BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047739
(1099 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 192/648 (29%), Positives = 292/648 (45%), Gaps = 86/648 (13%)
Query: 92 LRKLSLRSNSFNGTIPATLAQCTLLRAVFLQYNSLSGNLPANIGNLSNLEILNVAANRLS 151
L+ L++ N +G + +++C L + + N+ S +P +G+ S L+ L+++ N+LS
Sbjct: 177 LKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLS 233
Query: 152 GEIANDLPR--NLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLP 209
G+ + + LK ++SSN F GPIP L LQ ++ + NKF+ E+P G
Sbjct: 234 GDFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGA-- 289
Query: 210 SAIANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSGYPP 269
C +L L GN G +PP G+ L+ ++L+ NN SG +P + G
Sbjct: 290 -----CDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRG--- 341
Query: 270 SIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTR-ASTLTRLDVSGN 328
L+VLDL N+ G P LT +++L LD+S N
Sbjct: 342 --------------------------LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSN 375
Query: 329 SISGKIPAQIGGLWR--LEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFL 386
+ SG I + + L+EL + NN F G +P + CS L L L N SG IP L
Sbjct: 376 NFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 435
Query: 387 GDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLS 446
G + L+ L L N+ G IP + LE L L N L+G +P + NL+ + LS
Sbjct: 436 GSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLS 495
Query: 447 ENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPAXXXXXXXXXXXXXXXQNFSGELPIEL 506
N+ +GE+P IG L L + LS N+FSG IPA F+G +P +
Sbjct: 496 NNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 555
Query: 507 AGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATXXXXXXXXXXXXX 566
K SG + F + RY+ + +G +
Sbjct: 556 F-------------KQSGKIAANF--IAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQ 600
Query: 567 GNHIS-------------GSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDL 613
N +S G P N + L++ N L+G+IP +I + +L +L+L
Sbjct: 601 LNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNL 660
Query: 614 SINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLSGEIPAN 673
N+++G IPDE+ L L ++SN L G IP +++ L+ L +DLS NNLSG IP
Sbjct: 661 GHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE- 719
Query: 674 LSSIFGLMNFNVSSNNLQAFANNQDLCGKPLGRKCE--NADDRDRRKK 719
+ F F NN LCG PL R C+ NAD ++
Sbjct: 720 ------MGQFETFPP--AKFLNNPGLCGYPLPR-CDPSNADGYAHHQR 758
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 223 bits (568), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 192/641 (29%), Positives = 290/641 (45%), Gaps = 86/641 (13%)
Query: 92 LRKLSLRSNSFNGTIPATLAQCTLLRAVFLQYNSLSGNLPANIGNLSNLEILNVAANRLS 151
L+ L++ N +G + +++C L + + N+ S +P +G+ S L+ L+++ N+LS
Sbjct: 180 LKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLS 236
Query: 152 GEIANDLPR--NLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLP 209
G+ + + LK ++SSN F GPIP L LQ ++ + NKF+ E+P G
Sbjct: 237 GDFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGA-- 292
Query: 210 SAIANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSGYPP 269
C +L L GN G +PP G+ L+ ++L+ NN SG +P + G
Sbjct: 293 -----CDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRG--- 344
Query: 270 SIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTR-ASTLTRLDVSGN 328
L+VLDL N+ G P LT +++L LD+S N
Sbjct: 345 --------------------------LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSN 378
Query: 329 SISGKIPAQIGGLWR--LEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFL 386
+ SG I + + L+EL + NN F G +P + CS L L L N SG IP L
Sbjct: 379 NFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 438
Query: 387 GDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLS 446
G + L+ L L N+ G IP + LE L L N L+G +P + NL+ + LS
Sbjct: 439 GSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLS 498
Query: 447 ENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPAXXXXXXXXXXXXXXXQNFSGELPIEL 506
N+ +GE+P IG L L + LS N+FSG IPA F+G +P +
Sbjct: 499 NNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558
Query: 507 AGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATXXXXXXXXXXXXX 566
K SG + F + RY+ + +G +
Sbjct: 559 F-------------KQSGKIAANF--IAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQ 603
Query: 567 GNHIS-------------GSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDL 613
N +S G P N + L++ N L+G+IP +I + +L +L+L
Sbjct: 604 LNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNL 663
Query: 614 SINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLSGEIPAN 673
N+++G IPDE+ L L ++SN L G IP +++ L+ L +DLS NNLSG IP
Sbjct: 664 GHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE- 722
Query: 674 LSSIFGLMNFNVSSNNLQAFANNQDLCGKPLGRKCE--NAD 712
+ F F NN LCG PL R C+ NAD
Sbjct: 723 ------MGQFETFPP--AKFLNNPGLCGYPLPR-CDPSNAD 754
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 179 bits (454), Expect = 7e-45, Method: Composition-based stats.
Identities = 110/298 (36%), Positives = 169/298 (56%), Gaps = 18/298 (6%)
Query: 792 KITLAETVEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLD--ENLFRKEA 849
+ +L E A+ F +N+L R +G V+K DG +++++RL + E F+ E
Sbjct: 27 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEV 86
Query: 850 EFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLI 909
E + HRNL LRG+ P RLLVY YM NG++ + L+E + L+WP R I
Sbjct: 87 EMISMAVHRNLLRLRGF-CMTPTERLLVYPYMANGSVASCLRERP-ESQPPLDWPKRQRI 144
Query: 910 ALGVARGLAFLHT---SNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXX 966
ALG ARGLA+LH ++H D+K N+L D +FEA + DFGL +L
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 204
Query: 967 XVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP---VMFTQDEDI--VKWVKK 1021
GT+G+++PE TG++++++DV+ +G++LLEL+TG+R D+D+ + WVK
Sbjct: 205 --GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 262
Query: 1022 QLQKGQITXXXXXXXXXXXXXXXXWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEG 1079
L++ ++ EE ++VALLCT P++RP MS++V MLEG
Sbjct: 263 LLKEKKLEALVDVDLQGNYKD----EEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant
Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 177 bits (448), Expect = 4e-44, Method: Composition-based stats.
Identities = 109/298 (36%), Positives = 168/298 (56%), Gaps = 18/298 (6%)
Query: 792 KITLAETVEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLD--ENLFRKEA 849
+ +L E A+ F +N+L R +G V+K DG +++++RL + E F+ E
Sbjct: 19 RFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEV 78
Query: 850 EFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLI 909
E + HRNL LRG+ P RLLVY YM NG++ + L+E + L+WP R I
Sbjct: 79 EMISMAVHRNLLRLRGF-CMTPTERLLVYPYMANGSVASCLRERP-ESQPPLDWPKRQRI 136
Query: 910 ALGVARGLAFLHT---SNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXX 966
ALG ARGLA+LH ++H D+K N+L D +FEA + DFGL +L
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 196
Query: 967 XVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP---VMFTQDEDI--VKWVKK 1021
G +G+++PE TG++++++DV+ +G++LLEL+TG+R D+D+ + WVK
Sbjct: 197 --GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254
Query: 1022 QLQKGQITXXXXXXXXXXXXXXXXWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEG 1079
L++ ++ EE ++VALLCT P++RP MS++V MLEG
Sbjct: 255 LLKEKKLEALVDVDLQGNYKD----EEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 129 bits (324), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 143/291 (49%), Gaps = 11/291 (3%)
Query: 792 KITLAETVEATRQFDEENVLSRTRYGLVFKACYNDGMVLSI-RRLPDGSLDENLFRKEAE 850
++ L + EAT FD + ++ +G V+K DG +++ RR P+ S F E E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 851 FLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIA 910
L RH +L L G+ ++ +L+Y YM NGNL L S ++W R I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEM-ILIYKYMENGNLKRHLY-GSDLPTMSMSWEQRLEIC 145
Query: 911 LGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGT 970
+G ARGL +LHT ++H D+K N+L D +F ++DFG+ + GT
Sbjct: 146 IGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK-KGTELGQTHLXXVVKGT 204
Query: 971 LGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIV---KWVKKQLQKGQ 1027
LGY+ PE + G T++SDVYSFG+VL E+L + ++ + ++V +W + GQ
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 1028 ITXXXXXXXXXXXXXXXXWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLE 1078
+ E A+ C A DRP+M D+++ LE
Sbjct: 265 LEQIVDPNLADKIRP----ESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 143/291 (49%), Gaps = 11/291 (3%)
Query: 792 KITLAETVEATRQFDEENVLSRTRYGLVFKACYNDGMVLSI-RRLPDGSLDENLFRKEAE 850
++ L + EAT FD + ++ +G V+K DG +++ RR P+ S F E E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 851 FLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIA 910
L RH +L L G+ ++ +L+Y YM NGNL L S ++W R I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEM-ILIYKYMENGNLKRHLY-GSDLPTMSMSWEQRLEIC 145
Query: 911 LGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGT 970
+G ARGL +LHT ++H D+K N+L D +F ++DFG+ + GT
Sbjct: 146 IGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK-KGTELDQTHLXXVVKGT 204
Query: 971 LGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIV---KWVKKQLQKGQ 1027
LGY+ PE + G T++SDVYSFG+VL E+L + ++ + ++V +W + GQ
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 1028 ITXXXXXXXXXXXXXXXXWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLE 1078
+ E A+ C A DRP+M D+++ LE
Sbjct: 265 LEQIVDPNLADKIRP----ESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 122/225 (54%), Gaps = 19/225 (8%)
Query: 791 NKITLAETVEATRQFDEE------NVLSRTRYGLVFKACYNDGMVLSIRRLP---DGSLD 841
+ + E T FDE N + +G+V+K N+ V ++++L D + +
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTE 71
Query: 842 E--NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGH 899
E F +E + + K +H NL L G+ + DL LVY YMPNG +LL S DG
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDL-CLVYVYMPNG---SLLDRLSCLDGT 127
Query: 900 V-LNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXX 958
L+W MR IA G A G+ FLH ++ +H DIK N+L D F A +SDFGL R
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR-ASEKF 186
Query: 959 XXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTG 1003
VGT Y++PE AL GE T +SD+YSFG+VLLE++TG
Sbjct: 187 AQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/225 (39%), Positives = 123/225 (54%), Gaps = 19/225 (8%)
Query: 791 NKITLAETVEATRQFDEE------NVLSRTRYGLVFKACYNDGMVLSIRRLP---DGSLD 841
+ + E T FDE N + +G+V+K N+ V ++++L D + +
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTE 71
Query: 842 E--NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGH 899
E F +E + + K +H NL L G+ + DL LVY YMPNG +LL S DG
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDL-CLVYVYMPNG---SLLDRLSCLDGT 127
Query: 900 V-LNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXX 958
L+W MR IA G A G+ FLH ++ +H DIK N+L D F A +SDFGL R
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR-ASEKF 186
Query: 959 XXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTG 1003
VGT Y++PE AL GE T +SD+YSFG+VLLE++TG
Sbjct: 187 AQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/225 (40%), Positives = 124/225 (55%), Gaps = 19/225 (8%)
Query: 791 NKITLAETVEATRQFDEE------NVLSRTRYGLVFKACYNDGMVLSIRRLP---DGSLD 841
+ + E T FDE N + +G+V+K N+ V ++++L D + +
Sbjct: 7 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTE 65
Query: 842 E--NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGH 899
E F +E + + K +H NL L G+ + DL LVY YMPNG +LL S DG
Sbjct: 66 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDL-CLVYVYMPNG---SLLDRLSCLDGT 121
Query: 900 V-LNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXX 958
L+W MR IA G A G+ FLH ++ +H DIK N+L D F A +SDFGL R
Sbjct: 122 PPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR-ASEKF 180
Query: 959 XXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTG 1003
VGT Y++PE AL GE T +SD+YSFG+VLLE++TG
Sbjct: 181 AQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 119/225 (52%), Gaps = 19/225 (8%)
Query: 791 NKITLAETVEATRQFDEE------NVLSRTRYGLVFKACYNDGMVLSIRRLP---DGSLD 841
+ + E T FDE N +G+V+K N+ V ++++L D + +
Sbjct: 4 HSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTE 62
Query: 842 E--NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGH 899
E F +E + K +H NL L G+ + DL LVY Y PNG +LL S DG
Sbjct: 63 ELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDL-CLVYVYXPNG---SLLDRLSCLDGT 118
Query: 900 V-LNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXX 958
L+W R IA G A G+ FLH ++ +H DIK N+L D F A +SDFGL R
Sbjct: 119 PPLSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR-ASEKF 177
Query: 959 XXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTG 1003
VGT Y +PE AL GE T +SD+YSFG+VLLE++TG
Sbjct: 178 AQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 118/241 (48%), Gaps = 6/241 (2%)
Query: 315 TRASTLTRLDVSGNSISGK--IPAQIGGLWRLEELKMAN-NSFGGAVPVEIKQCSSLSLL 371
T+ + LD+SG ++ IP+ + L L L + N+ G +P I + + L L
Sbjct: 47 TQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYL 106
Query: 372 DLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLP 431
+ SG IP+FL I+ L +L + N SG++P S +LP L + N +SG++P
Sbjct: 107 YITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP 166
Query: 432 EEVLGMNNL-STLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPAXXXXXXXXXX 490
+ + L +++ +S N+ +G++P + NL+ L +LS N G
Sbjct: 167 DSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQK 225
Query: 491 XXXXXQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQI 550
+ + +L ++ NL + L+ N++ G +P+G + L L LN+SFN G+I
Sbjct: 226 IHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI 284
Query: 551 P 551
P
Sbjct: 285 P 285
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 105/232 (45%), Gaps = 34/232 (14%)
Query: 497 NFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATXXX 556
N G +P +A L L + + +SG +P+ S + +L L+ S+N G +P +
Sbjct: 88 NLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISS 147
Query: 557 XXXXXXXXXXGNHISGSIPPELGNCSDL-EVLELRSNSLTGHIPTDISHLSHLNVLDLSI 615
GN ISG+IP G+ S L + + N LTG IP ++L +L +DLS
Sbjct: 148 LPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSR 206
Query: 616 NNLTGEIP-----------------------DEISKCSSLRSLLVNSNHLSGGIPDSLAK 652
N L G+ ++ +L L + +N + G +P L +
Sbjct: 207 NMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQ 266
Query: 653 LSNLAVLDLSANNLSGEIPANLSSIFGLMNFNVSSNNLQAFANNQDLCGKPL 704
L L L++S NNL GEIP L F+VS A+ANN+ LCG PL
Sbjct: 267 LKFLHSLNVSFNNLCGEIPQG----GNLQRFDVS-----AYANNKCLCGSPL 309
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 122/286 (42%), Gaps = 31/286 (10%)
Query: 342 WRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGE--IPEFLGDIRGLKSLTLAA 399
W L N ++ G + Q ++ LDL G IP L ++ L L +
Sbjct: 27 W-LPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGG 85
Query: 400 -NLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASI 458
N G IP + L L L + H ++SG++P+ + + L TLD S N SG +P SI
Sbjct: 86 INNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSI 145
Query: 459 GNLSQLMVFNLSGNAFSGRIPAXXXXXXXXXXXXXXXQN-FSGELPIELAGLPNLQVIAL 517
+L L+ GN SG IP +N +G++P A L NL + L
Sbjct: 146 SSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDL 204
Query: 518 QENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATXXXXXXXXXXXXXGNHISGSIPPE 577
N L G+ F S + + ++L+ N + +
Sbjct: 205 SRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-------------------------K 239
Query: 578 LGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIP 623
+G +L L+LR+N + G +P ++ L L+ L++S NNL GEIP
Sbjct: 240 VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 102/238 (42%), Gaps = 39/238 (16%)
Query: 170 NGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNALG 229
N GPIP +I+ L+QL + + S G +P ++ +LV L NAL
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVS--------GAIPDFLSQIKTLVTLDFSYNALS 138
Query: 230 GVIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPET 289
G +PP+I +LP L ++ N +SG +P S
Sbjct: 139 GTLPPSISSLPNLVGITFDGNRISGAIPDSY----------------------------- 169
Query: 290 GSCSSVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKM 349
GS S + + + +N++ G P + L +D+S N + G G +++ +
Sbjct: 170 GSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHL 228
Query: 350 ANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIP 407
A NS + ++ +L+ LDL NR G +P+ L ++ L SL ++ N G IP
Sbjct: 229 AKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 25/200 (12%)
Query: 304 NQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIK 363
N + G P + + + L L ++ ++SG IP + + L L + N+ G +P I
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 364 QCSSLSLLDLEGNRFSGEIPEFLGDIRGL-KSLTLAANLFSGSIPASFRNL--------- 413
+L + +GNR SG IP+ G L S+T++ N +G IP +F NL
Sbjct: 147 SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSR 206
Query: 414 --------------PGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIG 459
+ ++L NSL+ L + L NL+ LDL N+ G +P +
Sbjct: 207 NMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLS-KNLNGLDLRNNRIYGTLPQGLT 265
Query: 460 NLSQLMVFNLSGNAFSGRIP 479
L L N+S N G IP
Sbjct: 266 QLKFLHSLNVSFNNLCGEIP 285
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 25/170 (14%)
Query: 513 QVIALQENKLSG-NVPEGF---SSLMSLRYLNLSFNGFVGQIPATXXXXXXXXXXXXXGN 568
Q + LSG N+P+ + SSL +L YLN + G + N
Sbjct: 48 QTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGI--------------------N 87
Query: 569 HISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISK 628
++ G IPP + + L L + +++G IP +S + L LD S N L+G +P IS
Sbjct: 88 NLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISS 147
Query: 629 CSSLRSLLVNSNHLSGGIPDSLAKLSNL-AVLDLSANNLSGEIPANLSSI 677
+L + + N +SG IPDS S L + +S N L+G+IP +++
Sbjct: 148 LPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL 197
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 14/241 (5%)
Query: 208 LPSAIANCSSLVHLSAQG-NALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSG 266
+PS++AN L L G N L G IPPAI L +L + + N+SG +P +
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFL-----S 122
Query: 267 YPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTL-TRLDV 325
++ + +NA + P S +++ + N+I GA P S L T + +
Sbjct: 123 QIKTLVTLDFSYNALSGTLPPSISSLPNLVGI-TFDGNRISGAIPDSYGSFSKLFTSMTI 181
Query: 326 SGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEF 385
S N ++GKIP L L + ++ N G V + + L N + ++ +
Sbjct: 182 SRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK- 239
Query: 386 LGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDL 445
+G + L L L N G++P L L +LN+ N+L G +P+ NL D+
Sbjct: 240 VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG----GNLQRFDV 295
Query: 446 S 446
S
Sbjct: 296 S 296
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 598 IPTDISHLSHLNVLDLS-INNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNL 656
IP+ +++L +LN L + INNL G IP I+K + L L + ++SG IPD L+++ L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 657 AVLDLSANNLSGEIPANLSSIFGLMNFNVSSNNLQA 692
LD S N LSG +P ++SS+ L+ N +
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISG 163
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 112/279 (40%), Gaps = 51/279 (18%)
Query: 28 EALTSFKLNLHDPLGALNGWDSSTPAAPCDWRGVACTNN----RVTELRLPRLQLS---- 79
+AL K +L +P L+ W +T W GV C + RV L L L L
Sbjct: 9 QALLQIKKDLGNPT-TLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYP 67
Query: 80 -----------------------GRISDHLSNLRMLRKLSLRSNSFNGTIPATLAQCTLL 116
G I ++ L L L + + +G IP L+Q L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 117 RAVFLQYNSLSGNLPANIGNLSNLEILNVAANRLSGEIANDLPRNLKYF---DLSSNGFS 173
+ YN+LSG LP +I +L NL + NR+SG I + K F +S N +
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 174 GPIPTSISNLSQLQLINFSFNKFSREVPATF---EGTLPSAIANCS------------SL 218
G IP + +NL+ L ++ S N + F + T +A S +L
Sbjct: 188 GKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNL 246
Query: 219 VHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVP 257
L + N + G +P + L L ++++ NNL G +P
Sbjct: 247 NGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Query: 574 IPPELGNCSDLEVLELRS-NSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSL 632
IP L N L L + N+L G IP I+ L+ L+ L ++ N++G IPD +S+ +L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 633 RSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLSGEIPANLSSIFGLM-NFNVSSNNL 690
+L + N LSG +P S++ L NL + N +SG IP + S L + +S N L
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 7/190 (3%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875
+G V+ +N ++I+ L G++ F +EA+ + K+RH L L + P
Sbjct: 280 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-- 337
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +YM G+L L+ + G L P +A +A G+A++ N VH D++ N+
Sbjct: 338 IVTEYMSKGSLLDFLK---GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 394
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L + ++DFGL RL + + +PEAAL G T +SDV+SFGI
Sbjct: 395 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 452
Query: 996 VLLELLTGKR 1005
+L EL T R
Sbjct: 453 LLTELTTKGR 462
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 90.9 bits (224), Expect = 3e-18, Method: Composition-based stats.
Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 8/212 (3%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870
L ++G V+ +N ++I+ L G++ F +EA+ + K++H L L +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEE 76
Query: 871 PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDI 930
P +V +YM G+L L++ +G L P +A VA G+A++ N +H D+
Sbjct: 77 P--IYIVTEYMNKGSLLDFLKDG---EGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDL 131
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDV 990
+ N+L ++DFGL RL + + +PEAAL G T +SDV
Sbjct: 132 RSANILVGNGLICKIADFGLARLIEDNEXTARQGAKF--PIKWTAPEAALYGRFTIKSDV 189
Query: 991 YSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
+SFGI+L EL+T G+ P + ++++ V++
Sbjct: 190 WSFGILLTELVTKGRVPYPGMNNREVLEQVER 221
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src, In
Complex With Amp-pnp
Length = 452
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 7/190 (3%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875
+G V+ +N ++I+ L G++ F +EA+ + K+RH L L + P
Sbjct: 197 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-- 254
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +YM G+L L+ + G L P +A +A G+A++ N VH D++ N+
Sbjct: 255 IVTEYMSKGSLLDFLK---GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 311
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L + ++DFGL RL + + +PEAAL G T +SDV+SFGI
Sbjct: 312 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 369
Query: 996 VLLELLTGKR 1005
+L EL T R
Sbjct: 370 LLTELTTKGR 379
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 7/190 (3%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875
+G V+ +N ++I+ L G++ F +EA+ + K+RH L L + P
Sbjct: 197 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-- 254
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +YM G+L L+ + G L P +A +A G+A++ N VH D++ N+
Sbjct: 255 IVTEYMSKGSLLDFLK---GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 311
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L + ++DFGL RL + + +PEAAL G T +SDV+SFGI
Sbjct: 312 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 369
Query: 996 VLLELLTGKR 1005
+L EL T R
Sbjct: 370 LLTELTTKGR 379
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 122/284 (42%), Gaps = 35/284 (12%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875
+G V+ +N ++I+ L G++ F +EA+ + K+RH L L + P
Sbjct: 198 FGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-- 255
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +YM G+L L+ + G L P +A +A G+A++ N VH D++ N+
Sbjct: 256 IVTEYMSKGSLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 312
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L + ++DFGL RL + + +PEAAL G T +SDV+SFGI
Sbjct: 313 LVGENLVCKVADFGLGRLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 370
Query: 996 VLLELLTGKR---PVMFTQDEDIVKWVKKQLQKGQITXXXXXXXXXXXXXXXXWEEFLLG 1052
+L EL T R P M ++ V Q+++G
Sbjct: 371 LLTELTTKGRVPYPGMVNRE------VLDQVERGYRMPCPPECPESLH------------ 412
Query: 1053 VKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPDIPSSADPTTQP 1096
+ C DP +RPT + LE D +S +P QP
Sbjct: 413 -DLMCQCWRKDPEERPTFEYLQAFLE------DYFTSTEPQXQP 449
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant)
In Complex With N6-Benzyl Adp
Length = 452
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 7/190 (3%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875
+G V+ +N ++I+ L G++ F +EA+ + K+RH L L + P
Sbjct: 197 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-- 254
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +YM G+L L+ + G L P +A +A G+A++ N VH D++ N+
Sbjct: 255 IVGEYMSKGSLLDFLK---GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 311
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L + ++DFGL RL + + +PEAAL G T +SDV+SFGI
Sbjct: 312 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 369
Query: 996 VLLELLTGKR 1005
+L EL T R
Sbjct: 370 LLTELTTKGR 379
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 89.7 bits (221), Expect = 8e-18, Method: Composition-based stats.
Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 7/190 (3%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875
+G V+ +N ++I+ L G++ F +EA+ + K+RH L L + P
Sbjct: 21 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP--IX 78
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +YM G+L L+ + G L P +A +A G+A++ N VH D++ N+
Sbjct: 79 IVTEYMSKGSLLDFLK---GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 135
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L + ++DFGL RL + + +PEAAL G T +SDV+SFGI
Sbjct: 136 LVGENLVCKVADFGLARLIEDNEXTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 193
Query: 996 VLLELLTGKR 1005
+L EL T R
Sbjct: 194 LLTELTTKGR 203
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 89.7 bits (221), Expect = 9e-18, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 7/190 (3%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875
+G V+ +N ++I+ L G++ F +EA+ + K+RH L L + P
Sbjct: 28 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP--IY 85
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +YM N G+LL + G L P ++ +A G+A++ N VH D++ N+
Sbjct: 86 IVTEYM---NKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANI 142
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L + ++DFGL RL + + +PEAAL G T +SDV+SFGI
Sbjct: 143 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 200
Query: 996 VLLELLTGKR 1005
+L EL T R
Sbjct: 201 LLTELTTKGR 210
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 89.7 bits (221), Expect = 9e-18, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 7/190 (3%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875
+G V+ +N ++I+ L G++ F +EA+ + K+RH L L + P
Sbjct: 24 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP--IY 81
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +YM G+L L+ + G L P +A +A G+A++ N VH D++ N+
Sbjct: 82 IVTEYMSKGSLLDFLK---GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 138
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L + ++DFGL RL + + +PEAAL G T +SDV+SFGI
Sbjct: 139 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 196
Query: 996 VLLELLTGKR 1005
+L EL T R
Sbjct: 197 LLTELTTKGR 206
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Pyrazolopyrimidine 5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Pyrazolopyrimidine 5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Dasatinib
Length = 286
Score = 89.4 bits (220), Expect = 1e-17, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 7/190 (3%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875
+G V+ +N ++I+ L G++ F +EA+ + K+RH L L + P
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEEP--IY 88
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +YM G+L L+ + G L P +A +A G+A++ N VH D++ N+
Sbjct: 89 IVTEYMSKGSLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 145
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L + ++DFGL RL + + +PEAAL G T +SDV+SFGI
Sbjct: 146 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 996 VLLELLTGKR 1005
+L EL T R
Sbjct: 204 LLTELTTKGR 213
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 89.4 bits (220), Expect = 1e-17, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 7/190 (3%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875
+G V+ +N ++I+ L G++ F +EA+ + K+RH L L + P
Sbjct: 28 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP--IY 85
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +YM N G+LL + G L P ++ +A G+A++ N VH D++ N+
Sbjct: 86 IVTEYM---NKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANI 142
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L + ++DFGL RL + + +PEAAL G T +SDV+SFGI
Sbjct: 143 LVGENLVCKVADFGLARLIEDNEWTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 200
Query: 996 VLLELLTGKR 1005
+L EL T R
Sbjct: 201 LLTELTTKGR 210
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 89.0 bits (219), Expect = 1e-17, Method: Composition-based stats.
Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 7/190 (3%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875
+G V+ +N ++I+ L G++ F +EA+ + K+RH L L + P
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP--IY 88
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +YM G+L L+ + G L P +A +A G+A++ N VH D++ N+
Sbjct: 89 IVIEYMSKGSLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 145
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L + ++DFGL RL + + +PEAAL G T +SDV+SFGI
Sbjct: 146 LVGENLVCKVADFGLARLIEDNEXTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 996 VLLELLTGKR 1005
+L EL T R
Sbjct: 204 LLTELTTKGR 213
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 89.0 bits (219), Expect = 1e-17, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 7/190 (3%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875
+G V+ +N ++I+ L G++ F +EA+ + K+RH L L + P
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP--IY 88
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +YM G+L L+ + G L P +A +A G+A++ N VH D++ N+
Sbjct: 89 IVIEYMSKGSLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 145
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L + ++DFGL RL + + +PEAAL G T +SDV+SFGI
Sbjct: 146 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 996 VLLELLTGKR 1005
+L EL T R
Sbjct: 204 LLTELTTKGR 213
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc1
Length = 275
Score = 88.6 bits (218), Expect = 2e-17, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 7/190 (3%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875
+G V+ +N ++I+ L G++ F +EA+ + K+RH L L + P
Sbjct: 20 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP--IY 77
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +YM G+L L+ + G L P +A +A G+A++ N VH D++ N+
Sbjct: 78 IVTEYMSKGSLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 134
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L + ++DFGL RL + + +PEAAL G T +SDV+SFGI
Sbjct: 135 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 192
Query: 996 VLLELLTGKR 1005
+L EL T R
Sbjct: 193 LLTELTTKGR 202
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 88.6 bits (218), Expect = 2e-17, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 7/190 (3%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875
+G V+ +N ++I+ L G++ F +EA+ + K+RH L L + P
Sbjct: 22 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP--IY 79
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +YM G+L L+ + G L P +A +A G+A++ N VH D++ N+
Sbjct: 80 IVTEYMSKGSLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 136
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L + ++DFGL RL + + +PEAAL G T +SDV+SFGI
Sbjct: 137 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 194
Query: 996 VLLELLTGKR 1005
+L EL T R
Sbjct: 195 LLTELTTKGR 204
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex
With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In Complex
With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds That
Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds That
Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 88.6 bits (218), Expect = 2e-17, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 7/190 (3%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875
+G V+ +N ++I+ L G++ F +EA+ + K+RH L L + P
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP--IY 88
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +YM G+L L+ + G L P +A +A G+A++ N VH D++ N+
Sbjct: 89 IVTEYMSKGSLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 145
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L + ++DFGL RL + + +PEAAL G T +SDV+SFGI
Sbjct: 146 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 996 VLLELLTGKR 1005
+L EL T R
Sbjct: 204 LLTELTTKGR 213
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 88.2 bits (217), Expect = 2e-17, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 7/190 (3%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875
+G V+ +N ++I+ L G++ F +EA+ + K+RH L L + P
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP--IY 88
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +YM G+L L+ + G L P +A +A G+A++ N VH D++ N+
Sbjct: 89 IVCEYMSKGSLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 145
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L + ++DFGL RL + + +PEAAL G T +SDV+SFGI
Sbjct: 146 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 996 VLLELLTGKR 1005
+L EL T R
Sbjct: 204 LLTELTTKGR 213
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Inhibitor
Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Inhibitor
Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 87.4 bits (215), Expect = 3e-17, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 7/190 (3%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875
+G V+ +N ++I+ L G++ F +EA+ + K+RH L L + P
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP--IY 88
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +YM G L L+ + G L P +A +A G+A++ N VH D++ N+
Sbjct: 89 IVMEYMSKGCLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 145
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L + ++DFGL RL + + +PEAAL G T +SDV+SFGI
Sbjct: 146 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 996 VLLELLTGKR 1005
+L EL T R
Sbjct: 204 LLTELTTKGR 213
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 87.4 bits (215), Expect = 4e-17, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 7/190 (3%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875
+G V+ +N ++I+ L G++ F +EA+ + K+RH L L + P
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP--IY 88
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +YM G+L L+ + G L P +A +A G+A++ N VH D+ N+
Sbjct: 89 IVTEYMSKGSLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANI 145
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L + ++DFGL RL + + +PEAAL G T +SDV+SFGI
Sbjct: 146 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 996 VLLELLTGKR 1005
+L EL T R
Sbjct: 204 LLTELTTKGR 213
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 87.4 bits (215), Expect = 4e-17, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 7/190 (3%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875
+G V+ +N ++I+ L G++ F +EA+ + K+RH L L + P
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP--IY 88
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +YM G L L+ + G L P +A +A G+A++ N VH D++ N+
Sbjct: 89 IVTEYMSKGCLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 145
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L + ++DFGL RL + + +PEAAL G T +SDV+SFGI
Sbjct: 146 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 996 VLLELLTGKR 1005
+L EL T R
Sbjct: 204 LLTELTTKGR 213
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 91/166 (54%), Gaps = 8/166 (4%)
Query: 843 NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLN 902
N F +E + ++RH N+ + G P+L + V +Y+ G+L LL ++ ++ L+
Sbjct: 79 NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSI-VTEYLSRGSLYRLLHKSGAREQ--LD 135
Query: 903 WPMRHLIALGVARGLAFLHTSN--MVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXX 960
R +A VA+G+ +LH N +VH D+K N+L D + + DFGL RL
Sbjct: 136 ERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLX 195
Query: 961 XXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
GT +++PE + ++SDVYSFG++L EL T ++P
Sbjct: 196 SKXA---AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 8/166 (4%)
Query: 843 NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLN 902
N F +E + ++RH N+ + G P+L + V +Y+ G+L LL ++ ++ L+
Sbjct: 79 NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSI-VTEYLSRGSLYRLLHKSGAREQ--LD 135
Query: 903 WPMRHLIALGVARGLAFLHTSN--MVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXX 960
R +A VA+G+ +LH N +VH ++K N+L D + + DFGL RL
Sbjct: 136 ERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS 195
Query: 961 XXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
GT +++PE + ++SDVYSFG++L EL T ++P
Sbjct: 196 SKSA---AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 83.6 bits (205), Expect = 5e-16, Method: Composition-based stats.
Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 31/289 (10%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870
L ++G V+ YN ++++ L GS+ + F EA + +++H+ L L
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 88
Query: 871 PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDI 930
P ++ +YM NG+L L+ S G L +A +A G+AF+ N +H D+
Sbjct: 89 P--IYIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 143
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDV 990
+ N+L ++DFGL RL + + +PEA G T +SDV
Sbjct: 144 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAINYGTFTIKSDV 201
Query: 991 YSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITXXXXXXXXXXXXXXXXWEEF 1049
+SFGI+L E++T G+ P + +++ + L++G EE
Sbjct: 202 WSFGILLTEIVTHGRIPYPGMTNPEVI----QNLERGYRMVRPDNCP----------EEL 247
Query: 1050 LLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPDIPSSADPTTQPSP 1098
++ LC P DRPT + +LE D ++ + QP P
Sbjct: 248 Y---QLMRLCWKERPEDRPTFDYLRSVLE------DFFTATEGQYQPQP 287
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
Length = 285
Score = 83.6 bits (205), Expect = 5e-16, Method: Composition-based stats.
Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 31/289 (10%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870
L ++G V+ YN ++++ L GS+ + F EA + +++H+ L L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 86
Query: 871 PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDI 930
P ++ +YM NG+L L+ S G L +A +A G+AF+ N +H D+
Sbjct: 87 P--IYIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 141
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDV 990
+ N+L ++DFGL RL + + +PEA G T +SDV
Sbjct: 142 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAINYGTFTIKSDV 199
Query: 991 YSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITXXXXXXXXXXXXXXXXWEEF 1049
+SFGI+L E++T G+ P + +++ + L++G EE
Sbjct: 200 WSFGILLTEIVTHGRIPYPGMTNPEVI----QNLERGYRMVRPDNCP----------EEL 245
Query: 1050 LLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPDIPSSADPTTQPSP 1098
++ LC P DRPT + +LE D ++ + QP P
Sbjct: 246 Y---QLMRLCWKERPEDRPTFDYLRSVLE------DFFTATEGQYQPQP 285
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In
Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In
Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 83.6 bits (205), Expect = 5e-16, Method: Composition-based stats.
Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 31/289 (10%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870
L ++G V+ YN ++++ L GS+ + F EA + +++H+ L L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 871 PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDI 930
P ++ +YM NG+L L+ S G L +A +A G+AF+ N +H D+
Sbjct: 81 P--IYIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 135
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDV 990
+ N+L ++DFGL RL + + +PEA G T +SDV
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAINYGTFTIKSDV 193
Query: 991 YSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITXXXXXXXXXXXXXXXXWEEF 1049
+SFGI+L E++T G+ P + +++ + L++G EE
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPEVI----QNLERGYRMVRPDNCP----------EEL 239
Query: 1050 LLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPDIPSSADPTTQPSP 1098
++ LC P DRPT + +LE D ++ + QP P
Sbjct: 240 Y---QLMRLCWKERPEDRPTFDYLRSVLE------DFFTATEGQYQPQP 279
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii-
38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F EA +G+ H N+ L G + + ++V +YM NG+L + L++ H +
Sbjct: 81 FLGEASIMGQFDHPNIIRLEGVVTKSKPV-MIVTEYMENGSLDSFLRK------HDAQFT 133
Query: 905 MRHLIAL--GVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ L+ + G+A G+ +L VH D+ +N+L +++ +SDFGL R+
Sbjct: 134 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 193
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
+ + SPEA + T SDV+S+GIVL E+++ G+RP ++D++K V +
Sbjct: 194 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 253
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F EA +G+ H N+ L G + + ++V +YM NG+L + L++ H +
Sbjct: 64 FLGEASIMGQFDHPNIIRLEGVVTKSKPV-MIVTEYMENGSLDSFLRK------HDAQFT 116
Query: 905 MRHLIAL--GVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ L+ + G+A G+ +L VH D+ +N+L +++ +SDFGL R+
Sbjct: 117 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 176
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
+ + SPEA + T SDV+S+GIVL E+++ G+RP ++D++K V +
Sbjct: 177 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 236
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 83.6 bits (205), Expect = 6e-16, Method: Composition-based stats.
Identities = 74/289 (25%), Positives = 126/289 (43%), Gaps = 31/289 (10%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870
L ++G V+ YN ++++ L GS+ + F EA + +++H+ L L
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 90
Query: 871 PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDI 930
P ++ +YM NG+L L+ S G L +A +A G+AF+ N +H D+
Sbjct: 91 P--IYIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 145
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDV 990
+ N+L ++DFGL RL + + +PEA G T +SDV
Sbjct: 146 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF--PIKWTAPEAINYGTFTIKSDV 203
Query: 991 YSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITXXXXXXXXXXXXXXXXWEEF 1049
+SFGI+L E++T G+ P + +++ + L++G EE
Sbjct: 204 WSFGILLTEIVTHGRIPYPGMTNPEVI----QNLERGYRMVRPDNCP----------EEL 249
Query: 1050 LLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPDIPSSADPTTQPSP 1098
++ LC P DRPT + +LE D ++ + QP P
Sbjct: 250 Y---QLMRLCWKERPEDRPTFDYLRSVLE------DFFTATEGQYQPQP 289
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 83.6 bits (205), Expect = 6e-16, Method: Composition-based stats.
Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 31/289 (10%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870
L ++G V+ YN ++++ L GS+ + F EA + +++H+ L L
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 89
Query: 871 PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDI 930
P ++ +YM NG+L L+ S G L +A +A G+AF+ N +H D+
Sbjct: 90 P--IYIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 144
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDV 990
+ N+L ++DFGL RL + + +PEA G T +SDV
Sbjct: 145 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAINYGTFTIKSDV 202
Query: 991 YSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITXXXXXXXXXXXXXXXXWEEF 1049
+SFGI+L E++T G+ P + +++ + L++G EE
Sbjct: 203 WSFGILLTEIVTHGRIPYPGMTNPEVI----QNLERGYRMVRPDNCP----------EEL 248
Query: 1050 LLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPDIPSSADPTTQPSP 1098
++ LC P DRPT + +LE D ++ + QP P
Sbjct: 249 Y---QLMRLCWKERPEDRPTFDYLRSVLE------DFFTATEGQFQPQP 288
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F EA +G+ H N+ L G + + ++V +YM NG+L + L++ H +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPV-MIVTEYMENGSLDSFLRK------HDAQFT 145
Query: 905 MRHLIAL--GVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ L+ + G+A G+ +L VH D+ +N+L +++ +SDFGL R+
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
+ + SPEA + T SDV+S+GIVL E+++ G+RP ++D++K V +
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F EA +G+ H N+ L G + + ++V +YM NG+L + L++ H +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPV-MIVTEYMENGSLDSFLRK------HDAQFT 145
Query: 905 MRHLIAL--GVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ L+ + G+A G+ +L VH D+ +N+L +++ +SDFGL R+
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
+ + SPEA + T SDV+S+GIVL E+++ G+RP ++D++K V +
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F EA +G+ H N+ L G + + ++V +YM NG+L + L++ H +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPV-MIVTEYMENGSLDSFLRK------HDAQFT 145
Query: 905 MRHLIAL--GVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ L+ + G+A G+ +L VH D+ +N+L +++ +SDFGL R+
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
+ + SPEA + T SDV+S+GIVL E+++ G+RP ++D++K V +
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F EA +G+ H N+ L G + + ++V +YM NG+L + L++ H +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPV-MIVTEYMENGSLDSFLRK------HDAQFT 145
Query: 905 MRHLIAL--GVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ L+ + G+A G+ +L VH D+ +N+L +++ +SDFGL R+
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
+ + SPEA + T SDV+S+GIVL E+++ G+RP ++D++K V +
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Phosphorylated,
Amp-pnp Bound
Length = 373
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F EA +G+ H N+ L G + + ++V +YM NG+L + L++ H +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPV-MIVTEYMENGSLDSFLRK------HDAQFT 145
Query: 905 MRHLIAL--GVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ L+ + G+A G+ +L VH D+ +N+L +++ +SDFGL R+
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
+ + SPEA + T SDV+S+GIVL E+++ G+RP ++D++K V +
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F EA +G+ H N+ L G + + ++V +YM NG+L + L++ H +
Sbjct: 91 FLGEASIMGQFDHPNIIRLEGVVTKSKPV-MIVTEYMENGSLDSFLRK------HDAQFT 143
Query: 905 MRHLIAL--GVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ L+ + G+A G+ +L VH D+ +N+L +++ +SDFGL R+
Sbjct: 144 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 203
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
+ + SPEA + T SDV+S+GIVL E+++ G+RP ++D++K V +
Sbjct: 204 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 263
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 16/219 (7%)
Query: 808 ENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYY 867
E L ++G V+ A YN ++++ + GS+ F EA + ++H L L
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 79
Query: 868 AGAPDLRLLVYDYMPNGNLGTLLQ--EASHQDGHVLNWPMRHLIALG--VARGLAFLHTS 923
P ++ ++M G+L L+ E S Q P+ LI +A G+AF+
Sbjct: 80 TKEP--IYIITEFMAKGSLLDFLKSDEGSKQ-------PLPKLIDFSAQIAEGMAFIEQR 130
Query: 924 NMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGE 983
N +H D++ N+L A ++DFGL R+ + + +PEA G
Sbjct: 131 NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF--PIKWTAPEAINFGS 188
Query: 984 TTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
T +SDV+SFGI+L+E++T G+ P + ++++ +++
Sbjct: 189 FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 227
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g
Triple Mutant
Length = 373
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F EA +G+ H N+ L G + + ++V +YM NG+L + L++ H +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPV-MIVTEYMENGSLDSFLRK------HDAQFT 145
Query: 905 MRHLIAL--GVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ L+ + G+A G+ +L VH D+ +N+L +++ +SDFGL R+
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAY 205
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
+ + SPEA + T SDV+S+GIVL E+++ G+RP ++D++K V +
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 7/195 (3%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870
L ++G V+ YN ++++ L GS+ + F EA + +++H+ L L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 871 PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDI 930
P ++ +YM NG+L L+ S G L +A +A G+AF+ N +H D+
Sbjct: 81 P--IYIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 135
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDV 990
+ N+L ++DFGL RL + + +PEA G T +SDV
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAINYGTFTIKSDV 193
Query: 991 YSFGIVLLELLTGKR 1005
+SFGI+L E++T R
Sbjct: 194 WSFGILLTEIVTHGR 208
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 7/195 (3%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870
L ++G V+ YN ++++ L GS+ + F EA + +++H+ L L
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 81
Query: 871 PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDI 930
P ++ +YM NG+L L+ S G L +A +A G+AF+ N +H D+
Sbjct: 82 P--IYIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 136
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDV 990
+ N+L ++DFGL RL + + +PEA G T +SDV
Sbjct: 137 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAINYGTFTIKSDV 194
Query: 991 YSFGIVLLELLTGKR 1005
+SFGI+L E++T R
Sbjct: 195 WSFGILLTEIVTHGR 209
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 7/195 (3%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870
L ++G V+ YN ++++ L GS+ + F EA + +++H+ L L
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 82
Query: 871 PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDI 930
P ++ +YM NG+L L+ S G L +A +A G+AF+ N +H D+
Sbjct: 83 P--IYIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 137
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDV 990
+ N+L ++DFGL RL + + +PEA G T +SDV
Sbjct: 138 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAINYGTFTIKSDV 195
Query: 991 YSFGIVLLELLTGKR 1005
+SFGI+L E++T R
Sbjct: 196 WSFGILLTEIVTHGR 210
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F EA +G+ H N+ L G + + ++V +YM NG+L + L++ H +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPV-MIVTEYMENGSLDSFLRK------HDAQFT 145
Query: 905 MRHLIAL--GVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ L+ + G+A G+ +L VH D+ +N+L +++ +SDFGL R+
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAY 205
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
+ + SPEA + T SDV+S+GIVL E+++ G+RP ++D++K V +
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 82.0 bits (201), Expect = 2e-15, Method: Composition-based stats.
Identities = 62/231 (26%), Positives = 113/231 (48%), Gaps = 23/231 (9%)
Query: 811 LSRTRYGLVFKA-CYN-----DGMVLSIRRLPDGSLDENL-FRKEAEFLGKVRHRNLTVL 863
L +G VF A CYN D M+++++ L D +L F++EAE L ++H ++
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 864 RGYYAGAPDLRLLVYDYMPNGNLGTLLQ------------EASHQDGHVLNWPMRHLIAL 911
G G D ++V++YM +G+L L+ + G + M H IA
Sbjct: 83 YGV-CGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH-IAS 140
Query: 912 GVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTL 971
+A G+ +L + + VH D+ +N L A+ + DFG+ R + +
Sbjct: 141 QIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML-PI 199
Query: 972 GYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
++ PE+ + + T ESDV+SFG++L E+ T GK+P + ++++ + +
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ 250
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 82.0 bits (201), Expect = 2e-15, Method: Composition-based stats.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 7/195 (3%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870
L ++G V+ YN ++++ L GS+ + F EA + +++H+ L L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 86
Query: 871 PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDI 930
P ++ +YM NG+L L+ S G L +A +A G+AF+ N +H D+
Sbjct: 87 P--IYIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 141
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDV 990
+ N+L ++DFGL RL + + +PEA G T +SDV
Sbjct: 142 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF--PIKWTAPEAINYGTFTIKSDV 199
Query: 991 YSFGIVLLELLTGKR 1005
+SFGI+L E++T R
Sbjct: 200 WSFGILLTEIVTHGR 214
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 82.0 bits (201), Expect = 2e-15, Method: Composition-based stats.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 7/195 (3%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870
L ++G V+ YN ++++ L GS+ + F EA + +++H+ L L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 871 PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDI 930
P ++ +YM NG+L L+ S G L +A +A G+AF+ N +H D+
Sbjct: 81 P--IYIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 135
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDV 990
+ N+L ++DFGL RL + + +PEA G T +SDV
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF--PIKWTAPEAINYGTFTIKSDV 193
Query: 991 YSFGIVLLELLTGKR 1005
+SFGI+L E++T R
Sbjct: 194 WSFGILLTEIVTHGR 208
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 82.0 bits (201), Expect = 2e-15, Method: Composition-based stats.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 7/195 (3%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870
L ++G V+ YN ++++ L GS+ + F EA + +++H+ L L
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 75
Query: 871 PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDI 930
P ++ +YM NG+L L+ S G L +A +A G+AF+ N +H D+
Sbjct: 76 P--IYIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 130
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDV 990
+ N+L ++DFGL RL + + +PEA G T +SDV
Sbjct: 131 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF--PIKWTAPEAINYGTFTIKSDV 188
Query: 991 YSFGIVLLELLTGKR 1005
+SFGI+L E++T R
Sbjct: 189 WSFGILLTEIVTHGR 203
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 82.0 bits (201), Expect = 2e-15, Method: Composition-based stats.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 7/195 (3%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870
L ++G V+ YN ++++ L GS+ + F EA + +++H+ L L
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 85
Query: 871 PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDI 930
P ++ +YM NG+L L+ S G L +A +A G+AF+ N +H D+
Sbjct: 86 P--IYIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 140
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDV 990
+ N+L ++DFGL RL + + +PEA G T +SDV
Sbjct: 141 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF--PIKWTAPEAINYGTFTIKSDV 198
Query: 991 YSFGIVLLELLTGKR 1005
+SFGI+L E++T R
Sbjct: 199 WSFGILLTEIVTHGR 213
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 15/202 (7%)
Query: 808 ENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYY 867
E L ++G V+ A YN ++++ + GS+ F EA + ++H L L
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 252
Query: 868 AGAPDLRLLVYDYMPNGNLGTLLQ--EASHQDGHVLNWPMRHLIALG--VARGLAFLHTS 923
P ++ ++M G+L L+ E S Q P+ LI +A G+AF+
Sbjct: 253 TKEPIY--IITEFMAKGSLLDFLKSDEGSKQ-------PLPKLIDFSAQIAEGMAFIEQR 303
Query: 924 NMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGE 983
N +H D++ N+L A ++DFGL R+ + + +PEA G
Sbjct: 304 NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF--PIKWTAPEAINFGS 361
Query: 984 TTKESDVYSFGIVLLELLTGKR 1005
T +SDV+SFGI+L+E++T R
Sbjct: 362 FTIKSDVWSFGILLMEIVTYGR 383
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 124/261 (47%), Gaps = 27/261 (10%)
Query: 784 PKLVMFNNKITLAETVEATRQFDEE---------NVLSRTRYGLV----FKACYNDGMVL 830
P + +F + T + EA R+F +E V+ +G V K + +
Sbjct: 5 PGMKIFIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFV 64
Query: 831 SIRRLPDGSLDENL--FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGT 888
+I+ L G ++ F EA +G+ H N+ L G + + +++ ++M NG+L +
Sbjct: 65 AIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPV-MIITEFMENGSLDS 123
Query: 889 LLQEASHQDGHVLNWPMRHLIAL--GVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLS 946
L++ Q + + L+ + G+A G+ +L N VH D+ +N+L +++ +S
Sbjct: 124 FLRQNDGQ------FTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVS 177
Query: 947 DFGLDRLXXXXXXXXXXXXXXVGT--LGYVSPEAALTGETTKESDVYSFGIVLLELLT-G 1003
DFGL R G + + +PEA + T SDV+S+GIV+ E+++ G
Sbjct: 178 DFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG 237
Query: 1004 KRPVMFTQDEDIVKWVKKQLQ 1024
+RP ++D++ +++ +
Sbjct: 238 ERPYWDMTNQDVINAIEQDYR 258
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In
Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 82.0 bits (201), Expect = 2e-15, Method: Composition-based stats.
Identities = 74/283 (26%), Positives = 124/283 (43%), Gaps = 31/283 (10%)
Query: 817 GLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLL 876
G V+ YN ++++ L GS+ + F EA + +++H+ L L P +
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP--IYI 84
Query: 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVL 936
+ +YM NG+L L+ S G L +A +A G+AF+ N +H D++ N+L
Sbjct: 85 ITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 937 FDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIV 996
++DFGL RL + + +PEA G T +SDV+SFGI+
Sbjct: 142 VSDTLSCKIADFGLARLIEDAEXTAREGAKF--PIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 997 LLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITXXXXXXXXXXXXXXXXWEEFLLGVKV 1055
L E++T G+ P + +++ + L++G EE ++
Sbjct: 200 LTEIVTHGRIPYPGMTNPEVI----QNLERGYRMVRPDNCP----------EELY---QL 242
Query: 1056 ALLCTAPDPIDRPTMSDIVFMLEGCRVGPDIPSSADPTTQPSP 1098
LC P DRPT + +LE D ++ + QP P
Sbjct: 243 MRLCWKERPEDRPTFDYLRSVLE------DFFTATEGQYQPQP 279
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 25/202 (12%)
Query: 808 ENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYY 867
E L ++G V+ A YN ++++ + GS+ F EA + ++H L L
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 246
Query: 868 AGAPDLRLLVYDYMPNGNLGTLLQ--EASHQDGHVLNWPMRHLIALG--VARGLAFLHTS 923
P ++ ++M G+L L+ E S Q P+ LI +A G+AF+
Sbjct: 247 TKEPIY--IITEFMAKGSLLDFLKSDEGSKQ-------PLPKLIDFSAQIAEGMAFIEQR 297
Query: 924 NMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGE 983
N +H D++ N+L A ++DFGL R+ + + +PEA G
Sbjct: 298 NYIHRDLRAANILVSASLVCKIADFGLARVGAKF------------PIKWTAPEAINFGS 345
Query: 984 TTKESDVYSFGIVLLELLTGKR 1005
T +SDV+SFGI+L+E++T R
Sbjct: 346 FTIKSDVWSFGILLMEIVTYGR 367
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 80.9 bits (198), Expect = 4e-15, Method: Composition-based stats.
Identities = 52/178 (29%), Positives = 92/178 (51%), Gaps = 10/178 (5%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F EA +G+ H N+ L G + + +++ +YM NG L L+E +DG +
Sbjct: 93 FLGEAGIMGQFSHHNIIRLEGVISKYKPM-MIITEYMENGALDKFLRE---KDGE---FS 145
Query: 905 MRHLIAL--GVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ L+ + G+A G+ +L N VH D+ +N+L +++ +SDFGL R+
Sbjct: 146 VLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATY 205
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWV 1019
+ + +PEA + T SDV+SFGIV+ E++T G+RP + +++K +
Sbjct: 206 TTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI 263
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F EA +G+ H N+ L G + + ++V + M NG+L + L++ H +
Sbjct: 64 FLGEASIMGQFDHPNIIRLEGVVTKSKPV-MIVTEXMENGSLDSFLRK------HDAQFT 116
Query: 905 MRHLIAL--GVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ L+ + G+A G+ +L VH D+ +N+L +++ +SDFGL R+
Sbjct: 117 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 176
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
+ + SPEA + T SDV+S+GIVL E+++ G+RP ++D++K V +
Sbjct: 177 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 236
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 80.1 bits (196), Expect = 6e-15, Method: Composition-based stats.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 7/195 (3%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870
L ++G V+ YN ++++ L GS+ + F EA + +++H+ L L
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 76
Query: 871 PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDI 930
P ++ +YM NG+L L+ S G L +A +A G+AF+ N +H ++
Sbjct: 77 P--IYIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRNL 131
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDV 990
+ N+L ++DFGL RL + + +PEA G T +SDV
Sbjct: 132 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF--PIKWTAPEAINYGTFTIKSDV 189
Query: 991 YSFGIVLLELLTGKR 1005
+SFGI+L E++T R
Sbjct: 190 WSFGILLTEIVTHGR 204
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 79.7 bits (195), Expect = 8e-15, Method: Composition-based stats.
Identities = 51/180 (28%), Positives = 95/180 (52%), Gaps = 10/180 (5%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F EA +G+ H N+ L G + + ++V +YM NG+L T L++ DG +
Sbjct: 70 FLGEASIMGQFDHPNIIHLEGVVTKSKPV-MIVTEYMENGSLDTFLKK---NDGQ---FT 122
Query: 905 MRHLIAL--GVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ L+ + G++ G+ +L VH D+ +N+L +++ +SDFGL R+
Sbjct: 123 VIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 182
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
+ + +PEA + T SDV+S+GIV+ E+++ G+RP ++D++K V++
Sbjct: 183 TTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEE 242
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F EA +G+ H N+ L G + + ++V + M NG+L + L++ H +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPV-MIVTEXMENGSLDSFLRK------HDAQFT 145
Query: 905 MRHLIAL--GVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ L+ + G+A G+ +L VH D+ +N+L +++ +SDFGL R+
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
+ + SPEA + T SDV+S+GIVL E+++ G+RP ++D++K V +
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F EA +G+ H N+ L G + + ++V + M NG+L + L++ H +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPV-MIVTEXMENGSLDSFLRK------HDAQFT 145
Query: 905 MRHLIAL--GVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ L+ + G+A G+ +L VH D+ +N+L +++ +SDFGL R+
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
+ + SPEA + T SDV+S+GIVL E+++ G+RP ++D++K V +
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 27/214 (12%)
Query: 808 ENVLSRTRYGLVFKACY--NDGMVLSIRRLPDGSLDENL--FRKEAEFLGKVRHRNLTVL 863
E ++ +G V++A + ++ V + R PD + + + R+EA+ ++H N+ L
Sbjct: 12 EEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 864 RGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTS 923
RG P+L LV ++ G L +L ++NW A+ +ARG+ +LH
Sbjct: 72 RGVCLKEPNL-CLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDE 124
Query: 924 NMV---HGDIKPQNVLFDADFE--------AHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+V H D+K N+L E ++DFGL R G
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAAGAYA 179
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+++PE +K SDV+S+G++L ELLTG+ P
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 10/180 (5%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F EA +G+ H N+ L G L ++V +YM NG+L T L+ DG +
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRG-RLAMIVTEYMENGSLDTFLRT---HDGQ---FT 149
Query: 905 MRHLIAL--GVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ L+ + GV G+ +L VH D+ +NVL D++ +SDFGL R+
Sbjct: 150 IMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAY 209
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
+ + +PEA + SDV+SFG+V+ E+L G+RP + D++ V++
Sbjct: 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEE 269
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.0 bits (193), Expect = 1e-14, Method: Composition-based stats.
