW 183
Query: 446 LAPEYVYSGVPSEKTDVYSFGVVALEV 472
+A E ++ G + ++DV+S+GV E+
Sbjct: 184 MALESIHFGKYTHQSDVWSYGVTVWEL 210
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 16/203 (7%)
Query: 286 FNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
F K +G G V+K S G V ++ RN E + C +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYI 66
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
V G E+ + E++ GSLD++L + + + + V L+YL E
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLRE 122
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGTMGYLAPEYVYSGVP 456
+ +I+HRDVK NIL+++ KL DF A GT Y++PE +
Sbjct: 123 K--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY 180
Query: 457 SEKTDVYSFGVVALEVAAGKSPV 479
S ++D++S G+ +E+A G+ P+
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 16/203 (7%)
Query: 286 FNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
F K +G G V+K S G V ++ RN E + C +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYI 66
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
V G E+ + E++ GSLD++L + + + + V L+YL E
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLRE 122
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGTMGYLAPEYVYSGVP 456
+ +I+HRDVK NIL+++ KL DF A GT Y++PE +
Sbjct: 123 K--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY 180
Query: 457 SEKTDVYSFGVVALEVAAGKSPV 479
S ++D++S G+ +E+A G+ P+
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 29/206 (14%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECARNPF--TTEFATMAGCLRH 342
K +++G G TV+KG +P G ++ + K + R F T+ G L H
Sbjct: 33 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 92
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
++V+L G C G+ L LV +YLP GSL L + L + LN + +A + Y
Sbjct: 93 AHIVRLLG-LCPGSSLQLVTQYLPLGSL---LDHVRQHRGALGPQLLLNWGVQIAKGMYY 148
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDF----------------EATIPAGTMGYL 446
L E ++HR++ A N+LL + ++ DF EA P + ++
Sbjct: 149 LEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP---IKWM 202
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEV 472
A E ++ G + ++DV+S+GV E+
Sbjct: 203 ALESIHFGKYTHQSDVWSYGVTVWEL 228
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 16/203 (7%)
Query: 286 FNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
F K +G G V+K S G V ++ RN E + C +
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYI 93
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
V G E+ + E++ GSLD++L + + + + V L+YL E
Sbjct: 94 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLRE 149
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGTMGYLAPEYVYSGVP 456
+ +I+HRDVK NIL+++ KL DF A GT Y++PE +
Sbjct: 150 K--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY 207
Query: 457 SEKTDVYSFGVVALEVAAGKSPV 479
S ++D++S G+ +E+A G+ P+
Sbjct: 208 SVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V+ G VAVK ++ + + + F E A + L+H+ LV+L
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAE-ANLMKQLQHQRLVRLYAV 72
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ + ++ EY+ NGSL L + S I L+ K L++ +A ++++ E R
Sbjct: 73 VTQ-EPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNY 126
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
IHR+++A NIL+ + K+ DF E T G + + APE + G + K
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 186
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 187 SDVWSFGILLTEIVTHGRIP 206
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 22/149 (14%)
Query: 340 LRHKNLVQLQGWCCE--GNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVA 397
L H+N+V+ +G C E GN + L+ E+LP+GSL + L N + ++ +++L + +
Sbjct: 80 LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQLKYAVQIC 136
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT--------------M 443
+ YL RQ +HRD+ A N+L+++E K+GDF T T +
Sbjct: 137 KGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV 193
Query: 444 GYLAPEYVYSGVPSEKTDVYSFGVVALEV 472
+ APE + +DV+SFGV E+
Sbjct: 194 FWYAPECLMQSKFYIASDVWSFGVTLHEL 222
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 16/203 (7%)
Query: 286 FNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
F K +G G V+K S G V ++ RN E + C +
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYI 128
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
V G E+ + E++ GSLD++L + + + + V L+YL E
Sbjct: 129 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLRE 184
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGTMGYLAPEYVYSGVP 456
+ +I+HRDVK NIL+++ KL DF A GT Y++PE +
Sbjct: 185 K--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY 242
Query: 457 SEKTDVYSFGVVALEVAAGKSPV 479
S ++D++S G+ +E+A G+ P+
Sbjct: 243 SVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 22/149 (14%)
Query: 340 LRHKNLVQLQGWCCE--GNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVA 397
L H+N+V+ +G C E GN + L+ E+LP+GSL + L N + ++ +++L + +
Sbjct: 68 LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQLKYAVQIC 124
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT--------------M 443
+ YL RQ +HRD+ A N+L+++E K+GDF T T +
Sbjct: 125 KGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV 181
Query: 444 GYLAPEYVYSGVPSEKTDVYSFGVVALEV 472
+ APE + +DV+SFGV E+
Sbjct: 182 FWYAPECLMQSKFYIASDVWSFGVTLHEL 210
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 91/217 (41%), Gaps = 34/217 (15%)
Query: 291 IVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
++G+G K + G V V + E E + F E M CL H N+++ G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMK-ELIRFDEETQRTFLKEVKVMR-CLEHPNVLKFIG 74
Query: 351 WCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQ 410
+ L + EY+ G+L I+ + S W +R++ +AS ++YLH
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDSQ---YPWSQRVSFAKDIASGMAYLHS---MN 128
Query: 411 IIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMG-----------------Y 445
IIHRD+ + N L+ N + DF E T P G +
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYW 188
Query: 446 LAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+APE + EK DV+SFG+V E+ G+ D D
Sbjct: 189 MAPEMINGRSYDEKVDVFSFGIVLCEI-IGRVNADPD 224
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 94/203 (46%), Gaps = 29/203 (14%)
Query: 290 RIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEF----ATMAGCLRHKNL 345
+ +G+G V G G VAVK C +N T + A++ LRH NL
Sbjct: 18 QTIGKGEFGDVMLGDY-RGNKVAVK---------CIKNDATAQAFLAEASVMTQLRHSNL 67
Query: 346 VQLQGWCCE-GNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
VQL G E L +V EY+ GSL L + S VL + L L V A+ YL
Sbjct: 68 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS--VLGGDCLLKFSLDVCEAMEYLE 125
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT--------MGYLAPEYVYSGVP 456
+HRD+ A N+L+ + AK+ DF T A + + + APE +
Sbjct: 126 G---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAF 182
Query: 457 SEKTDVYSFGVVALEVAA-GKSP 478
S K+DV+SFG++ E+ + G+ P
Sbjct: 183 STKSDVWSFGILLWEIYSFGRVP 205
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 18/214 (8%)
Query: 274 LALTDIKQATLGFNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEF 333
+AL ++K F K +G G V+K S G V ++ RN E
Sbjct: 1 MALGELKDDD--FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIREL 58
Query: 334 ATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIV 393
+ C +V G E+ + E++ GSLD++L + + +
Sbjct: 59 QVLHEC-NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVS 113
Query: 394 LGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGTMG 444
+ V L+YL E+ +I+HRDVK NIL+++ KL DF A GT
Sbjct: 114 IAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRS 171
Query: 445 YLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
Y++PE + S ++D++S G+ +E+A G+ P
Sbjct: 172 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 36/232 (15%)
Query: 271 PMRLALTDIKQATLGFNKNRIVGEGASATVYKGS-LPSGGAV----AVKRFEKPNRVECA 325
P + L +K+ L + +++G GA TVYKG +P G V A+K + + A
Sbjct: 4 PNQAQLRILKETEL--KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPK-A 60
Query: 326 RNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSI 382
F E MA + H +LV+L G C + LV + +P+G L + +H +N S +
Sbjct: 61 NVEFMDEALIMAS-MDHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQL 118
Query: 383 VLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-------- 434
+L+W + +A + YL E R+++HRD+ A N+L+ + + K+ DF
Sbjct: 119 LLNW------CVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 169
Query: 435 ---EATIPAGTM--GYLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
E G M ++A E ++ + ++DV+S+GV E+ G P D
Sbjct: 170 DEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 22/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V+ G + VAVK KP + F E A + L+H LV+L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSV--QAFLEE-ANLMKTLQHDKLVRLYAV 76
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ ++ EY+ GSL L ++ ++L K ++ +A ++Y+ +
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIER---KNY 131
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
IHRD++A N+L+ K+ DF E T G + + APE + G + K
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 191
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ GK P
Sbjct: 192 SDVWSFGILLYEIVTYGKIP 211
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 36/232 (15%)
Query: 271 PMRLALTDIKQATLGFNKNRIVGEGASATVYKGS-LPSGGAV----AVKRFEKPNRVECA 325
P + L +K+ L + +++G GA TVYKG +P G V A+K + + A
Sbjct: 27 PNQAQLRILKETEL--KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPK-A 83
Query: 326 RNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSI 382
F E MA + H +LV+L G C + LV + +P+G L + +H +N S +
Sbjct: 84 NVEFMDEALIMAS-MDHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQL 141
Query: 383 VLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-------- 434
+L+W + +A + YL E R+++HRD+ A N+L+ + + K+ DF
Sbjct: 142 LLNW------CVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 192
Query: 435 ---EATIPAGTM--GYLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
E G M ++A E ++ + ++DV+S+GV E+ G P D
Sbjct: 193 DEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F+ R +G G+ VY + + VA+K+ + + + LRH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKI-LHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
+Q +G + LV EY + D + +H + ++ + G L+YL
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-----AVTHGALQGLAYL 131
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF-EATIPA------GTMGYLAPEYVYS--- 453
H +IHRDVKA NILL KLGDF A+I A GT ++APE + +
Sbjct: 132 HS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDE 188
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDN 481
G K DV+S G+ +E+A K P+ N
Sbjct: 189 GQYDGKVDVWSLGITCIELAERKPPLFN 216
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 16/203 (7%)
Query: 286 FNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
F + +G G V K G + ++ RN E + C +
Sbjct: 18 FERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYI 76
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
V G E+ + E++ GSLD++L + E + + V L+YL E
Sbjct: 77 VGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR----IPEEILGKVSIAVLRGLAYLRE 132
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGTMGYLAPEYVYSGVP 456
+ QI+HRDVK NIL+++ KL DF A GT Y+APE +
Sbjct: 133 K--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHY 190
Query: 457 SEKTDVYSFGVVALEVAAGKSPV 479
S ++D++S G+ +E+A G+ P+
Sbjct: 191 SVQSDIWSMGLSLVELAVGRYPI 213
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F+ R +G G+ VY + + VA+K+ + + + LRH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKI-LHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
+Q +G + LV EY + D + +H + ++ + G L+YL
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-----AVTHGALQGLAYL 170
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF-EATIPA------GTMGYLAPEYVYS--- 453
H +IHRDVKA NILL KLGDF A+I A GT ++APE + +
Sbjct: 171 HSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDE 227
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDN 481
G K DV+S G+ +E+A K P+ N
Sbjct: 228 GQYDGKVDVWSLGITCIELAERKPPLFN 255
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 94/203 (46%), Gaps = 29/203 (14%)
Query: 290 RIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEF----ATMAGCLRHKNL 345
+ +G+G V G G VAVK C +N T + A++ LRH NL
Sbjct: 27 QTIGKGEFGDVMLGDY-RGNKVAVK---------CIKNDATAQAFLAEASVMTQLRHSNL 76
Query: 346 VQLQGWCCE-GNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
VQL G E L +V EY+ GSL L + S VL + L L V A+ YL
Sbjct: 77 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS--VLGGDCLLKFSLDVCEAMEYLE 134
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT--------MGYLAPEYVYSGVP 456
+HRD+ A N+L+ + AK+ DF T A + + + APE +
Sbjct: 135 GN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKF 191
Query: 457 SEKTDVYSFGVVALEVAA-GKSP 478
S K+DV+SFG++ E+ + G+ P
Sbjct: 192 STKSDVWSFGILLWEIYSFGRVP 214
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 94/203 (46%), Gaps = 29/203 (14%)
Query: 290 RIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEF----ATMAGCLRHKNL 345
+ +G+G V G G VAVK C +N T + A++ LRH NL
Sbjct: 12 QTIGKGEFGDVMLGDY-RGNKVAVK---------CIKNDATAQAFLAEASVMTQLRHSNL 61
Query: 346 VQLQGWCCE-GNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
VQL G E L +V EY+ GSL L + S VL + L L V A+ YL
Sbjct: 62 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS--VLGGDCLLKFSLDVCEAMEYLE 119
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT--------MGYLAPEYVYSGVP 456
+HRD+ A N+L+ + AK+ DF T A + + + APE +
Sbjct: 120 GN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKF 176
Query: 457 SEKTDVYSFGVVALEVAA-GKSP 478
S K+DV+SFG++ E+ + G+ P
Sbjct: 177 STKSDVWSFGILLWEIYSFGRVP 199
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 37/218 (16%)
Query: 292 VGEGASATVYKGS----LPSGGA--VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
+GEGA V+ LP VAVK ++ + E AR F E A + L+H+++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS--ESARQDFQRE-AELLTMLQHQHI 82
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLS-----------WEKRLNIVL 394
V+ G C EG L++V+EY+ +G L++ L ++ + +L+ + L +
Sbjct: 83 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 142
Query: 395 GVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT----------IPAGTM- 443
VA+ + YL +HRD+ N L+ K+GDF + + TM
Sbjct: 143 QVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 444 --GYLAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSP 478
++ PE + + ++DV+SFGVV E+ GK P
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 37/218 (16%)
Query: 292 VGEGASATVYKGS----LPSGGA--VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
+GEGA V+ LP VAVK ++ + E AR F E A + L+H+++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS--ESARQDFQRE-AELLTMLQHQHI 76
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLS-----------WEKRLNIVL 394
V+ G C EG L++V+EY+ +G L++ L ++ + +L+ + L +
Sbjct: 77 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 136
Query: 395 GVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT----------IPAGTM- 443
VA+ + YL +HRD+ N L+ K+GDF + + TM
Sbjct: 137 QVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 444 --GYLAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSP 478
++ PE + + ++DV+SFGVV E+ GK P
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 20/204 (9%)
Query: 286 FNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
F K +G+G+ V+KG V + E E ++ C +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSSYV 83
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
+ G +G++L ++ EYL GS +L ++ ++ + L YLH
Sbjct: 84 TKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIA-----TMLKEILKGLDYLHS 138
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAPEYVYSG 454
E + IHRD+KA N+LL + + KL DF + GT ++APE +
Sbjct: 139 EKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQS 195
Query: 455 VPSEKTDVYSFGVVALEVAAGKSP 478
K D++S G+ A+E+A G+ P
Sbjct: 196 AYDSKADIWSLGITAIELAKGEPP 219
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 94/203 (46%), Gaps = 29/203 (14%)
Query: 290 RIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEF----ATMAGCLRHKNL 345
+ +G+G V G G VAVK C +N T + A++ LRH NL
Sbjct: 199 QTIGKGEFGDVMLGDY-RGNKVAVK---------CIKNDATAQAFLAEASVMTQLRHSNL 248
Query: 346 VQLQGWCCE-GNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
VQL G E L +V EY+ GSL L + S VL + L L V A+ YL
Sbjct: 249 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS--VLGGDCLLKFSLDVCEAMEYLE 306
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT--------MGYLAPEYVYSGVP 456
+HRD+ A N+L+ + AK+ DF T A + + + APE +
Sbjct: 307 G---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKF 363
Query: 457 SEKTDVYSFGVVALEVAA-GKSP 478
S K+DV+SFG++ E+ + G+ P
Sbjct: 364 STKSDVWSFGILLWEIYSFGRVP 386
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 37/218 (16%)
Query: 292 VGEGASATVYKGS----LPSGGA--VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
+GEGA V+ LP VAVK ++ + E AR F E A + L+H+++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS--ESARQDFQRE-AELLTMLQHQHI 105
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLS-----------WEKRLNIVL 394
V+ G C EG L++V+EY+ +G L++ L ++ + +L+ + L +
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 165
Query: 395 GVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT----------IPAGTM- 443
VA+ + YL +HRD+ N L+ K+GDF + + TM
Sbjct: 166 QVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
Query: 444 --GYLAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSP 478
++ PE + + ++DV+SFGVV E+ GK P
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 26/204 (12%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+GA VYK GA+A + + + E + E +A C H +V+L G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIE-TKSEEELEDYIVEIEILATC-DHPYIVKLLGA 76
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVL-GVASALSYLHEECERQ 410
+L ++ E+ P G++D I+ E ++ +V + AL++LH ++
Sbjct: 77 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLT----EPQIQVVCRQMLEALNFLHS---KR 129
Query: 411 IIHRDVKACNILLDAEFNAKLGDFEATIP-----------AGTMGYLAPEYVYSGVPSE- 458
IIHRD+KA N+L+ E + +L DF + GT ++APE V +
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 189
Query: 459 ----KTDVYSFGVVALEVAAGKSP 478
K D++S G+ +E+A + P
Sbjct: 190 PYDYKADIWSLGITLIEMAQIEPP 213
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 286 FNKNRIVGEGA-SATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F +I+GEG+ S TV L + A+K EK + ++ + P+ T + L H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
V+L + +L Y NG L K + S + IV SAL YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 147
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYV 451
+ IIHRD+K NILL+ + + ++ DF A GT Y++PE +
Sbjct: 148 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 452 YSGVPSEKTDVYSFGVVALEVAAGKSP 478
+ +D+++ G + ++ AG P
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 26/204 (12%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+GA VYK GA+A + + + E + E +A C H +V+L G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIE-TKSEEELEDYIVEIEILATC-DHPYIVKLLGA 84
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVL-GVASALSYLHEECERQ 410
+L ++ E+ P G++D I+ E ++ +V + AL++LH ++
Sbjct: 85 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLT----EPQIQVVCRQMLEALNFLHS---KR 137
Query: 411 IIHRDVKACNILLDAEFNAKLGDFEATIP-----------AGTMGYLAPEYVYSGVPSE- 458
IIHRD+KA N+L+ E + +L DF + GT ++APE V +
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 197
Query: 459 ----KTDVYSFGVVALEVAAGKSP 478
K D++S G+ +E+A + P
Sbjct: 198 PYDYKADIWSLGITLIEMAQIEPP 221
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F +I+GEG+ +TV L + A+K EK + ++ + P+ T + L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
V+L + +L Y NG L K + S + IV SAL YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 149
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYV 451
+ IIHRD+K NILL+ + + ++ DF A GT Y++PE +
Sbjct: 150 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 452 YSGVPSEKTDVYSFGVVALEVAAGKSP--VDNDGCVIVDWV 490
+ +D+++ G + ++ AG P N+G + +
Sbjct: 207 TEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKII 247
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVK-RFEKPNRVECARNPFTTEFATMAGCLRHK 343
F R +G+G VY S VA+K F+ E + E A L H
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAH-LHHP 83
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
N+++L + + + L+ EY P G L K L S ++ I+ +A AL Y
Sbjct: 84 NILRLYNYFYDRRRIYLILEYAPRGELYKEL----QKSCTFDEQRTATIMEELADALMYC 139
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA---------GTMGYLAPEYVYSG 454
H +++IHRD+K N+LL + K+ DF ++ A GT+ YL PE +
Sbjct: 140 HG---KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGR 196
Query: 455 VPSEKTDVYSFGVVALEVAAGKSPVDN 481
+ +EK D++ GV+ E+ G P ++
Sbjct: 197 MHNEKVDLWCIGVLCYELLVGNPPFES 223
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 118/265 (44%), Gaps = 45/265 (16%)
Query: 311 VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSL 370
VAVK + + + +E M+ +H+N+V L G C G ++++ EY G L
Sbjct: 79 VAVKMLKSTAHAD-EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 371 -------DKILHNNSSSSI---VLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACN 420
++L + + +I LS L+ VA +++L + IHRDV A N
Sbjct: 138 LNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARN 194
Query: 421 ILLDAEFNAKLGDF----------------EATIPAGTMGYLAPEYVYSGVPSEKTDVYS 464
+LL AK+GDF A +P + ++APE ++ V + ++DV+S
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP---VKWMAPESIFDCVYTVQSDVWS 251
Query: 465 FGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLMVG 523
+G++ E+ + G +P G ++ + L K G + F + ++ +M
Sbjct: 252 YGILLWEIFSLGLNPY--PGILVNSKFYKLVKDGYQMAQPAFAPKNIYS-------IMQA 302
Query: 524 LSCVHPNHEKRPSVKEAARILKGEA 548
+ P H RP+ ++ L+ +A
Sbjct: 303 CWALEPTH--RPTFQQICSFLQEQA 325
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F +I+GEG+ +TV L + A+K EK + ++ + P+ T + L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
V+L + +L Y NG L K + S + IV SAL YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 149
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYV 451
+ IIHRD+K NILL+ + + ++ DF A GT Y++PE +
Sbjct: 150 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 452 YSGVPSEKTDVYSFGVVALEVAAGKSP--VDNDGCVIVDWV 490
+ +D+++ G + ++ AG P N+G + +
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKII 247
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 41/261 (15%)
Query: 311 VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSL 370
VAVK + + + +E M+ +H+N+V L G C G ++++ EY G L
Sbjct: 71 VAVKMLKSTAHAD-EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 129
Query: 371 DKILHNNSSSSI------VLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLD 424
L + + + L L+ VA +++L + IHRDV A N+LL
Sbjct: 130 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLT 186
Query: 425 AEFNAKLGDF----------------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVV 468
AK+GDF A +P + ++APE ++ V + ++DV+S+G++
Sbjct: 187 NGHVAKIGDFGLARDIMNDSNYIVKGNARLP---VKWMAPESIFDCVYTVQSDVWSYGIL 243
Query: 469 ALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLMVGLSCV 527
E+ + G +P G ++ + L K G + F + ++ +M +
Sbjct: 244 LWEIFSLGLNPY--PGILVNSKFYKLVKDGYQMAQPAFAPKNIYS-------IMQACWAL 294
Query: 528 HPNHEKRPSVKEAARILKGEA 548
P H RP+ ++ L+ +A
Sbjct: 295 EPTH--RPTFQQICSFLQEQA 313
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F +I+GEG+ +TV L + A+K EK + ++ + P+ T + L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
V+L + +L Y NG L K + S + IV SAL YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 149
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYV 451
+ IIHRD+K NILL+ + + ++ DF A GT Y++PE +
Sbjct: 150 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 206
Query: 452 YSGVPSEKTDVYSFGVVALEVAAGKSP 478
S+ +D+++ G + ++ AG P
Sbjct: 207 TEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 41/261 (15%)
Query: 311 VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSL 370
VAVK + + + +E M+ +H+N+V L G C G ++++ EY G L
Sbjct: 79 VAVKMLKSTAHAD-EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 371 DKILHNNSSSSI------VLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLD 424
L + + + L L+ VA +++L + IHRDV A N+LL
Sbjct: 138 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLT 194
Query: 425 AEFNAKLGDF----------------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVV 468
AK+GDF A +P + ++APE ++ V + ++DV+S+G++
Sbjct: 195 NGHVAKIGDFGLARDIMNDSNYIVKGNARLP---VKWMAPESIFDCVYTVQSDVWSYGIL 251
Query: 469 ALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLMVGLSCV 527
E+ + G +P G ++ + L K G + F + ++ +M +
Sbjct: 252 LWEIFSLGLNPY--PGILVNSKFYKLVKDGYQMAQPAFAPKNIYS-------IMQACWAL 302
Query: 528 HPNHEKRPSVKEAARILKGEA 548
P H RP+ ++ L+ +A
Sbjct: 303 EPTH--RPTFQQICSFLQEQA 321
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 120/286 (41%), Gaps = 49/286 (17%)
Query: 279 IKQATLGFNKNRIVGEGASATVYKGSLPSGGA----VAVKRFEKPNRV-ECARNPFTTEF 333
I ++L + N ++G G VY G+L AVK + + E ++ F TE
Sbjct: 44 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEG 101
Query: 334 ATMAGCLRHKNLVQLQGWCC--EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLN 391
M H N++ L G C EG+ LV V Y+ +G L + N + + V + +
Sbjct: 102 IIMKD-FSHPNVLSLLGICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNPTV---KDLIG 156
Query: 392 IVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------------EA 436
L VA + YL ++ +HRD+ A N +LD +F K+ DF
Sbjct: 157 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 213
Query: 437 TIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKK 496
T + ++A E + + + K+DV+SFGV+ E+ +P D
Sbjct: 214 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------------- 259
Query: 497 GKLLDAADFRLRG-KFNRKEM--ERMLMVGLSCVHPNHEKRPSVKE 539
D + L+G + + E + + V L C HP E RPS E
Sbjct: 260 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSE 305
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 120/286 (41%), Gaps = 49/286 (17%)
Query: 279 IKQATLGFNKNRIVGEGASATVYKGSLPSGGA----VAVKRFEKPNRV-ECARNPFTTEF 333
I ++L + N ++G G VY G+L AVK + + E ++ F TE
Sbjct: 22 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEG 79
Query: 334 ATMAGCLRHKNLVQLQGWCC--EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLN 391
M H N++ L G C EG+ LV V Y+ +G L + N + + V + +
Sbjct: 80 IIMKD-FSHPNVLSLLGICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNPTV---KDLIG 134
Query: 392 IVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------------EA 436
L VA + YL ++ +HRD+ A N +LD +F K+ DF
Sbjct: 135 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 191
Query: 437 TIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKK 496
T + ++A E + + + K+DV+SFGV+ E+ +P D
Sbjct: 192 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------------- 237
Query: 497 GKLLDAADFRLRG-KFNRKEM--ERMLMVGLSCVHPNHEKRPSVKE 539
D + L+G + + E + + V L C HP E RPS E
Sbjct: 238 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSE 283
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 120/286 (41%), Gaps = 49/286 (17%)
Query: 279 IKQATLGFNKNRIVGEGASATVYKGSLPSGGA----VAVKRFEKPNRV-ECARNPFTTEF 333
I ++L + N ++G G VY G+L AVK + + E ++ F TE
Sbjct: 43 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEG 100
Query: 334 ATMAGCLRHKNLVQLQGWCC--EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLN 391
M H N++ L G C EG+ LV V Y+ +G L + N + + V + +
Sbjct: 101 IIMKD-FSHPNVLSLLGICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNPTV---KDLIG 155
Query: 392 IVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------------EA 436
L VA + YL ++ +HRD+ A N +LD +F K+ DF
Sbjct: 156 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 212
Query: 437 TIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKK 496
T + ++A E + + + K+DV+SFGV+ E+ +P D
Sbjct: 213 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------------- 258
Query: 497 GKLLDAADFRLRG-KFNRKEM--ERMLMVGLSCVHPNHEKRPSVKE 539
D + L+G + + E + + V L C HP E RPS E
Sbjct: 259 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSE 304
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 120/286 (41%), Gaps = 49/286 (17%)
Query: 279 IKQATLGFNKNRIVGEGASATVYKGSLPSGGA----VAVKRFEKPNRV-ECARNPFTTEF 333
I ++L + N ++G G VY G+L AVK + + E ++ F TE
Sbjct: 17 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEG 74
Query: 334 ATMAGCLRHKNLVQLQGWCC--EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLN 391
M H N++ L G C EG+ LV V Y+ +G L + N + + V + +
Sbjct: 75 IIMKD-FSHPNVLSLLGICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNPTV---KDLIG 129
Query: 392 IVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------------EA 436
L VA + YL ++ +HRD+ A N +LD +F K+ DF
Sbjct: 130 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 186
Query: 437 TIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKK 496
T + ++A E + + + K+DV+SFGV+ E+ +P D
Sbjct: 187 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------------- 232
Query: 497 GKLLDAADFRLRG-KFNRKEM--ERMLMVGLSCVHPNHEKRPSVKE 539
D + L+G + + E + + V L C HP E RPS E
Sbjct: 233 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSE 278
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 120/286 (41%), Gaps = 49/286 (17%)
Query: 279 IKQATLGFNKNRIVGEGASATVYKGSLPSGGA----VAVKRFEKPNRV-ECARNPFTTEF 333
I ++L + N ++G G VY G+L AVK + + E ++ F TE
Sbjct: 24 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEG 81
Query: 334 ATMAGCLRHKNLVQLQGWCC--EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLN 391
M H N++ L G C EG+ LV V Y+ +G L + N + + V + +
Sbjct: 82 IIMKD-FSHPNVLSLLGICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNPTV---KDLIG 136
Query: 392 IVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------------EA 436
L VA + YL ++ +HRD+ A N +LD +F K+ DF
Sbjct: 137 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNK 193
Query: 437 TIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKK 496
T + ++A E + + + K+DV+SFGV+ E+ +P D
Sbjct: 194 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------------- 239
Query: 497 GKLLDAADFRLRG-KFNRKEM--ERMLMVGLSCVHPNHEKRPSVKE 539
D + L+G + + E + + V L C HP E RPS E
Sbjct: 240 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSE 285
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 120/286 (41%), Gaps = 49/286 (17%)
Query: 279 IKQATLGFNKNRIVGEGASATVYKGSLPSGGA----VAVKRFEKPNRV-ECARNPFTTEF 333
I ++L + N ++G G VY G+L AVK + + E ++ F TE
Sbjct: 20 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEG 77
Query: 334 ATMAGCLRHKNLVQLQGWCC--EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLN 391
M H N++ L G C EG+ LV V Y+ +G L + N + + V + +
Sbjct: 78 IIMKD-FSHPNVLSLLGICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNPTV---KDLIG 132
Query: 392 IVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------------EA 436
L VA + YL ++ +HRD+ A N +LD +F K+ DF
Sbjct: 133 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 189
Query: 437 TIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKK 496
T + ++A E + + + K+DV+SFGV+ E+ +P D
Sbjct: 190 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------------- 235
Query: 497 GKLLDAADFRLRG-KFNRKEM--ERMLMVGLSCVHPNHEKRPSVKE 539
D + L+G + + E + + V L C HP E RPS E
Sbjct: 236 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSE 281
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 120/286 (41%), Gaps = 49/286 (17%)
Query: 279 IKQATLGFNKNRIVGEGASATVYKGSLPSGGA----VAVKRFEKPNRV-ECARNPFTTEF 333
I ++L + N ++G G VY G+L AVK + + E ++ F TE
Sbjct: 23 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEG 80
Query: 334 ATMAGCLRHKNLVQLQGWCC--EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLN 391
M H N++ L G C EG+ LV V Y+ +G L + N + + V + +
Sbjct: 81 IIMKD-FSHPNVLSLLGICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNPTV---KDLIG 135
Query: 392 IVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------------EA 436
L VA + YL ++ +HRD+ A N +LD +F K+ DF
Sbjct: 136 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 192
Query: 437 TIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKK 496
T + ++A E + + + K+DV+SFGV+ E+ +P D
Sbjct: 193 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------------- 238
Query: 497 GKLLDAADFRLRG-KFNRKEM--ERMLMVGLSCVHPNHEKRPSVKE 539
D + L+G + + E + + V L C HP E RPS E
Sbjct: 239 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSE 284
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 120/286 (41%), Gaps = 49/286 (17%)
Query: 279 IKQATLGFNKNRIVGEGASATVYKGSLPSGGA----VAVKRFEKPNRV-ECARNPFTTEF 333
I ++L + N ++G G VY G+L AVK + + E ++ F TE
Sbjct: 25 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEG 82
Query: 334 ATMAGCLRHKNLVQLQGWCC--EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLN 391
M H N++ L G C EG+ LV V Y+ +G L + N + + V + +
Sbjct: 83 IIMKD-FSHPNVLSLLGICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNPTV---KDLIG 137
Query: 392 IVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------------EA 436
L VA + YL ++ +HRD+ A N +LD +F K+ DF
Sbjct: 138 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 194
Query: 437 TIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKK 496
T + ++A E + + + K+DV+SFGV+ E+ +P D
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------------- 240
Query: 497 GKLLDAADFRLRG-KFNRKEM--ERMLMVGLSCVHPNHEKRPSVKE 539
D + L+G + + E + + V L C HP E RPS E
Sbjct: 241 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSE 286
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F +I+GEG+ +TV L + A+K EK + ++ + P+ T + L H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 345 LVQLQGWCCEGNE-LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
V+L +C + +E L Y NG L K + S + IV SAL YL
Sbjct: 99 FVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYL 153
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEY 450
H + IIHRD+K NILL+ + + ++ DF A GT Y++PE
Sbjct: 154 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 210
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSP 478
+ + +D+++ G + ++ AG P
Sbjct: 211 LTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 112/265 (42%), Gaps = 45/265 (16%)
Query: 311 VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSL 370
VAVK + + + +E M+ +H+N+V L G C G ++++ EY G L
Sbjct: 79 VAVKMLKSTAHAD-EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 371 DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE----------RQIIHRDVKACN 420
L S VL + I AS LH + + IHRDV A N
Sbjct: 138 LNFLRRKSR---VLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARN 194
Query: 421 ILLDAEFNAKLGDF----------------EATIPAGTMGYLAPEYVYSGVPSEKTDVYS 464
+LL AK+GDF A +P + ++APE ++ V + ++DV+S
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP---VKWMAPESIFDCVYTVQSDVWS 251
Query: 465 FGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLMVG 523
+G++ E+ + G +P G ++ + L K G + F + ++ +M
Sbjct: 252 YGILLWEIFSLGLNPY--PGILVNSKFYKLVKDGYQMAQPAFAPKNIYS-------IMQA 302
Query: 524 LSCVHPNHEKRPSVKEAARILKGEA 548
+ P H RP+ ++ L+ +A
Sbjct: 303 CWALEPTH--RPTFQQICSFLQEQA 325
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F +I+GEG+ +TV L + A+K EK + ++ + P+ T + L H
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
V+L + +L Y NG L K + S + IV SAL YLH
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 125
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYV 451
+ IIHRD+K NILL+ + + ++ DF A GT Y++PE +
Sbjct: 126 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 182
Query: 452 YSGVPSEKTDVYSFGVVALEVAAGKSP 478
+ +D+++ G + ++ AG P
Sbjct: 183 TEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F +I+GEG+ +TV L + A+K EK + ++ + P+ T + L H
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
V+L + +L Y NG L K + S + IV SAL YLH
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 124
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYV 451
+ IIHRD+K NILL+ + + ++ DF A GT Y++PE +
Sbjct: 125 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 181
Query: 452 YSGVPSEKTDVYSFGVVALEVAAGKSP 478
+ +D+++ G + ++ AG P
Sbjct: 182 TEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 120/286 (41%), Gaps = 49/286 (17%)
Query: 279 IKQATLGFNKNRIVGEGASATVYKGSLPSGGA----VAVKRFEKPNRV-ECARNPFTTEF 333
I ++L + N ++G G VY G+L AVK + + E ++ F TE
Sbjct: 25 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEG 82
Query: 334 ATMAGCLRHKNLVQLQGWCC--EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLN 391
M H N++ L G C EG+ LV V Y+ +G L + N + + V + +
Sbjct: 83 IIMKD-FSHPNVLSLLGICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNPTV---KDLIG 137
Query: 392 IVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------------EA 436
L VA + YL ++ +HRD+ A N +LD +F K+ DF
Sbjct: 138 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 194
Query: 437 TIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKK 496
T + ++A E + + + K+DV+SFGV+ E+ +P D
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------------- 240
Query: 497 GKLLDAADFRLRG-KFNRKEM--ERMLMVGLSCVHPNHEKRPSVKE 539
D + L+G + + E + + V L C HP E RPS E
Sbjct: 241 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSE 286
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 120/286 (41%), Gaps = 49/286 (17%)
Query: 279 IKQATLGFNKNRIVGEGASATVYKGSLPSGGA----VAVKRFEKPNRV-ECARNPFTTEF 333
I ++L + N ++G G VY G+L AVK + + E ++ F TE
Sbjct: 24 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEG 81
Query: 334 ATMAGCLRHKNLVQLQGWCC--EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLN 391
M H N++ L G C EG+ LV V Y+ +G L + N + + V + +
Sbjct: 82 IIMKD-FSHPNVLSLLGICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNPTV---KDLIG 136
Query: 392 IVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------------EA 436
L VA + YL ++ +HRD+ A N +LD +F K+ DF
Sbjct: 137 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 193
Query: 437 TIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKK 496
T + ++A E + + + K+DV+SFGV+ E+ +P D
Sbjct: 194 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------------- 239
Query: 497 GKLLDAADFRLRG-KFNRKEM--ERMLMVGLSCVHPNHEKRPSVKE 539
D + L+G + + E + + V L C HP E RPS E
Sbjct: 240 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSE 285
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F +I+GEG+ +TV L + A+K EK + ++ + P+ T + L H
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
V+L + +L Y NG L K + S + IV SAL YLH
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 126
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYV 451
+ IIHRD+K NILL+ + + ++ DF A GT Y++PE +
Sbjct: 127 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 183
Query: 452 YSGVPSEKTDVYSFGVVALEVAAGKSP 478
+ +D+++ G + ++ AG P
Sbjct: 184 TEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 109/233 (46%), Gaps = 18/233 (7%)
Query: 252 KKRHDGRSKEDHVCTVQRVPMRLALTD---IKQATLGFNKNRIVGEGASATVYKGSLPSG 308
KK +DG ++ V + P + D I + +L K +G G V+ +
Sbjct: 149 KKGNDGLCQKLSVPCMSSKPQKPWEKDAWEIPRESLKLEKK--LGAGQFGEVWMATYNKH 206
Query: 309 GAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNG 368
VAVK KP + F E A + L+H LV+L + ++ E++ G
Sbjct: 207 TKVAVKTM-KPGSMSV--EAFLAE-ANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKG 261
Query: 369 SLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFN 428
SL L ++ S L K ++ +A ++++ + R IHRD++A NIL+ A
Sbjct: 262 SLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLV 316
Query: 429 AKLGDFE-ATIPAG-TMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKSP 478
K+ DF A + A + + APE + G + K+DV+SFG++ +E+ G+ P
Sbjct: 317 CKIADFGLARVGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 369
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F +I+GEG+ +TV L + A+K EK + ++ + P+ T + L H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
V+L + +L Y NG L K + S + IV SAL YLH
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 131
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYV 451
+ IIHRD+K NILL+ + + ++ DF A GT Y++PE +
Sbjct: 132 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 188
Query: 452 YSGVPSEKTDVYSFGVVALEVAAGKSP 478
+ +D+++ G + ++ AG P
Sbjct: 189 TEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F +I+GEG+ +TV L + A+K EK + ++ + P+ T + L H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
V+L + +L Y NG L K + S + IV SAL YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 147
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYV 451
+ IIHRD+K NILL+ + + ++ DF A GT Y++PE +
Sbjct: 148 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 452 YSGVPSEKTDVYSFGVVALEVAAGKSP 478
+ +D+++ G + ++ AG P
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F +I+GEG+ +TV L + A+K EK + ++ + P+ T + L H
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
V+L + +L Y NG L K + S + IV SAL YLH
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 127
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYV 451
+ IIHRD+K NILL+ + + ++ DF A GT Y++PE +
Sbjct: 128 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 184
Query: 452 YSGVPSEKTDVYSFGVVALEVAAGKSP 478
+ +D+++ G + ++ AG P
Sbjct: 185 TEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F +I+GEG+ +TV L + A+K EK + ++ + P+ T + L H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
V+L + +L Y NG L K + S + IV SAL YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 147
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYV 451
+ IIHRD+K NILL+ + + ++ DF A GT Y++PE +
Sbjct: 148 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 452 YSGVPSEKTDVYSFGVVALEVAAGKSP 478
+ +D+++ G + ++ AG P
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F +I+GEG+ +TV L + A+K EK + ++ + P+ T + L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
V+L + +L Y NG L K + S + IV SAL YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 149
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYV 451
+ IIHRD+K NILL+ + + ++ DF A GT Y++PE +
Sbjct: 150 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 452 YSGVPSEKTDVYSFGVVALEVAAGKSP 478
+ +D+++ G + ++ AG P
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F +I+GEG+ +TV L + A+K EK + ++ + P+ T + L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
V+L + +L Y NG L K + S + IV SAL YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 149
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYV 451
+ IIHRD+K NILL+ + + ++ DF A GT Y++PE +
Sbjct: 150 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 452 YSGVPSEKTDVYSFGVVALEVAAGKSP 478
+ +D+++ G + ++ AG P
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F +I+GEG+ +TV L + A+K EK + ++ + P+ T + L H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
V+L + +L Y NG L K + S + IV SAL YLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 146
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYV 451
+ IIHRD+K NILL+ + + ++ DF A GT Y++PE +
Sbjct: 147 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 203
Query: 452 YSGVPSEKTDVYSFGVVALEVAAGKSP 478
+ +D+++ G + ++ AG P
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 25/207 (12%)
Query: 292 VGEGASATVYKGSLPSGGAVAV-KRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+G G+ K S G + V K + + E + +E + L+H N+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE-LKHPNIVRYYD 72
Query: 351 WCCE--GNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
+ L +V EY G L ++ + L E VL V + L+ +EC
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE----FVLRVMTQLTLALKECH 128
Query: 409 RQ------IIHRDVKACNILLDAEFNAKLGDFE-----------ATIPAGTMGYLAPEYV 451
R+ ++HRD+K N+ LD + N KLGDF A GT Y++PE +
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQM 188
Query: 452 YSGVPSEKTDVYSFGVVALEVAAGKSP 478
+EK+D++S G + E+ A P
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPP 215
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 16/208 (7%)
Query: 280 KQATLGFNKNRIVGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAG 338
K + F R +G G+ V+ S +G A+K +K V + T + M
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 339 CLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVAS 398
+ H ++++ G + ++ ++ +Y+ G L +L + ++ + L
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCL---- 117
Query: 399 ALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF--EATIP------AGTMGYLAPEY 450
AL YLH + II+RD+K NILLD + K+ DF +P GT Y+APE
Sbjct: 118 ALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEV 174
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSP 478
V + ++ D +SFG++ E+ AG +P
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F +I+GEG+ +TV L + A+K EK + ++ + P+ T + L H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
V+L + +L Y NG L K + S + IV SAL YLH
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 152
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYV 451
+ IIHRD+K NILL+ + + ++ DF A GT Y++PE +
Sbjct: 153 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 209
Query: 452 YSGVPSEKTDVYSFGVVALEVAAGKSP 478
+ +D+++ G + ++ AG P
Sbjct: 210 TEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F +I+GEG+ +TV L + A+K EK + ++ + P+ T + L H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
V+L + +L Y NG L K + S + IV SAL YLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 150
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYV 451
+ IIHRD+K NILL+ + + ++ DF A GT Y++PE +
Sbjct: 151 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 207
Query: 452 YSGVPSEKTDVYSFGVVALEVAAGKSP 478
+ +D+++ G + ++ AG P
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F +I+GEG+ +TV L + A+K EK + ++ + P+ T + L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
V+L + +L Y NG L K + S + IV SAL YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 149
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYV 451
+ IIHRD+K NILL+ + + ++ DF A GT Y++PE +
Sbjct: 150 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 452 YSGVPSEKTDVYSFGVVALEVAAGKSP 478
+ +D+++ G + ++ AG P
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 117/280 (41%), Gaps = 42/280 (15%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F +VG G VYKG + +G A+K + E E + H+N
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE---EEIKQEINMLKKYSHHRN 82
Query: 345 LVQLQGWCCEGN------ELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVAS 398
+ G + N +L LV E+ GS+ ++ N +++ W I +
Sbjct: 83 IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEW--IAYICREILR 140
Query: 399 ALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIP-----------AGTMGYLA 447
LS+LH+ ++IHRD+K N+LL KL DF + GT ++A
Sbjct: 141 GLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMA 197
Query: 448 PEYVYSGVPSE-----KTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKKGKLLDA 502
PE + + K+D++S G+ A+E+A G P+ + + +R +
Sbjct: 198 PEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD--------MHPMRALFLIPRN 249
Query: 503 ADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAAR 542
RL+ K K+ + + SC+ NH +RP+ ++ +
Sbjct: 250 PAPRLKSKKWSKKFQSFIE---SCLVKNHSQRPATEQLMK 286
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F +I+GEG+ +TV L + A+K EK + ++ + P+ T + L H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
V+L + +L Y NG L K + S + IV SAL YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 147
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYV 451
+ IIHRD+K NILL+ + + ++ DF A GT Y++PE +
Sbjct: 148 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELL 204
Query: 452 YSGVPSEKTDVYSFGVVALEVAAGKSP 478
+ +D+++ G + ++ AG P
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 22/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V+ G + VAVK KP + F E A + L+H LV+L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSV--QAFLEE-ANLMKTLQHDKLVRLYAV 75
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
+ + ++ E++ GSL L ++ ++L K ++ +A ++Y+ +
Sbjct: 76 VTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIER---KNY 130
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
IHRD++A N+L+ K+ DF E T G + + APE + G + K
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 190
Query: 460 TDVYSFGVVALEVAA-GKSP 478
++V+SFG++ E+ GK P
Sbjct: 191 SNVWSFGILLYEIVTYGKIP 210
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 101/227 (44%), Gaps = 28/227 (12%)
Query: 292 VGEGASATVYKGSL-PSGGAVAVKRF-----EKPNRVECARNPFTTEFATMAGCLRHKNL 345
+G+G V+KG L VA+K E + F E M+ L H N+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSN-LNHPNI 85
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
V+L G N +V E++P G L H + + W +L ++L +A + Y+
Sbjct: 86 VKLYGLM--HNPPRMVMEFVPCGDL---YHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 406 ECERQIIHRDVKACNILL-----DAEFNAKLGDFEATIPA--------GTMGYLAPEYVY 452
+ I+HRD+++ NI L +A AK+ DF + + G ++APE +
Sbjct: 141 Q-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETIG 199
Query: 453 SGVPS--EKTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKKG 497
+ S EK D YSF ++ + G+ P D + ++ +R++G
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG 246
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 87/208 (41%), Gaps = 20/208 (9%)
Query: 286 FNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNP--FTTEFATMAGCLRHK 343
F+ R++G G+ A V L + R K V + TE H
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
LV L + L V EY+ G L + H L E ++ AL+YL
Sbjct: 114 FLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRK--LPEEHARFYSAEISLALNYL 169
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF----EATIPA-------GTMGYLAPEYVY 452
HE R II+RD+K N+LLD+E + KL D+ E P GT Y+APE +
Sbjct: 170 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILR 226
Query: 453 SGVPSEKTDVYSFGVVALEVAAGKSPVD 480
D ++ GV+ E+ AG+SP D
Sbjct: 227 GEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 25/207 (12%)
Query: 292 VGEGASATVYKGSLPSGGAVAV-KRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+G G+ K S G + V K + + E + +E + L+H N+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE-LKHPNIVRYYD 72
Query: 351 WCCE--GNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
+ L +V EY G L ++ + L E VL V + L+ +EC
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE----FVLRVMTQLTLALKECH 128
Query: 409 RQ------IIHRDVKACNILLDAEFNAKLGDFE-----------ATIPAGTMGYLAPEYV 451
R+ ++HRD+K N+ LD + N KLGDF A GT Y++PE +
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQM 188
Query: 452 YSGVPSEKTDVYSFGVVALEVAAGKSP 478
+EK+D++S G + E+ A P
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPP 215
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 90/202 (44%), Gaps = 23/202 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V G VAVK ++ + E + F E TM L H LV+ G
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE---DEFFQEAQTMMK-LSHPKLVKFYGV 71
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
C + + +V EY+ NG L L ++ L + L + V +++L Q
Sbjct: 72 CSKEYPIYIVTEYISNGCLLNYLRSHGKG---LEPSQLLEMCYDVCEGMAFLES---HQF 125
Query: 412 IHRDVKACNILLDAEFNAKLGDFEAT---------IPAGT---MGYLAPEYVYSGVPSEK 459
IHRD+ A N L+D + K+ DF T GT + + APE + S K
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSK 185
Query: 460 TDVYSFGVVALEV-AAGKSPVD 480
+DV++FG++ EV + GK P D
Sbjct: 186 SDVWAFGILMWEVFSLGKMPYD 207
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 85/204 (41%), Gaps = 20/204 (9%)
Query: 286 FNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
F K +G+G+ VYKG V + E E ++ C +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYI 79
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
+ G + +L ++ EYL GS +L ++ I+ + L YLH
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIA-----TILREILKGLDYLHS 134
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAPEYVYSG 454
E + IHRD+KA N+LL + + KL DF + GT ++APE +
Sbjct: 135 ERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS 191
Query: 455 VPSEKTDVYSFGVVALEVAAGKSP 478
K D++S G+ A+E+A G+ P
Sbjct: 192 AYDFKADIWSLGITAIELAKGEPP 215
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F +I+GEG+ +TV L + A+K EK + ++ + P+ T + L H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
V+L + +L Y NG L K + S + IV SAL YLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 150
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYV 451
+ IIHRD+K NILL+ + + ++ DF A GT Y++PE +
Sbjct: 151 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 207
Query: 452 YSGVPSEKTDVYSFGVVALEVAAGKSP 478
+ +D+++ G + ++ AG P
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 101/227 (44%), Gaps = 28/227 (12%)
Query: 292 VGEGASATVYKGSL-PSGGAVAVKRF-----EKPNRVECARNPFTTEFATMAGCLRHKNL 345
+G+G V+KG L VA+K E + F E M+ L H N+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSN-LNHPNI 85
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
V+L G N +V E++P G L H + + W +L ++L +A + Y+
Sbjct: 86 VKLYGLM--HNPPRMVMEFVPCGDL---YHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 406 ECERQIIHRDVKACNILL-----DAEFNAKLGDFEATIPA--------GTMGYLAPEYVY 452
+ I+HRD+++ NI L +A AK+ DF + + G ++APE +
Sbjct: 141 Q-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIG 199
Query: 453 SGVPS--EKTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKKG 497
+ S EK D YSF ++ + G+ P D + ++ +R++G
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG 246
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F +I+GEG+ +TV L + A+K EK + ++ + P+ T + L H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
V+L + +L Y NG L K + S + IV SAL YLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 146
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYV 451
+ IIHRD+K NILL+ + + ++ DF A GT Y++PE +
Sbjct: 147 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 203
Query: 452 YSGVPSEKTDVYSFGVVALEVAAGKSP 478
+ +D+++ G + ++ AG P
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 110/266 (41%), Gaps = 51/266 (19%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEG--NELVLVYEY 364
+G VAVK+ + + E F E + L+H N+V+ +G C L L+ EY
Sbjct: 69 TGEVVAVKKLQ--HSTEEHLRDFEREIEILKS-LQHDNIVKYKGVCYSAGRRNLKLIMEY 125
Query: 365 LPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLD 424
LP GSL L + + K L + + YL ++ IHRD+ NIL++
Sbjct: 126 LPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 179
Query: 425 AEFNAKLGDFEAT--IPA------------GTMGYLAPEYVYSGVPSEKTDVYSFGVVAL 470
E K+GDF T +P + + APE + S +DV+SFGVV
Sbjct: 180 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 239
Query: 471 E----VAAGKSPV---------DNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKE-- 515
E + KSP D G +IV + L K G+ R +
Sbjct: 240 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN-----------GRLPRPDGC 288
Query: 516 MERMLMVGLSCVHPNHEKRPSVKEAA 541
+ + M+ C + N +RPS ++ A
Sbjct: 289 PDEIYMIMTECWNNNVNQRPSFRDLA 314
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 87/208 (41%), Gaps = 20/208 (9%)
Query: 286 FNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNP--FTTEFATMAGCLRHK 343
F+ R++G G+ A V L + + K V + TE H
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
LV L + L V EY+ G L + H L E ++ AL+YL
Sbjct: 71 FLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRK--LPEEHARFYSAEISLALNYL 126
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF----EATIPA-------GTMGYLAPEYVY 452
HE R II+RD+K N+LLD+E + KL D+ E P GT Y+APE +
Sbjct: 127 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILR 183
Query: 453 SGVPSEKTDVYSFGVVALEVAAGKSPVD 480
D ++ GV+ E+ AG+SP D
Sbjct: 184 GEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 103/229 (44%), Gaps = 30/229 (13%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G VY G + K + +E F E A M ++H NLVQL G
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKE-IKHPNLVQLLGV 96
Query: 352 CCEGNELVLVYEYLPNGSLDKIL---HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
C +V EY+P G+L L + +++VL L + ++SA+ YL +
Sbjct: 97 CTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVL-----LYMATQISSAMEYLE---K 148
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVP 456
+ IHRD+ A N L+ K+ DF T AG + + APE +
Sbjct: 149 KNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTF 208
Query: 457 SEKTDVYSFGVVALEVAA-GKSPVDNDGCVIVDWVWNLRKKGKLLDAAD 504
S K+DV++FGV+ E+A G SP + + V++L +KG ++ +
Sbjct: 209 SIKSDVWAFGVLLWEIATYGMSPYPG---IDLSQVYDLLEKGYRMEQPE 254
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 110/266 (41%), Gaps = 51/266 (19%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEG--NELVLVYEY 364
+G VAVK+ + + E F E + L+H N+V+ +G C L L+ EY
Sbjct: 43 TGEVVAVKKLQ--HSTEEHLRDFEREIEILKS-LQHDNIVKYKGVCYSAGRRNLKLIMEY 99
Query: 365 LPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLD 424
LP GSL L + + K L + + YL ++ IHRD+ NIL++
Sbjct: 100 LPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 153
Query: 425 AEFNAKLGDFEAT--IPAGT------------MGYLAPEYVYSGVPSEKTDVYSFGVVAL 470
E K+GDF T +P + + APE + S +DV+SFGVV
Sbjct: 154 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 213
Query: 471 E----VAAGKSPV---------DNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKE-- 515
E + KSP D G +IV + L K G+ R +
Sbjct: 214 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN-----------GRLPRPDGC 262
Query: 516 MERMLMVGLSCVHPNHEKRPSVKEAA 541
+ + M+ C + N +RPS ++ A
Sbjct: 263 PDEIYMIMTECWNNNVNQRPSFRDLA 288
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 25/207 (12%)
Query: 292 VGEGASATVYKGSLPSGGAVAV-KRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+G G+ K S G + V K + + E + +E + L+H N+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE-LKHPNIVRYYD 72
Query: 351 WCCE--GNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
+ L +V EY G L ++ + L E VL V + L+ +EC
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE----FVLRVMTQLTLALKECH 128
Query: 409 RQ------IIHRDVKACNILLDAEFNAKLGDFE-----------ATIPAGTMGYLAPEYV 451
R+ ++HRD+K N+ LD + N KLGDF A GT Y++PE +
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQM 188
Query: 452 YSGVPSEKTDVYSFGVVALEVAAGKSP 478
+EK+D++S G + E+ A P
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPP 215
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 18/197 (9%)
Query: 292 VGEGA-SATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+GEG+ + S G +K R E A +A ++H N+VQ +
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLAN-MKHPNIVQYRE 90
Query: 351 WCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQ 410
E L +V +Y G L K + N+ ++ ++ L+ + + AL ++H+ R+
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRI--NAQKGVLFQEDQILDWFVQICLALKHVHD---RK 145
Query: 411 IIHRDVKACNILLDAEFNAKLGDF------EATIP-----AGTMGYLAPEYVYSGVPSEK 459
I+HRD+K+ NI L + +LGDF +T+ GT YL+PE + + K
Sbjct: 146 ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNK 205
Query: 460 TDVYSFGVVALEVAAGK 476
+D+++ G V E+ K
Sbjct: 206 SDIWALGCVLYELCTLK 222
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 109/243 (44%), Gaps = 28/243 (11%)
Query: 252 KKRHDGRSKEDHVCTVQRVPMRLALTD---IKQATLGFNKNRIVGEGASATVYKGSLPSG 308
KK +DG ++ V + P + D I + +L K +G G V+ +
Sbjct: 155 KKGNDGLCQKLSVPCMSSKPQKPWEKDAWEIPRESLKLEKK--LGAGQFGEVWMATYNKH 212
Query: 309 GAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNG 368
VAVK KP + F E A + L+H LV+L + ++ E++ G
Sbjct: 213 TKVAVKTM-KPGSMSV--EAFLAE-ANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKG 267
Query: 369 SLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFN 428
SL L ++ S L K ++ +A ++++ + R IHRD++A NIL+ A
Sbjct: 268 SLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLV 322
Query: 429 AKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEKTDVYSFGVVALEVAA-G 475
K+ DF E T G + + APE + G + K+DV+SFG++ +E+ G
Sbjct: 323 CKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYG 382
Query: 476 KSP 478
+ P
Sbjct: 383 RIP 385
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 25/215 (11%)
Query: 286 FNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
F + +G G ATVYKG + G + K + E + E + M L+H+N+
Sbjct: 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKE-LKHENI 65
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIV----LGVASALS 401
V+L N+L LV+E++ N L K + + + + E LN+V + L+
Sbjct: 66 VRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLE--LNLVKYFQWQLLQGLA 122
Query: 402 YLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT----IPAG-------TMGYLAPEY 450
+ HE +I+HRD+K N+L++ KLGDF IP T+ Y AP+
Sbjct: 123 FCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDV 179
Query: 451 VY-SGVPSEKTDVYSFGVVALEVAAGKS--PVDND 482
+ S S D++S G + E+ GK P ND
Sbjct: 180 LMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND 214
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 110/266 (41%), Gaps = 51/266 (19%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEG--NELVLVYEY 364
+G VAVK+ + + E F E + L+H N+V+ +G C L L+ EY
Sbjct: 41 TGEVVAVKKLQ--HSTEEHLRDFEREIEILKS-LQHDNIVKYKGVCYSAGRRNLKLIMEY 97
Query: 365 LPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLD 424
LP GSL L + + K L + + YL ++ IHRD+ NIL++
Sbjct: 98 LPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 151
Query: 425 AEFNAKLGDFEAT--IPAGT------------MGYLAPEYVYSGVPSEKTDVYSFGVVAL 470
E K+GDF T +P + + APE + S +DV+SFGVV
Sbjct: 152 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 211
Query: 471 E----VAAGKSPV---------DNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKE-- 515
E + KSP D G +IV + L K G+ R +
Sbjct: 212 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN-----------GRLPRPDGC 260
Query: 516 MERMLMVGLSCVHPNHEKRPSVKEAA 541
+ + M+ C + N +RPS ++ A
Sbjct: 261 PDEIYMIMTECWNNNVNQRPSFRDLA 286
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 110/266 (41%), Gaps = 51/266 (19%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEG--NELVLVYEY 364
+G VAVK+ + + E F E + L+H N+V+ +G C L L+ EY
Sbjct: 44 TGEVVAVKKLQ--HSTEEHLRDFEREIEILKS-LQHDNIVKYKGVCYSAGRRNLKLIMEY 100
Query: 365 LPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLD 424
LP GSL L + + K L + + YL ++ IHRD+ NIL++
Sbjct: 101 LPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 154
Query: 425 AEFNAKLGDFEAT--IPAGT------------MGYLAPEYVYSGVPSEKTDVYSFGVVAL 470
E K+GDF T +P + + APE + S +DV+SFGVV
Sbjct: 155 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 214
Query: 471 E----VAAGKSPV---------DNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKE-- 515
E + KSP D G +IV + L K G+ R +
Sbjct: 215 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN-----------GRLPRPDGC 263
Query: 516 MERMLMVGLSCVHPNHEKRPSVKEAA 541
+ + M+ C + N +RPS ++ A
Sbjct: 264 PDEIYMIMTECWNNNVNQRPSFRDLA 289
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 120/286 (41%), Gaps = 49/286 (17%)
Query: 279 IKQATLGFNKNRIVGEGASATVYKGSLPSGGA----VAVKRFEKPNRV-ECARNPFTTEF 333
I ++L + N ++G G VY G+L AVK + + E ++ F TE
Sbjct: 25 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEG 82
Query: 334 ATMAGCLRHKNLVQLQGWCC--EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLN 391
M H N++ L G C EG+ LV V Y+ +G L + N + + V + +
Sbjct: 83 IIMKD-FSHPNVLSLLGICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNPTV---KDLIG 137
Query: 392 IVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------------EA 436
L VA + +L ++ +HRD+ A N +LD +F K+ DF
Sbjct: 138 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 194
Query: 437 TIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKK 496
T + ++A E + + + K+DV+SFGV+ E+ +P D
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------------- 240
Query: 497 GKLLDAADFRLRG-KFNRKEM--ERMLMVGLSCVHPNHEKRPSVKE 539
D + L+G + + E + + V L C HP E RPS E
Sbjct: 241 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSE 286
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 42/255 (16%)
Query: 311 VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSL 370
VAVK K + E + +E M +HKN++ L G C + L ++ EY G+L
Sbjct: 104 VAVKML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 162
Query: 371 DKILHNNSSSSIVLSW------EKRL------NIVLGVASALSYLHEECERQIIHRDVKA 418
+ L + S+ E++L + VA + YL ++ IHRD+ A
Sbjct: 163 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 219
Query: 419 CNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSF 465
N+L+ + K+ DF + T + ++APE ++ + + ++DV+SF
Sbjct: 220 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 279
Query: 466 GVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLMVGL 524
GV+ E+ G SP V V+ ++ L K+G +D + M+
Sbjct: 280 GVLLWEIFTLGGSPYPG---VPVEELFKLLKEGHRMDKPS---------NCTNELYMMMR 327
Query: 525 SCVHPNHEKRPSVKE 539
C H +RP+ K+
Sbjct: 328 DCWHAVPSQRPTFKQ 342
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 110/266 (41%), Gaps = 51/266 (19%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEG--NELVLVYEY 364
+G VAVK+ + + E F E + L+H N+V+ +G C L L+ EY
Sbjct: 42 TGEVVAVKKLQ--HSTEEHLRDFEREIEILKS-LQHDNIVKYKGVCYSAGRRNLKLIMEY 98
Query: 365 LPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLD 424
LP GSL L + + K L + + YL ++ IHRD+ NIL++
Sbjct: 99 LPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 152
Query: 425 AEFNAKLGDFEAT--IPAGT------------MGYLAPEYVYSGVPSEKTDVYSFGVVAL 470
E K+GDF T +P + + APE + S +DV+SFGVV
Sbjct: 153 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 212
Query: 471 E----VAAGKSPV---------DNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKE-- 515
E + KSP D G +IV + L K G+ R +
Sbjct: 213 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN-----------GRLPRPDGC 261
Query: 516 MERMLMVGLSCVHPNHEKRPSVKEAA 541
+ + M+ C + N +RPS ++ A
Sbjct: 262 PDEIYMIMTECWNNNVNQRPSFRDLA 287
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 115/291 (39%), Gaps = 50/291 (17%)
Query: 286 FNKNRIVGEGASATVYKG------SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGC 339
N + +G GA V + + VAVK K +E +
Sbjct: 29 LNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKML-KEGATHSEHRALMSELKILIHI 87
Query: 340 LRHKNLVQLQGWCCE-GNELVLVYEYLPNGSLDKILHNNSSSSI--------VLSWEKRL 390
H N+V L G C + G L+++ E+ G+L L + + + L+ E +
Sbjct: 88 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLI 147
Query: 391 NIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------------- 434
VA + +L R+ IHRD+ A NILL + K+ DF
Sbjct: 148 XYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKG 204
Query: 435 EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSPVDNDGCVIVDWVWNL 493
+A +P + ++APE ++ V + ++DV+SFGV+ E+ + G SP G I +
Sbjct: 205 DARLP---LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVKIDEEFXRR 259
Query: 494 RKKGKLLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARIL 544
K+G + A D+ M L C H +RP+ E L
Sbjct: 260 LKEGTRMRAPDY---------TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 110/266 (41%), Gaps = 51/266 (19%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEG--NELVLVYEY 364
+G VAVK+ + + E F E + L+H N+V+ +G C L L+ EY
Sbjct: 38 TGEVVAVKKLQ--HSTEEHLRDFEREIEILKS-LQHDNIVKYKGVCYSAGRRNLKLIMEY 94
Query: 365 LPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLD 424
LP GSL L + + K L + + YL ++ IHRD+ NIL++
Sbjct: 95 LPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 148
Query: 425 AEFNAKLGDFEAT--IPAGT------------MGYLAPEYVYSGVPSEKTDVYSFGVVAL 470
E K+GDF T +P + + APE + S +DV+SFGVV
Sbjct: 149 NENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 208
Query: 471 E----VAAGKSPV---------DNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKE-- 515
E + KSP D G +IV + L K G+ R +
Sbjct: 209 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN-----------GRLPRPDGC 257
Query: 516 MERMLMVGLSCVHPNHEKRPSVKEAA 541
+ + M+ C + N +RPS ++ A
Sbjct: 258 PDEIYMIMTECWNNNVNQRPSFRDLA 283
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 110/266 (41%), Gaps = 51/266 (19%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEG--NELVLVYEY 364
+G VAVK+ + + E F E + L+H N+V+ +G C L L+ EY
Sbjct: 36 TGEVVAVKKLQ--HSTEEHLRDFEREIEILKS-LQHDNIVKYKGVCYSAGRRNLKLIMEY 92
Query: 365 LPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLD 424
LP GSL L + + K L + + YL ++ IHRD+ NIL++
Sbjct: 93 LPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 146
Query: 425 AEFNAKLGDFEAT--IPAGT------------MGYLAPEYVYSGVPSEKTDVYSFGVVAL 470
E K+GDF T +P + + APE + S +DV+SFGVV
Sbjct: 147 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 206
Query: 471 E----VAAGKSPV---------DNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKE-- 515
E + KSP D G +IV + L K G+ R +
Sbjct: 207 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN-----------GRLPRPDGC 255
Query: 516 MERMLMVGLSCVHPNHEKRPSVKEAA 541
+ + M+ C + N +RPS ++ A
Sbjct: 256 PDEIYMIMTECWNNNVNQRPSFRDLA 281
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 120/286 (41%), Gaps = 49/286 (17%)
Query: 279 IKQATLGFNKNRIVGEGASATVYKGSLPSGGA----VAVKRFEKPNRV-ECARNPFTTEF 333
I ++L + N ++G G VY G+L AVK + + E ++ F TE
Sbjct: 23 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEG 80
Query: 334 ATMAGCLRHKNLVQLQGWCC--EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLN 391
M H N++ L G C EG+ LV V Y+ +G L + N + + V + +
Sbjct: 81 IIMKD-FSHPNVLSLLGICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNPTV---KDLIG 135
Query: 392 IVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------------EA 436
L VA + +L ++ +HRD+ A N +LD +F K+ DF
Sbjct: 136 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 192
Query: 437 TIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKK 496
T + ++A E + + + K+DV+SFGV+ E+ +P D
Sbjct: 193 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------------- 238
Query: 497 GKLLDAADFRLRG-KFNRKEM--ERMLMVGLSCVHPNHEKRPSVKE 539
D + L+G + + E + + V L C HP E RPS E
Sbjct: 239 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSE 284
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 110/266 (41%), Gaps = 51/266 (19%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEG--NELVLVYEY 364
+G VAVK+ + + E F E + L+H N+V+ +G C L L+ EY
Sbjct: 38 TGEVVAVKKLQ--HSTEEHLRDFEREIEILKS-LQHDNIVKYKGVCYSAGRRNLKLIMEY 94
Query: 365 LPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLD 424
LP GSL L + + K L + + YL ++ IHRD+ NIL++
Sbjct: 95 LPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 148
Query: 425 AEFNAKLGDFEAT--IPAGT------------MGYLAPEYVYSGVPSEKTDVYSFGVVAL 470
E K+GDF T +P + + APE + S +DV+SFGVV
Sbjct: 149 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 208
Query: 471 E----VAAGKSPV---------DNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKE-- 515
E + KSP D G +IV + L K G+ R +
Sbjct: 209 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN-----------GRLPRPDGC 257
Query: 516 MERMLMVGLSCVHPNHEKRPSVKEAA 541
+ + M+ C + N +RPS ++ A
Sbjct: 258 PDEIYMIMTECWNNNVNQRPSFRDLA 283
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 110/266 (41%), Gaps = 51/266 (19%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEG--NELVLVYEY 364
+G VAVK+ + + E F E + L+H N+V+ +G C L L+ EY
Sbjct: 45 TGEVVAVKKLQ--HSTEEHLRDFEREIEILKS-LQHDNIVKYKGVCYSAGRRNLKLIMEY 101
Query: 365 LPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLD 424
LP GSL L + + K L + + YL ++ IHRD+ NIL++
Sbjct: 102 LPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 155
Query: 425 AEFNAKLGDFEAT--IPAGT------------MGYLAPEYVYSGVPSEKTDVYSFGVVAL 470
E K+GDF T +P + + APE + S +DV+SFGVV
Sbjct: 156 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 215
Query: 471 E----VAAGKSPV---------DNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKE-- 515
E + KSP D G +IV + L K G+ R +
Sbjct: 216 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN-----------GRLPRPDGC 264
Query: 516 MERMLMVGLSCVHPNHEKRPSVKEAA 541
+ + M+ C + N +RPS ++ A
Sbjct: 265 PDEIYMIMTECWNNNVNQRPSFRDLA 290
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 85/201 (42%), Gaps = 33/201 (16%)
Query: 311 VAVKRFEKPNRVECARNP-FTTEF---ATMAGCLRHKNLVQL----QGWCCEGNELVLVY 362
VAVK R + AR+P F F A A L H +V + + G +V
Sbjct: 40 VAVKVL----RADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVM 95
Query: 363 EYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNIL 422
EY+ +L I+H ++ ++ + ++ AL++ H+ IIHRDVK NIL
Sbjct: 96 EYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIL 148
Query: 423 LDAEFNAKLGDF--------------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVV 468
+ A K+ DF + GT YL+PE ++DVYS G V
Sbjct: 149 ISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 469 ALEVAAGKSPVDNDGCVIVDW 489
EV G+ P D V V +
Sbjct: 209 LYEVLTGEPPFTGDSPVSVAY 229
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 87/208 (41%), Gaps = 20/208 (9%)
Query: 286 FNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNP--FTTEFATMAGCLRHK 343