Identities = 55/180 (30%), Positives = 89/180 (49%), Gaps = 10/180 (5%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F EA +G+ H N+ L G L ++V +YM NG+L T L+ DG +
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRG-RLAMIVTEYMENGSLDTFLRT---HDGQ---FT 149
Query: 905 MRHLIAL--GVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ L+ + GV G+ +L VH D+ +NVL D++ +SDFGL R+
Sbjct: 150 IMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAX 209
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
+ + +PEA + SDV+SFG+V+ E+L G+RP + D++ V++
Sbjct: 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEE 269
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 61/251 (24%), Positives = 119/251 (47%), Gaps = 25/251 (9%)
Query: 789 FNNKITLAETVEATRQFDEE---------NVLSRTRYGLV----FKACYNDGMVLSIRRL 835
F + T + +A R+F +E V+ +G V K + ++I+ L
Sbjct: 6 FVDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTL 65
Query: 836 PDGSLDENL--FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEA 893
G D+ F EA +G+ H N+ L G + +++ +YM NG+L L++
Sbjct: 66 KAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPV-MIITEYMENGSLDAFLRK- 123
Query: 894 SHQDGHVLNWPMRHLIAL--GVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLD 951
DG + + L+ + G+ G+ +L + VH D+ +N+L +++ +SDFG+
Sbjct: 124 --NDGR---FTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMS 178
Query: 952 RLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFT 1010
R+ + + +PEA + T SDV+S+GIV+ E+++ G+RP
Sbjct: 179 RVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 238
Query: 1011 QDEDIVKWVKK 1021
++D++K +++
Sbjct: 239 SNQDVIKAIEE 249
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf
12058
Length = 285
Score = 77.8 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 828 MVLSIRRLPDGSLDENL--FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGN 885
+ ++I+ L G D+ F EA +G+ H N+ L G + +++ +YM NG+
Sbjct: 37 ICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPV-MIITEYMENGS 95
Query: 886 LGTLLQEASHQDGHVLNWPMRHLIAL--GVARGLAFLHTSNMVHGDIKPQNVLFDADFEA 943
L L++ DG + + L+ + G+ G+ +L + VH D+ +N+L +++
Sbjct: 96 LDAFLRK---NDGR---FTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVC 149
Query: 944 HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT- 1002
+SDFG+ R+ + + +PEA + T SDV+S+GIV+ E+++
Sbjct: 150 KVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSY 209
Query: 1003 GKRPVMFTQDEDIVKWVKK 1021
G+RP ++D++K +++
Sbjct: 210 GERPYWDMSNQDVIKAIEE 228
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 77.8 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 828 MVLSIRRLPDGSLDENL--FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGN 885
+ ++I+ L G D+ F EA +G+ H N+ L G + +++ +YM NG+
Sbjct: 43 ICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPV-MIITEYMENGS 101
Query: 886 LGTLLQEASHQDGHVLNWPMRHLIAL--GVARGLAFLHTSNMVHGDIKPQNVLFDADFEA 943
L L++ DG + + L+ + G+ G+ +L + VH D+ +N+L +++
Sbjct: 102 LDAFLRK---NDGR---FTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVC 155
Query: 944 HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT- 1002
+SDFG+ R+ + + +PEA + T SDV+S+GIV+ E+++
Sbjct: 156 KVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSY 215
Query: 1003 GKRPVMFTQDEDIVKWVKK 1021
G+RP ++D++K +++
Sbjct: 216 GERPYWDMSNQDVIKAIEE 234
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 110/215 (51%), Gaps = 24/215 (11%)
Query: 804 QFDEENV-----LSRTRYGLVFKACY-----NDGMVLSIRRLPDGSLDENL--FRKEAEF 851
QF+E ++ L + +G V Y N G V+++++L S +E+L F +E E
Sbjct: 4 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEI 62
Query: 852 LGKVRHRNLTVLRG--YYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHV--LNWPMRH 907
L ++H N+ +G Y AG +L+L++ +Y+P G+L LQ+ + H+ L + +
Sbjct: 63 LKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQ- 120
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ +G+ +L T +H D+ +N+L + + + DFGL ++
Sbjct: 121 -----ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 175
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +PE+ + + SDV+SFG+VL EL T
Sbjct: 176 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 110/215 (51%), Gaps = 24/215 (11%)
Query: 804 QFDEENV-----LSRTRYGLVFKACY-----NDGMVLSIRRLPDGSLDENL--FRKEAEF 851
QF+E ++ L + +G V Y N G V+++++L S +E+L F +E E
Sbjct: 11 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEI 69
Query: 852 LGKVRHRNLTVLRG--YYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHV--LNWPMRH 907
L ++H N+ +G Y AG +L+L++ +Y+P G+L LQ+ + H+ L + +
Sbjct: 70 LKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQ- 127
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ +G+ +L T +H D+ +N+L + + + DFGL ++
Sbjct: 128 -----ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 182
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +PE+ + + SDV+SFG+VL EL T
Sbjct: 183 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 110/215 (51%), Gaps = 24/215 (11%)
Query: 804 QFDEENV-----LSRTRYGLVFKACY-----NDGMVLSIRRLPDGSLDENL--FRKEAEF 851
QF+E ++ L + +G V Y N G V+++++L S +E+L F +E E
Sbjct: 13 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEI 71
Query: 852 LGKVRHRNLTVLRG--YYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHV--LNWPMRH 907
L ++H N+ +G Y AG +L+L++ +Y+P G+L LQ+ + H+ L + +
Sbjct: 72 LKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQ- 129
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ +G+ +L T +H D+ +N+L + + + DFGL ++
Sbjct: 130 -----ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 184
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +PE+ + + SDV+SFG+VL EL T
Sbjct: 185 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 110/215 (51%), Gaps = 24/215 (11%)
Query: 804 QFDEENV-----LSRTRYGLVFKACY-----NDGMVLSIRRLPDGSLDENL--FRKEAEF 851
QF+E ++ L + +G V Y N G V+++++L S +E+L F +E E
Sbjct: 12 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEI 70
Query: 852 LGKVRHRNLTVLRG--YYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHV--LNWPMRH 907
L ++H N+ +G Y AG +L+L++ +Y+P G+L LQ+ + H+ L + +
Sbjct: 71 LKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQ- 128
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ +G+ +L T +H D+ +N+L + + + DFGL ++
Sbjct: 129 -----ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 183
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +PE+ + + SDV+SFG+VL EL T
Sbjct: 184 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 110/215 (51%), Gaps = 24/215 (11%)
Query: 804 QFDEENV-----LSRTRYGLVFKACY-----NDGMVLSIRRLPDGSLDENL--FRKEAEF 851
QF+E ++ L + +G V Y N G V+++++L S +E+L F +E E
Sbjct: 10 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEI 68
Query: 852 LGKVRHRNLTVLRG--YYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHV--LNWPMRH 907
L ++H N+ +G Y AG +L+L++ +Y+P G+L LQ+ + H+ L + +
Sbjct: 69 LKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQ- 126
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ +G+ +L T +H D+ +N+L + + + DFGL ++
Sbjct: 127 -----ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 181
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +PE+ + + SDV+SFG+VL EL T
Sbjct: 182 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 110/215 (51%), Gaps = 24/215 (11%)
Query: 804 QFDEENV-----LSRTRYGLVFKACY-----NDGMVLSIRRLPDGSLDENL--FRKEAEF 851
QF+E ++ L + +G V Y N G V+++++L S +E+L F +E E
Sbjct: 9 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEI 67
Query: 852 LGKVRHRNLTVLRG--YYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHV--LNWPMRH 907
L ++H N+ +G Y AG +L+L++ +Y+P G+L LQ+ + H+ L + +
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQ- 125
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ +G+ +L T +H D+ +N+L + + + DFGL ++
Sbjct: 126 -----ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +PE+ + + SDV+SFG+VL EL T
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor
Length = 301
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 110/215 (51%), Gaps = 24/215 (11%)
Query: 804 QFDEENV-----LSRTRYGLVFKACY-----NDGMVLSIRRLPDGSLDENL--FRKEAEF 851
QF+E ++ L + +G V Y N G V+++++L S +E+L F +E E
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEI 64
Query: 852 LGKVRHRNLTVLRG--YYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHV--LNWPMRH 907
L ++H N+ +G Y AG +L+L++ +Y+P G+L LQ+ + H+ L + +
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQ- 122
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ +G+ +L T +H D+ +N+L + + + DFGL ++
Sbjct: 123 -----ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 177
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +PE+ + + SDV+SFG+VL EL T
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl
Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl
Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 110/215 (51%), Gaps = 24/215 (11%)
Query: 804 QFDEENV-----LSRTRYGLVFKACY-----NDGMVLSIRRLPDGSLDENL--FRKEAEF 851
QF+E ++ L + +G V Y N G V+++++L S +E+L F +E E
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEI 64
Query: 852 LGKVRHRNLTVLRG--YYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHV--LNWPMRH 907
L ++H N+ +G Y AG +L+L++ +Y+P G+L LQ+ + H+ L + +
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQ- 122
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ +G+ +L T +H D+ +N+L + + + DFGL ++
Sbjct: 123 -----ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 177
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +PE+ + + SDV+SFG+VL EL T
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 110/215 (51%), Gaps = 24/215 (11%)
Query: 804 QFDEENV-----LSRTRYGLVFKACY-----NDGMVLSIRRLPDGSLDENL--FRKEAEF 851
QF+E ++ L + +G V Y N G V+++++L S +E+L F +E E
Sbjct: 24 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEI 82
Query: 852 LGKVRHRNLTVLRG--YYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHV--LNWPMRH 907
L ++H N+ +G Y AG +L+L++ +Y+P G+L LQ+ + H+ L + +
Sbjct: 83 LKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQ- 140
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ +G+ +L T +H D+ +N+L + + + DFGL ++
Sbjct: 141 -----ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 195
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +PE+ + + SDV+SFG+VL EL T
Sbjct: 196 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 110/215 (51%), Gaps = 24/215 (11%)
Query: 804 QFDEENV-----LSRTRYGLVFKACY-----NDGMVLSIRRLPDGSLDENL--FRKEAEF 851
QF+E ++ L + +G V Y N G V+++++L S +E+L F +E E
Sbjct: 24 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEI 82
Query: 852 LGKVRHRNLTVLRG--YYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHV--LNWPMRH 907
L ++H N+ +G Y AG +L+L++ +Y+P G+L LQ+ + H+ L + +
Sbjct: 83 LKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQ- 140
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ +G+ +L T +H D+ +N+L + + + DFGL ++
Sbjct: 141 -----ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 195
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +PE+ + + SDV+SFG+VL EL T
Sbjct: 196 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 110/215 (51%), Gaps = 24/215 (11%)
Query: 804 QFDEENV-----LSRTRYGLVFKACY-----NDGMVLSIRRLPDGSLDENL--FRKEAEF 851
QF+E ++ L + +G V Y N G V+++++L S +E+L F +E E
Sbjct: 37 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEI 95
Query: 852 LGKVRHRNLTVLRG--YYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHV--LNWPMRH 907
L ++H N+ +G Y AG +L+L++ +Y+P G+L LQ+ + H+ L + +
Sbjct: 96 LKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQ- 153
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ +G+ +L T +H D+ +N+L + + + DFGL ++
Sbjct: 154 -----ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 208
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +PE+ + + SDV+SFG+VL EL T
Sbjct: 209 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 110/215 (51%), Gaps = 24/215 (11%)
Query: 804 QFDEENV-----LSRTRYGLVFKACY-----NDGMVLSIRRLPDGSLDENL--FRKEAEF 851
QF+E ++ L + +G V Y N G V+++++L S +E+L F +E E
Sbjct: 5 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEI 63
Query: 852 LGKVRHRNLTVLRG--YYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHV--LNWPMRH 907
L ++H N+ +G Y AG +L+L++ +Y+P G+L LQ+ + H+ L + +
Sbjct: 64 LKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQ- 121
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ +G+ +L T +H D+ +N+L + + + DFGL ++
Sbjct: 122 -----ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 176
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +PE+ + + SDV+SFG+VL EL T
Sbjct: 177 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 110/215 (51%), Gaps = 24/215 (11%)
Query: 804 QFDEENV-----LSRTRYGLVFKACY-----NDGMVLSIRRLPDGSLDENL--FRKEAEF 851
QF+E ++ L + +G V Y N G V+++++L S +E+L F +E E
Sbjct: 9 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEI 67
Query: 852 LGKVRHRNLTVLRG--YYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHV--LNWPMRH 907
L ++H N+ +G Y AG +L+L++ +Y+P G+L LQ + + H+ L + +
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQAHAERIDHIKLLQYTSQ- 125
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ +G+ +L T +H D+ +N+L + + + DFGL ++
Sbjct: 126 -----ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +PE+ + + SDV+SFG+VL EL T
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor
Nvp-Bbt594
Length = 295
Score = 77.0 bits (188), Expect = 5e-14, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 24/215 (11%)
Query: 804 QFDEENV-----LSRTRYGLVFKACY-----NDGMVLSIRRLPDGSLDENL--FRKEAEF 851
QF+E ++ L + +G V Y N G V+++++L S +E+L F +E E
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEI 64
Query: 852 LGKVRHRNLTVLRG--YYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHV--LNWPMRH 907
L ++H N+ +G Y AG +L+L++ +Y+P G+L LQ+ + H+ L + +
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQ- 122
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ +G+ +L T +H D+ +N+L + + + DFGL ++
Sbjct: 123 -----ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPG 177
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +PE+ + + SDV+SFG+VL EL T
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 24/215 (11%)
Query: 804 QFDEENV-----LSRTRYGLVFKACY-----NDGMVLSIRRLPDGSLDENL--FRKEAEF 851
QF+E ++ L + +G V Y N G V+++++L S +E+L F +E E
Sbjct: 9 QFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEI 67
Query: 852 LGKVRHRNLTVLRG--YYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHV--LNWPMRH 907
L ++H N+ +G Y AG +L+L++ +++P G+L LQ+ + H+ L + +
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIM-EFLPYGSLREYLQKHKERIDHIKLLQYTSQ- 125
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ +G+ +L T +H D+ +N+L + + + DFGL ++
Sbjct: 126 -----ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +PE+ + + SDV+SFG+VL EL T
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 75.5 bits (184), Expect = 2e-13, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 7/207 (3%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870
L ++G V+ YN+ ++++ L G++ F +EA + ++H L L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTRE 80
Query: 871 PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDI 930
+ ++ +YM G+L L+ S + G VL P + +A G+A++ N +H D+
Sbjct: 81 EPI-YIITEYMAKGSLLDFLK--SDEGGKVL-LPKLIDFSAQIAEGMAYIERKNYIHRDL 136
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDV 990
+ NVL ++DFGL R+ + + +PEA G T +SDV
Sbjct: 137 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKF--PIKWTAPEAINFGCFTIKSDV 194
Query: 991 YSFGIVLLELLT-GKRPVMFTQDEDIV 1016
+SFGI+L E++T GK P + D++
Sbjct: 195 WSFGILLYEIVTYGKIPYPGRTNADVM 221
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 57/215 (26%), Positives = 108/215 (50%), Gaps = 24/215 (11%)
Query: 804 QFDEENV-----LSRTRYGLVFKACY-----NDGMVLSIRRLPDGSLDENL--FRKEAEF 851
QF+E ++ L + +G V Y N G V+++++L S +E+L F +E E
Sbjct: 7 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEI 65
Query: 852 LGKVRHRNLTVLRG--YYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHV--LNWPMRH 907
L ++H N+ +G Y AG +L+L++ +Y+P G+L LQ+ + H+ L + +
Sbjct: 66 LKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQ- 123
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ +G+ +L T +H ++ +N+L + + + DFGL ++
Sbjct: 124 -----ICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPG 178
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +PE+ + + SDV+SFG+VL EL T
Sbjct: 179 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 63/230 (27%), Positives = 112/230 (48%), Gaps = 24/230 (10%)
Query: 811 LSRTRYGLVFKA-CYN-----DGMVLSIRRLPDGSLDENL-FRKEAEFLGKVRHRNLTVL 863
L +G VF A CYN D ++++++ L D S + F +EAE L ++H ++
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 864 RGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVL----NWP-------MRHLIALG 912
G L ++V++YM +G+L L+ +H VL N P M H IA
Sbjct: 81 YGVCVEGDPL-IMVFEYMKHGDLNKFLR--AHGPDAVLMAEGNPPTELTQSQMLH-IAQQ 136
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+A G+ +L + + VH D+ +N L + + DFG+ R + +
Sbjct: 137 IAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTML-PIR 195
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
++ PE+ + + T ESDV+S G+VL E+ T GK+P + ++++ + +
Sbjct: 196 WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ 245
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 104/204 (50%), Gaps = 14/204 (6%)
Query: 828 MVLSIRRLPDGSLDENL--FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGN 885
+ ++I+ L G ++ F EA +G+ H N+ L G + + +++ ++M NG+
Sbjct: 36 IFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPV-MIITEFMENGS 94
Query: 886 LGTLLQEASHQDGHVLNWPMRHLIAL--GVARGLAFLHTSNMVHGDIKPQNVLFDADFEA 943
L + L++ DG + + L+ + G+A G+ +L N VH + +N+L +++
Sbjct: 95 LDSFLRQ---NDGQ---FTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVC 148
Query: 944 HLSDFGLDRLXXXXXXXXXXXXXXVGT--LGYVSPEAALTGETTKESDVYSFGIVLLELL 1001
+SDFGL R G + + +PEA + T SDV+S+GIV+ E++
Sbjct: 149 KVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 208
Query: 1002 T-GKRPVMFTQDEDIVKWVKKQLQ 1024
+ G+RP ++D++ +++ +
Sbjct: 209 SYGERPYWDMTNQDVINAIEQDYR 232
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 93/181 (51%), Gaps = 12/181 (6%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYA-GAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNW 903
F EA +G+ H N+ L G G P ++V ++M NG L L++ DG +
Sbjct: 91 FLCEASIMGQFDHPNVVHLEGVVTRGKP--VMIVIEFMENGALDAFLRK---HDGQ---F 142
Query: 904 PMRHLIAL--GVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXX 961
+ L+ + G+A G+ +L VH D+ +N+L +++ +SDFGL R+
Sbjct: 143 TVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAV 202
Query: 962 XXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVK 1020
+ + +PEA + T SDV+S+GIV+ E+++ G+RP ++D++K ++
Sbjct: 203 YTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE 262
Query: 1021 K 1021
+
Sbjct: 263 E 263
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic
Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A Pentacyclic
Inhibitor
Length = 268
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 21/231 (9%)
Query: 801 ATRQFDEENV-----LSRTRYGLVFKAC-YNDGMVLSIRRLPDGSLD----ENLFRKEAE 850
A RQ+ E+ L + ++G V+ A N +L+++ L L+ E+ R+E E
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 851 FLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIA 910
+RH N+ L GY+ + + L++ +Y P G + LQ+ S D + L
Sbjct: 61 IQSHLRHPNILRLYGYFHDSTRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-- 117
Query: 911 LGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGT 970
A L++ H+ ++H DIKP+N+L + E ++DFG GT
Sbjct: 118 ---ANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRAALCGT 169
Query: 971 LGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKK 1021
L Y+ PE ++ D++S G++ E L GK P +D K + +
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISR 220
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDE-NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR 874
+G V+K ++ + + I ++ D + ++ FR E L K RH N+ + GY D
Sbjct: 49 FGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT--KDNL 106
Query: 875 LLVYDYMPNGNLGTLL--QEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKP 932
+V + +L L QE Q +++ IA A+G+ +LH N++H D+K
Sbjct: 107 AIVTQWCEGSSLYKHLHVQETKFQMFQLID------IARQTAQGMDYLHAKNIIHRDMKS 160
Query: 933 QNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTK---ESD 989
N+ + DFGL + G++ +++PE + +SD
Sbjct: 161 NNIFLHEGLTVKIGDFGLATV-KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSD 219
Query: 990 VYSFGIVLLELLTGKRPVMFTQDED 1014
VYS+GIVL EL+TG+ P + D
Sbjct: 220 VYSYGIVLYELMTGELPYSHINNRD 244
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 16/211 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L++ +Y P G + LQ+ S D + L A
Sbjct: 71 RHPNILRLYGYFHDATRVYLIL-EYAPRGEVYKELQKLSKFDEQRTATYITEL-----AN 124
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E ++DFG GTL Y+
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTLDYLP 179
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
PE ++ D++S G++ E L GK P
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 73.6 bits (179), Expect = 6e-13, Method: Composition-based stats.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L++ +Y P G + LQ+ S D + L A
Sbjct: 71 RHPNILRLYGYFHDATRVYLIL-EYAPRGEVYKELQKLSKFDEQRTATYITEL-----AN 124
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E ++DFG GTL Y+
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRXXLXGTLDYLP 179
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
PE ++ D++S G++ E L GK P
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 73.6 bits (179), Expect = 6e-13, Method: Composition-based stats.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 16/211 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L++ +Y P G + LQ+ S D + L A
Sbjct: 71 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 124
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E ++DFG GTL Y+
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTLDYLP 179
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
PE ++ D++S G++ E L GK P
Sbjct: 180 PEXIEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 113/245 (46%), Gaps = 27/245 (11%)
Query: 800 EATRQFDEE---------NVLSRTRYGLV----FKACYNDGMVLSIRRLPDGSLDENL-- 844
EA R+F +E V+ +G V KA ++I+ L G +
Sbjct: 4 EAVREFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRRE 63
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F EA +G+ H N+ L G + + +L ++M NG L + L+ DG +
Sbjct: 64 FLSEASIMGQFEHPNIIRLEGVVTNSMPVMILT-EFMENGALDSFLR---LNDGQ---FT 116
Query: 905 MRHLIAL--GVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ L+ + G+A G+ +L + VH D+ +N+L +++ +SDFGL R
Sbjct: 117 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT 176
Query: 963 XXXXXVGT--LGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWV 1019
G + + +PEA + T SD +S+GIV+ E+++ G+RP ++D++ +
Sbjct: 177 ETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAI 236
Query: 1020 KKQLQ 1024
++ +
Sbjct: 237 EQDYR 241
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 72.8 bits (177), Expect = 9e-13, Method: Composition-based stats.
Identities = 54/177 (30%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAG-----APDLRLLVYDYMPNGNLGTLLQEASHQDGH 899
FR+EA+ + H + + Y G A L +V +Y+ G L++ H +G
Sbjct: 76 FRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYVD----GVTLRDIVHTEGP 129
Query: 900 VLNWPMRHLIALGVA-RGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXX 958
+ P R + + A + L F H + ++H D+KP N++ A + DFG+ R
Sbjct: 130 MT--PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 187
Query: 959 XXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+GT Y+SPE A SDVYS G VL E+LTG+ P FT D +
Sbjct: 188 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP--FTGDSPV 242
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 100/226 (44%), Gaps = 16/226 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L+ +Y P G + LQ+ S D + L A
Sbjct: 92 RHPNILRLYGYFHDATRV-YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 145
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E ++DFG GTL Y+
Sbjct: 146 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTLDYLP 200
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKK 1021
PE ++ D++S G++ E L GK P ++ K + +
Sbjct: 201 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 246
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea Inhibitor
Length = 267
Score = 72.8 bits (177), Expect = 1e-12, Method: Composition-based stats.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 16/211 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L++ +Y P G + LQ+ S D + L A
Sbjct: 65 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 118
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E ++DFG GTL Y+
Sbjct: 119 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTLDYLP 173
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
PE ++ D++S G++ E L GK P
Sbjct: 174 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.8 bits (177), Expect = 1e-12, Method: Composition-based stats.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 16/211 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L++ +Y P G + LQ+ S D + L A
Sbjct: 69 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 122
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E ++DFG GTL Y+
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTLDYLP 177
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
PE ++ D++S G++ E L GK P
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole Inhibitor
Length = 268
Score = 72.8 bits (177), Expect = 1e-12, Method: Composition-based stats.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 16/211 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L++ +Y P G + LQ+ S D + L A
Sbjct: 66 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 119
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E ++DFG GTL Y+
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRAALCGTLDYLP 174
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
PE ++ D++S G++ E L GK P
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 72.8 bits (177), Expect = 1e-12, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAG-----APDLRLLVYDYMPNGNLGTLLQEASHQDGH 899
FR+EA+ + H + + Y G A L +V +Y+ G L++ H +G
Sbjct: 59 FRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYVD----GVTLRDIVHTEGP 112
Query: 900 VLNWPMRHLIALGVA-RGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXX 958
+ P R + + A + L F H + ++H D+KP N+L A + DFG+ R
Sbjct: 113 MT--PKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSG 170
Query: 959 XXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+GT Y+SPE A SDVYS G VL E+LTG+ P FT D +
Sbjct: 171 NSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP--FTGDSPV 225
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 54/177 (30%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAG-----APDLRLLVYDYMPNGNLGTLLQEASHQDGH 899
FR+EA+ + H + + Y G A L +V +Y+ G L++ H +G
Sbjct: 59 FRREAQNAAALNHPAIVAV--YATGEAETPAGPLPYIVMEYVD----GVTLRDIVHTEGP 112
Query: 900 VLNWPMRHLIALGVA-RGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXX 958
+ P R + + A + L F H + ++H D+KP N++ A + DFG+ R
Sbjct: 113 MT--PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 959 XXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+GT Y+SPE A SDVYS G VL E+LTG+ P FT D +
Sbjct: 171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP--FTGDSPV 225
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 16/211 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L++ +Y P G + LQ+ S D + L A
Sbjct: 66 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 119
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E ++DFG GTL Y+
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTXLCGTLDYLP 174
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
PE ++ D++S G++ E L GK P
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 16/226 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L++ +Y P G + LQ+ S D + L A
Sbjct: 69 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 122
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E ++DFG GTL Y+
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRAALCGTLDYLP 177
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKK 1021
PE ++ D++S G++ E L GK P ++ K + +
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L++ +Y P G + LQ+ S D + L A
Sbjct: 66 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 119
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E ++DFG GTL Y+
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRXXLCGTLDYLP 174
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
PE ++ D++S G++ E L GK P
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L++ +Y P G + LQ+ S D + L A
Sbjct: 69 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 122
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E ++DFG GTL Y+
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRXXLCGTLDYLP 177
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
PE ++ D++S G++ E L GK P
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 7/207 (3%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870
L ++G V+ YN+ ++++ L G++ F +EA + ++H L L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE 79
Query: 871 PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDI 930
+ ++ ++M G+L L+ S + G VL P + +A G+A++ N +H D+
Sbjct: 80 EPI-YIITEFMAKGSLLDFLK--SDEGGKVL-LPKLIDFSAQIAEGMAYIERKNYIHRDL 135
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDV 990
+ NVL ++DFGL R+ + + +PEA G T +S+V
Sbjct: 136 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKF--PIKWTAPEAINFGCFTIKSNV 193
Query: 991 YSFGIVLLELLT-GKRPVMFTQDEDIV 1016
+SFGI+L E++T GK P + D++
Sbjct: 194 WSFGILLYEIVTYGKIPYPGRTNADVM 220
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 16/211 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L++ +Y P G + LQ+ S D + L A
Sbjct: 63 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 116
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E ++DFG GTL Y+
Sbjct: 117 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTLDYLP 171
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
PE ++ D++S G++ E L GK P
Sbjct: 172 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 54/177 (30%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAG-----APDLRLLVYDYMPNGNLGTLLQEASHQDGH 899
FR+EA+ + H + + Y G A L +V +Y+ G L++ H +G
Sbjct: 59 FRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYVD----GVTLRDIVHTEGP 112
Query: 900 VLNWPMRHLIALGVA-RGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXX 958
+ P R + + A + L F H + ++H D+KP N++ A + DFG+ R
Sbjct: 113 MT--PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 959 XXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+GT Y+SPE A SDVYS G VL E+LTG+ P FT D +
Sbjct: 171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP--FTGDSPV 225
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 16/226 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L++ +Y P G + LQ+ S D + L A
Sbjct: 66 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 119
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E ++DFG GTL Y+
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTLDYLP 174
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKK 1021
PE ++ D++S G++ E L GK P ++ K + +
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 811 LSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKVRHRNLTVLRG 865
L + ++G V+ A +L+++ L L+ E+ R+E E +RH N+ L G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 866 YYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNM 925
Y+ A + L++ +Y P G + LQ+ S D + L A L++ H+ +
Sbjct: 93 YFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----ANALSYCHSKRV 146
Query: 926 VHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETT 985
+H DIKP+N+L + E ++DFG GTL Y+ PE
Sbjct: 147 IHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTLDYLPPEMIEGRMHD 201
Query: 986 KESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKK 1021
++ D++S G++ E L GK P ++ K + +
Sbjct: 202 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 237
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/189 (24%), Positives = 96/189 (50%), Gaps = 7/189 (3%)
Query: 815 RYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+YG V++ + + ++++ L + +++ F KEA + +++H NL L G P
Sbjct: 26 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 85
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
+++ ++M GNL L+E + Q+ +N + +A ++ + +L N +H D+ +
Sbjct: 86 YIII-EFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 141
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N L + ++DFGL RL + + +PE+ + + +SDV++F
Sbjct: 142 NCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAF 199
Query: 994 GIVLLELLT 1002
G++L E+ T
Sbjct: 200 GVLLWEIAT 208
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium
Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium
Tuberculosis Pknb
Length = 311
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 54/177 (30%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAG-----APDLRLLVYDYMPNGNLGTLLQEASHQDGH 899
FR+EA+ + H + + Y G A L +V +Y+ G L++ H +G
Sbjct: 59 FRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYVD----GVTLRDIVHTEGP 112
Query: 900 VLNWPMRHLIALGVA-RGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXX 958
+ P R + + A + L F H + ++H D+KP N++ A + DFG+ R
Sbjct: 113 MT--PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 959 XXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+GT Y+SPE A SDVYS G VL E+LTG+ P FT D +
Sbjct: 171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP--FTGDSPV 225
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 16/226 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L++ +Y P G + LQ+ S D + L A
Sbjct: 71 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 124
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E ++DFG GTL Y+
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTLDYLP 179
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKK 1021
PE ++ D++S G++ E L GK P ++ K + +
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/189 (23%), Positives = 95/189 (50%), Gaps = 7/189 (3%)
Query: 815 RYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+YG V++ + + ++++ L + +++ F KEA + +++H NL L G P
Sbjct: 30 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 89
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
+++ ++M GNL L+E + Q+ +N + +A ++ + +L N +H D+ +
Sbjct: 90 YIII-EFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N L + ++DFGL RL + + +PE+ + + +SDV++F
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAF 203
Query: 994 GIVLLELLT 1002
G++L E+ T
Sbjct: 204 GVLLWEIAT 212
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 16/211 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L++ +Y P G + LQ+ S D + L A
Sbjct: 69 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 122
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E ++DFG GTL Y+
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTLDYLP 177
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
PE ++ D++S G++ E L GK P
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 16/226 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L++ +Y P G + LQ+ S D + L A
Sbjct: 92 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 145
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E ++DFG GTL Y+
Sbjct: 146 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRDDLCGTLDYLP 200
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKK 1021
PE ++ D++S G++ E L GK P ++ K + +
Sbjct: 201 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 246
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 16/226 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L++ +Y P G + LQ+ S D + L A
Sbjct: 66 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 119
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E ++DFG GTL Y+
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTELCGTLDYLP 174
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKK 1021
PE ++ D++S G++ E L GK P ++ K + +
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 107/228 (46%), Gaps = 18/228 (7%)
Query: 808 ENVLSRTRYGLV----FKACYNDGMVLSIRRLPDGSLDENL--FRKEAEFLGKVRHRNLT 861
E V+ +G V KA ++I+ L G + F EA +G+ H N+
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 862 VLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIAL--GVARGLAF 919
L G + + +L ++M NG L + L+ DG + + L+ + G+A G+ +
Sbjct: 79 RLEGVVTNSMPVMILT-EFMENGALDSFLR---LNDGQ---FTVIQLVGMLRGIASGMRY 131
Query: 920 LHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGT--LGYVSPE 977
L + VH D+ +N+L +++ +SDFGL R G + + +PE
Sbjct: 132 LAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE 191
Query: 978 AALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQ 1024
A + T SD +S+GIV+ E+++ G+RP ++D++ +++ +
Sbjct: 192 AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYR 239
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP
DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAG-----APDLRLLVYDYMPNGNLGTLLQEASHQDGH 899
FR+EA+ + H + + Y G A L +V +Y+ G L++ H +G
Sbjct: 59 FRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYVD----GVTLRDIVHTEGP 112
Query: 900 VLNWPMRHLIALGVA-RGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXX 958
+ P R + + A + L F H + ++H D+KP N++ A + DFG+ R
Sbjct: 113 MT--PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 959 XXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQD 1012
+GT Y+SPE A SDVYS G VL E+LTG+ P FT D
Sbjct: 171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP--FTGD 222
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With [7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 805 FDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKVRHRN 859
FD L + ++G V+ A +L+++ L L+ E+ R+E E +RH N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 860 LTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAF 919
+ L GY+ A + L++ +Y P G + LQ+ S D + L A L++
Sbjct: 74 ILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSRFDEQRTATYITEL-----ANALSY 127
Query: 920 LHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAA 979
H+ ++H DIKP+N+L ++ E ++DFG GTL Y+ PE
Sbjct: 128 CHSKRVIHRDIKPENLLLGSNGELKIADFGWS-----VHAPSSRRTTLCGTLDYLPPEMI 182
Query: 980 LTGETTKESDVYSFGIVLLELLTGKRP 1006
++ D++S G++ E L G P
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Pyrrolotriazine Based Inhibitor
Length = 373
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 804 QFDEENVLSRTRYGLVFKACY--NDG-----MVLSIRRLPD-GSLDENLFRKEAEFLGKV 855
F+E V+ R +G V+ NDG V S+ R+ D G + + F E +
Sbjct: 92 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 147
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALG--V 913
H N+ L G + L+V YM +G+L ++ +H N ++ LI G V
Sbjct: 148 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 201
Query: 914 ARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR-LXXXXXXXXXXXXXXVGTLG 972
A+G+ FL + VH D+ +N + D F ++DFGL R + +
Sbjct: 202 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 261
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+++ E+ T + T +SDV+SFG++L EL+T P
Sbjct: 262 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 16/211 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L++ +Y P G + LQ+ S D + L A
Sbjct: 66 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 119
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E ++DFG GTL Y+
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTDLCGTLDYLP 174
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
PE ++ D++S G++ E L GK P
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 16/211 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L++ +Y P G + LQ+ S D + L A
Sbjct: 67 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 120
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E ++DFG GTL Y+
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRDTLCGTLDYLP 175
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
PE ++ D++S G++ E L GK P
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis Of
A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 16/211 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L++ +Y P G + LQ+ S D + L A
Sbjct: 67 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 120
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E ++DFG GTL Y+
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTDLCGTLDYLP 175
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
PE ++ D++S G++ E L GK P
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By A
Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine Aurora
Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 16/226 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L++ +Y P G + LQ+ S D + L A
Sbjct: 70 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 123
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E ++DFG GTL Y+
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTLDYLP 178
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKK 1021
PE ++ D++S G++ E L GK P ++ K + +
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 224
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 16/226 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L++ +Y P G + LQ+ S D + L A
Sbjct: 71 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 124
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E ++DFG GTL Y+
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTDLCGTLDYLP 179
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKK 1021
PE ++ D++S G++ E L GK P ++ K + +
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L++ +Y P G + LQ+ S D + L A
Sbjct: 68 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 121
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E ++DFG GTL Y+
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRXXLCGTLDYLP 176
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
PE ++ D++S G++ E L GK P
Sbjct: 177 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 16/211 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L++ +Y P G + LQ+ S D + L A
Sbjct: 66 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 119
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E ++DFG GTL Y+
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTDLCGTLDYLP 174
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
PE ++ D++S G++ E L GK P
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepat
Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 804 QFDEENVLSRTRYGLVFKACY--NDG-----MVLSIRRLPD-GSLDENLFRKEAEFLGKV 855
F+E V+ R +G V+ NDG V S+ R+ D G + + F E +
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 88
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALG--V 913
H N+ L G + L+V YM +G+L ++ +H N ++ LI G V
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 142
Query: 914 ARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR-LXXXXXXXXXXXXXXVGTLG 972
A+G+ FL + VH D+ +N + D F ++DFGL R + +
Sbjct: 143 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+++ E+ T + T +SDV+SFG++L EL+T P
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 804 QFDEENVLSRTRYGLVFKACY--NDG-----MVLSIRRLPD-GSLDENLFRKEAEFLGKV 855
F+E V+ R +G V+ NDG V S+ R+ D G + + F E +
Sbjct: 34 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 89
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALG--V 913
H N+ L G + L+V YM +G+L ++ +H N ++ LI G V
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 143
Query: 914 ARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR-LXXXXXXXXXXXXXXVGTLG 972
A+G+ FL + VH D+ +N + D F ++DFGL R + +
Sbjct: 144 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVK 203
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+++ E+ T + T +SDV+SFG++L EL+T P
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 804 QFDEENVLSRTRYGLVFKACY--NDG-----MVLSIRRLPD-GSLDENLFRKEAEFLGKV 855
F+E V+ R +G V+ NDG V S+ R+ D G + + F E +
Sbjct: 34 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 89
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALG--V 913
H N+ L G + L+V YM +G+L ++ +H N ++ LI G V
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 143
Query: 914 ARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR-LXXXXXXXXXXXXXXVGTLG 972
A+G+ FL + VH D+ +N + D F ++DFGL R + +
Sbjct: 144 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 203
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+++ E+ T + T +SDV+SFG++L EL+T P
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With
A Staurosporine Analogue
Length = 290
Score = 70.9 bits (172), Expect = 3e-12, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 93/181 (51%), Gaps = 8/181 (4%)
Query: 825 NDGMVLSIRRLPDGSLDENL-FRKEAEFLGKVRHRNLTVLRG--YYAGAPDLRLLVYDYM 881
N G ++++++L D+ F++E + L + + RG Y G P+LRL V +Y+
Sbjct: 34 NTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRL-VMEYL 92
Query: 882 PNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADF 941
P+G L LQ + L+ L + + +G+ +L + VH D+ +N+L +++
Sbjct: 93 PSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEA 148
Query: 942 EAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELL 1001
++DFGL +L + + +PE+ +++SDV+SFG+VL EL
Sbjct: 149 HVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 208
Query: 1002 T 1002
T
Sbjct: 209 T 209
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 70.9 bits (172), Expect = 3e-12, Method: Composition-based stats.
Identities = 46/189 (24%), Positives = 95/189 (50%), Gaps = 7/189 (3%)
Query: 815 RYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+YG V++ + + ++++ L + +++ F KEA + +++H NL L G P
Sbjct: 30 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 89
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
++ ++M GNL L+E + Q+ +N + +A ++ + +L N +H D+ +
Sbjct: 90 -YIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N L + ++DFGL RL + + +PE+ + + +SDV++F
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAF 203
Query: 994 GIVLLELLT 1002
G++L E+ T
Sbjct: 204 GVLLWEIAT 212
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 804 QFDEENVLSRTRYGLVFKACY--NDG-----MVLSIRRLPD-GSLDENLFRKEAEFLGKV 855
F+E V+ R +G V+ NDG V S+ R+ D G + + F E +
Sbjct: 31 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 86
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALG--V 913
H N+ L G + L+V YM +G+L ++ +H N ++ LI G V
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 140
Query: 914 ARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR-LXXXXXXXXXXXXXXVGTLG 972
A+G+ FL + VH D+ +N + D F ++DFGL R + +
Sbjct: 141 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 200
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+++ E+ T + T +SDV+SFG++L EL+T P
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 804 QFDEENVLSRTRYGLVFKACY--NDG-----MVLSIRRLPD-GSLDENLFRKEAEFLGKV 855
F+E V+ R +G V+ NDG V S+ R+ D G + + F E +
Sbjct: 38 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 93
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALG--V 913
H N+ L G + L+V YM +G+L ++ +H N ++ LI G V
Sbjct: 94 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 147
Query: 914 ARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR-LXXXXXXXXXXXXXXVGTLG 972
A+G+ FL + VH D+ +N + D F ++DFGL R + +
Sbjct: 148 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 207
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+++ E+ T + T +SDV+SFG++L EL+T P
Sbjct: 208 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dp- 987
Length = 277
Score = 70.9 bits (172), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/189 (23%), Positives = 94/189 (49%), Gaps = 7/189 (3%)
Query: 815 RYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+YG V++ + + ++++ L + +++ F KEA + +++H NL L G P
Sbjct: 30 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 89
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
++ ++M GNL L+E + Q+ +N + +A ++ + +L N +H D+ +
Sbjct: 90 -YIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N L + ++DFGL RL + + +PE+ + + +SDV++F
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAF 203
Query: 994 GIVLLELLT 1002
G++L E+ T
Sbjct: 204 GVLLWEIAT 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 70.9 bits (172), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/189 (23%), Positives = 94/189 (49%), Gaps = 7/189 (3%)
Query: 815 RYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+YG V++ + + ++++ L + +++ F KEA + +++H NL L G P
Sbjct: 38 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 97
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
++ ++M GNL L+E + Q+ +N + +A ++ + +L N +H D+ +
Sbjct: 98 -YIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 153
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N L + ++DFGL RL + + +PE+ + + +SDV++F
Sbjct: 154 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAF 211
Query: 994 GIVLLELLT 1002
G++L E+ T
Sbjct: 212 GVLLWEIAT 220
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Inno-406
Length = 293
Score = 70.9 bits (172), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/189 (23%), Positives = 94/189 (49%), Gaps = 7/189 (3%)
Query: 815 RYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+YG V++ + + ++++ L + +++ F KEA + +++H NL L G P
Sbjct: 30 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 89
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
++ ++M GNL L+E + Q+ +N + +A ++ + +L N +H D+ +
Sbjct: 90 -YIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N L + ++DFGL RL + + +PE+ + + +SDV++F
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAF 203
Query: 994 GIVLLELLT 1002
G++L E+ T
Sbjct: 204 GVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 70.9 bits (172), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/189 (23%), Positives = 94/189 (49%), Gaps = 7/189 (3%)
Query: 815 RYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+YG V++ + + ++++ L + +++ F KEA + +++H NL L G P
Sbjct: 25 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 84
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
++ ++M GNL L+E + Q+ +N + +A ++ + +L N +H D+ +
Sbjct: 85 -YIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N L + ++DFGL RL + + +PE+ + + +SDV++F
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAF 198
Query: 994 GIVLLELLT 1002
G++L E+ T
Sbjct: 199 GVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 70.9 bits (172), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/189 (23%), Positives = 94/189 (49%), Gaps = 7/189 (3%)
Query: 815 RYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+YG V++ + + ++++ L + +++ F KEA + +++H NL L G P
Sbjct: 29 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 88
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
++ ++M GNL L+E + Q+ +N + +A ++ + +L N +H D+ +
Sbjct: 89 -YIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 144
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N L + ++DFGL RL + + +PE+ + + +SDV++F
Sbjct: 145 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAF 202
Query: 994 GIVLLELLT 1002
G++L E+ T
Sbjct: 203 GVLLWEIAT 211
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 70.9 bits (172), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/189 (23%), Positives = 94/189 (49%), Gaps = 7/189 (3%)
Query: 815 RYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+YG V++ + + ++++ L + +++ F KEA + +++H NL L G P
Sbjct: 25 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 84
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
++ ++M GNL L+E + Q+ +N + +A ++ + +L N +H D+ +
Sbjct: 85 -YIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N L + ++DFGL RL + + +PE+ + + +SDV++F
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAF 198
Query: 994 GIVLLELLT 1002
G++L E+ T
Sbjct: 199 GVLLWEIAT 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 70.9 bits (172), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/189 (23%), Positives = 94/189 (49%), Gaps = 7/189 (3%)
Query: 815 RYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+YG V++ + + ++++ L + +++ F KEA + +++H NL L G P
Sbjct: 27 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 86
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
++ ++M GNL L+E + Q+ +N + +A ++ + +L N +H D+ +
Sbjct: 87 -YIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 142
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N L + ++DFGL RL + + +PE+ + + +SDV++F
Sbjct: 143 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAF 200
Query: 994 GIVLLELLT 1002
G++L E+ T
Sbjct: 201 GVLLWEIAT 209
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 70.9 bits (172), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/189 (23%), Positives = 94/189 (49%), Gaps = 7/189 (3%)
Query: 815 RYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+YG V++ + + ++++ L + +++ F KEA + +++H NL L G P
Sbjct: 27 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 86
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
++ ++M GNL L+E + Q+ +N + +A ++ + +L N +H D+ +
Sbjct: 87 -YIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 142
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N L + ++DFGL RL + + +PE+ + + +SDV++F
Sbjct: 143 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAF 200
Query: 994 GIVLLELLT 1002
G++L E+ T
Sbjct: 201 GVLLWEIAT 209
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl
Mutant In Complex With The Aurora Kinase Inhibitor Vx-680
Length = 287
Score = 70.9 bits (172), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/189 (23%), Positives = 94/189 (49%), Gaps = 7/189 (3%)
Query: 815 RYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+YG V++ + + ++++ L + +++ F KEA + +++H NL L G P
Sbjct: 26 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 85
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
++ ++M GNL L+E + Q+ +N + +A ++ + +L N +H D+ +
Sbjct: 86 -YIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 141
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N L + ++DFGL RL + + +PE+ + + +SDV++F
Sbjct: 142 NCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF--PIKWTAPESLAYNKFSIKSDVWAF 199
Query: 994 GIVLLELLT 1002
G++L E+ T
Sbjct: 200 GVLLWEIAT 208
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
Length = 287
Score = 70.9 bits (172), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/189 (23%), Positives = 94/189 (49%), Gaps = 7/189 (3%)
Query: 815 RYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+YG V++ + + ++++ L + +++ F KEA + +++H NL L G P
Sbjct: 27 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 86
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
++ ++M GNL L+E + Q+ +N + +A ++ + +L N +H D+ +
Sbjct: 87 -YIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 142
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N L + ++DFGL RL + + +PE+ + + +SDV++F
Sbjct: 143 NCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF--PIKWTAPESLAYNKFSIKSDVWAF 200
Query: 994 GIVLLELLT 1002
G++L E+ T
Sbjct: 201 GVLLWEIAT 209
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 804 QFDEENVLSRTRYGLVFKACY--NDG-----MVLSIRRLPD-GSLDENLFRKEAEFLGKV 855
F+E V+ R +G V+ NDG V S+ R+ D G + + F E +
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 88
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALG--V 913
H N+ L G + L+V YM +G+L ++ +H N ++ LI G V
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 142
Query: 914 ARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR-LXXXXXXXXXXXXXXVGTLG 972
A+G+ FL + VH D+ +N + D F ++DFGL R + +
Sbjct: 143 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+++ E+ T + T +SDV+SFG++L EL+T P
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic
Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic
Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 16/226 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L++ +Y P G + LQ+ S D + L A
Sbjct: 69 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 122
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E ++DFG GTL Y+
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRDDLCGTLDYLP 177
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKK 1021
PE ++ D++S G++ E L GK P ++ K + +
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 16/226 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L++ +Y P G + LQ+ S D + L A
Sbjct: 67 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 120
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E ++DFG GTL Y+
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----CHAPSSRRTTLSGTLDYLP 175
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKK 1021
PE ++ D++S G++ E L GK P ++ K + +
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 221
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase In
Complex With An Mk-2461 Analog
Length = 307
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 804 QFDEENVLSRTRYGLVFKACY--NDG-----MVLSIRRLPD-GSLDENLFRKEAEFLGKV 855
F+E V+ R +G V+ NDG V S+ R+ D G + + F E +
Sbjct: 32 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 87
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALG--V 913
H N+ L G + L+V YM +G+L ++ +H N ++ LI G V
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 141
Query: 914 ARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR-LXXXXXXXXXXXXXXVGTLG 972
A+G+ +L + VH D+ +N + D F ++DFGL R + +
Sbjct: 142 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVK 201
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+++ E+ T + T +SDV+SFG++L EL+T P
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 804 QFDEENVLSRTRYGLVFKACY--NDG-----MVLSIRRLPD-GSLDENLFRKEAEFLGKV 855
F+E V+ R +G V+ NDG V S+ R+ D G + + F E +
Sbjct: 52 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 107
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALG--V 913
H N+ L G + L+V YM +G+L ++ +H N ++ LI G V
Sbjct: 108 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 161
Query: 914 ARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR-LXXXXXXXXXXXXXXVGTLG 972
A+G+ +L + VH D+ +N + D F ++DFGL R + +
Sbjct: 162 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 221
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+++ E+ T + T +SDV+SFG++L EL+T P
Sbjct: 222 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase In
Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase In
Complex With Arq 197
Length = 318
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 804 QFDEENVLSRTRYGLVFKACY--NDG-----MVLSIRRLPD-GSLDENLFRKEAEFLGKV 855
F+E V+ R +G V+ NDG V S+ R+ D G + + F E +
Sbjct: 51 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 106
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALG--V 913
H N+ L G + L+V YM +G+L ++ +H N ++ LI G V
Sbjct: 107 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 160
Query: 914 ARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR-LXXXXXXXXXXXXXXVGTLG 972
A+G+ +L + VH D+ +N + D F ++DFGL R + +
Sbjct: 161 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 220
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+++ E+ T + T +SDV+SFG++L EL+T P
Sbjct: 221 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 804 QFDEENVLSRTRYGLVFKACY--NDG-----MVLSIRRLPD-GSLDENLFRKEAEFLGKV 855
F+E V+ R +G V+ NDG V S+ R+ D G + + F E +
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 88
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALG--V 913
H N+ L G + L+V YM +G+L ++ +H N ++ LI G V
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 142
Query: 914 ARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR-LXXXXXXXXXXXXXXVGTLG 972
A+G+ +L + VH D+ +N + D F ++DFGL R + +
Sbjct: 143 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+++ E+ T + T +SDV+SFG++L EL+T P
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 804 QFDEENVLSRTRYGLVFKACY--NDG-----MVLSIRRLPD-GSLDENLFRKEAEFLGKV 855
F+E V+ R +G V+ NDG V S+ R+ D G + + F E +
Sbjct: 25 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 80
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALG--V 913
H N+ L G + L+V YM +G+L ++ +H N ++ LI G V
Sbjct: 81 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 134
Query: 914 ARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR-LXXXXXXXXXXXXXXVGTLG 972
A+G+ +L + VH D+ +N + D F ++DFGL R + +
Sbjct: 135 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 194
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+++ E+ T + T +SDV+SFG++L EL+T P
Sbjct: 195 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,6-Difluorophenyl)-1h-1,
2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 70.1 bits (170), Expect = 6e-12, Method: Composition-based stats.
Identities = 46/189 (24%), Positives = 92/189 (48%), Gaps = 7/189 (3%)
Query: 815 RYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+YG V+ + + ++++ L + +++ F KEA + +++H NL L G P
Sbjct: 44 QYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPF 103
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
+V +YMP GNL L+E + ++ + + +A ++ + +L N +H D+ +
Sbjct: 104 -YIVTEYMPYGNLLDYLRECNREE---VTAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 159
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N L + ++DFGL RL + + +PE+ + +SDV++F
Sbjct: 160 NCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNTFSIKSDVWAF 217
Query: 994 GIVLLELLT 1002
G++L E+ T
Sbjct: 218 GVLLWEIAT 226
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032
Length = 289
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 15/197 (7%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDE-NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR 874
+G V+K ++ + + + + + + F+ E L K RH N+ + GY + AP L
Sbjct: 37 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STAPQL- 94
Query: 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLI--ALGVARGLAFLHTSNMVHGDIKP 932
+V + +L H + M+ LI A ARG+ +LH +++H D+K
Sbjct: 95 AIVTQWCEGSSL------YHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKS 148
Query: 933 QNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGET---TKESD 989
N+ D + DFGL G++ +++PE ++ + +SD
Sbjct: 149 NNIFLHEDNTVKIGDFGL-ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 207
Query: 990 VYSFGIVLLELLTGKRP 1006
VY+FGIVL EL+TG+ P
Sbjct: 208 VYAFGIVLYELMTGQLP 224
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 94/189 (49%), Gaps = 7/189 (3%)
Query: 815 RYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+YG V++ + + ++++ L + +++ F KEA + +++H NL L G P
Sbjct: 271 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 330
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
++ ++M GNL L+E + Q+ +N + +A ++ + +L N +H ++ +
Sbjct: 331 YIIT-EFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRNLAAR 386
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N L + ++DFGL RL + + +PE+ + + +SDV++F
Sbjct: 387 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAF 444
Query: 994 GIVLLELLT 1002
G++L E+ T
Sbjct: 445 GVLLWEIAT 453
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 94/189 (49%), Gaps = 7/189 (3%)
Query: 815 RYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+YG V++ + + ++++ L + +++ F KEA + +++H NL L G P
Sbjct: 229 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 288
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
++ ++M GNL L+E + Q+ +N + +A ++ + +L N +H ++ +
Sbjct: 289 YIIT-EFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRNLAAR 344
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N L + ++DFGL RL + + +PE+ + + +SDV++F
Sbjct: 345 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAF 402
Query: 994 GIVLLELLT 1002
G++L E+ T
Sbjct: 403 GVLLWEIAT 411
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 16/226 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L++ +Y P G + LQ+ S D + L A
Sbjct: 68 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 121
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E +++FG GTL Y+
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS-----VHAPSSRRTTLCGTLDYLP 176
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKK 1021
PE ++ D++S G++ E L GK P ++ K + +
Sbjct: 177 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 222
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1
Length = 302
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 804 QFDEENVLSRTRYGLVFKACY--NDG-----MVLSIRRLPD-GSLDENLFRKEAEFLGKV 855
F+E V+ R +G V+ NDG V S+ R+ D G + + F E +
Sbjct: 31 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 86
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALG--V 913
H N+ L G + L+V YM +G+L ++ +H N ++ LI G V
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 140
Query: 914 ARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR-LXXXXXXXXXXXXXXVGTLG 972
A+G+ +L + VH D+ +N + D F ++DFGL R + +
Sbjct: 141 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 200
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+++ E+ T + T +SDV+SFG++L EL+T P
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 70.1 bits (170), Expect = 7e-12, Method: Composition-based stats.
Identities = 45/189 (23%), Positives = 95/189 (50%), Gaps = 7/189 (3%)
Query: 815 RYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+YG V++ + + ++++ L + +++ F KEA + +++H NL L G P
Sbjct: 23 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 82
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
+++ ++M GNL L+E + Q+ + + +A ++ + +L N +H D+ +
Sbjct: 83 YIII-EFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKKNFIHRDLAAR 138
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N L + ++DFGL RL + + +PE+ + + +SDV++F
Sbjct: 139 NCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAF 196
Query: 994 GIVLLELLT 1002
G++L E+ T
Sbjct: 197 GVLLWEIAT 205
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 70.1 bits (170), Expect = 7e-12, Method: Composition-based stats.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 811 LSRTRYGLVFKA-CYN-----DGMVLSIRRLPDGSLDENL-FRKEAEFLGKVRHRNLTVL 863
L +G VF A C+N D M+++++ L + S F++EAE L ++H+++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 864 RGYYAGAPDLRLLVYDYMPNGNLGTLLQE--------ASHQDGHVLNWPMRHLIALG--V 913
G L L+V++YM +G+L L+ A +D + L+A+ V
Sbjct: 86 FGVCTEGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 914 ARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGY 973
A G+ +L + VH D+ +N L + DFG+ R + + +
Sbjct: 145 AAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML-PIRW 203
Query: 974 VSPEAALTGETTKESDVYSFGIVLLELLT-GKRP 1006
+ PE+ L + T ESDV+SFG+VL E+ T GK+P
Sbjct: 204 MPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 70.1 bits (170), Expect = 7e-12, Method: Composition-based stats.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 811 LSRTRYGLVFKA-CYN-----DGMVLSIRRLPDGSLDENL-FRKEAEFLGKVRHRNLTVL 863
L +G VF A C+N D M+++++ L + S F++EAE L ++H+++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 864 RGYYAGAPDLRLLVYDYMPNGNLGTLLQE--------ASHQDGHVLNWPMRHLIALG--V 913
G L L+V++YM +G+L L+ A +D + L+A+ V
Sbjct: 80 FGVCTEGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 914 ARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGY 973
A G+ +L + VH D+ +N L + DFG+ R + + +
Sbjct: 139 AAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML-PIRW 197
Query: 974 VSPEAALTGETTKESDVYSFGIVLLELLT-GKRP 1006
+ PE+ L + T ESDV+SFG+VL E+ T GK+P
Sbjct: 198 MPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 70.1 bits (170), Expect = 7e-12, Method: Composition-based stats.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 811 LSRTRYGLVFKA-CYN-----DGMVLSIRRLPDGSLDENL-FRKEAEFLGKVRHRNLTVL 863
L +G VF A C+N D M+++++ L + S F++EAE L ++H+++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 864 RGYYAGAPDLRLLVYDYMPNGNLGTLLQE--------ASHQDGHVLNWPMRHLIALG--V 913
G L L+V++YM +G+L L+ A +D + L+A+ V
Sbjct: 109 FGVCTEGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 914 ARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGY 973
A G+ +L + VH D+ +N L + DFG+ R + + +
Sbjct: 168 AAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML-PIRW 226
Query: 974 VSPEAALTGETTKESDVYSFGIVLLELLT-GKRP 1006
+ PE+ L + T ESDV+SFG+VL E+ T GK+P
Sbjct: 227 MPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of
C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain Of
C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With 4-(
3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With 4-(
(6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 804 QFDEENVLSRTRYGLVFKACY--NDG-----MVLSIRRLPD-GSLDENLFRKEAEFLGKV 855
F+E V+ R +G V+ NDG V S+ R+ D G + + F E +
Sbjct: 30 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 85
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALG--V 913
H N+ L G + L+V YM +G+L ++ +H N ++ LI G V
Sbjct: 86 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 139
Query: 914 ARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR-LXXXXXXXXXXXXXXVGTLG 972
A+G+ +L + VH D+ +N + D F ++DFGL R + +
Sbjct: 140 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 199
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+++ E+ T + T +SDV+SFG++L EL+T P
Sbjct: 200 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 804 QFDEENVLSRTRYGLVFKACY--NDG-----MVLSIRRLPD-GSLDENLFRKEAEFLGKV 855
F+E V+ R +G V+ NDG V S+ R+ D G + + F E +
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 88
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALG--V 913
H N+ L G + L+V YM +G+L ++ +H N ++ LI G V
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 142
Query: 914 ARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR-LXXXXXXXXXXXXXXVGTLG 972
A+G+ +L + VH D+ +N + D F ++DFGL R + +
Sbjct: 143 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+++ E+ T + T +SDV+SFG++L EL+T P
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 69.7 bits (169), Expect = 8e-12, Method: Composition-based stats.
Identities = 44/189 (23%), Positives = 94/189 (49%), Gaps = 7/189 (3%)
Query: 815 RYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+YG V++ + + ++++ L + +++ F KEA + +++H NL L G P
Sbjct: 25 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 84
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
+++ ++M GNL L+E + Q+ + + +A ++ + +L N +H D+ +
Sbjct: 85 YIII-EFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N L + ++DFGL RL + + +PE+ + + +SDV++F
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAF 198
Query: 994 GIVLLELLT 1002
G++L E+ T
Sbjct: 199 GVLLWEIAT 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid Leukemi
Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid Leukemi
Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 69.7 bits (169), Expect = 8e-12, Method: Composition-based stats.
Identities = 44/189 (23%), Positives = 94/189 (49%), Gaps = 7/189 (3%)
Query: 815 RYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+YG V++ + + ++++ L + +++ F KEA + +++H NL L G P
Sbjct: 25 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 84
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
+++ ++M GNL L+E + Q+ + + +A ++ + +L N +H D+ +
Sbjct: 85 YIII-EFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N L + ++DFGL RL + + +PE+ + + +SDV++F
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAF 198
Query: 994 GIVLLELLT 1002
G++L E+ T
Sbjct: 199 GVLLWEIAT 207
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 804 QFDEENVLSRTRYGLVFKACY--NDG-----MVLSIRRLPD-GSLDENLFRKEAEFLGKV 855
F+E V+ R +G V+ NDG V S+ R+ D G + + F E +
Sbjct: 28 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 83
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALG--V 913
H N+ L G + L+V YM +G+L ++ +H N ++ LI G V
Sbjct: 84 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 137
Query: 914 ARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR-LXXXXXXXXXXXXXXVGTLG 972
A+G+ +L + VH D+ +N + D F ++DFGL R + +
Sbjct: 138 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 197
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+++ E+ T + T +SDV+SFG++L EL+T P
Sbjct: 198 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor
13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 804 QFDEENVLSRTRYGLVFKACY--NDG-----MVLSIRRLPD-GSLDENLFRKEAEFLGKV 855
F+E V+ R +G V+ NDG V S+ R+ D G + + F E +
Sbjct: 32 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 87
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALG--V 913
H N+ L G + L+V YM +G+L ++ +H N ++ LI G V
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 141
Query: 914 ARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR-LXXXXXXXXXXXXXXVGTLG 972
A+G+ +L + VH D+ +N + D F ++DFGL R + +
Sbjct: 142 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 201
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+++ E+ T + T +SDV+SFG++L EL+T P
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 15/197 (7%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDE-NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR 874
+G V+K ++ + + + + + + F+ E L K RH N+ + GY + P L
Sbjct: 25 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQL- 82
Query: 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLI--ALGVARGLAFLHTSNMVHGDIKP 932
+V + +L H + M+ LI A ARG+ +LH +++H D+K
Sbjct: 83 AIVTQWCEGSSL------YHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKS 136
Query: 933 QNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGET---TKESD 989
N+ D + DFGL + G++ +++PE ++ + +SD
Sbjct: 137 NNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVIRMQDSNPYSFQSD 195
Query: 990 VYSFGIVLLELLTGKRP 1006
VY+FGIVL EL+TG+ P
Sbjct: 196 VYAFGIVLYELMTGQLP 212
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor
Length = 272
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 16/211 (7%)
Query: 801 ATRQFDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKV 855
A F+ L + ++G V+ A +L+++ L L+ E+ R+E E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH N+ L GY+ A + L++ +Y P G + LQ+ S D + L A
Sbjct: 69 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 122
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L++ H+ ++H DIKP+N+L + E +++FG GTL Y+
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS-----VHAPSSRRTTLCGTLDYLP 177
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
PE ++ D++S G++ E L GK P
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 93/189 (49%), Gaps = 7/189 (3%)
Query: 815 RYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+YG V++ + + ++++ L + +++ F KEA + +++H NL L G P
Sbjct: 232 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 291
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
++ ++M GNL L+E + Q+ + + +A ++ + +L N +H ++ +
Sbjct: 292 YIIT-EFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKKNFIHRNLAAR 347
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N L + ++DFGL RL + + +PE+ + + +SDV++F
Sbjct: 348 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAF 405
Query: 994 GIVLLELLT 1002
G++L E+ T
Sbjct: 406 GVLLWEIAT 414
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 805 FDEENVLSRTRYGLVFKACYNDG-MVLSIRRLPDGSLD----ENLFRKEAEFLGKVRHRN 859
FD L + ++G V+ A +L+++ L L+ E+ R+E E +RH N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 860 LTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAF 919
+ L GY+ A + L++ +Y P G + LQ+ S D + L A L++
Sbjct: 74 ILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSRFDEQRTATYITEL-----ANALSY 127
Query: 920 LHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAA 979
H+ ++H DIKP+N+L ++ E ++DFG GTL Y+ PE
Sbjct: 128 CHSKRVIHRDIKPENLLLGSNGELKIADFGWS-----VHAPSSRRDTLCGTLDYLPPEMI 182
Query: 980 LTGETTKESDVYSFGIVLLELLTGKRP 1006
++ D++S G++ E L G P
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 68.9 bits (167), Expect = 2e-11, Method: Composition-based stats.
Identities = 67/259 (25%), Positives = 121/259 (46%), Gaps = 28/259 (10%)
Query: 786 LVMFNNKITLAETVEATRQFDEENVLSRTRYGLVFK------ACYNDGMVLSIRRLPD-- 837
L+ + + L E + +F EE L R+G V+K A ++I+ L D
Sbjct: 11 LINQHKQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA 68
Query: 838 -GSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGT-LLQEASH 895
G L E FR EA +++H N+ L G L + ++ Y +G+L L+ + H
Sbjct: 69 EGPLREE-FRHEAMLRARLQHPNVVCLLGVVTKDQPLSM-IFSYCSHGDLHEFLVMRSPH 126
Query: 896 QD----------GHVLNWP-MRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAH 944
D L P HL+A +A G+ +L + ++VH D+ +NVL
Sbjct: 127 SDVGSTDDDRTVKSALEPPDFVHLVA-QIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVK 185
Query: 945 LSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-G 1003
+SD GL R + + +++PEA + G+ + +SD++S+G+VL E+ + G
Sbjct: 186 ISDLGLFREVYAADYYKLLGNSLL-PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYG 244
Query: 1004 KRPVMFTQDEDIVKWVKKQ 1022
+P ++D+V+ ++ +
Sbjct: 245 LQPYCGYSNQDVVEMIRNR 263
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out
Inhibitor Ap24534
Length = 284
Score = 68.9 bits (167), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/189 (23%), Positives = 93/189 (49%), Gaps = 7/189 (3%)
Query: 815 RYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+YG V++ + + ++++ L + +++ F KEA + +++H NL L G P
Sbjct: 25 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 84
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
++ ++M GNL L+E + Q+ + + +A ++ + +L N +H D+ +
Sbjct: 85 -YIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N L + ++DFGL RL + + +PE+ + + +SDV++F
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAF 198
Query: 994 GIVLLELLT 1002
G++L E+ T
Sbjct: 199 GVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 68.9 bits (167), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/189 (23%), Positives = 93/189 (49%), Gaps = 7/189 (3%)
Query: 815 RYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+YG V++ + + ++++ L + +++ F KEA + +++H NL L G P
Sbjct: 25 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 84
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
++ ++M GNL L+E + Q+ + + +A ++ + +L N +H D+ +
Sbjct: 85 -YIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N L + ++DFGL RL + + +PE+ + + +SDV++F
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAF 198
Query: 994 GIVLLELLT 1002
G++L E+ T
Sbjct: 199 GVLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1) I
Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1) I
Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
Length = 293
Score = 68.9 bits (167), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/189 (23%), Positives = 93/189 (49%), Gaps = 7/189 (3%)
Query: 815 RYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+YG V++ + + ++++ L + +++ F KEA + +++H NL L G P
Sbjct: 30 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 89
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
++ ++M GNL L+E + Q+ + + +A ++ + +L N +H D+ +
Sbjct: 90 -YIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N L + ++DFGL RL + + +PE+ + + +SDV++F
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAF 203
Query: 994 GIVLLELLT 1002
G++L E+ T
Sbjct: 204 GVLLWEIAT 212
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/189 (23%), Positives = 93/189 (49%), Gaps = 7/189 (3%)
Query: 815 RYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+YG V++ + + ++++ L + +++ F KEA + +++H NL L G P
Sbjct: 23 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 82
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
++ ++M GNL L+E + Q+ + + +A ++ + +L N +H D+ +
Sbjct: 83 -YIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKKNFIHRDLAAR 138
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N L + ++DFGL RL + + +PE+ + + +SDV++F
Sbjct: 139 NCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAF 196
Query: 994 GIVLLELLT 1002
G++L E+ T
Sbjct: 197 GVLLWEIAT 205
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203
Length = 292
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 15/197 (7%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDE-NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR 874
+G V+K ++ + + + + + + F+ E L K RH N+ + GY + P L
Sbjct: 37 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQL- 94
Query: 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLI--ALGVARGLAFLHTSNMVHGDIKP 932
+V + +L H + M+ LI A ARG+ +LH +++H D+K
Sbjct: 95 AIVTQWCEGSSL------YHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKS 148
Query: 933 QNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGET---TKESD 989
N+ D + DFGL G++ +++PE ++ + +SD
Sbjct: 149 NNIFLHEDNTVKIGDFGL-ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 207
Query: 990 VYSFGIVLLELLTGKRP 1006
VY+FGIVL EL+TG+ P
Sbjct: 208 VYAFGIVLYELMTGQLP 224
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 66/250 (26%), Positives = 117/250 (46%), Gaps = 28/250 (11%)
Query: 795 LAETVEATRQFDEENVLSRTRYGLVFK------ACYNDGMVLSIRRLPD---GSLDENLF 845
L E + +F EE L R+G V+K A ++I+ L D G L E F
Sbjct: 3 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREE-F 59
Query: 846 RKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGT-LLQEASHQD------- 897
R EA +++H N+ L G L + ++ Y +G+L L+ + H D
Sbjct: 60 RHEAMLRARLQHPNVVCLLGVVTKDQPLSM-IFSYCSHGDLHEFLVMRSPHSDVGSTDDD 118
Query: 898 ---GHVLNWP-MRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRL 953
L P HL+A +A G+ +L + ++VH D+ +NVL +SD GL R
Sbjct: 119 RTVKSALEPPDFVHLVA-QIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE 177
Query: 954 XXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQD 1012
+ + +++PEA + G+ + +SD++S+G+VL E+ + G +P +
Sbjct: 178 VYAADYYKLLGNSLL-PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN 236
Query: 1013 EDIVKWVKKQ 1022
+D+V+ ++ +
Sbjct: 237 QDVVEMIRNR 246
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870
L ++G+V + ++++ + +GS+ E+ F +EA+ + K+ H L G +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKE 75
Query: 871 PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDI 930
+ +V +Y+ NG L L+ SH G L + V G+AFL + +H D+
Sbjct: 76 YPI-YIVTEYISNGCLLNYLR--SHGKG--LEPSQLLEMCYDVCEGMAFLESHQFIHRDL 130
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGT---LGYVSPEAALTGETTKE 987
+N L D D +SDFG+ R VGT + + +PE + + +
Sbjct: 131 AARNCLVDRDLCVKVSDFGMTRY-----VLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSK 185
Query: 988 SDVYSFGIVLLELLT-GKRPV-MFTQDEDIVK 1017
SDV++FGI++ E+ + GK P ++T E ++K
Sbjct: 186 SDVWAFGILMWEVFSLGKMPYDLYTNSEVVLK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 17/195 (8%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENL---FRKEAEFLGKVRHRNLTVLRGYYAGAPD 872
YG+V+KA + G +++++R+ + DE + +E L ++ H N+ L
Sbjct: 34 YGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERC 93
Query: 873 LRLLVYDYMPNGNLGTLLQE--ASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDI 930
L LV+++M +L +L E QD + + + RG+A H ++H D+
Sbjct: 94 L-TLVFEFM-EKDLKKVLDENKTGLQDSQI------KIYLYQLLRGVAHCHQHRILHRDL 145
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKES-D 989
KPQN+L ++D L+DFGL R V TL Y +P+ + + S D
Sbjct: 146 KPQNLLINSDGALKLADFGLAR---AFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVD 202
Query: 990 VYSFGIVLLELLTGK 1004
++S G + E++TGK
Sbjct: 203 IWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 17/195 (8%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENLFR---KEAEFLGKVRHRNLTVLRGYYAGAPD 872
YG+V+KA + G +++++R+ + DE + +E L ++ H N+ L
Sbjct: 34 YGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERC 93
Query: 873 LRLLVYDYMPNGNLGTLLQEASH--QDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDI 930
L LV+++M +L +L E QD + + + RG+A H ++H D+
Sbjct: 94 L-TLVFEFM-EKDLKKVLDENKTGLQDSQI------KIYLYQLLRGVAHCHQHRILHRDL 145
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKES-D 989
KPQN+L ++D L+DFGL R V TL Y +P+ + + S D
Sbjct: 146 KPQNLLINSDGALKLADFGLAR---AFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVD 202
Query: 990 VYSFGIVLLELLTGK 1004
++S G + E++TGK
Sbjct: 203 IWSIGCIFAEMITGK 217
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDE-NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR 874
+G V+K ++ + + + + + + F+ E L K RH N+ + GY + AP L
Sbjct: 21 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STAPQL- 78
Query: 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHL----IALGVARGLAFLHTSNMVHGDI 930
+V + +L + H++ + IA A+G+ +LH +++H D+
Sbjct: 79 AIVTQWCEGSSL--------YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 130
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGET---TKE 987
K N+ D + DFGL + G++ +++PE + + +
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVIRMQDKNPYSFQ 189
Query: 988 SDVYSFGIVLLELLTGKRP 1006
SDVY+FGIVL EL+TG+ P
Sbjct: 190 SDVYAFGIVLYELMTGQLP 208
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 44/189 (23%), Positives = 94/189 (49%), Gaps = 7/189 (3%)
Query: 815 RYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
++G V++ + + ++++ L + +++ F KEA + +++H NL L G P
Sbjct: 23 QFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 82
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
++ ++M GNL L+E + Q+ + + +A ++ + +L N +H D+ +
Sbjct: 83 -YIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKKNFIHRDLAAR 138
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N L + ++DFGL RL + + +PE+ + + +SDV++F
Sbjct: 139 NCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAF 196
Query: 994 GIVLLELLT 1002
G++L E+ T
Sbjct: 197 GVLLWEIAT 205
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 67.4 bits (163), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 848 EAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRH 907
E L V H + + G + A + ++ DY+ G L +LL+++ P+
Sbjct: 56 ERLMLSIVTHPFIIRMWGTFQDAQQI-FMIMDYIEGGELFSLLRKSQRFPN-----PVAK 109
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
A V L +LH+ ++++ D+KP+N+L D + ++DFG +
Sbjct: 110 FYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKY------VPDVTYXL 163
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
GT Y++PE T K D +SFGI++ E+L G P
Sbjct: 164 CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 103/245 (42%), Gaps = 37/245 (15%)
Query: 796 AETVEATRQFDEENVLSRTRYGLVFKACYNDG--------MVLSIRRLPDGSLDE--NLF 845
A E +++D ++V+ R +V + + M ++ RL L+E
Sbjct: 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREAT 146
Query: 846 RKEAEFLGKVR-HRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
R+E L +V H ++ L Y + LV+D M G L L E
Sbjct: 147 RRETHILRQVAGHPHIITLIDSYESS-SFMFLVFDLMRKGELFDYLTEKVALSEKETRSI 205
Query: 905 MRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXX 964
MR L+ ++FLH +N+VH D+KP+N+L D + + LSDFG
Sbjct: 206 MRSLLE-----AVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGF----SCHLEPGEKL 256
Query: 965 XXXVGTLGYVSPE--AALTGETT----KESDVYSFGIVLLELLTGKRPVMFTQDEDIVKW 1018
GT GY++PE ET KE D+++ G++L LL G P W
Sbjct: 257 RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF----------W 306
Query: 1019 VKKQL 1023
++Q+
Sbjct: 307 HRRQI 311
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 67.0 bits (162), Expect = 6e-11, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 8/181 (4%)
Query: 825 NDGMVLSIRRLPDGSLDENL-FRKEAEFLGKVRHRNLTVLRG--YYAGAPDLRLLVYDYM 881
N G ++++++L D+ F++E + L + + RG Y G LRL V +Y+
Sbjct: 50 NTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRL-VMEYL 108
Query: 882 PNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADF 941
P+G L LQ + L+ L + + +G+ +L + VH D+ +N+L +++
Sbjct: 109 PSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEA 164
Query: 942 EAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELL 1001
++DFGL +L + + +PE+ +++SDV+SFG+VL EL
Sbjct: 165 HVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 224
Query: 1002 T 1002
T
Sbjct: 225 T 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 67.0 bits (162), Expect = 6e-11, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 8/181 (4%)
Query: 825 NDGMVLSIRRLPDGSLDENL-FRKEAEFLGKVRHRNLTVLRG--YYAGAPDLRLLVYDYM 881
N G ++++++L D+ F++E + L + + RG Y G LRL V +Y+
Sbjct: 38 NTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRL-VMEYL 96
Query: 882 PNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADF 941
P+G L LQ + L+ L + + +G+ +L + VH D+ +N+L +++
Sbjct: 97 PSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEA 152
Query: 942 EAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELL 1001
++DFGL +L + + +PE+ +++SDV+SFG+VL EL
Sbjct: 153 HVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 212
Query: 1002 T 1002
T
Sbjct: 213 T 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 67.0 bits (162), Expect = 6e-11, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 8/181 (4%)
Query: 825 NDGMVLSIRRLPDGSLDENL-FRKEAEFLGKVRHRNLTVLRG--YYAGAPDLRLLVYDYM 881
N G ++++++L D+ F++E + L + + RG Y G LRL V +Y+
Sbjct: 37 NTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRL-VMEYL 95
Query: 882 PNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADF 941
P+G L LQ + L+ L + + +G+ +L + VH D+ +N+L +++
Sbjct: 96 PSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEA 151
Query: 942 EAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELL 1001
++DFGL +L + + +PE+ +++SDV+SFG+VL EL
Sbjct: 152 HVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 211
Query: 1002 T 1002
T
Sbjct: 212 T 212
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide
Length = 350
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 805 FDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVL 863
+ + V+ +G+V++A D G +++I+++ G +N +E + + K+ H N+ L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN---RELQIMRKLDHCNIVRL 78
Query: 864 RGYYAGAPDLRLLVY-----DYMPNGNLGTLLQEASHQDGHVLNWPMRH--LIALGVARG 916
R ++ + + + VY DY+P T+ + A H P+ + L + R
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVP----ATVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 917 LAFLHTSNMVHGDIKPQNVLFDADFEA-HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
LA++H+ + H DIKPQN+L D D L DFG + + Y +
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSXICSRYYRA 190
Query: 976 PEAAL-TGETTKESDVYSFGIVLLELLTGK 1004
PE + T DV+S G VL ELL G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 805 FDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVL 863
+ + V+ +G+V++A D G +++I+++ G +N +E + + K+ H N+ L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN---RELQIMRKLDHCNIVRL 78
Query: 864 RGYYAGAPDLRLLVY-----DYMPNGNLGTLLQEASHQDGHVLNWPMRH--LIALGVARG 916
R ++ + + + VY DY+P T+ + A H P+ + L + R
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 917 LAFLHTSNMVHGDIKPQNVLFDADFEA-HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
LA++H+ + H DIKPQN+L D D L DFG + + Y +
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSYICSRYYRA 190
Query: 976 PEAAL-TGETTKESDVYSFGIVLLELLTGK 1004
PE + T DV+S G VL ELL G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 805 FDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVL 863
+ + V+ +G+V++A D G +++I+++ G +N +E + + K+ H N+ L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN---RELQIMRKLDHCNIVRL 78
Query: 864 RGYYAGAPDLRLLVY-----DYMPNGNLGTLLQEASHQDGHVLNWPMRH--LIALGVARG 916
R ++ + + + VY DY+P T+ + A H P+ + L + R
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 917 LAFLHTSNMVHGDIKPQNVLFDADFEA-HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
LA++H+ + H DIKPQN+L D D L DFG + + Y +
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSYICSRYYRA 190
Query: 976 PEAAL-TGETTKESDVYSFGIVLLELLTGK 1004
PE + T DV+S G VL ELL G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 23/211 (10%)
Query: 805 FDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLDENLFR-KEAEFLGKVRHRNLTV 862
+ + V+ +G+V++A D G +++I+++ L + F+ +E + + K+ H N+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 77
Query: 863 LRGYYAGAPDLRLLVY-----DYMPNGNLGTLLQEASHQDGHVLNWPMRH--LIALGVAR 915
LR ++ + + + +VY DY+P T+ + A H P+ + L + R
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEA-HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
LA++H+ + H DIKPQN+L D D L DFG + + Y
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSXICSRYYR 189
Query: 975 SPEAAL-TGETTKESDVYSFGIVLLELLTGK 1004
+PE + T DV+S G VL ELL G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) With
Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) With
Inhibitor
Length = 350
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 25/183 (13%)
Query: 830 LSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNL--- 886
++I R+ +E+ R+E L ++H N+ R + L +V DY G+L
Sbjct: 57 INISRMSSKEREES--RREVAVLANMKHPNIVQYRESFEENGSL-YIVMDYCEGGDLFKR 113
Query: 887 -----GTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADF 941
G L QE +L+W ++ +AL +H ++H DIK QN+ D
Sbjct: 114 INAQKGVLFQE-----DQILDWFVQICLAL------KHVHDRKILHRDIKSQNIFLTKDG 162
Query: 942 EAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELL 1001
L DFG+ R+ +GT Y+SPE +SD+++ G VL EL
Sbjct: 163 TVQLGDFGIARV---LNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELC 219
Query: 1002 TGK 1004
T K
Sbjct: 220 TLK 222
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 66.2 bits (160), Expect = 9e-11, Method: Composition-based stats.