F+ R++G G+ A V L + + K V + TE H
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
LV L + L V EY+ G L + H L E ++ AL+YL
Sbjct: 67 FLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRK--LPEEHARFYSAEISLALNYL 122
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF----EATIPA-------GTMGYLAPEYVY 452
HE R II+RD+K N+LLD+E + KL D+ E P GT Y+APE +
Sbjct: 123 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILR 179
Query: 453 SGVPSEKTDVYSFGVVALEVAAGKSPVD 480
D ++ GV+ E+ AG+SP D
Sbjct: 180 GEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 278 DIKQATLGFNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMA 337
+I + +L K +G G V+ + VAVK KP + F E A +
Sbjct: 11 EIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSV--EAFLAE-ANVM 64
Query: 338 GCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVA 397
L+H LV+L + ++ E++ GSL L ++ S L K ++ +A
Sbjct: 65 KTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIA 121
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGY 445
++++ + R IHRD++A NIL+ A K+ DF E T G + +
Sbjct: 122 EGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW 178
Query: 446 LAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKSP 478
APE + G + K+DV+SFG++ +E+ G+ P
Sbjct: 179 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 212
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 42/255 (16%)
Query: 311 VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSL 370
VAVK K + E + +E M +HKN++ L G C + L ++ EY G+L
Sbjct: 52 VAVKML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 110
Query: 371 DKILHNNSSSSIVLSW------EKRL------NIVLGVASALSYLHEECERQIIHRDVKA 418
+ L + S+ E++L + VA + YL ++ IHRD+ A
Sbjct: 111 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 167
Query: 419 CNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSF 465
N+L+ + K+ DF + T + ++APE ++ + + ++DV+SF
Sbjct: 168 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 227
Query: 466 GVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLMVGL 524
GV+ E+ G SP V V+ ++ L K+G +D + M+
Sbjct: 228 GVLLWEIFTLGGSPYPG---VPVEELFKLLKEGHRMDKPS---------NCTNELYMMMR 275
Query: 525 SCVHPNHEKRPSVKE 539
C H +RP+ K+
Sbjct: 276 DCWHAVPSQRPTFKQ 290
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 110/266 (41%), Gaps = 51/266 (19%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEG--NELVLVYEY 364
+G VAVK+ + + E F E + L+H N+V+ +G C L L+ EY
Sbjct: 37 TGEVVAVKKLQ--HSTEEHLRDFEREIEILKS-LQHDNIVKYKGVCYSAGRRNLKLIMEY 93
Query: 365 LPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLD 424
LP GSL L + + K L + + YL ++ IHRD+ NIL++
Sbjct: 94 LPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 147
Query: 425 AEFNAKLGDFEAT--IPAGT------------MGYLAPEYVYSGVPSEKTDVYSFGVVAL 470
E K+GDF T +P + + APE + S +DV+SFGVV
Sbjct: 148 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 207
Query: 471 E----VAAGKSPV---------DNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKE-- 515
E + KSP D G +IV + L K G+ R +
Sbjct: 208 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN-----------GRLPRPDGC 256
Query: 516 MERMLMVGLSCVHPNHEKRPSVKEAA 541
+ + M+ C + N +RPS ++ A
Sbjct: 257 PDEIYMIMTECWNNNVNQRPSFRDLA 282
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 42/255 (16%)
Query: 311 VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSL 370
VAVK K + E + +E M +HKN++ L G C + L ++ EY G+L
Sbjct: 63 VAVKML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 371 DKILHNNSSSSIVLSW------EKRL------NIVLGVASALSYLHEECERQIIHRDVKA 418
+ L + S+ E++L + VA + YL ++ IHRD+ A
Sbjct: 122 REYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 419 CNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSF 465
N+L+ + K+ DF + T + ++APE ++ + + ++DV+SF
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 466 GVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLMVGL 524
GV+ E+ G SP V V+ ++ L K+G +D + M+
Sbjct: 239 GVLLWEIFTLGGSPYPG---VPVEELFKLLKEGHRMDKPS---------NCTNELYMMMR 286
Query: 525 SCVHPNHEKRPSVKE 539
C H +RP+ K+
Sbjct: 287 DCWHAVPSQRPTFKQ 301
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 121/283 (42%), Gaps = 43/283 (15%)
Query: 279 IKQATLGFNKNRIVGEGASATVYKGSLPSGGA----VAVKRFEKPNRV-ECARNPFTTEF 333
I ++L + N ++G G VY G+L AVK + + E ++ F TE
Sbjct: 84 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEG 141
Query: 334 ATMAGCLRHKNLVQLQGWCC--EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLN 391
M H N++ L G C EG+ LV V Y+ +G L + N + + V + +
Sbjct: 142 IIMKD-FSHPNVLSLLGICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNPTV---KDLIG 196
Query: 392 IVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------------EA 436
L VA + +L ++ +HRD+ A N +LD +F K+ DF
Sbjct: 197 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 253
Query: 437 TIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKK 496
T + ++A E + + + K+DV+SFGV+ E+ +P D V+ L +
Sbjct: 254 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--Q 311
Query: 497 GKLLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKE 539
G+ L ++ + + V L C HP E RPS E
Sbjct: 312 GRRLLQPEYC---------PDPLYEVMLKCWHPKAEMRPSFSE 345
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 101/227 (44%), Gaps = 28/227 (12%)
Query: 292 VGEGASATVYKGSL-PSGGAVAVKRF-----EKPNRVECARNPFTTEFATMAGCLRHKNL 345
+G+G V+KG L VA+K E + F E M+ L H N+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSN-LNHPNI 85
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
V+L G N +V E++P G L H + + W +L ++L +A + Y+
Sbjct: 86 VKLYGLM--HNPPRMVMEFVPCGDL---YHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 406 ECERQIIHRDVKACNILL-----DAEFNAKLGDFEATIPA--------GTMGYLAPEYVY 452
+ I+HRD+++ NI L +A AK+ DF + + G ++APE +
Sbjct: 141 Q-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIG 199
Query: 453 SGVPS--EKTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKKG 497
+ S EK D YSF ++ + G+ P D + ++ +R++G
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG 246
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 111/266 (41%), Gaps = 51/266 (19%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEG--NELVLVYEY 364
+G VAVK+ + + E F E + L+H N+V+ +G C L L+ EY
Sbjct: 41 TGEVVAVKKLQ--HSTEEHLRDFEREIEILKS-LQHDNIVKYKGVCYSAGRRNLKLIMEY 97
Query: 365 LPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLD 424
LP GSL L ++ + K L + + YL ++ IHRD+ NIL++
Sbjct: 98 LPYGSLRDYLQAHAER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 151
Query: 425 AEFNAKLGDFEAT--IPAGT------------MGYLAPEYVYSGVPSEKTDVYSFGVVAL 470
E K+GDF T +P + + APE + S +DV+SFGVV
Sbjct: 152 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 211
Query: 471 E----VAAGKSPV---------DNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKE-- 515
E + KSP D G +IV + L K G+ R +
Sbjct: 212 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN-----------GRLPRPDGC 260
Query: 516 MERMLMVGLSCVHPNHEKRPSVKEAA 541
+ + M+ C + N +RPS ++ A
Sbjct: 261 PDEIYMIMTECWNNNVNQRPSFRDLA 286
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 120/286 (41%), Gaps = 49/286 (17%)
Query: 279 IKQATLGFNKNRIVGEGASATVYKGSLPSGGA----VAVKRFEKPNRV-ECARNPFTTEF 333
I ++L + N ++G G VY G+L AVK + + E ++ F TE
Sbjct: 30 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEG 87
Query: 334 ATMAGCLRHKNLVQLQGWCC--EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLN 391
M H N++ L G C EG+ LV V Y+ +G L + N + + V + +
Sbjct: 88 IIMKD-FSHPNVLSLLGICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNPTV---KDLIG 142
Query: 392 IVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------------EA 436
L VA + +L ++ +HRD+ A N +LD +F K+ DF
Sbjct: 143 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 199
Query: 437 TIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKK 496
T + ++A E + + + K+DV+SFGV+ E+ +P D
Sbjct: 200 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------------- 245
Query: 497 GKLLDAADFRLRG-KFNRKEM--ERMLMVGLSCVHPNHEKRPSVKE 539
D + L+G + + E + + V L C HP E RPS E
Sbjct: 246 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSE 291
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 42/255 (16%)
Query: 311 VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSL 370
VAVK K + E + +E M +HKN++ L G C + L ++ EY G+L
Sbjct: 63 VAVKML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 371 DKILHNNSSSSIVLSW------EKRL------NIVLGVASALSYLHEECERQIIHRDVKA 418
+ L + S+ E++L + VA + YL ++ IHRD+ A
Sbjct: 122 REYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 419 CNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSF 465
N+L+ + K+ DF + T + ++APE ++ + + ++DV+SF
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 466 GVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLMVGL 524
GV+ E+ G SP V V+ ++ L K+G +D + M+
Sbjct: 239 GVLLWEIFTLGGSPYPG---VPVEELFKLLKEGHRMDKPS---------NCTNELYMMMR 286
Query: 525 SCVHPNHEKRPSVKE 539
C H +RP+ K+
Sbjct: 287 DCWHAVPSQRPTFKQ 301
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 42/255 (16%)
Query: 311 VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSL 370
VAVK K + E + +E M +HKN++ L G C + L ++ EY G+L
Sbjct: 63 VAVKML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 371 DKILHNNSSSSIVLSW------EKRL------NIVLGVASALSYLHEECERQIIHRDVKA 418
+ L + S+ E++L + VA + YL ++ IHRD+ A
Sbjct: 122 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 419 CNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSF 465
N+L+ + K+ DF + T + ++APE ++ + + ++DV+SF
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 466 GVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLMVGL 524
GV+ E+ G SP V V+ ++ L K+G +D + M+
Sbjct: 239 GVLLWEIFTLGGSPYPG---VPVEELFKLLKEGHRMDKPS---------NCTNELYMMMR 286
Query: 525 SCVHPNHEKRPSVKE 539
C H +RP+ K+
Sbjct: 287 DCWHAVPSQRPTFKQ 301
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 110/266 (41%), Gaps = 51/266 (19%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEG--NELVLVYEY 364
+G VAVK+ + + E F E + L+H N+V+ +G C L L+ EY
Sbjct: 38 TGEVVAVKKLQ--HSTEEHLRDFEREIEILKS-LQHDNIVKYKGVCYSAGRRNLKLIMEY 94
Query: 365 LPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLD 424
LP GSL L + + K L + + YL ++ IHRD+ NIL++
Sbjct: 95 LPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 148
Query: 425 AEFNAKLGDFEAT--IPAGT------------MGYLAPEYVYSGVPSEKTDVYSFGVVAL 470
E K+GDF T +P + + APE + S +DV+SFGVV
Sbjct: 149 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 208
Query: 471 E----VAAGKSPV---------DNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKE-- 515
E + KSP D G +IV + L K G+ R +
Sbjct: 209 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN-----------GRLPRPDGC 257
Query: 516 MERMLMVGLSCVHPNHEKRPSVKEAA 541
+ + M+ C + N +RPS ++ A
Sbjct: 258 PDEIYMIMTECWNNNVNQRPSFRDLA 283
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 42/255 (16%)
Query: 311 VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSL 370
VAVK K + E + +E M +HKN++ L G C + L ++ EY G+L
Sbjct: 55 VAVKML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 113
Query: 371 DKILHNNSSSSIVLSW------EKRL------NIVLGVASALSYLHEECERQIIHRDVKA 418
+ L + S+ E++L + VA + YL ++ IHRD+ A
Sbjct: 114 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 170
Query: 419 CNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSF 465
N+L+ + K+ DF + T + ++APE ++ + + ++DV+SF
Sbjct: 171 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 230
Query: 466 GVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLMVGL 524
GV+ E+ G SP V V+ ++ L K+G +D + M+
Sbjct: 231 GVLLWEIFTLGGSPYPG---VPVEELFKLLKEGHRMDKPS---------NCTNELYMMMR 278
Query: 525 SCVHPNHEKRPSVKE 539
C H +RP+ K+
Sbjct: 279 DCWHAVPSQRPTFKQ 293
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 120/286 (41%), Gaps = 49/286 (17%)
Query: 279 IKQATLGFNKNRIVGEGASATVYKGSLPSGGA----VAVKRFEKPNRV-ECARNPFTTEF 333
I ++L + N ++G G VY G+L AVK + + E ++ F TE
Sbjct: 26 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEG 83
Query: 334 ATMAGCLRHKNLVQLQGWCC--EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLN 391
M H N++ L G C EG+ LV V Y+ +G L + N + + V + +
Sbjct: 84 IIMKD-FSHPNVLSLLGICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNPTV---KDLIG 138
Query: 392 IVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------------EA 436
L VA + +L ++ +HRD+ A N +LD +F K+ DF
Sbjct: 139 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 195
Query: 437 TIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKK 496
T + ++A E + + + K+DV+SFGV+ E+ +P D
Sbjct: 196 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------------- 241
Query: 497 GKLLDAADFRLRG-KFNRKEM--ERMLMVGLSCVHPNHEKRPSVKE 539
D + L+G + + E + + V L C HP E RPS E
Sbjct: 242 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSE 287
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 120/286 (41%), Gaps = 49/286 (17%)
Query: 279 IKQATLGFNKNRIVGEGASATVYKGSLPSGGA----VAVKRFEKPNRV-ECARNPFTTEF 333
I ++L + N ++G G VY G+L AVK + + E ++ F TE
Sbjct: 25 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEG 82
Query: 334 ATMAGCLRHKNLVQLQGWCC--EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLN 391
M H N++ L G C EG+ LV V Y+ +G L + N + + V + +
Sbjct: 83 IIMKD-FSHPNVLSLLGICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNPTV---KDLIG 137
Query: 392 IVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------------EA 436
L VA + +L ++ +HRD+ A N +LD +F K+ DF
Sbjct: 138 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 194
Query: 437 TIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKK 496
T + ++A E + + + K+DV+SFGV+ E+ +P D
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------------- 240
Query: 497 GKLLDAADFRLRG-KFNRKEM--ERMLMVGLSCVHPNHEKRPSVKE 539
D + L+G + + E + + V L C HP E RPS E
Sbjct: 241 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSE 286
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 110/266 (41%), Gaps = 51/266 (19%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEG--NELVLVYEY 364
+G VAVK+ + + E F E + L+H N+V+ +G C L L+ EY
Sbjct: 56 TGEVVAVKKLQ--HSTEEHLRDFEREIEILKS-LQHDNIVKYKGVCYSAGRRNLKLIMEY 112
Query: 365 LPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLD 424
LP GSL L + + K L + + YL ++ IHRD+ NIL++
Sbjct: 113 LPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 166
Query: 425 AEFNAKLGDFEAT--IPAGT------------MGYLAPEYVYSGVPSEKTDVYSFGVVAL 470
E K+GDF T +P + + APE + S +DV+SFGVV
Sbjct: 167 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 226
Query: 471 E----VAAGKSPV---------DNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKE-- 515
E + KSP D G +IV + L K G+ R +
Sbjct: 227 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN-----------GRLPRPDGC 275
Query: 516 MERMLMVGLSCVHPNHEKRPSVKEAA 541
+ + M+ C + N +RPS ++ A
Sbjct: 276 PDEIYMIMTECWNNNVNQRPSFRDLA 301
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 87/208 (41%), Gaps = 20/208 (9%)
Query: 286 FNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNP--FTTEFATMAGCLRHK 343
F+ R++G G+ A V L + + K V + TE H
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
LV L + L V EY+ G L + H L E ++ AL+YL
Sbjct: 82 FLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRK--LPEEHARFYSAEISLALNYL 137
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF----EATIPA-------GTMGYLAPEYVY 452
HE R II+RD+K N+LLD+E + KL D+ E P GT Y+APE +
Sbjct: 138 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILR 194
Query: 453 SGVPSEKTDVYSFGVVALEVAAGKSPVD 480
D ++ GV+ E+ AG+SP D
Sbjct: 195 GEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 120/286 (41%), Gaps = 49/286 (17%)
Query: 279 IKQATLGFNKNRIVGEGASATVYKGSLPSGGA----VAVKRFEKPNRV-ECARNPFTTEF 333
I ++L + N ++G G VY G+L AVK + + E ++ F TE
Sbjct: 26 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEG 83
Query: 334 ATMAGCLRHKNLVQLQGWCC--EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLN 391
M H N++ L G C EG+ LV V Y+ +G L + N + + V + +
Sbjct: 84 IIMKD-FSHPNVLSLLGICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNPTV---KDLIG 138
Query: 392 IVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------------EA 436
L VA + +L ++ +HRD+ A N +LD +F K+ DF
Sbjct: 139 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNK 195
Query: 437 TIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKK 496
T + ++A E + + + K+DV+SFGV+ E+ +P D
Sbjct: 196 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------------- 241
Query: 497 GKLLDAADFRLRG-KFNRKEM--ERMLMVGLSCVHPNHEKRPSVKE 539
D + L+G + + E + + V L C HP E RPS E
Sbjct: 242 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSE 287
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 42/255 (16%)
Query: 311 VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSL 370
VAVK K + E + +E M +HKN++ L G C + L ++ EY G+L
Sbjct: 56 VAVKML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 114
Query: 371 DKILHNNSSSSIVLSW------EKRL------NIVLGVASALSYLHEECERQIIHRDVKA 418
+ L + S+ E++L + VA + YL ++ IHRD+ A
Sbjct: 115 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 171
Query: 419 CNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSF 465
N+L+ + K+ DF + T + ++APE ++ + + ++DV+SF
Sbjct: 172 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 231
Query: 466 GVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLMVGL 524
GV+ E+ G SP V V+ ++ L K+G +D + M+
Sbjct: 232 GVLLWEIFTLGGSPYPG---VPVEELFKLLKEGHRMDKPS---------NCTNELYMMMR 279
Query: 525 SCVHPNHEKRPSVKE 539
C H +RP+ K+
Sbjct: 280 DCWHAVPSQRPTFKQ 294
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 27/203 (13%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G VY+G + K + +E F E A M ++H NLVQL G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKE-IKHPNLVQLLGV 79
Query: 352 CCEGNELVLVYEYLPNGSLDKIL---HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
C ++ E++ G+L L + +++VL L + ++SA+ YL +
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---K 131
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVP 456
+ IHRD+ A N L+ K+ DF T PAG + + APE +
Sbjct: 132 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKF 191
Query: 457 SEKTDVYSFGVVALEVAA-GKSP 478
S K+DV++FGV+ E+A G SP
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSP 214
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 110/266 (41%), Gaps = 51/266 (19%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEG--NELVLVYEY 364
+G VAVK+ + + E F E + L+H N+V+ +G C L L+ EY
Sbjct: 56 TGEVVAVKKLQ--HSTEEHLRDFEREIEILKS-LQHDNIVKYKGVCYSAGRRNLKLIMEY 112
Query: 365 LPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLD 424
LP GSL L + + K L + + YL ++ IHRD+ NIL++
Sbjct: 113 LPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 166
Query: 425 AEFNAKLGDFEAT--IPAGT------------MGYLAPEYVYSGVPSEKTDVYSFGVVAL 470
E K+GDF T +P + + APE + S +DV+SFGVV
Sbjct: 167 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 226
Query: 471 E----VAAGKSPV---------DNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKE-- 515
E + KSP D G +IV + L K G+ R +
Sbjct: 227 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN-----------GRLPRPDGC 275
Query: 516 MERMLMVGLSCVHPNHEKRPSVKEAA 541
+ + M+ C + N +RPS ++ A
Sbjct: 276 PDEIYMIMTECWNNNVNQRPSFRDLA 301
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+G V+ G+ VA+K KP + + F E M LRH+ LVQL
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTM--SPEAFLQEAQVMKK-LRHEKLVQLYAV 71
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
E + +V EY+ GSL L + + L + +++ +AS ++Y+
Sbjct: 72 VSE-EPIXIVTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQIASGMAYVER---MNY 125
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
+HRD++A NIL+ K+ DF E T G + + APE G + K
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 185
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 186 SDVWSFGILLTELTTKGRVP 205
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 85/201 (42%), Gaps = 33/201 (16%)
Query: 311 VAVKRFEKPNRVECARNP-FTTEF---ATMAGCLRHKNLVQL----QGWCCEGNELVLVY 362
VAVK R + AR+P F F A A L H +V + + G +V
Sbjct: 40 VAVKVL----RADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVM 95
Query: 363 EYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNIL 422
EY+ +L I+H ++ ++ + ++ AL++ H+ IIHRDVK NI+
Sbjct: 96 EYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIM 148
Query: 423 LDAEFNAKLGDF--------------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVV 468
+ A K+ DF + GT YL+PE ++DVYS G V
Sbjct: 149 ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 469 ALEVAAGKSPVDNDGCVIVDW 489
EV G+ P D V V +
Sbjct: 209 LYEVLTGEPPFTGDSPVSVAY 229
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 27/203 (13%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G VY+G + K + +E F E A M ++H NLVQL G
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKE-IKHPNLVQLLGV 78
Query: 352 CCEGNELVLVYEYLPNGSLDKIL---HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
C ++ E++ G+L L + +++VL L + ++SA+ YL +
Sbjct: 79 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---K 130
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVP 456
+ IHRD+ A N L+ K+ DF T PAG + + APE +
Sbjct: 131 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKF 190
Query: 457 SEKTDVYSFGVVALEVAA-GKSP 478
S K+DV++FGV+ E+A G SP
Sbjct: 191 SIKSDVWAFGVLLWEIATYGMSP 213
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 85/201 (42%), Gaps = 33/201 (16%)
Query: 311 VAVKRFEKPNRVECARNP-FTTEF---ATMAGCLRHKNLVQL----QGWCCEGNELVLVY 362
VAVK R + AR+P F F A A L H +V + + G +V
Sbjct: 40 VAVKVL----RADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVM 95
Query: 363 EYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNIL 422
EY+ +L I+H ++ ++ + ++ AL++ H+ IIHRDVK NI+
Sbjct: 96 EYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIM 148
Query: 423 LDAEFNAKLGDF--------------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVV 468
+ A K+ DF + GT YL+PE ++DVYS G V
Sbjct: 149 ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 469 ALEVAAGKSPVDNDGCVIVDW 489
EV G+ P D V V +
Sbjct: 209 LYEVLTGEPPFTGDSPVSVAY 229
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 85/201 (42%), Gaps = 33/201 (16%)
Query: 311 VAVKRFEKPNRVECARNP-FTTEF---ATMAGCLRHKNLVQL----QGWCCEGNELVLVY 362
VAVK R + AR+P F F A A L H +V + + G +V
Sbjct: 40 VAVKVL----RADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVM 95
Query: 363 EYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNIL 422
EY+ +L I+H ++ ++ + ++ AL++ H+ IIHRDVK NI+
Sbjct: 96 EYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIM 148
Query: 423 LDAEFNAKLGDF--------------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVV 468
+ A K+ DF + GT YL+PE ++DVYS G V
Sbjct: 149 ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 469 ALEVAAGKSPVDNDGCVIVDW 489
EV G+ P D V V +
Sbjct: 209 LYEVLTGEPPFTGDSPVSVAY 229
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 111/266 (41%), Gaps = 51/266 (19%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEG--NELVLVYEY 364
+G VAVK+ + + E F E + L+H N+V+ +G C L L+ E+
Sbjct: 41 TGEVVAVKKLQ--HSTEEHLRDFEREIEILKS-LQHDNIVKYKGVCYSAGRRNLKLIMEF 97
Query: 365 LPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLD 424
LP GSL + L + + K L + + YL ++ IHRD+ NIL++
Sbjct: 98 LPYGSLREYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 151
Query: 425 AEFNAKLGDFEAT--IPAGT------------MGYLAPEYVYSGVPSEKTDVYSFGVVAL 470
E K+GDF T +P + + APE + S +DV+SFGVV
Sbjct: 152 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 211
Query: 471 E----VAAGKSPV---------DNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKE-- 515
E + KSP D G +IV + L K G+ R +
Sbjct: 212 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN-----------GRLPRPDGC 260
Query: 516 MERMLMVGLSCVHPNHEKRPSVKEAA 541
+ + M+ C + N +RPS ++ A
Sbjct: 261 PDEIYMIMTECWNNNVNQRPSFRDLA 286
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 113/267 (42%), Gaps = 47/267 (17%)
Query: 311 VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSL 370
VAVK + + + +E M+ +H+N+V L G C G ++++ EY G L
Sbjct: 79 VAVKMLKSTAHAD-EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 371 DKILHNNSSSSIVLSWEKR------------LNIVLGVASALSYLHEECERQIIHRDVKA 418
L + S+ L+ VA +++L + IHRDV A
Sbjct: 138 LNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAA 194
Query: 419 CNILLDAEFNAKLGDF----------------EATIPAGTMGYLAPEYVYSGVPSEKTDV 462
N+LL AK+GDF A +P + ++APE ++ V + ++DV
Sbjct: 195 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP---VKWMAPESIFDCVYTVQSDV 251
Query: 463 YSFGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLM 521
+S+G++ E+ + G +P G ++ + L K G + F + ++ +M
Sbjct: 252 WSYGILLWEIFSLGLNPY--PGILVNSKFYKLVKDGYQMAQPAFAPKNIYS-------IM 302
Query: 522 VGLSCVHPNHEKRPSVKEAARILKGEA 548
+ P H RP+ ++ L+ +A
Sbjct: 303 QACWALEPTH--RPTFQQICSFLQEQA 327
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 85/201 (42%), Gaps = 33/201 (16%)
Query: 311 VAVKRFEKPNRVECARNP-FTTEF---ATMAGCLRHKNLVQL----QGWCCEGNELVLVY 362
VAVK R + AR+P F F A A L H +V + + G +V
Sbjct: 57 VAVKVL----RADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVM 112
Query: 363 EYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNIL 422
EY+ +L I+H ++ ++ + ++ AL++ H+ IIHRDVK NI+
Sbjct: 113 EYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIM 165
Query: 423 LDAEFNAKLGDF--------------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVV 468
+ A K+ DF + GT YL+PE ++DVYS G V
Sbjct: 166 ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 225
Query: 469 ALEVAAGKSPVDNDGCVIVDW 489
EV G+ P D V V +
Sbjct: 226 LYEVLTGEPPFTGDSPVSVAY 246
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 108/255 (42%), Gaps = 42/255 (16%)
Query: 311 VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSL 370
VAVK K + E + +E M +HKN++ L G C + L ++ EY G+L
Sbjct: 63 VAVKML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 371 DKILHNNSSSSI------------VLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKA 418
+ L + LS + ++ VA + YL ++ IHRD+ A
Sbjct: 122 REYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 419 CNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSF 465
N+L+ + K+ DF + T + ++APE ++ + + ++DV+SF
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 466 GVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLMVGL 524
GV+ E+ G SP V V+ ++ L K+G +D + M+
Sbjct: 239 GVLLWEIFTLGGSPYPG---VPVEELFKLLKEGHRMDKPS---------NCTNELYMMMR 286
Query: 525 SCVHPNHEKRPSVKE 539
C H +RP+ K+
Sbjct: 287 DCWHAVPSQRPTFKQ 301
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 109/266 (40%), Gaps = 51/266 (19%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEG--NELVLVYEY 364
+G VAVK+ + + E F E + L+H N+V+ +G C L L+ EY
Sbjct: 39 TGEVVAVKKLQ--HSTEEHLRDFEREIEILKS-LQHDNIVKYKGVCYSAGRRNLKLIMEY 95
Query: 365 LPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLD 424
LP GSL L + + K L + + YL ++ IHR++ NIL++
Sbjct: 96 LPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRNLATRNILVE 149
Query: 425 AEFNAKLGDFEAT--IPAGTMGY------------LAPEYVYSGVPSEKTDVYSFGVVAL 470
E K+GDF T +P Y APE + S +DV+SFGVV
Sbjct: 150 NENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 209
Query: 471 E----VAAGKSPV---------DNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKE-- 515
E + KSP D G +IV + L K G+ R +
Sbjct: 210 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN-----------GRLPRPDGC 258
Query: 516 MERMLMVGLSCVHPNHEKRPSVKEAA 541
+ + M+ C + N +RPS ++ A
Sbjct: 259 PDEIYMIMTECWNNNVNQRPSFRDLA 284
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 108/255 (42%), Gaps = 42/255 (16%)
Query: 311 VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSL 370
VAVK K + E + +E M +HKN++ L G C + L ++ EY G+L
Sbjct: 48 VAVKML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 106
Query: 371 DKILHNNSSSSI------------VLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKA 418
+ L + LS + ++ VA + YL ++ IHRD+ A
Sbjct: 107 REYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 163
Query: 419 CNILLDAEFNAKLGDF-------------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSF 465
N+L+ + K+ DF + T + ++APE ++ + + ++DV+SF
Sbjct: 164 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 223
Query: 466 GVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLMVGL 524
GV+ E+ G SP V V+ ++ L K+G +D + M+
Sbjct: 224 GVLLWEIFTLGGSPYPG---VPVEELFKLLKEGHRMDKPS---------NCTNELYMMMR 271
Query: 525 SCVHPNHEKRPSVKE 539
C H +RP+ K+
Sbjct: 272 DCWHAVPSQRPTFKQ 286
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+G V+ G+ VA+K KP + + F E M LRH+ LVQL
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTM--SPEAFLQEAQVMKK-LRHEKLVQLYAV 247
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
E + +V EY+ GSL L + + L + +++ +AS ++Y+
Sbjct: 248 VSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQIASGMAYVER---MNY 301
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
+HRD++A NIL+ K+ DF E T G + + APE G + K
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 362 SDVWSFGILLTELTTKGRVP 381
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 292 VGEGASATVYKGS-LPSGGAVAVKR-FEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQ 349
+G G +TVY VA+K F P E F E + L H+N+V +
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHN-SSQLSHQNIVSMI 77
Query: 350 GWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECER 409
E + LV EY+ +L + + ++ LS + +N + + + H+
Sbjct: 78 DVDEEDDCYYLVMEYIEGPTLSEYIESHGP----LSVDTAINFTNQILDGIKHAHD---M 130
Query: 410 QIIHRDVKACNILLDAEFNAKLGDF-------EATIPA-----GTMGYLAPEYVYSGVPS 457
+I+HRD+K NIL+D+ K+ DF E ++ GT+ Y +PE
Sbjct: 131 RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATD 190
Query: 458 EKTDVYSFGVVALEVAAGKSPVDNDGCV 485
E TD+YS G+V E+ G+ P + + V
Sbjct: 191 ECTDIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 30/210 (14%)
Query: 290 RIVGEGASATVYKGS---LPSGGA---VAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
R +G+G+ VY+G+ + G A VAVK + + R F E + M G H
Sbjct: 20 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNEASVMKGFTCH- 77
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHN------NSSSSIVLSWEKRLNIVLGVA 397
++V+L G +G ++V E + +G L L + N+ + ++ + + +A
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT--------IPAGTMG----- 444
++YL+ ++ +HRD+ A N ++ +F K+GDF T G G
Sbjct: 138 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 194
Query: 445 YLAPEYVYSGVPSEKTDVYSFGVVALEVAA 474
++APE + GV + +D++SFGVV E+ +
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+G V+ G+ VA+K KP + + F E M LRH+ LVQL
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTM--SPEAFLQEAQVMKK-LRHEKLVQLYAV 74
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
E + +V EY+ GSL L + + L + +++ +AS ++Y+
Sbjct: 75 VSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQIASGMAYVER---MNY 128
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
+HRD++A NIL+ K+ DF E T G + + APE G + K
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 188
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 189 SDVWSFGILLTELTTKGRVP 208
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+G V+ G+ VA+K KP + + F E M LRH+ LVQL
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTM--SPEAFLQEAQVMKK-LRHEKLVQLYAV 247
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
E + +V EY+ GSL L + + L + +++ +AS ++Y+
Sbjct: 248 VSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQIASGMAYVER---MNY 301
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
+HRD++A NIL+ K+ DF E T G + + APE G + K
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 362 SDVWSFGILLTELTTKGRVP 381
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 30/210 (14%)
Query: 290 RIVGEGASATVYKGS---LPSGGA---VAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
R +G+G+ VY+G+ + G A VAVK + + R F E + M G H
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNEASVMKGFTCH- 80
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHN------NSSSSIVLSWEKRLNIVLGVA 397
++V+L G +G ++V E + +G L L + N+ + ++ + + +A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGTMGY------------ 445
++YL+ ++ +HRD+ A N ++ +F K+GDF T Y
Sbjct: 141 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR 197
Query: 446 -LAPEYVYSGVPSEKTDVYSFGVVALEVAA 474
+APE + GV + +D++SFGVV E+ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 30/210 (14%)
Query: 290 RIVGEGASATVYKGS---LPSGGA---VAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
R +G+G+ VY+G+ + G A VAVK + + R F E + M G H
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNEASVMKGFTCH- 80
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHN------NSSSSIVLSWEKRLNIVLGVA 397
++V+L G +G ++V E + +G L L + N+ + ++ + + +A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT--------IPAGTMG----- 444
++YL+ ++ +HRD+ A N ++ +F K+GDF T G G
Sbjct: 141 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 445 YLAPEYVYSGVPSEKTDVYSFGVVALEVAA 474
++APE + GV + +D++SFGVV E+ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 30/210 (14%)
Query: 290 RIVGEGASATVYKGS---LPSGGA---VAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
R +G+G+ VY+G+ + G A VAVK + + R F E + M G H
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNEASVMKGFTCH- 80
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHN------NSSSSIVLSWEKRLNIVLGVA 397
++V+L G +G ++V E + +G L L + N+ + ++ + + +A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT--------IPAGTMG----- 444
++YL+ ++ +HRD+ A N ++ +F K+GDF T G G
Sbjct: 141 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 445 YLAPEYVYSGVPSEKTDVYSFGVVALEVAA 474
++APE + GV + +D++SFGVV E+ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+G V+ G+ VA+K KP + + F E M LRH+ LVQL
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTM--SPEAFLQEAQVMKK-LRHEKLVQLYAV 81
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
E + +V EY+ GSL L + L + +++ +AS ++Y+
Sbjct: 82 VSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVER---MNY 135
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
+HRD++A NIL+ K+ DF E T G + + APE G + K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 115/291 (39%), Gaps = 50/291 (17%)
Query: 286 FNKNRIVGEGASATVYKG------SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGC 339
N + +G GA V + + VAVK K +E +
Sbjct: 29 LNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKML-KEGATHSEHRALMSELKILIHI 87
Query: 340 LRHKNLVQLQGWCCE-GNELVLVYEYLPNGSLDKILHNNSSSSI--------VLSWEKRL 390
H N+V L G C + G L+++ E+ G+L L + + + L+ E +
Sbjct: 88 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLI 147
Query: 391 NIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------------- 434
VA + +L R+ IHRD+ A NILL + K+ DF
Sbjct: 148 CYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 204
Query: 435 EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSPVDNDGCVIVDWVWNL 493
+A +P + ++APE ++ V + ++DV+SFGV+ E+ + G SP G I +
Sbjct: 205 DARLP---LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVKIDEEFCRR 259
Query: 494 RKKGKLLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARIL 544
K+G + A D+ M L C H +RP+ E L
Sbjct: 260 LKEGTRMRAPDY---------TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 83/204 (40%), Gaps = 20/204 (9%)
Query: 286 FNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
F K +G+G+ V+KG V + E E ++ C +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYV 67
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
+ G + +L ++ EYL GS +L ++ I+ + L YLH
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDYLHS 122
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAPEYVYSG 454
E + IHRD+KA N+LL KL DF + GT ++APE +
Sbjct: 123 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS 179
Query: 455 VPSEKTDVYSFGVVALEVAAGKSP 478
K D++S G+ A+E+A G+ P
Sbjct: 180 AYDSKADIWSLGITAIELARGEPP 203
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 30/210 (14%)
Query: 290 RIVGEGASATVYKGS---LPSGGA---VAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
R +G+G+ VY+G+ + G A VAVK + + R F E + M G H
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNEASVMKGFTCH- 79
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHN------NSSSSIVLSWEKRLNIVLGVA 397
++V+L G +G ++V E + +G L L + N+ + ++ + + +A
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT--------IPAGTMG----- 444
++YL+ ++ +HRD+ A N ++ +F K+GDF T G G
Sbjct: 140 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 445 YLAPEYVYSGVPSEKTDVYSFGVVALEVAA 474
++APE + GV + +D++SFGVV E+ +
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 30/210 (14%)
Query: 290 RIVGEGASATVYKGS---LPSGGA---VAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
R +G+G+ VY+G+ + G A VAVK + + R F E + M G H
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNEASVMKGFTCH- 80
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHN------NSSSSIVLSWEKRLNIVLGVA 397
++V+L G +G ++V E + +G L L + N+ + ++ + + +A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT--------IPAGTMG----- 444
++YL+ ++ +HRD+ A N ++ +F K+GDF T G G
Sbjct: 141 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 445 YLAPEYVYSGVPSEKTDVYSFGVVALEVAA 474
++APE + GV + +D++SFGVV E+ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 23/202 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V G VA+K ++ + E + F E M L H+ LVQL G
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMN-LSHEKLVQLYGV 71
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
C + + ++ EY+ NG L L ++ L + V A+ YL +Q
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYLREMRHR---FQTQQLLEMCKDVCEAMEYLE---SKQF 125
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
+HRD+ A N L++ + K+ DF E T G+ + + PE + S K
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 185
Query: 460 TDVYSFGVVALEV-AAGKSPVD 480
+D+++FGV+ E+ + GK P +
Sbjct: 186 SDIWAFGVLMWEIYSLGKMPYE 207
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 44/222 (19%)
Query: 290 RIVGEGASATVYKGSLPS------GGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
R +GEGA V++ P VAVK ++ + + F E A MA +
Sbjct: 53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQAD-FQREAALMAE-FDNP 110
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIV-------------------- 383
N+V+L G C G + L++EY+ G L++ L + S ++
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170
Query: 384 LSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGTM 443
LS ++L I VA+ ++YL ER+ +HRD+ N L+ K+ DF + +
Sbjct: 171 LSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 444 GY-------------LAPEYVYSGVPSEKTDVYSFGVVALEV 472
Y + PE ++ + ++DV+++GVV E+
Sbjct: 228 DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 106/263 (40%), Gaps = 46/263 (17%)
Query: 310 AVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCE-GNELVLVYEYLPNG 368
VAVK K +E + H N+V L G C + G L+++ E+ G
Sbjct: 61 TVAVKML-KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 369 SLDKILHNNSSSSI----------VLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKA 418
+L L + + + L+ E + VA + +L R+ IHRD+ A
Sbjct: 120 NLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAA 176
Query: 419 CNILLDAEFNAKLGDF----------------EATIPAGTMGYLAPEYVYSGVPSEKTDV 462
NILL + K+ DF +A +P + ++APE ++ V + ++DV
Sbjct: 177 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP---LKWMAPETIFDRVYTIQSDV 233
Query: 463 YSFGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLM 521
+SFGV+ E+ + G SP G I + K+G + A D+ M
Sbjct: 234 WSFGVLLWEIFSLGASPY--PGVKIDEEFCRRLKEGTRMRAPDY---------TTPEMYQ 282
Query: 522 VGLSCVHPNHEKRPSVKEAARIL 544
L C H +RP+ E L
Sbjct: 283 TMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 83/204 (40%), Gaps = 20/204 (9%)
Query: 286 FNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
F K +G+G+ V+KG V + E E ++ C +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYV 67
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
+ G + +L ++ EYL GS +L ++ I+ + L YLH
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDYLHS 122
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAPEYVYSG 454
E + IHRD+KA N+LL KL DF + GT ++APE +
Sbjct: 123 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS 179
Query: 455 VPSEKTDVYSFGVVALEVAAGKSP 478
K D++S G+ A+E+A G+ P
Sbjct: 180 AYDSKADIWSLGITAIELARGEPP 203
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+G V+ G+ VA+K KP + + F E M LRH+ LVQL
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTM--SPEAFLQEAQVMKK-LRHEKLVQLYAV 247
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
E + +V EY+ GSL L + + L + +++ +AS ++Y+
Sbjct: 248 VSE-EPIYIVGEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQIASGMAYVER---MNY 301
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
+HRD++A NIL+ K+ DF E T G + + APE G + K
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 362 SDVWSFGILLTELTTKGRVP 381
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+G V+ G+ VA+K + N + F E M LRH+ LVQL
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGN---MSPEAFLQEAQVMKK-LRHEKLVQLYAV 248
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
E + +V EY+ GSL L + L + +++ +AS ++Y+
Sbjct: 249 VSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVER---MNY 302
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
+HRD++A NIL+ K+ DF E T G + + APE G + K
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 362
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 363 SDVWSFGILLTELTTKGRVP 382
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 23/202 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V G VA+K ++ + E + F E M L H+ LVQL G
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMN-LSHEKLVQLYGV 72
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
C + + ++ EY+ NG L L ++ L + V A+ YL +Q
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHR---FQTQQLLEMCKDVCEAMEYLE---SKQF 126
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
+HRD+ A N L++ + K+ DF E T G+ + + PE + S K
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 186
Query: 460 TDVYSFGVVALEV-AAGKSPVD 480
+D+++FGV+ E+ + GK P +
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYE 208
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 23/202 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V G VA+K ++ + E + F E M L H+ LVQL G
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMN-LSHEKLVQLYGV 67
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
C + + ++ EY+ NG L L ++ L + V A+ YL +Q
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYLREMRHR---FQTQQLLEMCKDVCEAMEYLE---SKQF 121
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
+HRD+ A N L++ + K+ DF E T G+ + + PE + S K
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 181
Query: 460 TDVYSFGVVALEV-AAGKSPVD 480
+D+++FGV+ E+ + GK P +
Sbjct: 182 SDIWAFGVLMWEIYSLGKMPYE 203
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 90/219 (41%), Gaps = 47/219 (21%)
Query: 291 IVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL-- 348
++G G VYKGSL VAVK F NR +N + + H N+ +
Sbjct: 20 LIGRGRYGAVYKGSLDER-PVAVKVFSFANR----QNFINEKNIYRVPLMEHDNIARFIV 74
Query: 349 --QGWCCEGN-ELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
+ +G E +LV EY PNGSL K L ++S W + V L+YLH
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-----DWVSSCRLAHSVTRGLAYLHT 129
Query: 406 ECER------QIIHRDVKACNILLDAEFNAKLGDF-------------------EATIPA 440
E R I HRD+ + N+L+ + + DF A
Sbjct: 130 ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV 189
Query: 441 GTMGYLAPEYVYSGV-------PSEKTDVYSFGVVALEV 472
GT+ Y+APE + V ++ D+Y+ G++ E+
Sbjct: 190 GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 83/204 (40%), Gaps = 20/204 (9%)
Query: 286 FNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
F K +G+G+ V+KG V + E E ++ C +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYV 82
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
+ G + +L ++ EYL GS +L ++ I+ + L YLH
Sbjct: 83 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDYLHS 137
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAPEYVYSG 454
E + IHRD+KA N+LL KL DF + GT ++APE +
Sbjct: 138 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS 194
Query: 455 VPSEKTDVYSFGVVALEVAAGKSP 478
K D++S G+ A+E+A G+ P
Sbjct: 195 AYDSKADIWSLGITAIELARGEPP 218
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 290 RIVGEGASATV-YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +G+G A V + +G VA+K +K + E M L H N+V+L
Sbjct: 18 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMK-ILNHPNIVKL 76
Query: 349 QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
L L+ EY G + L + + K IV SA+ Y H+
Sbjct: 77 FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV----SAVQYCHQ--- 129
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF----EATIPA------GTMGYLAPEYVYSGVPSE 458
++I+HRD+KA N+LLDA+ N K+ DF E T+ G+ Y APE ++ G +
Sbjct: 130 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPE-LFQGKKYD 188
Query: 459 --KTDVYSFGVVALEVAAGKSPVD 480
+ DV+S GV+ + +G P D
Sbjct: 189 GPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 111/286 (38%), Gaps = 48/286 (16%)
Query: 292 VGEGASATVYKGSL-------PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
+GEGA V P + K + E + +E M +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHN------------NSSSSIVLSWEKRLNI 392
++ L G C + L ++ EY G+L + L N ++++ ++
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 393 VLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGTMGY------- 445
+A + YL ++ IHRD+ A N+L+ K+ DF + Y
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 446 ------LAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGK 498
+APE ++ V + ++DV+SFGV+ E+ G SP + V+ ++ L K+G
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG---IPVEELFKLLKEGH 276
Query: 499 LLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARIL 544
+D + M+ C H +RP+ K+ L
Sbjct: 277 RMDKP---------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+G V+ G+ VA+K KP + + F E M LRH+ LVQL
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTM--SPEAFLQEAQVMKK-LRHEKLVQLYAV 81
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
E + +V EY+ GSL L + L + +++ +AS ++Y+
Sbjct: 82 VSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVER---MNY 135
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
+HRD++A NIL+ K+ DF E T G + + APE G + K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+G V+ G+ VA+K KP + + F E M LRH+ LVQL
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTM--SPEAFLQEAQVMKK-LRHEKLVQLYAV 330
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
E + +V EY+ GSL L + + L + +++ +AS ++Y+
Sbjct: 331 VSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQIASGMAYVER---MNY 384
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
+HRD++A NIL+ K+ DF E T G + + APE G + K
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 444
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 445 SDVWSFGILLTELTTKGRVP 464
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 23/202 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V G VA+K ++ + E + F E M L H+ LVQL G
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMN-LSHEKLVQLYGV 87
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
C + + ++ EY+ NG L L ++ L + V A+ YL +Q
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHR---FQTQQLLEMCKDVCEAMEYLE---SKQF 141
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
+HRD+ A N L++ + K+ DF E T G+ + + PE + S K
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSK 201
Query: 460 TDVYSFGVVALEV-AAGKSPVD 480
+D+++FGV+ E+ + GK P +
Sbjct: 202 SDIWAFGVLMWEIYSLGKMPYE 223
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 23/202 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V G VA+K ++ + E + F E M L H+ LVQL G
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMN-LSHEKLVQLYGV 78
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
C + + ++ EY+ NG L L ++ L + V A+ YL +Q
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYLREMRHR---FQTQQLLEMCKDVCEAMEYLE---SKQF 132
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
+HRD+ A N L++ + K+ DF E T G+ + + PE + S K
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 192
Query: 460 TDVYSFGVVALEV-AAGKSPVD 480
+D+++FGV+ E+ + GK P +
Sbjct: 193 SDIWAFGVLMWEIYSLGKMPYE 214
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 26/204 (12%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+GA VYK +A + + E + E +A C H N+V+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKV-IDTKSEEELEDYMVEIDILASC-DHPNIVKLLDA 102
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVL-GVASALSYLHEECERQ 410
N L ++ E+ G++D ++ E ++ +V AL+YLH+ +
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLT----ESQIQVVCKQTLDALNYLHD---NK 155
Query: 411 IIHRDVKACNILLDAEFNAKLGDFEATIP-----------AGTMGYLAPEYVYSGVPSE- 458
IIHRD+KA NIL + + KL DF + GT ++APE V +
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 459 ----KTDVYSFGVVALEVAAGKSP 478
K DV+S G+ +E+A + P
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 26/204 (12%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+GA VYK +A + + E + E +A C H N+V+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKV-IDTKSEEELEDYMVEIDILASC-DHPNIVKLLDA 102
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVL-GVASALSYLHEECERQ 410
N L ++ E+ G++D ++ E ++ +V AL+YLH+ +
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLT----ESQIQVVCKQTLDALNYLHD---NK 155
Query: 411 IIHRDVKACNILLDAEFNAKLGDFEATIP-----------AGTMGYLAPEYVYSGVPSE- 458
IIHRD+KA NIL + + KL DF + GT ++APE V +
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDR 215
Query: 459 ----KTDVYSFGVVALEVAAGKSP 478
K DV+S G+ +E+A + P
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 26/204 (12%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+GA VYK +A + + E + E +A C H N+V+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKV-IDTKSEEELEDYMVEIDILASC-DHPNIVKLLDA 102
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVL-GVASALSYLHEECERQ 410
N L ++ E+ G++D ++ E ++ +V AL+YLH+ +
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLT----ESQIQVVCKQTLDALNYLHD---NK 155
Query: 411 IIHRDVKACNILLDAEFNAKLGDFEATIP-----------AGTMGYLAPEYVYSGVPSE- 458
IIHRD+KA NIL + + KL DF + GT ++APE V +
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 459 ----KTDVYSFGVVALEVAAGKSP 478
K DV+S G+ +E+A + P
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 103/250 (41%), Gaps = 49/250 (19%)
Query: 249 LIKKKRHDGRSKEDHVCTVQRVPMRLALTDIKQATLGFNKNRIVGEGASATVYKGSLPSG 308
+ +K++HDGR K H I TLG VG V K L +G
Sbjct: 3 MAEKQKHDGRVKIGHY--------------ILGDTLG------VGTFGKVKVGKHEL-TG 41
Query: 309 GAVAVKRFEKPN-RVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPN 367
VAVK + R E + RH ++++L +++ +V EY+
Sbjct: 42 HKVAVKILNRQKIRSLDVVGKIRREIQNLK-LFRHPHIIKLYQVISTPSDIFMVMEYVSG 100
Query: 368 GSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAE 426
G L D I N L ++ + + S + Y H ++HRD+K N+LLDA
Sbjct: 101 GELFDYICKNGR-----LDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAH 152
Query: 427 FNAKLGDFEAT----------IPAGTMGYLAPEYV----YSGVPSEKTDVYSFGVVALEV 472
NAK+ DF + G+ Y APE + Y+G + D++S GV+ +
Sbjct: 153 MNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAG---PEVDIWSSGVILYAL 209
Query: 473 AAGKSPVDND 482
G P D+D
Sbjct: 210 LCGTLPFDDD 219
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 23/202 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V G VA+K ++ + E + F E M L H+ LVQL G
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMN-LSHEKLVQLYGV 72
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
C + + ++ EY+ NG L L ++ L + V A+ YL +Q
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHR---FQTQQLLEMCKDVCEAMEYLE---SKQF 126
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
+HRD+ A N L++ + K+ DF E T G+ + + PE + S K
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSK 186
Query: 460 TDVYSFGVVALEV-AAGKSPVD 480
+D+++FGV+ E+ + GK P +
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYE 208
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+G V+ G+ VA+K KP + + F E M LRH+ LVQL
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTM--SPEAFLQEAQVMKK-LRHEKLVQLYAV 78
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
E + +V EY+ GSL L + + L + +++ +AS ++Y+
Sbjct: 79 VSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLP--QLVDMSAQIASGMAYVER---MNY 132
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
+HRD++A NIL+ K+ DF E T G + + APE G + K
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 193 SDVWSFGILLTELTTKGRVP 212
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+G V+ G+ VA+K KP + + F E M LRH+ LVQL
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTM--SPEAFLQEAQVMKK-LRHEKLVQLYAV 81
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
E + +V EY+ GSL L + L + +++ +AS ++Y+
Sbjct: 82 VSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVER---MNY 135
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
+HRD++A NIL+ K+ DF E T G + + APE G + K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 111/286 (38%), Gaps = 48/286 (16%)
Query: 292 VGEGASATVYKGSL-------PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
+GEGA V P + K + E + +E M +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHN------------NSSSSIVLSWEKRLNI 392
++ L G C + L ++ EY G+L + L N ++++ ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 393 VLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGTMGY------- 445
+A + YL ++ IHRD+ A N+L+ K+ DF + Y
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 446 ------LAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGK 498
+APE ++ V + ++DV+SFGV+ E+ G SP + V+ ++ L K+G
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG---IPVEELFKLLKEGH 276
Query: 499 LLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARIL 544
+D + M+ C H +RP+ K+ L
Sbjct: 277 RMDKP---------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 27/216 (12%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
+ + +G G A V + +G VA+K +K N + TE + LRH++
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDK-NTLGSDLPRIKTEIEALKN-LRHQH 69
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
+ QL N++ +V EY P G L D I+ + LS E+ + + SA++Y+
Sbjct: 70 ICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR-----LSEEETRVVFRQIVSAVAYV 124
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF------------EATIPAGTMGYLAPEYV 451
H + HRD+K N+L D KL DF G++ Y APE +
Sbjct: 125 HSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELI 181
Query: 452 Y--SGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S + SE DV+S G++ + G P D+D +
Sbjct: 182 QGKSYLGSE-ADVWSMGILLYVLMCGFLPFDDDNVM 216
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+G V+ G+ VA+K KP + + F E M LRH+ LVQL
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTM--SPEAFLQEAQVMKK-LRHEKLVQLYAV 72
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
E + +V EY+ GSL L + L + +++ +AS ++Y+
Sbjct: 73 VSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVER---MNY 126
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
+HRD++A NIL+ K+ DF E T G + + APE G + K
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 187 SDVWSFGILLTELTTKGRVP 206
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 83/204 (40%), Gaps = 20/204 (9%)
Query: 286 FNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
F K +G+G+ V+KG V + E E ++ C +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYV 87
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
+ G + +L ++ EYL GS +L ++ I+ + L YLH
Sbjct: 88 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDYLHS 142
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAPEYVYSG 454
E + IHRD+KA N+LL KL DF + GT ++APE +
Sbjct: 143 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS 199
Query: 455 VPSEKTDVYSFGVVALEVAAGKSP 478
K D++S G+ A+E+A G+ P
Sbjct: 200 AYDSKADIWSLGITAIELARGEPP 223
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 107/261 (40%), Gaps = 42/261 (16%)
Query: 310 AVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGS 369
VAVK K + E + +E M +HKN++ L G C + L ++ EY G+
Sbjct: 56 TVAVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 114
Query: 370 LDKILHN------------NSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVK 417
L + L N ++++ ++ +A + YL ++ IHRD+
Sbjct: 115 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLT 171
Query: 418 ACNILLDAEFNAKLGDFEATIPAGTMGY-------------LAPEYVYSGVPSEKTDVYS 464
A N+L+ K+ DF + Y +APE ++ V + ++DV+S
Sbjct: 172 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 231
Query: 465 FGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLMVG 523
FGV+ E+ G SP + V+ ++ L K+G +D + M+
Sbjct: 232 FGVLMWEIFTLGGSPYPG---IPVEELFKLLKEGHRMDKP---------ANCTNELYMMM 279
Query: 524 LSCVHPNHEKRPSVKEAARIL 544
C H +RP+ K+ L
Sbjct: 280 RDCWHAVPSQRPTFKQLVEDL 300
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 107/261 (40%), Gaps = 42/261 (16%)
Query: 310 AVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGS 369
VAVK K + E + +E M +HKN++ L G C + L ++ EY G+
Sbjct: 58 TVAVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 116
Query: 370 LDKILHN------------NSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVK 417
L + L N ++++ ++ +A + YL ++ IHRD+
Sbjct: 117 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLA 173
Query: 418 ACNILLDAEFNAKLGDFEATIPAGTMGY-------------LAPEYVYSGVPSEKTDVYS 464
A N+L+ K+ DF + Y +APE ++ V + ++DV+S
Sbjct: 174 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 233
Query: 465 FGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLMVG 523
FGV+ E+ G SP + V+ ++ L K+G +D + M+
Sbjct: 234 FGVLMWEIFTLGGSPYPG---IPVEELFKLLKEGHRMDKP---------ANCTNELYMMM 281
Query: 524 LSCVHPNHEKRPSVKEAARIL 544
C H +RP+ K+ L
Sbjct: 282 RDCWHAVPSQRPTFKQLVEDL 302
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+G V+ G+ VA+K KP + + F E M LRH+ LVQL
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTM--SPEAFLQEAQVMKK-LRHEKLVQLYAV 70
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
E + +V EY+ GSL L + L + +++ +AS ++Y+
Sbjct: 71 VSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVER---MNY 124
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
+HRD++A NIL+ K+ DF E T G + + APE G + K
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 184
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 185 SDVWSFGILLTELTTKGRVP 204
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 23/202 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V G VA+K ++ + E + F E M L H+ LVQL G
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMN-LSHEKLVQLYGV 87
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
C + + ++ EY+ NG L L ++ L + V A+ YL +Q
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHR---FQTQQLLEMCKDVCEAMEYLE---SKQF 141
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
+HRD+ A N L++ + K+ DF E T G+ + + PE + S K
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 201
Query: 460 TDVYSFGVVALEV-AAGKSPVD 480
+D+++FGV+ E+ + GK P +
Sbjct: 202 SDIWAFGVLMWEIYSLGKMPYE 223
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+G V+ G+ VA+K KP + + F E M LRH+ LVQL
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTM--SPEAFLQEAQVMKK-LRHEKLVQLYAV 78
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
E + +V EY+ GSL L + + L + +++ +AS ++Y+
Sbjct: 79 VSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLP--QLVDMSAQIASGMAYVER---MNY 132
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
+HRD++A NIL+ K+ DF E T G + + APE G + K
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 193 SDVWSFGILLTELTTKGRVP 212
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 107/261 (40%), Gaps = 42/261 (16%)
Query: 310 AVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGS 369
VAVK K + E + +E M +HKN++ L G C + L ++ EY G+
Sbjct: 61 TVAVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 119
Query: 370 LDKILHN------------NSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVK 417
L + L N ++++ ++ +A + YL ++ IHRD+
Sbjct: 120 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLA 176
Query: 418 ACNILLDAEFNAKLGDFEATIPAGTMGY-------------LAPEYVYSGVPSEKTDVYS 464
A N+L+ K+ DF + Y +APE ++ V + ++DV+S
Sbjct: 177 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 236
Query: 465 FGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLMVG 523
FGV+ E+ G SP + V+ ++ L K+G +D + M+
Sbjct: 237 FGVLMWEIFTLGGSPYPG---IPVEELFKLLKEGHRMDKP---------ANCTNELYMMM 284
Query: 524 LSCVHPNHEKRPSVKEAARIL 544
C H +RP+ K+ L
Sbjct: 285 RDCWHAVPSQRPTFKQLVEDL 305
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 27/203 (13%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G VY+G + K + +E F E A M ++H NLVQL G
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKE-IKHPNLVQLLGV 75
Query: 352 CCEGNELVLVYEYLPNGSLDKIL---HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
C ++ E++ G+L L + S++VL L + ++SA+ YL +
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLE---K 127
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVP 456
+ IHRD+ A N L+ K+ DF T AG + + APE +
Sbjct: 128 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKF 187
Query: 457 SEKTDVYSFGVVALEVAA-GKSP 478
S K+DV++FGV+ E+A G SP
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSP 210
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 106/256 (41%), Gaps = 42/256 (16%)
Query: 310 AVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGS 369
VAVK K + E + +E M +HKN++ L G C + L ++ EY G+
Sbjct: 115 TVAVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 173
Query: 370 LDKILHN------------NSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVK 417
L + L N ++++ ++ +A + YL ++ IHRD+
Sbjct: 174 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLA 230
Query: 418 ACNILLDAEFNAKLGDFEATIPAGTMGY-------------LAPEYVYSGVPSEKTDVYS 464
A N+L+ K+ DF + Y +APE ++ V + ++DV+S
Sbjct: 231 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 290
Query: 465 FGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLMVG 523
FGV+ E+ G SP + V+ ++ L K+G +D + M+
Sbjct: 291 FGVLMWEIFTLGGSPYPG---IPVEELFKLLKEGHRMDKP---------ANCTNELYMMM 338
Query: 524 LSCVHPNHEKRPSVKE 539
C H +RP+ K+
Sbjct: 339 RDCWHAVPSQRPTFKQ 354
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 114/287 (39%), Gaps = 50/287 (17%)
Query: 292 VGEGASATVY--------KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
+GEGA V K VAVK K + E + +E M +HK
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHN------------NSSSSIVLSWEKRLN 391
N++ L G C + L ++ EY G+L + L N ++++ ++
Sbjct: 102 NIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 392 IVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGTMGY------ 445
+A + YL ++ IHRD+ A N+L+ K+ DF + Y
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 446 -------LAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKG 497
+APE ++ V + ++DV+SFGV+ E+ G SP + V+ ++ L K+G
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG---IPVEELFKLLKEG 275
Query: 498 KLLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARIL 544
+D + M+ C H +RP+ K+ L
Sbjct: 276 HRMDKP---------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 111/286 (38%), Gaps = 48/286 (16%)
Query: 292 VGEGASATVYKGSL-------PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
+GEGA V P + K + E + +E M +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHN------------NSSSSIVLSWEKRLNI 392
++ L G C + L ++ EY G+L + L N ++++ ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 393 VLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGTMGY------- 445
+A + YL ++ IHRD+ A N+L+ K+ DF + Y
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 446 ------LAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGK 498
+APE ++ V + ++DV+SFGV+ E+ G SP + V+ ++ L K+G
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG---IPVEELFKLLKEGH 276
Query: 499 LLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARIL 544
+D + M+ C H +RP+ K+ L
Sbjct: 277 RMDKP---------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+G V+ G+ VA+K KP + + F E M LRH+ LVQL
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTM--SPEAFLQEAQVMKK-LRHEKLVQLYAV 81
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
E + +V EY+ GSL L + L + +++ +AS ++Y+
Sbjct: 82 VSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVER---MNY 135
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
+HRD++A NIL+ K+ DF E T G + + APE G + K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 82/194 (42%), Gaps = 33/194 (17%)
Query: 311 VAVKRFEKPNRVECARNP-FTTEF---ATMAGCLRHKNLVQL----QGWCCEGNELVLVY 362
VAVK R + AR+P F F A A L H +V + + G +V
Sbjct: 40 VAVKVL----RADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVM 95
Query: 363 EYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNIL 422
EY+ +L I+H ++ ++ + ++ AL++ H+ IIHRDVK NI+
Sbjct: 96 EYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIM 148
Query: 423 LDAEFNAKLGDF--------------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVV 468
+ A K+ DF + GT YL+PE ++DVYS G V
Sbjct: 149 ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 469 ALEVAAGKSPVDND 482
EV G+ P D
Sbjct: 209 LYEVLTGEPPFTGD 222
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 116/287 (40%), Gaps = 50/287 (17%)
Query: 292 VGEGASATVY--------KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
+GEGA V K VAVK K + E + +E M +HK
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHN------------NSSSSIVLSWEKRLN 391
N++ L G C + L ++ EY G+L + L N ++++ ++
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 392 IVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-------------EATI 438
+A + YL ++ IHRD+ A N+L+ K+ DF + T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 439 PAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKG 497
+ ++APE ++ V + ++DV+SFGV+ E+ G SP + V+ ++ L K+G
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG---IPVEELFKLLKEG 275
Query: 498 KLLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARIL 544
+D + M+ C H +RP+ K+ L
Sbjct: 276 HRMDKP---------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 35/221 (15%)
Query: 279 IKQATLGFNKNRIVGEGASATVYKGSLPSGG--------AVAVKRFEKPNRVECARNPFT 330
I+ L FN++ +G+G ++KG G V +K +K +R + + F
Sbjct: 5 IRNEDLIFNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHR-NYSESFF- 60
Query: 331 TEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRL 390
E A+M L HK+LV G C G+E +LV E++ GSLD L N + +L W +L
Sbjct: 61 -EAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINIL-W--KL 116
Query: 391 NIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGD---FEATIPAGTMGYLA 447
+ +A+A+ +L E +IH +V A NILL E + K G+ + + P ++ L
Sbjct: 117 EVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP 173
Query: 448 PEYVYSGVP-------------SEKTDVYSFGVVALEVAAG 475
+ + +P + TD +SFG E+ +G
Sbjct: 174 KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 22/204 (10%)
Query: 290 RIVGEGASATV-YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +G+G A V + +G VA+K +K + E M L H N+V+L
Sbjct: 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMK-ILNHPNIVKL 79
Query: 349 QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
L L+ EY G + L + + K IV SA+ Y H+
Sbjct: 80 FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV----SAVQYCHQ--- 132
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF----EATIPA------GTMGYLAPEYVYSGVPSE 458
++I+HRD+KA N+LLDA+ N K+ DF E T+ G Y APE ++ G +
Sbjct: 133 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPE-LFQGKKYD 191
Query: 459 --KTDVYSFGVVALEVAAGKSPVD 480
+ DV+S GV+ + +G P D
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 27/203 (13%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G VY+G + K + +E F E A M ++H NLVQL G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKE-IKHPNLVQLLGV 77
Query: 352 CCEGNELVLVYEYLPNGSLDKIL---HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
C ++ E++ G+L L + S++VL L + ++SA+ YL +
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLE---K 129
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVP 456
+ IHRD+ A N L+ K+ DF T AG + + APE +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 457 SEKTDVYSFGVVALEVAA-GKSP 478
S K+DV++FGV+ E+A G SP
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 27/203 (13%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G VY+G + K + +E F E A M ++H NLVQL G
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKE-IKHPNLVQLLGV 75
Query: 352 CCEGNELVLVYEYLPNGSLDKIL---HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
C ++ E++ G+L L + S++VL L + ++SA+ YL +
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLE---K 127
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVP 456
+ IHRD+ A N L+ K+ DF T AG + + APE +
Sbjct: 128 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKF 187
Query: 457 SEKTDVYSFGVVALEVAA-GKSP 478
S K+DV++FGV+ E+A G SP
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSP 210
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 27/203 (13%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G VY+G + K + +E F E A M ++H NLVQL G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKE-IKHPNLVQLLGV 77
Query: 352 CCEGNELVLVYEYLPNGSLDKIL---HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
C ++ E++ G+L L + S++VL L + ++SA+ YL +
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLE---K 129
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVP 456
+ IHRD+ A N L+ K+ DF T AG + + APE +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 457 SEKTDVYSFGVVALEVAA-GKSP 478
S K+DV++FGV+ E+A G SP
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 115/282 (40%), Gaps = 50/282 (17%)
Query: 292 VGEGASATVY--------KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
+GEGA V K VAVK K + E + +E M +HK
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHN------------NSSSSIVLSWEKRLN 391
N++ L G C + L ++ EY G+L + L N ++++ ++
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVS 161
Query: 392 IVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-------------EATI 438
+A + YL ++ IHRD+ A N+L+ K+ DF + T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 439 PAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKG 497
+ ++APE ++ V + ++DV+SFGV+ E+ G SP + V+ ++ L K+G
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG---IPVEELFKLLKEG 275
Query: 498 KLLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKE 539
+D + M+ C H +RP+ K+
Sbjct: 276 HRMDKP---------ANCTNELYMMMRDCWHAVPSQRPTFKQ 308
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 95/213 (44%), Gaps = 28/213 (13%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +GEGA+ V + + AVAVK + V+C N + + L H+N+V+
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHENVVKF 69
Query: 349 QGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
G EGN L EY G L D+I I + + + + YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 408 ERQIIHRDVKACNILLDAEFNAKLGDFE-ATI------------PAGTMGYLAPEYV-YS 453
I HRD+K N+LLD N K+ DF AT+ GT+ Y+APE +
Sbjct: 123 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVD--NDGC 484
+E DV+S G+V + AG+ P D +D C
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 214
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 27/203 (13%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G VY+G + K + +E F E A M ++H NLVQL G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKE-IKHPNLVQLLGV 82
Query: 352 CCEGNELVLVYEYLPNGSLDKIL---HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
C ++ E++ G+L L + S++VL L + ++SA+ YL +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLE---K 134
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVP 456
+ IHRD+ A N L+ K+ DF T AG + + APE +
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 194
Query: 457 SEKTDVYSFGVVALEVAA-GKSP 478
S K+DV++FGV+ E+A G SP
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSP 217
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 285 GFNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
F K +GEG VYK + +G VA+K+ E + E + + L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHP 62
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
N+V+L N+L LV+E+L + L K + ++ + I L K + + + LS+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLSFC 119
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVY 452
H +++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 453 S-GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 27/203 (13%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G VY+G + K + +E F E A M ++H NLVQL G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKE-IKHPNLVQLLGV 77