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 33/223 (14%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVL 863
F E ++ +G VFKA + DG IRR+ + +E + L K+ H N+
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRV---KYNNEKAEREVKALAKLDHVNIVHY 70
Query: 864 RGYYAG------APDLRLLVYDYMPNG-------------------NLGTLLQEASHQDG 898
G + G D L DY P + GTL Q + G
Sbjct: 71 NGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 130
Query: 899 HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXX 958
L+ + + + +G+ ++H+ ++H D+KP N+ + + DFGL
Sbjct: 131 EKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGL----VTSL 186
Query: 959 XXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELL 1001
GTL Y+SPE + + KE D+Y+ G++L ELL
Sbjct: 187 KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene
Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene
Inhibitor
Length = 282
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDE-NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR 874
+G V+K ++ + + + + + + F+ E L K RH N+ + GY + P L
Sbjct: 23 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQL- 80
Query: 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHL----IALGVARGLAFLHTSNMVHGDI 930
+V + +L L H++ + IA A+G+ +LH +++H D+
Sbjct: 81 AIVTQWCEGSSLYHHL--------HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 132
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGET---TKE 987
K N+ D + DFGL + G++ +++PE + + +
Sbjct: 133 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVIRMQDKNPYSFQ 191
Query: 988 SDVYSFGIVLLELLTGKRP 1006
SDVY+FGIVL EL+TG+ P
Sbjct: 192 SDVYAFGIVLYELMTGQLP 210
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDE-NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR 874
+G V+K ++ + + + + + + F+ E L K RH N+ + GY + P L
Sbjct: 26 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQL- 83
Query: 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHL----IALGVARGLAFLHTSNMVHGDI 930
+V + +L + H++ + IA A+G+ +LH +++H D+
Sbjct: 84 AIVTQWCEGSSL--------YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 135
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGET---TKE 987
K N+ D + DFGL + G++ +++PE + + +
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVIRMQDKNPYSFQ 194
Query: 988 SDVYSFGIVLLELLTGKRP 1006
SDVY+FGIVL EL+TG+ P
Sbjct: 195 SDVYAFGIVLYELMTGQLP 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDE-NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR 874
+G V+K ++ + + + + + + F+ E L K RH N+ + GY + P L
Sbjct: 21 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQL- 78
Query: 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHL----IALGVARGLAFLHTSNMVHGDI 930
+V + +L + H++ + IA A+G+ +LH +++H D+
Sbjct: 79 AIVTQWCEGSSL--------YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 130
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGET---TKE 987
K N+ D + DFGL + G++ +++PE + + +
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVIRMQDKNPYSFQ 189
Query: 988 SDVYSFGIVLLELLTGKRP 1006
SDVY+FGIVL EL+TG+ P
Sbjct: 190 SDVYAFGIVLYELMTGQLP 208
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
Length = 294
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ H +VH DIKPQN+L D++ + DFG+ + +GT+ Y S
Sbjct: 123 GIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAK--ALSETSLTQTNHVLGTVQYFS 180
Query: 976 PEAALTGETTKE-SDVYSFGIVLLELLTGKRP 1006
PE A GE T E +D+YS GIVL E+L G+ P
Sbjct: 181 PEQA-KGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A
[1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With A
[1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDE-NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR 874
+G V+K ++ + + + + + + F+ E L K RH N+ + GY + P L
Sbjct: 26 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQL- 83
Query: 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHL----IALGVARGLAFLHTSNMVHGDI 930
+V + +L L H++ + IA A+G+ +LH +++H D+
Sbjct: 84 AIVTQWCEGSSLYHHL--------HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 135
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGET---TKE 987
K N+ D + DFGL + G++ +++PE + + +
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVIRMQDKNPYSFQ 194
Query: 988 SDVYSFGIVLLELLTGKRP 1006
SDVY+FGIVL EL+TG+ P
Sbjct: 195 SDVYAFGIVLYELMTGQLP 213
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase Erk1
Length = 382
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 13/167 (7%)
Query: 847 KEAEFLGKVRHRNLT----VLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E + L + RH N+ +LR A +V D M +L LL+ + H+
Sbjct: 90 REIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLM-ETDLYKLLKSQQLSNDHICY 148
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H++N++H D+KP N+L + + + DFGL R+
Sbjct: 149 F------LYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTG 202
Query: 963 XXXXXVGTLGYVSPEAALTGE-TTKESDVYSFGIVLLELLTGKRPVM 1008
V T Y +PE L + TK D++S G +L E+L+ RP+
Sbjct: 203 FLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIF 248
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen Synthase
Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen Synthase
Kinase-3 Inhibitors
Length = 424
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 805 FDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLDENLFR-KEAEFLGKVRHRNLTV 862
+ + V+ +G+V++A D G +++I+++ L + F+ +E + + K+ H N+
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 115
Query: 863 LRGYYAGAPDLRLLVY-----DYMPNGNLGTLLQEASHQDGHVLNWPMRH--LIALGVAR 915
LR ++ + + + VY DY+P T+ + A H P+ + L + R
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 171
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEA-HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
LA++H+ + H DIKPQN+L D D L DFG + + Y
Sbjct: 172 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSYICSRYYR 227
Query: 975 SPEAAL-TGETTKESDVYSFGIVLLELLTGK 1004
+PE + T DV+S G VL ELL G+
Sbjct: 228 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I With
Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I With
Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I With
Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I With
Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 805 FDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLDENLFR-KEAEFLGKVRHRNLTV 862
+ + V+ +G+V++A D G +++I+++ L + F+ +E + + K+ H N+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 111
Query: 863 LRGYYAGAPDLRLLVY-----DYMPNGNLGTLLQEASHQDGHVLNWPMRH--LIALGVAR 915
LR ++ + + + VY DY+P T+ + A H P+ + L + R
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEA-HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
LA++H+ + H DIKPQN+L D D L DFG + + Y
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSYICSRYYR 223
Query: 975 SPEAAL-TGETTKESDVYSFGIVLLELLTGK 1004
+PE + T DV+S G VL ELL G+
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With Nms-869553a
Length = 422
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 805 FDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLDENLFR-KEAEFLGKVRHRNLTV 862
+ + V+ +G+V++A D G +++I+++ L + F+ +E + + K+ H N+
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 113
Query: 863 LRGYYAGAPDLRLLVY-----DYMPNGNLGTLLQEASHQDGHVLNWPMRH--LIALGVAR 915
LR ++ + + + VY DY+P T+ + A H P+ + L + R
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 169
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEA-HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
LA++H+ + H DIKPQN+L D D L DFG + + Y
Sbjct: 170 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSYICSRYYR 225
Query: 975 SPEAAL-TGETTKESDVYSFGIVLLELLTGK 1004
+PE + T DV+S G VL ELL G+
Sbjct: 226 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 23/211 (10%)
Query: 805 FDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLDENLFR-KEAEFLGKVRHRNLTV 862
+ + V+ +G+V++A D G +++I+++ L + F+ +E + + K+ H N+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 111
Query: 863 LRGYYAGAPDLRLLVY-----DYMPNGNLGTLLQEASHQDGHVLNWPMRH--LIALGVAR 915
LR ++ + + + VY DY+P T+ + A H P+ + L + R
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEA-HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
LA++H+ + H DIKPQN+L D D L DFG + + Y
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSXICSRYYR 223
Query: 975 SPEAAL-TGETTKESDVYSFGIVLLELLTGK 1004
+PE + T DV+S G VL ELL G+
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 100/207 (48%), Gaps = 14/207 (6%)
Query: 815 RYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR 874
++GLV + + ++I+ + +G++ E F +EAE + K+ H L L G +
Sbjct: 19 QFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI- 77
Query: 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQN 934
LV+++M +G L L+ Q G + + L V G+A+L ++++H D+ +N
Sbjct: 78 CLVFEFMEHGCLSDYLRT---QRGLFAAETLLGM-CLDVCEGMAYLEEASVIHRDLAARN 133
Query: 935 VLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGT---LGYVSPEAALTGETTKESDVY 991
L + +SDFG+ R GT + + SPE + +SDV+
Sbjct: 134 CLVGENQVIKVSDFGMTRF-----VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 188
Query: 992 SFGIVLLELLT-GKRPVMFTQDEDIVK 1017
SFG+++ E+ + GK P + ++V+
Sbjct: 189 SFGVLMWEVFSEGKIPYENRSNSEVVE 215
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed
With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed
With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 805 FDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLDENLFR-KEAEFLGKVRHRNLTV 862
+ + V+ +G+V++A D G +++I+++ L + F+ +E + + K+ H N+
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 105
Query: 863 LRGYYAGAPDLRLLVY-----DYMPNGNLGTLLQEASHQDGHVLNWPMRH--LIALGVAR 915
LR ++ + + + VY DY+P T+ + A H P+ + L + R
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 161
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEA-HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
LA++H+ + H DIKPQN+L D D L DFG + + Y
Sbjct: 162 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSYICSRYYR 217
Query: 975 SPEAAL-TGETTKESDVYSFGIVLLELLTGK 1004
+PE + T DV+S G VL ELL G+
Sbjct: 218 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDE-NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR 874
+G V+K ++ + + + + + + F+ E L K RH N+ + GY + P L
Sbjct: 48 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQL- 105
Query: 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHL----IALGVARGLAFLHTSNMVHGDI 930
+V + +L L H++ + IA A+G+ +LH +++H D+
Sbjct: 106 AIVTQWCEGSSLYHHL--------HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 157
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGET---TKE 987
K N+ D + DFGL + G++ +++PE + + +
Sbjct: 158 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVIRMQDKNPYSFQ 216
Query: 988 SDVYSFGIVLLELLTGKRP 1006
SDVY+FGIVL EL+TG+ P
Sbjct: 217 SDVYAFGIVLYELMTGQLP 235
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4-
Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4-
Arylmaleimide Inhibitor
Length = 391
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 805 FDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLDENLFR-KEAEFLGKVRHRNLTV 862
+ + V+ +G+V++A D G +++I+++ L + F+ +E + + K+ H N+
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 82
Query: 863 LRGYYAGAPDLRLLVY-----DYMPNGNLGTLLQEASHQDGHVLNWPMRH--LIALGVAR 915
LR ++ + + + VY DY+P T+ + A H P+ + L + R
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 138
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEA-HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
LA++H+ + H DIKPQN+L D D L DFG + + Y
Sbjct: 139 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSYICSRYYR 194
Query: 975 SPEAAL-TGETTKESDVYSFGIVLLELLTGK 1004
+PE + T DV+S G VL ELL G+
Sbjct: 195 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 23/211 (10%)
Query: 805 FDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLDENLFR-KEAEFLGKVRHRNLTV 862
+ + V+ +G+V++A D G +++I+++ L + F+ +E + + K+ H N+
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 89
Query: 863 LRGYYAGAPDLRLLVY-----DYMPNGNLGTLLQEASHQDGHVLNWPMRH--LIALGVAR 915
LR ++ + + + VY DY+P T+ + A H P+ + L + R
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEA-HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
LA++H+ + H DIKPQN+L D D L DFG + + Y
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSXICSRYYR 201
Query: 975 SPEAAL-TGETTKESDVYSFGIVLLELLTGK 1004
+PE + T DV+S G VL ELL G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 805 FDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLDENLFR-KEAEFLGKVRHRNLTV 862
+ + V+ +G+V++A D G +++I+++ L + F+ +E + + K+ H N+
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 156
Query: 863 LRGYYAGAPDLRLLVY-----DYMPNGNLGTLLQEASHQDGHVLNWPMRH--LIALGVAR 915
LR ++ + + + VY DY+P T+ + A H P+ + L + R
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 212
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEA-HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
LA++H+ + H DIKPQN+L D D L DFG + + Y
Sbjct: 213 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSYICSRYYR 268
Query: 975 SPEAAL-TGETTKESDVYSFGIVLLELLTGK 1004
+PE + T DV+S G VL ELL G+
Sbjct: 269 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime Furopyridine
Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime Furopyridine
Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In Complex
With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In Complex
With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDE-NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR 874
+G V+K ++ + + + + + + F+ E L K RH N+ + GY + P L
Sbjct: 49 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQL- 106
Query: 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHL----IALGVARGLAFLHTSNMVHGDI 930
+V + +L L H++ + IA A+G+ +LH +++H D+
Sbjct: 107 AIVTQWCEGSSLYHHL--------HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 158
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGET---TKE 987
K N+ D + DFGL + G++ +++PE + + +
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVIRMQDKNPYSFQ 217
Query: 988 SDVYSFGIVLLELLTGKRP 1006
SDVY+FGIVL EL+TG+ P
Sbjct: 218 SDVYAFGIVLYELMTGQLP 236
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 23/211 (10%)
Query: 805 FDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLDENLFR-KEAEFLGKVRHRNLTV 862
+ + V+ +G+V++A D G +++I+++ L + F+ +E + + K+ H N+
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 85
Query: 863 LRGYYAGAPDLRLLVY-----DYMPNGNLGTLLQEASHQDGHVLNWPMRH--LIALGVAR 915
LR ++ + + + VY DY+P T+ + A H P+ + L + R
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 141
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEA-HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
LA++H+ + H DIKPQN+L D D L DFG + + Y
Sbjct: 142 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSXICSRYYR 197
Query: 975 SPEAAL-TGETTKESDVYSFGIVLLELLTGK 1004
+PE + T DV+S G VL ELL G+
Sbjct: 198 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide
Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide
Peptide
Length = 378
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 23/211 (10%)
Query: 805 FDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLDENLFR-KEAEFLGKVRHRNLTV 862
+ + V+ +G+V++A D G +++I+++ L + F+ +E + + K+ H N+
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 96
Query: 863 LRGYYAGAPDLRLLVY-----DYMPNGNLGTLLQEASHQDGHVLNWPMRH--LIALGVAR 915
LR ++ + + + VY DY+P T+ + A H P+ + L + R
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 152
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEA-HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
LA++H+ + H DIKPQN+L D D L DFG + + Y
Sbjct: 153 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSXICSRYYR 208
Query: 975 SPEAAL-TGETTKESDVYSFGIVLLELLTGK 1004
+PE + T DV+S G VL ELL G+
Sbjct: 209 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 23/211 (10%)
Query: 805 FDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLDENLFR-KEAEFLGKVRHRNLTV 862
+ + V+ +G+V++A D G +++I+++ L + F+ +E + + K+ H N+
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 89
Query: 863 LRGYYAGAPDLRLLVY-----DYMPNGNLGTLLQEASHQDGHVLNWPMRH--LIALGVAR 915
LR ++ + + + VY DY+P T+ + A H P+ + L + R
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEA-HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
LA++H+ + H DIKPQN+L D D L DFG + + Y
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSXICSRYYR 201
Query: 975 SPEAAL-TGETTKESDVYSFGIVLLELLTGK 1004
+PE + T DV+S G VL ELL G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 805 FDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLDENLFR-KEAEFLGKVRHRNLTV 862
+ + V+ +G+V++A D G +++I+++ L + F+ +E + + K+ H N+
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 90
Query: 863 LRGYYAGAPDLRLLVY-----DYMPNGNLGTLLQEASHQDGHVLNWPMRH--LIALGVAR 915
LR ++ + + + VY DY+P T+ + A H P+ + L + R
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 146
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEA-HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
LA++H+ + H DIKPQN+L D D L DFG + + Y
Sbjct: 147 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSYICSRYYR 202
Query: 975 SPEAAL-TGETTKESDVYSFGIVLLELLTGK 1004
+PE + T DV+S G VL ELL G+
Sbjct: 203 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 23/211 (10%)
Query: 805 FDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLDENLFR-KEAEFLGKVRHRNLTV 862
+ + V+ +G+V++A D G +++I+++ L + F+ +E + + K+ H N+
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 81
Query: 863 LRGYYAGAPDLRLLVY-----DYMPNGNLGTLLQEASHQDGHVLNWPMRH--LIALGVAR 915
LR ++ + + + VY DY+P T+ + A H P+ + L + R
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 137
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEA-HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
LA++H+ + H DIKPQN+L D D L DFG + + Y
Sbjct: 138 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSXICSRYYR 193
Query: 975 SPEAAL-TGETTKESDVYSFGIVLLELLTGK 1004
+PE + T DV+S G VL ELL G+
Sbjct: 194 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide
And Leucettine L4
Length = 350
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 805 FDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLDENLFR-KEAEFLGKVRHRNLTV 862
+ + V+ +G+V++A D G +++I+++ L + F+ +E + + K+ H N+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 77
Query: 863 LRGYYAGAPDLRLLVY-----DYMPNGNLGTLLQEASHQDGHVLNWPMRH--LIALGVAR 915
LR ++ + + + VY DY+P T+ + A H P+ + L + R
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEA-HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
LA++H+ + H DIKPQN+L D D L DFG + + Y
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSYICSRYYR 189
Query: 975 SPEAAL-TGETTKESDVYSFGIVLLELLTGK 1004
+PE + T DV+S G VL ELL G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide
And Inhibitor 7d
Length = 350
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 23/211 (10%)
Query: 805 FDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLDENLFR-KEAEFLGKVRHRNLTV 862
+ + V+ +G+V++A D G +++I+++ L + F+ +E + + K+ H N+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 77
Query: 863 LRGYYAGAPDLRLLVY-----DYMPNGNLGTLLQEASHQDGHVLNWPMRH--LIALGVAR 915
LR ++ + + + VY DY+P T+ + A H P+ + L + R
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEA-HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
LA++H+ + H DIKPQN+L D D L DFG + + Y
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSXICSRYYR 189
Query: 975 SPEAAL-TGETTKESDVYSFGIVLLELLTGK 1004
+PE + T DV+S G VL ELL G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta
In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta
In Complex With An Inhibitor
Length = 350
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 23/211 (10%)
Query: 805 FDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLDENLFR-KEAEFLGKVRHRNLTV 862
+ + V+ +G+V++A D G +++I+++ L + F+ +E + + K+ H N+
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 78
Query: 863 LRGYYAGAPDLRLLVY-----DYMPNGNLGTLLQEASHQDGHVLNWPMRH--LIALGVAR 915
LR ++ + + + VY DY+P T+ + A H P+ + L + R
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 134
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEA-HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
LA++H+ + H DIKPQN+L D D L DFG + + Y
Sbjct: 135 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSXICSRYYR 190
Query: 975 SPEAAL-TGETTKESDVYSFGIVLLELLTGK 1004
+PE + T DV+S G VL ELL G+
Sbjct: 191 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDE-NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR 874
+G V+K ++ + + + + + + F+ E L K RH N+ + GY + P L
Sbjct: 21 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQL- 78
Query: 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHL----IALGVARGLAFLHTSNMVHGDI 930
+V + +L + H++ + IA A+G+ +LH +++H D+
Sbjct: 79 AIVTQWCEGSSL--------YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 130
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGET---TKE 987
K N+ D + DFGL G++ +++PE + + +
Sbjct: 131 KSNNIFLHEDLTVKIGDFGL-ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 988 SDVYSFGIVLLELLTGKRP 1006
SDVY+FGIVL EL+TG+ P
Sbjct: 190 SDVYAFGIVLYELMTGQLP 208
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 23/211 (10%)
Query: 805 FDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLDENLFR-KEAEFLGKVRHRNLTV 862
+ + V+ +G+V++A D G +++I+++ L + F+ +E + + K+ H N+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 77
Query: 863 LRGYYAGAPDLRLLVY-----DYMPNGNLGTLLQEASHQDGHVLNWPMRH--LIALGVAR 915
LR ++ + + + VY DY+P T+ + A H P+ + L + R
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEA-HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
LA++H+ + H DIKPQN+L D D L DFG + + Y
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSXICSRYYR 189
Query: 975 SPEAAL-TGETTKESDVYSFGIVLLELLTGK 1004
+PE + T DV+S G VL ELL G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With Flavonoid
Glycoside Quercitrin
Length = 305
Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 804 QFDEENVLSRTRYGLVF---KACYNDGMVL-SIRRLPDGSL---DENLFRKEAEFLGKVR 856
QF+ VL + +G VF K +D L +++ L +L D + E + L +V
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 85
Query: 857 HRNLTVLRGYYAGAPDLRL-LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
H + L +YA + +L L+ D++ G+L T L + + + + L A
Sbjct: 86 HPFIVKL--HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL-----AL 138
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L LH+ +++ D+KP+N+L D + L+DFGL + GT+ Y++
Sbjct: 139 ALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMA 195
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
PE T+ +D +SFG+++ E+LTG P
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 804 QFDEENVLSRTRYGLVF---KACYNDGMVL-SIRRLPDGSL---DENLFRKEAEFLGKVR 856
QF+ VL + +G VF K +D L +++ L +L D + E + L +V
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 857 HRNLTVLRGYYAGAPDLRL-LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
H + L +YA + +L L+ D++ G+L T L + + + + L A
Sbjct: 85 HPFIVKL--HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL-----AL 137
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L LH+ +++ D+KP+N+L D + L+DFGL + GT+ Y++
Sbjct: 138 ALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMA 194
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
PE T+ +D +SFG+++ E+LTG P
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 804 QFDEENVLSRTRYGLVF---KACYNDGMVL-SIRRLPDGSL---DENLFRKEAEFLGKVR 856
QF+ VL + +G VF K +D L +++ L +L D + E + L +V
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 857 HRNLTVLRGYYAGAPDLRL-LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
H + L +YA + +L L+ D++ G+L T L + + + + L A
Sbjct: 85 HPFIVKL--HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL-----AL 137
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L LH+ +++ D+KP+N+L D + L+DFGL + GT+ Y++
Sbjct: 138 ALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMA 194
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
PE T+ +D +SFG+++ E+LTG P
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDE-NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR 874
+G V+K ++ + + + + + + F+ E L K RH N+ + GY + P L
Sbjct: 41 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQL- 98
Query: 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHL----IALGVARGLAFLHTSNMVHGDI 930
+V + +L L H++ + IA A+G+ +LH +++H D+
Sbjct: 99 AIVTQWCEGSSLYHHL--------HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 150
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGET---TKE 987
K N+ D + DFGL G++ +++PE + + +
Sbjct: 151 KSNNIFLHEDLTVKIGDFGLA-TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 209
Query: 988 SDVYSFGIVLLELLTGKRP 1006
SDVY+FGIVL EL+TG+ P
Sbjct: 210 SDVYAFGIVLYELMTGQLP 228
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats.