Query: 352 CCEGNELVLVYEYLPNGSLDKIL---HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
C ++ E++ G+L L + S++VL L + ++SA+ YL +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLE---K 129
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVP 456
+ IHRD+ A N L+ K+ DF T AG + + APE +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 457 SEKTDVYSFGVVALEVAA-GKSP 478
S K+DV++FGV+ E+A G SP
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 27/203 (13%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G VY+G + K + +E F E A M ++H NLVQL G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKE-IKHPNLVQLLGV 77
Query: 352 CCEGNELVLVYEYLPNGSLDKIL---HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
C ++ E++ G+L L + S++VL L + ++SA+ YL +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLE---K 129
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVP 456
+ IHRD+ A N L+ K+ DF T AG + + APE +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 457 SEKTDVYSFGVVALEVAA-GKSP 478
S K+DV++FGV+ E+A G SP
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+G V+ G+ VA+K KP + + F E M +RH+ LVQL
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTM--SPEAFLQEAQVMKK-IRHEKLVQLYAV 81
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
E + +V EY+ GSL L + L + +++ +AS ++Y+
Sbjct: 82 VSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVER---MNY 135
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
+HRD++A NIL+ K+ DF E T G + + APE G + K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 114/274 (41%), Gaps = 54/274 (19%)
Query: 311 VAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSL 370
VAVK + + + +E M+ +H+N+V L G C G ++++ EY G L
Sbjct: 64 VAVKMLKSTAHAD-EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 122
Query: 371 DKILHNNSSSSI-------------------VLSWEKRLNIVLGVASALSYLHEECERQI 411
L + + + L L+ VA +++L +
Sbjct: 123 LNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNC 179
Query: 412 IHRDVKACNILLDAEFNAKLGDF----------------EATIPAGTMGYLAPEYVYSGV 455
IHRDV A N+LL AK+GDF A +P + ++APE ++ V
Sbjct: 180 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP---VKWMAPESIFDCV 236
Query: 456 PSEKTDVYSFGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRK 514
+ ++DV+S+G++ E+ + G +P G ++ + L K G + F + ++
Sbjct: 237 YTVQSDVWSYGILLWEIFSLGLNPY--PGILVNSKFYKLVKDGYQMAQPAFAPKNIYS-- 292
Query: 515 EMERMLMVGLSCVHPNHEKRPSVKEAARILKGEA 548
+M + P H RP+ ++ L+ +A
Sbjct: 293 -----IMQACWALEPTH--RPTFQQICSFLQEQA 319
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 27/203 (13%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G VY+G + K + +E F E A M ++H NLVQL G
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKE-IKHPNLVQLLGV 75
Query: 352 CCEGNELVLVYEYLPNGSLDKIL---HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
C ++ E++ G+L L + S++VL L + ++SA+ YL +
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLE---K 127
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVP 456
+ IHRD+ A N L+ K+ DF T AG + + APE +
Sbjct: 128 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKF 187
Query: 457 SEKTDVYSFGVVALEVAA-GKSP 478
S K+DV++FGV+ E+A G SP
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSP 210
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 110/281 (39%), Gaps = 48/281 (17%)
Query: 292 VGEGASATVYKGSL-------PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
+GEGA V P + K + E + +E M +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHN------------NSSSSIVLSWEKRLNI 392
++ L G C + L ++ EY G+L + L N ++++ ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 393 VLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGTMGY------- 445
+A + YL ++ IHRD+ A N+L+ ++ DF + Y
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 446 ------LAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGK 498
+APE ++ V + ++DV+SFGV+ E+ G SP + V+ ++ L K+G
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG---IPVEELFKLLKEGH 276
Query: 499 LLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKE 539
+D + M+ C H +RP+ K+
Sbjct: 277 RMDKP---------ANCTNELYMMMRDCWHAVPSQRPTFKQ 308
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 115/294 (39%), Gaps = 53/294 (18%)
Query: 286 FNKNRIVGEGASATVYKG------SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGC 339
N + +G GA V + + VAVK K +E +
Sbjct: 30 LNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML-KEGATHSEHRALMSELKILIHI 88
Query: 340 LRHKNLVQLQGWCCE-GNELVLVYEYLPNGSLDKILHNNSSSSI-----------VLSWE 387
H N+V L G C + G L+++ E+ G+L L + + + L+ E
Sbjct: 89 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLE 148
Query: 388 KRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF------------- 434
+ VA + +L R+ IHRD+ A NILL + K+ DF
Sbjct: 149 HLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 205
Query: 435 ---EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSPVDNDGCVIVDWV 490
+A +P + ++APE ++ V + ++DV+SFGV+ E+ + G SP G I +
Sbjct: 206 RKGDARLP---LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVKIDEEF 260
Query: 491 WNLRKKGKLLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARIL 544
K+G + A D+ M L C H +RP+ E L
Sbjct: 261 CRRLKEGTRMRAPDY---------TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 44/221 (19%)
Query: 289 NRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQ 347
+ ++GEGA A V SL +G AVK EK + +R+ E T+ C +KN+++
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEK--QAGHSRSRVFREVETLYQCQGNKNILE 75
Query: 348 LQGWCCEGNELVLVYEYLPNGS----LDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L + + LV+E L GS + K H N + +V VA+AL +L
Sbjct: 76 LIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREAS--------RVVRDVAAALDFL 127
Query: 404 HEECERQIIHRDVKACNILLDAEFN---AKLGDF------------------EATIPAGT 442
H + I HRD+K NIL ++ K+ DF E T P G+
Sbjct: 128 H---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGS 184
Query: 443 MGYLAPEYV-----YSGVPSEKTDVYSFGVVALEVAAGKSP 478
Y+APE V + ++ D++S GVV + +G P
Sbjct: 185 AEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 30/216 (13%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFE------KPNRVECARNPFTTEFATMAG 338
++ ++G G S+ V + +G AVK E P ++E R E +
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 339 CLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVAS 398
H +++ L + + LV++ + G L L + + LS ++ +I+ +
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL----TEKVALSEKETRSIMRSLLE 211
Query: 399 ALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIP----------AGTMGYLAP 448
A+S+LH I+HRD+K NILLD +L DF + GT GYLAP
Sbjct: 212 AVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAP 268
Query: 449 EYVYSGVPS------EKTDVYSFGVVALEVAAGKSP 478
E + + ++ D+++ GV+ + AG P
Sbjct: 269 EILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 91/204 (44%), Gaps = 22/204 (10%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +G+G A V + +G VAVK +K + E M L H N+V+L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK-VLNHPNIVKL 78
Query: 349 QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
L LV EY G + L + + K IV SA+ Y H++
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCHQKF- 133
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF----EATIP------AGTMGYLAPEYVYSGVPSE 458
I+HRD+KA N+LLDA+ N K+ DF E T G+ Y APE ++ G +
Sbjct: 134 --IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE-LFQGKKYD 190
Query: 459 --KTDVYSFGVVALEVAAGKSPVD 480
+ DV+S GV+ + +G P D
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 27/203 (13%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G VY+G + K + +E F E A M ++H NLVQL G
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKE-IKHPNLVQLLGV 78
Query: 352 CCEGNELVLVYEYLPNGSLDKIL---HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
C ++ E++ G+L L + +++VL L + ++SA+ YL +
Sbjct: 79 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---K 130
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVP 456
+ IHRD+ A N L+ K+ DF T AG + + APE +
Sbjct: 131 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKF 190
Query: 457 SEKTDVYSFGVVALEVAA-GKSP 478
S K+DV++FGV+ E+A G SP
Sbjct: 191 SIKSDVWAFGVLLWEIATYGMSP 213
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 93/213 (43%), Gaps = 28/213 (13%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +GEGA V + + AVAVK + V+C N + + L H+N+V+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEIXINKMLNHENVVKF 70
Query: 349 QGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
G EGN L EY G L D+I I + + + + YLH
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 408 ERQIIHRDVKACNILLDAEFNAKLGDFE-ATI------------PAGTMGYLAPEYV-YS 453
I HRD+K N+LLD N K+ DF AT+ GT+ Y+APE +
Sbjct: 124 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 182
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDN--DGC 484
+E DV+S G+V + AG+ P D D C
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 215
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 90/200 (45%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+G V+ G+ VA+K KP + + F E M LRH+ LVQL
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTM--SPEAFLQEAQVMKK-LRHEKLVQLYAV 81
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
E + +V EY+ GSL L + L + +++ +AS ++Y+
Sbjct: 82 VSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVER---MNY 135
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
+HRD+ A NIL+ K+ DF E T G + + APE G + K
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +GEGA V + + AVAVK + V+C N + + L H+N+V+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINAMLNHENVVKF 70
Query: 349 QGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
G EGN L EY G L D+I I + + + + YLH
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 408 ERQIIHRDVKACNILLDAEFNAKLGDFE-ATI------------PAGTMGYLAPEYV-YS 453
I HRD+K N+LLD N K+ DF AT+ GT+ Y+APE +
Sbjct: 124 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVD--NDGC 484
+E DV+S G+V + AG+ P D +D C
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 215
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 91/204 (44%), Gaps = 22/204 (10%)
Query: 290 RIVGEGASATV-YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +G+G A V + +G VAVK +K + E M L H N+V+L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK-VLNHPNIVKL 78
Query: 349 QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
L LV EY G + L + + K IV SA+ Y H++
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCHQKF- 133
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF----EATIP------AGTMGYLAPEYVYSGVPSE 458
I+HRD+KA N+LLDA+ N K+ DF E T G+ Y APE ++ G +
Sbjct: 134 --IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE-LFQGKKYD 190
Query: 459 --KTDVYSFGVVALEVAAGKSPVD 480
+ DV+S GV+ + +G P D
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+G V+ G+ VA+K KP + + F E M LRH+ LVQL
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTM--SPEAFLQEAQVMKK-LRHEKLVQLYAV 81
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
E + +V EY+ G L L + L + +++ +AS ++Y+
Sbjct: 82 VSE-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVER---MNY 135
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
+HRD++A NIL+ K+ DF E T G + + APE G + K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 93/213 (43%), Gaps = 28/213 (13%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +GEGA V + + AVAVK + V+C N + + L H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEIXINKMLNHENVVKF 69
Query: 349 QGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
G EGN L EY G L D+I I + + + + YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 408 ERQIIHRDVKACNILLDAEFNAKLGDFE-ATI------------PAGTMGYLAPEYV-YS 453
I HRD+K N+LLD N K+ DF AT+ GT+ Y+APE +
Sbjct: 123 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDN--DGC 484
+E DV+S G+V + AG+ P D D C
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 214
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 105/260 (40%), Gaps = 48/260 (18%)
Query: 310 AVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCE-GNELVLVYEYLPNG 368
VAVK K +E + H N+V L G C + G L+++ E+ G
Sbjct: 50 TVAVKML-KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 108
Query: 369 SLDKILHNNSSSSI------------VLSWEKRLNIVLGVASALSYLHEECERQIIHRDV 416
+L L + + + L+ E + VA + +L R+ IHRD+
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 165
Query: 417 KACNILLDAEFNAKLGDF----------------EATIPAGTMGYLAPEYVYSGVPSEKT 460
A NILL + K+ DF +A +P + ++APE ++ V + ++
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP---LKWMAPETIFDRVYTIQS 222
Query: 461 DVYSFGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERM 519
DV+SFGV+ E+ + G SP G I + K+G + A D+ M
Sbjct: 223 DVWSFGVLLWEIFSLGASPY--PGVKIDEEFCRRLKEGTRMRAPDY---------TTPEM 271
Query: 520 LMVGLSCVHPNHEKRPSVKE 539
L C H +RP+ E
Sbjct: 272 YQTMLDCWHGEPSQRPTFSE 291
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 106/265 (40%), Gaps = 48/265 (18%)
Query: 310 AVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCE-GNELVLVYEYLPNG 368
VAVK K +E + H N+V L G C + G L+++ E+ G
Sbjct: 61 TVAVKML-KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 369 SLDKILHNNSSSSI------------VLSWEKRLNIVLGVASALSYLHEECERQIIHRDV 416
+L L + + + L+ E + VA + +L R+ IHRD+
Sbjct: 120 NLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 176
Query: 417 KACNILLDAEFNAKLGDF----------------EATIPAGTMGYLAPEYVYSGVPSEKT 460
A NILL + K+ DF +A +P + ++APE ++ V + ++
Sbjct: 177 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP---LKWMAPETIFDRVYTIQS 233
Query: 461 DVYSFGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERM 519
DV+SFGV+ E+ + G SP G I + K+G + A D+ M
Sbjct: 234 DVWSFGVLLWEIFSLGASPY--PGVKIDEEFCRRLKEGTRMRAPDY---------TTPEM 282
Query: 520 LMVGLSCVHPNHEKRPSVKEAARIL 544
L C H +RP+ E L
Sbjct: 283 YQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 123/288 (42%), Gaps = 49/288 (17%)
Query: 289 NRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRV------ECARNPFTTEFATMAGCLRH 342
+R +G+G+ VY+G A V + E RV E A EF A ++
Sbjct: 24 SRELGQGSFGMVYEGV-----AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 78
Query: 343 KN---LVQLQGWCCEGNELVLVYEYLPNGSLDKILHN---NSSSSIVL---SWEKRLNIV 393
N +V+L G +G +++ E + G L L + ++ VL S K + +
Sbjct: 79 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 138
Query: 394 LGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT--------IPAGTMG- 444
+A ++YL+ + +HRD+ A N ++ +F K+GDF T G G
Sbjct: 139 GEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGL 195
Query: 445 ----YLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVDNDGCVIVDWVWNLRKKGKL 499
+++PE + GV + +DV+SFGVV E+A + P + + V +G L
Sbjct: 196 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSNEQVLRFVMEGGL 252
Query: 500 LDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILKGE 547
LD D F E+ RM C N + RPS E +K E
Sbjct: 253 LDKPDNCPDMLF---ELMRM------CWQYNPKMRPSFLEIISSIKEE 291
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 30/210 (14%)
Query: 290 RIVGEGASATVYKGS---LPSGGA---VAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
R +G+G+ VY+G+ + G A VAVK + + R F E + M G H
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNEASVMKGFTCH- 80
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHN------NSSSSIVLSWEKRLNIVLGVA 397
++V+L G +G ++V E + +G L L + N+ + ++ + + +A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT--------IPAGTMG----- 444
++YL+ ++ +HR++ A N ++ +F K+GDF T G G
Sbjct: 141 DGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 445 YLAPEYVYSGVPSEKTDVYSFGVVALEVAA 474
++APE + GV + +D++SFGVV E+ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 27/203 (13%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G VY+G + K + +E F E A M ++H NLVQL G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKE-IKHPNLVQLLGV 82
Query: 352 CCEGNELVLVYEYLPNGSLDKIL---HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
C ++ E++ G+L L + +++VL L + ++SA+ YL +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---K 134
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVP 456
+ IHRD+ A N L+ K+ DF T AG + + APE +
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKF 194
Query: 457 SEKTDVYSFGVVALEVAA-GKSP 478
S K+DV++FGV+ E+A G SP
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSP 217
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +GEGA V + + AVAVK + V+C N + + L H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEIXINKMLNHENVVKF 69
Query: 349 QGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
G EGN L EY G L D+I I + + + + YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 408 ERQIIHRDVKACNILLDAEFNAKLGDFE-ATI------------PAGTMGYLAPEYV-YS 453
I HRD+K N+LLD N K+ DF AT+ GT+ Y+APE +
Sbjct: 123 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVD--NDGC 484
+E DV+S G+V + AG+ P D +D C
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 214
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +GEGA V + + AVAVK + V+C N + + L H+N+V+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHENVVKF 70
Query: 349 QGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
G EGN L EY G L D+I I + + + + YLH
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 408 ERQIIHRDVKACNILLDAEFNAKLGDFE-ATI------------PAGTMGYLAPEYV-YS 453
I HRD+K N+LLD N K+ DF AT+ GT+ Y+APE +
Sbjct: 124 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVD--NDGC 484
+E DV+S G+V + AG+ P D +D C
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 215
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 106/265 (40%), Gaps = 48/265 (18%)
Query: 310 AVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCE-GNELVLVYEYLPNG 368
VAVK K +E + H N+V L G C + G L+++ E+ G
Sbjct: 59 TVAVKML-KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 369 SLDKILHNNSSSSI------------VLSWEKRLNIVLGVASALSYLHEECERQIIHRDV 416
+L L + + + L+ E + VA + +L R+ IHRD+
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 174
Query: 417 KACNILLDAEFNAKLGDF----------------EATIPAGTMGYLAPEYVYSGVPSEKT 460
A NILL + K+ DF +A +P + ++APE ++ V + ++
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLP---LKWMAPETIFDRVYTIQS 231
Query: 461 DVYSFGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERM 519
DV+SFGV+ E+ + G SP G I + K+G + A D+ M
Sbjct: 232 DVWSFGVLLWEIFSLGASPY--PGVKIDEEFCRRLKEGTRMRAPDY---------TTPEM 280
Query: 520 LMVGLSCVHPNHEKRPSVKEAARIL 544
L C H +RP+ E L
Sbjct: 281 YQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 30/210 (14%)
Query: 290 RIVGEGASATVYKGS---LPSGGA---VAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
R +G+G+ VY+G+ + G A VAVK + + R F E + M G H
Sbjct: 24 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNEASVMKGFTCH- 81
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHN------NSSSSIVLSWEKRLNIVLGVA 397
++V+L G +G ++V E + +G L L + N+ + ++ + + +A
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT--------IPAGTMG----- 444
++YL+ ++ +HR++ A N ++ +F K+GDF T G G
Sbjct: 142 DGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 445 YLAPEYVYSGVPSEKTDVYSFGVVALEVAA 474
++APE + GV + +D++SFGVV E+ +
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +GEGA V + + AVAVK + V+C N + + L H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHENVVKF 69
Query: 349 QGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
G EGN L EY G L D+I I + + + + YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 408 ERQIIHRDVKACNILLDAEFNAKLGDFE-ATI------------PAGTMGYLAPEYV-YS 453
I HRD+K N+LLD N K+ DF AT+ GT+ Y+APE +
Sbjct: 123 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVD--NDGC 484
+E DV+S G+V + AG+ P D +D C
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 214
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +GEGA V + + AVAVK + V+C N + + L H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHENVVKF 69
Query: 349 QGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
G EGN L EY G L D+I I + + + + YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 408 ERQIIHRDVKACNILLDAEFNAKLGDFE-ATI------------PAGTMGYLAPEYV-YS 453
I HRD+K N+LLD N K+ DF AT+ GT+ Y+APE +
Sbjct: 123 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVD--NDGC 484
+E DV+S G+V + AG+ P D +D C
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 214
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 123/288 (42%), Gaps = 49/288 (17%)
Query: 289 NRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRV------ECARNPFTTEFATMAGCLRH 342
+R +G+G+ VY+G A V + E RV E A EF A ++
Sbjct: 24 SRELGQGSFGMVYEGV-----AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 78
Query: 343 KN---LVQLQGWCCEGNELVLVYEYLPNGSLDKILHN---NSSSSIVL---SWEKRLNIV 393
N +V+L G +G +++ E + G L L + ++ VL S K + +
Sbjct: 79 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 138
Query: 394 LGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT--------IPAGTMG- 444
+A ++YL+ + +HRD+ A N ++ +F K+GDF T G G
Sbjct: 139 GEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 195
Query: 445 ----YLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVDNDGCVIVDWVWNLRKKGKL 499
+++PE + GV + +DV+SFGVV E+A + P + + V +G L
Sbjct: 196 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSNEQVLRFVMEGGL 252
Query: 500 LDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILKGE 547
LD D F E+ RM C N + RPS E +K E
Sbjct: 253 LDKPDNCPDMLF---ELMRM------CWQYNPKMRPSFLEIISSIKEE 291
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +GEGA V + + AVAVK + V+C N + + L H+N+V+
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHENVVKF 68
Query: 349 QGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
G EGN L EY G L D+I I + + + + YLH
Sbjct: 69 YGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG-- 121
Query: 408 ERQIIHRDVKACNILLDAEFNAKLGDFE-ATI------------PAGTMGYLAPEYV-YS 453
I HRD+K N+LLD N K+ DF AT+ GT+ Y+APE +
Sbjct: 122 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVD--NDGC 484
+E DV+S G+V + AG+ P D +D C
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 213
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 106/265 (40%), Gaps = 48/265 (18%)
Query: 310 AVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCE-GNELVLVYEYLPNG 368
VAVK K +E + H N+V L G C + G L+++ E+ G
Sbjct: 59 TVAVKML-KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 369 SLDKILHNNSSSSI------------VLSWEKRLNIVLGVASALSYLHEECERQIIHRDV 416
+L L + + + L+ E + VA + +L R+ IHRD+
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 174
Query: 417 KACNILLDAEFNAKLGDF----------------EATIPAGTMGYLAPEYVYSGVPSEKT 460
A NILL + K+ DF +A +P + ++APE ++ V + ++
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP---LKWMAPETIFDRVYTIQS 231
Query: 461 DVYSFGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERM 519
DV+SFGV+ E+ + G SP G I + K+G + A D+ M
Sbjct: 232 DVWSFGVLLWEIFSLGASPY--PGVKIDEEFCRRLKEGTRMRAPDY---------TTPEM 280
Query: 520 LMVGLSCVHPNHEKRPSVKEAARIL 544
L C H +RP+ E L
Sbjct: 281 YQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 106/265 (40%), Gaps = 48/265 (18%)
Query: 310 AVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCE-GNELVLVYEYLPNG 368
VAVK K +E + H N+V L G C + G L+++ E+ G
Sbjct: 96 TVAVKML-KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 154
Query: 369 SLDKILHNNSSSSI------------VLSWEKRLNIVLGVASALSYLHEECERQIIHRDV 416
+L L + + + L+ E + VA + +L R+ IHRD+
Sbjct: 155 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 211
Query: 417 KACNILLDAEFNAKLGDF----------------EATIPAGTMGYLAPEYVYSGVPSEKT 460
A NILL + K+ DF +A +P + ++APE ++ V + ++
Sbjct: 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP---LKWMAPETIFDRVYTIQS 268
Query: 461 DVYSFGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERM 519
DV+SFGV+ E+ + G SP G I + K+G + A D+ M
Sbjct: 269 DVWSFGVLLWEIFSLGASPY--PGVKIDEEFCRRLKEGTRMRAPDY---------TTPEM 317
Query: 520 LMVGLSCVHPNHEKRPSVKEAARIL 544
L C H +RP+ E L
Sbjct: 318 YQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 106/265 (40%), Gaps = 48/265 (18%)
Query: 310 AVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCE-GNELVLVYEYLPNG 368
VAVK K +E + H N+V L G C + G L+++ E+ G
Sbjct: 59 TVAVKML-KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 369 SLDKILHNNSSSSI------------VLSWEKRLNIVLGVASALSYLHEECERQIIHRDV 416
+L L + + + L+ E + VA + +L R+ IHRD+
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 174
Query: 417 KACNILLDAEFNAKLGDF----------------EATIPAGTMGYLAPEYVYSGVPSEKT 460
A NILL + K+ DF +A +P + ++APE ++ V + ++
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP---LKWMAPETIFDRVYTIQS 231
Query: 461 DVYSFGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERM 519
DV+SFGV+ E+ + G SP G I + K+G + A D+ M
Sbjct: 232 DVWSFGVLLWEIFSLGASPY--PGVKIDEEFCRRLKEGTRMRAPDY---------TTPEM 280
Query: 520 LMVGLSCVHPNHEKRPSVKEAARIL 544
L C H +RP+ E L
Sbjct: 281 YQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 90/207 (43%), Gaps = 28/207 (13%)
Query: 290 RIVGEGASATV-YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +G+G A V + +G VAVK +K + E M L H N+V+L
Sbjct: 13 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK-VLNHPNIVKL 71
Query: 349 QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNI---VLGVASALSYLHE 405
L LV EY G + L + W K + SA+ Y H+
Sbjct: 72 FEVIETEKTLYLVMEYASGGEVFDYL-------VAHGWMKEKEARAKFRQIVSAVQYCHQ 124
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF----EATIP------AGTMGYLAPEYVYSGV 455
+ I+HRD+KA N+LLDA+ N K+ DF E T G+ Y APE ++ G
Sbjct: 125 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE-LFQGK 180
Query: 456 PSE--KTDVYSFGVVALEVAAGKSPVD 480
+ + DV+S GV+ + +G P D
Sbjct: 181 KYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 95/217 (43%), Gaps = 22/217 (10%)
Query: 277 TDIKQATLGFNKNRIVGEGASATV-YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFAT 335
TD + + + +G+G A V + +G VAVK +K + E
Sbjct: 8 TDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRI 67
Query: 336 MAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLG 395
M L H N+V+L L LV EY G + L + + K IV
Sbjct: 68 MK-ILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV-- 124
Query: 396 VASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF----EATIP------AGTMGY 445
SA+ Y H+ + I+HRD+KA N+LLD + N K+ DF E T+ G+ Y
Sbjct: 125 --SAVQYCHQ---KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPY 179
Query: 446 LAPEYVYSGVPSE--KTDVYSFGVVALEVAAGKSPVD 480
APE ++ G + + DV+S GV+ + +G P D
Sbjct: 180 AAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 123/288 (42%), Gaps = 49/288 (17%)
Query: 289 NRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRV------ECARNPFTTEFATMAGCLRH 342
+R +G+G+ VY+G A V + E RV E A EF A ++
Sbjct: 21 SRELGQGSFGMVYEGV-----AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 75
Query: 343 KN---LVQLQGWCCEGNELVLVYEYLPNGSLDKILHN---NSSSSIVL---SWEKRLNIV 393
N +V+L G +G +++ E + G L L + ++ VL S K + +
Sbjct: 76 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 135
Query: 394 LGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT--------IPAGTMG- 444
+A ++YL+ + +HRD+ A N ++ +F K+GDF T G G
Sbjct: 136 GEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 192
Query: 445 ----YLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVDNDGCVIVDWVWNLRKKGKL 499
+++PE + GV + +DV+SFGVV E+A + P + + V +G L
Sbjct: 193 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSNEQVLRFVMEGGL 249
Query: 500 LDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILKGE 547
LD D F E+ RM C N + RPS E +K E
Sbjct: 250 LDKPDNCPDMLF---ELMRM------CWQYNPKMRPSFLEIISSIKEE 288
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 124/288 (43%), Gaps = 49/288 (17%)
Query: 289 NRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRV------ECARNPFTTEFATMAGCLRH 342
+R +G+G+ VY+G A V + E RV E A EF A ++
Sbjct: 15 SRELGQGSFGMVYEGV-----AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 69
Query: 343 KN---LVQLQGWCCEGNELVLVYEYLPNGSLDKILHN---NSSSSIVL---SWEKRLNIV 393
N +V+L G +G +++ E + G L L + ++ VL S K + +
Sbjct: 70 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 129
Query: 394 LGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT--------IPAGTMG- 444
+A ++YL+ + +HRD+ A N ++ +F K+GDF T G G
Sbjct: 130 GEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGL 186
Query: 445 ----YLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVDNDGCVIVDWVWNLRKKGKL 499
+++PE + GV + +DV+SFGVV E+A + P + + V +G L
Sbjct: 187 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSNEQVLRFVMEGGL 243
Query: 500 LDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILKGE 547
LD D N +M +L + C N + RPS E +K E
Sbjct: 244 LDKPD-------NCPDM--LLELMRMCWQYNPKMRPSFLEIISSIKEE 282
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 105/260 (40%), Gaps = 48/260 (18%)
Query: 310 AVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCE-GNELVLVYEYLPNG 368
VAVK K +E + H N+V L G C + G L+++ E+ G
Sbjct: 50 TVAVKML-KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 369 SLDKILHNNSSSSI------------VLSWEKRLNIVLGVASALSYLHEECERQIIHRDV 416
+L L + + + L+ E + VA + +L R+ IHRD+
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 165
Query: 417 KACNILLDAEFNAKLGDF----------------EATIPAGTMGYLAPEYVYSGVPSEKT 460
A NILL + K+ DF +A +P + ++APE ++ V + ++
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP---LKWMAPETIFDRVYTIQS 222
Query: 461 DVYSFGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERM 519
DV+SFGV+ E+ + G SP G I + K+G + A D+ M
Sbjct: 223 DVWSFGVLLWEIFSLGASPY--PGVKIDEEFCRRLKEGTRMRAPDY---------TTPEM 271
Query: 520 LMVGLSCVHPNHEKRPSVKE 539
L C H +RP+ E
Sbjct: 272 YQTMLDCWHGEPSQRPTFSE 291
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +GEGA V + + AVAVK + V+C N + + L H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHENVVKF 69
Query: 349 QGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
G EGN L EY G L D+I I + + + + YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 408 ERQIIHRDVKACNILLDAEFNAKLGDFE-ATI------------PAGTMGYLAPEYV-YS 453
I HRD+K N+LLD N K+ DF AT+ GT+ Y+APE +
Sbjct: 123 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVD--NDGC 484
+E DV+S G+V + AG+ P D +D C
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 214
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 93/213 (43%), Gaps = 28/213 (13%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +GEGA V + + AVAVK + V+C N + + L H+N+V+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHENVVKF 70
Query: 349 QGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
G EGN L EY G L D+I I + + + + YLH
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 408 ERQIIHRDVKACNILLDAEFNAKLGDFE-ATI------------PAGTMGYLAPEYV-YS 453
I HRD+K N+LLD N K+ DF AT+ GT+ Y+APE +
Sbjct: 124 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDN--DGC 484
+E DV+S G+V + AG+ P D D C
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 215
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 93/213 (43%), Gaps = 28/213 (13%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +GEGA V + + AVAVK + V+C N + + L H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHENVVKF 69
Query: 349 QGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
G EGN L EY G L D+I I + + + + YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 408 ERQIIHRDVKACNILLDAEFNAKLGDFE-ATI------------PAGTMGYLAPEYV-YS 453
I HRD+K N+LLD N K+ DF AT+ GT+ Y+APE +
Sbjct: 123 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDN--DGC 484
+E DV+S G+V + AG+ P D D C
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 214
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +GEGA V + + AVAVK + V+C N + + L H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHENVVKF 69
Query: 349 QGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
G EGN L EY G L D+I I + + + + YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 408 ERQIIHRDVKACNILLDAEFNAKLGDFE-ATI------------PAGTMGYLAPEYV-YS 453
I HRD+K N+LLD N K+ DF AT+ GT+ Y+APE +
Sbjct: 123 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVD--NDGC 484
+E DV+S G+V + AG+ P D +D C
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 214
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +GEGA V + + AVAVK + V+C N + + L H+N+V+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHENVVKF 70
Query: 349 QGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
G EGN L EY G L D+I I + + + + YLH
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 408 ERQIIHRDVKACNILLDAEFNAKLGDFE-ATI------------PAGTMGYLAPEYV-YS 453
I HRD+K N+LLD N K+ DF AT+ GT+ Y+APE +
Sbjct: 124 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVD--NDGC 484
+E DV+S G+V + AG+ P D +D C
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 215
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 105/260 (40%), Gaps = 48/260 (18%)
Query: 310 AVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCE-GNELVLVYEYLPNG 368
VAVK K +E + H N+V L G C + G L+++ E+ G
Sbjct: 50 TVAVKML-KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 369 SLDKILHNNSSSSI------------VLSWEKRLNIVLGVASALSYLHEECERQIIHRDV 416
+L L + + + L+ E + VA + +L R+ IHRD+
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 165
Query: 417 KACNILLDAEFNAKLGDF----------------EATIPAGTMGYLAPEYVYSGVPSEKT 460
A NILL + K+ DF +A +P + ++APE ++ V + ++
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP---LKWMAPETIFDRVYTIQS 222
Query: 461 DVYSFGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERM 519
DV+SFGV+ E+ + G SP G I + K+G + A D+ M
Sbjct: 223 DVWSFGVLLWEIFSLGASPY--PGVKIDEEFCRRLKEGTRMRAPDY---------TTPEM 271
Query: 520 LMVGLSCVHPNHEKRPSVKE 539
L C H +RP+ E
Sbjct: 272 YQTMLDCWHGEPSQRPTFSE 291
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +GEGA V + + AVAVK + V+C N + + L H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHENVVKF 69
Query: 349 QGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
G EGN L EY G L D+I I + + + + YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 408 ERQIIHRDVKACNILLDAEFNAKLGDFE-ATI------------PAGTMGYLAPEYV-YS 453
I HRD+K N+LLD N K+ DF AT+ GT+ Y+APE +
Sbjct: 123 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVD--NDGC 484
+E DV+S G+V + AG+ P D +D C
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 214
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 27/203 (13%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G VY+G + K + +E F E A M ++H NLVQL G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKE-IKHPNLVQLLGV 82
Query: 352 CCEGNELVLVYEYLPNGSLDKIL---HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
C ++ E++ G+L L + +++VL L + ++SA+ YL +
Sbjct: 83 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---K 134
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVP 456
+ IHRD+ A N L+ K+ DF T AG + + APE +
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 194
Query: 457 SEKTDVYSFGVVALEVAA-GKSP 478
S K+DV++FGV+ E+A G SP
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSP 217
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 285 GFNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
F K +GEG VYK + +G VA+K+ E + E + + L H
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHP 66
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
N+V+L N+L LV+E+L + L K + ++ + I L K + + + L++
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 123
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVY 452
H +++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 124 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 180
Query: 453 S-GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 214
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 106/265 (40%), Gaps = 48/265 (18%)
Query: 310 AVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCE-GNELVLVYEYLPNG 368
VAVK K +E + H N+V L G C + G L+++ E+ G
Sbjct: 50 TVAVKML-KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 369 SLDKILHNNSSSSI------------VLSWEKRLNIVLGVASALSYLHEECERQIIHRDV 416
+L L + + + L+ E + VA + +L R+ IHRD+
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 165
Query: 417 KACNILLDAEFNAKLGDF----------------EATIPAGTMGYLAPEYVYSGVPSEKT 460
A NILL + K+ DF +A +P + ++APE ++ V + ++
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP---LKWMAPETIFDRVYTIQS 222
Query: 461 DVYSFGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERM 519
DV+SFGV+ E+ + G SP G I + K+G + A D+ M
Sbjct: 223 DVWSFGVLLWEIFSLGASPY--PGVKIDEEFCRRLKEGTRMRAPDY---------TTPEM 271
Query: 520 LMVGLSCVHPNHEKRPSVKEAARIL 544
L C H +RP+ E L
Sbjct: 272 YQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 285 GFNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
F K +GEG VYK + +G VA+K+ E + E + + L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHP 62
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
N+V+L N+L LV+E+L + L K + ++ + I L K + + + L++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVY 452
H +++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 453 -SGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+G V+ G+ VA+K KP + + F E M LRH+ LVQL
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTM--SPEAFLQEAQVMKK-LRHEKLVQLYAV 81
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
E + +V EY+ G L L + L + +++ +AS ++Y+
Sbjct: 82 VSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVER---MNY 135
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
+HRD++A NIL+ K+ DF E T G + + APE G + K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 460 TDVYSFGVVALEVAA-GKSP 478
+DV+SFG++ E+ G+ P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +GEGA V + + AVAVK + V+C N + + L H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHENVVKF 69
Query: 349 QGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
G EGN L EY G L D+I I + + + + YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 408 ERQIIHRDVKACNILLDAEFNAKLGDFE-ATI------------PAGTMGYLAPEYV-YS 453
I HRD+K N+LLD N K+ DF AT+ GT+ Y+APE +
Sbjct: 123 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVD--NDGC 484
+E DV+S G+V + AG+ P D +D C
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 214
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 141/339 (41%), Gaps = 56/339 (16%)
Query: 244 IISCFLIKKKRHDGRSKEDHVCTVQRVPMRLALTDI------KQATLGFNKNRIVGEGAS 297
+I ++ +KR++ R + V P + D+ + A +R +G+G+
Sbjct: 2 VIMLYVFHRKRNNSRLG-NGVLYASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSF 60
Query: 298 ATVYKGSLPSGGAVAVKRFEKPNRV------ECARNPFTTEFATMAGCLRHKN---LVQL 348
VY+G A V + E RV E A EF A ++ N +V+L
Sbjct: 61 GMVYEGV-----AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL 115
Query: 349 QGWCCEGNELVLVYEYLPNGSLDKILHN---NSSSSIVL---SWEKRLNIVLGVASALSY 402
G +G +++ E + G L L + ++ VL S K + + +A ++Y
Sbjct: 116 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 175
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT--------IPAGTMG-----YLAPE 449
L+ + +HRD+ A N ++ +F K+GDF T G G +++PE
Sbjct: 176 LNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 232
Query: 450 YVYSGVPSEKTDVYSFGVVALEVAA-GKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLR 508
+ GV + +DV+SFGVV E+A + P + + V +G LLD D
Sbjct: 233 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSNEQVLRFVMEGGLLDKPDNCPD 289
Query: 509 GKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILKGE 547
F E+ RM C N + RPS E +K E
Sbjct: 290 MLF---ELMRM------CWQYNPKMRPSFLEIISSIKEE 319
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 26/213 (12%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +GEG+ V +G VA+K K + + LRH ++++L
Sbjct: 10 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 69
Query: 349 QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
+E+++V EY N D I+ + +S ++ + SA+ Y H
Sbjct: 70 YDVIKSKDEIIMVIEYAGNELFDYIVQRDK-----MSEQEARRFFQQIISAVEYCHRH-- 122
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDFEAT----------IPAGTMGYLAPEYV----YSG 454
+I+HRD+K N+LLD N K+ DF + G+ Y APE + Y+G
Sbjct: 123 -KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 181
Query: 455 VPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
+ DV+S GV+ + + P D++ ++
Sbjct: 182 ---PEVDVWSCGVILYVMLCRRLPFDDESIPVL 211
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 27/203 (13%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G VY+G + K + +E F E A M ++H NLVQL G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKE-IKHPNLVQLLGV 82
Query: 352 CCEGNELVLVYEYLPNGSLDKIL---HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
C ++ E++ G+L L + +++VL L + ++SA+ YL +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---K 134
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVP 456
+ IHRD+ A N L+ K+ DF T AG + + APE +
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 194
Query: 457 SEKTDVYSFGVVALEVAA-GKSP 478
S K+DV++FGV+ E+A G SP
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSP 217
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 121/288 (42%), Gaps = 49/288 (17%)
Query: 289 NRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRV------ECARNPFTTEFATMAGCLRH 342
+R +G+G+ VY+G A V + E RV E A EF A ++
Sbjct: 30 SRELGQGSFGMVYEGV-----AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 84
Query: 343 KN---LVQLQGWCCEGNELVLVYEYLPNGSLDKILHN------NSSSSIVLSWEKRLNIV 393
N +V+L G +G +++ E + G L L + N+ S K + +
Sbjct: 85 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 144
Query: 394 LGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT--------IPAGTMG- 444
+A ++YL+ + +HRD+ A N ++ +F K+GDF T G G
Sbjct: 145 GEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 201
Query: 445 ----YLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVDNDGCVIVDWVWNLRKKGKL 499
+++PE + GV + +DV+SFGVV E+A + P + + V +G L
Sbjct: 202 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSNEQVLRFVMEGGL 258
Query: 500 LDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILKGE 547
LD D F E+ RM C N + RPS E +K E
Sbjct: 259 LDKPDNCPDMLF---ELMRM------CWQYNPKMRPSFLEIISSIKEE 297
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F K +GEG VYK + +G VA+K+ E + E + + L H N
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHPN 70
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+V+L N+L LV+E+L + L K + ++ + I L K + + + L++ H
Sbjct: 71 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 127
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVYS 453
+++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 128 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 184
Query: 454 -GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 185 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 217
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +GEGA V + + AVAVK + V+C N + + L H+N+V+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHENVVKF 70
Query: 349 QGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
G EGN L EY G L D+I I + + + + YLH
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 408 ERQIIHRDVKACNILLDAEFNAKLGDFE-ATI------------PAGTMGYLAPEYV-YS 453
I HRD+K N+LLD N K+ DF AT+ GT+ Y+APE +
Sbjct: 124 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVD--NDGC 484
+E DV+S G+V + AG+ P D +D C
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 215
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +GEGA V + + AVAVK + V+C N + + L H+N+V+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHENVVKF 70
Query: 349 QGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
G EGN L EY G L D+I I + + + + YLH
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 408 ERQIIHRDVKACNILLDAEFNAKLGDFE-ATI------------PAGTMGYLAPEYV-YS 453
I HRD+K N+LLD N K+ DF AT+ GT+ Y+APE +
Sbjct: 124 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVD--NDGC 484
+E DV+S G+V + AG+ P D +D C
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 215
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +GEGA V + + AVAVK + V+C N + + L H+N+V+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHENVVKF 70
Query: 349 QGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
G EGN L EY G L D+I I + + + + YLH
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 408 ERQIIHRDVKACNILLDAEFNAKLGDFE-ATI------------PAGTMGYLAPEYV-YS 453
I HRD+K N+LLD N K+ DF AT+ GT+ Y+APE +
Sbjct: 124 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVD--NDGC 484
+E DV+S G+V + AG+ P D +D C
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 215
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 27/203 (13%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G VY+G + K + +E F E A M ++H NLVQL G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKE-IKHPNLVQLLGV 77
Query: 352 CCEGNELVLVYEYLPNGSLDKIL---HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
C ++ E++ G+L L + +++VL L + ++SA+ YL +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---K 129
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVP 456
+ IHRD+ A N L+ K+ DF T AG + + APE +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 457 SEKTDVYSFGVVALEVAA-GKSP 478
S K+DV++FGV+ E+A G SP
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 285 GFNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
F K +GEG VYK + +G VA+K+ E + E + + L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHP 62
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
N+V+L N+L LV+E+L + L K + ++ + I L K + + + L++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVY 452
H +++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 453 S-GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 27/203 (13%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G VY+G + K + +E F E A M ++H NLVQL G
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKE-IKHPNLVQLLGV 90
Query: 352 CCEGNELVLVYEYLPNGSLDKIL---HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
C ++ E++ G+L L + +++VL L + ++SA+ YL +
Sbjct: 91 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---K 142
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVP 456
+ IHRD+ A N L+ K+ DF T AG + + APE +
Sbjct: 143 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 202
Query: 457 SEKTDVYSFGVVALEVAA-GKSP 478
S K+DV++FGV+ E+A G SP
Sbjct: 203 SIKSDVWAFGVLLWEIATYGMSP 225
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 285 GFNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
F K +GEG VYK + +G VA+K+ E + E + + L H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHP 61
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
N+V+L N+L LV+E+L + L K + ++ + I L K + + + L++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVY 452
H +++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 453 S-GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 121/288 (42%), Gaps = 49/288 (17%)
Query: 289 NRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRV------ECARNPFTTEFATMAGCLRH 342
+R +G+G+ VY+G A V + E RV E A EF A ++
Sbjct: 30 SRELGQGSFGMVYEGV-----AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 84
Query: 343 KN---LVQLQGWCCEGNELVLVYEYLPNGSLDKILHN------NSSSSIVLSWEKRLNIV 393
N +V+L G +G +++ E + G L L + N+ S K + +
Sbjct: 85 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 144
Query: 394 LGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT--------IPAGTMG- 444
+A ++YL+ + +HRD+ A N ++ +F K+GDF T G G
Sbjct: 145 GEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 201
Query: 445 ----YLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVDNDGCVIVDWVWNLRKKGKL 499
+++PE + GV + +DV+SFGVV E+A + P + + V +G L
Sbjct: 202 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSNEQVLRFVMEGGL 258
Query: 500 LDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILKGE 547
LD D F E+ RM C N + RPS E +K E
Sbjct: 259 LDKPDNCPDMLF---ELMRM------CWQYNPKMRPSFLEIISSIKEE 297
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 285 GFNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
F K +GEG VYK + +G VA+K+ E + E + + L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHP 62
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
N+V+L N+L LV+E+L + L K + ++ + I L K + + + L++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVY 452
H +++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 453 S-GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 93/213 (43%), Gaps = 28/213 (13%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +GEGA V + + AVAVK + V+C N + + L H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHENVVKF 69
Query: 349 QGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
G EGN L EY G L D+I I + + + + YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 408 ERQIIHRDVKACNILLDAEFNAKLGDFE-ATI------------PAGTMGYLAPEYV-YS 453
I HRD+K N+LLD N K+ DF AT+ GT+ Y+APE +
Sbjct: 123 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDN--DGC 484
+E DV+S G+V + AG+ P D D C
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 214
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 121/288 (42%), Gaps = 49/288 (17%)
Query: 289 NRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRV------ECARNPFTTEFATMAGCLRH 342
+R +G+G+ VY+G A V + E RV E A EF A ++
Sbjct: 20 SRELGQGSFGMVYEGV-----AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 74
Query: 343 KN---LVQLQGWCCEGNELVLVYEYLPNGSLDKILHN------NSSSSIVLSWEKRLNIV 393
N +V+L G +G +++ E + G L L + N+ S K + +
Sbjct: 75 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 134
Query: 394 LGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT--------IPAGTMG- 444
+A ++YL+ + +HRD+ A N ++ +F K+GDF T G G
Sbjct: 135 GEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 191
Query: 445 ----YLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVDNDGCVIVDWVWNLRKKGKL 499
+++PE + GV + +DV+SFGVV E+A + P + + V +G L
Sbjct: 192 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSNEQVLRFVMEGGL 248
Query: 500 LDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILKGE 547
LD D F E+ RM C N + RPS E +K E
Sbjct: 249 LDKPDNCPDMLF---ELMRM------CWQYNPKMRPSFLEIISSIKEE 287
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F K +GEG VYK + +G VA+K+ E + E + + L H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHPN 63
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+V+L N+L LV+E+L + L K + ++ + I L K + + + L++ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 120
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVYS 453
+++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 454 -GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 123/288 (42%), Gaps = 49/288 (17%)
Query: 289 NRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRV------ECARNPFTTEFATMAGCLRH 342
+R +G+G+ VY+G A V + E RV E A EF A ++
Sbjct: 17 SRELGQGSFGMVYEGV-----AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 71
Query: 343 KN---LVQLQGWCCEGNELVLVYEYLPNGSLDKILHN---NSSSSIVL---SWEKRLNIV 393
N +V+L G +G +++ E + G L L + ++ VL S K + +
Sbjct: 72 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 131
Query: 394 LGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT--------IPAGTMG- 444
+A ++YL+ + +HRD+ A N ++ +F K+GDF T G G
Sbjct: 132 GEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 188
Query: 445 ----YLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVDNDGCVIVDWVWNLRKKGKL 499
+++PE + GV + +DV+SFGVV E+A + P + + V +G L
Sbjct: 189 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSNEQVLRFVMEGGL 245
Query: 500 LDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILKGE 547
LD D F E+ RM C N + RPS E +K E
Sbjct: 246 LDKPDNCPDMLF---ELMRM------CWQYNPKMRPSFLEIISSIKEE 284
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 285 GFNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
F K +GEG VYK + +G VA+K+ E + E + + L H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHP 61
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
N+V+L N+L LV+E+L + L K + ++ + I L K + + + L++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVY 452
H +++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 453 S-GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 26/213 (12%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +GEG+ V +G VA+K K + + LRH ++++L
Sbjct: 20 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 79
Query: 349 QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
+E+++V EY N D I+ + +S ++ + SA+ Y H
Sbjct: 80 YDVIKSKDEIIMVIEYAGNELFDYIVQRDK-----MSEQEARRFFQQIISAVEYCHRH-- 132
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDFEAT----------IPAGTMGYLAPEYV----YSG 454
+I+HRD+K N+LLD N K+ DF + G+ Y APE + Y+G
Sbjct: 133 -KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 191
Query: 455 VPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
+ DV+S GV+ + + P D++ ++
Sbjct: 192 ---PEVDVWSCGVILYVMLCRRLPFDDESIPVL 221
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 26/208 (12%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +GEG+ V +G VA+K K + + LRH ++++L
Sbjct: 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 78
Query: 349 QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
+E+++V EY N D I+ + +S ++ + SA+ Y H
Sbjct: 79 YDVIKSKDEIIMVIEYAGNELFDYIVQRDK-----MSEQEARRFFQQIISAVEYCHRH-- 131
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDFEAT----------IPAGTMGYLAPEYV----YSG 454
+I+HRD+K N+LLD N K+ DF + G+ Y APE + Y+G
Sbjct: 132 -KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 190
Query: 455 VPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ DV+S GV+ + + P D++
Sbjct: 191 ---PEVDVWSCGVILYVMLCRRLPFDDE 215
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F K +GEG VYK + +G VA+K+ E + E + + L H N
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHPN 70
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+V+L N+L LV+E+L + L K + ++ + I L K + + + L++ H
Sbjct: 71 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 127
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVY- 452
+++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 128 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 184
Query: 453 SGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 185 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 217
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 285 GFNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
F K +GEG VYK + +G VA+K+ E + E + + L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHP 62
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
N+V+L N+L LV+E+L + L K + ++ + I L K + + + L++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVY 452
H +++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 453 S-GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F K +GEG VYK + +G VA+K+ E + E + + L H N
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHPN 64
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+V+L N+L LV+E+L + L K + ++ + I L K + + + L++ H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 121
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVYS 453
+++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 454 -GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 123/288 (42%), Gaps = 49/288 (17%)
Query: 289 NRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRV------ECARNPFTTEFATMAGCLRH 342
+R +G+G+ VY+G A V + E RV E A EF A ++
Sbjct: 23 SRELGQGSFGMVYEGV-----AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 77
Query: 343 KN---LVQLQGWCCEGNELVLVYEYLPNGSLDKILHN---NSSSSIVL---SWEKRLNIV 393
N +V+L G +G +++ E + G L L + ++ VL S K + +
Sbjct: 78 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 137
Query: 394 LGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT--------IPAGTMG- 444
+A ++YL+ + +HRD+ A N ++ +F K+GDF T G G
Sbjct: 138 GEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 194
Query: 445 ----YLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVDNDGCVIVDWVWNLRKKGKL 499
+++PE + GV + +DV+SFGVV E+A + P + + V +G L
Sbjct: 195 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSNEQVLRFVMEGGL 251
Query: 500 LDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILKGE 547
LD D F E+ RM C N + RPS E +K E
Sbjct: 252 LDKPDNCPDMLF---ELMRM------CWQYNPKMRPSFLEIISSIKEE 290
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +G+G A V + +G VAVK +K + E M L H N+V+L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK-VLNHPNIVKL 78
Query: 349 QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
L LV EY G + L + + K IV SA+ Y H++
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCHQKF- 133
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF----EATIP------AGTMGYLAPEYVYSGVPSE 458
I+HRD+KA N+LLDA+ N K+ DF E T G Y APE ++ G +
Sbjct: 134 --IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPE-LFQGKKYD 190
Query: 459 --KTDVYSFGVVALEVAAGKSPVD 480
+ DV+S GV+ + +G P D
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 20/210 (9%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F K +GEG VYK + +G VA+K+ E + E + + L H N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHPN 66
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+V+L N+L LV+E+L + L K + ++ + I L K + + + L++ H
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 123
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVYS 453
+++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 454 -GVPSEKTDVYSFGVVALEVAAGKSPVDND 482
S D++S G + E+ ++ D
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 27/203 (13%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G VY+G + K + +E F E A M ++H NLVQL G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKE-IKHPNLVQLLGV 79
Query: 352 CCEGNELVLVYEYLPNGSLDKIL---HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
C ++ E++ G+L L + +++VL L + ++SA+ YL +
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---K 131
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVP 456
+ IHRD+ A N L+ K+ DF T AG + + APE +
Sbjct: 132 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 191
Query: 457 SEKTDVYSFGVVALEVAA-GKSP 478
S K+DV++FGV+ E+A G SP
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSP 214
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F K +GEG VYK + +G VA+K+ E + E + + L H N
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHPN 65
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+V+L N+L LV+E+L + L K + ++ + I L K + + + L++ H
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 122
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVYS 453
+++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 123 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
Query: 454 -GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 212
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 285 GFNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
F K +GEG VYK + +G VA+K+ E + E + + L H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHP 61
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
N+V+L N+L LV+E+L + L K + ++ + I L K + + + L++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVY 452
H +++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 453 S-GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 20/210 (9%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F K +GEG VYK + +G VA+K+ E + E + + L H N
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHPN 67
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+V+L N+L LV+E+L + L K + ++ + I L K + + + L++ H
Sbjct: 68 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 124
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVYS 453
+++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 125 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 181
Query: 454 -GVPSEKTDVYSFGVVALEVAAGKSPVDND 482
S D++S G + E+ ++ D
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRALFPGD 211
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 285 GFNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
F K +GEG VYK + +G VA+K+ E + E + + L H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHP 61
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
N+V+L N+L LV+E+L + L K + ++ + I L K + + + L++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVY 452
H +++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 453 S-GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F K +GEG VYK + +G VA+K+ E + E + + L H N
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHPN 64
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+V+L N+L LV+E+L + L K + ++ + I L K + + + L++ H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 121
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVYS 453
+++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 454 -GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 27/203 (13%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G VY+G + K + +E F E A M ++H NLVQL G
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKE-IKHPNLVQLLGV 81
Query: 352 CCEGNELVLVYEYLPNGSLDKIL---HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
C ++ E++ G+L L + +++VL L + ++SA+ YL +
Sbjct: 82 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---K 133
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVP 456
+ IHRD+ A N L+ K+ DF T AG + + APE +
Sbjct: 134 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 193
Query: 457 SEKTDVYSFGVVALEVAA-GKSP 478
S K+DV++FGV+ E+A G SP
Sbjct: 194 SIKSDVWAFGVLLWEIATYGMSP 216
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 26/213 (12%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +GEG+ V +G VA+K K + + LRH ++++L
Sbjct: 14 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 73
Query: 349 QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
+E+++V EY N D I+ + +S ++ + SA+ Y H
Sbjct: 74 YDVIKSKDEIIMVIEYAGNELFDYIVQRDK-----MSEQEARRFFQQIISAVEYCHRH-- 126
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDFEAT----------IPAGTMGYLAPEYV----YSG 454
+I+HRD+K N+LLD N K+ DF + G+ Y APE + Y+G
Sbjct: 127 -KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 185
Query: 455 VPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
+ DV+S GV+ + + P D++ ++
Sbjct: 186 ---PEVDVWSCGVILYVMLCRRLPFDDESIPVL 215
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 285 GFNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
F K +GEG VYK + +G VA+K+ E + E + + L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHP 62
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
N+V+L N+L LV+E+L + L K + ++ + I L K + + + L++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVY 452
H +++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 453 S-GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F K +GEG VYK + +G VA+K+ E + E + + L H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHPN 63
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+V+L N+L LV+E+L + L K + ++ + I L K + + + L++ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 120
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVYS 453
+++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 454 -GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 27/203 (13%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G VY+G + K + +E F E A M ++H NLVQL G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKE-IKHPNLVQLLGV 79
Query: 352 CCEGNELVLVYEYLPNGSLDKIL---HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
C ++ E++ G+L L + +++VL L + ++SA+ YL +
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---K 131
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVP 456
+ IHRD+ A N L+ K+ DF T AG + + APE +
Sbjct: 132 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 191
Query: 457 SEKTDVYSFGVVALEVAA-GKSP 478
S K+DV++FGV+ E+A G SP
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSP 214
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 44/231 (19%)
Query: 276 LTDIKQATLGFNKNRIVGEGASATVYKGSL--PSGG----AVAVKRFEKPNRVECARNPF 329
L +I + + F + +GE VYKG L P+ G AVA+K + + A P
Sbjct: 3 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK-----DKAEGPL 55
Query: 330 TTEF---ATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSW 386
EF A + L+H N+V L G + L +++ Y +G L + L S S V S
Sbjct: 56 REEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGST 115
Query: 387 EKR------------LNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGD- 433
+ +++V +A+ + YL ++H+D+ N+L+ + N K+ D
Sbjct: 116 DDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDL 172
Query: 434 --FEATIPAG----------TMGYLAPEYVYSGVPSEKTDVYSFGVVALEV 472
F A + ++APE + G S +D++S+GVV EV
Sbjct: 173 GLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEV 223
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 44/231 (19%)
Query: 276 LTDIKQATLGFNKNRIVGEGASATVYKGSL--PSGG----AVAVKRFEKPNRVECARNPF 329
L +I + + F + +GE VYKG L P+ G AVA+K + + A P
Sbjct: 20 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK-----DKAEGPL 72
Query: 330 TTEF---ATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSW 386
EF A + L+H N+V L G + L +++ Y +G L + L S S V S
Sbjct: 73 REEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGST 132
Query: 387 EKR------------LNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGD- 433
+ +++V +A+ + YL ++H+D+ N+L+ + N K+ D
Sbjct: 133 DDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDL 189
Query: 434 --FEATIPAG----------TMGYLAPEYVYSGVPSEKTDVYSFGVVALEV 472
F A + ++APE + G S +D++S+GVV EV
Sbjct: 190 GLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEV 240
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F K +GEG VYK + +G VA+K+ E + E + + L H N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHPN 66
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+V+L N+L LV+E+L + L K + ++ + I L K + + + L++ H
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 123
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVYS 453
+++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 454 -GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F K +GEG VYK + +G VA+K+ E + E + + L H N
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHPN 65
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+V+L N+L LV+E+L + L K + ++ + I L K + + + L++ H
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 122
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVYS 453
+++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 123 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
Query: 454 -GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 212
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 27/203 (13%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G VY+G + K + +E F E A M ++H NLVQL G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKE-IKHPNLVQLLGV 77
Query: 352 CCEGNELVLVYEYLPNGSLDKIL---HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
C ++ E++ G+L L + +++VL L + ++SA+ YL +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---K 129
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVP 456
+ IHRD+ A N L+ K+ DF T AG + + APE +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 457 SEKTDVYSFGVVALEVAA-GKSP 478
S K+DV++FGV+ E+A G SP
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSP 212
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 35/221 (15%)
Query: 279 IKQATLGFNKNRIVGEGASATVYKGSLPSGG--------AVAVKRFEKPNRVECARNPFT 330
I+ L FN++ +G+G ++KG G V +K +K +R + + F
Sbjct: 5 IRNEDLIFNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHR-NYSESFF- 60
Query: 331 TEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRL 390
E A+M L HK+LV G C G+E +LV E++ GSLD L N + +L W +L
Sbjct: 61 -EAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINIL-W--KL 116
Query: 391 NIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGD---FEATIPAGTMGYLA 447
+ +A A+ +L E +IH +V A NILL E + K G+ + + P ++ L
Sbjct: 117 EVAKQLAWAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP 173
Query: 448 PEYVYSGVP-------------SEKTDVYSFGVVALEVAAG 475
+ + +P + TD +SFG E+ +G
Sbjct: 174 KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F K +GEG VYK + +G VA+K+ E + E + + L H N
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHPN 64
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+V+L N+L LV+E+L + L K + ++ + I L K + + + L++ H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 121
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVYS 453
+++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 178
Query: 454 -GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 123/288 (42%), Gaps = 49/288 (17%)
Query: 289 NRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRV------ECARNPFTTEFATMAGCLRH 342
+R +G+G+ VY+G A V + E RV E A EF A ++
Sbjct: 23 SRELGQGSFGMVYEGV-----AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 77
Query: 343 KN---LVQLQGWCCEGNELVLVYEYLPNGSLDKILHN---NSSSSIVL---SWEKRLNIV 393
N +V+L G +G +++ E + G L L + ++ VL S K + +
Sbjct: 78 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 137
Query: 394 LGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT--------IPAGTMG- 444
+A ++YL+ + +HRD+ A N ++ +F K+GDF T G G
Sbjct: 138 GEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 194
Query: 445 ----YLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVDNDGCVIVDWVWNLRKKGKL 499
+++PE + GV + +DV+SFGVV E+A + P + + V +G L
Sbjct: 195 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSNEQVLRFVMEGGL 251
Query: 500 LDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILKGE 547
LD D F E+ RM C N + RPS E +K E
Sbjct: 252 LDKPDNCPDMLF---ELMRM------CWQYNPKMRPSFLEIISSIKEE 290
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 27/203 (13%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G VY+G + K + +E F E A M ++H NLVQL G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKE-IKHPNLVQLLGV 82
Query: 352 CCEGNELVLVYEYLPNGSLDKIL---HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
C ++ E++ G+L L + +++VL L + ++SA+ YL +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---K 134
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVP 456
+ IHRD+ A N L+ K+ DF T AG + + APE +
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 194
Query: 457 SEKTDVYSFGVVALEVAA-GKSP 478
S K+DV++FGV+ E+A G SP
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSP 217
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 35/226 (15%)
Query: 281 QATLGFNKN----RIVGEGASATVYKG-SLPSGGAVAVKRFE-------KPNRVECARNP 328
+T GF +N I+G G S+ V + P+ AVK + V+ R
Sbjct: 10 HSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREA 69
Query: 329 FTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEK 388
E + H N++QL+ LV++ + G L L + + LS ++
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKE 125
Query: 389 RLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIP--------- 439
I+ + + LH+ I+HRD+K NILLD + N KL DF +
Sbjct: 126 TRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS 182
Query: 440 -AGTMGYLAPEYVYSGVPS------EKTDVYSFGVVALEVAAGKSP 478
GT YLAPE + + ++ D++S GV+ + AG P
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 91/204 (44%), Gaps = 22/204 (10%)
Query: 290 RIVGEGASATV-YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +G+G A V + +G VAV+ +K + E M L H N+V+L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMK-VLNHPNIVKL 78
Query: 349 QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
L LV EY G + L + + K IV SA+ Y H++
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCHQKF- 133
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF----EATIP------AGTMGYLAPEYVYSGVPSE 458
I+HRD+KA N+LLDA+ N K+ DF E T G+ Y APE ++ G +
Sbjct: 134 --IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPE-LFQGKKYD 190
Query: 459 --KTDVYSFGVVALEVAAGKSPVD 480
+ DV+S GV+ + +G P D
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 24/206 (11%)
Query: 289 NRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECA---RNPFTTEFATMAGCLRHKNL 345
NRI+GEG VY+G + + K + +C + F +E M L H ++
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN-LDHPHI 71
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
V+L G E ++ E P G L L N +S VL+ + L + A++YL
Sbjct: 72 VKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKAMAYLES 127
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF------------EATIPAGTMGYLAPEYVYS 453
+HRD+ NIL+ + KLGDF +A++ + +++PE +
Sbjct: 128 ---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 184
Query: 454 GVPSEKTDVYSFGVVALEVAA-GKSP 478
+ +DV+ F V E+ + GK P
Sbjct: 185 RRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 93/221 (42%), Gaps = 47/221 (21%)