Identities = 60/214 (28%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 798 TVEATRQFDEENVLSRTRYGLVFKACY---NDGM--VLSIRRLPD--GSLDENLFRKEAE 850
TV R + L +G V CY NDG +++++ L G + +++E +
Sbjct: 26 TVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEID 85
Query: 851 FLGKVRHRNLTVLRGYY--AGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHL 908
L + H ++ +G AGA L+L V +Y+P G+L L H + L
Sbjct: 86 ILRTLYHEHIIKYKGCCEDAGAASLQL-VMEYVPLGSLRDYLPR------HSIGLAQLLL 138
Query: 909 IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXV 968
A + G+A+LH + +H D+ +NVL D D + DFGL +
Sbjct: 139 FAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGD 198
Query: 969 GTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +PE + SDV+SFG+ L ELLT
Sbjct: 199 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 827 GMVLSIRRLPDGSLD--ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNG 884
G + +++ +P +L E+ E L K++H N+ L Y +P+ LV + G
Sbjct: 47 GKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYE-SPNHLYLVMQLVSGG 105
Query: 885 NLGTLLQEA---SHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLF---D 938
L + E + +D L +R ++ + +LH +VH D+KP+N+L+ D
Sbjct: 106 ELFDRIVEKGFYTEKDASTL---IRQVL-----DAVYYLHRMGIVHRDLKPENLLYYSQD 157
Query: 939 ADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLL 998
+ + +SDFGL ++ GT GYV+PE +K D +S G++
Sbjct: 158 EESKIMISDFGLSKMEGKGDVMSTA----CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 213
Query: 999 ELLTGKRPVMFTQDEDIVKWVKK 1021
LL G P D + + + K
Sbjct: 214 ILLCGYPPFYDENDSKLFEQILK 236
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 18/235 (7%)
Query: 780 DNGGPKLVMFNNKITLAETVEATRQFDEENVLSRTRYGLVF---KACYND-GMVLSIRRL 835
D G K + + + F+ VL + +G VF K D G + +++ L
Sbjct: 5 DEGVLKEISITHHVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVL 64
Query: 836 PDGSL---DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL-LVYDYMPNGNLGTLLQ 891
+L D + E + L V H V++ +YA + +L L+ D++ G+L T L
Sbjct: 65 KKATLKVRDRVRTKMERDILADVNHP--FVVKLHYAFQTEGKLYLILDFLRGGDLFTRLS 122
Query: 892 EASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLD 951
+ + + + L A GL LH+ +++ D+KP+N+L D + L+DFGL
Sbjct: 123 KEVMFTEEDVKFYLAEL-----ALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 177
Query: 952 RLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+ GT+ Y++PE + +D +S+G+++ E+LTG P
Sbjct: 178 K---EAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDE-NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR 874
+G V+K ++ + + + + + + F+ E L K RH N+ + GY + P L
Sbjct: 49 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQL- 106
Query: 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHL----IALGVARGLAFLHTSNMVHGDI 930
+V + +L L H++ + IA A+G+ +LH +++H D+
Sbjct: 107 AIVTQWCEGSSLYHHL--------HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 158
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGET---TKE 987
K N+ D + DFGL G++ +++PE + + +
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLA-TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 988 SDVYSFGIVLLELLTGKRP 1006
SDVY+FGIVL EL+TG+ P
Sbjct: 218 SDVYAFGIVLYELMTGQLP 236
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 815 RYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGY-YAGAPDL 873
++GLV + + ++I+ + +GS+ E+ F +EAE + K+ H L L G AP
Sbjct: 39 QFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAP-- 96
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
LV+++M +G L L+ Q G + + L V G+A+L + ++H D+ +
Sbjct: 97 ICLVFEFMEHGCLSDYLRT---QRGLFAAETLLGM-CLDVCEGMAYLEEACVIHRDLAAR 152
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGT---LGYVSPEAALTGETTKESDV 990
N L + +SDFG+ R GT + + SPE + +SDV
Sbjct: 153 NCLVGENQVIKVSDFGMTRF-----VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 207
Query: 991 YSFGIVLLELLT-GKRPVMFTQDEDIVK 1017
+SFG+++ E+ + GK P + ++V+
Sbjct: 208 WSFGVLMWEVFSEGKIPYENRSNSEVVE 235
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 11/133 (8%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMV-HGDIKPQN 934
+ ++M G+L +L+EA +L +++ V RGLA+L + + H D+KP N
Sbjct: 91 ICMEHMDGGSLDQVLKEAKRIPEEILGK-----VSIAVLRGLAYLREKHQIMHRDVKPSN 145
Query: 935 VLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFG 994
+L ++ E L DFG+ VGT Y++PE + +SD++S G
Sbjct: 146 ILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMG 200
Query: 995 IVLLELLTGKRPV 1007
+ L+EL G+ P+
Sbjct: 201 LSLVELAVGRYPI 213
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F EA + ++RH NL L G +V +YM G+L L+ VL
Sbjct: 52 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS---VLGGD 108
Query: 905 MRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXX 964
+L V + +L +N VH D+ +NVL D A +SDFGL +
Sbjct: 109 CLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK--------EASS 160
Query: 965 XXXVGTL--GYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
G L + +PEA + +SDV+SFGI+L E+ + G+ P +D+V V+K
Sbjct: 161 TQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK 220
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F EA + ++RH NL L G +V +YM G+L L+ VL
Sbjct: 46 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS---VLGGD 102
Query: 905 MRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXX 964
+L V + +L +N VH D+ +NVL D A +SDFGL +
Sbjct: 103 CLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK--------EASS 154
Query: 965 XXXVGTL--GYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
G L + +PEA + + +SDV+SFGI+L E+ + G+ P +D+V V+K
Sbjct: 155 TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK 214
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F EA + ++RH NL L G +V +YM G+L L+ VL
Sbjct: 61 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS---VLGGD 117
Query: 905 MRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXX 964
+L V + +L +N VH D+ +NVL D A +SDFGL +
Sbjct: 118 CLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK--------EASS 169
Query: 965 XXXVGTL--GYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
G L + +PEA + + +SDV+SFGI+L E+ + G+ P +D+V V+K
Sbjct: 170 TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK 229
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
Length = 450
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F EA + ++RH NL L G +V +YM G+L L+ VL
Sbjct: 233 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS---VLGGD 289
Query: 905 MRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXX 964
+L V + +L +N VH D+ +NVL D A +SDFGL +
Sbjct: 290 CLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK--------EASS 341
Query: 965 XXXVGTL--GYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
G L + +PEA + + +SDV+SFGI+L E+ + G+ P +D+V V+K
Sbjct: 342 TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK 401
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 847 KEAEFLGKVRHRNLT----VLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E + L + RH N+ ++R +V D M +L LL+ + H+
Sbjct: 78 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICY 136
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H++N++H D+KP N+L + + + DFGL R+
Sbjct: 137 F------LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 190
Query: 963 XXXXXVGTLGYVSPEAALTGE-TTKESDVYSFGIVLLELLTGKRPVM 1008
V T Y +PE L + TK D++S G +L E+L+ RP+
Sbjct: 191 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 847 KEAEFLGKVRHRNLT----VLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E + L + RH N+ ++R +V D M +L LL+ + H+
Sbjct: 70 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICY 128
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H++N++H D+KP N+L + + + DFGL R+
Sbjct: 129 F------LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 182
Query: 963 XXXXXVGTLGYVSPEAALTGE-TTKESDVYSFGIVLLELLTGKRPVM 1008
V T Y +PE L + TK D++S G +L E+L+ RP+
Sbjct: 183 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIF 228
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 847 KEAEFLGKVRHRNLT----VLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E + L + RH N+ ++R +V D M +L LL+ + H+
Sbjct: 90 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICY 148
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H++N++H D+KP N+L + + + DFGL R+
Sbjct: 149 F------LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 202
Query: 963 XXXXXVGTLGYVSPEAALTGE-TTKESDVYSFGIVLLELLTGKRPVM 1008
V T Y +PE L + TK D++S G +L E+L+ RP+
Sbjct: 203 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIF 248
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 63.2 bits (152), Expect = 9e-10, Method: Composition-based stats.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 17/209 (8%)
Query: 808 ENVLSRTRYGLVFKACYNDGM-------VLSIRRLPDGSLDENLFRKEAEFLGKVRHRNL 860
+ V+ + +G+V+ Y D + S+ R+ + E R E + + H N+
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLR-EGLLMRGLNHPNV 84
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALG--VARGLA 918
L G L ++ YM +G+L ++ N ++ LI+ G VARG+
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQR------NPTVKDLISFGLQVARGME 138
Query: 919 FLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR-LXXXXXXXXXXXXXXVGTLGYVSPE 977
+L VH D+ +N + D F ++DFGL R + + + + E
Sbjct: 139 YLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALE 198
Query: 978 AALTGETTKESDVYSFGIVLLELLTGKRP 1006
+ T T +SDV+SFG++L ELLT P
Sbjct: 199 SLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 7/160 (4%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYA--GAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+KE E L + H N+ +G G ++L++ +++P+G+L L + ++ +N
Sbjct: 70 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIM-EFLPSGSLKEYLPKNKNK----IN 124
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ A+ + +G+ +L + VH D+ +NVL +++ + + DFGL +
Sbjct: 125 LKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXT 184
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +PE + + SDV+SFG+ L ELLT
Sbjct: 185 VKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 60/233 (25%), Positives = 100/233 (42%), Gaps = 26/233 (11%)
Query: 791 NKITLAETVEATRQFDEENVLSRTRYGLVFKACY-NDGMVLSIRRLPDGSLDENLFRKEA 849
++I L+ + F+ ++ YG V+K + G + +I+ + +E ++E
Sbjct: 12 DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEI 71
Query: 850 EFLGKV-RHRNLTVLRGYY-----AGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNW 903
L K HRN+ G + G D LV ++ G++ L++ G+ L
Sbjct: 72 NMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK---GNTLKE 128
Query: 904 PMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFG----LDRLXXXXXX 959
I + RGL+ LH ++H DIK QNVL + E L DFG LDR
Sbjct: 129 EWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR------- 181
Query: 960 XXXXXXXXVGTLGYVSPEAALTGETTK-----ESDVYSFGIVLLELLTGKRPV 1007
+GT +++PE E +SD++S GI +E+ G P+
Sbjct: 182 TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 7/160 (4%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYA--GAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+KE E L + H N+ +G G ++L++ +++P+G+L L + ++ +N
Sbjct: 58 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIM-EFLPSGSLKEYLPKNKNK----IN 112
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ A+ + +G+ +L + VH D+ +NVL +++ + + DFGL +
Sbjct: 113 LKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXT 172
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +PE + + SDV+SFG+ L ELLT
Sbjct: 173 VKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 827 GMVLSIRRLPDGSLDENL--FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNG 884
G +++I+ + +L +L + E E L +RH+++ L A + +V +Y P G
Sbjct: 35 GEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKI-FMVLEYCPGG 93
Query: 885 NLGTLL---QEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADF 941
L + S ++ V+ R +++ +A++H+ H D+KP+N+LFD
Sbjct: 94 ELFDYIISQDRLSEEETRVV---FRQIVS-----AVAYVHSQGYAHRDLKPENLLFDEYH 145
Query: 942 EAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGET--TKESDVYSFGIVLLE 999
+ L DFGL G+L Y +PE + G++ E+DV+S GI+L
Sbjct: 146 KLKLIDFGL--CAKPKGNKDYHLQTCCGSLAYAAPE-LIQGKSYLGSEADVWSMGILLYV 202
Query: 1000 LLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
L+ G P D+D V + K++ +G+
Sbjct: 203 LMCGFLPF----DDDNVMALYKKIMRGK 226
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 13/167 (7%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLL--VY--DYMPNGNLGTLLQEASHQDGHVLN 902
+E + L + RH N+ + AP + + VY ++ +L LL+ + H+
Sbjct: 90 REIKILLRFRHENIIGINDI-IRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICY 148
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H++N++H D+KP N+L + + + DFGL R+
Sbjct: 149 F------LYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTG 202
Query: 963 XXXXXVGTLGYVSPEAALTGE-TTKESDVYSFGIVLLELLTGKRPVM 1008
V T Y +PE L + TK D++S G +L E+L+ RP+
Sbjct: 203 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIF 248
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A 1-O-Tolyl-1,2,
3-Triazole-4-Carboxamide
Length = 348
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ A D HV
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHV-- 123
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 124 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 173
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 174 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLR 864
F++ + L G+VFK + ++ R+L + + + L + N +
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 129
Query: 865 GYY-AGAPDLRL-LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHT 922
G+Y A D + + ++M G+L +L++A +L +++ V +GL +L
Sbjct: 130 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK-----VSIAVIKGLTYLRE 184
Query: 923 SN-MVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALT 981
+ ++H D+KP N+L ++ E L DFG+ VGT Y+SPE
Sbjct: 185 KHKIMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPERLQG 239
Query: 982 GETTKESDVYSFGIVLLELLTGKRPV 1007
+ +SD++S G+ L+E+ G+ P+
Sbjct: 240 THYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 62.4 bits (150), Expect = 2e-09, Method: Composition-based stats.
Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 25/212 (11%)
Query: 803 RQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTV 862
++ + E V+ R +G+V KA + V +I+++ S + F E L +V H N+
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWRAKDV-AIKQIESES-ERKAFIVELRQLSRVNHPNIVK 66
Query: 863 LRGYYAGAPDLRLLVYDYMPNGNLGTLLQEAS----HQDGHVLNWPMRHLIALGVARGLA 918
L Y + LV +Y G+L +L A + H ++W L ++G+A
Sbjct: 67 L---YGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVA 117
Query: 919 FLHTSN---MVHGDIKPQNVLFDADFEA-HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
+LH+ ++H D+KP N+L A + DFG G+ ++
Sbjct: 118 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG------TACDIQTHMTNNKGSAAWM 171
Query: 975 SPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+PE +++ DV+S+GI+L E++T ++P
Sbjct: 172 APEVFEGSNYSEKCDVFSWGIILWEVITRRKP 203
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its
Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 62.4 bits (150), Expect = 2e-09, Method: Composition-based stats.
Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 25/212 (11%)
Query: 803 RQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTV 862
++ + E V+ R +G+V KA + V +I+++ S + F E L +V H N+
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWRAKDV-AIKQIESES-ERKAFIVELRQLSRVNHPNIVK 65
Query: 863 LRGYYAGAPDLRLLVYDYMPNGNLGTLLQEAS----HQDGHVLNWPMRHLIALGVARGLA 918
L Y + LV +Y G+L +L A + H ++W L ++G+A
Sbjct: 66 L---YGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVA 116
Query: 919 FLHTSN---MVHGDIKPQNVLFDADFEA-HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
+LH+ ++H D+KP N+L A + DFG G+ ++
Sbjct: 117 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG------TACDIQTHMTNNKGSAAWM 170
Query: 975 SPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+PE +++ DV+S+GI+L E++T ++P
Sbjct: 171 APEVFEGSNYSEKCDVFSWGIILWEVITRRKP 202
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of Activation
For Tec Family Kinases
Length = 283
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 19/210 (9%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870
L ++G+V + ++I+ + +GS+ E+ F +EA+ + + H L L G
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 871 PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIAL--GVARGLAFLHTSNMVHG 928
+ ++ +YM NG L L+E H+ + + L+ + V + +L + +H
Sbjct: 92 RPI-FIITEYMANGCLLNYLREMRHR------FQTQQLLEMCKDVCEAMEYLESKQFLHR 144
Query: 929 DIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGT---LGYVSPEAALTGETT 985
D+ +N L + +SDFGL R VG+ + + PE + + +
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRY-----VLDDEETSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 986 KESDVYSFGIVLLELLT-GKRPV-MFTQDE 1013
+SD+++FG+++ E+ + GK P FT E
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPYERFTNSE 229
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQEASHQDGHVL 901
+E + L + RH N+ + AP + +V D M +L LL+ + H+
Sbjct: 70 REIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 127
Query: 902 NWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXX 961
+ + + RGL ++H++N++H D+KP N+L + + + DFGL R+
Sbjct: 128 YFLYQ------ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 181
Query: 962 XXXXXXVGTLGYVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPV 1007
V T Y +PE L + TK D++S G +L E+L+ RP+
Sbjct: 182 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPI 227
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 54/218 (24%), Positives = 92/218 (42%), Gaps = 36/218 (16%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVL 863
F E ++ +G VFKA + DG I+R+ + +E + L K+ H N+
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRV---KYNNEKAEREVKALAKLDHVNIVHY 69
Query: 864 RGYYAGAPDLRLLVYDYMPNG--------------------NLGTLLQEASHQDGHVLNW 903
G + G +DY P + GTL Q + G L+
Sbjct: 70 NGCWDG--------FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDK 121
Query: 904 PMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXX 963
+ + + +G+ ++H+ +++ D+KP N+ + + DFGL
Sbjct: 122 VLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGL----VTSLKNDGK 177
Query: 964 XXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELL 1001
GTL Y+SPE + + KE D+Y+ G++L ELL
Sbjct: 178 RXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHV-- 127
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 128 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR------HTDD 177
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQEASHQDGHVL 901
+E + L + RH N+ + AP + +V D M +L LL+ + H+
Sbjct: 70 REIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 127
Query: 902 NWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXX 961
+ + + RGL ++H++N++H D+KP N+L + + + DFGL R+
Sbjct: 128 YFLYQ------ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 181
Query: 962 XXXXXXVGTLGYVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPV 1007
V T Y +PE L + TK D++S G +L E+L+ RP+
Sbjct: 182 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPI 227
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-4-
Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-8-
Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 19/210 (9%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870
L ++G+V + ++I+ + +GS+ E+ F +EA+ + + H L L G
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 82
Query: 871 PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIAL--GVARGLAFLHTSNMVHG 928
+ ++ +YM NG L L+E H+ + + L+ + V + +L + +H
Sbjct: 83 RPI-FIITEYMANGCLLNYLREMRHR------FQTQQLLEMCKDVCEAMEYLESKQFLHR 135
Query: 929 DIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGT---LGYVSPEAALTGETT 985
D+ +N L + +SDFGL R VG+ + + PE + + +
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRY-----VLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 190
Query: 986 KESDVYSFGIVLLELLT-GKRPV-MFTQDE 1013
+SD+++FG+++ E+ + GK P FT E
Sbjct: 191 SKSDIWAFGVLMWEIYSLGKMPYERFTNSE 220
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 19/210 (9%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870
L ++G+V + ++I+ + +GS+ E+ F +EA+ + + H L L G
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 75
Query: 871 PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIAL--GVARGLAFLHTSNMVHG 928
+ ++ +YM NG L L+E H+ + + L+ + V + +L + +H
Sbjct: 76 RPI-FIITEYMANGCLLNYLREMRHR------FQTQQLLEMCKDVCEAMEYLESKQFLHR 128
Query: 929 DIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGT---LGYVSPEAALTGETT 985
D+ +N L + +SDFGL R VG+ + + PE + + +
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRY-----VLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 183
Query: 986 KESDVYSFGIVLLELLT-GKRPV-MFTQDE 1013
+SD+++FG+++ E+ + GK P FT E
Sbjct: 184 SKSDIWAFGVLMWEIYSLGKMPYERFTNSE 213
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 19/210 (9%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870
L ++G+V + ++I+ + +GS+ E+ F +EA+ + + H L L G
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 871 PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIAL--GVARGLAFLHTSNMVHG 928
+ ++ +YM NG L L+E H+ + + L+ + V + +L + +H
Sbjct: 77 RPI-FIITEYMANGCLLNYLREMRHR------FQTQQLLEMCKDVCEAMEYLESKQFLHR 129
Query: 929 DIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGT---LGYVSPEAALTGETT 985
D+ +N L + +SDFGL R VG+ + + PE + + +
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRY-----VLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 184
Query: 986 KESDVYSFGIVLLELLT-GKRPV-MFTQDE 1013
+SD+++FG+++ E+ + GK P FT E
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYERFTNSE 214
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 19/210 (9%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870
L ++G+V + ++I+ + +GS+ E+ F +EA+ + + H L L G
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 871 PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIAL--GVARGLAFLHTSNMVHG 928
+ ++ +YM NG L L+E H+ + + L+ + V + +L + +H
Sbjct: 92 RPI-FIITEYMANGCLLNYLREMRHR------FQTQQLLEMCKDVCEAMEYLESKQFLHR 144
Query: 929 DIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGT---LGYVSPEAALTGETT 985
D+ +N L + +SDFGL R VG+ + + PE + + +
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRY-----VLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 986 KESDVYSFGIVLLELLT-GKRPV-MFTQDE 1013
+SD+++FG+++ E+ + GK P FT E
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPYERFTNSE 229
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 19/210 (9%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870
L ++G+V + ++I+ + +GS+ E+ F +EA+ + + H L L G
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 71
Query: 871 PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIAL--GVARGLAFLHTSNMVHG 928
+ ++ +YM NG L L+E H+ + + L+ + V + +L + +H
Sbjct: 72 RPI-FIITEYMANGCLLNYLREMRHR------FQTQQLLEMCKDVCEAMEYLESKQFLHR 124
Query: 929 DIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGT---LGYVSPEAALTGETT 985
D+ +N L + +SDFGL R VG+ + + PE + + +
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRY-----VLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 179
Query: 986 KESDVYSFGIVLLELLT-GKRPV-MFTQDE 1013
+SD+++FG+++ E+ + GK P FT E
Sbjct: 180 SKSDIWAFGVLMWEIYSLGKMPYERFTNSE 209
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQEASHQDGHVL 901
+E + L + RH N+ + AP + +V D M +L LL+ + H+
Sbjct: 70 REIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 127
Query: 902 NWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXX 961
+ + + RGL ++H++N++H D+KP N+L + + + DFGL R+
Sbjct: 128 YFLYQ------ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHT 181
Query: 962 XXXXXXVGTLGYVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPV 1007
V T Y +PE L + TK D++S G +L E+L+ RP+
Sbjct: 182 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPI 227
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 815 RYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGY-YAGAPDL 873
++GLV + + ++I+ + +G++ E F +EAE + K+ H L L G AP
Sbjct: 17 QFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP-- 74
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
LV+++M +G L L+ Q G + + L V G+A+L + ++H D+ +
Sbjct: 75 ICLVFEFMEHGCLSDYLRT---QRGLFAAETLLGM-CLDVCEGMAYLEEACVIHRDLAAR 130
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGT---LGYVSPEAALTGETTKESDV 990
N L + +SDFG+ R GT + + SPE + +SDV
Sbjct: 131 NCLVGENQVIKVSDFGMTRF-----VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 185
Query: 991 YSFGIVLLELLT-GKRPVMFTQDEDIVK 1017
+SFG+++ E+ + GK P + ++V+
Sbjct: 186 WSFGVLMWEVFSEGKIPYENRSNSEVVE 213
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 815 RYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGY-YAGAPDL 873
++GLV + + ++I+ + +G++ E F +EAE + K+ H L L G AP
Sbjct: 22 QFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP-- 79
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
LV+++M +G L L+ Q G + + L V G+A+L + ++H D+ +
Sbjct: 80 ICLVFEFMEHGCLSDYLRT---QRGLFAAETLLGM-CLDVCEGMAYLEEACVIHRDLAAR 135
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGT---LGYVSPEAALTGETTKESDV 990
N L + +SDFG+ R GT + + SPE + +SDV
Sbjct: 136 NCLVGENQVIKVSDFGMTRF-----VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 190
Query: 991 YSFGIVLLELLT-GKRPVMFTQDEDIVK 1017
+SFG+++ E+ + GK P + ++V+
Sbjct: 191 WSFGVLMWEVFSEGKIPYENRSNSEVVE 218
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
469
Length = 266
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 815 RYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGY-YAGAPDL 873
++GLV + + ++I+ + +G++ E F +EAE + K+ H L L G AP
Sbjct: 19 QFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP-- 76
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
LV+++M +G L L+ Q G + + L V G+A+L + ++H D+ +
Sbjct: 77 ICLVFEFMEHGCLSDYLRT---QRGLFAAETLLGM-CLDVCEGMAYLEEACVIHRDLAAR 132
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGT---LGYVSPEAALTGETTKESDV 990
N L + +SDFG+ R GT + + SPE + +SDV
Sbjct: 133 NCLVGENQVIKVSDFGMTRF-----VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 991 YSFGIVLLELLT-GKRPVMFTQDEDIVK 1017
+SFG+++ E+ + GK P + ++V+
Sbjct: 188 WSFGVLMWEVFSEGKIPYENRSNSEVVE 215
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQEASHQDGHVL 901
+E + L + RH N+ + AP + +V D M +L LL+ + H+
Sbjct: 74 REIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 131
Query: 902 NWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXX 961
+ + + RGL ++H++N++H D+KP N+L + + + DFGL R+
Sbjct: 132 YFLYQ------ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 185
Query: 962 XXXXXXVGTLGYVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPV 1007
V T Y +PE L + TK D++S G +L E+L+ RP+
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPI 231
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex
With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex
With Ch4858061 And Mgatp
Length = 307
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 91/194 (46%), Gaps = 13/194 (6%)
Query: 817 GLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYY-AGAPDLRL 875
G+VFK + ++ R+L + + + L + N + G+Y A D +
Sbjct: 20 GVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI 79
Query: 876 -LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSN-MVHGDIKPQ 933
+ ++M G+L +L++A +L +++ V +GL +L + ++H D+KP
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGK-----VSIAVIKGLTYLREKHKIMHRDVKPS 134
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N+L ++ E L DFG+ VGT Y+SPE + +SD++S
Sbjct: 135 NILVNSRGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189
Query: 994 GIVLLELLTGKRPV 1007
G+ L+E+ G+ P+
Sbjct: 190 GLSLVEMAVGRYPI 203
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHV-- 127
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 128 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 177
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQEASHQDGHVL 901
+E + L + RH N+ + AP + +V D M +L LL+ + H+
Sbjct: 74 REIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 131
Query: 902 NWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXX 961
+ + + RGL ++H++N++H D+KP N+L + + + DFGL R+
Sbjct: 132 YFLYQ------ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 185
Query: 962 XXXXXXVGTLGYVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPV 1007
V T Y +PE L + TK D++S G +L E+L+ RP+
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPI 231
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp
Length = 333
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLR 864
F++ + L G+VFK + ++ R+L + + + L + N +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 865 GYY-AGAPDLRL-LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHT 922
G+Y A D + + ++M G+L +L++A +L +++ V +GL +L
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK-----VSIAVIKGLTYLRE 122
Query: 923 SN-MVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALT 981
+ ++H D+KP N+L ++ E L DFG+ VGT Y+SPE
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPERLQG 177
Query: 982 GETTKESDVYSFGIVLLELLTGKRPV 1007
+ +SD++S G+ L+E+ G+ P+
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound
1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a And
Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 91/194 (46%), Gaps = 13/194 (6%)
Query: 817 GLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYY-AGAPDLRL 875
G+VFK + ++ R+L + + + L + N + G+Y A D +
Sbjct: 47 GVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI 106
Query: 876 -LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSN-MVHGDIKPQ 933
+ ++M G+L +L++A +L +++ V +GL +L + ++H D+KP
Sbjct: 107 SICMEHMDGGSLDQVLKKAGRIPEQILGK-----VSIAVIKGLTYLREKHKIMHRDVKPS 161
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N+L ++ E L DFG+ VGT Y+SPE + +SD++S
Sbjct: 162 NILVNSRGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 216
Query: 994 GIVLLELLTGKRPV 1007
G+ L+E+ G+ P+
Sbjct: 217 GLSLVEMAVGRYPI 230
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQEASHQDGHVL 901
+E + L + RH N+ + AP + +V D M +L LL+ + H+
Sbjct: 70 REIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 127
Query: 902 NWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXX 961
+ + + RGL ++H++N++H D+KP N+L + + + DFGL R+
Sbjct: 128 YFLYQ------ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 181
Query: 962 XXXXXXVGTLGYVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPV 1007
V T Y +PE L + TK D++S G +L E+L+ RP+
Sbjct: 182 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPI 227
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQEASHQDGHVL 901
+E + L + RH N+ + AP + +V D M +L LL+ + H+
Sbjct: 68 REIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 125
Query: 902 NWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXX 961
+ + + RGL ++H++N++H D+KP N+L + + + DFGL R+
Sbjct: 126 YFLYQ------ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 179
Query: 962 XXXXXXVGTLGYVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPV 1007
V T Y +PE L + TK D++S G +L E+L+ RP+
Sbjct: 180 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPI 225
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 91/194 (46%), Gaps = 13/194 (6%)
Query: 817 GLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYY-AGAPDLRL 875
G+VFK + ++ R+L + + + L + N + G+Y A D +
Sbjct: 20 GVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI 79
Query: 876 -LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSN-MVHGDIKPQ 933
+ ++M G+L +L++A +L +++ V +GL +L + ++H D+KP
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGK-----VSIAVIKGLTYLREKHKIMHRDVKPS 134
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N+L ++ E L DFG+ VGT Y+SPE + +SD++S
Sbjct: 135 NILVNSRGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189
Query: 994 GIVLLELLTGKRPV 1007
G+ L+E+ G+ P+
Sbjct: 190 GLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 91/194 (46%), Gaps = 13/194 (6%)
Query: 817 GLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYY-AGAPDLRL 875
G+VFK + ++ R+L + + + L + N + G+Y A D +
Sbjct: 20 GVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI 79
Query: 876 -LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSN-MVHGDIKPQ 933
+ ++M G+L +L++A +L +++ V +GL +L + ++H D+KP
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGK-----VSIAVIKGLTYLREKHKIMHRDVKPS 134
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N+L ++ E L DFG+ VGT Y+SPE + +SD++S
Sbjct: 135 NILVNSRGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189
Query: 994 GIVLLELLTGKRPV 1007
G+ L+E+ G+ P+
Sbjct: 190 GLSLVEMAVGRYPI 203
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQEASHQDGHVL 901
+E + L + RH N+ + AP + +V D M +L LL+ + H+
Sbjct: 72 REIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 129
Query: 902 NWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXX 961
+ + + RGL ++H++N++H D+KP N+L + + + DFGL R+
Sbjct: 130 YFLYQ------ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 183
Query: 962 XXXXXXVGTLGYVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPV 1007
V T Y +PE L + TK D++S G +L E+L+ RP+
Sbjct: 184 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPI 229
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212 Interactions
Length = 341
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 91/194 (46%), Gaps = 13/194 (6%)
Query: 817 GLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYY-AGAPDLRL 875
G+VFK + ++ R+L + + + L + N + G+Y A D +
Sbjct: 20 GVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI 79
Query: 876 -LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSN-MVHGDIKPQ 933
+ ++M G+L +L++A +L +++ V +GL +L + ++H D+KP
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGK-----VSIAVIKGLTYLREKHKIMHRDVKPS 134
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N+L ++ E L DFG+ VGT Y+SPE + +SD++S
Sbjct: 135 NILVNSRGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189
Query: 994 GIVLLELLTGKRPV 1007
G+ L+E+ G+ P+
Sbjct: 190 GLSLVEMAVGRYPI 203
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation
At Position 52
Length = 364
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQEASHQDGHVL 901
+E + L + RH N+ + AP + +V D M +L LL+ + H+
Sbjct: 74 REIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 131
Query: 902 NWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXX 961
+ + + RGL ++H++N++H D+KP N+L + + + DFGL R+
Sbjct: 132 YFLYQ------ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185
Query: 962 XXXXXXVGTLGYVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPV 1007
V T Y +PE L + TK D++S G +L E+L+ RP+
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPI 231
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQEASHQDGHVL 901
+E + L + RH N+ + AP + +V D M +L LL+ + H+
Sbjct: 68 REIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 125
Query: 902 NWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXX 961
+ + + RGL ++H++N++H D+KP N+L + + + DFGL R+
Sbjct: 126 YFLYQ------ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 179
Query: 962 XXXXXXVGTLGYVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPV 1007
V T Y +PE L + TK D++S G +L E+L+ RP+
Sbjct: 180 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPI 225
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQEASHQDGHVL 901
+E + L + RH N+ + AP + +V D M +L LL+ + H+
Sbjct: 75 REIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 132
Query: 902 NWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXX 961
+ + + RGL ++H++N++H D+KP N+L + + + DFGL R+
Sbjct: 133 YFLYQ------ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 186
Query: 962 XXXXXXVGTLGYVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPV 1007
V T Y +PE L + TK D++S G +L E+L+ RP+
Sbjct: 187 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPI 232
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQEASHQDGHVL 901
+E + L + RH N+ + AP + +V D M +L LL+ + H+
Sbjct: 76 REIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 133
Query: 902 NWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXX 961
+ + + RGL ++H++N++H D+KP N+L + + + DFGL R+
Sbjct: 134 YFLYQ------ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 187
Query: 962 XXXXXXVGTLGYVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPV 1007
V T Y +PE L + TK D++S G +L E+L+ RP+
Sbjct: 188 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPI 233
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQEASHQDGHVL 901
+E + L + RH N+ + AP + +V D M +L LL+ + H+
Sbjct: 67 REIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 124
Query: 902 NWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXX 961
+ + + RGL ++H++N++H D+KP N+L + + + DFGL R+
Sbjct: 125 YFLYQ------ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 178
Query: 962 XXXXXXVGTLGYVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPV 1007
V T Y +PE L + TK D++S G +L E+L+ RP+
Sbjct: 179 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPI 224
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQEASHQDGHVL 901
+E + L + RH N+ + AP + +V D M +L LL+ + H+
Sbjct: 74 REIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 131
Query: 902 NWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXX 961
+ + + RGL ++H++N++H D+KP N+L + + + DFGL R+
Sbjct: 132 YFLYQ------ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185
Query: 962 XXXXXXVGTLGYVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPV 1007
V T Y +PE L + TK D++S G +L E+L+ RP+
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPI 231
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ L +LH ++H D+KP+N+L + D ++DFG ++ VGT
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANSFVGTAQ 199
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
YVSPE +K SD+++ G ++ +L+ G P
Sbjct: 200 YVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ RGL ++H++N++H D+KP N+L + + + DFGL R+ V T
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 973 YVSPEAALTGE-TTKESDVYSFGIVLLELLTGKRPVM 1008
Y +PE L + TK D++S G +L E+L+ RP+
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIF 230
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ RGL ++H++N++H D+KP N+L + + + DFGL R+ V T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 973 YVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPV 1007
Y +PE L + TK D++S G +L E+L+ RP+
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPI 231
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 127
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 128 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 177
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 178 EMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.6 bits (148), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ RGL ++H++N++H D+KP N+L + + + DFGL R+ V T
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 973 YVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPV 1007
Y +PE L + TK D++S G +L E+L+ RP+
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPI 229
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 15/167 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQEASHQDGHVL 901
+E + L + RH N+ + AP + +V D M +L LL+ + H+
Sbjct: 74 REIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 131
Query: 902 NWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXX 961
+ + + RGL ++H++N++H D+KP N+L + + + DFGL R+
Sbjct: 132 YFLYQ------ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185
Query: 962 XXXXXXVGTLGYVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPV 1007
V T Y +PE L + TK D++S G +L E+L+ RP+
Sbjct: 186 GFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPI 231
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 15/167 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQEASHQDGHVL 901
+E + L + RH N+ + AP + +V D M +L LL+ + H+
Sbjct: 75 REIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHIC 132
Query: 902 NWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXX 961
+ + + RGL ++H++N++H D+KP N+L + + + DFGL R+
Sbjct: 133 YFLYQ------ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 186
Query: 962 XXXXXXVGTLGYVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPV 1007
V T Y +PE L + TK D++S G +L E+L+ RP+
Sbjct: 187 GFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPI 232
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 13/218 (5%)
Query: 816 YGLVFKACYND-GMVLSIRRLPDGSLDENLFRK--EAEFLGKVRHRNLTVLR----GYYA 868
+G V + + D G ++I++ +N R E + + K+ H N+ R G
Sbjct: 27 FGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQK 86
Query: 869 GAP-DLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVH 927
AP DL LL +Y G+L L + + G + P+R L++ ++ L +LH + ++H
Sbjct: 87 LAPNDLPLLAMEYCEGGDLRKYLNQFENCCG-LKEGPIRTLLS-DISSALRYLHENRIIH 144
Query: 928 GDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKE 987
D+KP+N++ + + +D VGTL Y++PE + T
Sbjct: 145 RDLKPENIVLQPGPQRLIHKI-IDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVT 203
Query: 988 SDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQK 1025
D +SFG + E +TG RP F + V+W K +K
Sbjct: 204 VDYWSFGTLAFECITGFRP--FLPNWQPVQWHGKVREK 239
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122)
Length = 677
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 13/218 (5%)
Query: 816 YGLVFKACYND-GMVLSIRRLPDGSLDENLFRK--EAEFLGKVRHRNLTVLR----GYYA 868
+G V + + D G ++I++ +N R E + + K+ H N+ R G
Sbjct: 28 FGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQK 87
Query: 869 GAP-DLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVH 927
AP DL LL +Y G+L L + + G + P+R L++ ++ L +LH + ++H
Sbjct: 88 LAPNDLPLLAMEYCEGGDLRKYLNQFENCCG-LKEGPIRTLLS-DISSALRYLHENRIIH 145
Query: 928 GDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKE 987
D+KP+N++ + + +D VGTL Y++PE + T
Sbjct: 146 RDLKPENIVLQPGPQRLIHKI-IDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVT 204
Query: 988 SDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQK 1025
D +SFG + E +TG RP F + V+W K +K
Sbjct: 205 VDYWSFGTLAFECITGFRP--FLPNWQPVQWHGKVREK 240
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870
L ++G+V + ++I+ + +GS+ E+ F +EA+ + + H L L G
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 871 PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIAL--GVARGLAFLHTSNMVHG 928
+ ++ +YM NG L L+E H+ + + L+ + V + +L + +H
Sbjct: 77 RPI-FIITEYMANGCLLNYLREMRHR------FQTQQLLEMCKDVCEAMEYLESKQFLHR 129
Query: 929 DIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKES 988
D+ +N L + +SDFGL R + + PE + + + +S
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKF--PVRWSPPEVLMYSKFSSKS 187
Query: 989 DVYSFGIVLLELLT-GKRPV-MFTQDE 1013
D+++FG+++ E+ + GK P FT E
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYERFTNSE 214
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 134
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 135 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTAD 184
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 185 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp
From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 801 ATRQFDEENVLSRTRYGLVFKA-CYNDGMVLSIRRLPDGSLDENL--------FRKEAEF 851
A + + E + + +GLV K D V++I+ L G + F++E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 852 LGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIAL 911
+ + H N+ L G P + V +++P G+L L + +H + W ++ + L
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRM---VMEFVPCGDLYHRLLDKAHP----IKWSVKLRLML 129
Query: 912 GVARGLAFLHTSN--MVHGDIKPQNVLF-----DADFEAHLSDFGLDRLXXXXXXXXXXX 964
+A G+ ++ N +VH D++ N+ +A A ++DFGL +
Sbjct: 130 DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ------QSVHSV 183
Query: 965 XXXVGTLGYVSPEAALTGET--TKESDVYSFGIVLLELLTGKRP 1006
+G +++PE E T+++D YSF ++L +LTG+ P
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 9/140 (6%)
Query: 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQN 934
V +Y+ G+L +Q H + A + GL FLH+ +V+ D+K N
Sbjct: 95 FFVMEYLNGGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDN 149
Query: 935 VLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFG 994
+L D D ++DFG+ + GT Y++PE L + D +SFG
Sbjct: 150 ILLDKDGHIKIADFGMCK---ENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFG 206
Query: 995 IVLLELLTGKRPVMFTQDED 1014
++L E+L G+ P QDE+
Sbjct: 207 VLLYEMLIGQSP-FHGQDEE 225
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With A
Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHV-- 127
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 128 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCR------HTDD 177
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 127
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 128 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 177
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine
At 2a Resolution
Length = 345
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 9/140 (6%)
Query: 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQN 934
V +Y+ G+L +Q H + A + GL FLH+ +V+ D+K N
Sbjct: 94 FFVMEYLNGGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDN 148
Query: 935 VLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFG 994
+L D D ++DFG+ + GT Y++PE L + D +SFG
Sbjct: 149 ILLDKDGHIKIADFGMCK---ENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFG 205
Query: 995 IVLLELLTGKRPVMFTQDED 1014
++L E+L G+ P QDE+
Sbjct: 206 VLLYEMLIGQSP-FHGQDEE 224
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 127
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 128 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 177
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 127
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 128 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 177
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 909 IALGVARGLAFLHTSNMVHGDIKPQNVLFDA---DFEAHLSDFGLDRLXXXXXXXXXXXX 965
I V G+ ++H N+VH D+KP+N+L ++ D + + DFGL
Sbjct: 126 IIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGL----STCFQQNTKMK 181
Query: 966 XXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
+GT Y++PE L G ++ DV+S G++L LL+G P + DI+K V+
Sbjct: 182 DRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVE 235
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 127
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 128 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 177
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 134
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 135 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTAD 184
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 185 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 132
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 133 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR------HTDD 182
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 183 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating
Mutant
Length = 367
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 134
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 135 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTAD 184
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 185 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 132
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 133 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR------HTDD 182
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 183 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino Quinoline
Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 127
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 128 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 177
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 91/194 (46%), Gaps = 13/194 (6%)
Query: 817 GLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYY-AGAPDLRL 875
G+VFK + ++ R+L + + + L + N + G+Y A D +
Sbjct: 39 GVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI 98
Query: 876 -LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSN-MVHGDIKPQ 933
+ ++M G+L +L++A +L +++ V +GL +L + ++H D+KP
Sbjct: 99 SICMEHMDGGSLDQVLKKAGRIPEQILGK-----VSIAVIKGLTYLREKHKIMHRDVKPS 153
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N+L ++ E L DFG+ VGT Y+SPE + +SD++S
Sbjct: 154 NILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 208
Query: 994 GIVLLELLTGKRPV 1007
G+ L+E+ G+ P+
Sbjct: 209 GLSLVEMAVGRYPI 222
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 127
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 128 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 177
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 129
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 130 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 179
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 180 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 129
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 130 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 179
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 180 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 132
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 133 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 182
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 183 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 69 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 126
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 127 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 176
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 177 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 134
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 135 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 184
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 185 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 127
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 128 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 177
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 178 EMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 139
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 140 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 189
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 190 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide Substituted
Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 127
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 128 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 177
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 124
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 125 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 174
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 175 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 139
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 140 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 189
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 190 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 68 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 125
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 126 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 175
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 176 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 8/111 (7%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDA---DFEAHLSDFGLDRLXXXXXXXXXXXXXXVG 969
V G+ ++H N+VH D+KP+N+L ++ D + + DFGL +G
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS----TCFQQNTKMKDRIG 185
Query: 970 TLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
T Y++PE L G ++ DV+S G++L LL+G P + DI+K V+
Sbjct: 186 TAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVE 235
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 138
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 139 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR------HTDD 188
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 189 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 8/111 (7%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDA---DFEAHLSDFGLDRLXXXXXXXXXXXXXXVG 969
V G+ ++H N+VH D+KP+N+L ++ D + + DFGL +G
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS----TCFQQNTKMKDRIG 185
Query: 970 TLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
T Y++PE L G ++ DV+S G++L LL+G P + DI+K V+
Sbjct: 186 TAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVE 235
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 139
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 140 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 189
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 190 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
Length = 349
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 124
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 125 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 174
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 175 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 123
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 124 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 173
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 174 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 132
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 133 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 182
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 183 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 123
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 124 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 173
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 174 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into
Receptor Autoregulation
Length = 343
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 24/197 (12%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYA-GAPDLRLLVYDYMPNGNLGTLLQEAS--------H 895
F++EA + + + N+ L G A G P L+++YM G+L L+ S H
Sbjct: 97 FQREAALMAEFDNPNIVKLLGVCAVGKP--MCLLFEYMAYGDLNEFLRSMSPHTVCSLSH 154
Query: 896 QDGHV-----------LNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAH 944
D L+ + IA VA G+A+L VH D+ +N L +
Sbjct: 155 SDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVK 214
Query: 945 LSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-G 1003
++DFGL R + + ++ PE+ T ESDV+++G+VL E+ + G
Sbjct: 215 IADFGLSRNIYSADYYKADGNDAI-PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYG 273
Query: 1004 KRPVMFTQDEDIVKWVK 1020
+P E+++ +V+
Sbjct: 274 LQPYYGMAHEEVIYYVR 290
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 115/271 (42%), Gaps = 27/271 (9%)
Query: 830 LSIRRLPD--GSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLG 887
++++ LP+ DE F EA + K+ H+N+ G + R ++ + M G+L
Sbjct: 78 VAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLP-RFILLELMAGGDLK 136
Query: 888 TLLQEASHQDGHVLNWPMRHL--IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFE--- 942
+ L+E + + M L +A +A G +L ++ +H DI +N L
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 196
Query: 943 AHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
A + DFG+ R + + ++ PEA + G T ++D +SFG++L E+ +
Sbjct: 197 AKIGDFGMARDIYRASYYRKGGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
Query: 1003 -GKRPVMFTQDEDIVKWVKKQLQKGQITXXXXXXXXXXXXXXXXWEEFLLGVKVALLCTA 1061
G P +++++++V G++ W+
Sbjct: 256 LGYMPYPSKSNQEVLEFVTS---GGRMDPPKNCPGPVYRIMTQCWQH------------- 299
Query: 1062 PDPIDRPTMSDIVFMLEGCRVGPDIPSSADP 1092
P DRP + I+ +E C PD+ ++A P
Sbjct: 300 -QPEDRPNFAIILERIEYCTQDPDVINTALP 329
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And
Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation And
Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And
Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation And
Specifity Of A Ste20p Map3k
Length = 348
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMR 906
KE FL K+RH N RG Y LV +Y G+ LL+ V P++
Sbjct: 103 KEVRFLQKLRHPNTIQYRGCYL-REHTAWLVMEYCL-GSASDLLE--------VHKKPLQ 152
Query: 907 HL----IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + G +GLA+LH+ NM+H D+K N+L L DFG
Sbjct: 153 EVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFG-------SASIMA 205
Query: 963 XXXXXVGTLGYVSPEAALT---GETTKESDVYSFGIVLLELLTGKRPV 1007
VGT +++PE L G+ + DV+S GI +EL K P+
Sbjct: 206 PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking
Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking
Site On Its Activator Mkk3b
Length = 360
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 127
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 128 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 177
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2-
Carboxamide Inhibitor
Length = 371
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 138
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 139 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 188
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 189 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 129
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 130 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 179
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 180 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydropyrido-
Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 133
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 134 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 183
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 150
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 151 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 200
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 201 EMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 146
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 147 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 196
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 197 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 150
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 151 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 200
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 201 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 147
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 148 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 197
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 198 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 80 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 137
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 138 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 187
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 188 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 54/184 (29%), Positives = 74/184 (40%), Gaps = 27/184 (14%)
Query: 847 KEAEFLGKVR-HRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPM 905
KE + L KV H N+ L+ Y LV+D M G L L E M
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYE-TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 906 RHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXX 965
R L+ + A LH N+VH D+KP+N+L D D L+DFG
Sbjct: 131 RALLEVICA-----LHKLNIVHRDLKPENILLDDDMNIKLTDFGFS----CQLDPGEKLR 181
Query: 966 XXVGTLGYVSPEAALTGETT------KESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWV 1019
GT Y++PE KE D++S G+++ LL G P W
Sbjct: 182 SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF----------WH 231
Query: 1020 KKQL 1023
+KQ+
Sbjct: 232 RKQM 235
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 75/169 (44%), Gaps = 24/169 (14%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMR 906
KE FL K+RH N RG Y LV +Y G+ LL+ V P++
Sbjct: 64 KEVRFLQKLRHPNTIQYRGCYL-REHTAWLVMEYCL-GSASDLLE--------VHKKPLQ 113
Query: 907 HL----IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + G +GLA+LH+ NM+H D+K N+L L DFG
Sbjct: 114 EVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFG-------SASIMA 166
Query: 963 XXXXXVGTLGYVSPEAALT---GETTKESDVYSFGIVLLELLTGKRPVM 1008
VGT +++PE L G+ + DV+S GI +EL K P+
Sbjct: 167 PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 215
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ L +LH ++H D+KP+N+L + D ++DFG ++ VGT
Sbjct: 138 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANSFVGTAQ 196
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
YVSPE K SD+++ G ++ +L+ G P
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase-
1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine
Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ L +LH ++H D+KP+N+L + D ++DFG ++ VGT
Sbjct: 142 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANSFVGTAQ 200
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
YVSPE K SD+++ G ++ +L+ G P
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking
Partner
Length = 380
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 147
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 148 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 197
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 198 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 123
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 124 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 173
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 174 EMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 114/271 (42%), Gaps = 27/271 (9%)
Query: 830 LSIRRLPD--GSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLG 887
++++ LP+ DE F EA + K H+N+ G + R ++ + M G+L
Sbjct: 63 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP-RFILMELMAGGDLK 121
Query: 888 TLLQEASHQDGHVLNWPMRHL--IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFE--- 942
+ L+E + + M L +A +A G +L ++ +H DI +N L
Sbjct: 122 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 181
Query: 943 AHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
A + DFG+ R + + ++ PEA + G T ++D +SFG++L E+ +
Sbjct: 182 AKIGDFGMARDIYRASYYRKGGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
Query: 1003 -GKRPVMFTQDEDIVKWVKKQLQKGQITXXXXXXXXXXXXXXXXWEEFLLGVKVALLCTA 1061
G P +++++++V G++ W+
Sbjct: 241 LGYMPYPSKSNQEVLEFVTS---GGRMDPPKNCPGPVYRIMTQCWQH------------- 284
Query: 1062 PDPIDRPTMSDIVFMLEGCRVGPDIPSSADP 1092
P DRP + I+ +E C PD+ ++A P
Sbjct: 285 -QPEDRPNFAIILERIEYCTQDPDVINTALP 314
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ L +LH ++H D+KP+N+L + D ++DFG ++ VGT
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANAFVGTAQ 197
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
YVSPE K SD+++ G ++ +L+ G P
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 82/197 (41%), Gaps = 13/197 (6%)
Query: 810 VLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAG 869
+L+R + VF A VL + + ++++ + L V+H L L +
Sbjct: 55 LLARHKAEEVFYAV----KVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT 110
Query: 870 APDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGD 929
A D V DY+ G L LQ P A +A L +LH+ N+V+ D
Sbjct: 111 A-DKLYFVLDYINGGELFYHLQRER-----CFLEPRARFYAAEIASALGYLHSLNIVYRD 164
Query: 930 IKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESD 989
+KP+N+L D+ L+DFGL + GT Y++PE + D
Sbjct: 165 LKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVD 221
Query: 990 VYSFGIVLLELLTGKRP 1006
+ G VL E+L G P
Sbjct: 222 WWCLGAVLYEMLYGLPP 238
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 114/271 (42%), Gaps = 27/271 (9%)
Query: 830 LSIRRLPD--GSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLG 887
++++ LP+ DE F EA + K H+N+ G + R ++ + M G+L
Sbjct: 55 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP-RFILLELMAGGDLK 113
Query: 888 TLLQEASHQDGHVLNWPMRHL--IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFE--- 942
+ L+E + + M L +A +A G +L ++ +H DI +N L
Sbjct: 114 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 173
Query: 943 AHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
A + DFG+ R + + ++ PEA + G T ++D +SFG++L E+ +
Sbjct: 174 AKIGDFGMARDIYRASYYRKGGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
Query: 1003 -GKRPVMFTQDEDIVKWVKKQLQKGQITXXXXXXXXXXXXXXXXWEEFLLGVKVALLCTA 1061
G P +++++++V G++ W+
Sbjct: 233 LGYMPYPSKSNQEVLEFVTS---GGRMDPPKNCPGPVYRIMTQCWQH------------- 276
Query: 1062 PDPIDRPTMSDIVFMLEGCRVGPDIPSSADP 1092
P DRP + I+ +E C PD+ ++A P
Sbjct: 277 -QPEDRPNFAIILERIEYCTQDPDVINTALP 306
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In
Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 127
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 128 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 177
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 178 EMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 129
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 130 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR------HTDD 179
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 180 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 127
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 128 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 177
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 178 EMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex
With Crizotinib (Pf-02341066)
Length = 327
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 114/271 (42%), Gaps = 27/271 (9%)
Query: 830 LSIRRLPD--GSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLG 887
++++ LP+ DE F EA + K H+N+ G + R ++ + M G+L
Sbjct: 63 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP-RFILLELMAGGDLK 121
Query: 888 TLLQEASHQDGHVLNWPMRHL--IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFE--- 942
+ L+E + + M L +A +A G +L ++ +H DI +N L
Sbjct: 122 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 181
Query: 943 AHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
A + DFG+ R + + ++ PEA + G T ++D +SFG++L E+ +
Sbjct: 182 AKIGDFGMARDIYRASYYRKGGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
Query: 1003 -GKRPVMFTQDEDIVKWVKKQLQKGQITXXXXXXXXXXXXXXXXWEEFLLGVKVALLCTA 1061
G P +++++++V G++ W+
Sbjct: 241 LGYMPYPSKSNQEVLEFVTS---GGRMDPPKNCPGPVYRIMTQCWQH------------- 284
Query: 1062 PDPIDRPTMSDIVFMLEGCRVGPDIPSSADP 1092
P DRP + I+ +E C PD+ ++A P
Sbjct: 285 -QPEDRPNFAIILERIEYCTQDPDVINTALP 314
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 146
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 147 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 196
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 197 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 103/226 (45%), Gaps = 10/226 (4%)
Query: 799 VEATRQFDEENVLSRTRYGLVFKAC-YNDGMVLSIRRLPDGSLD--ENLFRKEAEFLGKV 855
+ ++ QF + L Y V+K G+ ++++ + S + + +E + ++
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 856 RHRNLTVLRGYYAGAPDLRL-LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVA 914
+H N ++R Y + +L LV+++M N + L + +
Sbjct: 61 KHEN--IVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 915 RGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
+GLAF H + ++H D+KPQN+L + + L DFGL R V TL Y
Sbjct: 119 QGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLAR---AFGIPVNTFSSEVVTLWYR 175
Query: 975 SPEAALTGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDIVKWV 1019
+P+ + T S D++S G +L E++TGK T DE+ +K +
Sbjct: 176 APDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 133
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 134 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR------HTDD 183
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Compound
Ps182 Bound To The Pif-Pocket
Length = 311
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ L +LH ++H D+KP+N+L + D ++DFG ++ VGT
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQ 199
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
YVSPE K SD+++ G ++ +L+ G P
Sbjct: 200 YVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 114/271 (42%), Gaps = 27/271 (9%)
Query: 830 LSIRRLPD--GSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLG 887
++++ LP+ DE F EA + K H+N+ G + R ++ + M G+L
Sbjct: 78 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP-RFILMELMAGGDLK 136
Query: 888 TLLQEASHQDGHVLNWPMRHL--IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFE--- 942
+ L+E + + M L +A +A G +L ++ +H DI +N L
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 196
Query: 943 AHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
A + DFG+ R + + ++ PEA + G T ++D +SFG++L E+ +
Sbjct: 197 AKIGDFGMARDIYRASYYRKGGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
Query: 1003 -GKRPVMFTQDEDIVKWVKKQLQKGQITXXXXXXXXXXXXXXXXWEEFLLGVKVALLCTA 1061
G P +++++++V G++ W+
Sbjct: 256 LGYMPYPSKSNQEVLEFVTS---GGRMDPPKNCPGPVYRIMTQCWQH------------- 299
Query: 1062 PDPIDRPTMSDIVFMLEGCRVGPDIPSSADP 1092
P DRP + I+ +E C PD+ ++A P
Sbjct: 300 -QPEDRPNFAIILERIEYCTQDPDVINTALP 329
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 115/271 (42%), Gaps = 27/271 (9%)
Query: 830 LSIRRLPD--GSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLG 887
++++ LP+ DE F EA + K+ H+N+ G + R ++ + M G+L
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLP-RFILLELMAGGDLK 122
Query: 888 TLLQEASHQDGHVLNWPMRHL--IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFE--- 942
+ L+E + + M L +A +A G +L ++ +H DI +N L
Sbjct: 123 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 182
Query: 943 AHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
A + DFG+ R + + ++ PEA + G T ++D +SFG++L E+ +
Sbjct: 183 AKIGDFGMARDIYRASYYRKGGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
Query: 1003 -GKRPVMFTQDEDIVKWVKKQLQKGQITXXXXXXXXXXXXXXXXWEEFLLGVKVALLCTA 1061
G P +++++++V G++ W+
Sbjct: 242 LGYMPYPSKSNQEVLEFVTS---GGRMDPPKNCPGPVYRIMTQCWQH------------- 285
Query: 1062 PDPIDRPTMSDIVFMLEGCRVGPDIPSSADP 1092
P DRP + I+ +E C PD+ ++A P
Sbjct: 286 -QPEDRPNFAIILERIEYCTQDPDVINTALP 315
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 147
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 148 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 197
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 198 EMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 54/184 (29%), Positives = 74/184 (40%), Gaps = 27/184 (14%)
Query: 847 KEAEFLGKVR-HRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPM 905
KE + L KV H N+ L+ Y LV+D M G L L E M
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYE-TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 906 RHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXX 965
R L+ + A LH N+VH D+KP+N+L D D L+DFG
Sbjct: 131 RALLEVICA-----LHKLNIVHRDLKPENILLDDDMNIKLTDFGFS----CQLDPGEKLR 181
Query: 966 XXVGTLGYVSPEAALTGETT------KESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWV 1019
GT Y++PE KE D++S G+++ LL G P W
Sbjct: 182 EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF----------WH 231
Query: 1020 KKQL 1023
+KQ+
Sbjct: 232 RKQM 235
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 54/184 (29%), Positives = 74/184 (40%), Gaps = 27/184 (14%)
Query: 847 KEAEFLGKVR-HRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPM 905
KE + L KV H N+ L+ Y LV+D M G L L E M
Sbjct: 59 KEVDILRKVSGHPNIIQLKDTYE-TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 117
Query: 906 RHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXX 965
R L+ + A LH N+VH D+KP+N+L D D L+DFG
Sbjct: 118 RALLEVICA-----LHKLNIVHRDLKPENILLDDDMNIKLTDFGFS----CQLDPGEKLR 168
Query: 966 XXVGTLGYVSPEAALTGETT------KESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWV 1019
GT Y++PE KE D++S G+++ LL G P W
Sbjct: 169 EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF----------WH 218
Query: 1020 KKQL 1023
+KQ+
Sbjct: 219 RKQM 222
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition By
Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition By
Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A Taxol-
Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A Taxol-
Induced Checkpoint Sensitivity Screen
Length = 284
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 18/208 (8%)
Query: 805 FDEENVLSRTRYGLVFKAC-YNDGMVLSIRRLPDGSLD----ENLFRKEAEFLGKVRHRN 859
FD L + ++G V+ A + +++++ L L+ E+ R+E E +RH N
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 860 LTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAF 919
+ + Y+ + L++ ++ P G L LQ+ D M L A L +
Sbjct: 76 ILRMYNYFHDRKRIYLML-EFAPRGELYKELQKHGRFDEQRSATFMEEL-----ADALHY 129
Query: 920 LHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAA 979
H ++H DIKP+N+L E ++DFG GTL Y+ PE
Sbjct: 130 CHERKVIHRDIKPENLLMGYKGELKIADFGWS-----VHAPSLRRRXMCGTLDYLPPE-M 183
Query: 980 LTGETTKES-DVYSFGIVLLELLTGKRP 1006
+ G+T E D++ G++ E L G P
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 64/250 (25%), Positives = 111/250 (44%), Gaps = 29/250 (11%)
Query: 781 NGGPKLVMFNNKITLAETVEATRQFDEEN-----VLSRTRYGLVFK----ACYNDGMVLS 831
+GG +L+ +++ A + EN VL YG VF + ++ G + +
Sbjct: 27 DGGEQLLTVKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYA 86
Query: 832 IRRLPDGSLDENL-----FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL-LVYDYMPNGN 885
++ L ++ + R E + L +R V +YA + +L L+ DY+ G
Sbjct: 87 MKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTL-HYAFQTETKLHLILDYINGGE 145
Query: 886 LGTLLQEASHQDGHVLNWPMRHLIALG-VARGLAFLHTSNMVHGDIKPQNVLFDADFEAH 944
L T L + H + I +G + L LH +++ DIK +N+L D++
Sbjct: 146 LFTHLSQRERFTEHEVQ------IYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVV 199
Query: 945 LSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGET--TKESDVYSFGIVLLELLT 1002
L+DFGL + GT+ Y++P+ G++ K D +S G+++ ELLT
Sbjct: 200 LTDFGLSK--EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT 257
Query: 1003 GKRPVMFTQD 1012
G P FT D
Sbjct: 258 GASP--FTVD 265
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind
E804
Length = 324
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 11/162 (6%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMR 906
+E L ++H N+ L L L V++Y+ + +L L + G+++N
Sbjct: 49 REVSLLKDLKHANIVTLHDIIHTEKSLTL-VFEYL-DKDLKQYLDDC----GNIINMHNV 102
Query: 907 HLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXX 966
L + RGLA+ H ++H D+KPQN+L + E L+DFGL R
Sbjct: 103 KLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLAR---AKSIPTKTYDN 159
Query: 967 XVGTLGYVSPEAAL-TGETTKESDVYSFGIVLLELLTGKRPV 1007
V TL Y P+ L + + + + D++ G + E+ TG RP+
Sbjct: 160 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATG-RPL 200
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 18/208 (8%)
Query: 805 FDEENVLSRTRYGLVFKAC-YNDGMVLSIRRLPDGSLD----ENLFRKEAEFLGKVRHRN 859
FD L + ++G V+ A + +++++ L L+ E+ R+E E +RH N
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 76
Query: 860 LTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAF 919
+ + Y+ + L++ ++ P G L LQ+ D M L A L +
Sbjct: 77 ILRMYNYFHDRKRIYLML-EFAPRGELYKELQKHGRFDEQRSATFMEEL-----ADALHY 130
Query: 920 LHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAA 979
H ++H DIKP+N+L E ++DFG GTL Y+ PE
Sbjct: 131 CHERKVIHRDIKPENLLMGYKGELKIADFGWS-----VHAPSLRRRXMCGTLDYLPPE-M 184
Query: 980 LTGETTKES-DVYSFGIVLLELLTGKRP 1006
+ G+T E D++ G++ E L G P
Sbjct: 185 IEGKTHDEKVDLWCAGVLCYEFLVGMPP 212
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide Complex
Length = 286
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ L +LH ++H D+KP+N+L + D ++DFG ++ VGT
Sbjct: 116 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQ 174
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
YVSPE K SD+++ G ++ +L+ G P
Sbjct: 175 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ucn-01
Length = 310
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ L +LH ++H D+KP+N+L + D ++DFG ++ VGT
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQ 197
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
YVSPE K SD+++ G ++ +L+ G P
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ L +LH ++H D+KP+N+L + D ++DFG ++ VGT
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQ 199
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
YVSPE K SD+++ G ++ +L+ G P
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ L +LH ++H D+KP+N+L + D ++DFG ++ VGT
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQ 199
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
YVSPE K SD+++ G ++ +L+ G P
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ L +LH ++H D+KP+N+L + D ++DFG ++ VGT
Sbjct: 123 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQ 181
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
YVSPE K SD+++ G ++ +L+ G P
Sbjct: 182 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ L +LH ++H D+KP+N+L + D ++DFG ++ VGT
Sbjct: 144 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQ 202
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