Query: 292 VGEGASATVYK-GSLPSGGAVAVKRFEKP-NRVECAR-------------NPFTTEFATM 336
+G GA V K +PSG +AVKR N E R PFT F
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFY-- 116
Query: 337 AGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
G L + V W C EL+ + SLDK + + I + +
Sbjct: 117 -GALFREGDV----WIC--MELM-------DTSLDKFYKQVIDKGQTIPEDILGKIAVSI 162
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF----------EATIPAGTMGYL 446
AL +LH + +IHRDVK N+L++A K+ DF TI AG Y+
Sbjct: 163 VKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYM 220
Query: 447 APEYVYSGVP----SEKTDVYSFGVVALEVAAGKSPVDNDG 483
APE + + S K+D++S G+ +E+A + P D+ G
Sbjct: 221 APERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG 261
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 91/204 (44%), Gaps = 22/204 (10%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +G+G A V + +G VAV+ +K + E M L H N+V+L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMK-VLNHPNIVKL 78
Query: 349 QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
L LV EY G + L + + K IV SA+ Y H++
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCHQKF- 133
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF----EATIP------AGTMGYLAPEYVYSGVPSE 458
I+HRD+KA N+LLDA+ N K+ DF E T G+ Y APE ++ G +
Sbjct: 134 --IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE-LFQGKKYD 190
Query: 459 --KTDVYSFGVVALEVAAGKSPVD 480
+ DV+S GV+ + +G P D
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V+ G+ VA+K KP + + F E A + L+H LVQL
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTL-KPGTM--SPESFLEE-AQIMKKLKHDKLVQLYAV 72
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
E + +V EY+ GSL L + ++ L +++ VA+ ++Y+
Sbjct: 73 VSE-EPIYIVTEYMNKGSLLDFLKDGEGRALKLP--NLVDMAAQVAAGMAYIER---MNY 126
Query: 412 IHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVPSEK 459
IHRD+++ NIL+ K+ DF E T G + + APE G + K
Sbjct: 127 IHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 460 TDVYSFGVVALE-VAAGKSP 478
+DV+SFG++ E V G+ P
Sbjct: 187 SDVWSFGILLTELVTKGRVP 206
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 24/206 (11%)
Query: 289 NRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECA---RNPFTTEFATMAGCLRHKNL 345
NRI+GEG VY+G + + K + +C + F +E M L H ++
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN-LDHPHI 87
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
V+L G E ++ E P G L L N +S VL+ + L + A++YL
Sbjct: 88 VKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKAMAYLES 143
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF------------EATIPAGTMGYLAPEYVYS 453
+HRD+ NIL+ + KLGDF +A++ + +++PE +
Sbjct: 144 ---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 200
Query: 454 GVPSEKTDVYSFGVVALEVAA-GKSP 478
+ +DV+ F V E+ + GK P
Sbjct: 201 RRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 112/282 (39%), Gaps = 50/282 (17%)
Query: 292 VGEGASATVY--------KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
+GEGA V K VAVK K + E + +E M +HK
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHN------------NSSSSIVLSWEKRLN 391
N++ L G C + L ++ Y G+L + L N ++++ ++
Sbjct: 102 NIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 392 IVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGTMGY------ 445
+A + YL ++ IHRD+ A N+L+ K+ DF + Y
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 446 -------LAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKG 497
+APE ++ V + ++DV+SFGV+ E+ G SP + V+ ++ L K+G
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG---IPVEELFKLLKEG 275
Query: 498 KLLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKE 539
+D + M+ C H +RP+ K+
Sbjct: 276 HRMDKP---------ANCTNELYMMMRDCWHAVPSQRPTFKQ 308
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 35/226 (15%)
Query: 281 QATLGFNKN----RIVGEGASATVYKG-SLPSGGAVAVKRFE-------KPNRVECARNP 328
+T GF +N I+G G S+ V + P+ AVK + V+ R
Sbjct: 10 HSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREA 69
Query: 329 FTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEK 388
E + H N++QL+ LV++ + G L L + + LS ++
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKE 125
Query: 389 RLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIP--------- 439
I+ + + LH+ I+HRD+K NILLD + N KL DF +
Sbjct: 126 TRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE 182
Query: 440 -AGTMGYLAPEYVYSGVPS------EKTDVYSFGVVALEVAAGKSP 478
GT YLAPE + + ++ D++S GV+ + AG P
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F K +GEG VYK + +G VA+K+ E + E + + L H N
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHPN 64
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+V+L N+L LV+E+L + L K + ++ + I L K + + + L++ H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 121
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVYS 453
+++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 122 SH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 454 -GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 91/208 (43%), Gaps = 26/208 (12%)
Query: 290 RIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +GEGA V + + AVAVK + V+C N + + L H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHENVVKF 69
Query: 349 QGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
G EGN L EY G L D+I I + + + + YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 408 ERQIIHRDVKACNILLDAEFNAKLGDFE-ATI------------PAGTMGYLAPEYV-YS 453
I HRD+K N+LLD N K+ DF AT+ GT+ Y+APE +
Sbjct: 123 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDN 481
+E DV+S G+V + AG+ P D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F K +GEG VYK + +G VA+K+ E + E + + L H N
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHPN 65
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+V+L N+L LV+E+L + L K + ++ + I L K + + + L++ H
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 122
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVYS 453
+++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 123 SH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
Query: 454 -GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 212
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 87/203 (42%), Gaps = 20/203 (9%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+G GA +V K PSG +AVKR + E + + + +VQ G
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRI-RSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 351 WCCEGNELVLVYEYLPNGSLDKIL-HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECER 409
+ + E L + S DK + S V+ E I L AL++L E
Sbjct: 89 ALFREGDCWICME-LMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL-- 145
Query: 410 QIIHRDVKACNILLDAEFNAKLGDF----------EATIPAGTMGYLAPEYVYSGVPSE- 458
+IIHRD+K NILLD N KL DF T AG Y+APE + +
Sbjct: 146 KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQG 205
Query: 459 ---KTDVYSFGVVALEVAAGKSP 478
++DV+S G+ E+A G+ P
Sbjct: 206 YDVRSDVWSLGITLYELATGRFP 228
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 24/206 (11%)
Query: 289 NRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECA---RNPFTTEFATMAGCLRHKNL 345
NRI+GEG VY+G + + K + +C + F +E M L H ++
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN-LDHPHI 75
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
V+L G E ++ E P G L L N +S VL+ + L + A++YL
Sbjct: 76 VKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKAMAYLES 131
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF------------EATIPAGTMGYLAPEYVYS 453
+HRD+ NIL+ + KLGDF +A++ + +++PE +
Sbjct: 132 ---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 188
Query: 454 GVPSEKTDVYSFGVVALEVAA-GKSP 478
+ +DV+ F V E+ + GK P
Sbjct: 189 RRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 43/223 (19%)
Query: 291 IVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+ G V+K L + VAVK F ++ + +N + E ++ G ++H+N++Q G
Sbjct: 31 VKARGRFGCVWKAQLLNE-YVAVKIFPIQDK-QSWQNEY--EVYSLPG-MKHENILQFIG 85
Query: 351 WCCEGN----ELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEE 406
G +L L+ + GSL L N V+SW + +I +A L+YLHE+
Sbjct: 86 AEKRGTSVDVDLWLITAFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLAYLHED 140
Query: 407 C-------ERQIIHRDVKACNILLDAEFNAKLGDFEATI-------------PAGTMGYL 446
+ I HRD+K+ N+LL A + DF + GT Y+
Sbjct: 141 IPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYM 200
Query: 447 APEYVYSGVPSE-----KTDVYSFGVVALEVA----AGKSPVD 480
APE + + + + D+Y+ G+V E+A A PVD
Sbjct: 201 APEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVD 243
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 106/261 (40%), Gaps = 42/261 (16%)
Query: 310 AVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGS 369
VAVK K + E + +E M +HKN++ L G C + L ++ Y G+
Sbjct: 69 TVAVKML-KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGN 127
Query: 370 LDKILHN------------NSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVK 417
L + L N ++++ ++ +A + YL ++ IHRD+
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLA 184
Query: 418 ACNILLDAEFNAKLGDFEATIPAGTMGY-------------LAPEYVYSGVPSEKTDVYS 464
A N+L+ K+ DF + Y +APE ++ V + ++DV+S
Sbjct: 185 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 465 FGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLMVG 523
FGV+ E+ G SP + V+ ++ L K+G +D + M+
Sbjct: 245 FGVLMWEIFTLGGSPYPG---IPVEELFKLLKEGHRMDKP---------ANCTNELYMMM 292
Query: 524 LSCVHPNHEKRPSVKEAARIL 544
C H +RP+ K+ L
Sbjct: 293 RDCWHAVPSQRPTFKQLVEDL 313
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 28/208 (13%)
Query: 290 RIVGE-GASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
I+GE G VYK +A + + E + E +A C H N+V+L
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKV-IDTKSEEELEDYMVEIDILASC-DHPNIVKL 72
Query: 349 QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVL-GVASALSYLHEEC 407
N L ++ E+ G++D ++ E ++ +V AL+YLH+
Sbjct: 73 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLT----ESQIQVVCKQTLDALNYLHD-- 126
Query: 408 ERQIIHRDVKACNILLDAEFNAKLGDFEATIP------------AGTMGYLAPEYVYSGV 455
+IIHRD+KA NIL + + KL DF + GT ++APE V
Sbjct: 127 -NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCET 185
Query: 456 PSE-----KTDVYSFGVVALEVAAGKSP 478
+ K DV+S G+ +E+A + P
Sbjct: 186 SKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F K +GEG VYK + +G VA+K+ E + E + + L H N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHPN 66
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+V+L N+L LV+E+L + L K + ++ + I L K + + + L++ H
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 123
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVYS 453
+++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 124 SH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 454 -GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 20/210 (9%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F K +GEG VYK + +G VA+K+ E + E + + L H N
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHPN 64
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+V+L N+L LV+E+L + L K + ++ + I L K + + + L++ H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 121
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVYS 453
+++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 122 SH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 454 -GVPSEKTDVYSFGVVALEVAAGKSPVDND 482
S D++S G + E+ ++ D
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 94/212 (44%), Gaps = 36/212 (16%)
Query: 290 RIVGEGASATVYKGSL-PSGGAVAVKRFEKP-----NRVECARNPFTTEFATMAGCLRHK 343
R++G+G+ V + +G AVK +K + VEC TE ++ H
Sbjct: 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECT----MTEKRILSLARNHP 84
Query: 344 NLVQLQGWCC--EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLG-VASAL 400
L QL +CC + L V E++ G L + H S E R + SAL
Sbjct: 85 FLTQL--FCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFD---EARARFYAAEIISAL 137
Query: 401 SYLHEECERQIIHRDVKACNILLDAEFNAKLGDF------------EATIPAGTMGYLAP 448
+LH+ + II+RD+K N+LLD E + KL DF AT GT Y+AP
Sbjct: 138 MFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATF-CGTPDYIAP 193
Query: 449 EYVYSGVPSEKTDVYSFGVVALEVAAGKSPVD 480
E + + D ++ GV+ E+ G +P +
Sbjct: 194 EILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFTTEFATMAGCLRH 342
F K +++G GA TVYKG +P G V + K R + N + A + + +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 78 PHVCRLLGICLTST-VQLIMQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKG 130
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 131 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 115/266 (43%), Gaps = 43/266 (16%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G VY+G + K + +E F E A M ++H NLVQL G
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKE-IKHPNLVQLLGV 284
Query: 352 CCEGNELVLVYEYLPNGSLDKIL---HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
C ++ E++ G+L L + S++VL L + ++SA+ YL +
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLE---K 336
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVP 456
+ IHR++ A N L+ K+ DF T AG + + APE +
Sbjct: 337 KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 396
Query: 457 SEKTDVYSFGVVALEVAA-GKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKE 515
S K+DV++FGV+ E+A G SP + + V+ L +K D+R+ R E
Sbjct: 397 SIKSDVWAFGVLLWEIATYGMSPYPG---IDLSQVYELLEK-------DYRME----RPE 442
Query: 516 --MERMLMVGLSCVHPNHEKRPSVKE 539
E++ + +C N RPS E
Sbjct: 443 GCPEKVYELMRACWQWNPSDRPSFAE 468
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 274 LALTDIKQATLGFNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFT 330
+AL I + T F K +++G GA TVYKG +P G V + K R + N
Sbjct: 3 MALLRILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 61
Query: 331 TEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWE 387
+ A + + + ++ +L G C + L+ + +P G L + +N S +L+W
Sbjct: 62 LDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW- 119
Query: 388 KRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT----- 442
+ +A ++YL + R+++HRD+ A N+L+ + K+ DF G
Sbjct: 120 -----CVQIAEGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 171
Query: 443 --------MGYLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
+ ++A E + + + ++DV+S+GV E+ G P D
Sbjct: 172 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 123/288 (42%), Gaps = 49/288 (17%)
Query: 289 NRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRV------ECARNPFTTEFATMAGCLRH 342
+R +G+G+ VY+G A V + E RV E A EF A ++
Sbjct: 17 SRELGQGSFGMVYEGV-----AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 71
Query: 343 KN---LVQLQGWCCEGNELVLVYEYLPNGSLDKILHN---NSSSSIVL---SWEKRLNIV 393
N +V+L G +G +++ E + G L L + ++ VL S K + +
Sbjct: 72 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 131
Query: 394 LGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT--------IPAGTMG- 444
+A ++YL+ + +HRD+ A N + +F K+GDF T G G
Sbjct: 132 GEIADGMAYLNA---NKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 188
Query: 445 ----YLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVDNDGCVIVDWVWNLRKKGKL 499
+++PE + GV + +DV+SFGVV E+A + P + + V +G L
Sbjct: 189 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSNEQVLRFVMEGGL 245
Query: 500 LDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILKGE 547
LD D N +M +L + C N + RPS E +K E
Sbjct: 246 LDKPD-------NCPDM--LLELMRMCWQYNPKMRPSFLEIISSIKEE 284
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFTTEFATMAGCLRH 342
F K +++G GA TVYKG +P G V + K R + N + A + + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 80 PHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 133 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 48/227 (21%)
Query: 291 IVGEGASATVYKGSLPSGGAVAVKRF--EKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
I G V+K L VAVK F + + R F+T ++H+NL+Q
Sbjct: 22 IKARGRFGCVWKAQL-MNDFVAVKIFPLQDKQSWQSEREIFSTP------GMKHENLLQF 74
Query: 349 QGWCCEGN----ELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
G+ EL L+ + GSL L N +++W + ++ ++ LSYLH
Sbjct: 75 IAAEKRGSNLEVELWLITAFHDKGSLTDYLKGN-----IITWNELCHVAETMSRGLSYLH 129
Query: 405 EE---CERQ-----IIHRDVKACNILLDAEFNAKLGDFEATI-------------PAGTM 443
E+ C + I HRD K+ N+LL ++ A L DF + GT
Sbjct: 130 EDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTR 189
Query: 444 GYLAPEYVYSGVPSE-----KTDVYSFGVVALEVA----AGKSPVDN 481
Y+APE + + + + D+Y+ G+V E+ A PVD
Sbjct: 190 RYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDE 236
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 21/207 (10%)
Query: 286 FNKNRIVGEGASATVY---KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRH 342
F +++G+G+ V+ K + P G + + K ++ T + + H
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
+V+L +L L+ ++L G L L S ++ + E + +A L +
Sbjct: 90 PFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEEDVKFYLAELALGLDH 145
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA-----------GTMGYLAPEYV 451
LH II+RD+K NILLD E + KL DF + A GT+ Y+APE V
Sbjct: 146 LHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVV 202
Query: 452 YSGVPSEKTDVYSFGVVALEVAAGKSP 478
S D +S+GV+ E+ G P
Sbjct: 203 NRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFTTEFATMAGCLRH 342
F K +++G GA TVYKG +P G V + K R + N + A + + +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 81 PHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 133
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 134 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFTTEFATMAGCLRH 342
F K +++G GA TVYKG +P G V + K R + N + A + + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 77 PHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFTTEFATMAGCLRH 342
F K +++G GA TVYKG +P G V + K R + N + A + + +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 81 PHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 133
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 134 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFTTEFATMAGCLRH 342
F K +++G GA TVYKG +P G V + K R + N + A + + +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 78 PHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 130
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 131 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFTTEFATMAGCLRH 342
F K +++G GA TVYKG +P G V + K R + N + A + + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 77 PHVCRLLGICLTST-VQLITQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFTTEFATMAGCLRH 342
F K +++G GA TVYKG +P G V + K R + N + A + + +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 71 PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 123
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 124 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 180
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 181 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFTTEFATMAGCLRH 342
F K +++G GA TVYKG +P G V + K R + N + A + + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 79 PHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 132 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFTTEFATMAGCLRH 342
F K +++G GA TVYKG +P G V + K R + N + A + + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 79 PHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 132 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFTTEFATMAGCLRH 342
F K +++G GA TVYKG +P G V + K R + N + A + + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 79 PHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 132 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFTTEFATMAGCLRH 342
F K +++G GA TVYKG +P G V + K R + N + A + + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 80 PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 133 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFTTEFATMAGCLRH 342
F K +++G GA TVYKG +P G V + K R + N + A + + +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 87 PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 139
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 140 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 196
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 197 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFTTEFATMAGCLRH 342
F K +++G GA TVYKG +P G V + K R + N + A + + +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 102 PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 154
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 155 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 211
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 212 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFTTEFATMAGCLRH 342
F K +++G GA TVYKG +P G V + K R + N + A + + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 80 PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 133 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFTTEFATMAGCLRH 342
F K +++G GA TVYKG +P G V + K R + N + A + + +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 84 PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 137 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F K +GEG VYK + +G VA+K+ E + E + + L H N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHPN 66
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+V+L N+L LV+E++ + L K + ++ + I L K + + + L++ H
Sbjct: 67 IVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 123
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVYS 453
+++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 454 -GVPSEKTDVYSFGVVALEVAAGKS 477
S D++S G + E+ ++
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFTTEFATMAGCLRH 342
F K +++G GA TVYKG +P G V + K R + N + A + + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 77 PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFTTEFATMAGCLRH 342
F K +++G GA TVYKG +P G V + K R + N + A + + +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 84 PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 137 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFTTEFATMAGCLRH 342
F K +++G GA TVYKG +P G V + K R + N + A + + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 80 PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 133 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFTTEFATMAGCLRH 342
F K +++G GA TVYKG +P G V + K R + N + A + + +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 83 PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 135
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 136 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 192
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 193 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFTTEFATMAGCLRH 342
F K +++G GA TVYKG +P G V + K R + N + A + + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 79 PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 132 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFTTEFATMAGCLRH 342
F K +++G GA TVYKG +P G V + K R + N + A + + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 77 PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFTTEFATMAGCLRH 342
F K +++G GA TVYKG +P G V + K R + N + A + + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 77 PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFTTEFATMAGCLRH 342
F K +++G GA TVYKG +P G V + K R + N + A + + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 79 PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 132 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 285 GFNKN----RIVGEGASATVYKG-SLPSGGAVAVKRFE-------KPNRVECARNPFTTE 332
GF +N I+G G S+ V + P+ AVK + V+ R E
Sbjct: 1 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKE 60
Query: 333 FATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNI 392
+ H N++QL+ LV++ + G L L + + LS ++ I
Sbjct: 61 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKI 116
Query: 393 VLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIP----------AGT 442
+ + + LH+ I+HRD+K NILLD + N KL DF + GT
Sbjct: 117 MRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGT 173
Query: 443 MGYLAPEYVYSGVPS------EKTDVYSFGVVALEVAAGKSP 478
YLAPE + + ++ D++S GV+ + AG P
Sbjct: 174 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 20/214 (9%)
Query: 285 GFNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
F K +GEG VYK + +G VA+ + E + E + + L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKE-LNHP 62
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
N+V+L N+L LV+E+L + L K + ++ + I L K + + + L++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVY 452
H +++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 453 S-GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 20/214 (9%)
Query: 285 GFNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
F K +GEG VYK + +G VA+ + E + E + + L H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKE-LNHP 61
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
N+V+L N+L LV+E+L + L K + ++ + I L K + + + L++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVY 452
H +++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 453 S-GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 27/213 (12%)
Query: 290 RIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLR---HKNLV 346
+I+GEG +V +G+L ++K K +++ + EF + A C++ H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 347 QLQGWCCEGNEL-----VLVYEYLPNGSLDKILHNN--SSSSIVLSWEKRLNIVLGVASA 399
+L G C E + +++ ++ G L L + + + + L ++ +A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-------------EATIPAGTMGYL 446
+ YL R +HRD+ A N +L + + DF + I + ++
Sbjct: 160 MEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSP 478
A E + V + K+DV++FGV E+A G +P
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIATRGMTP 249
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 32/162 (19%)
Query: 337 AGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
A L +N V+ + + L + EY NG+L ++H S ++ ++ + +
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIH---SENLNQQRDEYWRLFRQI 125
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------------------- 434
ALSY+H + IIHRD+K NI +D N K+GDF
Sbjct: 126 LEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 435 ---EATIPAGTMGYLAPEYVY-SGVPSEKTDVYSFGVVALEV 472
T GT Y+A E + +G +EK D+YS G++ E+
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F K +GEG VYK + +G VA+K+ E + E + + L H N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHPN 66
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+V+L N+L LV+E+L + L + ++ + I L K + + + L++ H
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 123
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVYS 453
+++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 454 -GVPSEKTDVYSFGVVALEVAAGKSPVDND 482
S D++S G + E+ ++ D
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVA--VKRFEKPNRVECARNPFTTEFATMAGCLRH 342
F K +++G GA TVYKG +P G V V E N + A + + +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 111 PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 163
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 164 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 220
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 221 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 91/219 (41%), Gaps = 32/219 (14%)
Query: 279 IKQATLGFNKNRIVGEGASATVYKGSLP-SGGAVAVKRFEKP-----NRVECARNPFTTE 332
IK F ++++G+G+ V+ + A+K +K + VEC E
Sbjct: 13 IKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECT----MVE 68
Query: 333 FATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRL-- 390
++ H L + L V EYL G L + H S LS
Sbjct: 69 KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAA 126
Query: 391 NIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIP 439
I+LG L +LH + I++RD+K NILLD + + K+ DF +
Sbjct: 127 EIILG----LQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEF 179
Query: 440 AGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
GT Y+APE + + D +SFGV+ E+ G+SP
Sbjct: 180 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 30/204 (14%)
Query: 292 VGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+G GA V++ +G A K P+ E + E TM+ LRH LV L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMS-VLRHPTLVNLHD 115
Query: 351 WCCEGNELVLVYEYLPNGSL-DKIL--HNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
+ NE+V++YE++ G L +K+ HN S + + ++ V L ++H
Sbjct: 116 AFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ------VCKGLCHMH--- 166
Query: 408 ERQIIHRDVKACNILLDAEFN--AKLGDFEAT----------IPAGTMGYLAPEYVYSGV 455
E +H D+K NI+ + + KL DF T + GT + APE V G
Sbjct: 167 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPE-VAEGK 225
Query: 456 P-SEKTDVYSFGVVALEVAAGKSP 478
P TD++S GV++ + +G SP
Sbjct: 226 PVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 27/209 (12%)
Query: 291 IVGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQ 349
+VGEG+ V K + +G VA+K+F + + + + E + LRH+NLV L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ-LRHENLVNLL 90
Query: 350 GWCCEGNELVLVYEYLPNGSLD--KILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
C + LV+E++ + LD ++ N +V + + + + + + H
Sbjct: 91 EVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKY------LFQIINGIGFCH--- 141
Query: 408 ERQIIHRDVKACNILLDAEFNAKLGD--FEATIPA---------GTMGYLAPEYVYSGVP 456
IIHRD+K NIL+ KL D F T+ A T Y APE + V
Sbjct: 142 SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVK 201
Query: 457 SEK-TDVYSFGVVALEVAAGKS--PVDND 482
K DV++ G + E+ G+ P D+D
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGEPLFPGDSD 230
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 91/221 (41%), Gaps = 47/221 (21%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKP-NRVECAR-------------NPFTTEFATM 336
+G GA V K +PSG +AVKR N E R PFT F
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFY-- 72
Query: 337 AGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
G L + V W C L + SLDK + + I + +
Sbjct: 73 -GALFREGDV----WICME---------LMDTSLDKFYKQVIDKGQTIPEDILGKIAVSI 118
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT----------IPAGTMGYL 446
AL +LH + +IHRDVK N+L++A K+ DF + I AG Y+
Sbjct: 119 VKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYM 176
Query: 447 APEYVYSGVP----SEKTDVYSFGVVALEVAAGKSPVDNDG 483
APE + + S K+D++S G+ +E+A + P D+ G
Sbjct: 177 APERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 22/204 (10%)
Query: 286 FNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
+ K VGEG VYK G VA+KR E + E + + L H N+
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE-LHHPNI 81
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVL-GVASALSYLH 404
V L L LV+E++ L K+L N + + ++ I L + +++ H
Sbjct: 82 VSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGL----QDSQIKIYLYQLLRGVAHCH 136
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAPEYVY- 452
+ +I+HRD+K N+L++++ KL DF T T+ Y AP+ +
Sbjct: 137 QH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 453 SGVPSEKTDVYSFGVVALEVAAGK 476
S S D++S G + E+ GK
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 91/219 (41%), Gaps = 32/219 (14%)
Query: 279 IKQATLGFNKNRIVGEGASATVYKGSLP-SGGAVAVKRFEKP-----NRVECARNPFTTE 332
IK F ++++G+G+ V+ + A+K +K + VEC E
Sbjct: 12 IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECT----MVE 67
Query: 333 FATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRL-- 390
++ H L + L V EYL G L + H S LS
Sbjct: 68 KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAA 125
Query: 391 NIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIP 439
I+LG L +LH + I++RD+K NILLD + + K+ DF +
Sbjct: 126 EIILG----LQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXF 178
Query: 440 AGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
GT Y+APE + + D +SFGV+ E+ G+SP
Sbjct: 179 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 22/204 (10%)
Query: 286 FNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
+ K VGEG VYK G VA+KR E + E + + L H N+
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE-LHHPNI 81
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVL-GVASALSYLH 404
V L L LV+E++ L K+L N + + ++ I L + +++ H
Sbjct: 82 VSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGL----QDSQIKIYLYQLLRGVAHCH 136
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAPEYVY- 452
+ +I+HRD+K N+L++++ KL DF T T+ Y AP+ +
Sbjct: 137 QH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 453 SGVPSEKTDVYSFGVVALEVAAGK 476
S S D++S G + E+ GK
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+G GA V++ +G A K P+ E + E TM+ LRH LV L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMS-VLRHPTLVNLHD 221
Query: 351 WCCEGNELVLVYEYLPNGSL-DKIL--HNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
+ NE+V++YE++ G L +K+ HN S + + ++ V L ++H
Sbjct: 222 AFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ------VCKGLCHMH--- 272
Query: 408 ERQIIHRDVKACNILLDAEFN--AKLGDFEAT----------IPAGTMGYLAPEYVYSGV 455
E +H D+K NI+ + + KL DF T + GT + APE
Sbjct: 273 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKP 332
Query: 456 PSEKTDVYSFGVVALEVAAGKSP 478
TD++S GV++ + +G SP
Sbjct: 333 VGYYTDMWSVGVLSYILLSGLSP 355
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 290 RIVGEGASATV-YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+ +G+G A V + +G VAVK +K + E + L H N+V+L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFRE-VRIXKVLNHPNIVKL 78
Query: 349 QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
L LV EY G + L + + K IV SA+ Y H++
Sbjct: 79 FEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIV----SAVQYCHQKF- 133
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF----EATIP------AGTMGYLAPEYVYSGVPSE 458
I+HRD+KA N+LLDA+ N K+ DF E T G Y APE ++ G +
Sbjct: 134 --IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPE-LFQGKKYD 190
Query: 459 --KTDVYSFGVVALEVAAGKSPVD 480
+ DV+S GV+ + +G P D
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 20/213 (9%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F K +GEG VYK + +G VA+K+ E + E + + L H N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHPN 66
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+V+L N+L LV+E+L + L + ++ + I L K + + + L++ H
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 123
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVYS 453
+++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 454 -GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 20/214 (9%)
Query: 285 GFNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
F K +GEG VYK + +G VA+K+ E + E + + L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHP 62
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
N+V+L N+L LV+E+L + L + ++ + I L K + + + L++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVY 452
H +++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 120 HSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 453 S-GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F K +GEG VYK + +G VA+K+ E + E + + L H N
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHPN 65
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+V+L N+L LV+E+L + L + ++ + I L K + + + L++ H
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 122
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVYS 453
+++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 123 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
Query: 454 -GVPSEKTDVYSFGVVALEVAAGKSPVDND 482
S D++S G + E+ ++ D
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 115/266 (43%), Gaps = 43/266 (16%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G VY+G + K + +E F E A M ++H NLVQL G
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKE-IKHPNLVQLLGV 323
Query: 352 CCEGNELVLVYEYLPNGSLDKIL---HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
C ++ E++ G+L L + +++VL L + ++SA+ YL +
Sbjct: 324 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---K 375
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVP 456
+ IHR++ A N L+ K+ DF T AG + + APE +
Sbjct: 376 KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 435
Query: 457 SEKTDVYSFGVVALEVAA-GKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKE 515
S K+DV++FGV+ E+A G SP + + V+ L +K D+R+ R E
Sbjct: 436 SIKSDVWAFGVLLWEIATYGMSPYPG---IDLSQVYELLEK-------DYRME----RPE 481
Query: 516 --MERMLMVGLSCVHPNHEKRPSVKE 539
E++ + +C N RPS E
Sbjct: 482 GCPEKVYELMRACWQWNPSDRPSFAE 507
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 70/150 (46%), Gaps = 26/150 (17%)
Query: 340 LRHKNLVQLQGWCCE---GNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
L H+++++ +G CCE L LV EY+P GSL L +S + + L +
Sbjct: 90 LYHEHIIKYKG-CCEDAGAASLQLVMEYVPLGSLRDYLPRHS-----IGLAQLLLFAQQI 143
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF--EATIPAGTMGY--------- 445
++YLH + IHRD+ A N+LLD + K+GDF +P G Y
Sbjct: 144 CEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSP 200
Query: 446 ---LAPEYVYSGVPSEKTDVYSFGVVALEV 472
APE + +DV+SFGV E+
Sbjct: 201 VFWYAPECLKEYKFYYASDVWSFGVTLYEL 230
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 115/266 (43%), Gaps = 43/266 (16%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G VY+G + K + +E F E A M ++H NLVQL G
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKE-IKHPNLVQLLGV 281
Query: 352 CCEGNELVLVYEYLPNGSLDKIL---HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
C ++ E++ G+L L + +++VL L + ++SA+ YL +
Sbjct: 282 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---K 333
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGT---MGYLAPEYVYSGVP 456
+ IHR++ A N L+ K+ DF T AG + + APE +
Sbjct: 334 KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 393
Query: 457 SEKTDVYSFGVVALEVAA-GKSPVDNDGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKE 515
S K+DV++FGV+ E+A G SP + + V+ L +K D+R+ R E
Sbjct: 394 SIKSDVWAFGVLLWEIATYGMSPYPG---IDLSQVYELLEK-------DYRME----RPE 439
Query: 516 --MERMLMVGLSCVHPNHEKRPSVKE 539
E++ + +C N RPS E
Sbjct: 440 GCPEKVYELMRACWQWNPSDRPSFAE 465
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 18/148 (12%)
Query: 342 HKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALS 401
H +V+L +L L+ ++L G L S ++ + E + +A AL
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALALD 140
Query: 402 YLHEECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAPEY 450
+LH II+RD+K NILLD E + KL DF +A GT+ Y+APE
Sbjct: 141 HLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 197
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSP 478
V ++ D +SFGV+ E+ G P
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 24/198 (12%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+GEG VYK G A+K+ E + E + + L+H N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKE-LKHSNIVKLYDV 68
Query: 352 CCEGNELVLVYEYLPNGSLDKILH--NNSSSSIVLSWEKRLNIVLGVASALSYLHEECER 409
LVLV+E+L + L K+L S+ + +L + + ++Y H+ R
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAK-----SFLLQLLNGIAYCHD---R 119
Query: 410 QIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAPEYVY-SGVPS 457
+++HRD+K N+L++ E K+ DF + T T+ Y AP+ + S S
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 458 EKTDVYSFGVVALEVAAG 475
D++S G + E+ G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 24/198 (12%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+GEG VYK G A+K+ E + E + + L+H N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKE-LKHSNIVKLYDV 68
Query: 352 CCEGNELVLVYEYLPNGSLDKILH--NNSSSSIVLSWEKRLNIVLGVASALSYLHEECER 409
LVLV+E+L + L K+L S+ + +L + + ++Y H+ R
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAK-----SFLLQLLNGIAYCHD---R 119
Query: 410 QIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAPEYVY-SGVPS 457
+++HRD+K N+L++ E K+ DF + T T+ Y AP+ + S S
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 458 EKTDVYSFGVVALEVAAG 475
D++S G + E+ G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVY-KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F + + +G G+ V + +G A+K +K V+ + T + +
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY+P G + L S + IVL YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+L+D + K+ DF GT YLAPE + S
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVY-KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F + + +G G+ V + +G A+K +K V+ + T + +
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY+P G + L S + IVL YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+L+D + K+ DF GT YLAPE + S
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 24/198 (12%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+GEG VYK G A+K+ E + E + + L+H N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKE-LKHSNIVKLYDV 68
Query: 352 CCEGNELVLVYEYLPNGSLDKILH--NNSSSSIVLSWEKRLNIVLGVASALSYLHEECER 409
LVLV+E+L + L K+L S+ + +L + + ++Y H+ R
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAK-----SFLLQLLNGIAYCHD---R 119
Query: 410 QIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAPEYVY-SGVPS 457
+++HRD+K N+L++ E K+ DF + T T+ Y AP+ + S S
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYS 179
Query: 458 EKTDVYSFGVVALEVAAG 475
D++S G + E+ G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 18/148 (12%)
Query: 342 HKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALS 401
H +V+L +L L+ ++L G L S ++ + E + +A AL
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALALD 141
Query: 402 YLHEECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAPEY 450
+LH II+RD+K NILLD E + KL DF +A GT+ Y+APE
Sbjct: 142 HLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 198
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSP 478
V ++ D +SFGV+ E+ G P
Sbjct: 199 VNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 18/148 (12%)
Query: 342 HKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALS 401
H +V+L +L L+ ++L G L S ++ + E + +A AL
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALALD 140
Query: 402 YLHEECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAPEY 450
+LH II+RD+K NILLD E + KL DF +A GT+ Y+APE
Sbjct: 141 HLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 197
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSP 478
V ++ D +SFGV+ E+ G P
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 84/199 (42%), Gaps = 24/199 (12%)
Query: 292 VGEGASATVYKGSLP-SGGAVAVKRFEKPNRVECARNPFTTEFATM--AGCLRHKNLVQL 348
+G GA TVYK P SG VA+K PN E E A + H N+V+L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 349 QGWCCEGN-----ELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
C ++ LV+E++ D + + + L E +++ L +L
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQ---DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 128
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIP-AGTMGYLAPEYVYS 453
H C I+HRD+K NIL+ + KL DF A P T+ Y APE +
Sbjct: 129 HANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQ 185
Query: 454 GVPSEKTDVYSFGVVALEV 472
+ D++S G + E+
Sbjct: 186 STYATPVDMWSVGCIFAEM 204
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFTTEFATMAGCLRH 342
F K +++ GA TVYKG +P G V + K R + N + A + + +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 84 PHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 137 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVY-KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F + + +G G+ V + +G A+K +K V+ + T + +
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY+P G + L S + IVL YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+L+D + K+ DF GT YLAPE + S
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 104/248 (41%), Gaps = 53/248 (21%)
Query: 262 DHVCTV---QRVPMRLALTDIKQATLGFNKNRIVGEGASATVYKGSLPSGGAVAVKRFEK 318
DH CT +P + T +Q TL VG+G V++GS G VAVK F
Sbjct: 16 DHSCTSGSGSGLPFLVQRTVARQITLL----ECVGKGRYGEVWRGSW-QGENVAVKIFSS 70
Query: 319 PNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCE-------GNELVLVYEYLPNGSLD 371
+ R T + T+ LRH+N++ G+ +L L+ Y GSL
Sbjct: 71 RDEKSWFRE--TELYNTVM--LRHENIL---GFIASDMTSRHSSTQLWLITHYHEMGSLY 123
Query: 372 KILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC-----ERQIIHRDVKACNILLDAE 426
L + ++ L IVL +AS L++LH E + I HRD+K+ NIL+
Sbjct: 124 DYLQLTTLDTVSC-----LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN 178
Query: 427 FNAKLGDFEATI---------------PAGTMGYLAPEYVYSGVPSE------KTDVYSF 465
+ D + GT Y+APE + + + + D+++F
Sbjct: 179 GQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAF 238
Query: 466 GVVALEVA 473
G+V EVA
Sbjct: 239 GLVLWEVA 246
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 123/291 (42%), Gaps = 64/291 (21%)
Query: 290 RIVGEGA-----SATVYKGSLPSGGA--VAVKRF-EKPNRVECARNPFTTEFATMAGCLR 341
+++G GA +AT Y G +G + VAVK EK + E R +E M
Sbjct: 51 KVLGSGAFGKVMNATAY-GISKTGVSIQVAVKMLKEKADSSE--REALMSELKMMTQLGS 107
Query: 342 HKNLVQLQGWCCEGNELVLVYEYLPNGSL-------------DKILHNNS------SSSI 382
H+N+V L G C + L++EY G L D+I + N
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 383 VLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-------- 434
VL++E L VA + +L + +HRD+ A N+L+ K+ DF
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMS 224
Query: 435 --------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSPVDNDGCV 485
A +P + ++APE ++ G+ + K+DV+S+G++ E+ + G +P G
Sbjct: 225 DSNYVVRGNARLP---VKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY--PGIP 279
Query: 486 IVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPS 536
+ + L + G +D + E + ++ SC + KRPS
Sbjct: 280 VDANFYKLIQNGFKMDQPFY---------ATEEIYIIMQSCWAFDSRKRPS 321
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 26/158 (16%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVAS 398
RH ++++L + +V EY+ G L D I + V E R + + S
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR----VEEMEAR-RLFQQILS 122
Query: 399 ALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT----------IPAGTMGYLAP 448
A+ Y H ++HRD+K N+LLDA NAK+ DF + G+ Y AP
Sbjct: 123 AVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAP 179
Query: 449 EYV----YSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
E + Y+G + D++S GV+ + G P D++
Sbjct: 180 EVISGRLYAG---PEVDIWSCGVILYALLCGTLPFDDE 214
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 89/205 (43%), Gaps = 28/205 (13%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL- 348
+G G+ TVYKG L + V V E +R + R F E + G L+H N+V+
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKG-LQHPNIVRFY 91
Query: 349 QGW--CCEGNE-LVLVYEYLPNGSLDKILHNNSSSSI--VLSWEKRLNIVLGVASALSYL 403
W +G + +VLV E +G+L L I + SW ++ + L +L
Sbjct: 92 DSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQ------ILKGLQFL 145
Query: 404 HEECERQIIHRDVKACNILLDAEF-NAKLGDFE---------ATIPAGTMGYLAPEYVYS 453
H IIHRD+K NI + + K+GD A GT + APE Y
Sbjct: 146 HTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFXAPE-XYE 203
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSP 478
E DVY+FG LE A + P
Sbjct: 204 EKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 20/214 (9%)
Query: 285 GFNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
F K +GEG VYK + +G VA+K+ E + E + + L H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHP 61
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
N+V+L N+L LV+E++ + L + ++ + I L K + + + L++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVY 452
H +++HRD+K N+L++ E KL DF G T+ Y APE +
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 453 S-GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
S D++S G + E+ ++ D +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFTTEFATMAGCLRH 342
F K +++ GA TVYKG +P G V + K R + N + A + + +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 77 PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 26/200 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVK--RFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+GEG ATVYKG S + VA+K R E C ++ L+H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCT----AIREVSLLKDLKHANIVTL 65
Query: 349 QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
L LV+EYL + L + L + +I+ +L + + L+Y H +
Sbjct: 66 HDIIHTEKSLTLVFEYL-DKDLKQYL--DDCGNIINMHNVKL-FLFQLLRGLAYCHRQ-- 119
Query: 409 RQIIHRDVKACNILLDAEFNAKLGDF----EATIPAG-------TMGYLAPEYVYSGVP- 456
+++HRD+K N+L++ KL DF +IP T+ Y P+ +
Sbjct: 120 -KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDY 178
Query: 457 SEKTDVYSFGVVALEVAAGK 476
S + D++ G + E+A G+
Sbjct: 179 STQIDMWGVGCIFYEMATGR 198
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 30/215 (13%)
Query: 286 FNKNRIVGEGASATVYKGS-LPSGGAVAVKRFEKPNRVECA--RNPFTTEFATMAGCLRH 342
F K +++ GA TVYKG +P G V + K R + N + A + + +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 343 KNLVQLQGWCCEGNELVLVYEYLPNGSLDKILH---NNSSSSIVLSWEKRLNIVLGVASA 399
++ +L G C + L+ + +P G L + +N S +L+W + +A
Sbjct: 84 PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT-------------MGYL 446
++YL + R+++HRD+ A N+L+ + K+ DF G + ++
Sbjct: 137 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
A E + + + ++DV+S+GV E+ G P D
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 287 NKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLV 346
+K I+G G V+K + G + K R + E + M L H NL+
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIK-TRGMKDKEEVKNEISVM-NQLDHANLI 149
Query: 347 QLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
QL N++VLV EY+ G L D+I+ S L+ + + + + ++H+
Sbjct: 150 QLYDAFESKNDIVLVMEYVDGGELFDRII----DESYNLTELDTILFMKQICEGIRHMHQ 205
Query: 406 ECERQIIHRDVKACNILL---DAEFNAKLGDF----------EATIPAGTMGYLAPEYVY 452
I+H D+K NIL DA+ K+ DF + + GT +LAPE V
Sbjct: 206 ---MYILHLDLKPENILCVNRDAK-QIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVN 261
Query: 453 SGVPSEKTDVYSFGVVALEVAAGKSPV--DNDG 483
S TD++S GV+A + +G SP DND
Sbjct: 262 YDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA 294
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 84/199 (42%), Gaps = 24/199 (12%)
Query: 292 VGEGASATVYKGSLP-SGGAVAVKRFEKPNRVECARNPFTTEFATM--AGCLRHKNLVQL 348
+G GA TVYK P SG VA+K PN E E A + H N+V+L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 349 QGWCCEGN-----ELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
C ++ LV+E++ D + + + L E +++ L +L
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQ---DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 128
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIP-AGTMGYLAPEYVYS 453
H C I+HRD+K NIL+ + KL DF A P T+ Y APE +
Sbjct: 129 HANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQ 185
Query: 454 GVPSEKTDVYSFGVVALEV 472
+ D++S G + E+
Sbjct: 186 STYATPVDMWSVGCIFAEM 204
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 26/150 (17%)
Query: 340 LRHKNLVQLQGWCCEGN---ELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
L H+++++ +G CCE L LV EY+P GSL L +S + + L +
Sbjct: 73 LYHEHIIKYKG-CCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-----IGLAQLLLFAQQI 126
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF--EATIPAGTMGY--------- 445
++YLH + IHR++ A N+LLD + K+GDF +P G Y
Sbjct: 127 CEGMAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 183
Query: 446 ---LAPEYVYSGVPSEKTDVYSFGVVALEV 472
APE + +DV+SFGV E+
Sbjct: 184 VFWYAPECLKEYKFYYASDVWSFGVTLYEL 213
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 86/216 (39%), Gaps = 31/216 (14%)
Query: 290 RIVGEGASATV----YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
+++G GA V +K S + +FE R + A F E + +
Sbjct: 81 KVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSA---FFWEERDIMAFANSPWV 137
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
VQL + L +V EY+P G L ++ N + W K V AL +H
Sbjct: 138 VQLFCAFQDDKYLYMVMEYMPGGDLVNLMSN---YDVPEKWAKFYTA--EVVLALDAIHS 192
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDFEATI------------PAGTMGYLAPEYVYS 453
+IHRDVK N+LLD + KL DF + GT Y++PE + S
Sbjct: 193 ---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKS 249
Query: 454 ----GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
G + D +S GV E+ G +P D V
Sbjct: 250 QGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV 285
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%)
Query: 391 NIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT----------IPA 440
+ + + AL YL E+ +IHRDVK NILLD KL DF + A
Sbjct: 128 KMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA 185
Query: 441 GTMGYLAPEYVYSGVPSE-----KTDVYSFGVVALEVAAGKSPVDN 481
G Y+APE + P++ + DV+S G+ +E+A G+ P N
Sbjct: 186 GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKN 231
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 109/262 (41%), Gaps = 35/262 (13%)
Query: 288 KNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLV 346
K++ +GEG+ + K S A AVK K R+E E + C H N+V
Sbjct: 15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIISK--RMEANTQ---KEITALKLCEGHPNIV 69
Query: 347 QLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
+L + LV E L G L ++I S S+ I+ + SA+S++H+
Sbjct: 70 KLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASY-----IMRKLVSAVSHMHD 124
Query: 406 ECERQIIHRDVKACNILLDAE---FNAKLGDF-----------EATIPAGTMGYLAPEYV 451
++HRD+K N+L E K+ DF P T+ Y APE +
Sbjct: 125 ---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELL 181
Query: 452 YSGVPSEKTDVYSFGVVALEVAAGKSPVD-NDGCVIVDWVWNLRKKGKLLDAADFRLRGK 510
E D++S GV+ + +G+ P +D + + KK K DF G+
Sbjct: 182 NQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIK---KGDFSFEGE 238
Query: 511 F--NRKEMERMLMVGLSCVHPN 530
N + + L+ GL V PN
Sbjct: 239 AWKNVSQEAKDLIQGLLTVDPN 260
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 84/199 (42%), Gaps = 24/199 (12%)
Query: 292 VGEGASATVYKGSLP-SGGAVAVKRFEKPNRVECARNPFTTEFATM--AGCLRHKNLVQL 348
+G GA TVYK P SG VA+K PN E E A + H N+V+L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 349 QGWCCEGN-----ELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
C ++ LV+E++ D + + + L E +++ L +L
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQ---DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 128
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIP-AGTMGYLAPEYVYS 453
H C I+HRD+K NIL+ + KL DF A P T+ Y APE +
Sbjct: 129 HANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQ 185
Query: 454 GVPSEKTDVYSFGVVALEV 472
+ D++S G + E+
Sbjct: 186 STYATPVDMWSVGCIFAEM 204
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 85/205 (41%), Gaps = 25/205 (12%)
Query: 290 RIVGEGASATV-YKGSLPSGGAVAVKRFEKPNRVEC--ARNPFTTEFATMAGCLRHKNLV 346
R +G+G+ V + A+K K VE RN F E M G L H LV
Sbjct: 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK-ELQIMQG-LEHPFLV 78
Query: 347 QLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEE 406
L + ++ +V + L G L L N + E + + AL YL +
Sbjct: 79 NLWYSFQDEEDMFMVVDLLLGGDLRYHLQQN----VHFKEETVKLFICELVMALDYLQNQ 134
Query: 407 CERQIIHRDVKACNILLDAEFNAKLGDF----------EATIPAGTMGYLAPEYVYS--- 453
+IIHRD+K NILLD + + DF + T AGT Y+APE S
Sbjct: 135 ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKG 191
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSP 478
S D +S GV A E+ G+ P
Sbjct: 192 AGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 26/150 (17%)
Query: 340 LRHKNLVQLQGWCCEGN---ELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
L H+++++ +G CCE L LV EY+P GSL L +S + + L +
Sbjct: 73 LYHEHIIKYKG-CCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-----IGLAQLLLFAQQI 126
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF--EATIPAGTMGY--------- 445
++YLH + IHR++ A N+LLD + K+GDF +P G Y
Sbjct: 127 CEGMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 183
Query: 446 ---LAPEYVYSGVPSEKTDVYSFGVVALEV 472
APE + +DV+SFGV E+
Sbjct: 184 VFWYAPECLKEYKFYYASDVWSFGVTLYEL 213
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 32/162 (19%)
Query: 337 AGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
A L +N V+ + + L + EY N +L ++H S ++ ++ + +
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIH---SENLNQQRDEYWRLFRQI 125
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------------------- 434
ALSY+H + IIHRD+K NI +D N K+GDF
Sbjct: 126 LEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 435 ---EATIPAGTMGYLAPEYVY-SGVPSEKTDVYSFGVVALEV 472
T GT Y+A E + +G +EK D+YS G++ E+
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 26/158 (16%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVAS 398
RH ++++L + +V EY+ G L D I + V E R + + S
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR----VEEMEAR-RLFQQILS 122
Query: 399 ALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT----------IPAGTMGYLAP 448
A+ Y H ++HRD+K N+LLDA NAK+ DF + G+ Y AP
Sbjct: 123 AVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAP 179
Query: 449 EYV----YSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
E + Y+G + D++S GV+ + G P D++
Sbjct: 180 EVISGRLYAG---PEVDIWSCGVILYALLCGTLPFDDE 214
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 20/130 (15%)
Query: 357 ELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDV 416
EL LV EYLP+G L L + + L + L + + YL R+ +HRD+
Sbjct: 84 ELRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYLGS---RRCVHRDL 137
Query: 417 KACNILLDAEFNAKLGDF--EATIP------------AGTMGYLAPEYVYSGVPSEKTDV 462
A NIL+++E + K+ DF +P + + APE + + S ++DV
Sbjct: 138 AARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDV 197
Query: 463 YSFGVVALEV 472
+SFGVV E+
Sbjct: 198 WSFGVVLYEL 207
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 31/171 (18%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH ++++L ++V+V EY D I+ ++ ++ + A
Sbjct: 66 LRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKR-----MTEDEGRRFFQQIICA 120
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT----------IPAGTMGYLAPE 449
+ Y H +I+HRD+K N+LLD N K+ DF + G+ Y APE
Sbjct: 121 IEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPE 177
Query: 450 YV----YSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIVDWVWNLRKK 496
+ Y+G + DV+S G+V + G+ P D+ +++ NL KK
Sbjct: 178 VINGKLYAG---PEVDVWSCGIVLYVMLVGRLPFDD------EFIPNLFKK 219
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 292 VGEGASATVYKGSLPSGGA-VAVKRFEKPNRVECARNPFTTEFATMAGCLR---HKNLVQ 347
+G G V+ G L + VAVK E +F A L+ H N+V+
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCR-----ETLPPDLKAKFLQEARILKQYSHPNIVR 176
Query: 348 LQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
L G C + + +V E + G L + L + L +V A+ + YL +C
Sbjct: 177 LIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR---LRVKTLLQMVGDAAAGMEYLESKC 233
Query: 408 ERQIIHRDVKACNILLDAEFNAKLGDFEAT------IPAGTMG-------YLAPEYVYSG 454
IHRD+ A N L+ + K+ DF + + A + G + APE + G
Sbjct: 234 ---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYG 290
Query: 455 VPSEKTDVYSFGVVALEV-AAGKSPVDN 481
S ++DV+SFG++ E + G SP N
Sbjct: 291 RYSSESDVWSFGILLWETFSLGASPYPN 318
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 22/210 (10%)
Query: 278 DIKQATLGFNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEF--A 334
D+K + K +GEG ATVYK + VA+K+ + +R E T
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 335 TMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVL 394
+ L H N++ L + + LV++++ L+ I+ +NS +VL+ +L
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNS---LVLTPSHIKAYML 119
Query: 395 GVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TM 443
L YLH+ I+HRD+K N+LLD KL DF G T
Sbjct: 120 MTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTR 176
Query: 444 GYLAPEYVYSG-VPSEKTDVYSFGVVALEV 472
Y APE ++ + D+++ G + E+
Sbjct: 177 WYRAPELLFGARMYGVGVDMWAVGCILAEL 206
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 87/221 (39%), Gaps = 47/221 (21%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKP-NRVECAR-------------NPFTTEFATM 336
+G GA V K +PSG AVKR N E R PFT F
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTF--Y 99
Query: 337 AGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
R ++ W C L + SLDK + + I + +
Sbjct: 100 GALFREGDV-----WICXE---------LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSI 145
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT----------IPAGTMGYL 446
AL +LH + +IHRDVK N+L++A K DF + I AG Y
Sbjct: 146 VKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYX 203
Query: 447 APEYVYSGVP----SEKTDVYSFGVVALEVAAGKSPVDNDG 483
APE + + S K+D++S G+ +E+A + P D+ G
Sbjct: 204 APERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWG 244
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F + + +G G+ V + +G A+K +K V+ + T + +
Sbjct: 29 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 88
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY+P G + L S + IVL YLH
Sbjct: 89 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 144
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+L+D + ++ DF GT YLAPE + S
Sbjct: 145 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGY 201
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 202 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 232
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F + R +G G+ V +G A+K +K V+ + T + +
Sbjct: 44 FERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPF 103
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY P G + L S + IVL YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 159
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+L+D + K+ DF GT YLAPE + S
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 17/159 (10%)
Query: 334 ATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIV 393
A++ L+H ++V+L L +V+E++ L + + + V S + +
Sbjct: 77 ASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYM 136
Query: 394 LGVASALSYLHEECERQIIHRDVKACNILLDAEFNA---KLGDFEATIPAGTMG------ 444
+ AL Y H + IIHRDVK N+LL ++ N+ KLGDF I G G
Sbjct: 137 RQILEALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGR 193
Query: 445 -----YLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
++APE V + DV+ GV+ + +G P
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 85/202 (42%), Gaps = 27/202 (13%)
Query: 292 VGEGASATVYKGSLP-SGGAVAVKRFEKPNRVECARN-PFTT--EFATM--AGCLRHKNL 345
+G GA TVYK P SG VA+K PN P +T E A + H N+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 346 VQLQGWCCEGN-----ELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASAL 400
V+L C ++ LV+E++ D + + + L E +++ L
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHVDQ---DLRTYLDKAPPPGLPAETIKDLMRQFLRGL 133
Query: 401 SYLHEECERQIIHRDVKACNILLDAEFNAKLGDF----------EATIPAGTMGYLAPEY 450
+LH C I+HRD+K NIL+ + KL DF T T+ Y APE
Sbjct: 134 DFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEV 190
Query: 451 VYSGVPSEKTDVYSFGVVALEV 472
+ + D++S G + E+
Sbjct: 191 LLQSTYATPVDMWSVGCIFAEM 212
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 26/137 (18%)
Query: 353 CEG-----NELVLVYEYLPNGSLDK------ILHNNSSSSIVLSWEKRLNIVLGVASALS 401
CEG +E+ ++YEY+ N S+ K +L N + I + K I+ V ++ S
Sbjct: 108 CEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKC--IIKSVLNSFS 165
Query: 402 YLHEECERQIIHRDVKACNILLDAEFNAKLGDF---EATIPA------GTMGYLAPEYV- 451
Y+H E + I HRDVK NIL+D KL DF E + GT ++ PE+
Sbjct: 166 YIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFS 223
Query: 452 -YSGVPSEKTDVYSFGV 467
S K D++S G+
Sbjct: 224 NESSYNGAKVDIWSLGI 240
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASAL 400
RH L L+ + L V EY G L H S V + E+ + SAL
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERARFYGAEIVSAL 118
Query: 401 SYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIPA--GTMGYLAPE 449
YLH R +++RD+K N++LD + + K+ DF AT+ GT YLAPE
Sbjct: 119 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 175
Query: 450 YVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
+ D + GVV E+ G+ P N
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASAL 400
RH L L+ + L V EY G L H S V + E+ + SAL
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERARFYGAEIVSAL 118
Query: 401 SYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIPA--GTMGYLAPE 449
YLH R +++RD+K N++LD + + K+ DF AT+ GT YLAPE
Sbjct: 119 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 175
Query: 450 YVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
+ D + GVV E+ G+ P N
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 292 VGEGASATVYKGSLPSGGA-VAVKRFEKPNRVECARNPFTTEFATMAGCLR---HKNLVQ 347
+G G V+ G L + VAVK E +F A L+ H N+V+
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCR-----ETLPPDLKAKFLQEARILKQYSHPNIVR 176
Query: 348 LQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
L G C + + +V E + G L + L + L +V A+ + YL +C
Sbjct: 177 LIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR---LRVKTLLQMVGDAAAGMEYLESKC 233
Query: 408 ERQIIHRDVKACNILLDAEFNAKLGDFEAT------IPAGTMG-------YLAPEYVYSG 454
IHRD+ A N L+ + K+ DF + + A + G + APE + G
Sbjct: 234 ---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYG 290
Query: 455 VPSEKTDVYSFGVVALEV-AAGKSPVDN 481
S ++DV+SFG++ E + G SP N
Sbjct: 291 RYSSESDVWSFGILLWETFSLGASPYPN 318
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASAL 400
RH L L+ + L V EY G L H S V + E+ + SAL
Sbjct: 66 RHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERARFYGAEIVSAL 121
Query: 401 SYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIPA--GTMGYLAPE 449
YLH R +++RD+K N++LD + + K+ DF AT+ GT YLAPE
Sbjct: 122 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 178
Query: 450 YVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
+ D + GVV E+ G+ P N
Sbjct: 179 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 210
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 28/228 (12%)
Query: 271 PMRLALTDIKQATLGFNKNRIVGEGASATVYKGS-LPSGGAVAVK---RFEKPNRVECAR 326
P + L +K+ L K +++G GA TVYKG +P G V + + + N A
Sbjct: 6 PNQALLRILKETEL--RKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKAN 63
Query: 327 NPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSW 386
E MAG + + +L G C + LV + +P G L + N L
Sbjct: 64 KEILDEAYVMAG-VGSPYVSRLLGICLTST-VQLVTQLMPYGCLLDHVRENRGR---LGS 118
Query: 387 EKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-----------E 435
+ LN + +A +SYL + +++HRD+ A N+L+ + + K+ DF E
Sbjct: 119 QDLLNWCMQIAKGMSYLEDV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE 175
Query: 436 ATIPAGT--MGYLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKSPVD 480
G + ++A E + + ++DV+S+GV E+ G P D
Sbjct: 176 YHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 23/209 (11%)
Query: 286 FNKNRIVGEGASATVYK----GSLPSGGAVAVKRFEKPNRVECARNPFTTEFA-TMAGCL 340
F R++G+G V++ +G A+K +K V A++ T+ + +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASAL 400
+H +V L G +L L+ EYL G L L + + + ++ AL
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREG----IFMEDTACFYLAEISMAL 134
Query: 401 SYLHEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIP---AGTMGYLAPE 449
+LH+ + II+RD+K NI+L+ + + KL DF + T+ GT+ Y+APE
Sbjct: 135 GHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPE 191
Query: 450 YVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
+ + D +S G + ++ G P
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 50/223 (22%)
Query: 287 NKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFT--TEFATMAGCLR--- 341
+ +R++G+G VY G + NR++CA + TE + LR
Sbjct: 24 HSDRVIGKGHFGVVYHGEYID---------QAQNRIQCAIKSLSRITEMQQVEAFLREGL 74
Query: 342 ------HKNLVQLQGWCC--EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIV 393
H N++ L G EG VL+ Y+ +G L + + + + V + ++
Sbjct: 75 LMRGLNHPNVLALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTV---KDLISFG 130
Query: 394 LGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF------------------E 435
L VA + YL E++ +HRD+ A N +LD F K+ DF
Sbjct: 131 LQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRH 187
Query: 436 ATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
A +P + + A E + + + K+DV+SFGV+ E+ +P
Sbjct: 188 ARLP---VKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASAL 400
RH L L+ + L V EY G L H S V + E+ + SAL
Sbjct: 68 RHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERARFYGAEIVSAL 123
Query: 401 SYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIPA--GTMGYLAPE 449
YLH R +++RD+K N++LD + + K+ DF AT+ GT YLAPE
Sbjct: 124 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 180
Query: 450 YVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
+ D + GVV E+ G+ P N
Sbjct: 181 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 212
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 23/209 (11%)
Query: 286 FNKNRIVGEGASATVYK----GSLPSGGAVAVKRFEKPNRVECARNPFTTEFA-TMAGCL 340
F R++G+G V++ +G A+K +K V A++ T+ + +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASAL 400
+H +V L G +L L+ EYL G L L + + + ++ AL
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREG----IFMEDTACFYLAEISMAL 134
Query: 401 SYLHEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIP---AGTMGYLAPE 449
+LH+ + II+RD+K NI+L+ + + KL DF + T+ GT+ Y+APE
Sbjct: 135 GHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPE 191
Query: 450 YVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
+ + D +S G + ++ G P
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASAL 400
RH L L+ + L V EY G L H S V + E+ + SAL
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERARFYGAEIVSAL 118
Query: 401 SYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIPA--GTMGYLAPE 449
YLH R +++RD+K N++LD + + K+ DF AT+ GT YLAPE
Sbjct: 119 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 450 YVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
+ D + GVV E+ G+ P N
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 46/215 (21%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
VG+G V++GS G VAVK F + R T + T+ LRH+N++ G+
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE--TELYNTVM--LRHENIL---GF 67
Query: 352 CCE-------GNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+L L+ Y GSL L + ++ L IVL +AS L++LH
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLH 122
Query: 405 EEC-----ERQIIHRDVKACNILLDAEFNAKLGDFEATI---------------PAGTMG 444
E + I HRD+K+ NIL+ + D + GT
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 445 YLAPEYVYSGVPSE------KTDVYSFGVVALEVA 473
Y+APE + + + + D+++FG+V EVA
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F + + +G G+ V + +G A+K +K V+ + T + +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY+P G + L S + IVL YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+L+D + ++ DF GT YLAPE + S
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVY-KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F + + +G G+ V + +G A+K +K V+ + T + +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY+P G + L S + IVL YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 159
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+L+D + ++ DF GT YLAPE + S
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGY 216
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 90/227 (39%), Gaps = 25/227 (11%)
Query: 276 LTDIKQATLGFNKNRIVGEGASATVYKGSLPSGGAV-AVKRFEKPNRVECARNPFTTEFA 334
+ D++ + +++G GA V S V A+K K ++ + + F E
Sbjct: 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 120
Query: 335 TMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVL 394
+ +VQL + L +V EY+P G L ++ N + W +
Sbjct: 121 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFY--TA 175
Query: 395 GVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATI------------PAGT 442
V AL +H IHRDVK N+LLD + KL DF + GT
Sbjct: 176 EVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGT 232
Query: 443 MGYLAPEYVYS----GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
Y++PE + S G + D +S GV E+ G +P D V
Sbjct: 233 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV 279
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 46/215 (21%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
VG+G V++GS G VAVK F + R T + T+ LRH+N++ G+
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE--TELYNTVM--LRHENIL---GF 67
Query: 352 CCE-------GNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+L L+ Y GSL L + ++ L IVL +AS L++LH
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLH 122
Query: 405 EEC-----ERQIIHRDVKACNILLDAEFNAKLGDFEATI---------------PAGTMG 444
E + I HRD+K+ NIL+ + D + GT
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 445 YLAPEYVYSGVPSE------KTDVYSFGVVALEVA 473
Y+APE + + + + D+++FG+V EVA
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 48/221 (21%)
Query: 291 IVGEGASATVYKG-SLPSGGAVAVKRFEK-PNRVECARNPFTTEFATMAGCLRHKNLVQL 348
++GEGA A V +L + AVK EK P + R+ E + C H+N+++L
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHI---RSRVFREVEMLYQCQGHRNVLEL 76
Query: 349 QGWCCEGNELVLVYEYLPNGSLDKILH-----NNSSSSIVLSWEKRLNIVLGVASALSYL 403
+ E + LV+E + GS+ +H N +S+V V VASAL +L
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVV---------VQDVASALDFL 127
Query: 404 HEECERQIIHRDVKACNILLDAEFN---AKLGDF------------------EATIPAGT 442
H + I HRD+K NIL + K+ DF E P G+
Sbjct: 128 H---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGS 184
Query: 443 MGYLAPEYV-----YSGVPSEKTDVYSFGVVALEVAAGKSP 478
Y+APE V + + ++ D++S GV+ + +G P
Sbjct: 185 AEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVY-KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F + + +G G+ V + +G A+K +K V+ + T + +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY+P G + L S + IVL YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 159
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+L+D + ++ DF GT YLAPE + S
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASAL 400
RH L L+ + L V EY G L H S V S ++ + SAL
Sbjct: 206 RHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFH--LSRERVFSEDRARFYGAEIVSAL 261
Query: 401 SYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIPA--GTMGYLAPE 449
YLH E+ +++RD+K N++LD + + K+ DF AT+ GT YLAPE
Sbjct: 262 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPE 319
Query: 450 YVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
+ D + GVV E+ G+ P N
Sbjct: 320 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 351
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 90/227 (39%), Gaps = 25/227 (11%)
Query: 276 LTDIKQATLGFNKNRIVGEGASATVYKGSLPSGGAV-AVKRFEKPNRVECARNPFTTEFA 334
+ D++ + +++G GA V S V A+K K ++ + + F E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 335 TMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVL 394
+ +VQL + L +V EY+P G L ++ N + W +
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTA-- 180
Query: 395 GVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATI------------PAGT 442
V AL +H IHRDVK N+LLD + KL DF + GT
Sbjct: 181 EVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGT 237
Query: 443 MGYLAPEYVYS----GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
Y++PE + S G + D +S GV E+ G +P D V
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV 284
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 95/237 (40%), Gaps = 60/237 (25%)
Query: 280 KQATLGFNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGC 339
K+ + F + ++G G V+K G V R K N + R E +A
Sbjct: 8 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER-----EVKALAK- 61
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHN--------NSSSS---------- 381
L H N+V G C +G ++Y P S D + + NSS S
Sbjct: 62 LDHVNIVHYNG-CWDG------FDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQME 114
Query: 382 -----IVLSW-EKR----------LNIVLGVASALSYLHEECERQIIHRDVKACNILLDA 425
+ W EKR L + + + Y+H +++IHRD+K NI L
Sbjct: 115 FCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVD 171
Query: 426 EFNAKLGDF----------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEV 472
K+GDF + T GT+ Y++PE + S ++ D+Y+ G++ E+
Sbjct: 172 TKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASAL 400
RH L L+ + L V EY G L H S V + E+ + SAL
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERARFYGAEIVSAL 118
Query: 401 SYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIPA--GTMGYLAPE 449
YLH R +++RD+K N++LD + + K+ DF AT+ GT YLAPE
Sbjct: 119 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 450 YVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
+ D + GVV E+ G+ P N
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F + + +G G+ V + +G A+K +K V+ + T + +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY+P G + L S + IVL YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+L+D + ++ DF GT YLAPE + S
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASAL 400
RH L L+ + L V EY G L H S V S ++ + SAL
Sbjct: 209 RHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFH--LSRERVFSEDRARFYGAEIVSAL 264
Query: 401 SYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIPA--GTMGYLAPE 449
YLH E+ +++RD+K N++LD + + K+ DF AT+ GT YLAPE
Sbjct: 265 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPE 322
Query: 450 YVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
+ D + GVV E+ G+ P N
Sbjct: 323 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 354
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASAL 400
RH L L+ + L V EY G L H S V + E+ + SAL
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERARFYGAEIVSAL 118
Query: 401 SYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIPA--GTMGYLAPE 449
YLH R +++RD+K N++LD + + K+ DF AT+ GT YLAPE
Sbjct: 119 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 450 YVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
+ D + GVV E+ G+ P N
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 90/227 (39%), Gaps = 25/227 (11%)
Query: 276 LTDIKQATLGFNKNRIVGEGASATVYKGSLPSGGAV-AVKRFEKPNRVECARNPFTTEFA 334
+ D++ + +++G GA V S V A+K K ++ + + F E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 335 TMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVL 394
+ +VQL + L +V EY+P G L ++ N + W +
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFY--TA 180
Query: 395 GVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATI------------PAGT 442
V AL +H IHRDVK N+LLD + KL DF + GT
Sbjct: 181 EVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGT 237
Query: 443 MGYLAPEYVYS----GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
Y++PE + S G + D +S GV E+ G +P D V
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV 284
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F + + +G G+ V + +G A+K +K V+ + T + +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY+P G + L S + IVL YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+L+D + ++ DF GT YLAPE + S
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASAL 400
RH L L+ + L V EY G L H S V S ++ + SAL
Sbjct: 68 RHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFH--LSRERVFSEDRARFYGAEIVSAL 123
Query: 401 SYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIPA--GTMGYLAPE 449
YLH E+ +++RD+K N++LD + + K+ DF AT+ GT YLAPE
Sbjct: 124 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPE 181
Query: 450 YVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
+ D + GVV E+ G+ P N
Sbjct: 182 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 213
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 48/221 (21%)
Query: 291 IVGEGASATVYKG-SLPSGGAVAVKRFEK-PNRVECARNPFTTEFATMAGCLRHKNLVQL 348
++GEGA A V +L + AVK EK P + R+ E + C H+N+++L
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHI---RSRVFREVEMLYQCQGHRNVLEL 76
Query: 349 QGWCCEGNELVLVYEYLPNGSLDKILH-----NNSSSSIVLSWEKRLNIVLGVASALSYL 403
+ E + LV+E + GS+ +H N +S+V V VASAL +L
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVV---------VQDVASALDFL 127
Query: 404 HEECERQIIHRDVKACNILLDAEFN---AKLGDF------------------EATIPAGT 442
H + I HRD+K NIL + K+ DF E P G+
Sbjct: 128 H---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGS 184
Query: 443 MGYLAPEYV-----YSGVPSEKTDVYSFGVVALEVAAGKSP 478
Y+APE V + + ++ D++S GV+ + +G P
Sbjct: 185 AEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASAL 400
RH L L+ + L V EY G L H S V S ++ + SAL
Sbjct: 67 RHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFH--LSRERVFSEDRARFYGAEIVSAL 122
Query: 401 SYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIPA--GTMGYLAPE 449
YLH E+ +++RD+K N++LD + + K+ DF AT+ GT YLAPE
Sbjct: 123 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPE 180
Query: 450 YVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
+ D + GVV E+ G+ P N
Sbjct: 181 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 212
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 94/222 (42%), Gaps = 35/222 (15%)
Query: 286 FNKNRIVGEGASATVYK----GSLPSGGAVAVKRFEKPNRVECARNPFTTEFA-TMAGCL 340
F +++G GA V+ +G A+K +K V+ A+ TTE T L
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAK---TTEHTRTERQVL 112
Query: 341 RHKN----LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLG- 395
H LV L +L L+ +Y+ G L L + E + I +G
Sbjct: 113 EHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFT-----EHEVQIYVGE 167
Query: 396 VASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF------------EATIPAGTM 443
+ AL +LH+ II+RD+K NILLD+ + L DF A GT+
Sbjct: 168 IVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTI 224
Query: 444 GYLAPEYVYSGVP--SEKTDVYSFGVVALEVAAGKSPVDNDG 483
Y+AP+ V G + D +S GV+ E+ G SP DG
Sbjct: 225 EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDG 266
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASAL 400
RH L L+ + L V EY G L H S V S ++ + SAL
Sbjct: 66 RHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFH--LSRERVFSEDRARFYGAEIVSAL 121
Query: 401 SYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIPA--GTMGYLAPE 449
YLH E+ +++RD+K N++LD + + K+ DF AT+ GT YLAPE
Sbjct: 122 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPE 179
Query: 450 YVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
+ D + GVV E+ G+ P N
Sbjct: 180 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 211
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F + + +G G+ V + +G A+K +K V+ + T + +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY P G + L S + IVL YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+++D + K+ DF GT YLAPE + S
Sbjct: 159 S---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 20/131 (15%)
Query: 356 NELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRD 415
L LV EYLP+G L L + + L + L + + YL R+ +HRD
Sbjct: 86 QSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYLGS---RRCVHRD 139
Query: 416 VKACNILLDAEFNAKLGDF--EATIPAGTMGYL------------APEYVYSGVPSEKTD 461
+ A NIL+++E + K+ DF +P Y+ APE + + S ++D
Sbjct: 140 LAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSD 199
Query: 462 VYSFGVVALEV 472
V+SFGVV E+
Sbjct: 200 VWSFGVVLYEL 210
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 123/287 (42%), Gaps = 50/287 (17%)
Query: 293 GEGASATVYKGSLPSGGAVAVK-RFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
G+ AT Y G + S A+ V + KP+ R +E ++ H N+V L G
Sbjct: 37 GKVVEATAY-GLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGA 95
Query: 352 CCEGNELVLVYEYLPNGSL--------DKILHNNSSSSIV------LSWEKRLNIVLGVA 397
C G +++ EY G L D + + +S +I+ L E L+ VA
Sbjct: 96 CTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVA 155
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF----------------EATIPAG 441
+++L + IHRD+ A NILL K+ DF A +P
Sbjct: 156 KGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP-- 210
Query: 442 TMGYLAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLL 500
+ ++APE +++ V + ++DV+S+G+ E+ + G SP G + + + K+G
Sbjct: 211 -VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY--PGMPVDSKFYKMIKEG--- 264
Query: 501 DAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILKGE 547
FR+ M + +C + KRP+ K+ ++++ +
Sbjct: 265 ----FRMLSP--EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 20/131 (15%)
Query: 356 NELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRD 415
L LV EYLP+G L L + + L + L + + YL R+ +HRD
Sbjct: 87 QSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYLGS---RRCVHRD 140
Query: 416 VKACNILLDAEFNAKLGDF--EATIPAGTMGYL------------APEYVYSGVPSEKTD 461
+ A NIL+++E + K+ DF +P Y+ APE + + S ++D
Sbjct: 141 LAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSD 200
Query: 462 VYSFGVVALEV 472
V+SFGVV E+
Sbjct: 201 VWSFGVVLYEL 211
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 20/131 (15%)
Query: 356 NELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRD 415
L LV EYLP+G L L + + L + L + + YL R+ +HRD
Sbjct: 99 QSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYLGS---RRCVHRD 152
Query: 416 VKACNILLDAEFNAKLGDF--EATIPAGTMGYL------------APEYVYSGVPSEKTD 461
+ A NIL+++E + K+ DF +P Y+ APE + + S ++D
Sbjct: 153 LAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSD 212
Query: 462 VYSFGVVALEV 472
V+SFGVV E+
Sbjct: 213 VWSFGVVLYEL 223
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 123/287 (42%), Gaps = 50/287 (17%)
Query: 293 GEGASATVYKGSLPSGGAVAVK-RFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
G+ AT Y G + S A+ V + KP+ R +E ++ H N+V L G
Sbjct: 53 GKVVEATAY-GLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGA 111
Query: 352 CCEGNELVLVYEYLPNGSL--------DKILHNNSSSSIV------LSWEKRLNIVLGVA 397
C G +++ EY G L D + + +S +I+ L E L+ VA
Sbjct: 112 CTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVA 171
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF----------------EATIPAG 441
+++L + IHRD+ A NILL K+ DF A +P
Sbjct: 172 KGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP-- 226
Query: 442 TMGYLAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLL 500
+ ++APE +++ V + ++DV+S+G+ E+ + G SP G + + + K+G
Sbjct: 227 -VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY--PGMPVDSKFYKMIKEG--- 280
Query: 501 DAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILKGE 547
FR+ M + +C + KRP+ K+ ++++ +
Sbjct: 281 ----FRMLSP--EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 321
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 123/287 (42%), Gaps = 50/287 (17%)
Query: 293 GEGASATVYKGSLPSGGAVAVK-RFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
G+ AT Y G + S A+ V + KP+ R +E ++ H N+V L G
Sbjct: 55 GKVVEATAY-GLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGA 113
Query: 352 CCEGNELVLVYEYLPNGSL--------DKILHNNSSSSIV------LSWEKRLNIVLGVA 397
C G +++ EY G L D + + +S +I+ L E L+ VA
Sbjct: 114 CTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVA 173
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF----------------EATIPAG 441
+++L + IHRD+ A NILL K+ DF A +P
Sbjct: 174 KGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP-- 228
Query: 442 TMGYLAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLL 500
+ ++APE +++ V + ++DV+S+G+ E+ + G SP G + + + K+G
Sbjct: 229 -VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY--PGMPVDSKFYKMIKEG--- 282
Query: 501 DAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILKGE 547
FR+ M + +C + KRP+ K+ ++++ +
Sbjct: 283 ----FRMLSP--EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 323
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 87/214 (40%), Gaps = 42/214 (19%)
Query: 290 RIVGEGASATVYKGSL------PSGGAVAVKRFEKPNRVECARNP---FTTEFATMAGCL 340
R +G GA VY+G + PS VAVK + C+ F E A + L
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLME-ALIISKL 91
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNN---SSSSIVLSWEKRLNIVLGVA 397
H+N+V+ G + ++ E + G L L S L+ L++ +A
Sbjct: 92 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFN---AKLGDFE----------------ATI 438
YL E IHRD+ A N LL AK+GDF A +
Sbjct: 152 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 208
Query: 439 PAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEV 472
P + ++ PE G+ + KTD +SFGV+ E+
Sbjct: 209 P---VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 26/211 (12%)
Query: 286 FNKNRIVGEGASATVY--KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
+ R++G+G+ V K + +G AVK K + + L H
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 92
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
N+++L + + LV E G L D+I+ S + + I+ V S ++Y
Sbjct: 93 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSGITY 147
Query: 403 LHEECERQIIHRDVKACNILLDA---EFNAKLGD------FEATIPA----GTMGYLAPE 449
+H+ +I+HRD+K N+LL++ + N ++ D FEA+ GT Y+APE
Sbjct: 148 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPE 204
Query: 450 YVYSGVPSEKTDVYSFGVVALEVAAGKSPVD 480
V G EK DV+S GV+ + +G P +
Sbjct: 205 -VLHGTYDEKCDVWSTGVILYILLSGCPPFN 234
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 123/287 (42%), Gaps = 50/287 (17%)
Query: 293 GEGASATVYKGSLPSGGAVAVK-RFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
G+ AT Y G + S A+ V + KP+ R +E ++ H N+V L G
Sbjct: 60 GKVVEATAY-GLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGA 118
Query: 352 CCEGNELVLVYEYLPNGSL--------DKILHNNSSSSIV------LSWEKRLNIVLGVA 397
C G +++ EY G L D + + +S +I+ L E L+ VA
Sbjct: 119 CTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVA 178
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF----------------EATIPAG 441
+++L + IHRD+ A NILL K+ DF A +P
Sbjct: 179 KGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP-- 233
Query: 442 TMGYLAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLL 500
+ ++APE +++ V + ++DV+S+G+ E+ + G SP G + + + K+G
Sbjct: 234 -VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY--PGMPVDSKFYKMIKEG--- 287
Query: 501 DAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILKGE 547
FR+ M + +C + KRP+ K+ ++++ +
Sbjct: 288 ----FRMLSP--EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 328
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 26/209 (12%)
Query: 286 FNKNRIVGEGASATVY--KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
+ R++G+G+ V K + +G AVK K + + L H
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
N+++L + + LV E G L D+I+ S + + I+ V S ++Y
Sbjct: 87 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSGITY 141
Query: 403 LHEECERQIIHRDVKACNILLDA---EFNAKLGD------FEATIPA----GTMGYLAPE 449
+H+ +I+HRD+K N+LL++ + N ++ D FEA+ GT Y+APE
Sbjct: 142 MHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPE 198
Query: 450 YVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
V G EK DV+S GV+ + +G P
Sbjct: 199 -VLHGTYDEKCDVWSTGVILYILLSGCPP 226
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 18/153 (11%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
L H+++V G+ + + + +V E SL ++ + + + IVLG
Sbjct: 72 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC--- 128
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAP 448
YLH ++IHRD+K N+ L+ + K+GDF + GT Y+AP
Sbjct: 129 -QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 184
Query: 449 EYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
E + S + DV+S G + + GK P +
Sbjct: 185 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 217
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 39/195 (20%)
Query: 312 AVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQ-LQGWCCEGNELVL------VYEY 364
A+KR PNR E AR E +A L H +V+ W + L VY Y
Sbjct: 34 AIKRIRLPNR-ELAREKVMREVKALAK-LEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLY 91
Query: 365 LPNGSLDKI-LHNNSSSSIVLSWEKR---LNIVLGVASALSYLHEECERQIIHRDVKACN 420
+ K L + + + +R L+I L +A A+ +LH + ++HRD+K N
Sbjct: 92 IQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSN 148
Query: 421 ILLDAEFNAKLGDF-----------EATI----PA--------GTMGYLAPEYVYSGVPS 457
I + K+GDF E T+ PA GT Y++PE ++ S
Sbjct: 149 IFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYS 208
Query: 458 EKTDVYSFGVVALEV 472
K D++S G++ E+
Sbjct: 209 HKVDIFSLGLILFEL 223
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 123/287 (42%), Gaps = 50/287 (17%)
Query: 293 GEGASATVYKGSLPSGGAVAVK-RFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
G+ AT Y G + S A+ V + KP+ R +E ++ H N+V L G
Sbjct: 60 GKVVEATAY-GLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGA 118
Query: 352 CCEGNELVLVYEYLPNGSL--------DKILHNNSSSSIV------LSWEKRLNIVLGVA 397
C G +++ EY G L D + + +S +I+ L E L+ VA
Sbjct: 119 CTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVA 178
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF----------------EATIPAG 441
+++L + IHRD+ A NILL K+ DF A +P
Sbjct: 179 KGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLP-- 233
Query: 442 TMGYLAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSPVDNDGCVIVDWVWNLRKKGKLL 500
+ ++APE +++ V + ++DV+S+G+ E+ + G SP G + + + K+G
Sbjct: 234 -VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY--PGMPVDSKFYKMIKEG--- 287
Query: 501 DAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILKGE 547
FR+ M + +C + KRP+ K+ ++++ +
Sbjct: 288 ----FRMLSP--EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 328
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 18/153 (11%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
L H+++V G+ + + + +V E SL ++ + + + IVLG
Sbjct: 96 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC--- 152
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAP 448
YLH ++IHRD+K N+ L+ + K+GDF + GT Y+AP
Sbjct: 153 -QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 208
Query: 449 EYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
E + S + DV+S G + + GK P +
Sbjct: 209 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 241
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 18/159 (11%)
Query: 356 NELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRD 415
+L LV + G + ++N + + + + S L +LH+ R II+RD
Sbjct: 258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRD 314
Query: 416 VKACNILLDAEFNAKLGDFEATIP-----------AGTMGYLAPEYVYSGVPSEKTDVYS 464
+K N+LLD + N ++ D + AGT G++APE + D ++
Sbjct: 315 LKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFA 374
Query: 465 FGVVALEVAAGKSPVDNDGCVIVDWVWNLRKKGKLLDAA 503
GV E+ A + P G + V N K ++L+ A
Sbjct: 375 LGVTLYEMIAARGPFRARG----EKVENKELKQRVLEQA 409
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 18/153 (11%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
L H+++V G+ + + + +V E SL ++ + + + IVLG
Sbjct: 98 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC--- 154
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAP 448
YLH ++IHRD+K N+ L+ + K+GDF + GT Y+AP
Sbjct: 155 -QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 210
Query: 449 EYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
E + S + DV+S G + + GK P +
Sbjct: 211 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 243
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 18/159 (11%)
Query: 356 NELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRD 415
+L LV + G + ++N + + + + S L +LH+ R II+RD
Sbjct: 258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRD 314
Query: 416 VKACNILLDAEFNAKLGDFEATIP-----------AGTMGYLAPEYVYSGVPSEKTDVYS 464
+K N+LLD + N ++ D + AGT G++APE + D ++
Sbjct: 315 LKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFA 374
Query: 465 FGVVALEVAAGKSPVDNDGCVIVDWVWNLRKKGKLLDAA 503
GV E+ A + P G + V N K ++L+ A
Sbjct: 375 LGVTLYEMIAARGPFRARG----EKVENKELKQRVLEQA 409
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 88/211 (41%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F + + +G G+ V + +G A+K +K V+ T + +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY P G + L S + IVL YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+++D + K+ DF GT YLAPE + S
Sbjct: 159 S---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 18/159 (11%)
Query: 356 NELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRD 415
+L LV + G + ++N + + + + S L +LH+ R II+RD
Sbjct: 258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRD 314
Query: 416 VKACNILLDAEFNAKLGDFEATIP-----------AGTMGYLAPEYVYSGVPSEKTDVYS 464
+K N+LLD + N ++ D + AGT G++APE + D ++
Sbjct: 315 LKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFA 374
Query: 465 FGVVALEVAAGKSPVDNDGCVIVDWVWNLRKKGKLLDAA 503
GV E+ A + P G + V N K ++L+ A
Sbjct: 375 LGVTLYEMIAARGPFRARG----EKVENKELKQRVLEQA 409
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 87/214 (40%), Gaps = 42/214 (19%)
Query: 290 RIVGEGASATVYKGSL------PSGGAVAVKRFEKPNRVECARNP---FTTEFATMAGCL 340
R +G GA VY+G + PS VAVK + C+ F E A + L
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLME-ALIISKL 105
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNN---SSSSIVLSWEKRLNIVLGVA 397
H+N+V+ G + ++ E + G L L S L+ L++ +A
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFN---AKLGDFE----------------ATI 438
YL E IHRD+ A N LL AK+GDF A +
Sbjct: 166 CGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 222
Query: 439 PAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEV 472
P + ++ PE G+ + KTD +SFGV+ E+
Sbjct: 223 P---VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 25/208 (12%)
Query: 286 FNKNRIVGEGA-SATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
++ ++G GA S + + VA+K K +E E A + ++H N
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAK-EALEGKEGSMENEIAVLHK-IKHPN 77
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
+V L G L L+ + + G L D+I+ + S ++ V A+ YL
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----RLIFQVLDAVKYL 132
Query: 404 HEECERQIIHRDVKACNIL---LDAEFNAKLGDF----------EATIPAGTMGYLAPEY 450
H+ I+HRD+K N+L LD + + DF + GT GY+APE
Sbjct: 133 HD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEV 189
Query: 451 VYSGVPSEKTDVYSFGVVALEVAAGKSP 478
+ S+ D +S GV+A + G P
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 79/199 (39%), Gaps = 19/199 (9%)
Query: 286 FNKNRIVGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F + +G G+ V+K S G AVKR P R R E + +H
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPC 118
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
V+L+ EG L L E +S W + +L AL++LH
Sbjct: 119 CVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLL----ALAHLH 174
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGTMG----------YLAPEYVYSG 454
+ ++H DVK NI L KLGDF + GT G Y+APE + G
Sbjct: 175 SQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPE-LLQG 230
Query: 455 VPSEKTDVYSFGVVALEVA 473
DV+S G+ LEVA
Sbjct: 231 SYGTAADVFSLGLTILEVA 249
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 18/159 (11%)
Query: 356 NELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRD 415
+L LV + G + ++N + + + + S L +LH+ R II+RD
Sbjct: 258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRD 314
Query: 416 VKACNILLDAEFNAKLGDFEATIP-----------AGTMGYLAPEYVYSGVPSEKTDVYS 464
+K N+LLD + N ++ D + AGT G++APE + D ++
Sbjct: 315 LKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFA 374
Query: 465 FGVVALEVAAGKSPVDNDGCVIVDWVWNLRKKGKLLDAA 503
GV E+ A + P G + V N K ++L+ A
Sbjct: 375 LGVTLYEMIAARGPFRARG----EKVENKELKQRVLEQA 409
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 25/203 (12%)
Query: 291 IVGEGA-SATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQ 349
++G GA S + + VA+K K +E E A + ++H N+V L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAK-EALEGKEGSMENEIAVLHK-IKHPNIVALD 82
Query: 350 GWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
G L L+ + + G L D+I+ + S ++ V A+ YLH+
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----RLIFQVLDAVKYLHD--- 134
Query: 409 RQIIHRDVKACNIL---LDAEFNAKLGDF----------EATIPAGTMGYLAPEYVYSGV 455
I+HRD+K N+L LD + + DF + GT GY+APE +
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 456 PSEKTDVYSFGVVALEVAAGKSP 478
S+ D +S GV+A + G P
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 15/189 (7%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLP 366
+G A+K +K V+ + T + + LV+L+ + + L +V EY+P
Sbjct: 58 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 117
Query: 367 NGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAE 426
G + L S + IVL YLH +I+RD+K N+L+D +
Sbjct: 118 GGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLHS---LDLIYRDLKPENLLIDQQ 170
Query: 427 FNAKLGDF--------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
++ DF GT YLAPE + S ++ D ++ GV+ E+AAG P
Sbjct: 171 GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
Query: 479 VDNDGCVIV 487
D + +
Sbjct: 231 FFADQPIQI 239
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 36/221 (16%)
Query: 286 FNKNRIVGEGASATVY-KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F + + +G G+ V + +G A+K +K V+ + T + +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNS----------SSSIVLSWEKRLNIVL 394
LV+L+ + + L +V EY+P G + L ++ IVL++E
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE------- 156
Query: 395 GVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYL 446
YLH +I+RD+K N+L+D + ++ DF GT YL
Sbjct: 157 -------YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYL 206
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
APE + S ++ D ++ GV+ E+AAG P D + +
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 83/211 (39%), Gaps = 36/211 (17%)
Query: 290 RIVGEGASATVYKGSL------PSGGAVAVKRFEKPNRVECARNP---FTTEFATMAGCL 340
R +G GA VY+G + PS VAVK + C+ F E A +
Sbjct: 54 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLME-ALIISKF 108
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNN---SSSSIVLSWEKRLNIVLGVA 397
H+N+V+ G + ++ E + G L L S L+ L++ +A
Sbjct: 109 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 168
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFN---AKLGDFEATIPAGTMGY--------- 445
YL E IHRD+ A N LL AK+GDF GY
Sbjct: 169 CGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML 225
Query: 446 ----LAPEYVYSGVPSEKTDVYSFGVVALEV 472
+ PE G+ + KTD +SFGV+ E+
Sbjct: 226 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 256
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 15/189 (7%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLP 366
+G A+K +K V+ + T + + LV+L+ + + L +V EY+P
Sbjct: 65 TGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVP 124
Query: 367 NGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAE 426
G + L S + IVL YLH +I+RD+K N+L+D +
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLHS---LDLIYRDLKPENLLIDQQ 177
Query: 427 FNAKLGDF--------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
++ DF GT YLAPE + S ++ D ++ GV+ E+AAG P
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 479 VDNDGCVIV 487
D + +
Sbjct: 238 FFADQPIQI 246
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 15/189 (7%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLP 366
+G A+K +K V+ + T + + LV+L+ + + L +V EY+P
Sbjct: 65 TGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVP 124
Query: 367 NGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAE 426
G + L S + IVL YLH +I+RD+K N+L+D +
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLHS---LDLIYRDLKPENLLIDQQ 177
Query: 427 FNAKLGDF--------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
++ DF GT YLAPE + S ++ D ++ GV+ E+AAG P
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 479 VDNDGCVIV 487
D + +
Sbjct: 238 FFADQPIQI 246
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 15/189 (7%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLP 366
+G A+K +K V+ + T + + LV+L+ + + L +V EY+P
Sbjct: 65 TGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVP 124
Query: 367 NGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAE 426
G + L S + IVL YLH +I+RD+K N+L+D +
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLHS---LDLIYRDLKPENLLIDQQ 177
Query: 427 FNAKLGDF--------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
++ DF GT YLAPE + S ++ D ++ GV+ E+AAG P
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 479 VDNDGCVIV 487
D + +
Sbjct: 238 FFADQPIQI 246
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 36/221 (16%)
Query: 286 FNKNRIVGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F + + +G G+ V + +G A+K +K V+ + T + +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNS----------SSSIVLSWEKRLNIVL 394
LV+L+ + + L +V EY+P G + L ++ IVL++E
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE------- 155
Query: 395 GVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYL 446
YLH +I+RD+K N+L+D + ++ DF GT YL
Sbjct: 156 -------YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYL 205
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
APE + S ++ D ++ GV+ E+AAG P D + +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 83/211 (39%), Gaps = 36/211 (17%)
Query: 290 RIVGEGASATVYKGSL------PSGGAVAVKRFEKPNRVECARNP---FTTEFATMAGCL 340
R +G GA VY+G + PS VAVK + C+ F E A +
Sbjct: 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLME-ALIISKF 131
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNN---SSSSIVLSWEKRLNIVLGVA 397
H+N+V+ G + ++ E + G L L S L+ L++ +A
Sbjct: 132 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 191
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFN---AKLGDFEATIPAGTMGY--------- 445
YL E IHRD+ A N LL AK+GDF GY
Sbjct: 192 CGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML 248
Query: 446 ----LAPEYVYSGVPSEKTDVYSFGVVALEV 472
+ PE G+ + KTD +SFGV+ E+
Sbjct: 249 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 279
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 25/203 (12%)
Query: 291 IVGEGA-SATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQ 349
++G GA S + + VA+K K +E E A + ++H N+V L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAK-KALEGKEGSMENEIAVLHK-IKHPNIVALD 82
Query: 350 GWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
G L L+ + + G L D+I+ + S ++ V A+ YLH+
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----RLIFQVLDAVKYLHD--- 134
Query: 409 RQIIHRDVKACNIL---LDAEFNAKLGDFEAT----------IPAGTMGYLAPEYVYSGV 455
I+HRD+K N+L LD + + DF + GT GY+APE +
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 456 PSEKTDVYSFGVVALEVAAGKSP 478
S+ D +S GV+A + G P
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 15/189 (7%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLP 366
+G A+K +K V+ + T + + LV+L+ + + L +V EY+P
Sbjct: 66 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
Query: 367 NGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAE 426
G + L S + IVL YLH +I+RD+K N+L+D +
Sbjct: 126 GGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLHS---LDLIYRDLKPENLLIDQQ 178
Query: 427 FNAKLGDF--------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
++ DF GT YLAPE + S ++ D ++ GV+ E+AAG P
Sbjct: 179 GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 479 VDNDGCVIV 487
D + +
Sbjct: 239 FFADQPIQI 247
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 97/248 (39%), Gaps = 30/248 (12%)
Query: 286 FNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
F K + A Y + A+ K+ EK + RN + ++H L
Sbjct: 51 FGKVLLARHKAEEVFYAVKVLQKKAILKKKEEK--HIMSERN-------VLLKNVKHPFL 101
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
V L ++L V +Y+ G L ++ L R +ASAL YLH
Sbjct: 102 VGLHFSFQTADKLYFVLDYINGGEL---FYHLQRERCFLEPRARF-YAAEIASALGYLHS 157
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAPEYVYSG 454
I++RD+K NILLD++ + L DF + GT YLAPE ++
Sbjct: 158 ---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQ 214
Query: 455 VPSEKTDVYSFGVVALEVAAGKSPV-DNDGCVIVDWVWN--LRKKGKLLDAADFRLRGKF 511
D + G V E+ G P + + D + N L+ K + ++A L G
Sbjct: 215 PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLL 274
Query: 512 NRKEMERM 519
+ +R+
Sbjct: 275 QKDRTKRL 282
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 15/189 (7%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLP 366
+G A+K +K V+ + T + + LV+L+ + + L +V EY+P
Sbjct: 66 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
Query: 367 NGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAE 426
G + L S + IVL YLH +I+RD+K N+L+D +
Sbjct: 126 GGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLHS---LDLIYRDLKPENLLIDQQ 178
Query: 427 FNAKLGDF--------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
++ DF GT YLAPE + S ++ D ++ GV+ E+AAG P
Sbjct: 179 GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 479 VDNDGCVIV 487
D + +
Sbjct: 239 FFADQPIQI 247
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 36/221 (16%)
Query: 286 FNKNRIVGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F + + +G G+ V + +G A+K +K V+ + T + +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNS----------SSSIVLSWEKRLNIVL 394
LV+L+ + + L +V EY+P G + L ++ IVL++E
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE------- 155
Query: 395 GVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYL 446
YLH +I+RD+K N+L+D + ++ DF GT YL
Sbjct: 156 -------YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYL 205
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
APE + S ++ D ++ GV+ E+AAG P D + +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 25/203 (12%)
Query: 291 IVGEGA-SATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQ 349
++G GA S + + VA+K K +E E A + ++H N+V L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAK-EALEGKEGSMENEIAVLHK-IKHPNIVALD 82
Query: 350 GWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECE 408
G L L+ + + G L D+I+ + S ++ V A+ YLH+
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----RLIFQVLDAVKYLHD--- 134
Query: 409 RQIIHRDVKACNIL---LDAEFNAKLGDF----------EATIPAGTMGYLAPEYVYSGV 455
I+HRD+K N+L LD + + DF + GT GY+APE +
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 456 PSEKTDVYSFGVVALEVAAGKSP 478
S+ D +S GV+A + G P
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 15/189 (7%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLP 366
+G A+K +K V+ + T + + LV+L+ + + L +V EY+P
Sbjct: 86 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 145
Query: 367 NGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAE 426
G + L S + IVL YLH +I+RD+K N+L+D +
Sbjct: 146 GGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLHS---LDLIYRDLKPENLLIDQQ 198
Query: 427 FNAKLGDF--------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
++ DF GT YLAPE + S ++ D ++ GV+ E+AAG P
Sbjct: 199 GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
Query: 479 VDNDGCVIV 487
D + +
Sbjct: 259 FFADQPIQI 267
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 26/209 (12%)
Query: 286 FNKNRIVGEGASATVY--KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
+ R++G+G+ V K + +G AVK K + + L H
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 109
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
N+++L + + LV E G L D+I+ S + + I+ V S ++Y
Sbjct: 110 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSGITY 164
Query: 403 LHEECERQIIHRDVKACNILLDA---EFNAKLGD------FEATIPA----GTMGYLAPE 449
+H+ +I+HRD+K N+LL++ + N ++ D FEA+ GT Y+APE
Sbjct: 165 MHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPE 221
Query: 450 YVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
V G EK DV+S GV+ + +G P
Sbjct: 222 -VLHGTYDEKCDVWSTGVILYILLSGCPP 249
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 15/189 (7%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLP 366
+G A+K +K V+ + T + + LV+L+ + + L +V EY+P
Sbjct: 66 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
Query: 367 NGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAE 426
G + L S + IVL YLH +I+RD+K N+L+D +
Sbjct: 126 GGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLHS---LDLIYRDLKPENLLIDQQ 178
Query: 427 FNAKLGDF--------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
++ DF GT YLAPE + S ++ D ++ GV+ E+AAG P
Sbjct: 179 GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 479 VDNDGCVIV 487
D + +
Sbjct: 239 FFADQPIQI 247
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 26/209 (12%)
Query: 286 FNKNRIVGEGASATVY--KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
+ R++G+G+ V K + +G AVK K + + L H
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 110
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
N+++L + + LV E G L D+I+ S + + I+ V S ++Y
Sbjct: 111 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSGITY 165
Query: 403 LHEECERQIIHRDVKACNILLDA---EFNAKLGD------FEATIPA----GTMGYLAPE 449
+H+ +I+HRD+K N+LL++ + N ++ D FEA+ GT Y+APE
Sbjct: 166 MHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPE 222
Query: 450 YVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
V G EK DV+S GV+ + +G P
Sbjct: 223 -VLHGTYDEKCDVWSTGVILYILLSGCPP 250
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVY-KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F + + +G G+ V + +G A+K +K V+ + T + +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY P G + L S + IVL YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+++D + ++ DF GT YLAPE + S
Sbjct: 159 S---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F++ + +G G+ V SG A+K +K V+ + T + +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY+ G + L S + IVL YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+L+D + ++ DF AGT YLAPE + S
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGY 215
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 116/290 (40%), Gaps = 56/290 (19%)
Query: 293 GEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWC 352
G+ AT + +G + K N +EF + + H ++++L G C
Sbjct: 37 GKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ-VNHPHVIKLYGAC 95
Query: 353 CEGNELVLVYEYLPNGSLDKILHN--------------------NSSSSIVLSWEKRLNI 392
+ L+L+ EY GSL L + L+ ++
Sbjct: 96 SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISF 155
Query: 393 VLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF----------------EA 436
++ + YL E +++HRD+ A NIL+ K+ DF +
Sbjct: 156 AWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQG 212
Query: 437 TIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALE-VAAGKSPVDNDGCVIVDWVWNLRK 495
IP + ++A E ++ + + ++DV+SFGV+ E V G +P + + ++NL K
Sbjct: 213 RIP---VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG---IPPERLFNLLK 266
Query: 496 KGKLLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILK 545
G ++ D +EM R++ L C +KRP + ++ L+
Sbjct: 267 TGHRMERPD------NCSEEMYRLM---LQCWKQEPDKRPVFADISKDLE 307
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 116/290 (40%), Gaps = 56/290 (19%)
Query: 293 GEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWC 352
G+ AT + +G + K N +EF + + H ++++L G C
Sbjct: 37 GKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ-VNHPHVIKLYGAC 95
Query: 353 CEGNELVLVYEYLPNGSLDKILHN--------------------NSSSSIVLSWEKRLNI 392
+ L+L+ EY GSL L + L+ ++
Sbjct: 96 SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISF 155
Query: 393 VLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF----------------EA 436
++ + YL E +++HRD+ A NIL+ K+ DF +
Sbjct: 156 AWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQG 212
Query: 437 TIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALE-VAAGKSPVDNDGCVIVDWVWNLRK 495
IP + ++A E ++ + + ++DV+SFGV+ E V G +P + + ++NL K
Sbjct: 213 RIP---VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG---IPPERLFNLLK 266
Query: 496 KGKLLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILK 545
G ++ D +EM R++ L C +KRP + ++ L+
Sbjct: 267 TGHRMERPD------NCSEEMYRLM---LQCWKQEPDKRPVFADISKDLE 307
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 359 VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKA 418
+L EY G L K L N + L ++ ++SAL YLHE +IIHRD+K
Sbjct: 95 LLAMEYCEGGDLRKYL-NQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKP 150
Query: 419 CNILL------------DAEFNAKLGDFE-ATIPAGTMGYLAPEYVYSGVPSEKTDVYSF 465
NI+L D + +L E T GT+ YLAPE + + D +SF
Sbjct: 151 ENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSF 210
Query: 466 GVVALEVAAGKSP 478
G +A E G P
Sbjct: 211 GTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 359 VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKA 418
+L EY G L K L N + L ++ ++SAL YLHE +IIHRD+K
Sbjct: 94 LLAMEYCEGGDLRKYL-NQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKP 149
Query: 419 CNILL------------DAEFNAKLGDFE-ATIPAGTMGYLAPEYVYSGVPSEKTDVYSF 465
NI+L D + +L E T GT+ YLAPE + + D +SF
Sbjct: 150 ENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSF 209
Query: 466 GVVALEVAAGKSP 478
G +A E G P
Sbjct: 210 GTLAFECITGFRP 222
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 36/221 (16%)
Query: 286 FNKNRIVGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F + + +G G+ V + +G A+K +K V+ + T + +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNS----------SSSIVLSWEKRLNIVL 394
LV+L+ + + L +V EY P G + L ++ IVL++E
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE------- 155
Query: 395 GVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYL 446
YLH +I+RD+K N+++D + K+ DF GT YL
Sbjct: 156 -------YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYL 205
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
APE + S ++ D ++ GV+ E+AAG P D + +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F + + +G G+ V + +G A+K +K V+ + T + +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
L +L+ + + L +V EY P G + L S + IVL YLH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 159
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+++D + K+ DF GT YLAPE + S
Sbjct: 160 S---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVY-KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F + + +G G+ V + +G A+K +K V+ + T + +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
L +L+ + + L +V EY P G + L S + IVL YLH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 159
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+++D + K+ DF GT YLAPE + S
Sbjct: 160 S---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 88/199 (44%), Gaps = 25/199 (12%)
Query: 290 RIVGEGASATVYKGSLPS----GGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
R +GEG V++G S AVA+K K + R F E TM H ++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDSVREKFLQEALTMRQ-FDHPHI 73
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
V+L G E N + ++ E G L L S L + +++AL+YL
Sbjct: 74 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFS---LDLASLILYAYQLSTALAYLES 129
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF-------EATIPAGTMG-----YLAPEYVYS 453
++ +HRD+ A N+L+ A KLGDF ++T + G ++APE +
Sbjct: 130 ---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 454 GVPSEKTDVYSFGVVALEV 472
+ +DV+ FGV E+
Sbjct: 187 RRFTSASDVWMFGVCMWEI 205
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 80/189 (42%), Gaps = 15/189 (7%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLP 366
+G A+K +K V+ + T + + LV+L+ + + L +V EY P
Sbjct: 66 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAP 125
Query: 367 NGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAE 426
G + L S + IVL YLH +I+RD+K N+++D +
Sbjct: 126 GGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLHS---LDLIYRDLKPENLMIDQQ 178
Query: 427 FNAKLGDF--------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
K+ DF GT YLAPE + S ++ D ++ GV+ E+AAG P
Sbjct: 179 GYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 479 VDNDGCVIV 487
D + +
Sbjct: 239 FFADQPIQI 247
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 32/161 (19%)
Query: 337 AGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
A L +N V+ + + L + EY N +L ++H S ++ ++ + +
Sbjct: 69 AAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIH---SENLNQQRDEYWRLFRQI 125
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------------------- 434
ALSY+H + IIHR++K NI +D N K+GDF
Sbjct: 126 LEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 435 ---EATIPAGTMGYLAPEYVY-SGVPSEKTDVYSFGVVALE 471
T GT Y+A E + +G +EK D YS G++ E
Sbjct: 183 SSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 23/175 (13%)
Query: 318 KPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHN 376
+ V + N E + L H N+++L + + LV E G L D+I+H
Sbjct: 71 RKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHR 130
Query: 377 NSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDA-EFNA--KLGD 433
+ + + I+ V S ++YLH+ I+HRD+K N+LL++ E +A K+ D
Sbjct: 131 MKFNEVDAAV-----IIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVD 182
Query: 434 F----------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
F + GT Y+APE V EK DV+S GV+ + AG P
Sbjct: 183 FGLSAVFENQKKMKERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAGYPP 236
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 23/153 (15%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLG-VA 397
++H+N+V L+ LV + + G L D+IL + EK ++V+ V
Sbjct: 63 IKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYT------EKDASLVIQQVL 116
Query: 398 SALSYLHEECERQIIHRDVKACNIL-LDAEFNAKL--GDFE---------ATIPAGTMGY 445
SA+ YLHE I+HRD+K N+L L E N+K+ DF + GT GY
Sbjct: 117 SAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGY 173
Query: 446 LAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
+APE + S+ D +S GV+ + G P
Sbjct: 174 VAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 42/214 (19%)
Query: 290 RIVGEGASATVYKGSL------PSGGAVAVKRFEKPNRVECARNP---FTTEFATMAGCL 340
R +G GA VY+G + PS VAVK + C+ F E A +
Sbjct: 28 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLME-ALIISKF 82
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNN---SSSSIVLSWEKRLNIVLGVA 397
H+N+V+ G + ++ E + G L L S L+ L++ +A
Sbjct: 83 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 142
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFN---AKLGDFE----------------ATI 438
YL E IHRD+ A N LL AK+GDF A +
Sbjct: 143 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 199
Query: 439 PAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEV 472
P + ++ PE G+ + KTD +SFGV+ E+
Sbjct: 200 P---VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 230
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 118/298 (39%), Gaps = 61/298 (20%)
Query: 290 RIVGEGASATVYKGSL-----PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
+ +GEG V K + +G + K N +EF + + H +
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ-VNHPH 87
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHN--------------------NSSSSIVL 384
+++L G C + L+L+ EY GSL L + L
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 385 SWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------- 434
+ ++ ++ + YL E ++HRD+ A NIL+ K+ DF
Sbjct: 148 TMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 435 ------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALE-VAAGKSPVDNDGCVIV 487
+ IP + ++A E ++ + + ++DV+SFGV+ E V G +P +
Sbjct: 205 SXVKRSQGRIP---VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG---IPP 258
Query: 488 DWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARILK 545
+ ++NL K G ++ D +EM R++ L C +KRP + ++ L+
Sbjct: 259 ERLFNLLKTGHRMERPD------NCSEEMYRLM---LQCWKQEPDKRPVFADISKDLE 307
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 42/214 (19%)
Query: 290 RIVGEGASATVYKGSL------PSGGAVAVKRFEKPNRVECARNP---FTTEFATMAGCL 340
R +G GA VY+G + PS VAVK + C+ F E A +
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLME-ALIISKF 91
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNN---SSSSIVLSWEKRLNIVLGVA 397
H+N+V+ G + ++ E + G L L S L+ L++ +A
Sbjct: 92 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFN---AKLGDFE----------------ATI 438
YL E IHRD+ A N LL AK+GDF A +
Sbjct: 152 CGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAML 208
Query: 439 PAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEV 472
P + ++ PE G+ + KTD +SFGV+ E+
Sbjct: 209 P---VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 26/150 (17%)
Query: 340 LRHKNLVQLQGWCCEGN---ELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
L H+++V+ +G CCE + LV EY+P GSL L + L L +
Sbjct: 68 LYHEHIVKYKG-CCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----LLFAQQI 121
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF--EATIPAGTMGY--------- 445
++YLH + IHR + A N+LLD + K+GDF +P G Y
Sbjct: 122 CEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 178
Query: 446 ---LAPEYVYSGVPSEKTDVYSFGVVALEV 472
APE + +DV+SFGV E+
Sbjct: 179 VFWYAPECLKECKFYYASDVWSFGVTLYEL 208
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F + + +G G+ V + +G A+K +K V+ T + +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY P G + L S + IVL YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+++D + ++ DF GT YLAPE + S
Sbjct: 159 S---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 286 FNKNRIVGEGASATVYK------GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGC 339
+ + R +G+G A Y+ + +G V KP++ E +TE A +
Sbjct: 28 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE----KMSTEIA-IHKS 82
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
L + ++V G+ + + + +V E SL L + V E R +
Sbjct: 83 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSL---LELHKRRKAVTEPEARY-FMRQTIQG 138
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIP-----------AGTMGYLAP 448
+ YLH ++IHRD+K N+ L+ + + K+GDF GT Y+AP
Sbjct: 139 VQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAP 195
Query: 449 EYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
E + S + D++S G + + GK P +
Sbjct: 196 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 228
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 26/150 (17%)
Query: 340 LRHKNLVQLQGWCCEGN---ELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
L H+++V+ +G CCE + LV EY+P GSL L + L L +
Sbjct: 67 LYHEHIVKYKG-CCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----LLFAQQI 120
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF--EATIPAGTMGY--------- 445
++YLH + IHR + A N+LLD + K+GDF +P G Y
Sbjct: 121 CEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 177
Query: 446 ---LAPEYVYSGVPSEKTDVYSFGVVALEV 472
APE + +DV+SFGV E+
Sbjct: 178 VFWYAPECLKECKFYYASDVWSFGVTLYEL 207
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 42/214 (19%)
Query: 290 RIVGEGASATVYKGSL------PSGGAVAVKRFEKPNRVECARNP---FTTEFATMAGCL 340
R +G GA VY+G + PS VAVK + C+ F E A +
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLME-ALIISKF 91
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNN---SSSSIVLSWEKRLNIVLGVA 397
H+N+V+ G + ++ E + G L L S L+ L++ +A
Sbjct: 92 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFN---AKLGDFE----------------ATI 438
YL E IHRD+ A N LL AK+GDF A +
Sbjct: 152 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 208
Query: 439 PAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEV 472
P + ++ PE G+ + KTD +SFGV+ E+
Sbjct: 209 P---VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 42/214 (19%)
Query: 290 RIVGEGASATVYKGSL------PSGGAVAVKRFEKPNRVECARNP---FTTEFATMAGCL 340
R +G GA VY+G + PS VAVK + C+ F E A +
Sbjct: 43 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLME-ALIISKF 97
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNN---SSSSIVLSWEKRLNIVLGVA 397
H+N+V+ G + ++ E + G L L S L+ L++ +A
Sbjct: 98 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 157
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFN---AKLGDFE----------------ATI 438
YL E IHRD+ A N LL AK+GDF A +
Sbjct: 158 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 214
Query: 439 PAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEV 472
P + ++ PE G+ + KTD +SFGV+ E+
Sbjct: 215 P---VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 245
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 25/199 (12%)
Query: 290 RIVGEGASATVYKGSLPS----GGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
R +GEG V++G S AVA+K K + R F E TM H ++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDSVREKFLQEALTMRQ-FDHPHI 73
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
V+L G E N + ++ E G L L S L + +++AL+YL
Sbjct: 74 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFS---LDLASLILYAYQLSTALAYLES 129
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF-------EATIPAGTMG-----YLAPEYVYS 453
++ +HRD+ A N+L+ + KLGDF ++T + G ++APE +
Sbjct: 130 ---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINF 186
Query: 454 GVPSEKTDVYSFGVVALEV 472
+ +DV+ FGV E+
Sbjct: 187 RRFTSASDVWMFGVCMWEI 205
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 18/153 (11%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
L H+++V G+ + + + +V E SL ++ + + + IVLG
Sbjct: 78 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC--- 134
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAP 448
YLH ++IHRD+K N+ L+ + K+GDF GT Y+AP
Sbjct: 135 -QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAP 190
Query: 449 EYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
E + S + DV+S G + + GK P +
Sbjct: 191 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 223
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 92/222 (41%), Gaps = 43/222 (19%)
Query: 280 KQATLGFNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGC 339
K+ + F + ++G G V+K G V + K N + R E +A
Sbjct: 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER-----EVKALAK- 60
Query: 340 LRHKNLVQLQGWCCEGNE-----------------LVLVYEYLPNGSLDKILHNNSSSSI 382
L H N+V G C +G + L + E+ G+L++ + +
Sbjct: 61 LDHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 119
Query: 383 --VLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF------ 434
VL+ E I GV Y+H +++I+RD+K NI L K+GDF
Sbjct: 120 DKVLALELFEQITKGV----DYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSL 172
Query: 435 ----EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEV 472
+ GT+ Y++PE + S ++ D+Y+ G++ E+
Sbjct: 173 KNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 85/211 (40%), Gaps = 36/211 (17%)
Query: 290 RIVGEGASATVYKGSL------PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
R +G GA VY+G + PS VAVK + E F E A + H+
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VYSEQDELDFLME-ALIISKFNHQ 108
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNN---SSSSIVLSWEKRLNIVLGVASAL 400
N+V+ G + ++ E + G L L S L+ L++ +A
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 401 SYLHEECERQIIHRDVKACNILLDAEFN---AKLGDFE----------------ATIPAG 441
YL E IHRD+ A N LL AK+GDF A +P
Sbjct: 169 QYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP-- 223
Query: 442 TMGYLAPEYVYSGVPSEKTDVYSFGVVALEV 472
+ ++ PE G+ + KTD +SFGV+ E+
Sbjct: 224 -VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 18/153 (11%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
L H+++V G+ + + + +V E SL ++ + + + IVLG
Sbjct: 74 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC--- 130
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAP 448
YLH ++IHRD+K N+ L+ + K+GDF GT Y+AP
Sbjct: 131 -QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAP 186
Query: 449 EYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
E + S + DV+S G + + GK P +
Sbjct: 187 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 219
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 42/214 (19%)
Query: 290 RIVGEGASATVYKGSL------PSGGAVAVKRFEKPNRVECARNP---FTTEFATMAGCL 340
R +G GA VY+G + PS VAVK + C+ F E A +
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLME-ALIISKF 105
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNN---SSSSIVLSWEKRLNIVLGVA 397
H+N+V+ G + ++ E + G L L S L+ L++ +A
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFN---AKLGDFE----------------ATI 438
YL E IHRD+ A N LL AK+GDF A +
Sbjct: 166 CGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 222
Query: 439 PAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEV 472
P + ++ PE G+ + KTD +SFGV+ E+
Sbjct: 223 P---VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 28/216 (12%)
Query: 278 DIKQATLGFNKNRIVGEGA-SATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATM 336
DIK+ F +G GA S V +G AVK K ++ + E A +
Sbjct: 19 DIKKI---FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPK-KALKGKESSIENEIAVL 74
Query: 337 AGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLG 395
++H+N+V L+ N L LV + + G L D+I+ + S ++
Sbjct: 75 RK-IKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAS-----TLIRQ 128
Query: 396 VASALSYLHEECERQIIHRDVKACNILL---DAEFNAKLGDFE----------ATIPAGT 442
V A+ YLH I+HRD+K N+L D E + DF + GT
Sbjct: 129 VLDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGT 185
Query: 443 MGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
GY+APE + S+ D +S GV+A + G P
Sbjct: 186 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 42/214 (19%)
Query: 290 RIVGEGASATVYKGSL------PSGGAVAVKRFEKPNRVECARNP---FTTEFATMAGCL 340
R +G GA VY+G + PS VAVK + C+ F E A +
Sbjct: 53 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLME-ALIISKF 107
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNN---SSSSIVLSWEKRLNIVLGVA 397
H+N+V+ G + ++ E + G L L S L+ L++ +A
Sbjct: 108 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 167
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFN---AKLGDFE----------------ATI 438
YL E IHRD+ A N LL AK+GDF A +
Sbjct: 168 CGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 224
Query: 439 PAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEV 472
P + ++ PE G+ + KTD +SFGV+ E+
Sbjct: 225 P---VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 255
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 42/214 (19%)
Query: 290 RIVGEGASATVYKGSL------PSGGAVAVKRFEKPNRVECARNP---FTTEFATMAGCL 340
R +G GA VY+G + PS VAVK + C+ F E A +
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLME-ALIISKF 90
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNN---SSSSIVLSWEKRLNIVLGVA 397
H+N+V+ G + ++ E + G L L S L+ L++ +A
Sbjct: 91 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 150
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFN---AKLGDFE----------------ATI 438
YL E IHRD+ A N LL AK+GDF A +
Sbjct: 151 CGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 207
Query: 439 PAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEV 472
P + ++ PE G+ + KTD +SFGV+ E+
Sbjct: 208 P---VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 18/153 (11%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
L H+++V G+ + + + +V E SL ++ + + + IVLG
Sbjct: 74 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC--- 130
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAP 448
YLH ++IHRD+K N+ L+ + K+GDF GT Y+AP
Sbjct: 131 -QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAP 186
Query: 449 EYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
E + S + DV+S G + + GK P +
Sbjct: 187 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 219
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 88/199 (44%), Gaps = 25/199 (12%)
Query: 290 RIVGEGASATVYKGSLPS----GGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
R +GEG V++G S AVA+K K + R F E TM H ++
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDSVREKFLQEALTMRQ-FDHPHI 453
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
V+L G E N + ++ E G L L S L + +++AL+YL
Sbjct: 454 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFS---LDLASLILYAYQLSTALAYLES 509
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF-------EATIPAGTMG-----YLAPEYVYS 453
++ +HRD+ A N+L+ A KLGDF ++T + G ++APE +
Sbjct: 510 ---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 566
Query: 454 GVPSEKTDVYSFGVVALEV 472
+ +DV+ FGV E+
Sbjct: 567 RRFTSASDVWMFGVCMWEI 585
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 22/141 (15%)
Query: 353 CEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQII 412
CE +LV E G L+K L N + + +V V+ + YL E +
Sbjct: 81 CEAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEES---NFV 133
Query: 413 HRDVKACNILLDAEFNAKLGDF---------EATIPAGTMG-----YLAPEYVYSGVPSE 458
HRD+ A N+LL + AK+ DF E A T G + APE + S
Sbjct: 134 HRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSS 193
Query: 459 KTDVYSFGVVALEV-AAGKSP 478
K+DV+SFGV+ E + G+ P
Sbjct: 194 KSDVWSFGVLMWEAFSYGQKP 214
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 42/214 (19%)
Query: 290 RIVGEGASATVYKGSL------PSGGAVAVKRFEKPNRVECARNP---FTTEFATMAGCL 340
R +G GA VY+G + PS VAVK + C+ F E A +
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLME-ALIISKF 90
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNN---SSSSIVLSWEKRLNIVLGVA 397
H+N+V+ G + ++ E + G L L S L+ L++ +A
Sbjct: 91 NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 150
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFN---AKLGDFE----------------ATI 438
YL E IHRD+ A N LL AK+GDF A +
Sbjct: 151 CGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 207
Query: 439 PAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEV 472
P + ++ PE G+ + KTD +SFGV+ E+
Sbjct: 208 P---VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 35/227 (15%)
Query: 273 RLALTDIKQATLGFNKNRIVGEGASATVYKGSLPSGGAV-AVKRFEKP-----NRVECAR 326
R+ LTD FN ++G+G+ V + A+K +K + VEC
Sbjct: 15 RVKLTD-------FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECT- 66
Query: 327 NPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSW 386
E +A + L QL + L V EY+ G L + H
Sbjct: 67 ---MVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL--MYHIQQVGK--FKE 119
Query: 387 EKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF----EATIPA-- 440
+ + ++ L +LH+ R II+RD+K N++LD+E + K+ DF E +
Sbjct: 120 PQAVFYAAEISIGLFFLHK---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVT 176
Query: 441 -----GTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
GT Y+APE + + D +++GV+ E+ AG+ P D +
Sbjct: 177 TREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGE 223
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 42/214 (19%)
Query: 290 RIVGEGASATVYKGSL------PSGGAVAVKRFEKPNRVECARNP---FTTEFATMAGCL 340
R +G GA VY+G + PS VAVK + C+ F E A +
Sbjct: 63 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLME-ALIISKF 117
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNN---SSSSIVLSWEKRLNIVLGVA 397
H+N+V+ G + ++ E + G L L S L+ L++ +A
Sbjct: 118 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 177
Query: 398 SALSYLHEECERQIIHRDVKACNILLDAEFN---AKLGDFE----------------ATI 438
YL E IHRD+ A N LL AK+GDF A +
Sbjct: 178 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 234
Query: 439 PAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEV 472
P + ++ PE G+ + KTD +SFGV+ E+
Sbjct: 235 P---VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 265
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 35/199 (17%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLP 366
+G A+K +K V+ + T + + LV+L+ + + L +V EY+P
Sbjct: 58 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 117
Query: 367 NGSLDKILHNNS----------SSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDV 416
G + L ++ IVL++E YLH +I+RD+
Sbjct: 118 GGEMFSHLRRIGRFXEPHARFYAAQIVLTFE--------------YLHS---LDLIYRDL 160
Query: 417 KACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVV 468
K N+L+D + ++ DF GT YLAPE + S ++ D ++ GV+
Sbjct: 161 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 220
Query: 469 ALEVAAGKSPVDNDGCVIV 487
E+AAG P D + +
Sbjct: 221 IYEMAAGYPPFFADQPIQI 239
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 286 FNKNRIVGEGASATVYK------GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGC 339
+ + R +G+G A Y+ + +G V KP++ E +TE A +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE----KMSTEIA-IHKS 98
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
L + ++V G+ + + + +V E SL L + V E R +
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSL---LELHKRRKAVTEPEARY-FMRQTIQG 154
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAP 448
+ YLH ++IHRD+K N+ L+ + + K+GDF GT Y+AP
Sbjct: 155 VQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAP 211
Query: 449 EYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
E + S + D++S G + + GK P +
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 244
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 286 FNKNRIVGEGASATVYK------GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGC 339
+ + R +G+G A Y+ + +G V KP++ E +TE A +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE----KMSTEIA-IHKS 98
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
L + ++V G+ + + + +V E SL L + V E R +
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSL---LELHKRRKAVTEPEARY-FMRQTIQG 154
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAP 448
+ YLH ++IHRD+K N+ L+ + + K+GDF GT Y+AP
Sbjct: 155 VQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAP 211
Query: 449 EYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
E + S + D++S G + + GK P +
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 244
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 21/207 (10%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
+ K +GEG TV+K + + VA+KR + E + E + L+HKN
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKE-LKHKN 62
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+V+L +L LV+E+ + L K S + L E + + + L + H
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFC-DQDLKKYF---DSCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVY- 452
R ++HRD+K N+L++ KL DF G T+ Y P+ ++
Sbjct: 119 S---RNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG 175
Query: 453 SGVPSEKTDVYSFGVVALEVAAGKSPV 479
+ + S D++S G + E+A P+
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 64/141 (45%), Gaps = 22/141 (15%)
Query: 353 CEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQII 412
CE +LV E G L+K L N + + + +V V+ + YL E +
Sbjct: 439 CEAESWMLVMEMAELGPLNKYLQQNRH----VKDKNIIELVHQVSMGMKYLEES---NFV 491
Query: 413 HRDVKACNILLDAEFNAKLGDF---------EATIPAGTMG-----YLAPEYVYSGVPSE 458
HRD+ A N+LL + AK+ DF E A T G + APE + S
Sbjct: 492 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 551
Query: 459 KTDVYSFGVVALEV-AAGKSP 478
K+DV+SFGV+ E + G+ P
Sbjct: 552 KSDVWSFGVLMWEAFSYGQKP 572
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 286 FNKNRIVGEGASATVYK------GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGC 339
+ + R +G+G A Y+ + +G V KP++ E +TE A +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE----KMSTEIA-IHKS 98
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
L + ++V G+ + + + +V E SL L + V E R +
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSL---LELHKRRKAVTEPEARY-FMRQTIQG 154
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIP-----------AGTMGYLAP 448
+ YLH ++IHRD+K N+ L+ + + K+GDF GT Y+AP
Sbjct: 155 VQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAP 211
Query: 449 EYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
E + S + D++S G + + GK P +
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 244
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 64/141 (45%), Gaps = 22/141 (15%)
Query: 353 CEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQII 412
CE +LV E G L+K L N + + + +V V+ + YL E +
Sbjct: 440 CEAESWMLVMEMAELGPLNKYLQQNRH----VKDKNIIELVHQVSMGMKYLEES---NFV 492
Query: 413 HRDVKACNILLDAEFNAKLGDF---------EATIPAGTMG-----YLAPEYVYSGVPSE 458
HRD+ A N+LL + AK+ DF E A T G + APE + S
Sbjct: 493 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 552
Query: 459 KTDVYSFGVVALEV-AAGKSP 478
K+DV+SFGV+ E + G+ P
Sbjct: 553 KSDVWSFGVLMWEAFSYGQKP 573
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 25/199 (12%)
Query: 290 RIVGEGASATVYKGSLPS----GGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
R +GEG V++G S AVA+K K + R F E TM H ++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDSVREKFLQEALTMRQ-FDHPHI 73
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
V+L G E N + ++ E G L L S L + +++AL+YL
Sbjct: 74 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLES 129
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF-------EATIPAGTMG-----YLAPEYVYS 453
++ +HRD+ A N+L+ + KLGDF ++T + G ++APE +
Sbjct: 130 ---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 454 GVPSEKTDVYSFGVVALEV 472
+ +DV+ FGV E+
Sbjct: 187 RRFTSASDVWMFGVCMWEI 205
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 23/160 (14%)
Query: 334 ATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIV 393
A + L + +V++ G CE +LV E G L+K L N + + +V
Sbjct: 79 ANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELV 133
Query: 394 LGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGTMG 444
V+ + YL E +HRD+ A N+LL + AK+ DF E A T G
Sbjct: 134 HQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 190
Query: 445 -----YLAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSP 478
+ APE + S K+DV+SFGV+ E + G+ P
Sbjct: 191 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 23/160 (14%)
Query: 334 ATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIV 393
A + L + +V++ G CE +LV E G L+K L N + + +V
Sbjct: 79 ANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELV 133
Query: 394 LGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---------EATIPAGTMG 444
V+ + YL E +HRD+ A N+LL + AK+ DF E A T G
Sbjct: 134 HQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 190
Query: 445 -----YLAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSP 478
+ APE + S K+DV+SFGV+ E + G+ P
Sbjct: 191 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 22/141 (15%)
Query: 353 CEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQII 412
CE +LV E G L+K L N + + +V V+ + YL E +
Sbjct: 75 CEAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEES---NFV 127
Query: 413 HRDVKACNILLDAEFNAKLGDF---------EATIPAGTMG-----YLAPEYVYSGVPSE 458
HRD+ A N+LL + AK+ DF E A T G + APE + S
Sbjct: 128 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 187
Query: 459 KTDVYSFGVVALEV-AAGKSP 478
K+DV+SFGV+ E + G+ P
Sbjct: 188 KSDVWSFGVLMWEAFSYGQKP 208
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 22/141 (15%)
Query: 353 CEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQII 412
CE +LV E G L+K L N + + +V V+ + YL E +
Sbjct: 87 CEAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEES---NFV 139
Query: 413 HRDVKACNILLDAEFNAKLGDF---------EATIPAGTMG-----YLAPEYVYSGVPSE 458
HRD+ A N+LL + AK+ DF E A T G + APE + S
Sbjct: 140 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 199
Query: 459 KTDVYSFGVVALEV-AAGKSP 478
K+DV+SFGV+ E + G+ P
Sbjct: 200 KSDVWSFGVLMWEAFSYGQKP 220
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 22/141 (15%)
Query: 353 CEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQII 412
CE +LV E G L+K L N + + +V V+ + YL E +
Sbjct: 81 CEAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEES---NFV 133
Query: 413 HRDVKACNILLDAEFNAKLGDF---------EATIPAGTMG-----YLAPEYVYSGVPSE 458
HRD+ A N+LL + AK+ DF E A T G + APE + S
Sbjct: 134 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 193
Query: 459 KTDVYSFGVVALEV-AAGKSP 478
K+DV+SFGV+ E + G+ P
Sbjct: 194 KSDVWSFGVLMWEAFSYGQKP 214
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 22/141 (15%)
Query: 353 CEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQII 412
CE +LV E G L+K L N + + +V V+ + YL E +
Sbjct: 77 CEAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEES---NFV 129
Query: 413 HRDVKACNILLDAEFNAKLGDF---------EATIPAGTMG-----YLAPEYVYSGVPSE 458
HRD+ A N+LL + AK+ DF E A T G + APE + S
Sbjct: 130 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 189
Query: 459 KTDVYSFGVVALEV-AAGKSP 478
K+DV+SFGV+ E + G+ P
Sbjct: 190 KSDVWSFGVLMWEAFSYGQKP 210
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 23/198 (11%)
Query: 290 RIVGEGASATVYKGSL--PSGGAVAVK-RFEKPNRVECARNPFTTEFATMAGCLRHKNLV 346
R +GEG V++G P A+AV + K + R F E TM H ++V
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ-FDHPHIV 74
Query: 347 QLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEE 406
+L G E N + ++ E G L L S L + +++AL+YL
Sbjct: 75 KLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLES- 129
Query: 407 CERQIIHRDVKACNILLDAEFNAKLGDF-------EATIPAGTMG-----YLAPEYVYSG 454
++ +HRD+ A N+L+ + KLGDF ++T + G ++APE +
Sbjct: 130 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 187
Query: 455 VPSEKTDVYSFGVVALEV 472
+ +DV+ FGV E+
Sbjct: 188 RFTSASDVWMFGVCMWEI 205
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 22/141 (15%)
Query: 353 CEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQII 412
CE +LV E G L+K L N + + +V V+ + YL E +
Sbjct: 95 CEAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEES---NFV 147
Query: 413 HRDVKACNILLDAEFNAKLGDF---------EATIPAGTMG-----YLAPEYVYSGVPSE 458
HRD+ A N+LL + AK+ DF E A T G + APE + S
Sbjct: 148 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 207
Query: 459 KTDVYSFGVVALEV-AAGKSP 478
K+DV+SFGV+ E + G+ P
Sbjct: 208 KSDVWSFGVLMWEAFSYGQKP 228
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 292 VGEGASATVYKGSL--PSGGAVAVK-RFEKPNRVEC--ARNPFTTEFATMAGCLRHKNLV 346
+G+G+ V +G PSG V+V + KP+ + A + F E M L H+NL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS-LDHRNLI 74
Query: 347 QLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEE 406
+L G + +V E P GSL L + ++ + + + VA + YL
Sbjct: 75 RLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR---YAVQVAEGMGYLES- 129
Query: 407 CERQIIHRDVKACNILLDAEFNAKLGDF--EATIPAGTMGYL------------APEYVY 452
++ IHRD+ A N+LL K+GDF +P Y+ APE +
Sbjct: 130 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 453 SGVPSEKTDVYSFGVVALEV-AAGKSP 478
+ S +D + FGV E+ G+ P
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F + + +G G+ V + +G A+K +K V+ + T + +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY+ G + L S + IVL YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+L+D + ++ DF GT YLAPE + S
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 292 VGEGASATVYKGSL--PSGGAVAVK-RFEKPNRVEC--ARNPFTTEFATMAGCLRHKNLV 346
+G+G+ V +G PSG V+V + KP+ + A + F E M L H+NL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS-LDHRNLI 78
Query: 347 QLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEE 406
+L G + +V E P GSL L + ++ + + + VA + YL
Sbjct: 79 RLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR---YAVQVAEGMGYLES- 133
Query: 407 CERQIIHRDVKACNILLDAEFNAKLGDF--EATIPAGTMGYL------------APEYVY 452
++ IHRD+ A N+LL K+GDF +P Y+ APE +
Sbjct: 134 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 453 SGVPSEKTDVYSFGVVALEV-AAGKSP 478
+ S +D + FGV E+ G+ P
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 23/198 (11%)
Query: 290 RIVGEGASATVYKGSL--PSGGAVAVK-RFEKPNRVECARNPFTTEFATMAGCLRHKNLV 346
R +GEG V++G P A+AV + K + R F E TM H ++V
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ-FDHPHIV 71
Query: 347 QLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEE 406
+L G E N + ++ E G L L S L + +++AL+YL
Sbjct: 72 KLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLES- 126
Query: 407 CERQIIHRDVKACNILLDAEFNAKLGDF-------EATIPAGTMG-----YLAPEYVYSG 454
++ +HRD+ A N+L+ + KLGDF ++T + G ++APE +
Sbjct: 127 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 184
Query: 455 VPSEKTDVYSFGVVALEV 472
+ +DV+ FGV E+
Sbjct: 185 RFTSASDVWMFGVCMWEI 202
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 292 VGEGASATVYKGSL--PSGGAVAVK-RFEKPNRVEC--ARNPFTTEFATMAGCLRHKNLV 346
+G+G+ V +G PSG V+V + KP+ + A + F E M L H+NL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS-LDHRNLI 74
Query: 347 QLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEE 406
+L G + +V E P GSL L + ++ + + + VA + YL
Sbjct: 75 RLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR---YAVQVAEGMGYLES- 129
Query: 407 CERQIIHRDVKACNILLDAEFNAKLGDF--EATIPAGTMGYL------------APEYVY 452
++ IHRD+ A N+LL K+GDF +P Y+ APE +
Sbjct: 130 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 453 SGVPSEKTDVYSFGVVALEV-AAGKSP 478
+ S +D + FGV E+ G+ P
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 23/198 (11%)
Query: 290 RIVGEGASATVYKGSL--PSGGAVAVK-RFEKPNRVECARNPFTTEFATMAGCLRHKNLV 346
R +GEG V++G P A+AV + K + R F E TM H ++V
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ-FDHPHIV 79
Query: 347 QLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEE 406
+L G E N + ++ E G L L S L + +++AL+YL
Sbjct: 80 KLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLES- 134
Query: 407 CERQIIHRDVKACNILLDAEFNAKLGDF-------EATIPAGTMG-----YLAPEYVYSG 454
++ +HRD+ A N+L+ + KLGDF ++T + G ++APE +
Sbjct: 135 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 192
Query: 455 VPSEKTDVYSFGVVALEV 472
+ +DV+ FGV E+
Sbjct: 193 RFTSASDVWMFGVCMWEI 210
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 23/198 (11%)
Query: 290 RIVGEGASATVYKGSL--PSGGAVAVK-RFEKPNRVECARNPFTTEFATMAGCLRHKNLV 346
R +GEG V++G P A+AV + K + R F E TM H ++V
Sbjct: 18 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ-FDHPHIV 76
Query: 347 QLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEE 406
+L G E N + ++ E G L L S L + +++AL+YL
Sbjct: 77 KLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLES- 131
Query: 407 CERQIIHRDVKACNILLDAEFNAKLGDF-------EATIPAGTMG-----YLAPEYVYSG 454
++ +HRD+ A N+L+ + KLGDF ++T + G ++APE +
Sbjct: 132 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 189
Query: 455 VPSEKTDVYSFGVVALEV 472
+ +DV+ FGV E+
Sbjct: 190 RFTSASDVWMFGVCMWEI 207
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 292 VGEGASATVYKGSL--PSGGAVAVK-RFEKPNRVEC--ARNPFTTEFATMAGCLRHKNLV 346
+G+G+ V +G PSG V+V + KP+ + A + F E M L H+NL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS-LDHRNLI 78
Query: 347 QLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEE 406
+L G + +V E P GSL L + ++ + + + VA + YL
Sbjct: 79 RLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR---YAVQVAEGMGYLES- 133
Query: 407 CERQIIHRDVKACNILLDAEFNAKLGDF--EATIPAGTMGYL------------APEYVY 452
++ IHRD+ A N+LL K+GDF +P Y+ APE +
Sbjct: 134 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 453 SGVPSEKTDVYSFGVVALEV-AAGKSP 478
+ S +D + FGV E+ G+ P
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 23/198 (11%)
Query: 290 RIVGEGASATVYKGSL--PSGGAVAVK-RFEKPNRVECARNPFTTEFATMAGCLRHKNLV 346
R +GEG V++G P A+AV + K + R F E TM H ++V
Sbjct: 19 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ-FDHPHIV 77
Query: 347 QLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEE 406
+L G E N + ++ E G L L S L + +++AL+YL
Sbjct: 78 KLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLES- 132
Query: 407 CERQIIHRDVKACNILLDAEFNAKLGDF-------EATIPAGTMG-----YLAPEYVYSG 454
++ +HRD+ A N+L+ + KLGDF ++T + G ++APE +
Sbjct: 133 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 190
Query: 455 VPSEKTDVYSFGVVALEV 472
+ +DV+ FGV E+
Sbjct: 191 RFTSASDVWMFGVCMWEI 208
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 32/204 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M C+ HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIISL 88
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ LV E L + +L +++ + L E+ ++ + + +
Sbjct: 89 LNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQ------MELDHERMSYLLYQMLXGIKH 141
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAPEYVY 452
LH IIHRD+K NI++ ++ K+ DF AG T Y APE +
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 453 SGVPSEKTDVYSFGVVALEVAAGK 476
E D++S G + E+ K
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 23/198 (11%)
Query: 290 RIVGEGASATVYKGSL--PSGGAVAVK-RFEKPNRVECARNPFTTEFATMAGCLRHKNLV 346
R +GEG V++G P A+AV + K + R F E TM H ++V
Sbjct: 44 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ-FDHPHIV 102
Query: 347 QLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEE 406
+L G E N + ++ E G L L S L + +++AL+YL
Sbjct: 103 KLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLES- 157
Query: 407 CERQIIHRDVKACNILLDAEFNAKLGDF-------EATIPAGTMG-----YLAPEYVYSG 454
++ +HRD+ A N+L+ + KLGDF ++T + G ++APE +
Sbjct: 158 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 215
Query: 455 VPSEKTDVYSFGVVALEV 472
+ +DV+ FGV E+
Sbjct: 216 RFTSASDVWMFGVCMWEI 233
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 292 VGEGASATVYKGSL--PSGGAVAVK-RFEKPNRVEC--ARNPFTTEFATMAGCLRHKNLV 346
+G+G+ V +G PSG V+V + KP+ + A + F E M L H+NL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS-LDHRNLI 84
Query: 347 QLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEE 406
+L G + +V E P GSL L + ++ + + + VA + YL
Sbjct: 85 RLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR---YAVQVAEGMGYLES- 139
Query: 407 CERQIIHRDVKACNILLDAEFNAKLGDF--EATIPAGTMGYL------------APEYVY 452
++ IHRD+ A N+LL K+GDF +P Y+ APE +
Sbjct: 140 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 197
Query: 453 SGVPSEKTDVYSFGVVALEV-AAGKSP 478
+ S +D + FGV E+ G+ P
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 36/221 (16%)
Query: 286 FNKNRIVGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F + + +G G+ V + +G A+K +K V+ + T + +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNS----------SSSIVLSWEKRLNIVL 394
L +L+ + + L +V EY P G + L ++ IVL++E
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE------- 156
Query: 395 GVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYL 446
YLH +I+RD+K N+++D + K+ DF GT YL
Sbjct: 157 -------YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYL 206
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
APE + S ++ D ++ GV+ E+AAG P D + +
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVY-KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F++ + +G G+ V SG A+K +K V+ + T + +
Sbjct: 30 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 89
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY+ G + L S + IVL YLH
Sbjct: 90 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 145
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+L+D + ++ DF GT YLAPE + S
Sbjct: 146 S---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 202
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 203 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 233
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVY-KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F++ + +G G+ V SG A+K +K V+ + T + +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY+ G + L S + IVL YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+L+D + ++ DF GT YLAPE + S
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGY 215
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 26/209 (12%)
Query: 286 FNKNRIVGEGASATVY--KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
+ R++G+G+ V K + +G AVK K + + L H
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
N+ +L + + LV E G L D+I+ S + + I+ V S ++Y
Sbjct: 87 NIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSGITY 141
Query: 403 LHEECERQIIHRDVKACNILLDA---EFNAKLGD------FEATIPA----GTMGYLAPE 449
H+ +I+HRD+K N+LL++ + N ++ D FEA+ GT Y+APE
Sbjct: 142 XHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPE 198
Query: 450 YVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
V G EK DV+S GV+ + +G P
Sbjct: 199 -VLHGTYDEKCDVWSTGVILYILLSGCPP 226
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F++ + +G G+ V SG A+K +K V+ + T + +
Sbjct: 44 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY+ G + L S + IVL YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 159
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+L+D + ++ DF GT YLAPE + S
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 32/204 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M C+ HKN++ L
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIISL 81
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ LV E L + +L +++ + L E+ ++ + + +
Sbjct: 82 LNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQ------MELDHERMSYLLYQMLXGIKH 134
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAPEYVY 452
LH IIHRD+K NI++ ++ K+ DF AG T Y APE +
Sbjct: 135 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 191
Query: 453 SGVPSEKTDVYSFGVVALEVAAGK 476
E D++S G + E+ K
Sbjct: 192 GMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVY-KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F++ + +G G+ V SG A+K +K V+ + T + +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY+ G + L S + IVL YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+L+D + ++ DF GT YLAPE + S
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 25/199 (12%)
Query: 290 RIVGEGASATVYKGSLPS----GGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNL 345
R +GEG V++G S AVA+K K + R F E TM H ++
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDSVREKFLQEALTMRQ-FDHPHI 453
Query: 346 VQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
V+L G E N + ++ E G L L S L + +++AL+YL
Sbjct: 454 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFS---LDLASLILYAYQLSTALAYLES 509
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF-------EATIPAGTMG-----YLAPEYVYS 453
++ +HRD+ A N+L+ + KLGDF ++T + G ++APE +
Sbjct: 510 ---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 566
Query: 454 GVPSEKTDVYSFGVVALEV 472
+ +DV+ FGV E+
Sbjct: 567 RRFTSASDVWMFGVCMWEI 585
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVY-KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F++ + +G G+ V SG A+K +K V+ + T + +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY+ G + L S + IVL YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+L+D + ++ DF GT YLAPE + S
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVY-KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F++ + +G G+ V SG A+K +K V+ + T + +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY+ G + L S + IVL YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+L+D + ++ DF GT YLAPE + S
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F++ + +G G+ V SG A+K +K V+ + T + +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY+ G + L S + IVL YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+L+D + ++ DF GT YLAPE + S
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 90/207 (43%), Gaps = 28/207 (13%)
Query: 292 VGEGASATVYKGSL--PSGGAVAVK-RFEKPNRVEC--ARNPFTTEFATMAGCLRHKNLV 346
+G+G+ V +G PSG V+V + KP+ + A + F E M L H+NL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS-LDHRNLI 74
Query: 347 QLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEE 406
+L G + +V E P GSL L + ++ + + + VA + YL
Sbjct: 75 RLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR---YAVQVAEGMGYLES- 129
Query: 407 CERQIIHRDVKACNILLDAEFNAKLGDF--EATIPAG------------TMGYLAPEYVY 452
++ IHRD+ A N+LL K+GDF +P + APE +
Sbjct: 130 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 187
Query: 453 SGVPSEKTDVYSFGVVALEV-AAGKSP 478
+ S +D + FGV E+ G+ P
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 34/178 (19%)
Query: 384 LSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF--------- 434
L+ E + VA + +L R+ IHRD+ A NILL + K+ DF
Sbjct: 190 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 435 -------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSPVDNDGCVI 486
+A +P + ++APE ++ V + ++DV+SFGV+ E+ + G SP G I
Sbjct: 247 PDYVRKGDARLP---LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVKI 301
Query: 487 VDWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARIL 544
+ K+G + A D+ M L C H +RP+ E L
Sbjct: 302 DEEFCRRLKEGTRMRAPDY---------TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 34/178 (19%)
Query: 384 LSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF--------- 434
L+ E + VA + +L R+ IHRD+ A NILL + K+ DF
Sbjct: 195 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 435 -------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSPVDNDGCVI 486
+A +P + ++APE ++ V + ++DV+SFGV+ E+ + G SP G I
Sbjct: 252 PDYVRKGDARLP---LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVKI 306
Query: 487 VDWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARIL 544
+ K+G + A D+ M L C H +RP+ E L
Sbjct: 307 DEEFCRRLKEGTRMRAPDY---------TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 16/206 (7%)
Query: 286 FNKNRIVGEGASATVY-KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F++ + +G G+ V SG A+K +K V+ + T + +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY+ G + L S + IVL YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+L+D + ++ DF GT YLAPE + S
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDND 482
++ D ++ GV+ E+AAG P D
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 34/178 (19%)
Query: 384 LSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF--------- 434
L+ E + VA + +L R+ IHRD+ A NILL + K+ DF
Sbjct: 188 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 435 -------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSPVDNDGCVI 486
+A +P + ++APE ++ V + ++DV+SFGV+ E+ + G SP G I
Sbjct: 245 PDYVRKGDARLP---LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVKI 299
Query: 487 VDWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARIL 544
+ K+G + A D+ M L C H +RP+ E L
Sbjct: 300 DEEFCRRLKEGTRMRAPDY---------TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 291 IVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECAR--NPFTTEFATMAGCLRHKNLVQ 347
I+G+GA+A V++G +G A+K F N + R + EF + L HKN+V+
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVF---NNISFLRPVDVQMREFEVLKK-LNHKNIVK 71
Query: 348 LQGWCCEGN--ELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
L E VL+ E+ P GSL +L S++ L + L ++ V +++L E
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSLYTVL-EEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 406 ECERQIIHRDVKACNILL----DAEFNAKLGDFEA----------TIPAGTMGYLAPEYV 451
I+HR++K NI+ D + KL DF A GT YL P+
Sbjct: 131 NG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMY 187
Query: 452 YSGVPSE--------KTDVYSFGVVALEVAAGKSP 478
V + D++S GV A G P
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 90/207 (43%), Gaps = 28/207 (13%)
Query: 292 VGEGASATVYKGSL--PSGGAVAVK-RFEKPNRVEC--ARNPFTTEFATMAGCLRHKNLV 346
+G+G+ V +G PSG V+V + KP+ + A + F E M L H+NL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS-LDHRNLI 84
Query: 347 QLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEE 406
+L G + +V E P GSL L + ++ + + + VA + YL
Sbjct: 85 RLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR---YAVQVAEGMGYLES- 139
Query: 407 CERQIIHRDVKACNILLDAEFNAKLGDF--EATIPAG------------TMGYLAPEYVY 452
++ IHRD+ A N+LL K+GDF +P + APE +
Sbjct: 140 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 197
Query: 453 SGVPSEKTDVYSFGVVALEV-AAGKSP 478
+ S +D + FGV E+ G+ P
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 34/178 (19%)
Query: 384 LSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF--------- 434
L+ E + VA + +L R+ IHRD+ A NILL + K+ DF
Sbjct: 197 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 435 -------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSPVDNDGCVI 486
+A +P + ++APE ++ V + ++DV+SFGV+ E+ + G SP G I
Sbjct: 254 PDYVRKGDARLP---LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVKI 308
Query: 487 VDWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAARIL 544
+ K+G + A D+ M L C H +RP+ E L
Sbjct: 309 DEEFCRRLKEGTRMRAPDY---------TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 291 IVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECAR--NPFTTEFATMAGCLRHKNLVQ 347
I+G+GA+A V++G +G A+K F N + R + EF + L HKN+V+
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVF---NNISFLRPVDVQMREFEVLKK-LNHKNIVK 71
Query: 348 LQGWCCEGN--ELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
L E VL+ E+ P GSL +L S++ L + L ++ V +++L E
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSLYTVL-EEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 406 ECERQIIHRDVKACNILL----DAEFNAKLGDFEATIPA----------GTMGYLAPEYV 451
I+HR++K NI+ D + KL DF A GT YL P+
Sbjct: 131 NG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMY 187
Query: 452 YSGVPSE--------KTDVYSFGVVALEVAAGKSP 478
V + D++S GV A G P
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 96/227 (42%), Gaps = 45/227 (19%)
Query: 292 VGEGASATVYKG-SLPSGGA-VAVKRFEKPNRVECARN--PFTT--EFATMAG--CLRHK 343
+GEGA V+K L +GG VA+KR RV+ P +T E A + H
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV----RVQTGEEGMPLSTIREVAVLRHLETFEHP 74
Query: 344 NLVQLQGWCC-----EGNELVLVYEYLPNG---SLDKILHNNSSSSIVLSWEKRLNIVLG 395
N+V+L C +L LV+E++ LDK+ + + +++
Sbjct: 75 NVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK------DMMFQ 128
Query: 396 VASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF----------EATIPAGTMGY 445
+ L +LH +++HRD+K NIL+ + KL DF T T+ Y
Sbjct: 129 LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWY 185
Query: 446 LAPEYVYSGVPSEKTDVYSFGVVALE------VAAGKSPVDNDGCVI 486
APE + + D++S G + E + G S VD G ++
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVY-KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F++ + +G G+ V SG A+K +K V+ + T + +
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY+ G + L S + IVL YLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 179
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+L+D + ++ DF GT YLAPE + S
Sbjct: 180 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGY 236
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 237 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 267
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 96/227 (42%), Gaps = 45/227 (19%)
Query: 292 VGEGASATVYKG-SLPSGGA-VAVKRFEKPNRVECARN--PFTT--EFATMAG--CLRHK 343
+GEGA V+K L +GG VA+KR RV+ P +T E A + H
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV----RVQTGEEGMPLSTIREVAVLRHLETFEHP 74
Query: 344 NLVQLQGWCC-----EGNELVLVYEYLPNG---SLDKILHNNSSSSIVLSWEKRLNIVLG 395
N+V+L C +L LV+E++ LDK+ + + +++
Sbjct: 75 NVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK------DMMFQ 128
Query: 396 VASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF----------EATIPAGTMGY 445
+ L +LH +++HRD+K NIL+ + KL DF T T+ Y
Sbjct: 129 LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWY 185
Query: 446 LAPEYVYSGVPSEKTDVYSFGVVALE------VAAGKSPVDNDGCVI 486
APE + + D++S G + E + G S VD G ++
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 96/227 (42%), Gaps = 45/227 (19%)
Query: 292 VGEGASATVYKG-SLPSGGA-VAVKRFEKPNRVECARN--PFTT--EFATMAG--CLRHK 343
+GEGA V+K L +GG VA+KR RV+ P +T E A + H
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV----RVQTGEEGMPLSTIREVAVLRHLETFEHP 74
Query: 344 NLVQLQGWCC-----EGNELVLVYEYLPNG---SLDKILHNNSSSSIVLSWEKRLNIVLG 395
N+V+L C +L LV+E++ LDK+ + + +++
Sbjct: 75 NVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK------DMMFQ 128
Query: 396 VASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF----------EATIPAGTMGY 445
+ L +LH +++HRD+K NIL+ + KL DF T T+ Y
Sbjct: 129 LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWY 185
Query: 446 LAPEYVYSGVPSEKTDVYSFGVVALE------VAAGKSPVDNDGCVI 486
APE + + D++S G + E + G S VD G ++
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 95/242 (39%), Gaps = 60/242 (24%)
Query: 270 VPMRLALTDIKQATLGFNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPF 329
+P+ + T KQ + + +G+G V+ G G VAVK F F
Sbjct: 27 LPLLVQRTIAKQIQM----VKQIGKGRYGEVWMGKW-RGEKVAVKVF------------F 69
Query: 330 TTEFAT--------MAGCLRHKNLVQLQGWCCEGN----ELVLVYEYLPNGSLDKILHNN 377
TTE A+ +RH+N++ +G +L L+ +Y NGSL L
Sbjct: 70 TTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL--- 126
Query: 378 SSSSIVLSWEKRLNIVLGVASALSYLHEEC-----ERQIIHRDVKACNILLDAEFNAKLG 432
S L + L + S L +LH E + I HRD+K+ NIL+ +
Sbjct: 127 --KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA 184
Query: 433 DF-----------EATIP----AGTMGYLAPEYVYSGVPSEK------TDVYSFGVVALE 471
D E IP GT Y+ PE + + D+YSFG++ E
Sbjct: 185 DLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWE 244
Query: 472 VA 473
VA
Sbjct: 245 VA 246
>pdb|1WBF|A Chain A, Winged Bean Lectin, Saccharide Free Form
pdb|1WBF|B Chain B, Winged Bean Lectin, Saccharide Free Form
pdb|2D3S|A Chain A, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|B Chain B, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|C Chain C, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|D Chain D, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
Length = 242
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 70/171 (40%), Gaps = 19/171 (11%)
Query: 3 DPKTNTTASFSCRFSFSI-IPSPLCAFGDGFAFLITSNADSFGNDNGYMGLPGPVLSPQD 61
D T ASF RFSFSI P P DG F I G GY G+ P LSP
Sbjct: 60 DSTTGNVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQTGEGGGYFGIYNP-LSPY- 117
Query: 62 SFFAVEFDT---SFDPSLXXXXXXXXXXXXXXXXXXXXXDALSRGIDLKSGRHITTWIEY 118
F AVEFDT ++DP + + L +G I+Y
Sbjct: 118 PFVAVEFDTFRNTWDPQIPHIGIDVNSVISTK----------TVPFTLDNGGIANVVIKY 167
Query: 119 RDSLKLIRVWAGYSQIRPPSPLIIAQI-DLSKQFKDYMHVGFSAANGQGSA 168
S K++ V + + + IA I DL + + ++VGFSAA G S
Sbjct: 168 DASTKILHVVLVFPSLG--TIYTIADIVDLKQVLPESVNVGFSAATGDPSG 216
>pdb|1WBL|A Chain A, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|B Chain B, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|C Chain C, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|D Chain D, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|2DTW|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTY|A Chain A, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|B Chain B, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|C Chain C, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|D Chain D, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DU0|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU1|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2E51|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E53|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2ZMK|A Chain A, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|B Chain B, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|C Chain C, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|D Chain D, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZML|A Chain A, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|B Chain B, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|C Chain C, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|D Chain D, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZMN|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
Length = 241
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 70/171 (40%), Gaps = 19/171 (11%)
Query: 3 DPKTNTTASFSCRFSFSI-IPSPLCAFGDGFAFLITSNADSFGNDNGYMGLPGPVLSPQD 61
D T ASF RFSFSI P P DG F I G GY G+ P LSP
Sbjct: 59 DSTTGNVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQTGEGGGYFGIYNP-LSPY- 116
Query: 62 SFFAVEFDT---SFDPSLXXXXXXXXXXXXXXXXXXXXXDALSRGIDLKSGRHITTWIEY 118
F AVEFDT ++DP + + L +G I+Y
Sbjct: 117 PFVAVEFDTFRNTWDPQIPHIGIDVNSVISTK----------TVPFTLDNGGIANVVIKY 166
Query: 119 RDSLKLIRVWAGYSQIRPPSPLIIAQI-DLSKQFKDYMHVGFSAANGQGSA 168
S K++ V + + + IA I DL + + ++VGFSAA G S
Sbjct: 167 DASTKILHVVLVFPSLG--TIYTIADIVDLKQVLPESVNVGFSAATGDPSG 215
>pdb|2E7Q|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7T|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
Length = 237
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 69/171 (40%), Gaps = 19/171 (11%)
Query: 3 DPKTNTTASFSCRFSFSI-IPSPLCAFGDGFAFLITSNADSFGNDNGYMGLPGPVLSPQD 61
D T ASF RFSFSI P P DG F I G GY G+ P LSP
Sbjct: 59 DSTTGNVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQTGEGGGYFGIYNP-LSPY- 116
Query: 62 SFFAVEFDT---SFDPSLXXXXXXXXXXXXXXXXXXXXXDALSRGIDLKSGRHITTWIEY 118
F AVEFDT ++DP + L +G I+Y
Sbjct: 117 PFVAVEFDTFRNTWDPQIPHIGIDVNSVISTKTVP----------FTLDNGGIANVVIKY 166
Query: 119 RDSLKLIRVWAGYSQIRPPSPLIIAQI-DLSKQFKDYMHVGFSAANGQGSA 168
S K++ V + + + IA I DL + + ++VGFSAA G S
Sbjct: 167 DASTKILHVVLVFPSLG--TIYTIADIVDLKQVLPESVNVGFSAATGDPSG 215
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 28/207 (13%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
+ + + +G GA V G VAVK+ +P + + E + C+ HKN
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLK-CVNHKN 82
Query: 345 LVQL------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVAS 398
++ L Q E ++ LV E L + +L +++H + L E+ ++ +
Sbjct: 83 IISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIH------MELDHERMSYLLYQMLC 135
Query: 399 ALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAP 448
+ +LH IIHRD+K NI++ ++ K+ DF A T Y AP
Sbjct: 136 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAP 192
Query: 449 EYVYSGVPSEKTDVYSFGVVALEVAAG 475
E + E D++S G + E+ G
Sbjct: 193 EVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 46/215 (21%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+G V++G G VAVK F +R E R+ F LRH+N++ G+
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIF--SSREE--RSWFREAEIYQTVMLRHENIL---GF 101
Query: 352 CCEGN-------ELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
N +L LV +Y +GSL L+ + ++ E + + L AS L++LH
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLH 156
Query: 405 EEC-----ERQIIHRDVKACNILLDAEFNAKLGDFEATI---------------PAGTMG 444
E + I HRD+K+ NIL+ + D + GT
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 216
Query: 445 YLAPEYVYSGVPS------EKTDVYSFGVVALEVA 473
Y+APE + + ++ D+Y+ G+V E+A
Sbjct: 217 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 25/201 (12%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
VG GA +V SG VA+K+ +P + E E + ++H+N++ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKH-MQHENVIGLLD 90
Query: 351 WCCEGNELVLVYEY---LP--NGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
+ L Y++ +P L KI+ + S EK +V + L Y+H
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIM------GLKFSEEKIQYLVYQMLKGLKYIHS 144
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVPS 457
++HRD+K N+ ++ + K+ DF E T T Y APE + S +
Sbjct: 145 AG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHY 201
Query: 458 EKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ GK+
Sbjct: 202 NQTVDIWSVGCIMAEMLTGKT 222
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 46/215 (21%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+G V++G G VAVK F +R E R+ F LRH+N++ G+
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIF--SSREE--RSWFREAEIYQTVMLRHENIL---GF 88
Query: 352 CCEGN-------ELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
N +L LV +Y +GSL L+ + ++ E + + L AS L++LH
Sbjct: 89 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLH 143
Query: 405 EEC-----ERQIIHRDVKACNILLDAEFNAKLGDFEATI---------------PAGTMG 444
E + I HRD+K+ NIL+ + D + GT
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 203
Query: 445 YLAPEYVYSGVPS------EKTDVYSFGVVALEVA 473
Y+APE + + ++ D+Y+ G+V E+A
Sbjct: 204 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVY-KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F++ + +G G+ V SG A+K +K V+ + T + +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY+ G + L + + IVL YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVL----TFEYLH 158
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+L+D + ++ DF GT YLAPE + S
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 46/215 (21%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+G V++G G VAVK F +R E R+ F LRH+N++ G+
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIF--SSREE--RSWFREAEIYQTVMLRHENIL---GF 65
Query: 352 CCEGN-------ELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
N +L LV +Y +GSL L+ + + E + + L AS L++LH
Sbjct: 66 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV-----EGMIKLALSTASGLAHLH 120
Query: 405 EEC-----ERQIIHRDVKACNILLDAEFNAKLGDFEATI---------------PAGTMG 444
E + I HRD+K+ NIL+ + D + GT
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 180
Query: 445 YLAPEYVYSGVPS------EKTDVYSFGVVALEVA 473
Y+APE + + ++ D+Y+ G+V E+A
Sbjct: 181 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 215
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVY-KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F++ + +G G+ V SG A+K +K V+ + T + +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY+ G + L S + IVL YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+L+D + ++ DF GT YLAPE + S
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ ++AAG P D + +
Sbjct: 216 NKAVDWWALGVLIYQMAAGYPPFFADQPIQI 246
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 46/215 (21%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+G V++G G VAVK F +R E R+ F LRH+N++ G+
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIF--SSREE--RSWFREAEIYQTVMLRHENIL---GF 63
Query: 352 CCEGN-------ELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
N +L LV +Y +GSL L+ + + E + + L AS L++LH
Sbjct: 64 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV-----EGMIKLALSTASGLAHLH 118
Query: 405 EEC-----ERQIIHRDVKACNILLDAEFNAKLGDFEATI---------------PAGTMG 444
E + I HRD+K+ NIL+ + D + GT
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 178
Query: 445 YLAPEYVYSGVPS------EKTDVYSFGVVALEVA 473
Y+APE + + ++ D+Y+ G+V E+A
Sbjct: 179 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 213
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 32/203 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M C+ HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIIGL 88
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ +V E L + +L +++ + L E+ ++ + + +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQ------MELDHERMSYLLYQMLCGIKH 141
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAPEYVY 452
LH IIHRD+K NI++ ++ K+ DF AG T Y APE +
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 453 SGVPSEKTDVYSFGVVALEVAAG 475
E D++S G + E+ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 32/203 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M C+ HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIIGL 88
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ +V E L + +L +++ + L E+ ++ + + +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQ------MELDHERMSYLLYQMLCGIKH 141
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAPEYVY 452
LH IIHRD+K NI++ ++ K+ DF AG T Y APE +
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 453 SGVPSEKTDVYSFGVVALEVAAG 475
E D++S G + E+ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVY-KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F++ + +G G+ V SG A+K +K V+ + T + +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY+ G + L S + IVL YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+++D + ++ DF GT YLAPE + S
Sbjct: 159 S---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKGY 215
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 46/215 (21%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+G V++G G VAVK F +R E R+ F LRH+N++ G+
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIF--SSREE--RSWFREAEIYQTVMLRHENIL---GF 68
Query: 352 CCEGN-------ELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
N +L LV +Y +GSL L+ + ++ E + + L AS L++LH
Sbjct: 69 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLH 123
Query: 405 EEC-----ERQIIHRDVKACNILLDAEFNAKLGDFEATI---------------PAGTMG 444
E + I HRD+K+ NIL+ + D + GT
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 183
Query: 445 YLAPEYVYSGVPS------EKTDVYSFGVVALEVA 473
Y+APE + + ++ D+Y+ G+V E+A
Sbjct: 184 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 218
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 36/221 (16%)
Query: 286 FNKNRIVGEGASATVY-KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F++ + +G G+ V SG A+K +K V+ + T + +
Sbjct: 38 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 97
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNS----------SSSIVLSWEKRLNIVL 394
LV+L+ + + L +V EY+ G + L ++ IVL++E
Sbjct: 98 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE------- 150
Query: 395 GVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYL 446
YLH +I+RD+K N+L+D + ++ DF GT YL
Sbjct: 151 -------YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYL 200
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
APE + S ++ D ++ GV+ E+AAG P D + +
Sbjct: 201 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 241
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 17/159 (10%)
Query: 334 ATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIV 393
A++ L+H ++V+L L +V+E++ L + + + V S + +
Sbjct: 77 ASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYM 136
Query: 394 LGVASALSYLHEECERQIIHRDVKACNILLDAEFNA---KLGDFEATIPAGTMG------ 444
+ AL Y H + IIHRDVK +LL ++ N+ KLG F I G G
Sbjct: 137 RQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR 193
Query: 445 -----YLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
++APE V + DV+ GV+ + +G P
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 46/215 (21%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G+G V++G G VAVK F +R E R+ F LRH+N++ G+
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIF--SSREE--RSWFREAEIYQTVMLRHENIL---GF 62
Query: 352 CCEGN-------ELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
N +L LV +Y +GSL L+ + + E + + L AS L++LH
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV-----EGMIKLALSTASGLAHLH 117
Query: 405 EEC-----ERQIIHRDVKACNILLDAEFNAKLGDFEATI---------------PAGTMG 444
E + I HRD+K+ NIL+ + D + GT
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 177
Query: 445 YLAPEYVYSGVPS------EKTDVYSFGVVALEVA 473
Y+APE + + ++ D+Y+ G+V E+A
Sbjct: 178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 87/210 (41%), Gaps = 27/210 (12%)
Query: 292 VGEGASATVYKGSLPSGG-----AVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLV 346
+G G A V K S G KR + +R +R E + + L H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH-NVI 78
Query: 347 QLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEE 406
L ++VL+ E + G L L S LS E+ + + + ++YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEEATSFIKQILDGVNYLHT- 133
Query: 407 CERQIIHRDVKACNI-LLDAEF---NAKLGDF----------EATIPAGTMGYLAPEYVY 452
++I H D+K NI LLD + KL DF E GT ++APE V
Sbjct: 134 --KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 453 SGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ D++S GV+ + +G SP D
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGD 221
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 36/221 (16%)
Query: 286 FNKNRIVGEGASATVY-KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F++ + +G G+ V SG A+K +K V+ + T + +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNS----------SSSIVLSWEKRLNIVL 394
LV+L+ + + L +V EY+ G + L ++ IVL++E
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE------- 155
Query: 395 GVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYL 446
YLH +I+RD+K N+L+D + ++ DF GT YL
Sbjct: 156 -------YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYL 205
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
APE + S ++ D ++ GV+ E+AAG P D + +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 36/221 (16%)
Query: 286 FNKNRIVGEGASATVY-KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F++ + +G G+ V SG A+K +K V+ + T + +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNS----------SSSIVLSWEKRLNIVL 394
LV+L+ + + L +V EY+ G + L ++ IVL++E
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE------- 155
Query: 395 GVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYL 446
YLH +I+RD+K N+L+D + ++ DF GT YL
Sbjct: 156 -------YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYL 205
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
APE + S ++ D ++ GV+ E+AAG P D + +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 25/201 (12%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
VG GA +V SG VA+K+ +P + E E + ++H+N++ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKH-MQHENVIGLLD 108
Query: 351 WCCEGNELVLVYEY---LP--NGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHE 405
+ L Y++ +P L KI+ + S EK +V + L Y+H
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIM------GMEFSEEKIQYLVYQMLKGLKYIHS 162
Query: 406 ECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVPS 457
++HRD+K N+ ++ + K+ DF E T T Y APE + S +
Sbjct: 163 AG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHY 219
Query: 458 EKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ GK+
Sbjct: 220 NQTVDIWSVGCIMAEMLTGKT 240
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVAS 398
L H N+++L + + +V E G L D+I+ S I+ V S
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR-----FSEHDAARIIKQVFS 132
Query: 399 ALSYLHEECERQIIHRDVKACNILLDA---EFNAKLGDFEATI----------PAGTMGY 445
++Y+H+ I+HRD+K NILL++ + + K+ DF + GT Y
Sbjct: 133 GITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 446 LAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
+APE V G EK DV+S GV+ + +G P
Sbjct: 190 IAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVAS 398
L H N+++L + + +V E G L D+I+ S I+ V S
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR-----FSEHDAARIIKQVFS 132
Query: 399 ALSYLHEECERQIIHRDVKACNILLDA---EFNAKLGDFEATI----------PAGTMGY 445
++Y+H+ I+HRD+K NILL++ + + K+ DF + GT Y
Sbjct: 133 GITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 446 LAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
+APE V G EK DV+S GV+ + +G P
Sbjct: 190 IAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 87/210 (41%), Gaps = 27/210 (12%)
Query: 292 VGEGASATVYKGSLPSGG-----AVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLV 346
+G G A V K S G KR + +R +R E + + L H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH-NVI 78
Query: 347 QLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEE 406
L ++VL+ E + G L L S LS E+ + + + ++YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEEATSFIKQILDGVNYLHT- 133
Query: 407 CERQIIHRDVKACNI-LLDAEF---NAKLGDF----------EATIPAGTMGYLAPEYVY 452
++I H D+K NI LLD + KL DF E GT ++APE V
Sbjct: 134 --KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 453 SGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ D++S GV+ + +G SP D
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGD 221
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVAS 398
L H N+++L + + +V E G L D+I+ S I+ V S
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR-----FSEHDAARIIKQVFS 132
Query: 399 ALSYLHEECERQIIHRDVKACNILLDA---EFNAKLGDFEATI----------PAGTMGY 445
++Y+H+ I+HRD+K NILL++ + + K+ DF + GT Y
Sbjct: 133 GITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 446 LAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
+APE V G EK DV+S GV+ + +G P
Sbjct: 190 IAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 21/207 (10%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
+ K +GEG TV+K + + VA+KR + E + E + L+HKN
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKE-LKHKN 62
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+V+L +L LV+E+ + L K S + L E + + + L + H
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFC-DQDLKKYF---DSCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG-----------TMGYLAPEYVY- 452
R ++HRD+K N+L++ KL +F G T+ Y P+ ++
Sbjct: 119 S---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG 175
Query: 453 SGVPSEKTDVYSFGVVALEVAAGKSPV 479
+ + S D++S G + E+A P+
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 36/221 (16%)
Query: 286 FNKNRIVGEGASATVY-KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F++ + +G G+ V SG A+K +K V+ + T + +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNS----------SSSIVLSWEKRLNIVL 394
LV+L+ + + L +V EY+ G + L ++ IVL++E
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE------- 155
Query: 395 GVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYL 446
YLH +I+RD+K N+L+D + ++ DF GT YL
Sbjct: 156 -------YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYL 205
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
APE + S ++ D ++ GV+ E+AAG P D + +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 87/210 (41%), Gaps = 27/210 (12%)
Query: 292 VGEGASATVYKGSLPSGG-----AVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLV 346
+G G A V K S G KR + +R +R E + + L H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH-NVI 78
Query: 347 QLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEE 406
L ++VL+ E + G L L S LS E+ + + + ++YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEEATSFIKQILDGVNYLHT- 133
Query: 407 CERQIIHRDVKACNI-LLDAEF---NAKLGDF----------EATIPAGTMGYLAPEYVY 452
++I H D+K NI LLD + KL DF E GT ++APE V
Sbjct: 134 --KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 453 SGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ D++S GV+ + +G SP D
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGD 221
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 17/159 (10%)
Query: 334 ATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIV 393
A++ L+H ++V+L L +V+E++ L + + + V S + +
Sbjct: 79 ASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYM 138
Query: 394 LGVASALSYLHEECERQIIHRDVKACNILLDAEFNA---KLGDFEATIPAGTMG------ 444
+ AL Y H+ IIHRDVK +LL ++ N+ KLG F I G G
Sbjct: 139 RQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR 195
Query: 445 -----YLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
++APE V + DV+ GV+ + +G P
Sbjct: 196 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 234
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 87/210 (41%), Gaps = 27/210 (12%)
Query: 292 VGEGASATVYKGSLPSGG-----AVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLV 346
+G G A V K S G KR + +R +R E + + L H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH-NVI 78
Query: 347 QLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEE 406
L ++VL+ E + G L L S LS E+ + + + ++YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEEATSFIKQILDGVNYLHT- 133
Query: 407 CERQIIHRDVKACNI-LLDAEF---NAKLGDF----------EATIPAGTMGYLAPEYVY 452
++I H D+K NI LLD + KL DF E GT ++APE V
Sbjct: 134 --KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 453 SGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ D++S GV+ + +G SP D
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGD 221
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 87/210 (41%), Gaps = 27/210 (12%)
Query: 292 VGEGASATVYKGSLPSGG-----AVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLV 346
+G G A V K S G KR + +R +R E + + L H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH-NVI 78
Query: 347 QLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEE 406
L ++VL+ E + G L L S LS E+ + + + ++YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEEATSFIKQILDGVNYLHT- 133
Query: 407 CERQIIHRDVKACNI-LLDAEF---NAKLGDF----------EATIPAGTMGYLAPEYVY 452
++I H D+K NI LLD + KL DF E GT ++APE V
Sbjct: 134 --KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 453 SGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ D++S GV+ + +G SP D
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGD 221
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 25/168 (14%)
Query: 335 TMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIV 393
++ L H N+++L + LV E+ G L ++I++ + + NI+
Sbjct: 98 SLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA-----NIM 152
Query: 394 LGVASALSYLHEECERQIIHRDVKACNILLDAE---FNAKLGDF----------EATIPA 440
+ S + YLH+ I+HRD+K NILL+ + N K+ DF +
Sbjct: 153 KQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL 209
Query: 441 GTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPV--DNDGCVI 486
GT Y+APE V +EK DV+S GV+ + G P ND +I
Sbjct: 210 GTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDII 256
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 26/106 (24%)
Query: 390 LNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATI 438
L+I + +A A+ +LH + ++HRD+K NI + K+GDF E T+
Sbjct: 167 LHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 439 ----PA--------GTMGYLAPEYVYSGVPSEKTDVYSFGVVALEV 472
PA GT Y++PE ++ S K D++S G++ E+
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 32/204 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M C+ HKN++ L
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIISL 126
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ LV E L + +L +++ + L E+ ++ + + +
Sbjct: 127 LNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 179
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAPEYVY 452
LH IIHRD+K NI++ ++ K+ DF AG T Y APE +
Sbjct: 180 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 236
Query: 453 SGVPSEKTDVYSFGVVALEVAAGK 476
E D++S G + E+ K
Sbjct: 237 GMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 32/203 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M C+ HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIIGL 88
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ +V E L + +L +++ + L E+ ++ + + +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 141
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGTMGYLAPEYV--YSGVPS--- 457
LH IIHRD+K NI++ ++ K+ DF AGT + PE V Y P
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVIL 198
Query: 458 -----EKTDVYSFGVVALEVAAG 475
E D++S G + E+ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 46/215 (21%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
VG+G V++G L G +VAVK F + R T + T+ LRH N++ G+
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRE--TEIYNTV--LLRHDNIL---GF 67
Query: 352 CCE-------GNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+L L+ Y +GSL L + L L + + A L++LH
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQT-----LEPHLALRLAVSAACGLAHLH 122
Query: 405 EEC-----ERQIIHRDVKACNILLDAEFNAKLGDFEATI---------------PAGTMG 444
E + I HRD K+ N+L+ + + D + GT
Sbjct: 123 VEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKR 182
Query: 445 YLAPEYVYSGVPSE------KTDVYSFGVVALEVA 473
Y+APE + + ++ TD+++FG+V E+A
Sbjct: 183 YMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIA 217
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 36/221 (16%)
Query: 286 FNKNRIVGEGASATVY-KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F++ + +G G+ V SG A+K +K V+ + T + +
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNS----------SSSIVLSWEKRLNIVL 394
LV+L+ + + L +V EY+ G + L ++ IVL++E
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE------- 176
Query: 395 GVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYL 446
YLH +I+RD+K N+L+D + ++ DF GT YL
Sbjct: 177 -------YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYL 226
Query: 447 APEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
APE + S ++ D ++ GV+ E+AAG P D + +
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 267
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 32/204 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M C+ HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIISL 88
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ LV E L + +L +++ + L E+ ++ + + +
Sbjct: 89 LNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 141
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAPEYVY 452
LH IIHRD+K NI++ ++ K+ DF AG T Y APE +
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 453 SGVPSEKTDVYSFGVVALEVAAGK 476
E D++S G + E+ K
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 32/204 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M C+ HKN++ L
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIISL 89
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ LV E L + +L +++ + L E+ ++ + + +
Sbjct: 90 LNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 142
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAPEYVY 452
LH IIHRD+K NI++ ++ K+ DF AG T Y APE +
Sbjct: 143 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 199
Query: 453 SGVPSEKTDVYSFGVVALEVAAGK 476
E D++S G + E+ K
Sbjct: 200 GMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 32/204 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M C+ HKN++ L
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIISL 82
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ LV E L + +L +++ + L E+ ++ + + +
Sbjct: 83 LNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 135
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAPEYVY 452
LH IIHRD+K NI++ ++ K+ DF AG T Y APE +
Sbjct: 136 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 192
Query: 453 SGVPSEKTDVYSFGVVALEVAAGK 476
E D++S G + E+ K
Sbjct: 193 GMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 86/220 (39%), Gaps = 40/220 (18%)
Query: 292 VGEGASATV-YKGSLPSGGAVAVKRF---EKPNRVECARNPFTTEFATMAGCLRHKNLVQ 347
+GEG + V L G A+KR E+ +R E R A M H N+++
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQRE------ADMHRLFNHPNILR 90
Query: 348 LQGWCCE----GNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L +C +E L+ + G+L + L+ ++ L ++LG+ L +
Sbjct: 91 LVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI 150
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG--------------------TM 443
H + HRD+K NILL E L D + A T+
Sbjct: 151 HA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 444 GYLAPEYVY---SGVPSEKTDVYSFGVVALEVAAGKSPVD 480
Y APE V E+TDV+S G V + G+ P D
Sbjct: 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 32/204 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M C+ HKN++ L
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIISL 87
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ LV E L + +L +++ + L E+ ++ + + +
Sbjct: 88 LNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 140
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAPEYVY 452
LH IIHRD+K NI++ ++ K+ DF AG T Y APE +
Sbjct: 141 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 197
Query: 453 SGVPSEKTDVYSFGVVALEVAAGK 476
E D++S G + E+ K
Sbjct: 198 GMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 32/204 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M C+ HKN++ L
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIISL 89
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ LV E L + +L +++ + L E+ ++ + + +
Sbjct: 90 LNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 142
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAPEYVY 452
LH IIHRD+K NI++ ++ K+ DF AG T Y APE +
Sbjct: 143 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 199
Query: 453 SGVPSEKTDVYSFGVVALEVAAGK 476
E D++S G + E+ K
Sbjct: 200 GMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 32/204 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M C+ HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIISL 88
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ LV E L + +L +++ + L E+ ++ + + +
Sbjct: 89 LNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 141
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAPEYVY 452
LH IIHRD+K NI++ ++ K+ DF AG T Y APE +
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 453 SGVPSEKTDVYSFGVVALEVAAGK 476
E D++S G + E+ K
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 32/204 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M C+ HKN++ L
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIISL 126
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ LV E L + +L +++ + L E+ ++ + + +
Sbjct: 127 LNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 179
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAPEYVY 452
LH IIHRD+K NI++ ++ K+ DF AG T Y APE +
Sbjct: 180 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 236
Query: 453 SGVPSEKTDVYSFGVVALEVAAGK 476
E D++S G + E+ K
Sbjct: 237 GMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 32/204 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M C+ HKN++ L
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIISL 81
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ LV E L + +L +++ + L E+ ++ + + +
Sbjct: 82 LNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 134
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAPEYVY 452
LH IIHRD+K NI++ ++ K+ DF AG T Y APE +
Sbjct: 135 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 191
Query: 453 SGVPSEKTDVYSFGVVALEVAAGK 476
E D++S G + E+ K
Sbjct: 192 GMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 95/231 (41%), Gaps = 43/231 (18%)
Query: 273 RLALTDIKQATLGFNKNRIVGEGASATVYKGSLPSGGAV-AVKRFEKP-----NRVECAR 326
R+ LTD FN ++G+G+ V + AVK +K + VEC
Sbjct: 16 RMKLTD-------FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECT- 67
Query: 327 NPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSL----DKILHNNSSSSI 382
E +A + L QL + L V EY+ G L ++ ++
Sbjct: 68 ---MVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAV 124
Query: 383 VLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-------- 434
+ E +A L +L + II+RD+K N++LD+E + K+ DF
Sbjct: 125 FYAAE--------IAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173
Query: 435 ---EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
GT Y+APE + + D ++FGV+ E+ AG++P + +
Sbjct: 174 DGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 224
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 32/203 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M + HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK-VVNHKNIIGL 88
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ +V E L + +L +++ + L E+ ++ + + +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQ------MELDHERMSYLLYQMLVGIKH 141
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAPEYVY 452
LH IIHRD+K NI++ ++ K+ DF AG T Y APE +
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 453 SGVPSEKTDVYSFGVVALEVAAG 475
E D++S GV+ E+ G
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 25/209 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTE----FATMAGCLRHKNLVQ 347
+G G A V K S G +F K R + +R + E ++ ++H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 348 LQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
L +++L+ E + G L L S L+ E+ + + + + YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 132
Query: 408 ERQIIHRDVKACNI-LLDAEF---NAKLGDF----------EATIPAGTMGYLAPEYVYS 453
QI H D+K NI LLD K+ DF E GT ++APE V
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNY 191
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ D++S GV+ + +G SP D
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGD 220
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 32/204 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M C+ HKN++ L
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIISL 82
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ LV E L + +L +++ + L E+ ++ + + +
Sbjct: 83 LNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 135
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAPEYVY 452
LH IIHRD+K NI++ ++ K+ DF AG T Y APE +
Sbjct: 136 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 192
Query: 453 SGVPSEKTDVYSFGVVALEVAAGK 476
E D++S G + E+ K
Sbjct: 193 GMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 32/203 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M + HKN++ L
Sbjct: 32 IGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK-VVNHKNIIGL 88
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ +V E L + +L +++ + L E+ ++ + + +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQ------MELDHERMSYLLYQMLVGIKH 141
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAPEYVY 452
LH IIHRD+K NI++ ++ K+ DF AG T Y APE +
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 453 SGVPSEKTDVYSFGVVALEVAAG 475
E D++S GV+ E+ G
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 26/158 (16%)
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVL-GVAS 398
+H N++ L+ +G + LV E + G L DKIL S E+ + VL +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFS------EREASFVLHTIGK 132
Query: 399 ALSYLHEECERQIIHRDVKACNIL-LDAEFNA---KLGDFE-----------ATIPAGTM 443
+ YLH + ++HRD+K NIL +D N ++ DF P T
Sbjct: 133 TVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA 189
Query: 444 GYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
++APE + E D++S G++ + AG +P N
Sbjct: 190 NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN 227
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 26/158 (16%)
Query: 341 RHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVL-GVAS 398
+H N++ L+ +G + LV E + G L DKIL S E+ + VL +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFS------EREASFVLHTIGK 132
Query: 399 ALSYLHEECERQIIHRDVKACNIL-LDAEFNA---KLGDFE-----------ATIPAGTM 443
+ YLH + ++HRD+K NIL +D N ++ DF P T
Sbjct: 133 TVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA 189
Query: 444 GYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
++APE + E D++S G++ + AG +P N
Sbjct: 190 NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN 227
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 26/153 (16%)
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSL----DKILHNNSSSSIVLSWEKRLNIVLGVASAL 400
L QL + L V EY+ G L ++ ++ + E +A L
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAE--------IAIGL 455
Query: 401 SYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAGTMGYLAPE 449
+L + II+RD+K N++LD+E + K+ DF GT Y+APE
Sbjct: 456 FFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPE 512
Query: 450 YVYSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ + D ++FGV+ E+ AG++P + +
Sbjct: 513 IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 545
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 32/204 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M C+ HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIIGL 88
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ +V E L + +L +++ + L E+ ++ + + +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 141
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGTMGYLAPEYV--YSGVPS--- 457
LH IIHRD+K NI++ ++ K+ DF AGT + PE V Y P
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVIL 198
Query: 458 -----EKTDVYSFGVVALEVAAGK 476
E D++S G + E+ K
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 86/210 (40%), Gaps = 27/210 (12%)
Query: 292 VGEGASATVYKGSLPSGG-----AVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLV 346
+G G A V K S G KR + +R R E + + L H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL-HPNII 78
Query: 347 QLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEE 406
L ++VL+ E + G L L S LS E+ + + + ++YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEEATSFIKQILDGVNYLHT- 133
Query: 407 CERQIIHRDVKACNI-LLDAEF---NAKLGDF----------EATIPAGTMGYLAPEYVY 452
++I H D+K NI LLD + KL DF E GT ++APE V
Sbjct: 134 --KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 453 SGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ D++S GV+ + +G SP D
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGD 221
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 24/201 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRF-EKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+G GA V++ + G V V +F P ++ + E + M L H L+ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD--KYTVKNEISIM-NQLHHPKLINLHD 115
Query: 351 WCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECER 409
+ E+VL+ E+L G L D+I ++ +S + +N + L ++HE
Sbjct: 116 AFEDKYEMVLILEFLSGGELFDRI----AAEDYKMSEAEVINYMRQACEGLKHMHEHS-- 169
Query: 410 QIIHRDVKACNILLDAE--FNAKLGDFE----------ATIPAGTMGYLAPEYVYSGVPS 457
I+H D+K NI+ + + + K+ DF + T + APE V
Sbjct: 170 -IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVG 228
Query: 458 EKTDVYSFGVVALEVAAGKSP 478
TD+++ GV+ + +G SP
Sbjct: 229 FYTDMWAIGVLGYVLLSGLSP 249
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F++ + +G G+ V SG A+K +K V+ + T + +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY+ G + L S + IVL YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+L+D + ++ DF GT YLAP + S
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPAIILSKGY 215
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 25/209 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTE----FATMAGCLRHKNLVQ 347
+G G A V K S G +F K R + +R + E ++ ++H N++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 348 LQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
L +++L+ E + G L L S L+ E+ + + + + YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 132
Query: 408 ERQIIHRDVKACNI-LLDAEF---NAKLGDF----------EATIPAGTMGYLAPEYVYS 453
QI H D+K NI LLD K+ DF E GT ++APE V
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ D++S GV+ + +G SP D
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGD 220
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Query: 391 NIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLG------DFEATIP---AG 441
I+LG L ++H R +++RD+K NILLD + ++ DF P G
Sbjct: 300 EIILG----LEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 352
Query: 442 TMGYLAPEYVYSGVPSEKT-DVYSFGVVALEVAAGKSP 478
T GY+APE + GV + + D +S G + ++ G SP
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Query: 391 NIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLG------DFEATIP---AG 441
I+LG L ++H R +++RD+K NILLD + ++ DF P G
Sbjct: 300 EIILG----LEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 352
Query: 442 TMGYLAPEYVYSGVPSEKT-DVYSFGVVALEVAAGKSP 478
T GY+APE + GV + + D +S G + ++ G SP
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 32/203 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M C+ HKN++ L
Sbjct: 34 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIIGL 90
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ +V E L + +L +++ + L E+ ++ + + +
Sbjct: 91 LNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 143
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAPEYVY 452
LH IIHRD+K NI++ ++ K+ DF AG T Y APE +
Sbjct: 144 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVIL 200
Query: 453 SGVPSEKTDVYSFGVVALEVAAG 475
E D++S G + E+ G
Sbjct: 201 GMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Query: 391 NIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLG------DFEATIP---AG 441
I+LG L ++H R +++RD+K NILLD + ++ DF P G
Sbjct: 300 EIILG----LEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 352
Query: 442 TMGYLAPEYVYSGVPSEKT-DVYSFGVVALEVAAGKSP 478
T GY+APE + GV + + D +S G + ++ G SP
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 32/203 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M C+ HKN++ L
Sbjct: 33 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIIGL 89
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ +V E L + +L +++ + L E+ ++ + + +
Sbjct: 90 LNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 142
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAPEYVY 452
LH IIHRD+K NI++ ++ K+ DF AG T Y APE +
Sbjct: 143 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 199
Query: 453 SGVPSEKTDVYSFGVVALEVAAG 475
E D++S G + E+ G
Sbjct: 200 GMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Query: 391 NIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLG------DFEATIP---AG 441
I+LG L ++H R +++RD+K NILLD + ++ DF P G
Sbjct: 299 EIILG----LEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 351
Query: 442 TMGYLAPEYVYSGVPSEKT-DVYSFGVVALEVAAGKSP 478
T GY+APE + GV + + D +S G + ++ G SP
Sbjct: 352 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 32/203 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M C+ HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIIGL 88
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ +V E L + +L +++ + L E+ ++ + + +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 141
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAPEYVY 452
LH IIHRD+K NI++ ++ K+ DF AG T Y APE +
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 453 SGVPSEKTDVYSFGVVALEVAAG 475
E D++S G + E+ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 83/205 (40%), Gaps = 25/205 (12%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEF----ATMAGCLRHKNLVQ 347
+G G A V K G +F K R+ +R + E + +RH N++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 348 LQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
L ++VL+ E + G L L S L+ ++ + + + YLH
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKES----LTEDEATQFLKQILDGVHYLHS-- 126
Query: 408 ERQIIHRDVKACNI-LLDAEF---NAKLGDF----------EATIPAGTMGYLAPEYVYS 453
++I H D+K NI LLD KL DF E GT ++APE V
Sbjct: 127 -KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNY 185
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSP 478
+ D++S GV+ + +G SP
Sbjct: 186 EPLGLEADMWSIGVITYILLSGASP 210
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 32/203 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M C+ HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIIGL 88
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ +V E L + +L +++ + L E+ ++ + + +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 141
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAPEYVY 452
LH IIHRD+K NI++ ++ K+ DF AG T Y APE +
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 453 SGVPSEKTDVYSFGVVALEVAAG 475
E D++S G + E+ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 89/215 (41%), Gaps = 29/215 (13%)
Query: 280 KQATLGFNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGC 339
+Q + + +++G G+ V++ L VA+K+ + R F +
Sbjct: 36 EQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR-------FKNRELQIMRI 88
Query: 340 LRHKNLVQLQGWCCEGNE------LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIV 393
++H N+V L+ + + L LV EY+P H + +L +
Sbjct: 89 VKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKL-YM 147
Query: 394 LGVASALSYLHEECERQIIHRDVKACNILLDAEFNA-KLGDFEAT--IPAG--------T 442
+ +L+Y+H I HRD+K N+LLD KL DF + + AG +
Sbjct: 148 YQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICS 204
Query: 443 MGYLAPEYVYSGVP-SEKTDVYSFGVVALEVAAGK 476
Y APE ++ + D++S G V E+ G+
Sbjct: 205 RYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 83/205 (40%), Gaps = 25/205 (12%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEF----ATMAGCLRHKNLVQ 347
+G G A V K G +F K R+ +R + E + +RH N++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 348 LQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
L ++VL+ E + G L L S L+ ++ + + + YLH
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAEKES----LTEDEATQFLKQILDGVHYLHS-- 133
Query: 408 ERQIIHRDVKACNI-LLDAEF---NAKLGDF----------EATIPAGTMGYLAPEYVYS 453
++I H D+K NI LLD KL DF E GT ++APE V
Sbjct: 134 -KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNY 192
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSP 478
+ D++S GV+ + +G SP
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASP 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 25/209 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTE----FATMAGCLRHKNLVQ 347
+G G A V K S G +F K R + +R + E ++ ++H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 348 LQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
L +++L+ E + G L L S L+ E+ + + + + YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 132
Query: 408 ERQIIHRDVKACNI-LLDAEF---NAKLGDF----------EATIPAGTMGYLAPEYVYS 453
QI H D+K NI LLD K+ DF E GT ++APE V
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ D++S GV+ + +G SP D
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGD 220
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 25/209 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTE----FATMAGCLRHKNLVQ 347
+G G A V K S G +F K R + +R + E ++ ++H N++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 348 LQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
L +++L+ E + G L L S L+ E+ + + + + YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 132
Query: 408 ERQIIHRDVKACNI-LLDAEF---NAKLGDF----------EATIPAGTMGYLAPEYVYS 453
QI H D+K NI LLD K+ DF E GT ++APE V
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ D++S GV+ + +G SP D
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGD 220
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 25/209 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTE----FATMAGCLRHKNLVQ 347
+G G A V K S G +F K R + +R + E ++ ++H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 348 LQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
L +++L+ E + G L L S L+ E+ + + + + YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 132
Query: 408 ERQIIHRDVKACNI-LLDAEF---NAKLGDF----------EATIPAGTMGYLAPEYVYS 453
QI H D+K NI LLD K+ DF E GT ++APE V
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ D++S GV+ + +G SP D
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGD 220
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 25/209 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTE----FATMAGCLRHKNLVQ 347
+G G A V K S G +F K R + +R + E ++ ++H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 348 LQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
L +++L+ E + G L L S L+ E+ + + + + YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 132
Query: 408 ERQIIHRDVKACNI-LLDAEF---NAKLGDF----------EATIPAGTMGYLAPEYVYS 453
QI H D+K NI LLD K+ DF E GT ++APE V
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ D++S GV+ + +G SP D
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGD 220
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 25/209 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTE----FATMAGCLRHKNLVQ 347
+G G A V K S G +F K R + +R + E ++ ++H N++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 348 LQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
L +++L+ E + G L L S L+ E+ + + + + YLH
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 131
Query: 408 ERQIIHRDVKACNI-LLDAEF---NAKLGDF----------EATIPAGTMGYLAPEYVYS 453
QI H D+K NI LLD K+ DF E GT ++APE V
Sbjct: 132 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 190
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ D++S GV+ + +G SP D
Sbjct: 191 EPLGLEADMWSIGVITYILLSGASPFLGD 219
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 83/205 (40%), Gaps = 25/205 (12%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEF----ATMAGCLRHKNLVQ 347
+G G A V K G +F K R+ +R + E + +RH N++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 348 LQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
L ++VL+ E + G L L S L+ ++ + + + YLH
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAEKES----LTEDEATQFLKQILDGVHYLHS-- 147
Query: 408 ERQIIHRDVKACNI-LLDAEF---NAKLGDF----------EATIPAGTMGYLAPEYVYS 453
++I H D+K NI LLD KL DF E GT ++APE V
Sbjct: 148 -KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNY 206
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSP 478
+ D++S GV+ + +G SP
Sbjct: 207 EPLGLEADMWSIGVITYILLSGASP 231
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 25/209 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTE----FATMAGCLRHKNLVQ 347
+G G A V K S G +F K R + +R + E ++ ++H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 348 LQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
L +++L+ E + G L L S L+ E+ + + + + YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 132
Query: 408 ERQIIHRDVKACNI-LLDAEF---NAKLGDF----------EATIPAGTMGYLAPEYVYS 453
QI H D+K NI LLD K+ DF E GT ++APE V
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ D++S GV+ + +G SP D
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGD 220
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 25/209 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTE----FATMAGCLRHKNLVQ 347
+G G A V K S G +F K R + +R + E ++ ++H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 348 LQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
L +++L+ E + G L L S L+ E+ + + + + YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 132
Query: 408 ERQIIHRDVKACNI-LLDAEF---NAKLGDF----------EATIPAGTMGYLAPEYVYS 453
QI H D+K NI LLD K+ DF E GT ++APE V
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ D++S GV+ + +G SP D
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGD 220
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 25/209 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTE----FATMAGCLRHKNLVQ 347
+G G A V K S G +F K R + +R + E ++ ++H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 348 LQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
L +++L+ E + G L L S L+ E+ + + + + YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 132
Query: 408 ERQIIHRDVKACNI-LLDAEF---NAKLGDF----------EATIPAGTMGYLAPEYVYS 453
QI H D+K NI LLD K+ DF E GT ++APE V
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ D++S GV+ + +G SP D
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGD 220
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 25/209 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTE----FATMAGCLRHKNLVQ 347
+G G A V K S G +F K R + +R + E ++ ++H N++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 348 LQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
L +++L+ E + G L L S L+ E+ + + + + YLH
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 131
Query: 408 ERQIIHRDVKACNI-LLDAEF---NAKLGDF----------EATIPAGTMGYLAPEYVYS 453
QI H D+K NI LLD K+ DF E GT ++APE V
Sbjct: 132 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 190
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ D++S GV+ + +G SP D
Sbjct: 191 EPLGLEADMWSIGVITYILLSGASPFLGD 219
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 32/204 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M C+ HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIIGL 88
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ +V E L + +L +++ + L E+ ++ + + +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 141
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGTMGYLAPEYV--YSGVPS--- 457
LH IIHRD+K NI++ ++ K+ DF AGT + PE V Y P
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVIL 198
Query: 458 -----EKTDVYSFGVVALEVAAGK 476
E D++S G + E+ K
Sbjct: 199 GMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 25/209 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTE----FATMAGCLRHKNLVQ 347
+G G A V K S G +F K R + +R + E ++ ++H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 348 LQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
L +++L+ E + G L L S L+ E+ + + + + YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 132
Query: 408 ERQIIHRDVKACNI-LLDAEF---NAKLGDF----------EATIPAGTMGYLAPEYVYS 453
QI H D+K NI LLD K+ DF E GT ++APE V
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ D++S GV+ + +G SP D
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGD 220
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 28/207 (13%)
Query: 286 FNKNRIVGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
+ + + +G GA V G VAVK+ +P + + E + C+ HKN
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLK-CVNHKN 84
Query: 345 LVQL------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVAS 398
++ L Q E ++ LV E L + +L +++H + L E+ ++ +
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIH------MELDHERMSYLLYQMLC 137
Query: 399 ALSYLHEECERQIIHRDVKACNILLDAEFNAKLGD----------FEATIPAGTMGYLAP 448
+ +LH IIHRD+K NI++ ++ K+ D F T T Y AP
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAP 194
Query: 449 EYVYSGVPSEKTDVYSFGVVALEVAAG 475
E + + D++S G + E+ G
Sbjct: 195 EVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 38/199 (19%)
Query: 306 PSGGAVAVKRFEKPNRVECARNPFTTEFA---TMAGCLRHKNLVQLQGWCCEGNELVLVY 362
P+G V V+R +E N T ++ H N+V + NEL +V
Sbjct: 34 PTGEYVTVRRI----NLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT 89
Query: 363 EYLPNGSLDKIL---HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKAC 419
++ GS ++ + + + +++ I+ GV AL Y+H +HR VKA
Sbjct: 90 SFMAYGSAKDLICTHFMDGMNELAIAY-----ILQGVLKALDYIHH---MGYVHRSVKAS 141
Query: 420 NILLDAEFNAKLGDFEATIPAGTMG------------------YLAPEYVYSGVP--SEK 459
+IL+ + L + + + G +L+PE + + K
Sbjct: 142 HILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAK 201
Query: 460 TDVYSFGVVALEVAAGKSP 478
+D+YS G+ A E+A G P
Sbjct: 202 SDIYSVGITACELANGHVP 220
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 38/199 (19%)
Query: 306 PSGGAVAVKRFEKPNRVECARNPFTTEFA---TMAGCLRHKNLVQLQGWCCEGNELVLVY 362
P+G V V+R +E N T ++ H N+V + NEL +V
Sbjct: 50 PTGEYVTVRRI----NLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT 105
Query: 363 EYLPNGSLDKIL---HNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKAC 419
++ GS ++ + + + +++ I+ GV AL Y+H +HR VKA
Sbjct: 106 SFMAYGSAKDLICTHFMDGMNELAIAY-----ILQGVLKALDYIHH---MGYVHRSVKAS 157
Query: 420 NILLDAEFNAKLGDFEATIPAGTMG------------------YLAPEYVYSGVPS--EK 459
+IL+ + L + + + G +L+PE + + K
Sbjct: 158 HILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAK 217
Query: 460 TDVYSFGVVALEVAAGKSP 478
+D+YS G+ A E+A G P
Sbjct: 218 SDIYSVGITACELANGHVP 236
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 396 VASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA----------GTMGY 445
+ L LH E +I++RD+K NILLD + ++ D + GT+GY
Sbjct: 295 ICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGY 351
Query: 446 LAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
+APE V + + D ++ G + E+ AG+SP
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 396 VASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPA----------GTMGY 445
+ L LH E +I++RD+K NILLD + ++ D + GT+GY
Sbjct: 295 ICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGY 351
Query: 446 LAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
+APE V + + D ++ G + E+ AG+SP
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 32/204 (15%)
Query: 292 VGEGASATVYKGSLP-SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+G GA++ VY+ + A+K +K + R TE + L H N+++L+
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVR----TEIGVLLR-LSHPNIIKLKE 115
Query: 351 WCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECER 409
E+ LV E + G L D+I+ S + V + A++YLHE
Sbjct: 116 IFETPTEISLVLELVTGGELFDRIVEKGYYSE-----RDAADAVKQILEAVAYLHEN--- 167
Query: 410 QIIHRDVKACNILL-----DAEFNAKLGDFEAT----------IPAGTMGYLAPEYVYSG 454
I+HRD+K N+L DA K+ DF + GT GY APE +
Sbjct: 168 GIVHRDLKPENLLYATPAPDAPL--KIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGC 225
Query: 455 VPSEKTDVYSFGVVALEVAAGKSP 478
+ D++S G++ + G P
Sbjct: 226 AYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 32/204 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M + HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK-XVNHKNIISL 88
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ LV E L + +L +++ + L E+ ++ + + +
Sbjct: 89 LNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQ------MELDHERMSYLLYQMLXGIKH 141
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAPEYVY 452
LH IIHRD+K NI++ ++ K+ DF AG T Y APE +
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 453 SGVPSEKTDVYSFGVVALEVAAGK 476
E D++S G + E+ K
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 25/209 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTE----FATMAGCLRHKNLVQ 347
+G G A V K S G +F K R + +R + E ++ ++H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 348 LQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
L +++L+ E + G L L S L+ E+ + + + + YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 132
Query: 408 ERQIIHRDVKACNI-LLDAEF---NAKLGDF----------EATIPAGTMGYLAPEYVYS 453
QI H D+K NI LLD K+ DF E GT ++APE V
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ D++S GV+ + +G SP D
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGD 220
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 16/211 (7%)
Query: 286 FNKNRIVGEGASATVY-KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F++ + +G G+ V SG A+K +K V+ + T + +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
LV+L+ + + L +V EY+ G + L S + IVL YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVP 456
+I+RD+K N+L+D + ++ DF GT LAPE + S
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIILSKGY 215
Query: 457 SEKTDVYSFGVVALEVAAGKSPVDNDGCVIV 487
++ D ++ GV+ E+AAG P D + +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 44/183 (24%)
Query: 384 LSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF--------- 434
++ E ++ VA + +L R+ IHRD+ A NILL K+ DF
Sbjct: 196 ITMEDLISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKN 252
Query: 435 -------EATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEV-AAGKSP-----VDN 481
+ +P + ++APE ++ + S K+DV+S+GV+ E+ + G SP +D
Sbjct: 253 PDYVRKGDTRLP---LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDE 309
Query: 482 DGCVIVDWVWNLRKKGKLLDAADFRLRGKFNRKEMERMLMVGLSCVHPNHEKRPSVKEAA 541
D C + ++G + A ++ + + L C H + ++RP E
Sbjct: 310 DFCSRL-------REGMRMRAPEY---------STPEIYQIMLDCWHRDPKERPRFAELV 353
Query: 542 RIL 544
L
Sbjct: 354 EKL 356
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 19/201 (9%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+G G A V + S +G A K +K R + R E A + ++ L
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96
Query: 351 WCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQ 410
+E++L+ EY G + + + ++S + ++ + + YLH+
Sbjct: 97 VYENTSEIILILEYAAGGEIFSLCLPELAE--MVSENDVIRLIKQILEGVYYLHQ---NN 151
Query: 411 IIHRDVKACNILLDAEF---NAKLGDF----------EATIPAGTMGYLAPEYVYSGVPS 457
I+H D+K NILL + + + K+ DF E GT YLAPE + +
Sbjct: 152 IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPIT 211
Query: 458 EKTDVYSFGVVALEVAAGKSP 478
TD+++ G++A + SP
Sbjct: 212 TATDMWNIGIIAYMLLTHTSP 232
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 29/201 (14%)
Query: 292 VGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFAT----MAGCLRHKNLV 346
+GEG+ V+K + +G VA+K+F +E +P + A M L+H NLV
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKF-----LESEDDPVIKKIALREIRMLKQLKHPNLV 65
Query: 347 QLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEE 406
L L LV+EY + +LH + +I A+++ H+
Sbjct: 66 NLLEVFRRKRRLHLVFEYCDHT----VLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH 121
Query: 407 CERQIIHRDVKACNILLDAEFNAKLGDF----EATIPA-------GTMGYLAPEYVYSGV 455
IHRDVK NIL+ KL DF T P+ T Y +PE +
Sbjct: 122 ---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDT 178
Query: 456 P-SEKTDVYSFGVVALEVAAG 475
DV++ G V E+ +G
Sbjct: 179 QYGPPVDVWAIGCVFAELLSG 199
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 90/222 (40%), Gaps = 47/222 (21%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKR-FEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQ 349
+G+GA V+K +G VAVK+ F+ A+ F E + H+N+V L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLL 75
Query: 350 GWCCEGNE--LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
N+ + LV++Y+ LH ++I+ K+ +V + + YLH
Sbjct: 76 NVLRADNDRDVYLVFDYMETD-----LHAVIRANILEPVHKQY-VVYQLIKVIKYLHSGG 129
Query: 408 ERQIIHRDVKACNILLDAEFNAKLGDF------------EATIP---------------- 439
++HRD+K NILL+AE + K+ DF IP
Sbjct: 130 ---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 440 ----AGTMGYLAPEYVYSGVPSEK-TDVYSFGVVALEVAAGK 476
T Y APE + K D++S G + E+ GK
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 32/204 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M + HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKX-VNHKNIISL 88
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ LV E L + +L +++ + L E+ ++ + + +
Sbjct: 89 LNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQ------MELDHERMSYLLYQMLCGIKH 141
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAPEYVY 452
LH IIHRD+K NI++ ++ K+ DF AG T Y APE +
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 453 SGVPSEKTDVYSFGVVALEVAAGK 476
E D++S G + E+ K
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 32/204 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M C+ HKN++ L
Sbjct: 37 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIIGL 93
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ +V E L + +L +++ + L E+ ++ + + +
Sbjct: 94 LNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 146
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAPEYVY 452
LH IIHRD+K NI++ ++ K+ DF AG T Y APE +
Sbjct: 147 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 203
Query: 453 SGVPSEKTDVYSFGVVALEVAAGK 476
E D++S G + E+ K
Sbjct: 204 GMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 25/209 (11%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTE----FATMAGCLRHKNLVQ 347
+G G A V K S G +F K R + +R + E ++ ++H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 348 LQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEEC 407
L +++L+ E + G L L S L+ E+ + + + + YLH
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 132
Query: 408 ERQIIHRDVKACNI-LLDAEF---NAKLGDF----------EATIPAGTMGYLAPEYVYS 453
QI H D+K NI LLD K+ DF E GT ++APE V
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ D++S GV+ + +G SP D
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGD 220
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 28/206 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+GEG VYK + VA+KR + E E + + L+H+N+++L+
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKE-LQHRNIIELKS 100
Query: 351 WCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQ 410
+ L L++EY N L K + N S+ + ++ GV ++ H R+
Sbjct: 101 VIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGV----NFCH---SRR 152
Query: 411 IIHRDVKACNILLDAEFNA-----KLGDF-----------EATIPAGTMGYLAPEYVY-S 453
+HRD+K N+LL + K+GDF + T T+ Y PE + S
Sbjct: 153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGS 212
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPV 479
S D++S + E+ K+P+
Sbjct: 213 RHYSTSVDIWSIACIWAEMLM-KTPL 237
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 93/237 (39%), Gaps = 46/237 (19%)
Query: 271 PMRLALTDIKQATLGFNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECAR--NP 328
P + +++ F +++G GA G VAV + + R+ + N
Sbjct: 77 PFTQLVKEMQLHREDFEIIKVIGRGAF-----------GEVAVVKMKNTERIYAMKILNK 125
Query: 329 FTTEFATMAGCLRHKNLVQLQGWCC----------EGNELVLVYEYLPNGSLDKILHNNS 378
+ C R + V + G C + N L LV +Y G L +L S
Sbjct: 126 WEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLL---S 182
Query: 379 SSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---- 434
L + + + A+ +H+ +HRD+K N+LLD + +L DF
Sbjct: 183 KFEDKLPEDMARFYIGEMVLAIDSIHQ---LHYVHRDIKPDNVLLDVNGHIRLADFGSCL 239
Query: 435 --------EATIPAGTMGYLAPEYVYS-----GVPSEKTDVYSFGVVALEVAAGKSP 478
++++ GT Y++PE + + G + D +S GV E+ G++P
Sbjct: 240 KMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+V+L G C+ L+LV E G L K L V + + L+ V+ + YL
Sbjct: 72 IVRLIG-VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLH---QVSMGMKYLE 127
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT--------------MGYLAPEY 450
E + +HRD+ A N+LL AK+ DF + G + + APE
Sbjct: 128 E---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC 184
Query: 451 VYSGVPSEKTDVYSFGVVALE-VAAGKSP 478
+ S ++DV+S+GV E ++ G+ P
Sbjct: 185 INFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 90/241 (37%), Gaps = 46/241 (19%)
Query: 279 IKQATLGFNKNRIVGEGASATVYKGS-LPSGGAVAVKRF----EKPNRVECARNPFTTEF 333
++ L R++ EG A VY+ + SG A+KR E+ NR E
Sbjct: 23 VELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRA------IIQEV 76
Query: 334 ATMAGCLRHKNLVQLQGWCCEGNEL-------VLVYEYLPNGSLDKILHNNSSSSIVLSW 386
M H N+VQ G E L+ L G L + L S LS
Sbjct: 77 CFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRG-PLSC 135
Query: 387 EKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF------------ 434
+ L I A+ ++H + + IIHRD+K N+LL + KL DF
Sbjct: 136 DTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDY 194
Query: 435 -----------EATIPAGTMGYLAPEYV--YSGVP-SEKTDVYSFGVVALEVAAGKSPVD 480
E T Y PE + YS P EK D+++ G + + + P +
Sbjct: 195 SWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE 254
Query: 481 N 481
+
Sbjct: 255 D 255
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 32/203 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M + HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK-VVNHKNIIGL 88
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ +V E L + +L +++ + L E+ ++ + + +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQ------MELDHERMSYLLYQMLVGIKH 141
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAPEYVY 452
LH IIHRD+K NI++ ++ K+ DF AG T Y APE +
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 453 SGVPSEKTDVYSFGVVALEVAAG 475
E D++S G + E+ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 93/237 (39%), Gaps = 46/237 (19%)
Query: 271 PMRLALTDIKQATLGFNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECAR--NP 328
P + +++ F +++G GA G VAV + + R+ + N
Sbjct: 61 PFTQLVKEMQLHREDFEIIKVIGRGAF-----------GEVAVVKMKNTERIYAMKILNK 109
Query: 329 FTTEFATMAGCLRHKNLVQLQGWCC----------EGNELVLVYEYLPNGSLDKILHNNS 378
+ C R + V + G C + N L LV +Y G L +L S
Sbjct: 110 WEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLL---S 166
Query: 379 SSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF---- 434
L + + + A+ +H+ +HRD+K N+LLD + +L DF
Sbjct: 167 KFEDKLPEDMARFYIGEMVLAIDSIHQ---LHYVHRDIKPDNVLLDVNGHIRLADFGSCL 223
Query: 435 --------EATIPAGTMGYLAPEYVYS-----GVPSEKTDVYSFGVVALEVAAGKSP 478
++++ GT Y++PE + + G + D +S GV E+ G++P
Sbjct: 224 KMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 32/204 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M C+ HKN++ L
Sbjct: 26 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIIGL 82
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ +V E L + +L +++ + L E+ ++ + + +
Sbjct: 83 LNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 135
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAPEYVY 452
LH IIHRD+K NI++ ++ K+ DF AG T Y APE +
Sbjct: 136 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 192
Query: 453 SGVPSEKTDVYSFGVVALEVAAGK 476
E D++S G + E+ K
Sbjct: 193 GMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 30/221 (13%)
Query: 284 LGFNKNRIVGEGASATVYKGSL-PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRH 342
+ + +++G G+ VY+ L SG VA+K+ + R F + L H
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDH 72
Query: 343 KNLVQLQGWCCEGNE------LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
N+V+L+ + E L LV +Y+P H + + + +L + +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 131
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNA-KLGDF---------EATIPA-GTMGY 445
+L+Y+H I HRD+K N+LLD + KL DF E + + Y
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 188
Query: 446 LAPEYVYSGVP-SEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
APE ++ + DV+S G V E+ G+ D V
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 30/221 (13%)
Query: 284 LGFNKNRIVGEGASATVYKGSL-PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRH 342
+ + +++G G+ VY+ L SG VA+K+ + R F + L H
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDH 72
Query: 343 KNLVQLQGWCCEGNE------LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
N+V+L+ + E L LV +Y+P H + + + +L + +
Sbjct: 73 CNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 131
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNA-KLGDF---------EATIPA-GTMGY 445
+L+Y+H I HRD+K N+LLD + KL DF E + + Y
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 188
Query: 446 LAPEYVYSGVP-SEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
APE ++ + DV+S G V E+ G+ D V
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 30/221 (13%)
Query: 284 LGFNKNRIVGEGASATVYKGSL-PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRH 342
+ + +++G G+ VY+ L SG VA+K+ + R F + L H
Sbjct: 21 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDH 73
Query: 343 KNLVQLQGWCCEGNE------LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
N+V+L+ + E L LV +Y+P H + + + +L + +
Sbjct: 74 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 132
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNA-KLGDF---------EATIPA-GTMGY 445
+L+Y+H I HRD+K N+LLD + KL DF E + + Y
Sbjct: 133 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 189
Query: 446 LAPEYVYSGVP-SEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
APE ++ + DV+S G V E+ G+ D V
Sbjct: 190 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 230
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 30/221 (13%)
Query: 284 LGFNKNRIVGEGASATVYKGSL-PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRH 342
+ + +++G G+ VY+ L SG VA+K+ + R F + L H
Sbjct: 39 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDH 91
Query: 343 KNLVQLQGWCCEGNE------LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
N+V+L+ + E L LV +Y+P H + + + +L + +
Sbjct: 92 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQL 150
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNA-KLGDF---------EATIPA-GTMGY 445
+L+Y+H I HRD+K N+LLD + KL DF E + + Y
Sbjct: 151 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 207
Query: 446 LAPEYVYSGVP-SEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
APE ++ + DV+S G V E+ G+ D V
Sbjct: 208 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 248
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 23/160 (14%)
Query: 334 ATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNI 392
A + L+H N+V+L E LV++ + G L + I+ S S +
Sbjct: 81 ARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HC 135
Query: 393 VLGVASALSYLHEECERQIIHRDVKACNILLDAEFN---AKLGDFEATIP---------- 439
+ + +++++H+ I+HRD+K N+LL ++ KL DF I
Sbjct: 136 IHQILESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG 192
Query: 440 -AGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
AGT GYL+PE + + D+++ GV+ + G P
Sbjct: 193 FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 30/221 (13%)
Query: 284 LGFNKNRIVGEGASATVYKGSL-PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRH 342
+ + +++G G+ VY+ L SG VA+K+ + R F + L H
Sbjct: 28 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDH 80
Query: 343 KNLVQLQGWCCEGNE------LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
N+V+L+ + E L LV +Y+P H + + + +L + +
Sbjct: 81 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQL 139
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNA-KLGDF---------EATIPA-GTMGY 445
+L+Y+H I HRD+K N+LLD + KL DF E + + Y
Sbjct: 140 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 196
Query: 446 LAPEYVYSGVP-SEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
APE ++ + DV+S G V E+ G+ D V
Sbjct: 197 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 237
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 30/221 (13%)
Query: 284 LGFNKNRIVGEGASATVYKGSL-PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRH 342
+ + +++G G+ VY+ L SG VA+K+ + R F + L H
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDH 72
Query: 343 KNLVQLQGWCCEGNE------LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
N+V+L+ + E L LV +Y+P H + + + +L + +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 131
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNA-KLGDF---------EATIP-AGTMGY 445
+L+Y+H I HRD+K N+LLD + KL DF E + + Y
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 188
Query: 446 LAPEYVYSGVP-SEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
APE ++ + DV+S G V E+ G+ D V
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 30/221 (13%)
Query: 284 LGFNKNRIVGEGASATVYKGSL-PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRH 342
+ + +++G G+ VY+ L SG VA+K+ + R F + L H
Sbjct: 32 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDH 84
Query: 343 KNLVQLQGWCCEGNE------LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
N+V+L+ + E L LV +Y+P H + + + +L + +
Sbjct: 85 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 143
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNA-KLGDF---------EATIPA-GTMGY 445
+L+Y+H I HRD+K N+LLD + KL DF E + + Y
Sbjct: 144 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 200
Query: 446 LAPEYVYSGVP-SEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
APE ++ + DV+S G V E+ G+ D V
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 241
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 30/221 (13%)
Query: 284 LGFNKNRIVGEGASATVYKGSL-PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRH 342
+ + +++G G+ VY+ L SG VA+K+ + R F + L H
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDH 72
Query: 343 KNLVQLQGWCCEGNE------LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
N+V+L+ + E L LV +Y+P H + + + +L + +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 131
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNA-KLGDF---------EATIPA-GTMGY 445
+L+Y+H I HRD+K N+LLD + KL DF E + + Y
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 188
Query: 446 LAPEYVYSGVP-SEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
APE ++ + DV+S G V E+ G+ D V
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 32/203 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M + HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK-VVNHKNIIGL 88
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ +V E L + +L +++ + L E+ ++ + + +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQ------MELDHERMSYLLYQMLCGIKH 141
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAPEYVY 452
LH IIHRD+K NI++ ++ K+ DF AG T Y APE +
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 453 SGVPSEKTDVYSFGVVALEVAAG 475
E D++S G + E+ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 30/221 (13%)
Query: 284 LGFNKNRIVGEGASATVYKGSL-PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRH 342
+ + +++G G+ VY+ L SG VA+K+ + R F + L H
Sbjct: 24 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDH 76
Query: 343 KNLVQLQGWCCEGNE------LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
N+V+L+ + E L LV +Y+P H + + + +L + +
Sbjct: 77 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 135
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNA-KLGDF---------EATIPA-GTMGY 445
+L+Y+H I HRD+K N+LLD + KL DF E + + Y
Sbjct: 136 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 192
Query: 446 LAPEYVYSGVP-SEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
APE ++ + DV+S G V E+ G+ D V
Sbjct: 193 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 233
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 30/221 (13%)
Query: 284 LGFNKNRIVGEGASATVYKGSL-PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRH 342
+ + +++G G+ VY+ L SG VA+K+ + R F + L H
Sbjct: 32 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDH 84
Query: 343 KNLVQLQGWCCEGNE------LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
N+V+L+ + E L LV +Y+P H + + + +L + +
Sbjct: 85 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQL 143
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNA-KLGDF---------EATIPA-GTMGY 445
+L+Y+H I HRD+K N+LLD + KL DF E + + Y
Sbjct: 144 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 200
Query: 446 LAPEYVYSGVP-SEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
APE ++ + DV+S G V E+ G+ D V
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 241
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 30/221 (13%)
Query: 284 LGFNKNRIVGEGASATVYKGSL-PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRH 342
+ + +++G G+ VY+ L SG VA+K+ + R F + L H
Sbjct: 33 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDH 85
Query: 343 KNLVQLQGWCCEGNE------LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
N+V+L+ + E L LV +Y+P H + + + +L + +
Sbjct: 86 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQL 144
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNA-KLGDF---------EATIP-AGTMGY 445
+L+Y+H I HRD+K N+LLD + KL DF E + + Y
Sbjct: 145 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 201
Query: 446 LAPEYVYSGVP-SEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
APE ++ + DV+S G V E+ G+ D V
Sbjct: 202 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 242
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 30/221 (13%)
Query: 284 LGFNKNRIVGEGASATVYKGSL-PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRH 342
+ + +++G G+ VY+ L SG VA+K+ + R F + L H
Sbjct: 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDH 106
Query: 343 KNLVQLQGWCCEGNE------LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
N+V+L+ + E L LV +Y+P H + + + +L + +
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQL 165
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNA-KLGDF---------EATIPA-GTMGY 445
+L+Y+H I HRD+K N+LLD + KL DF E + + Y
Sbjct: 166 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 222
Query: 446 LAPEYVYSGVP-SEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
APE ++ + DV+S G V E+ G+ D V
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 263
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 91/225 (40%), Gaps = 32/225 (14%)
Query: 266 TVQRVPMRLALTDIKQATLGFNKNRIVGEGASATV---YKGSLPSGGAVAVKRFEKP-NR 321
TV VP RL R VG GA +V Y L VAVK+ +P
Sbjct: 22 TVWEVPQRL------------QGLRPVGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQS 67
Query: 322 VECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSS 381
+ AR + + L+H+N++ L + E +L NN S
Sbjct: 68 LIHARRTYRE--LRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKS 125
Query: 382 IVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF------- 434
LS E +V + L Y+H IIHRD+K N+ ++ + ++ DF
Sbjct: 126 QALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQAD 182
Query: 435 -EATIPAGTMGYLAPEYVYSGVPSEKT-DVYSFGVVALEVAAGKS 477
E T T Y APE + + + +T D++S G + E+ GK+
Sbjct: 183 EEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|3ZVX|A Chain A, Structure Of The Lectin From Platypodium Elegans In
Complex With A Trimannoside
pdb|3ZVX|B Chain B, Structure Of The Lectin From Platypodium Elegans In
Complex With A Trimannoside
pdb|3ZYR|A Chain A, Structure Of The Lectin From Platypodium Elegans In
Complex With Heptasaccharide
pdb|3ZYR|B Chain B, Structure Of The Lectin From Platypodium Elegans In
Complex With Heptasaccharide
Length = 261
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 79/202 (39%), Gaps = 51/202 (25%)
Query: 3 DPKTNTTASFSCRFSFSIIPSPLCAFGDGFAFLITSNADSF--GNDNGYMGLPGPVLSPQ 60
+ TN A+ +FSF + SPL DG AF I + G+ G +GL P +
Sbjct: 69 EKSTNRVANLQTQFSF-FLSSPLSNPADGIAFFIAPPDTTIPSGSAGGLLGLFNPRTALN 127
Query: 61 DS---FFAVEFDTSF-------DPSLXXXXXXXXXXXXXXXXXXXXXDALSRGIDLKS-- 108
+S AVEFDT F DP+ GID+ S
Sbjct: 128 ESANQVLAVEFDTFFAQNSNTWDPNYQHI-----------------------GIDVNSIR 164
Query: 109 -----------GRHITTWIEYRDSLKLIRVWAGYSQIRPPSPLIIAQIDLSKQFKDYMHV 157
G+ + + Y S + I V A Y + + +DL+ +++ V
Sbjct: 165 SSKVVRWERREGKTLNVLVTYNPSTRTIDVVATYPDGQRYQ--LSHVVDLTTILPEWVRV 222
Query: 158 GFSAANGQGSAIYTVDRWRFKT 179
GFSAA+G+ + ++ W F +
Sbjct: 223 GFSAASGEQFQTHNLESWSFTS 244
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 32/204 (15%)
Query: 292 VGEGASATV---YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA V Y L VA+K+ +P + + E M + HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKX-VNHKNIISL 88
Query: 349 ------QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
Q E ++ LV E L + +L +++ + L E+ ++ + + +
Sbjct: 89 LNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 141
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAG----------TMGYLAPEYVY 452
LH IIHRD+K NI++ ++ K+ DF AG T Y APE +
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 453 SGVPSEKTDVYSFGVVALEVAAGK 476
E D++S G + E+ K
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 30/221 (13%)
Query: 284 LGFNKNRIVGEGASATVYKGSL-PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRH 342
+ + +++G G+ VY+ L SG VA+K+ + R F + L H
Sbjct: 48 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDH 100
Query: 343 KNLVQLQGWCCEGNE------LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
N+V+L+ + E L LV +Y+P H + + + +L + +
Sbjct: 101 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQL 159
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNA-KLGDF---------EATIP-AGTMGY 445
+L+Y+H I HRD+K N+LLD + KL DF E + + Y
Sbjct: 160 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 216
Query: 446 LAPEYVYSGVP-SEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
APE ++ + DV+S G V E+ G+ D V
Sbjct: 217 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 257
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 94/234 (40%), Gaps = 49/234 (20%)
Query: 277 TDIKQATL---GFNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECAR--NPFTT 331
+ +KQ L F +++G GA G VAV + + ++V + N +
Sbjct: 64 SKVKQMRLHREDFEILKVIGRGAF-----------GEVAVVKLKNADKVFAMKILNKWEM 112
Query: 332 EFATMAGCLRHKNLVQLQG---WCC-------EGNELVLVYEYLPNGSLDKILHNNSSSS 381
C R + V + G W + N L LV +Y G L +L S
Sbjct: 113 LKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLL---SKFE 169
Query: 382 IVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF------- 434
L E + + A+ +H+ +HRD+K NIL+D + +L DF
Sbjct: 170 DRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLM 226
Query: 435 -----EATIPAGTMGYLAPEYVYS-----GVPSEKTDVYSFGVVALEVAAGKSP 478
++++ GT Y++PE + + G + D +S GV E+ G++P
Sbjct: 227 EDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 30/221 (13%)
Query: 284 LGFNKNRIVGEGASATVYKGSL-PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRH 342
+ + +++G G+ VY+ L SG VA+K+ + R F + L H
Sbjct: 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDH 106
Query: 343 KNLVQLQGWCCEGNE------LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
N+V+L+ + E L LV +Y+P H + + + +L + +
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQL 165
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNA-KLGDF---------EATIP-AGTMGY 445
+L+Y+H I HRD+K N+LLD + KL DF E + + Y
Sbjct: 166 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 222
Query: 446 LAPEYVYSGVP-SEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
APE ++ + DV+S G V E+ G+ D V
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 263
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 30/221 (13%)
Query: 284 LGFNKNRIVGEGASATVYKGSL-PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRH 342
+ + +++G G+ VY+ L SG VA+K+ + R F + L H
Sbjct: 56 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDH 108
Query: 343 KNLVQLQGWCCEGNE------LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
N+V+L+ + E L LV +Y+P H + + + +L + +
Sbjct: 109 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQL 167
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNA-KLGDF---------EATIP-AGTMGY 445
+L+Y+H I HRD+K N+LLD + KL DF E + + Y
Sbjct: 168 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 224
Query: 446 LAPEYVYSGVP-SEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
APE ++ + DV+S G V E+ G+ D V
Sbjct: 225 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 265
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 30/221 (13%)
Query: 284 LGFNKNRIVGEGASATVYKGSL-PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRH 342
+ + +++G G+ VY+ L SG VA+K+ + R F + L H
Sbjct: 58 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDH 110
Query: 343 KNLVQLQGWCCEGNE------LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
N+V+L+ + E L LV +Y+P H + + + +L + +
Sbjct: 111 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQL 169
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNA-KLGDF---------EATIP-AGTMGY 445
+L+Y+H I HRD+K N+LLD + KL DF E + + Y
Sbjct: 170 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 226
Query: 446 LAPEYVYSGVP-SEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
APE ++ + DV+S G V E+ G+ D V
Sbjct: 227 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 267
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 30/221 (13%)
Query: 284 LGFNKNRIVGEGASATVYKGSL-PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRH 342
+ + +++G G+ VY+ L SG VA+K+ + R F + L H
Sbjct: 25 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDH 77
Query: 343 KNLVQLQGWCCEGNE------LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
N+V+L+ + E L LV +Y+P H + + + +L + +
Sbjct: 78 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQL 136
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNA-KLGDF---------EATIP-AGTMGY 445
+L+Y+H I HRD+K N+LLD + KL DF E + + Y
Sbjct: 137 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 193
Query: 446 LAPEYVYSGVP-SEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
APE ++ + DV+S G V E+ G+ D V
Sbjct: 194 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 234
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 30/221 (13%)
Query: 284 LGFNKNRIVGEGASATVYKGSL-PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRH 342
+ + +++G G+ VY+ L SG VA+K+ + R F + L H
Sbjct: 99 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDH 151
Query: 343 KNLVQLQGWCCEGNE------LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
N+V+L+ + E L LV +Y+P H + + + +L + +
Sbjct: 152 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQL 210
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNA-KLGDF---------EATIP-AGTMGY 445
+L+Y+H I HRD+K N+LLD + KL DF E + + Y
Sbjct: 211 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 267
Query: 446 LAPEYVYSGVP-SEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
APE ++ + DV+S G V E+ G+ D V
Sbjct: 268 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 308
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 26/209 (12%)
Query: 286 FNKNRIVGEGASATVY--KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
+ + + +G GA V K L +G A+K +K + + + + + L H
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHP 64
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
N+++L + + LV E G L D+I+ S + + I+ V S +Y
Sbjct: 65 NIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-----IMKQVLSGTTY 119
Query: 403 LHEECERQIIHRDVKACNILLDAEFN---AKLGDF----------EATIPAGTMGYLAPE 449
LH+ I+HRD+K N+LL+++ K+ DF + GT Y+APE
Sbjct: 120 LHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPE 176
Query: 450 YVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
V EK DV+S GV+ + G P
Sbjct: 177 -VLRKKYDEKCDVWSCGVILYILLCGYPP 204
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 26/209 (12%)
Query: 286 FNKNRIVGEGASATVY--KGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHK 343
+ + + +G GA V K L +G A+K +K + + + + + L H
Sbjct: 23 YQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHP 81
Query: 344 NLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
N+++L + + LV E G L D+I+ S + + I+ V S +Y
Sbjct: 82 NIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAA-----VIMKQVLSGTTY 136
Query: 403 LHEECERQIIHRDVKACNILLDAEFN---AKLGDF----------EATIPAGTMGYLAPE 449
LH+ I+HRD+K N+LL+++ K+ DF + GT Y+APE
Sbjct: 137 LHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPE 193
Query: 450 YVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
V EK DV+S GV+ + G P
Sbjct: 194 -VLRKKYDEKCDVWSCGVILYILLCGYPP 221
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 86
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L NN S L+ + ++ + L Y+
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADL-----NNIVKSQKLTDDHVQFLIYQILRGLKYI 141
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 30/204 (14%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 86
Query: 349 QGWCC------EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
E N++ LV +L L+ I+ + + + ++ + L Y
Sbjct: 87 LDVFTPARSLEEFNDVYLV-THLMGADLNNIVKXQKLTDDHVQF-----LIYQILRGLKY 140
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSG 454
+H IIHRD+K N+ ++ + K+ DF E T T Y APE + +
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 455 VPSEKT-DVYSFGVVALEVAAGKS 477
+ +T D++S G + E+ G++
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 73/172 (42%), Gaps = 25/172 (14%)
Query: 326 RNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVL 384
R+P T E + +H N++ L+ +G + +V E + G L DKIL
Sbjct: 60 RDP-TEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK-----FF 113
Query: 385 SWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNIL-LDAEFN---AKLGDFE----- 435
S + ++ + + YLH + ++HRD+K NIL +D N ++ DF
Sbjct: 114 SEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170
Query: 436 ------ATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
P T ++APE + D++S GV+ + G +P N
Sbjct: 171 RAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFAN 222
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 22/153 (14%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVAS 398
L+H N+V+L E + LV++ + G L + I+ S S + + +
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILE 115
Query: 399 ALSYLHEECERQIIHRDVKACNILLDAEFN---AKLGDFEATIP----------AGTMGY 445
+++Y H I+HR++K N+LL ++ KL DF I AGT GY
Sbjct: 116 SIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY 172
Query: 446 LAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
L+PE + S+ D+++ GV+ + G P
Sbjct: 173 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 22/153 (14%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVAS 398
L+H N+V+L E + LV++ + G L + I+ S S + + +
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILE 116
Query: 399 ALSYLHEECERQIIHRDVKACNILLDAEFN---AKLGDFEATIP----------AGTMGY 445
+++Y H I+HR++K N+LL ++ KL DF I AGT GY
Sbjct: 117 SIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY 173
Query: 446 LAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
L+PE + S+ D+++ GV+ + G P
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 22/153 (14%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVAS 398
L+H N+V+L E + LV++ + G L + I+ S S + + +
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILE 139
Query: 399 ALSYLHEECERQIIHRDVKACNILLDAEFNA---KLGDFEATIP----------AGTMGY 445
+++Y H I+HR++K N+LL ++ KL DF I AGT GY
Sbjct: 140 SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY 196
Query: 446 LAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
L+PE + S+ D+++ GV+ + G P
Sbjct: 197 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 22/153 (14%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVAS 398
L+H N+V+L E + LV++ + G L + I+ S S + + +
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILE 116
Query: 399 ALSYLHEECERQIIHRDVKACNILLDAEFN---AKLGDFEATIP----------AGTMGY 445
+++Y H I+HR++K N+LL ++ KL DF I AGT GY
Sbjct: 117 SIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY 173
Query: 446 LAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
L+PE + S+ D+++ GV+ + G P
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 23/160 (14%)
Query: 334 ATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNI 392
A + L+H N+V+L E L+++ + G L + I+ S S +
Sbjct: 72 ARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS-----HC 126
Query: 393 VLGVASALSYLHEECERQIIHRDVKACNILLDAEFNA---KLGDFEATIP---------- 439
+ + A+ + H+ ++HRD+K N+LL ++ KL DF I
Sbjct: 127 IQQILEAVLHCHQ---MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG 183
Query: 440 -AGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
AGT GYL+PE + + D+++ GV+ + G P
Sbjct: 184 FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 48/226 (21%)
Query: 290 RIVGEGASATV-YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+I+G G+S TV ++GS G VAVKR + + A E + H N+++
Sbjct: 39 KILGYGSSGTVVFQGSF-QGRPVAVKRM-LIDFCDIA----LMEIKLLTESDDHPNVIRY 92
Query: 349 QGWCCEGNELVL-VYEYLPNGSLDKILHNNSSSSIVLSWEKRLN---IVLGVASALSYLH 404
+C E + L + L N +L ++ + + S L +K N ++ +AS +++LH
Sbjct: 93 --YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 150
Query: 405 EECERQIIHRDVKACNILL--DAEFNAK-----------LGDF---------------EA 436
+IIHRD+K NIL+ + F A + DF
Sbjct: 151 S---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 207
Query: 437 TIPAGTMGYLAPEYVYSGVPSEKT---DVYSFGVVALEV-AAGKSP 478
P+GT G+ APE + T D++S G V + + GK P
Sbjct: 208 NNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 48/226 (21%)
Query: 290 RIVGEGASATV-YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+I+G G+S TV ++GS G VAVKR + + A E + H N+++
Sbjct: 39 KILGYGSSGTVVFQGSF-QGRPVAVKRM-LIDFCDIA----LMEIKLLTESDDHPNVIRY 92
Query: 349 QGWCCEGNELVL-VYEYLPNGSLDKILHNNSSSSIVLSWEKRLN---IVLGVASALSYLH 404
+C E + L + L N +L ++ + + S L +K N ++ +AS +++LH
Sbjct: 93 --YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 150
Query: 405 EECERQIIHRDVKACNILL--DAEFNAK-----------LGDF---------------EA 436
+IIHRD+K NIL+ + F A + DF
Sbjct: 151 S---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 207
Query: 437 TIPAGTMGYLAPEYVYSGVPSEKT---DVYSFGVVALEV-AAGKSP 478
P+GT G+ APE + T D++S G V + + GK P
Sbjct: 208 NNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 82
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L NN L+ + ++ + L Y+
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGADL-----NNIVKCAKLTDDHVQFLIYQILRGLKYI 137
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 138 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 194
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGRT 217
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 78/190 (41%), Gaps = 34/190 (17%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLP 366
+G AVK+ R+E R E AG L +V L G EG + + E L
Sbjct: 98 TGFQCAVKKV----RLEVFR---AEELMACAG-LTSPRIVPLYGAVREGPWVNIFMELLE 149
Query: 367 NGSLDKILHNNSSSSIVLSWEKRLNIVLGVA-SALSYLHEECERQIIHRDVKACNILLDA 425
GSL +++ E R LG A L YLH R+I+H DVKA N+LL +
Sbjct: 150 GGSLGQLVKEQGCLP-----EDRALYYLGQALEGLEYLHS---RRILHGDVKADNVLLSS 201
Query: 426 E-FNAKLGDFEATIP----------------AGTMGYLAPEYVYSGVPSEKTDVYSFGVV 468
+ +A L DF + GT ++APE V K DV+S +
Sbjct: 202 DGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCM 261
Query: 469 ALEVAAGKSP 478
L + G P
Sbjct: 262 MLHMLNGCHP 271
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 65/158 (41%), Gaps = 26/158 (16%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+V+ + L ++ EY G L + + N S ++ + S
Sbjct: 73 LRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGR----FSEDEARFFFQQLLSG 128
Query: 400 LSYLHEECERQIIHRDVKACNILLDAE--FNAKLGDF----------EATIPAGTMGYLA 447
+SY H QI HRD+K N LLD K+ DF + GT Y+A
Sbjct: 129 VSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIA 185
Query: 448 PEYV----YSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
PE + Y G + DV+S GV + G P ++
Sbjct: 186 PEVLLRQEYDG---KIADVWSCGVTLYVMLVGAYPFED 220
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 78/190 (41%), Gaps = 34/190 (17%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLP 366
+G AVK+ R+E R E AG L +V L G EG + + E L
Sbjct: 117 TGFQCAVKKV----RLEVFR---AEELMACAG-LTSPRIVPLYGAVREGPWVNIFMELLE 168
Query: 367 NGSLDKILHNNSSSSIVLSWEKRLNIVLGVA-SALSYLHEECERQIIHRDVKACNILLDA 425
GSL +++ E R LG A L YLH R+I+H DVKA N+LL +
Sbjct: 169 GGSLGQLVKEQGCLP-----EDRALYYLGQALEGLEYLHS---RRILHGDVKADNVLLSS 220
Query: 426 E-FNAKLGDFEATIP----------------AGTMGYLAPEYVYSGVPSEKTDVYSFGVV 468
+ +A L DF + GT ++APE V K DV+S +
Sbjct: 221 DGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCM 280
Query: 469 ALEVAAGKSP 478
L + G P
Sbjct: 281 MLHMLNGCHP 290
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 30/204 (14%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 86
Query: 349 QGWCC------EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
E N++ LV +L L+ I+ + + + ++ + L Y
Sbjct: 87 LDVFTPARSLEEFNDVYLV-THLMGADLNNIVKXQKLTDDHVQF-----LIYQILRGLKY 140
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSG 454
+H IIHRD+K N+ ++ + K+ DF E T T Y APE + +
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 455 VPSEKT-DVYSFGVVALEVAAGKS 477
+ +T D++S G + E+ G++
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+V+L G C+ L+LV E G L K L V + + L+ V+ + YL
Sbjct: 398 IVRLIG-VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLH---QVSMGMKYLE 453
Query: 405 EECERQIIHRDVKACNILLDAEFNAKLGDFEATIPAGT--------------MGYLAPEY 450
E + +HR++ A N+LL AK+ DF + G + + APE
Sbjct: 454 E---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC 510
Query: 451 VYSGVPSEKTDVYSFGVVALE-VAAGKSP 478
+ S ++DV+S+GV E ++ G+ P
Sbjct: 511 INFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 86
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 141
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNAM 198
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ KP + + R T + ++H+N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKR---TYRELRLLKHMKHENVIGL 98
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 99 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 153
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 154 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 210
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGRT 233
>pdb|3IPV|A Chain A, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
pdb|3IPV|C Chain C, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
Length = 251
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 3 DPKTNTTASFSCRFSFSIIPSPLCAFGDGFAFLITSNADSFGNDNGYMGLPGPVLSPQD- 61
D T ASF+ F F+I + DG AF + A + + G++GL +S
Sbjct: 61 DSATGLVASFATSFRFTIYAPNIATIADGLAFFLAPVASAPDSGGGFLGLFDSAVSGSTY 120
Query: 62 SFFAVEFDTSFDPSLXXXXXXXXXXXXXXXXXXXXXDALSRGIDLKSGRHITTWIEYRDS 121
AVEFDT ++ ++ S L +G I Y +
Sbjct: 121 QTVAVEFDT-YENTVFTDPPYTHIGFDVNSISSIKTVKWS----LANGEAAKVLITYNSA 175
Query: 122 LKLIRVWAGYSQIRPPS--PLIIAQI-DLSKQFKDYMHVGFSAANG-QGSAIYTVD--RW 175
+KL+ S + P S I+A I DLS +++ VGFSAA G G I T D W
Sbjct: 176 VKLLVA----SLVYPSSKTSFILADIVDLSSVLPEWVRVGFSAATGASGGKIETHDVFSW 231
Query: 176 RFKT 179
F +
Sbjct: 232 SFAS 235
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 86
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 141
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPEIMLNWM 198
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 82
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 137
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 138 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 194
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGRT 217
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 86/207 (41%), Gaps = 37/207 (17%)
Query: 292 VGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
VG G+ V++ +G AVK+ R+E R E AG L +V L G
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKV----RLEVFR---VEELVACAG-LSSPRIVPLYG 117
Query: 351 WCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVA-SALSYLHEECER 409
EG + + E L GSL +++ E R LG A L YLH R
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLIKQMGCLP-----EDRALYYLGQALEGLEYLHT---R 169
Query: 410 QIIHRDVKACNILLDAEFN-AKLGDFEAT-----------------IPAGTMGYLAPEYV 451
+I+H DVKA N+LL ++ + A L DF IP GT ++APE V
Sbjct: 170 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP-GTETHMAPEVV 228
Query: 452 YSGVPSEKTDVYSFGVVALEVAAGKSP 478
K D++S + L + G P
Sbjct: 229 MGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 30/204 (14%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 86
Query: 349 QGWCC------EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
E N++ LV +L L+ I+ + + + ++ + L Y
Sbjct: 87 LDVFTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKY 140
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSG 454
+H IIHRD+K N+ ++ + K+ DF E T T Y APE + +
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 455 VPSEKT-DVYSFGVVALEVAAGKS 477
+ +T D++S G + E+ G++
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 23/160 (14%)
Query: 334 ATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNI 392
A + L+H N+V+L E LV++ + G L + I+ S S +
Sbjct: 54 ARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HC 108
Query: 393 VLGVASALSYLHEECERQIIHRDVKACNILLDAEFN---AKLGDFEATIP---------- 439
+ + A+ + H+ ++HRD+K N+LL ++ KL DF I
Sbjct: 109 IQQILEAVLHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG 165
Query: 440 -AGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
AGT GYL+PE + + D+++ GV+ + G P
Sbjct: 166 FAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 86/207 (41%), Gaps = 37/207 (17%)
Query: 292 VGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
VG G+ V++ +G AVK+ R+E R E AG L +V L G
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKV----RLEVFR---VEELVACAG-LSSPRIVPLYG 133
Query: 351 WCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVA-SALSYLHEECER 409
EG + + E L GSL +++ E R LG A L YLH R
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLIKQMGCLP-----EDRALYYLGQALEGLEYLHT---R 185
Query: 410 QIIHRDVKACNILLDAEFN-AKLGDFEAT-----------------IPAGTMGYLAPEYV 451
+I+H DVKA N+LL ++ + A L DF IP GT ++APE V
Sbjct: 186 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP-GTETHMAPEVV 244
Query: 452 YSGVPSEKTDVYSFGVVALEVAAGKSP 478
K D++S + L + G P
Sbjct: 245 MGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 96
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 97 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 151
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 152 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 208
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 209 HYNQTVDIWSVGCIMAELLTGRT 231
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 28/233 (12%)
Query: 271 PMRLALTDIKQATLGFNKNRIVGEGASATVYKGSLPSGGAV-AVKRFEKPNRVECAR-NP 328
P+ + L +++ F +++G GA + V + G V A+K K + ++ +
Sbjct: 48 PIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSC 107
Query: 329 FTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEK 388
F E + R + + QL + N L LV EY G L +L + E
Sbjct: 108 FREERDVLVNGDR-RWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGER---IPAEM 163
Query: 389 RLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF------------EA 436
+ + A+ +H +HRD+K NILLD + +L DF +
Sbjct: 164 ARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRS 220
Query: 437 TIPAGTMGYLAPEYVYS-------GVPSEKTDVYSFGVVALEVAAGKSPVDND 482
+ GT YL+PE + + G + D ++ GV A E+ G++P D
Sbjct: 221 LVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD 273
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 26/158 (16%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+V+ + L +V EY G L + + N S ++ + S
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR----FSEDEARFFFQQLISG 127
Query: 400 LSYLHEECERQIIHRDVKACNILLDAE--FNAKLGDF---EATI-------PAGTMGYLA 447
+SY H Q+ HRD+K N LLD K+ DF +A++ GT Y+A
Sbjct: 128 VSYAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIA 184
Query: 448 PEYV----YSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
PE + Y G + DV+S GV + G P ++
Sbjct: 185 PEVLLKKEYDG---KVADVWSCGVTLYVMLVGAYPFED 219
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 97
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 98 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 152
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 153 HSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 209
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 210 HYNQTVDIWSVGCIMAELLTGRT 232
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 86
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 141
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1FAY|A Chain A, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|B Chain B, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|C Chain C, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|D Chain D, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|E Chain E, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|F Chain F, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|G Chain G, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|H Chain H, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1F9K|A Chain A, Winged Bean Acidic Lectin Complexed With
Methyl-alpha-d-galactose
pdb|1F9K|B Chain B, Winged Bean Acidic Lectin Complexed With
Methyl-alpha-d-galactose
Length = 238
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 79/187 (42%), Gaps = 24/187 (12%)
Query: 3 DPKTNTTASFSCRFSFSII-PSPLCAFGDGFAFLITSNADSFGNDNGYMGLPGPVLSPQ- 60
D T ASF RFSF+I P DG F + G D G +G+ P P+
Sbjct: 60 DSTTGNVASFETRFSFNITQPYAYPEPADGLTFFMVPPNSPQGEDGGNLGVFKP---PEG 116
Query: 61 DSFFAVEFDT---SFDPSLXXXXXXXXXXXXXXXXXXXXXDALSRGIDLKSGRHITTWIE 117
D+ FAVEFDT ++DP + + + L++G I+
Sbjct: 117 DNAFAVEFDTFQNTWDPQV----------PHIGIDVNSIVSSKTLHFQLENGGVANVVIK 166
Query: 118 YRDSLKLIRVWAGYSQIRPPSPLIIAQIDLSKQF--KDYMHVGFSAANG-QGSAIYT--V 172
Y K++ V + + L +DL ++F ++++VG SA G Q +A+ T +
Sbjct: 167 YDSPTKILNVVLAFHSVGTVYTLSNI-VDLKQEFPNSEWVNVGLSATTGYQKNAVETHEI 225
Query: 173 DRWRFKT 179
W F +
Sbjct: 226 ISWSFTS 232
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 106
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 107 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 161
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 162 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 218
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGRT 241
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 30/204 (14%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 91
Query: 349 QGWCC------EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
E N++ LV +L L+ I+ + + + ++ + L Y
Sbjct: 92 LDVFTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKY 145
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSG 454
+H IIHRD+K N+ ++ + K+ DF E T T Y APE + +
Sbjct: 146 IHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 202
Query: 455 VPSEKT-DVYSFGVVALEVAAGKS 477
+ +T D++S G + E+ G++
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 30/204 (14%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 92
Query: 349 QGWCC------EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
E N++ LV +L L NN L+ + ++ + L Y
Sbjct: 93 LDVFTPARSLEEFNDVYLV-THLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSG 454
+H IIHRD+K N+ ++ + K+ DF E T T Y APE + +
Sbjct: 147 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 203
Query: 455 VPSEKT-DVYSFGVVALEVAAGKS 477
+ +T D++S G + E+ G++
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 105
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 106 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 160
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 161 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 217
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 218 HYNQTVDIWSVGCIMAELLTGRT 240
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 91/225 (40%), Gaps = 32/225 (14%)
Query: 266 TVQRVPMRLALTDIKQATLGFNKNRIVGEGASATV---YKGSLPSGGAVAVKRFEKP-NR 321
TV VP RL G R VG GA +V Y L VAVK+ +P
Sbjct: 14 TVWEVPQRLQ---------GL---RPVGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQS 59
Query: 322 VECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSS 381
+ AR + + L+H+N++ L + E +L NN
Sbjct: 60 LIHARRTYRE--LRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC 117
Query: 382 IVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF------- 434
LS E +V + L Y+H IIHRD+K N+ ++ + ++ DF
Sbjct: 118 QALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQAD 174
Query: 435 -EATIPAGTMGYLAPEYVYSGVPSEKT-DVYSFGVVALEVAAGKS 477
E T T Y APE + + + +T D++S G + E+ GK+
Sbjct: 175 EEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 219
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 90/225 (40%), Gaps = 32/225 (14%)
Query: 266 TVQRVPMRLALTDIKQATLGFNKNRIVGEGASATV---YKGSLPSGGAVAVKRFEKP-NR 321
TV VP RL R VG GA +V Y L VAVK+ +P
Sbjct: 22 TVWEVPQRL------------QGLRPVGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQS 67
Query: 322 VECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSS 381
+ AR + + L+H+N++ L + E +L NN
Sbjct: 68 LIHARRTYRE--LRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC 125
Query: 382 IVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF------- 434
LS E +V + L Y+H IIHRD+K N+ ++ + ++ DF
Sbjct: 126 QALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQAD 182
Query: 435 -EATIPAGTMGYLAPEYVYSGVPSEKT-DVYSFGVVALEVAAGKS 477
E T T Y APE + + + +T D++S G + E+ GK+
Sbjct: 183 EEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 83
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 84 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 138
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 139 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 195
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 196 HYNQTVDIWSVGCIMAELLTGRT 218
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 82
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 137
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 138 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 194
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGRT 217
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 292 VGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+G+GA + V + +P+G A K E A + L+H N+V+L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLERE-ARICRLLKHPNIVRLHD 70
Query: 351 WCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECER 409
E LV++ + G L + I+ S S + + + ++++ H
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILESVNHCHLN--- 122
Query: 410 QIIHRDVKACNILLDAEFN---AKLGDFEATIP-----------AGTMGYLAPEYVYSGV 455
I+HRD+K N+LL ++ KL DF I AGT GYL+PE +
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 456 PSEKTDVYSFGVVALEVAAGKSP 478
+ D+++ GV+ + G P
Sbjct: 183 YGKPVDMWACGVILYILLVGYPP 205
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 83
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 84 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 138
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 139 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 195
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 196 HYNQTVDIWSVGCIMAELLTGRT 218
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 84
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 85 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 139
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 140 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 196
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 197 HYNQTVDIWSVGCIMAELLTGRT 219
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 86
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 141
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 86
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 141
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 91
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 146
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 147 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 203
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 86
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 141
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 91
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 146
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 147 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 203
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 85
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 86 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 140
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 141 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 197
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 198 HYNQTVDIWSVGCIMAELLTGRT 220
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V + SG +AVK+ +P + + R T + ++H+N++ L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 115
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 116 LDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 170
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 171 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 227
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
T D++S G + E+ G++
Sbjct: 228 HYNMTVDIWSVGCIMAELLTGRT 250
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 89/204 (43%), Gaps = 30/204 (14%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
+G GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 91
Query: 349 QGWCC------EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
E N++ LV +L L+ I+ + + + ++ + L Y
Sbjct: 92 LDVFTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKY 145
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSG 454
+H IIHRD+K N+ ++ + K+ DF E T T Y APE + +
Sbjct: 146 IHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 202
Query: 455 VPSEKT-DVYSFGVVALEVAAGKS 477
+ +T D++S G + E+ G++
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 30/204 (14%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 88
Query: 349 QGWCC------EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
E N++ LV +L L+ I+ + + + ++ + L Y
Sbjct: 89 LDVFTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKY 142
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSG 454
+H IIHRD+K N+ ++ + K+ DF E T T Y APE + +
Sbjct: 143 IHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 199
Query: 455 VPSEKT-DVYSFGVVALEVAAGKS 477
+ +T D++S G + E+ G++
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 86
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 141
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 79/191 (41%), Gaps = 36/191 (18%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLP 366
+G AVK+ R+E R E AG L +V L G EG + + E L
Sbjct: 96 TGFQCAVKKV----RLEVFR---VEELVACAG-LSSPRIVPLYGAVREGPWVNIFMELLE 147
Query: 367 NGSLDKILHNNSSSSIVLSWEKRLNIVLGVA-SALSYLHEECERQIIHRDVKACNILLDA 425
GSL +++ E R LG A L YLH R+I+H DVKA N+LL +
Sbjct: 148 GGSLGQLIKQMGCLP-----EDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSS 199
Query: 426 EFN-AKLGDFEAT-----------------IPAGTMGYLAPEYVYSGVPSEKTDVYSFGV 467
+ + A L DF IP GT ++APE V K D++S
Sbjct: 200 DGSRAALCDFGHALCLQPDGLGKSLLTGDYIP-GTETHMAPEVVMGKPCDAKVDIWSSCC 258
Query: 468 VALEVAAGKSP 478
+ L + G P
Sbjct: 259 MMLHMLNGCHP 269
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 292 VGEGASATVYK-GSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+G+GA + V + +P+G A K E A + L+H N+V+L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLERE-ARICRLLKHPNIVRLHD 70
Query: 351 WCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECER 409
E LV++ + G L + I+ S S + + + ++++ H
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILESVNHCHLN--- 122
Query: 410 QIIHRDVKACNILLDAEFN---AKLGDFEATIP-----------AGTMGYLAPEYVYSGV 455
I+HRD+K N+LL ++ KL DF I AGT GYL+PE +
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 456 PSEKTDVYSFGVVALEVAAGKSP 478
+ D+++ GV+ + G P
Sbjct: 183 YGKPVDMWACGVILYILLVGYPP 205
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 86
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 141
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 25/156 (16%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+G+G V+K +G VA+K+ N E E + L+H+N+V L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQ-LLKHENVVNLIE 83
Query: 351 WC---------CEGNELVLVYEYLPN---GSLDKILHNNSSSSIVLSWEKRLNIVLGVAS 398
C C+G+ + LV+++ + G L +L + S I + LN
Sbjct: 84 ICRTKASPYNRCKGS-IYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN------- 135
Query: 399 ALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF 434
L Y+H +I+HRD+KA N+L+ + KL DF
Sbjct: 136 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADF 168
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 86
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 141
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 97
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 98 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 152
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 153 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 209
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 210 HYNQTVDIWSVGCIMAELLTGRT 232
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 106
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 107 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 161
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 162 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 218
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 86
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 141
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 88
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 143
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 144 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 200
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGRT 223
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 98
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 99 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 153
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 154 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 210
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGRT 233
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 98
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 99 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 153
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 154 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 210
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGRT 233
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 30/204 (14%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 92
Query: 349 QGWCC------EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
E N++ LV +L L+ I+ + + + ++ + L Y
Sbjct: 93 LDVFTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKY 146
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSG 454
+H IIHRD+K N+ ++ + K+ DF E T T Y APE + +
Sbjct: 147 IHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 203
Query: 455 VPSEKT-DVYSFGVVALEVAAGKS 477
+ +T D++S G + E+ G++
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 88
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 143
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 144 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 200
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGRT 223
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 105
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 106 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 160
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 161 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 217
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 218 HYNQTVDIWSVGCIMAELLTGRT 240
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 30/204 (14%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 92
Query: 349 QGWCC------EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
E N++ LV +L L NN L+ + ++ + L Y
Sbjct: 93 LDVFTPARSLEEFNDVYLV-THLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSG 454
+H IIHRD+K N+ ++ + K+ DF E T T Y APE + +
Sbjct: 147 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 203
Query: 455 VPSEKT-DVYSFGVVALEVAAGKS 477
+ +T D++S G + E+ G++
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 93
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 148
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 149 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 205
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRT 228
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 109
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 110 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 164
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 165 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 221
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 222 HYNQTVDIWSVGCIMAELLTGRT 244
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 25/156 (16%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+G+G V+K +G VA+K+ N E E + L+H+N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQ-LLKHENVVNLIE 84
Query: 351 WC---------CEGNELVLVYEYLPN---GSLDKILHNNSSSSIVLSWEKRLNIVLGVAS 398
C C+G+ + LV+++ + G L +L + S I + LN
Sbjct: 85 ICRTKASPYNRCKGS-IYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN------- 136
Query: 399 ALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF 434
L Y+H +I+HRD+KA N+L+ + KL DF
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADF 169
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 92
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 147
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 148 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 204
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGRT 227
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 88
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 143
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 144 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 200
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 23/160 (14%)
Query: 334 ATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVLSWEKRLNI 392
A + L+H N+V+L E L+++ + G L + I+ S S +
Sbjct: 61 ARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS-----HC 115
Query: 393 VLGVASALSYLHEECERQIIHRDVKACNILLDAEFN---AKLGDFEATIP---------- 439
+ + A+ + H+ ++HR++K N+LL ++ KL DF I
Sbjct: 116 IQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG 172
Query: 440 -AGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
AGT GYL+PE + + D+++ GV+ + G P
Sbjct: 173 FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 25/156 (16%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+G+G V+K +G VA+K+ N E E + L+H+N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQ-LLKHENVVNLIE 84
Query: 351 WC---------CEGNELVLVYEYLPN---GSLDKILHNNSSSSIVLSWEKRLNIVLGVAS 398
C C+G+ + LV+++ + G L +L + S I + LN
Sbjct: 85 ICRTKASPYNRCKGS-IYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN------- 136
Query: 399 ALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF 434
L Y+H +I+HRD+KA N+L+ + KL DF
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADF 169
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 93
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 148
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 149 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWM 205
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRT 228
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 93
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 148
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 149 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWM 205
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRT 228
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 93
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 148
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T T Y APE + + +
Sbjct: 149 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWM 205
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRT 228
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 30/221 (13%)
Query: 284 LGFNKNRIVGEGASATVYKGSL-PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRH 342
+ + +++G G+ VY+ L SG VA+K+ + F + L H
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------GKAFKNRELQIMRKLDH 72
Query: 343 KNLVQLQGWCCEGNE------LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
N+V+L+ + E L LV +Y+P ++ ++ + S + L + +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNA-KLGDF---------EATIPA-GTMGY 445
+L+Y+H I HRD+K N+LLD + KL DF E + + Y
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 188
Query: 446 LAPEYVYSGVP-SEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
APE ++ + DV+S G V E+ G+ D V
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 25/172 (14%)
Query: 326 RNPFTTEFATMAGCLRHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNNSSSSIVL 384
R+P T E + +H N++ L+ +G + +V E G L DKIL
Sbjct: 60 RDP-TEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQK-----FF 113
Query: 385 SWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNIL-LDAEFN---AKLGDFE----- 435
S + ++ + + YLH + ++HRD+K NIL +D N ++ DF
Sbjct: 114 SEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170
Query: 436 ------ATIPAGTMGYLAPEYVYSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
P T ++APE + D++S GV+ G +P N
Sbjct: 171 RAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFAN 222
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 65/158 (41%), Gaps = 26/158 (16%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+V+ + L +V EY G L + + N S ++ + S
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR----FSEDEARFFFQQLISG 127
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLG--DF----------EATIPAGTMGYLA 447
+SY H Q+ HRD+K N LLD +L DF + GT Y+A
Sbjct: 128 VSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIA 184
Query: 448 PEYV----YSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
PE + Y G + DV+S GV + G P ++
Sbjct: 185 PEVLLKKEYDG---KVADVWSCGVTLYVMLVGAYPFED 219
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 30/221 (13%)
Query: 284 LGFNKNRIVGEGASATVYKGSL-PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRH 342
+ + +++G G+ VY+ L SG VA+K+ + F + L H
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------GKAFKNRELQIMRKLDH 72
Query: 343 KNLVQLQGWCCEGNE------LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
N+V+L+ + E L LV +Y+P H + + + +L + +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 131
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNA-KLGDF---------EATIP-AGTMGY 445
+L+Y+H I HRD+K N+LLD + KL DF E + + Y
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 188
Query: 446 LAPEYVYSGVP-SEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
APE ++ + DV+S G V E+ G+ D V
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 30/221 (13%)
Query: 284 LGFNKNRIVGEGASATVYKGSL-PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRH 342
+ + +++G G+ VY+ L SG VA+K+ + F + L H
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------GKAFKNRELQIMRKLDH 72
Query: 343 KNLVQLQGWCCEGNE------LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGV 396
N+V+L+ + E L LV +Y+P H + + + +L + +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 131
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFNA-KLGDF---------EATIP-AGTMGY 445
+L+Y+H I HRD+K N+LLD + KL DF E + + Y
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 188
Query: 446 LAPEYVYSGVP-SEKTDVYSFGVVALEVAAGKSPVDNDGCV 485
APE ++ + DV+S G V E+ G+ D V
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 65/158 (41%), Gaps = 26/158 (16%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+V+ + L +V EY G L + + N S ++ + S
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR----FSEDEARFFFQQLISG 126
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKLG--DF----------EATIPAGTMGYLA 447
+SY H Q+ HRD+K N LLD +L DF + GT Y+A
Sbjct: 127 VSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIA 183
Query: 448 PEYV----YSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
PE + Y G + DV+S GV + G P ++
Sbjct: 184 PEVLLKKEYDG---KVADVWSCGVTLYVMLVGAYPFED 218
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 84/213 (39%), Gaps = 23/213 (10%)
Query: 291 IVGEGASATVYKGSLPSGG-AVAVKRFEKPNRVECARNPFTTEFATMAGCLRH-----KN 344
++G G +VY G S VA+K EK + P T L+
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L W + VL+ E P D L + + L E + V A+ + H
Sbjct: 71 VIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 405 EECERQIIHRDVKACNILLDAEF-NAKLGDFEA---------TIPAGTMGYLAPEYV-YS 453
++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 128 NXG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 184
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 217
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 85/203 (41%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 106
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 107 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 161
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T Y APE + + +
Sbjct: 162 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAPEIMLNWM 218
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 89/204 (43%), Gaps = 30/204 (14%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 86
Query: 349 QGWCC------EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
E N++ LV +L L+ I+ + + + ++ + L Y
Sbjct: 87 LDVFTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKY 140
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSG 454
+H IIHRD+K N+ ++ + K+ D+ E T T Y APE + +
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 455 VPSEKT-DVYSFGVVALEVAAGKS 477
+ +T D++S G + E+ G++
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 85/214 (39%), Gaps = 25/214 (11%)
Query: 291 IVGEGASATVYKGSLPSGG-AVAVKRFEKPNRVECARNPFTTEFATMAGCLRH-----KN 344
++G G +VY G S VA+K EK + P T L+
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 345 LVQLQGWCCEGNELVLVYEYL-PNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
+++L W + VL+ E + P L + + L E + V A+ +
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGA----LQEELARSFFWQVLEAVRHC 130
Query: 404 HEECERQIIHRDVKACNILLDAEF-NAKLGDFEA---------TIPAGTMGYLAPEYV-Y 452
H C ++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 131 HN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY 187
Query: 453 SGVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 188 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 221
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 291 IVGEGASATVYKGSLPSGG-AVAVKRFEKPNRVECARNPFTTEFATMAGCLRH-----KN 344
++G G +VY G S VA+K EK + P T L+
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L W + VL+ E P D L + + L E + V A+ + H
Sbjct: 76 VIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 405 EECERQIIHRDVKACNILLDAEF-NAKLGDFEA---------TIPAGTMGYLAPEYV-YS 453
C ++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 133 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 189
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 222
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 291 IVGEGASATVYKGSLPSGG-AVAVKRFEKPNRVECARNPFTTEFATMAGCLRH-----KN 344
++G G +VY G S VA+K EK + P T L+
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L W + VL+ E P D L + + L E + V A+ + H
Sbjct: 75 VIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH 131
Query: 405 EECERQIIHRDVKACNILLDAEF-NAKLGDFEA---------TIPAGTMGYLAPEYV-YS 453
C ++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 132 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 188
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 221
>pdb|1BJQ|A Chain A, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|B Chain B, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|C Chain C, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|D Chain D, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|E Chain E, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|F Chain F, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|G Chain G, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|H Chain H, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1LU2|A Chain A, Dolichos Biflorus Seed Lectin In Complex With The Blood
Group A Trisaccharide
pdb|1LU2|B Chain B, Dolichos Biflorus Seed Lectin In Complex With The Blood
Group A Trisaccharide
pdb|1LU1|A Chain A, The Structure Of The Dolichos Biflorus Seed Lectin In
Complex With The Forssman Disaccharide
Length = 253
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 67/167 (40%), Gaps = 16/167 (9%)
Query: 3 DPKTNTTASFSCRFSFSIIPSPLCAFGDGFAFLITSNADSFGNDNGYMGL-PGPVLSPQD 61
D T AS++ F+ I +F DG AF + + GY+G+ V +
Sbjct: 58 DKSTGAVASWATSFTVKISAPSKASFADGIAFALVPVGSEPRRNGGYLGVFDSDVYNNSA 117
Query: 62 SFFAVEFDT----SFDPSLXXXXXXXXXXXXXXXXXXXXXDALSRGIDLKSGRHITTWIE 117
AVEFDT +DPS+ + DL +G + I
Sbjct: 118 QTVAVEFDTLSNSGWDPSMKHIGIDVNSIKSIA----------TVSWDLANGENAEILIT 167
Query: 118 YRDSLKLIRVWAGYSQIRPPSPLIIAQIDLSKQFKDYMHVGFSAANG 164
Y + L+ V + R S ++ ++D++ + +Y+ VGFSA G
Sbjct: 168 YNAATSLL-VASLVHPSRRTSYILSERVDITNELPEYVSVGFSATTG 213
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 84/207 (40%), Gaps = 28/207 (13%)
Query: 292 VGEGASATVYKGSLP-SGGAVAVKRFEKPNRVECARNP-FTTEFATMAGCLRHKNLVQLQ 349
+G GA V +G VA+K+ PN + N T + +H N++ ++
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKI--PNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 119
Query: 350 GW---CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEE 406
E VY L ++ LH SS L+ E + + L Y+H
Sbjct: 120 DILRPTVPYGEFKSVYVVL--DLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA 177
Query: 407 CERQIIHRDVKACNILLDAEFNAKLGDFEA-----TIPA----------GTMGYLAPEYV 451
Q+IHRD+K N+L++ K+GDF T PA T Y APE +
Sbjct: 178 ---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 234
Query: 452 YS-GVPSEKTDVYSFGVVALEVAAGKS 477
S ++ D++S G + E+ A +
Sbjct: 235 LSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 85/203 (41%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 82
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 137
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T Y APE + + +
Sbjct: 138 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWM 194
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGRT 217
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 291 IVGEGASATVYKGSLPSGG-AVAVKRFEKPNRVECARNPFTTEFATMAGCLRH-----KN 344
++G G +VY G S VA+K EK + P T L+
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L W + VL+ E P D L + + L E + V A+ + H
Sbjct: 74 VIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH 130
Query: 405 EECERQIIHRDVKACNILLDAEF-NAKLGDFEA---------TIPAGTMGYLAPEYV-YS 453
C ++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 131 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 187
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 188 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 220
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 93/228 (40%), Gaps = 28/228 (12%)
Query: 276 LTDIKQATLGFNKNRIVGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFAT 335
L D+ F R++G+G +V + L VK K + + + EF
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 336 MAGCLR---HKNLVQLQGWCCEGNEL------VLVYEYLPNGSLDKILHNN--SSSSIVL 384
A C++ H ++ +L G +++ ++ +G L L + + L
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 385 SWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT--IPAGT 442
+ + ++ +A + YL R IHRD+ A N +L + + DF + I +G
Sbjct: 135 PLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
Query: 443 -----------MGYLAPEYVYSGVPSEKTDVYSFGVVALEVAA-GKSP 478
+ +LA E + + + +DV++FGV E+ G++P
Sbjct: 192 YYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 291 IVGEGASATVYKGSLPSGG-AVAVKRFEKPNRVECARNPFTTEFATMAGCLRH-----KN 344
++G G +VY G S VA+K EK + P T L+
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L W + VL+ E P D L + + L E + V A+ + H
Sbjct: 76 VIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 405 EECERQIIHRDVKACNILLDAEFNA-KLGDFEA---------TIPAGTMGYLAPEYV-YS 453
C ++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 133 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 189
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 222
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 85/203 (41%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 86
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 141
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T Y APE + + +
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWM 198
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 85/203 (41%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 86
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 141
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ DF E T Y APE + + +
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWM 198
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 291 IVGEGASATVYKGSLPSGG-AVAVKRFEKPNRVECARNPFTTEFATMAGCLRH-----KN 344
++G G +VY G S VA+K EK + P T L+
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L W + VL+ E P D L + + L E + V A+ + H
Sbjct: 71 VIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 405 EECERQIIHRDVKACNILLDAEF-NAKLGDFEA---------TIPAGTMGYLAPEYV-YS 453
C ++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 128 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 184
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 217
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 84/207 (40%), Gaps = 28/207 (13%)
Query: 292 VGEGASATVYKGSLP-SGGAVAVKRFEKPNRVECARNP-FTTEFATMAGCLRHKNLVQLQ 349
+G GA V +G VA+K+ PN + N T + +H N++ ++
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKI--PNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 120
Query: 350 GW---CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEE 406
E VY L ++ LH SS L+ E + + L Y+H
Sbjct: 121 DILRPTVPYGEFKSVYVVL--DLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA 178
Query: 407 CERQIIHRDVKACNILLDAEFNAKLGDFEA-----TIPA----------GTMGYLAPEYV 451
Q+IHRD+K N+L++ K+GDF T PA T Y APE +
Sbjct: 179 ---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 235
Query: 452 YS-GVPSEKTDVYSFGVVALEVAAGKS 477
S ++ D++S G + E+ A +
Sbjct: 236 LSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 82/199 (41%), Gaps = 21/199 (10%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+G G V++ S + +F K V+ + ++ RH+N++ L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVK---VKGTDQVLVKKEISILNIARHRNILHLHES 69
Query: 352 CCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQI 411
ELV+++E++ LD I ++S+ L+ + ++ V V AL +LH I
Sbjct: 70 FESMEELVMIFEFI--SGLD-IFERINTSAFELNEREIVSYVHQVCEALQFLHS---HNI 123
Query: 412 IHRDVKACNILLDAEFNA-----KLGDFEATIPAGTM-------GYLAPEYVYSGVPSEK 459
H D++ NI+ ++ + G P Y APE V S
Sbjct: 124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTA 183
Query: 460 TDVYSFGVVALEVAAGKSP 478
TD++S G + + +G +P
Sbjct: 184 TDMWSLGTLVYVLLSGINP 202
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 291 IVGEGASATVYKGSLPSGG-AVAVKRFEKPNRVECARNPFTTEFATMAGCLRH-----KN 344
++G G +VY G S VA+K EK + P T L+
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L W + VL+ E P D L + + L E + V A+ + H
Sbjct: 98 VIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH 154
Query: 405 EECERQIIHRDVKACNILLDAEF-NAKLGDFEA---------TIPAGTMGYLAPEYV-YS 453
C ++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 155 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 211
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 212 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 244
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 291 IVGEGASATVYKGSLPSGG-AVAVKRFEKPNRVECARNPFTTEFATMAGCLRH-----KN 344
++G G +VY G S VA+K EK + P T L+
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L W + VL+ E P D L + + L E + V A+ + H
Sbjct: 71 VIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 405 EECERQIIHRDVKACNILLDAEF-NAKLGDFEA---------TIPAGTMGYLAPEYV-YS 453
C ++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 128 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 184
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 217
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 291 IVGEGASATVYKGSLPSGG-AVAVKRFEKPNRVECARNPFTTEFATMAGCLRH-----KN 344
++G G +VY G S VA+K EK + P T L+
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L W + VL+ E P D L + + L E + V A+ + H
Sbjct: 76 VIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 405 EECERQIIHRDVKACNILLDAEF-NAKLGDFEA---------TIPAGTMGYLAPEYV-YS 453
C ++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 133 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 189
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 222
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 26/158 (16%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+V+ + L +V EY G L + + N S ++ + S
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR----FSEDEARFFFQQLISG 127
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKL-----GDFEATI-------PAGTMGYLA 447
+SY H Q+ HRD+K N LLD +L G ++++ GT Y+A
Sbjct: 128 VSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIA 184
Query: 448 PEYV----YSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
PE + Y G + DV+S GV + G P ++
Sbjct: 185 PEVLLKKEYDG---KVADVWSCGVTLYVMLVGAYPFED 219
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 26/158 (16%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASA 399
LRH N+V+ + L +V EY G L + + N S ++ + S
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR----FSEDEARFFFQQLISG 127
Query: 400 LSYLHEECERQIIHRDVKACNILLDAEFNAKL-----GDFEATI-------PAGTMGYLA 447
+SY H Q+ HRD+K N LLD +L G ++++ GT Y+A
Sbjct: 128 VSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIA 184
Query: 448 PEYV----YSGVPSEKTDVYSFGVVALEVAAGKSPVDN 481
PE + Y G + DV+S GV + G P ++
Sbjct: 185 PEVLLKKEYDG---KVADVWSCGVTLYVMLVGAYPFED 219
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 291 IVGEGASATVYKGSLPSGG-AVAVKRFEKPNRVECARNPFTTEFATMAGCLRH-----KN 344
++G G +VY G S VA+K EK + P T L+
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L W + VL+ E P D L + + L E + V A+ + H
Sbjct: 90 VIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH 146
Query: 405 EECERQIIHRDVKACNILLDAEF-NAKLGDFEA---------TIPAGTMGYLAPEYV-YS 453
C ++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 147 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 203
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 236
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 291 IVGEGASATVYKGSLPSGG-AVAVKRFEKPNRVECARNPFTTEFATMAGCLRH-----KN 344
++G G +VY G S VA+K EK + P T L+
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L W + VL+ E P D L + + L E + V A+ + H
Sbjct: 90 VIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH 146
Query: 405 EECERQIIHRDVKACNILLDAEF-NAKLGDFEA---------TIPAGTMGYLAPEYV-YS 453
C ++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 147 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 203
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 236
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 291 IVGEGASATVYKGSLPSGG-AVAVKRFEKPNRVECARNPFTTEFATMAGCLRH-----KN 344
++G G +VY G S VA+K EK + P T L+
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L W + VL+ E P D L + + L E + V A+ + H
Sbjct: 91 VIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 405 EECERQIIHRDVKACNILLDAEFNA-KLGDFEA---------TIPAGTMGYLAPEYV-YS 453
C ++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 148 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 204
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 237
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 291 IVGEGASATVYKGSLPSGG-AVAVKRFEKPNRVECARNPFTTEFATMAGCLRH-----KN 344
++G G +VY G S VA+K EK + P T L+
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L W + VL+ E P D L + + L E + V A+ + H
Sbjct: 91 VIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 405 EECERQIIHRDVKACNILLDAEFNA-KLGDFEA---------TIPAGTMGYLAPEYV-YS 453
C ++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 148 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 204
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 237
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 291 IVGEGASATVYKGSLPSGG-AVAVKRFEKPNRVECARNPFTTEFATMAGCLRH-----KN 344
++G G +VY G S VA+K EK + P T L+
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L W + VL+ E P D L + + L E + V A+ + H
Sbjct: 91 VIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 405 EECERQIIHRDVKACNILLDAEFNA-KLGDFEA---------TIPAGTMGYLAPEYV-YS 453
C ++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 148 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 204
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 237
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 291 IVGEGASATVYKGSLPSGG-AVAVKRFEKPNRVECARNPFTTEFATMAGCLRH-----KN 344
++G G +VY G S VA+K EK + P T L+
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L W + VL+ E P D L + + L E + V A+ + H
Sbjct: 110 VIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH 166
Query: 405 EECERQIIHRDVKACNILLDAEFNA-KLGDFEA---------TIPAGTMGYLAPEYV-YS 453
C ++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 167 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 223
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 224 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 256
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 291 IVGEGASATVYKGSLPSGG-AVAVKRFEKPNRVECARNPFTTEFATMAGCLRH-----KN 344
++G G +VY G S VA+K EK + P T L+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L W + VL+ E P D L + + L E + V A+ + H
Sbjct: 103 VIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 405 EECERQIIHRDVKACNILLDAEF-NAKLGDFEA---------TIPAGTMGYLAPEYV-YS 453
C ++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 160 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 216
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 249
>pdb|3IPV|B Chain B, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
pdb|3IPV|D Chain D, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
Length = 239
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 72/184 (39%), Gaps = 16/184 (8%)
Query: 3 DPKTNTTASFSCRFSFSIIPSPLCAFGDGFAFLITSNADSFGNDNGYMGL-PGPVLSPQD 61
D T ASF+ F F+I + DG AF + A + + G++GL V
Sbjct: 61 DSATGLVASFATSFRFTIYAPNIATIADGLAFFLAPVASAPDSGGGFLGLFDSAVGDTTY 120
Query: 62 SFFAVEFDTSFDPSLXXXXXXXXXXXXXXXXXXXXXDALSRGIDLKSGRHITTWIEYRDS 121
AVEFDT ++ ++ S L +G I Y +
Sbjct: 121 QTVAVEFDT-YENTVFTDPPYTHIGFDVNSISSIKTVKWS----LANGEAAKVLITYNSA 175
Query: 122 LKLIRVWAGYSQIRPPS--PLIIAQI-DLSKQFKDYMHVGFSAANGQGSA---IYTVDRW 175
+KL+ S + P S I+A I DLS +++ VGFSAA G + V W
Sbjct: 176 VKLLVA----SLVYPSSKTSFILADIVDLSSVLPEWVRVGFSAATGASKGYIETHDVFSW 231
Query: 176 RFKT 179
F +
Sbjct: 232 SFAS 235
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 291 IVGEGASATVYKGSLPSGG-AVAVKRFEKPNRVECARNPFTTEFATMAGCLRH-----KN 344
++G G +VY G S VA+K EK + P T L+
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L W + VL+ E P D L + + L E + V A+ + H
Sbjct: 118 VIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH 174
Query: 405 EECERQIIHRDVKACNILLDAEF-NAKLGDFEA---------TIPAGTMGYLAPEYV-YS 453
C ++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 175 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 231
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 264
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 291 IVGEGASATVYKGSLPSGG-AVAVKRFEKPNRVECARNPFTTEFATMAGCLRH-----KN 344
++G G +VY G S VA+K EK + P T L+
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L W + VL+ E P D L + + L E + V A+ + H
Sbjct: 118 VIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH 174
Query: 405 EECERQIIHRDVKACNILLDAEF-NAKLGDFEA---------TIPAGTMGYLAPEYV-YS 453
C ++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 175 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 231
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 264
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 25/156 (16%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQG 350
+G+G V+K +G VA+K+ N E E + L+H+N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQ-LLKHENVVNLIE 84
Query: 351 WC---------CEGNELVLVYEYLPN---GSLDKILHNNSSSSIVLSWEKRLNIVLGVAS 398
C C+ + + LV+++ + G L +L + S I + LN
Sbjct: 85 ICRTKASPYNRCKAS-IYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN------- 136
Query: 399 ALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF 434
L Y+H +I+HRD+KA N+L+ + KL DF
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADF 169
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 291 IVGEGASATVYKGSLPSGG-AVAVKRFEKPNRVECARNPFTTEFATMAGCLRH-----KN 344
++G G +VY G S VA+K EK + P T L+
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L W + VL+ E P D L + + L E + V A+ + H
Sbjct: 104 VIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 405 EECERQIIHRDVKACNILLDAEF-NAKLGDFEA---------TIPAGTMGYLAPEYV-YS 453
C ++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 161 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 217
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 291 IVGEGASATVYKGSLPSGG-AVAVKRFEKPNRVECARNPFTTEFATMAGCLRH-----KN 344
++G G +VY G S VA+K EK + P T L+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L W + VL+ E P D L + + L E + V A+ + H
Sbjct: 103 VIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 405 EECERQIIHRDVKACNILLDAEF-NAKLGDFEA---------TIPAGTMGYLAPEYV-YS 453
C ++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 160 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 216
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 249
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 291 IVGEGASATVYKGSLPSGG-AVAVKRFEKPNRVECARNPFTTEFATMAGCLRH-----KN 344
++G G +VY G S VA+K EK + P T L+
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L W + VL+ E P D L + + L E + V A+ + H
Sbjct: 104 VIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 405 EECERQIIHRDVKACNILLDAEF-NAKLGDFEA---------TIPAGTMGYLAPEYV-YS 453
C ++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 161 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 217
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 291 IVGEGASATVYKGSLPSGG-AVAVKRFEKPNRVECARNPFTTEFATMAGCLRH-----KN 344
++G G +VY G S VA+K EK + P T L+
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L W + VL+ E P D L + + L E + V A+ + H
Sbjct: 104 VIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 405 EECERQIIHRDVKACNILLDAEF-NAKLGDFEA---------TIPAGTMGYLAPEYV-YS 453
C ++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 161 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 217
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 30/204 (14%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 109
Query: 349 QGWCC------EGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSY 402
E N++ LV +L L+ I+ + + + ++ + L Y
Sbjct: 110 LDVFTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKY 163
Query: 403 LHEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSG 454
+H IIHRD+K N+ ++ + K+ DF E T Y APE + +
Sbjct: 164 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWYRAPEIMLNW 220
Query: 455 VPSEKT-DVYSFGVVALEVAAGKS 477
+ +T D++S G + E+ G++
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 291 IVGEGASATVYKGSLPSGG-AVAVKRFEKPNRVECARNPFTTEFATMAGCLRH-----KN 344
++G G +VY G S VA+K EK + P T L+
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L W + VL+ E P D L + + L E + V A+ + H
Sbjct: 104 VIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 405 EECERQIIHRDVKACNILLDAEF-NAKLGDFEA---------TIPAGTMGYLAPEYV-YS 453
C ++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 161 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 217
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 291 IVGEGASATVYKGSLPSGG-AVAVKRFEKPNRVECARNPFTTEFATMAGCLRH-----KN 344
++G G +VY G S VA+K EK + P T L+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L W + VL+ E P D L + + L E + V A+ + H
Sbjct: 103 VIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 405 EECERQIIHRDVKACNILLDAEF-NAKLGDFEA---------TIPAGTMGYLAPEYV-YS 453
C ++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 160 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 216
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 249
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 291 IVGEGASATVYKGSLPSGG-AVAVKRFEKPNRVECARNPFTTEFATMAGCLRH-----KN 344
++G G +VY G S VA+K EK + P T L+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L W + VL+ E P D L + + L E + V A+ + H
Sbjct: 103 VIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 405 EECERQIIHRDVKACNILLDAEF-NAKLGDFEA---------TIPAGTMGYLAPEYV-YS 453
C ++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 160 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 216
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 249
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 291 IVGEGASATVYKGSLPSGG-AVAVKRFEKPNRVECARNPFTTEFATMAGCLRH-----KN 344
++G G +VY G S VA+K EK + P T L+
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 345 LVQLQGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLH 404
+++L W + VL+ E P D L + + L E + V A+ + H
Sbjct: 123 VIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH 179
Query: 405 EECERQIIHRDVKACNILLDAEF-NAKLGDFEA---------TIPAGTMGYLAPEYV-YS 453
C ++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 180 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 236
Query: 454 GVPSEKTDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 237 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 269
>pdb|3USU|B Chain B, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|D Chain D, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|F Chain F, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|H Chain H, Crystal Structure Of Butea Monosperma Seed Lectin
Length = 242
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 70/190 (36%), Gaps = 20/190 (10%)
Query: 3 DPKTNTTASFSCRFSFSIIPSPLCAFGDGFAFLITSNADSFGNDNGYMGL-PGPVLSPQD 61
D KT ASF+ F F+I + DG AF + + G++GL V +
Sbjct: 62 DSKTGVVASFATSFRFTIYAPNIATIADGLAFFLAPVSSPPKAGAGFLGLFDSAVFNSSY 121
Query: 62 SFFAVEFDTS-----FDPSLXXXXXXXXXXXXXXXXXXXXXDALSRGIDLKSGRHITTWI 116
AVEFDT DP + DL +G I
Sbjct: 122 QTVAVEFDTYENTVFLDPP----------DTHIGIDVNSIKSIKTVKWDLANGEAAKVLI 171
Query: 117 EYRDSLKLIRVWAGYSQIRPPSPLIIAQIDLSKQFKDYMHVGFSAANGQGSA---IYTVD 173
Y S KL+ Y + S ++ +DL +++ +GFSAA G S + V
Sbjct: 172 TYDSSAKLLVAALVYPSSK-TSFILSDVVDLKSVLPEWVSIGFSAATGASSGYIETHDVF 230
Query: 174 RWRFKTFESY 183
W F + S+
Sbjct: 231 SWSFASKLSF 240
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 290 RIVGEGASATV-YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+I+G G+S TV ++GS G VAVKR + + A E + H N+++
Sbjct: 21 KILGYGSSGTVVFQGSF-QGRPVAVKRM-LIDFCDIA----LMEIKLLTESDDHPNVIRY 74
Query: 349 QGWCCEGNELVL-VYEYLPNGSLDKILHNNSSSSIVLSWEKRLN---IVLGVASALSYLH 404
+C E + L + L N +L ++ + + S L +K N ++ +AS +++LH
Sbjct: 75 --YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 132
Query: 405 EECERQIIHRDVKACNILL--DAEFNAK-----------LGDF---------------EA 436
+IIHRD+K NIL+ + F A + DF
Sbjct: 133 S---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 189
Query: 437 TIPAGTMGYLAPEYVYSGVP-------SEKTDVYSFGVVALEV-AAGKSP 478
P+GT G+ APE + + D++S G V + + GK P
Sbjct: 190 NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 290 RIVGEGASATV-YKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQL 348
+I+G G+S TV ++GS G VAVKR + + A E + H N+++
Sbjct: 21 KILGYGSSGTVVFQGSF-QGRPVAVKRM-LIDFCDIA----LMEIKLLTESDDHPNVIRY 74
Query: 349 QGWCCEGNELVL-VYEYLPNGSLDKILHNNSSSSIVLSWEKRLN---IVLGVASALSYLH 404
+C E + L + L N +L ++ + + S L +K N ++ +AS +++LH
Sbjct: 75 --YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 132
Query: 405 EECERQIIHRDVKACNILL--DAEFNAK-----------LGDF---------------EA 436
+IIHRD+K NIL+ + F A + DF
Sbjct: 133 S---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNL 189
Query: 437 TIPAGTMGYLAPEYVYSGVP-------SEKTDVYSFGVVALEV-AAGKSP 478
P+GT G+ APE + + D++S G V + + GK P
Sbjct: 190 NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 27/187 (14%)
Query: 307 SGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGWCCEGNEL------VL 360
+G VA+K+ +P + E E + +RH+N++ L L L
Sbjct: 49 TGAKVAIKKLYRPFQSELFAKRAYRELRLLKH-MRHENVIGLLDVFTPDETLDDFTDFYL 107
Query: 361 VYEYLPNGSLDKILHNNSSSSIVLSWEKRLN-IVLGVASALSYLHEECERQIIHRDVKAC 419
V ++ L K++ + E R+ +V + L Y+H IIHRD+K
Sbjct: 108 VMPFM-GTDLGKLMKHEKLG------EDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPG 157
Query: 420 NILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGVPSEKT-DVYSFGVVAL 470
N+ ++ + K+ DF E T Y APE + + + +T D++S G +
Sbjct: 158 NLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMA 217
Query: 471 EVAAGKS 477
E+ GK+
Sbjct: 218 EMITGKT 224
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 30/204 (14%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 86
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 141
Query: 404 HEECERQIIHRDVKACNI---------LLDAEFNAKLGDFEATIPAGTMGYLAPEYVYSG 454
H IIHRD+K N+ +LDA A+ D E T T Y APE + +
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDAGL-ARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 455 VPSEKT-DVYSFGVVALEVAAGKS 477
+ +T D++S G + E+ G++
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3USU|A Chain A, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|C Chain C, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|E Chain E, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|G Chain G, Crystal Structure Of Butea Monosperma Seed Lectin
Length = 256
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 70/190 (36%), Gaps = 20/190 (10%)
Query: 3 DPKTNTTASFSCRFSFSIIPSPLCAFGDGFAFLITSNADSFGNDNGYMGL-PGPVLSPQD 61
D KT ASF+ F F+I + DG AF + + G++GL V +
Sbjct: 62 DSKTGVVASFATSFRFTIYAPNIATIADGLAFFLAPVSSPPKAGAGFLGLFDSAVFNSSY 121
Query: 62 SFFAVEFDTS-----FDPSLXXXXXXXXXXXXXXXXXXXXXDALSRGIDLKSGRHITTWI 116
AVEFDT DP + DL +G I
Sbjct: 122 QTVAVEFDTYENTVFLDPP----------DTHIGIDVNSIKSIKTVKWDLANGEAAKVLI 171
Query: 117 EYRDSLKLIRVWAGYSQIRPPSPLIIAQIDLSKQFKDYMHVGFSAANGQGSA---IYTVD 173
Y S KL+ Y + S ++ +DL +++ +GFSAA G S + V
Sbjct: 172 TYDSSAKLLVAALVYPSSK-TSFILSDVVDLKSVLPEWVSIGFSAATGASSGYIETHDVF 230
Query: 174 RWRFKTFESY 183
W F + S+
Sbjct: 231 SWSFASKLSF 240
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 32/174 (18%)
Query: 326 RNPFTTEFATMAGC--LRHKNLVQLQGWCCEGNE--LVLVYEYLPNGSLDKILHNNSSSS 381
R P + +A L H N+V+L + NE L +V+E + G + ++ +
Sbjct: 77 RGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV-----PTL 131
Query: 382 IVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDF------- 434
LS ++ + + YLH + +IIHRD+K N+L+ + + K+ DF
Sbjct: 132 KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
Query: 435 --EATI--PAGTMGYLAPE------YVYSGVPSEKTDVYSFGVVALEVAAGKSP 478
+A + GT ++APE ++SG + DV++ GV G+ P
Sbjct: 189 GSDALLSNTVGTPAFMAPESLSETRKIFSG---KALDVWAMGVTLYCFVFGQCP 239
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 85/203 (41%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 86
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 141
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKL--------GDFEATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ D E T T Y APE + + +
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 85/203 (41%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 86
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 141
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKLGDF--------EATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ F E T T Y APE + + +
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 85/203 (41%), Gaps = 28/203 (13%)
Query: 292 VGEGASATVYKG-SLPSGGAVAVKRFEKPNR--VECARNPFTTEFATMAGCLRHKNLVQL 348
VG GA +V +G VAVK+ +P + + R T + ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---TYRELRLLKHMKHENVIGL 86
Query: 349 QGWCCEGNEL-----VLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYL 403
L V + +L L+ I+ + + + ++ + L Y+
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYI 141
Query: 404 HEECERQIIHRDVKACNILLDAEFNAKL--------GDFEATIPAGTMGYLAPEYVYSGV 455
H IIHRD+K N+ ++ + K+ D E T T Y APE + + +
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 456 PSEKT-DVYSFGVVALEVAAGKS 477
+T D++S G + E+ G++
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2SBA|A Chain A, Soybean Agglutinin Complexed With 2,6-Pentasaccharide
pdb|1G9F|A Chain A, Crystal Structure Of The Soybean Agglutinin In A Complex
With A Biantennary Blood Group Antigen Analog
pdb|1SBD|A Chain A, Soybean Agglutinin Complexed With 2,4-pentasaccharide
pdb|1SBE|A Chain A, Soybean Agglutinin From Glycine Max
pdb|1SBF|A Chain A, Soybean Agglutinin
Length = 253
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 74/196 (37%), Gaps = 18/196 (9%)
Query: 3 DPKTNTTASFSCRFSFSIIPSPLCAFGDGFAFLITSNADSFGNDNGYMGLPGPVLSPQDS 62
D +T + ASF+ F+F+ DG AF + GY+GL S D
Sbjct: 61 DKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQTHAGYLGLFNENES-GDQ 119
Query: 63 FFAVEFDT---SFDPSLXXXXXXXXXXXXXXXXXXXXXDALSRGIDLKSGRHITTWIEYR 119
AVEFDT S+DP + DL + + I Y
Sbjct: 120 VVAVEFDTFRNSWDPP----------NPHIGINVNSIRSIKTTSWDLANNKVAKVLITYD 169
Query: 120 DSLKLIRVWAGYSQIRPPSPLIIAQIDLSKQFKDYMHVGFSAANGQG--SAIYTVDRWRF 177
S L+ Y R S ++ +DL +++ +GFSAA G + V W F
Sbjct: 170 ASTSLLVASLVYPSQR-TSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSF 228
Query: 178 KTFESYPSGNPIDVID 193
+ + S N ID +D
Sbjct: 229 ASNLPHASSN-IDPLD 243
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 82/198 (41%), Gaps = 16/198 (8%)
Query: 292 VGEGASATVYKGSLPSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKNLVQLQGW 351
+ E S ++KG G + VK + + F E + H N++ + G
Sbjct: 18 LNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLR-IFSHPNVLPVLGA 75
Query: 352 CCE--GNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECER 409
C L+ ++P GSL +LH ++ V+ + + L +A +++LH E
Sbjct: 76 CQSPPAPHPTLITHWMPYGSLYNVLH--EGTNFVVDQSQAVKFALDMARGMAFLH-TLEP 132
Query: 410 QIIHRDVKACNILLDAEFNAKLGDFEATIPAGTMGYL-APEYVYSGVPSEK--------T 460
I + + ++++D + A++ + + G + AP +V +K
Sbjct: 133 LIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSA 192
Query: 461 DVYSFGVVALEVAAGKSP 478
D++SF V+ E+ + P
Sbjct: 193 DMWSFAVLLWELVTREVP 210
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 20/101 (19%)
Query: 396 VASALSYLHEECERQIIHRDVKACNILLDAEFN-AKLGDFEA---------TIPAGTMGY 445
V +A+ + H R ++HRD+K NIL+D AKL DF + T GT Y
Sbjct: 148 VVAAIQHCHS---RGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVY 204
Query: 446 LAPEYV----YSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
PE++ Y +P+ V+S G++ ++ G P + D
Sbjct: 205 SPPEWISRHQYHALPAT---VWSLGILLYDMVCGDIPFERD 242
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
Query: 358 LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVK 417
L++V E L G L + + + + + I+ + A+ YLH I HRDVK
Sbjct: 96 LLIVMECLDGGELFSRIQDRGDQA--FTEREASEIMKSIGEAIQYLHS---INIAHRDVK 150
Query: 418 ACNILLDAEF-NA--KLGDF----------EATIPAGTMGYLAPEYVYSGVPSEKTDVYS 464
N+L ++ NA KL DF T P T Y+APE + + D++S
Sbjct: 151 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 210
Query: 465 FGVVALEVAAGKSPV-DNDGCVI 486
GV+ + G P N G I
Sbjct: 211 LGVIMYILLCGYPPFYSNHGLAI 233
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 70/169 (41%), Gaps = 41/169 (24%)
Query: 340 LRHKNLVQLQG--WCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLG-- 395
LRHKN++QL + E ++ +V EY G + ++L + EKR +
Sbjct: 63 LRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVP--------EKRFPVCQAHG 113
Query: 396 ----VASALSYLHEECERQIIHRDVKACNILLDAEFNAK---LGDFEATIP--------- 439
+ L YLH + I+H+D+K N+LL K LG EA P
Sbjct: 114 YFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRT 170
Query: 440 -AGTMGYLAPEY-----VYSGVPSEKTDVYSFGVVALEVAAGKSPVDND 482
G+ + PE +SG K D++S GV + G P + D
Sbjct: 171 SQGSPAFQPPEIANGLDTFSGF---KVDIWSAGVTLYNITTGLYPFEGD 216
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
Query: 358 LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVK 417
L++V E L G L + + + + + I+ + A+ YLH I HRDVK
Sbjct: 104 LLIVMECLDGGELFSRIQDRGDQA--FTEREASEIMKSIGEAIQYLHS---INIAHRDVK 158
Query: 418 ACNILLDAEF-NA--KLGDF----------EATIPAGTMGYLAPEYVYSGVPSEKTDVYS 464
N+L ++ NA KL DF T P T Y+APE + + D++S
Sbjct: 159 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 218
Query: 465 FGVVALEVAAGKSPV-DNDGCVI 486
GV+ + G P N G I
Sbjct: 219 LGVIMYILLCGYPPFYSNHGLAI 241
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 89/214 (41%), Gaps = 37/214 (17%)
Query: 286 FNKNRIVGEGASATVYKGSL-PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F ++GEGA V + P+G VA+K+ E ++ A T + +H+N
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALR--TLREIKILKHFKHEN 70
Query: 345 LVQL----QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASAL 400
++ + + E V + + L L +++ S+ +LS + + A+
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-----STQMLSDDHIQYFIYQTLRAV 125
Query: 401 SYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAG-------- 441
LH +IHRD+K N+L+++ + K+ DF + + P G
Sbjct: 126 KVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEX 182
Query: 442 --TMGYLAPEYVYSGVP-SEKTDVYSFGVVALEV 472
T Y APE + + S DV+S G + E+
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
Query: 358 LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVK 417
L++V E L G L + + + + + I+ + A+ YLH I HRDVK
Sbjct: 95 LLIVMECLDGGELFSRIQDRGDQA--FTEREASEIMKSIGEAIQYLHS---INIAHRDVK 149
Query: 418 ACNILLDAEF-NA--KLGDF----------EATIPAGTMGYLAPEYVYSGVPSEKTDVYS 464
N+L ++ NA KL DF T P T Y+APE + + D++S
Sbjct: 150 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 209
Query: 465 FGVVALEVAAGKSPV-DNDGCVI 486
GV+ + G P N G I
Sbjct: 210 LGVIMYILLCGYPPFYSNHGLAI 232
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
Query: 358 LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVK 417
L++V E L G L + + + + + I+ + A+ YLH I HRDVK
Sbjct: 94 LLIVMECLDGGELFSRIQDRGDQA--FTEREASEIMKSIGEAIQYLHS---INIAHRDVK 148
Query: 418 ACNILLDAEF-NA--KLGDF----------EATIPAGTMGYLAPEYVYSGVPSEKTDVYS 464
N+L ++ NA KL DF T P T Y+APE + + D++S
Sbjct: 149 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 208
Query: 465 FGVVALEVAAGKSPV-DNDGCVI 486
GV+ + G P N G I
Sbjct: 209 LGVIMYILLCGYPPFYSNHGLAI 231
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 89/214 (41%), Gaps = 37/214 (17%)
Query: 286 FNKNRIVGEGASATVYKGSL-PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F ++GEGA V + P+G VA+K+ E ++ A T + +H+N
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALR--TLREIKILKHFKHEN 70
Query: 345 LVQL----QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASAL 400
++ + + E V + + L L +++ S+ +LS + + A+
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-----STQMLSDDHIQYFIYQTLRAV 125
Query: 401 SYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAG-------- 441
LH +IHRD+K N+L+++ + K+ DF + + P G
Sbjct: 126 KVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEF 182
Query: 442 --TMGYLAPEYVYSGVP-SEKTDVYSFGVVALEV 472
T Y APE + + S DV+S G + E+
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 89/214 (41%), Gaps = 37/214 (17%)
Query: 286 FNKNRIVGEGASATVYKGSL-PSGGAVAVKRFEKPNRVECARNPFTTEFATMAGCLRHKN 344
F ++GEGA V + P+G VA+K+ E ++ A T + +H+N
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALR--TLREIKILKHFKHEN 70
Query: 345 LVQL----QGWCCEGNELVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASAL 400
++ + + E V + + L L +++ S+ +LS + + A+
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-----STQMLSDDHIQYFIYQTLRAV 125
Query: 401 SYLHEECERQIIHRDVKACNILLDAEFNAKLGDF-----------EATIPAG-------- 441
LH +IHRD+K N+L+++ + K+ DF + + P G
Sbjct: 126 KVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEY 182
Query: 442 --TMGYLAPEYVYSGVP-SEKTDVYSFGVVALEV 472
T Y APE + + S DV+S G + E+
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
Query: 358 LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVK 417
L++V E L G L + + + + + I+ + A+ YLH I HRDVK
Sbjct: 89 LLIVMECLDGGELFSRIQDRGDQA--FTEREASEIMKSIGEAIQYLHS---INIAHRDVK 143
Query: 418 ACNILLDAEF-NA--KLGDF----------EATIPAGTMGYLAPEYVYSGVPSEKTDVYS 464
N+L ++ NA KL DF T P T Y+APE + + D++S
Sbjct: 144 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 203
Query: 465 FGVVALEVAAGKSPV-DNDGCVI 486
GV+ + G P N G I
Sbjct: 204 LGVIMYILLCGYPPFYSNHGLAI 226
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
Query: 358 LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVK 417
L++V E L G L + + + + + I+ + A+ YLH I HRDVK
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQA--FTEREASEIMKSIGEAIQYLHS---INIAHRDVK 144
Query: 418 ACNILLDAEF-NA--KLGDF----------EATIPAGTMGYLAPEYVYSGVPSEKTDVYS 464
N+L ++ NA KL DF T P T Y+APE + + D++S
Sbjct: 145 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 204
Query: 465 FGVVALEVAAGKSPV-DNDGCVI 486
GV+ + G P N G I
Sbjct: 205 LGVIMYILLCGYPPFYSNHGLAI 227
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
Query: 358 LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVK 417
L++V E L G L + + + + + I+ + A+ YLH I HRDVK
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQA--FTEREASEIMKSIGEAIQYLHS---INIAHRDVK 142
Query: 418 ACNILLDAEF-NA--KLGDF----------EATIPAGTMGYLAPEYVYSGVPSEKTDVYS 464
N+L ++ NA KL DF T P T Y+APE + + D++S
Sbjct: 143 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 202
Query: 465 FGVVALEVAAGKSPV-DNDGCVI 486
GV+ + G P N G I
Sbjct: 203 LGVIMYILLCGYPPFYSNHGLAI 225
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
Query: 358 LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVK 417
L++V E L G L + + + + + I+ + A+ YLH I HRDVK
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQA--FTEREASEIMKSIGEAIQYLHS---INIAHRDVK 144
Query: 418 ACNILLDAEF-NA--KLGDF----------EATIPAGTMGYLAPEYVYSGVPSEKTDVYS 464
N+L ++ NA KL DF T P T Y+APE + + D++S
Sbjct: 145 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 204
Query: 465 FGVVALEVAAGKSPV-DNDGCVI 486
GV+ + G P N G I
Sbjct: 205 LGVIMYILLCGYPPFYSNHGLAI 227
>pdb|1GZ9|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli
Lectin In Complex With 2'-Alpha-L-Fucosyllactose
pdb|1GZC|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli
Lectin In Complex With Lactose
Length = 239
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 76/197 (38%), Gaps = 44/197 (22%)
Query: 3 DPKTNTTASFSCRFSFSI---IPSPLCAFGDGFAFLITSNADSFGNDNGYMGLPGPVLSP 59
D T T ASF RFSFSI PL A DG F + GY+G+ S
Sbjct: 61 DSTTGTVASFETRFSFSIEQPYTRPLPA--DGLVFFMGPTKSKPAQGYGYLGVFNN--SK 116
Query: 60 QDSFF---AVEFDTSFDPSLXXXXXXXXXXXXXXXXXXXXXDALSRGIDLKSGRHITTWI 116
QD+ + AVEFDT +P GID+ S R I T
Sbjct: 117 QDNSYQTLAVEFDTFSNP-------------------WDPPQVPHIGIDVNSIRSIKTQP 157
Query: 117 EYRDSLKLIRVWAGYSQ---------IRPPSPLI--IAQI-DLSKQFKDYMHVGFSAANG 164
D+ ++ V Y + P S I IA+I D+ + D++ VG S A G
Sbjct: 158 FQLDNGQVANVVIKYDAPSKILHVVLVYPSSGAIYTIAEIVDVKQVLPDWVDVGLSGATG 217
Query: 165 ---QGSAIYTVDRWRFK 178
+ + V W F+
Sbjct: 218 AQRDAAETHDVYSWSFQ 234
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
Query: 358 LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVK 417
L++V E L G L + + + + + I+ + A+ YLH I HRDVK
Sbjct: 134 LLIVMECLDGGELFSRIQDRGDQA--FTEREASEIMKSIGEAIQYLHS---INIAHRDVK 188
Query: 418 ACNILLDAEF-NA--KLGDF----------EATIPAGTMGYLAPEYVYSGVPSEKTDVYS 464
N+L ++ NA KL DF T P T Y+APE + + D++S
Sbjct: 189 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 248
Query: 465 FGVVALEVAAGKSPV-DNDGCVI 486
GV+ + G P N G I
Sbjct: 249 LGVIMYILLCGYPPFYSNHGLAI 271
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
Query: 358 LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVK 417
L++V E L G L + + + + + I+ + A+ YLH I HRDVK
Sbjct: 140 LLIVMECLDGGELFSRIQDRGDQA--FTEREASEIMKSIGEAIQYLHS---INIAHRDVK 194
Query: 418 ACNILLDAEF-NA--KLGDF----------EATIPAGTMGYLAPEYVYSGVPSEKTDVYS 464
N+L ++ NA KL DF T P T Y+APE + + D++S
Sbjct: 195 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 254
Query: 465 FGVVALEVAAGKSPV-DNDGCVI 486
GV+ + G P N G I
Sbjct: 255 LGVIMYILLCGYPPFYSNHGLAI 277
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
Query: 358 LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVK 417
L++V E L G L + + + + + I+ + A+ YLH I HRDVK
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQA--FTEREASEIMKSIGEAIQYLHS---INIAHRDVK 142
Query: 418 ACNILLDAEF-NA--KLGDF----------EATIPAGTMGYLAPEYVYSGVPSEKTDVYS 464
N+L ++ NA KL DF T P T Y+APE + + D++S
Sbjct: 143 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWS 202
Query: 465 FGVVALEVAAGKSPV-DNDGCVI 486
GV+ + G P N G I
Sbjct: 203 LGVIMYILLCGYPPFYSNHGLAI 225
>pdb|1UZY|A Chain A, Erythrina Crystagalli Lectin
pdb|1UZY|B Chain B, Erythrina Crystagalli Lectin
pdb|1UZZ|A Chain A, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1UZZ|B Chain B, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1UZZ|C Chain C, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1UZZ|D Chain D, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1V00|A Chain A, Erythrina Cristagalli Lectin
pdb|1V00|B Chain B, Erythrina Cristagalli Lectin
pdb|1V00|C Chain C, Erythrina Cristagalli Lectin
pdb|1V00|D Chain D, Erythrina Cristagalli Lectin
Length = 242
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 79/204 (38%), Gaps = 42/204 (20%)
Query: 3 DPKTNTTASFSCRFSFSI---IPSPLCAFGDGFAFLITSNADSFGNDNGYMGLPGPVLSP 59
D T T ASF RFSFSI PL A DG F + GY+G+ S
Sbjct: 61 DMTTGTVASFETRFSFSIEQPYTRPLPA--DGLVFFMGPTKSKPAQGYGYLGVFNN--SK 116
Query: 60 QDSFF---AVEFDTSFDPSLXXXXXXXXXXXXXXXXXXXXXDALSRGIDLKSGRHITTWI 116
QD+ + AVEFDT +P GID+ S R I T
Sbjct: 117 QDNSYQTLAVEFDTFSNP-------------------WDPPQVPHIGIDVNSIRSIKTQP 157
Query: 117 EYRDSLKLIRVWAGYSQ---------IRPPSPLI--IAQI-DLSKQFKDYMHVGFSAANG 164
D+ ++ V Y + P S I IA+I D+ + +++ VG S A G
Sbjct: 158 FQLDNGQVANVVIKYDASSKILLAVLVYPSSGAIYTIAEIVDVKQVLPEWVDVGLSGATG 217
Query: 165 -QGSAIYTVDRWRFKTFESYPSGN 187
Q A T D + + S P N
Sbjct: 218 AQRDAAETHDVYSWSFHASLPETN 241
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 413 HRDVKACNILLDAEFNAKLGDF---EATI---------PAGTMGYLAPEYVYSGVPSEKT 460
HRDVK NIL+ A+ A L DF AT GT+ Y APE + +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 461 DVYSFGVVALEVAAGKSPVDND 482
D+Y+ V E G P D
Sbjct: 217 DIYALTCVLYECLTGSPPYQGD 238
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 30/158 (18%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNN--SSSSIVLSWEKRLNIVLGV 396
L H +++++ + + + +V E + G L DK++ N ++ L + + L
Sbjct: 197 LNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML------ 249
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFN---AKLGDF-------EATIP---AGTM 443
A+ YLHE IIHRD+K N+LL ++ K+ DF E ++ GT
Sbjct: 250 -LAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 305
Query: 444 GYLAPEYVYS---GVPSEKTDVYSFGVVALEVAAGKSP 478
YLAPE + S + D +S GV+ +G P
Sbjct: 306 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
>pdb|1Q8O|A Chain A, Pterocartpus Angolensis Lectin Pal In Complex With The
Dimmanoside Man(Alpha1-2)man
pdb|1Q8O|B Chain B, Pterocartpus Angolensis Lectin Pal In Complex With The
Dimmanoside Man(Alpha1-2)man
pdb|1Q8P|A Chain A, Pterocarpus Angolensis Lectin Pal In Complex With The
Dimannoside Man(Alpha1-3)man
pdb|1Q8P|B Chain B, Pterocarpus Angolensis Lectin Pal In Complex With The
Dimannoside Man(Alpha1-3)man
pdb|1Q8Q|A Chain A, Pterocarpus Angolensis Lectin (pal) In Complex With The
Dimannoside Man(alpha1-4)man
pdb|1Q8Q|B Chain B, Pterocarpus Angolensis Lectin (pal) In Complex With The
Dimannoside Man(alpha1-4)man
pdb|1Q8S|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Dimannoside Man(Alpha1-6)man
pdb|1Q8S|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Dimannoside Man(Alpha1-6)man
pdb|1Q8V|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Trimannoside [man(Alpha1-3)]man(Alpha1-6)man
pdb|1Q8V|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Trimannoside [man(Alpha1-3)]man(Alpha1-6)man
pdb|1UKG|A Chain A, Pterocarps Angolensis Lectin Pal In Complex With Methyl-
Alpha-Mannose
pdb|1UKG|B Chain B, Pterocarps Angolensis Lectin Pal In Complex With Methyl-
Alpha-Mannose
pdb|2GME|A Chain A, Metal-Free (Apo) P. Angolensis Seed Lectin
pdb|2GME|B Chain B, Metal-Free (Apo) P. Angolensis Seed Lectin
pdb|2GMM|A Chain A, Metal-Free (Apo) P. Angolensis Seed Lectin In Complex With
Man-Alpha(1-2)man
pdb|2GMM|B Chain B, Metal-Free (Apo) P. Angolensis Seed Lectin In Complex With
Man-Alpha(1-2)man
pdb|2GMP|A Chain A, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Glcnac- Beta(1-2)man
pdb|2GMP|B Chain B, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Glcnac- Beta(1-2)man
pdb|2GN3|A Chain A, Metal-Free (Apo-Pal) In Complex With Alpha-D-Met-Man
pdb|2GN3|B Chain B, Metal-Free (Apo-Pal) In Complex With Alpha-D-Met-Man
pdb|2GN7|A Chain A, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Man-alpha(1-3)man-alpha(1-6)man
pdb|2GN7|B Chain B, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Man-alpha(1-3)man-alpha(1-6)man
pdb|2GNB|A Chain A, Edta-Treated (2 Weeks) P. Angolensis Lectin
pdb|2GNB|B Chain B, Edta-Treated (2 Weeks) P. Angolensis Lectin
pdb|2GND|A Chain A, One Hour Edta Treatment, P. Angolensis Lectin
pdb|2GND|B Chain B, One Hour Edta Treatment, P. Angolensis Lectin
pdb|2GNM|A Chain A, P. Angolensis Lectin (Pal) Treated With Edta For 39 Hours
pdb|2GNM|B Chain B, P. Angolensis Lectin (Pal) Treated With Edta For 39 Hours
pdb|2GNT|A Chain A, Edta Treated P. Angolensis Lectin (Pal) Remetallized With
Calcium (1 Hour Treatment)
pdb|2GNT|B Chain B, Edta Treated P. Angolensis Lectin (Pal) Remetallized With
Calcium (1 Hour Treatment)
pdb|2AUY|A Chain A, Pterocarpus Angolensis Lectin In Complex With The
Trisaccharide Glcnac(b1-2)man(a1-3)man
pdb|2AUY|B Chain B, Pterocarpus Angolensis Lectin In Complex With The
Trisaccharide Glcnac(b1-2)man(a1-3)man
pdb|2PHF|A Chain A, Pterocarpus Angolensis Lectin Complexed With Man-6
pdb|2PHF|B Chain B, Pterocarpus Angolensis Lectin Complexed With Man-6
pdb|2PHR|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With
Man-7d1
pdb|2PHR|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With
Man-7d1
pdb|2PHT|A Chain A, Pterocarpus Angolensis Lectin (P L) In Complex With
Man-7d3
pdb|2PHT|B Chain B, Pterocarpus Angolensis Lectin (P L) In Complex With
Man-7d3
pdb|2PHU|A Chain A, Pterocarpus Angolensis Lectin In Complex With Man-8d1d3
pdb|2PHU|B Chain B, Pterocarpus Angolensis Lectin In Complex With Man-8d1d3
pdb|2PHW|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-9
pdb|2PHW|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-9
pdb|2PHX|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-5
pdb|2PHX|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-5
Length = 252
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 25/182 (13%)
Query: 10 ASFSCRFSFSIIPSPLCAFGDGFAFLI----TSNADSFGNDNGYMGLPGPVL-SPQDSFF 64
A+F +FSFS+ SPL DG AF I T+ G + PG + +
Sbjct: 67 ANFQSQFSFSL-KSPLSNGADGIAFFIAPPDTTIPSGSGGGLLGLFAPGTAQNTSANQVI 125
Query: 65 AVEFDT-------SFDPSLXXXXXXXXXXXXXXXXXXXXXDALSRGIDLKSGRHITTWIE 117
AVEFDT ++DP+ D + G+ + +
Sbjct: 126 AVEFDTFYAQDSNTWDPNYPHIGIDVNSIRSVKTVKW----------DRRDGQSLNVLVT 175
Query: 118 YRDSLKLIRVWAGYSQIRPPSPLIIAQIDLSKQFKDYMHVGFSAANGQGSAIYTVDRWRF 177
+ S + + V A YS + ++D+ +++ VGFSAA+G+ +T++ W F
Sbjct: 176 FNPSTRNLDVVATYSDGTRYE--VSYEVDVRSVLPEWVRVGFSAASGEQYQTHTLESWSF 233
Query: 178 KT 179
+
Sbjct: 234 TS 235
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 30/158 (18%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNN--SSSSIVLSWEKRLNIVLGV 396
L H +++++ + + + +V E + G L DK++ N ++ L + + L
Sbjct: 211 LNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML------ 263
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFN---AKLGDF-------EATIP---AGTM 443
A+ YLHE IIHRD+K N+LL ++ K+ DF E ++ GT
Sbjct: 264 -LAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 319
Query: 444 GYLAPEYVYS---GVPSEKTDVYSFGVVALEVAAGKSP 478
YLAPE + S + D +S GV+ +G P
Sbjct: 320 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 357
>pdb|1N3O|A Chain A, Pterocarcpus Angolensis Lectin In Complex With
Alpha-Methyl Glucose
pdb|1N3O|B Chain B, Pterocarcpus Angolensis Lectin In Complex With
Alpha-Methyl Glucose
pdb|1N3P|A Chain A, Pterocarpus Angolensis Lectin In Complex With Sucrose
pdb|1N3P|B Chain B, Pterocarpus Angolensis Lectin In Complex With Sucrose
pdb|1N3Q|A Chain A, Pterocarpus Angolensis Lectin Complexed With Turanose
pdb|1N3Q|B Chain B, Pterocarpus Angolensis Lectin Complexed With Turanose
pdb|1S1A|A Chain A, Pterocarpus Angolensis Seed Lectin (Pal) With One Binding
Site Free And One Binding Site Containing The
Disaccharide Man(A1-3)manme
pdb|1S1A|B Chain B, Pterocarpus Angolensis Seed Lectin (Pal) With One Binding
Site Free And One Binding Site Containing The
Disaccharide Man(A1-3)manme
pdb|2AR6|A Chain A, Pterocarpus Angolensis Lectin (pal) In Complex With The
Pentasaccharide M592
pdb|2AR6|B Chain B, Pterocarpus Angolensis Lectin (pal) In Complex With The
Pentasaccharide M592
pdb|2ARB|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Glcnac(Beta1- 2)man Disaccharide
pdb|2ARB|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Glcnac(Beta1- 2)man Disaccharide
pdb|2ARE|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With
D-Mannose (Anomeric Mixture)
pdb|2ARE|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With
D-Mannose (Anomeric Mixture)
pdb|2ARX|A Chain A, Pterocarpus Angolensis Seed Lectin In Complex With The
Decasaccharide Na2f
pdb|2ARX|B Chain B, Pterocarpus Angolensis Seed Lectin In Complex With The
Decasaccharide Na2f
Length = 252
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 25/182 (13%)
Query: 10 ASFSCRFSFSIIPSPLCAFGDGFAFLI----TSNADSFGNDNGYMGLPGPVL-SPQDSFF 64
A+F +FSFS+ SPL DG AF I T+ G + PG + +
Sbjct: 67 ANFQSQFSFSL-KSPLSNGADGIAFFIAPPDTTIPSGSGGGLLGLFAPGTAQNTSANQVI 125
Query: 65 AVEFDT-------SFDPSLXXXXXXXXXXXXXXXXXXXXXDALSRGIDLKSGRHITTWIE 117
AVEFDT ++DP+ D + G+ + +
Sbjct: 126 AVEFDTFYAQDSNTWDPNYPHIGIDVNSIRSVKTVKW----------DRRDGQSLNVLVT 175
Query: 118 YRDSLKLIRVWAGYSQIRPPSPLIIAQIDLSKQFKDYMHVGFSAANGQGSAIYTVDRWRF 177
+ S + + V A YS + ++D+ +++ VGFSAA+G+ +T++ W F
Sbjct: 176 FNPSTRNLDVVATYSDGTRYE--VSYEVDVRSVLPEWVRVGFSAASGEQYQTHTLESWSF 233
Query: 178 KT 179
+
Sbjct: 234 TS 235
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 59/143 (41%), Gaps = 19/143 (13%)
Query: 358 LVLVYEYLPNGSLDKILHNNSSSSIVLSWEKRLNIVLGVASALSYLHEECERQIIHRDVK 417
L++V E L G L + + + + + I + A+ YLH I HRDVK
Sbjct: 134 LLIVXECLDGGELFSRIQDRGDQA--FTEREASEIXKSIGEAIQYLHS---INIAHRDVK 188
Query: 418 ACNILLDAEF-NA--KLGDF----------EATIPAGTMGYLAPEYVYSGVPSEKTDVYS 464
N+L ++ NA KL DF T P T Y+APE + + D +S
Sbjct: 189 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWS 248
Query: 465 FGVVALEVAAGKSPV-DNDGCVI 486
GV+ + G P N G I
Sbjct: 249 LGVIXYILLCGYPPFYSNHGLAI 271
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 30/158 (18%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNN--SSSSIVLSWEKRLNIVLGV 396
L H +++++ + + + +V E + G L DK++ N ++ L + + L
Sbjct: 72 LNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML------ 124
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFN---AKLGDF-------EATIP---AGTM 443
A+ YLHE IIHRD+K N+LL ++ K+ DF E ++ GT
Sbjct: 125 -LAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 180
Query: 444 GYLAPEYVYS-GVP--SEKTDVYSFGVVALEVAAGKSP 478
YLAPE + S G + D +S GV+ +G P
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 30/158 (18%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNN--SSSSIVLSWEKRLNIVLGV 396
L H +++++ + + + +V E + G L DK++ N ++ L + + L
Sbjct: 72 LNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML------ 124
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFN---AKLGDF-------EATIP---AGTM 443
A+ YLHE IIHRD+K N+LL ++ K+ DF E ++ GT
Sbjct: 125 -LAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 180
Query: 444 GYLAPEYVYS-GVP--SEKTDVYSFGVVALEVAAGKSP 478
YLAPE + S G + D +S GV+ +G P
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 30/158 (18%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNN--SSSSIVLSWEKRLNIVLGV 396
L H +++++ + + + +V E + G L DK++ N ++ L + + L
Sbjct: 72 LNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML------ 124
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFN---AKLGDF-------EATIP---AGTM 443
A+ YLHE IIHRD+K N+LL ++ K+ DF E ++ GT
Sbjct: 125 -LAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 180
Query: 444 GYLAPEYVYS-GVP--SEKTDVYSFGVVALEVAAGKSP 478
YLAPE + S G + D +S GV+ +G P
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 30/158 (18%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNN--SSSSIVLSWEKRLNIVLGV 396
L H +++++ + + + +V E + G L DK++ N ++ L + + L
Sbjct: 78 LNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML------ 130
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFN---AKLGDF-------EATIP---AGTM 443
A+ YLHE IIHRD+K N+LL ++ K+ DF E ++ GT
Sbjct: 131 -LAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 186
Query: 444 GYLAPEYVYS-GVP--SEKTDVYSFGVVALEVAAGKSP 478
YLAPE + S G + D +S GV+ +G P
Sbjct: 187 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 30/158 (18%)
Query: 340 LRHKNLVQLQGWCCEGNELVLVYEYLPNGSL-DKILHNN--SSSSIVLSWEKRLNIVLGV 396
L H +++++ + + + +V E + G L DK++ N ++ L + + L
Sbjct: 71 LNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML------ 123
Query: 397 ASALSYLHEECERQIIHRDVKACNILLDAEFN---AKLGDF-------EATIP---AGTM 443
A+ YLHE IIHRD+K N+LL ++ K+ DF E ++ GT
Sbjct: 124 -LAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 179
Query: 444 GYLAPEYVYS-GVP--SEKTDVYSFGVVALEVAAGKSP 478
YLAPE + S G + D +S GV+ +G P
Sbjct: 180 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 16/95 (16%)
Query: 396 VASALSYLHEECERQIIHRDVKACNILLDAEFNAKLGDFEAT----------IPAGTMGY 445
+ SA+ YL + IIHRD+K NI++ +F KL DF + GT+ Y
Sbjct: 139 LVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEY 195
Query: 446 LAPEYVYSGVPSE--KTDVYSFGVVALEVAAGKSP 478
APE V G P + +++S GV + ++P
Sbjct: 196 CAPE-VLMGNPYRGPELEMWSLGVTLYTLVFEENP 229
>pdb|1LTE|A Chain A, Structure Of A Legume Lectin With An Ordered N-Linked
Carbohydrate In Complex With Lactose
Length = 239
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 74/188 (39%), Gaps = 26/188 (13%)
Query: 3 DPKTNTTASFSCRFSFSI---IPSPLCAFGDGFAFLITSNADSFGNDNGYMGLPGPVLSP 59
D T T ASF RFSFSI PL A DG F + GY+G+ S
Sbjct: 61 DMTTGTVASFETRFSFSIEQPYTRPLPA--DGLVFFMGPTKSKPAQGYGYLGIFN--QSK 116
Query: 60 QDSFF---AVEFDTSFDPSLXXXXXXXXXXXXXXXXXXXXXDALSRGIDLKSGRHITTWI 116
QD+ + VEFDT +P ++ L +G+ I
Sbjct: 117 QDNSYQTLGVEFDTFSNP------WDPPQVPHIGIDVNSIRSIKTQPFQLDNGQVANVVI 170
Query: 117 EYRDSLKLIRVWAGYSQIRPPSPLI--IAQI-DLSKQFKDYMHVGFSAANG---QGSAIY 170
+Y S KL+ Y P S I IA+I D+ + +++ VG S A G + +
Sbjct: 171 KYDASSKLLHAVLVY----PSSGAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETH 226
Query: 171 TVDRWRFK 178
V W F+
Sbjct: 227 DVYSWSFQ 234
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 411 IIHRDVKACNILLDAEF-NAKLGDFEA---------TIPAGTMGYLAPEYV-YSGVPSEK 459
++HRD+K NIL+D KL DF + T GT Y PE++ Y
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 237
Query: 460 TDVYSFGVVALEVAAGKSPVDNDGCVI 486
V+S G++ ++ G P ++D +I
Sbjct: 238 AAVWSLGILLYDMVCGDIPFEHDEEII 264
>pdb|3N35|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) With N-
Acetylgalactosamine
pdb|3N36|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) In Complex
With Galactose
pdb|3N3H|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) In Complex
With Citrate
Length = 242
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 79/207 (38%), Gaps = 48/207 (23%)
Query: 3 DPKTNTTASFSCRFSFSI---IPSPLCAFGDGFAFLITSNADSFGNDNGYMGLPGPVLSP 59
D T T ASF RFSFSI PL A DG F + GY+G+ S
Sbjct: 61 DMTTGTVASFETRFSFSIEQPYTRPLPA--DGLVFFMGPTKSKPAQGGGYLGIFNN--SK 116
Query: 60 QDSFF---AVEFDT---SFDPSLXXXXXXXXXXXXXXXXXXXXXDALSRGIDLKSGRHIT 113
QD+ + VEFDT +DP GID+ S R I
Sbjct: 117 QDNSYQTLGVEFDTFSNQWDPP----------------------QVPHIGIDVNSIRSIK 154
Query: 114 TWIEYRDSLKLIRVWAGYSQ---------IRPPSPLI--IAQI-DLSKQFKDYMHVGFSA 161
T D+ ++ V Y + P S I IA+I D+ + +++ VG S
Sbjct: 155 TQPFQLDNGQVANVVIKYDASSKILHAVLVYPSSGAIYTIAEIVDVKQVLPEWVDVGLSG 214
Query: 162 ANG-QGSAIYTVDRWRFKTFESYPSGN 187
A G Q A T D + + S P N
Sbjct: 215 ATGAQRDAAETHDVYSWSFQASLPETN 241
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,648,184
Number of Sequences: 62578
Number of extensions: 724207
Number of successful extensions: 4289
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 565
Number of HSP's that attempted gapping in prelim test: 2540
Number of HSP's gapped (non-prelim): 1124
length of query: 596
length of database: 14,973,337
effective HSP length: 104
effective length of query: 492
effective length of database: 8,465,225
effective search space: 4164890700
effective search space used: 4164890700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)