YVSPE K SD+++ G ++ +L+ G P
Sbjct: 203 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
Js30
Length = 316
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ L +LH ++H D+KP+N+L + D ++DFG ++ VGT
Sbjct: 146 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQ 204
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
YVSPE K SD+++ G ++ +L+ G P
Sbjct: 205 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ L +LH ++H D+KP+N+L + D ++DFG ++ VGT
Sbjct: 138 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQ 196
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
YVSPE K SD+++ G ++ +L+ G P
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ L +LH ++H D+KP+N+L + D ++DFG ++ VGT
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQ 197
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
YVSPE K SD+++ G ++ +L+ G P
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ L +LH ++H D+KP+N+L + D ++DFG ++ VGT
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQ 197
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
YVSPE K SD+++ G ++ +L+ G P
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ L +LH ++H D+KP+N+L + D ++DFG ++ VGT
Sbjct: 142 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQ 200
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
YVSPE K SD+++ G ++ +L+ G P
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In
Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Compound
Ps210 Bound To The Pif-Pocket
Length = 311
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ L +LH ++H D+KP+N+L + D ++DFG ++ VGT
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQ 199
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
YVSPE K SD+++ G ++ +L+ G P
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ L +LH ++H D+KP+N+L + D ++DFG ++ VGT
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQ 199
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
YVSPE K SD+++ G ++ +L+ G P
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3
Length = 286
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ L +LH ++H D+KP+N+L + D ++DFG ++ VGT
Sbjct: 118 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQ 176
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
YVSPE K SD+++ G ++ +L+ G P
Sbjct: 177 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-8
Length = 289
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ L +LH ++H D+KP+N+L + D ++DFG ++ VGT
Sbjct: 119 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQ 177
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
YVSPE K SD+++ G ++ +L+ G P
Sbjct: 178 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ L +LH ++H D+KP+N+L + D ++DFG ++ VGT
Sbjct: 117 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQ 175
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
YVSPE K SD+++ G ++ +L+ G P
Sbjct: 176 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase
In Complex With Ch5424802
Length = 344
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 114/271 (42%), Gaps = 27/271 (9%)
Query: 830 LSIRRLPD--GSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLG 887
++++ LP+ DE F EA + K H+N+ G + R ++ + M G+L
Sbjct: 80 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP-RFILLELMAGGDLK 138
Query: 888 TLLQEASHQDGHVLNWPMRHL--IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFE--- 942
+ L+E + + M L +A +A G +L ++ +H DI +N L
Sbjct: 139 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 198
Query: 943 AHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
A + DFG+ R + + ++ PEA + G T ++D +SFG++L E+ +
Sbjct: 199 AKIGDFGMARDIYRASYYRKGGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
Query: 1003 -GKRPVMFTQDEDIVKWVKKQLQKGQITXXXXXXXXXXXXXXXXWEEFLLGVKVALLCTA 1061
G P +++++++V G++ W+
Sbjct: 258 LGYMPYPSKSNQEVLEFVTS---GGRMDPPKNCPGPVYRIMTQCWQH------------- 301
Query: 1062 PDPIDRPTMSDIVFMLEGCRVGPDIPSSADP 1092
P DRP + I+ +E C PD+ ++A P
Sbjct: 302 -QPEDRPNFAIILERIEYCTQDPDVINTALP 331
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs
Length = 301
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 13/193 (6%)
Query: 817 GLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYY-AGAPDLRL 875
G+VFK + ++ R+L + + + L + N + G+Y A D +
Sbjct: 23 GVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI 82
Query: 876 -LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSN-MVHGDIKPQ 933
+ ++M G+L +L++A +L +++ V +GL +L + ++H D+KP
Sbjct: 83 SICMEHMDGGSLDQVLKKAGRIPEQILGK-----VSIAVIKGLTYLREKHKIMHRDVKPS 137
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
N+L ++ E L DFG+ VGT Y+SPE + +SD++S
Sbjct: 138 NILVNSRGEIKLCDFGVS-----GQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSM 192
Query: 994 GIVLLELLTGKRP 1006
G+ L+E+ G+ P
Sbjct: 193 GLSLVEMAVGRYP 205
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 18/208 (8%)
Query: 805 FDEENVLSRTRYGLVFKAC-YNDGMVLSIRRLPDGSLD----ENLFRKEAEFLGKVRHRN 859
FD L + ++G V+ A + +++++ L L+ E+ R+E E +RH N
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 860 LTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAF 919
+ + Y+ + L++ ++ P G L LQ+ D M L A L +
Sbjct: 76 ILRMYNYFHDRKRIYLML-EFAPRGELYKELQKHGRFDEQRSATFMEEL-----ADALHY 129
Query: 920 LHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAA 979
H ++H DIKP+N+L E ++DFG GTL Y+ PE
Sbjct: 130 CHERKVIHRDIKPENLLMGYKGELKIADFGWS-----VHAPSLRRRXMCGTLDYLPPE-M 183
Query: 980 LTGETTKES-DVYSFGIVLLELLTGKRP 1006
+ G+T E D++ G++ E L G P
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 915 RGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
RGL FLH+ +VH D+KPQN+L + + L+DFGL R+ V TL Y
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI----YSFQMALTSVVVTLWYR 186
Query: 975 SPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+PE L D++S G + E+ +R +F D+
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMF--RRKPLFRGSSDV 225
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent Kinase
6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 915 RGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
RGL FLH+ +VH D+KPQN+L + + L+DFGL R+ V TL Y
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI----YSFQMALTSVVVTLWYR 186
Query: 975 SPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+PE L D++S G + E+ +R +F D+
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMF--RRKPLFRGSSDV 225
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 114/271 (42%), Gaps = 27/271 (9%)
Query: 830 LSIRRLPD--GSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLG 887
++++ LP+ DE F EA + K H+N+ G + R ++ + M G+L
Sbjct: 70 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP-RFILLELMAGGDLK 128
Query: 888 TLLQEASHQDGHVLNWPMRHL--IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFE--- 942
+ L+E + + M L +A +A G +L ++ +H DI +N L
Sbjct: 129 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 188
Query: 943 AHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
A + DFG+ R + + ++ PEA + G T ++D +SFG++L E+ +
Sbjct: 189 AKIGDFGMARDIYRASYYRKGGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
Query: 1003 -GKRPVMFTQDEDIVKWVKKQLQKGQITXXXXXXXXXXXXXXXXWEEFLLGVKVALLCTA 1061
G P +++++++V G++ W+
Sbjct: 248 LGYMPYPSKSNQEVLEFVTS---GGRMDPPKNCPGPVYRIMTQCWQH------------- 291
Query: 1062 PDPIDRPTMSDIVFMLEGCRVGPDIPSSADP 1092
P DRP + I+ +E C PD+ ++A P
Sbjct: 292 -QPEDRPNFAIILERIEYCTQDPDVINTALP 321
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 114/271 (42%), Gaps = 27/271 (9%)
Query: 830 LSIRRLPD--GSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLG 887
++++ LP+ DE F EA + K H+N+ G + R ++ + M G+L
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP-RFILLELMAGGDLK 122
Query: 888 TLLQEASHQDGHVLNWPMRHL--IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFE--- 942
+ L+E + + M L +A +A G +L ++ +H DI +N L
Sbjct: 123 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 182
Query: 943 AHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
A + DFG+ R + + ++ PEA + G T ++D +SFG++L E+ +
Sbjct: 183 AKIGDFGMARDIYRASYYRKGGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
Query: 1003 -GKRPVMFTQDEDIVKWVKKQLQKGQITXXXXXXXXXXXXXXXXWEEFLLGVKVALLCTA 1061
G P +++++++V G++ W+
Sbjct: 242 LGYMPYPSKSNQEVLEFVTS---GGRMDPPKNCPGPVYRIMTQCWQH------------- 285
Query: 1062 PDPIDRPTMSDIVFMLEGCRVGPDIPSSADP 1092
P DRP + I+ +E C PD+ ++A P
Sbjct: 286 -QPEDRPNFAIILERIEYCTQDPDVINTALP 315
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With
Imidazo[1,5-A]quinoxaline
Length = 267
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 815 RYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGY-YAGAPDL 873
++GLV + + ++I+ + +G++ E F +EAE + K+ H L L G AP
Sbjct: 20 QFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP-- 77
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
LV ++M +G L L+ Q G + + L V G+A+L + ++H D+ +
Sbjct: 78 ICLVTEFMEHGCLSDYLRT---QRGLFAAETLLGM-CLDVCEGMAYLEEACVIHRDLAAR 133
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGT---LGYVSPEAALTGETTKESDV 990
N L + +SDFG+ R GT + + SPE + +SDV
Sbjct: 134 NCLVGENQVIKVSDFGMTRF-----VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 188
Query: 991 YSFGIVLLELLT-GKRPVMFTQDEDIVK 1017
+SFG+++ E+ + GK P + ++V+
Sbjct: 189 WSFGVLMWEVFSEGKIPYENRSNSEVVE 216
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 127
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + D+GL R
Sbjct: 128 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR------HTDD 177
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 114/271 (42%), Gaps = 27/271 (9%)
Query: 830 LSIRRLPD--GSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLG 887
++++ LP+ DE F EA + K H+N+ G + R ++ + M G+L
Sbjct: 81 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP-RFILLELMAGGDLK 139
Query: 888 TLLQEASHQDGHVLNWPMRHL--IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFE--- 942
+ L+E + + M L +A +A G +L ++ +H DI +N L
Sbjct: 140 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 199
Query: 943 AHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
A + DFG+ R + + ++ PEA + G T ++D +SFG++L E+ +
Sbjct: 200 AKIGDFGMARDIYRAGYYRKGGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
Query: 1003 -GKRPVMFTQDEDIVKWVKKQLQKGQITXXXXXXXXXXXXXXXXWEEFLLGVKVALLCTA 1061
G P +++++++V G++ W+
Sbjct: 259 LGYMPYPSKSNQEVLEFVTS---GGRMDPPKNCPGPVYRIMTQCWQH------------- 302
Query: 1062 PDPIDRPTMSDIVFMLEGCRVGPDIPSSADP 1092
P DRP + I+ +E C PD+ ++A P
Sbjct: 303 -QPEDRPNFAIILERIEYCTQDPDVINTALP 332
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 114/271 (42%), Gaps = 27/271 (9%)
Query: 830 LSIRRLPD--GSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLG 887
++++ LP+ DE F EA + K H+N+ G + R ++ + M G+L
Sbjct: 104 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP-RFILLELMAGGDLK 162
Query: 888 TLLQEASHQDGHVLNWPMRHL--IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFE--- 942
+ L+E + + M L +A +A G +L ++ +H DI +N L
Sbjct: 163 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 222
Query: 943 AHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
A + DFG+ R + + ++ PEA + G T ++D +SFG++L E+ +
Sbjct: 223 AKIGDFGMARDIYRAGYYRKGGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
Query: 1003 -GKRPVMFTQDEDIVKWVKKQLQKGQITXXXXXXXXXXXXXXXXWEEFLLGVKVALLCTA 1061
G P +++++++V G++ W+
Sbjct: 282 LGYMPYPSKSNQEVLEFVTS---GGRMDPPKNCPGPVYRIMTQCWQH------------- 325
Query: 1062 PDPIDRPTMSDIVFMLEGCRVGPDIPSSADP 1092
P DRP + I+ +E C PD+ ++A P
Sbjct: 326 -QPEDRPNFAIILERIEYCTQDPDVINTALP 355
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 14/213 (6%)
Query: 798 TVEATRQFDEENVLSRTRYGLVFKACY---NDGM--VLSIRRLPDGSLDE--NLFRKEAE 850
TV R + L +G V CY NDG +++++ L +G + + +++E E
Sbjct: 3 TVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIE 62
Query: 851 FLGKVRHRNLTVLRGYYAGAPDLRL-LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLI 909
L + H ++ +G + + LV +Y+P G+L L H + L
Sbjct: 63 ILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR------HCVGLAQLLLF 116
Query: 910 ALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVG 969
A + G+A+LH + +H + +NVL D D + DFGL +
Sbjct: 117 AQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDS 176
Query: 970 TLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +PE + SDV+SFG+ L ELLT
Sbjct: 177 PVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 14/213 (6%)
Query: 798 TVEATRQFDEENVLSRTRYGLVFKACY---NDGM--VLSIRRLPDGSLDE--NLFRKEAE 850
TV R + L +G V CY NDG +++++ L +G + + +++E E
Sbjct: 4 TVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIE 63
Query: 851 FLGKVRHRNLTVLRGYYAGAPDLRL-LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLI 909
L + H ++ +G + + LV +Y+P G+L L H + L
Sbjct: 64 ILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR------HCVGLAQLLLF 117
Query: 910 ALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVG 969
A + G+A+LH + +H + +NVL D D + DFGL +
Sbjct: 118 AQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDS 177
Query: 970 TLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +PE + SDV+SFG+ L ELLT
Sbjct: 178 PVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 8/116 (6%)
Query: 909 IALGVARGLAFLHTSNMVHGDIKPQNVLFDAD---FEAHLSDFGLDRLXXXXXXXXXXXX 965
I + G+ +LH N+VH DIKP+N+L + + DFGL
Sbjct: 151 IMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSF----FSKDYKLR 206
Query: 966 XXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKK 1021
+GT Y++PE L + ++ DV+S G+++ LL G P D+DI+K V+K
Sbjct: 207 DRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEK 261
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 114/271 (42%), Gaps = 27/271 (9%)
Query: 830 LSIRRLPD--GSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLG 887
++++ LP+ DE F EA + K H+N+ G + R ++ + M G+L
Sbjct: 78 VAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP-RFILLELMAGGDLK 136
Query: 888 TLLQEASHQDGHVLNWPMRHL--IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFE--- 942
+ L+E + + M L +A +A G +L ++ +H DI +N L
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 196
Query: 943 AHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
A + DFG+ R + + ++ PEA + G T ++D +SFG++L E+ +
Sbjct: 197 AKIGDFGMARDIYRASYYRKGGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
Query: 1003 -GKRPVMFTQDEDIVKWVKKQLQKGQITXXXXXXXXXXXXXXXXWEEFLLGVKVALLCTA 1061
G P +++++++V G++ W+
Sbjct: 256 LGYMPYPSKSNQEVLEFVTS---GGRMDPPKNCPGPVYRIMTQCWQH------------- 299
Query: 1062 PDPIDRPTMSDIVFMLEGCRVGPDIPSSADP 1092
P DRP + I+ +E C PD+ ++A P
Sbjct: 300 -QPEDRPNFAIILERIEYCTQDPDVINTALP 329
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 14/213 (6%)
Query: 798 TVEATRQFDEENVLSRTRYGLVFKACY---NDGM--VLSIRRLPD--GSLDENLFRKEAE 850
TV R + L +G V CY NDG +++++ L G + +++E +
Sbjct: 9 TVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEID 68
Query: 851 FLGKVRHRNLTVLRGYYAGAPDLRL-LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLI 909
L + H ++ +G + L LV +Y+P G+L L H + L
Sbjct: 69 ILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR------HSIGLAQLLLF 122
Query: 910 ALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVG 969
A + G+A+LH+ + +H ++ +NVL D D + DFGL +
Sbjct: 123 AQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDS 182
Query: 970 TLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +PE + SDV+SFG+ L ELLT
Sbjct: 183 PVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 99 RELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 156
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 157 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 206
Query: 963 XXXXXVGTLGYVSPEAALTG-ETTKESDVYSFGIVLLELLTGK 1004
V T Y +PE L D++S G ++ ELLTG+
Sbjct: 207 EMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine Based
Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 133
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 134 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 183
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 133
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DFGL R
Sbjct: 134 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDD 183
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 114/271 (42%), Gaps = 27/271 (9%)
Query: 830 LSIRRLPD--GSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLG 887
++++ LP+ DE F EA + K H+N+ G + R ++ + M G+L
Sbjct: 90 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP-RFILLELMAGGDLK 148
Query: 888 TLLQEASHQDGHVLNWPMRHL--IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFE--- 942
+ L+E + + M L +A +A G +L ++ +H DI +N L
Sbjct: 149 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 208
Query: 943 AHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
A + DFG+ R + + ++ PEA + G T ++D +SFG++L E+ +
Sbjct: 209 AKIGDFGMARDIYRASYYRKGGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
Query: 1003 -GKRPVMFTQDEDIVKWVKKQLQKGQITXXXXXXXXXXXXXXXXWEEFLLGVKVALLCTA 1061
G P +++++++V G++ W+
Sbjct: 268 LGYMPYPSKSNQEVLEFVTS---GGRMDPPKNCPGPVYRIMTQCWQH------------- 311
Query: 1062 PDPIDRPTMSDIVFMLEGCRVGPDIPSSADP 1092
P DRP + I+ +E C PD+ ++A P
Sbjct: 312 -QPEDRPNFAIILERIEYCTQDPDVINTALP 341
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 11/146 (7%)
Query: 863 LRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHT 922
L Y G D +V +Y+ G+L ++ E +G + + + L FLH+
Sbjct: 83 LDSYLVG--DELWVVMEYLAGGSLTDVVTETCMDEGQI------AAVCRECLQALEFLHS 134
Query: 923 SNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTG 982
+ ++H DIK N+L D L+DFG VGT +++PE
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFG---FCAQITPEQSKRSEMVGTPYWMAPEVVTRK 191
Query: 983 ETTKESDVYSFGIVLLELLTGKRPVM 1008
+ D++S GI+ +E++ G+ P +
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPYL 217
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 11/146 (7%)
Query: 863 LRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHT 922
L Y G D +V +Y+ G+L ++ E +G + + + L FLH+
Sbjct: 83 LDSYLVG--DELWVVMEYLAGGSLTDVVTETCMDEGQI------AAVCRECLQALEFLHS 134
Query: 923 SNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTG 982
+ ++H DIK N+L D L+DFG VGT +++PE
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFG---FCAQITPEQSKRSTMVGTPYWMAPEVVTRK 191
Query: 983 ETTKESDVYSFGIVLLELLTGKRPVM 1008
+ D++S GI+ +E++ G+ P +
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPYL 217
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 11/146 (7%)
Query: 863 LRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHT 922
L Y G D +V +Y+ G+L ++ E +G + + + L FLH+
Sbjct: 83 LDSYLVG--DELWVVMEYLAGGSLTDVVTETCMDEGQI------AAVCRECLQALEFLHS 134
Query: 923 SNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTG 982
+ ++H DIK N+L D L+DFG VGT +++PE
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFG---FCAQITPEQSKRSXMVGTPYWMAPEVVTRK 191
Query: 983 ETTKESDVYSFGIVLLELLTGKRPVM 1008
+ D++S GI+ +E++ G+ P +
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPYL 217
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 10/134 (7%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG--HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
LV MP G L ++E + G +LNW M+ +A+G+++L +VH D+ +
Sbjct: 95 LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQ------IAKGMSYLEDVRLVHRDLAAR 148
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
NVL + ++DFGL RL V + +++ E+ L T +SDV+S+
Sbjct: 149 NVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV-PIKWMALESILRRRFTHQSDVWSY 207
Query: 994 GIVLLELLT-GKRP 1006
G+ + EL+T G +P
Sbjct: 208 GVTVWELMTFGAKP 221
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 11/146 (7%)
Query: 863 LRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHT 922
L Y G D +V +Y+ G+L ++ E +G + + + L FLH+
Sbjct: 84 LDSYLVG--DELWVVMEYLAGGSLTDVVTETCMDEGQI------AAVCRECLQALEFLHS 135
Query: 923 SNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTG 982
+ ++H DIK N+L D L+DFG VGT +++PE
Sbjct: 136 NQVIHRDIKSDNILLGMDGSVKLTDFG---FCAQITPEQSKRSXMVGTPYWMAPEVVTRK 192
Query: 983 ETTKESDVYSFGIVLLELLTGKRPVM 1008
+ D++S GI+ +E++ G+ P +
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEGEPPYL 218
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 73/168 (43%), Gaps = 14/168 (8%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL-LVYDYMPNGNLGTLLQEASHQDGHVLNW 903
FR+E + L + +T L +YA D L LV DY G+L TLL + + L
Sbjct: 121 FREERDVLVNGDSKWITTL--HYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR----LPE 174
Query: 904 PMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXX 963
M + + +H + VH DIKP N+L D + L+DFG
Sbjct: 175 EMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFG--SCLKLMEDGTVQ 232
Query: 964 XXXXVGTLGYVSPEAALTGETTK-----ESDVYSFGIVLLELLTGKRP 1006
VGT Y+SPE E K E D +S G+ + E+L G+ P
Sbjct: 233 SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 176/447 (39%), Gaps = 113/447 (25%)
Query: 157 DLPRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPA------TFEGTLPS 210
+LP ++ Y DLS N + TS S L LQ + K ++ P TF G
Sbjct: 27 ELPAHVNYVDLSLNSIAELNETSFSRLQDLQFL-----KVEQQTPGLVIRNNTFRGL--- 78
Query: 211 AIANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVV-------------- 256
SSL+ L N + A L L+V++L Q NL G V
Sbjct: 79 -----SSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEM 133
Query: 257 ------------PASMFCNVSGYPPSIRVVQLGFNAFTNVAGPE----TGSCSSVLQVLD 300
PAS F N+ + V+ L FN ++ + G ++L++
Sbjct: 134 LVLRDNNIKKIQPASFFLNMRRF----HVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189
Query: 301 LQQNQIRGAFPLWLT-----RASTLTRLDVSGN----SISGKIPAQIGGLWRLEELKMAN 351
+ + + W + +++T LD+SGN S++ + I G +++ L ++N
Sbjct: 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGT-KIQSLILSN 248
Query: 352 N-----SFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSI 406
+ SFG K + + LE + G+K+ L+ + +
Sbjct: 249 SYNMGSSFG---HTNFKDPDNFTFKGLEAS--------------GVKTCDLSKSKIFALL 291
Query: 407 PASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASI-GNLSQLM 465
+ F + LE L L N ++ G+ +L L+LS+N F G + + + NL +L
Sbjct: 292 KSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQN-FLGSIDSRMFENLDKLE 350
Query: 466 VFNLSGNAFSGRIPAXXXXXXXXXXXXXXXQNFSGELPIELAGLPNLQVIALQENKLSGN 525
V +LS N Q+F GLPNL+ +AL N+L +
Sbjct: 351 VLDLSYNHIRA----------------LGDQSF--------LGLPNLKELALDTNQLK-S 385
Query: 526 VPEG-FSSLMSLRYLNLSFNGFVGQIP 551
VP+G F L SL+ + L N + P
Sbjct: 386 VPDGIFDRLTSLQKIWLHTNPWDCSCP 412
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 34/230 (14%)
Query: 800 EATRQFDEENVLSRTRYGLVFKACYND--GMVLSIRRL---PDGSLDENLFRKEAEFLGK 854
++ +++ ++ YG+V K C N G +++I++ D + + + +E + L +
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMK-CRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ 80
Query: 855 VRHRNLTVL-------RGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRH 907
+RH NL L + +Y LV++++ + L L + D V+ +
Sbjct: 81 LRHENLVNLLEVCKKKKRWY--------LVFEFVDHTILDDLELFPNGLDYQVVQKYLFQ 132
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+I G+ F H+ N++H DIKP+N+L L DFG R
Sbjct: 133 II-----NGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFAR---TLAAPGEVYDDE 184
Query: 968 VGTLGYVSPEAALTGETT--KESDVYSFGIVLLELLTGKRPVMFTQDEDI 1015
V T Y +PE L G+ K DV++ G ++ E+ G+ +F D DI
Sbjct: 185 VATRWYRAPE-LLVGDVKYGKAVDVWAIGCLVTEMFMGEP--LFPGDSDI 231
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 100/224 (44%), Gaps = 31/224 (13%)
Query: 801 ATRQFDEENVLSRTRYGLVFKA-CYNDGMVLSIRRLPDGSLDENL--------FRKEAEF 851
A + + E + + +GLV K D V++I+ L G + F++E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 852 LGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIAL 911
+ + H N+ L G P + V +++P G+L L + +H + W ++ + L
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRM---VMEFVPCGDLYHRLLDKAHP----IKWSVKLRLML 129
Query: 912 GVARGLAFLHTSN--MVHGDIKPQNVLF-----DADFEAHLSDFGLDRLXXXXXXXXXXX 964
+A G+ ++ N +VH D++ N+ +A A ++DFG +
Sbjct: 130 DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ------QSVHSV 183
Query: 965 XXXVGTLGYVSPEAALTGET--TKESDVYSFGIVLLELLTGKRP 1006
+G +++PE E T+++D YSF ++L +LTG+ P
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 14/213 (6%)
Query: 798 TVEATRQFDEENVLSRTRYGLVFKACY---NDGM--VLSIRRLPD--GSLDENLFRKEAE 850
TV R + L +G V CY NDG +++++ L G + +++E +
Sbjct: 9 TVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEID 68
Query: 851 FLGKVRHRNLTVLRGYYAGAPDLRL-LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLI 909
L + H ++ +G + L LV +Y+P G+L L H + L
Sbjct: 69 ILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR------HSIGLAQLLLF 122
Query: 910 ALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVG 969
A + G+A+LH + +H ++ +NVL D D + DFGL +
Sbjct: 123 AQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDS 182
Query: 970 TLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +PE + SDV+SFG+ L ELLT
Sbjct: 183 PVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 62/248 (25%), Positives = 109/248 (43%), Gaps = 41/248 (16%)
Query: 784 PKLVMFNNKITLAETVEATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDE 842
PK +++N + F +++L YG+V A + G +++I+++ D+
Sbjct: 2 PKRIVYN----------ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE--PFDK 49
Query: 843 NLFR----KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDG 898
LF +E + L +H N+ + + D N N ++QE D
Sbjct: 50 PLFALRTLREIKILKHFKHENIITI---------FNIQRPDSFENFNEVYIIQELMQTDL 100
Query: 899 H-VLNWPM---RHL--IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR 952
H V++ M H+ R + LH SN++H D+KP N+L +++ + + DFGL R
Sbjct: 101 HRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLAR 160
Query: 953 LXXXXXX-------XXXXXXXXVGTLGYVSPEAALT-GETTKESDVYSFGIVLLELLTGK 1004
+ V T Y +PE LT + ++ DV+S G +L EL +
Sbjct: 161 IIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-R 219
Query: 1005 RPVMFTQD 1012
RP+ +D
Sbjct: 220 RPIFPGRD 227
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 14/178 (7%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMR 906
+E L + H N+ L ++ + L++ Y G L E H+ N
Sbjct: 85 EEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKG----GELFDEIIHR--MKFNEVDA 138
Query: 907 HLIALGVARGLAFLHTSNMVHGDIKPQNVLFDA---DFEAHLSDFGLDRLXXXXXXXXXX 963
+I V G+ +LH N+VH D+KP+N+L ++ D + DFGL +
Sbjct: 139 AVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV----FENQKK 194
Query: 964 XXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKK 1021
+GT Y++PE L + ++ DV+S G++L LL G P D++I++ V+K
Sbjct: 195 MKERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEK 251
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 61/248 (24%), Positives = 108/248 (43%), Gaps = 41/248 (16%)
Query: 784 PKLVMFNNKITLAETVEATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDE 842
PK +++N + F +++L YG+V A + G +++I+++ D+
Sbjct: 2 PKRIVYN----------ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE--PFDK 49
Query: 843 NLFR----KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDG 898
LF +E + L +H N+ + + D N N ++QE D
Sbjct: 50 PLFALRTLREIKILKHFKHENIITI---------FNIQRPDSFENFNEVYIIQELMQTDL 100
Query: 899 H-VLNWPM---RHL--IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR 952
H V++ M H+ R + LH SN++H D+KP N+L +++ + + DFGL R
Sbjct: 101 HRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLAR 160
Query: 953 LXXXXXX-------XXXXXXXXVGTLGYVSPEAALT-GETTKESDVYSFGIVLLELLTGK 1004
+ V T Y +PE LT + ++ DV+S G +L EL +
Sbjct: 161 IIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-R 219
Query: 1005 RPVMFTQD 1012
RP+ +D
Sbjct: 220 RPIFPGRD 227
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 13/183 (7%)
Query: 842 ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVL 901
E E L K++H N+ L Y L L++ + G L + E G
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIM-QLVSGGELFDRIVE----KGFYT 114
Query: 902 NWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLF---DADFEAHLSDFGLDRLXXXXX 958
LI V + +LH +VH D+KP+N+L+ D D + +SDFGL ++
Sbjct: 115 ERDASRLI-FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 959 XXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKW 1018
GT GYV+PE +K D +S G++ LL G P D + +
Sbjct: 174 VLSTA----CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQ 229
Query: 1019 VKK 1021
+ K
Sbjct: 230 ILK 232
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 13/183 (7%)
Query: 842 ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVL 901
E E L K++H N+ L Y L L++ + G L + E G
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIM-QLVSGGELFDRIVE----KGFYT 114
Query: 902 NWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLF---DADFEAHLSDFGLDRLXXXXX 958
LI V + +LH +VH D+KP+N+L+ D D + +SDFGL ++
Sbjct: 115 ERDASRLI-FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 959 XXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKW 1018
GT GYV+PE +K D +S G++ LL G P D + +
Sbjct: 174 VLSTA----CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQ 229
Query: 1019 VKK 1021
+ K
Sbjct: 230 ILK 232
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 13/183 (7%)
Query: 842 ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVL 901
E E L K++H N+ L Y L L++ + G L + E G
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIM-QLVSGGELFDRIVE----KGFYT 114
Query: 902 NWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLF---DADFEAHLSDFGLDRLXXXXX 958
LI V + +LH +VH D+KP+N+L+ D D + +SDFGL ++
Sbjct: 115 ERDASRLI-FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 959 XXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKW 1018
GT GYV+PE +K D +S G++ LL G P D + +
Sbjct: 174 VLSTA----CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQ 229
Query: 1019 VKK 1021
+ K
Sbjct: 230 ILK 232
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 13/183 (7%)
Query: 842 ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVL 901
E E L K++H N+ L Y L L++ + G L + E G
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIM-QLVSGGELFDRIVE----KGFYT 114
Query: 902 NWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLF---DADFEAHLSDFGLDRLXXXXX 958
LI V + +LH +VH D+KP+N+L+ D D + +SDFGL ++
Sbjct: 115 ERDASRLI-FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 959 XXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKW 1018
GT GYV+PE +K D +S G++ LL G P D + +
Sbjct: 174 VLSTA----CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQ 229
Query: 1019 VKK 1021
+ K
Sbjct: 230 ILK 232
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of
3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of
3brb-Pp1
Length = 298
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDA---DFEAHLSDFGLDRLXXXXXXXXXXXXXXVG 969
V G+ ++H + +VH D+KP+N+L ++ D + DFGL +G
Sbjct: 141 VLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS----THFEASKKMKDKIG 196
Query: 970 TLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKK 1021
T Y++PE L G ++ DV+S G++L LL+G P + DI+K V+K
Sbjct: 197 TAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK 247
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
Length = 287
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 100/224 (44%), Gaps = 31/224 (13%)
Query: 801 ATRQFDEENVLSRTRYGLVFKA-CYNDGMVLSIRRLPDGSLDENL--------FRKEAEF 851
A + + E + + +GLV K D V++I+ L G + F++E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 852 LGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIAL 911
+ + H N+ L G P + V +++P G+L L + +H + W ++ + L
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRM---VMEFVPCGDLYHRLLDKAHP----IKWSVKLRLML 129
Query: 912 GVARGLAFLHTSN--MVHGDIKPQNVLF-----DADFEAHLSDFGLDRLXXXXXXXXXXX 964
+A G+ ++ N +VH D++ N+ +A A ++DF L +
Sbjct: 130 DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ------QSVHSV 183
Query: 965 XXXVGTLGYVSPEAALTGET--TKESDVYSFGIVLLELLTGKRP 1006
+G +++PE E T+++D YSF ++L +LTG+ P
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPN----GNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A + Y+ +L +++ + D HV
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHV-- 133
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H++ ++H D+KP NV + D E + DFGL R
Sbjct: 134 ----QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR------QADE 183
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELL GK
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 61/248 (24%), Positives = 108/248 (43%), Gaps = 41/248 (16%)
Query: 784 PKLVMFNNKITLAETVEATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDE 842
PK +++N + F +++L YG+V A + G +++I+++ D+
Sbjct: 2 PKRIVYN----------ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE--PFDK 49
Query: 843 NLFR----KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDG 898
LF +E + L +H N+ + + D N N ++QE D
Sbjct: 50 PLFALRTLREIKILKHFKHENIITI---------FNIQRPDSFENFNEVYIIQELMQTDL 100
Query: 899 H-VLNWPM---RHL--IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR 952
H V++ M H+ R + LH SN++H D+KP N+L +++ + + DFGL R
Sbjct: 101 HRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLAR 160
Query: 953 LXXXXXX-------XXXXXXXXVGTLGYVSPEAALT-GETTKESDVYSFGIVLLELLTGK 1004
+ V T Y +PE LT + ++ DV+S G +L EL +
Sbjct: 161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-R 219
Query: 1005 RPVMFTQD 1012
RP+ +D
Sbjct: 220 RPIFPGRD 227
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The
Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The
Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The
Structure Of The Cdk6-P16ink4a Tumor Suppressor Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 915 RGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
RGL FLH+ +VH D+KPQN+L + + L+DFGL R+ V TL Y
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI----YSFQMALTSVVVTLWYR 186
Query: 975 SPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+PE L D++S G + E+ +R +F D+
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMF--RRKPLFRGSSDV 225
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 13/150 (8%)
Query: 862 VLRGYYAGAPDLRL-LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
V++ +YA D L +V +YMP G+L L+ + + ++AL +
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDA------I 184
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ +H D+KP N+L D L+DFG VGT Y+SPE
Sbjct: 185 HSMGFIHRDVKPDNMLLDKSGHLKLADFGT--CMKMNKEGMVRCDTAVGTPDYISPEVLK 242
Query: 981 T----GETTKESDVYSFGIVLLELLTGKRP 1006
+ G +E D +S G+ L E+L G P
Sbjct: 243 SQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase
11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPN----GNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A + Y+ +L +++ + D HV
Sbjct: 68 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHV-- 125
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H++ ++H D+KP NV + D E + DFGL R
Sbjct: 126 ----QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR------QADE 175
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELL GK
Sbjct: 176 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 13/150 (8%)
Query: 862 VLRGYYAGAPDLRL-LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
V++ +YA D L +V +YMP G+L L+ + + ++AL +
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDA------I 189
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ +H D+KP N+L D L+DFG VGT Y+SPE
Sbjct: 190 HSMGFIHRDVKPDNMLLDKSGHLKLADFGT--CMKMNKEGMVRCDTAVGTPDYISPEVLK 247
Query: 981 T----GETTKESDVYSFGIVLLELLTGKRP 1006
+ G +E D +S G+ L E+L G P
Sbjct: 248 SQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 15/184 (8%)
Query: 841 DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQ--DG 898
D+ RKE + + +RH L L + ++ +++Y++M G L + + ++ +
Sbjct: 197 DKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEM-VMIYEFMSGGELFEKVADEHNKMSED 255
Query: 899 HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADF--EAHLSDFGLDRLXXX 956
+ + MR V +GL +H +N VH D+KP+N++F E L DFGL
Sbjct: 256 EAVEY-MRQ-----VCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGL----TA 305
Query: 957 XXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIV 1016
GT + +PE A +D++S G++ LL+G P D++ +
Sbjct: 306 HLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETL 365
Query: 1017 KWVK 1020
+ VK
Sbjct: 366 RNVK 369
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 114/271 (42%), Gaps = 27/271 (9%)
Query: 830 LSIRRLPD--GSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLG 887
++++ LP+ DE F EA + K H+N+ G + R ++ + M G+L
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP-RFILLELMAGGDLK 122
Query: 888 TLLQEASHQDGHVLNWPMRHL--IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFE--- 942
+ L+E + + M L +A +A G +L ++ +H DI +N L
Sbjct: 123 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 182
Query: 943 AHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
A + DFG+ + + + ++ PEA + G T ++D +SFG++L E+ +
Sbjct: 183 AKIGDFGMAQDIYRASYYRKGGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
Query: 1003 -GKRPVMFTQDEDIVKWVKKQLQKGQITXXXXXXXXXXXXXXXXWEEFLLGVKVALLCTA 1061
G P +++++++V G++ W+
Sbjct: 242 LGYMPYPSKSNQEVLEFVTS---GGRMDPPKNCPGPVYRIMTQCWQH------------- 285
Query: 1062 PDPIDRPTMSDIVFMLEGCRVGPDIPSSADP 1092
P DRP + I+ +E C PD+ ++A P
Sbjct: 286 -QPEDRPNFAIILERIEYCTQDPDVINTALP 315
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 13/150 (8%)
Query: 862 VLRGYYAGAPDLRL-LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
V++ +YA D L +V +YMP G+L L+ + + ++AL +
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDA------I 189
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ +H D+KP N+L D L+DFG VGT Y+SPE
Sbjct: 190 HSMGFIHRDVKPDNMLLDKSGHLKLADFGT--CMKMNKEGMVRCDTAVGTPDYISPEVLK 247
Query: 981 T----GETTKESDVYSFGIVLLELLTGKRP 1006
+ G +E D +S G+ L E+L G P
Sbjct: 248 SQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 5/159 (3%)
Query: 848 EAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRH 907
E + L KV R + L + DL LV M G++ + +D P
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDL-CLVMTIMNGGDIRYHIYNVD-EDNPGFQEPRAI 292
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ GL LH N+++ D+KP+NVL D D +SD G L
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG---LAVELKAGQTKTKGY 349
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
GT G+++PE L E D ++ G+ L E++ + P
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 15/196 (7%)
Query: 829 VLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGT 888
V+S R++ + E+L R E + L ++ H N+ L ++ L+ Y G
Sbjct: 58 VISKRQVKQKTDKESLLR-EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG----GE 112
Query: 889 LLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDA---DFEAHL 945
L E + R I V G+ ++H + +VH D+KP+N+L ++ D +
Sbjct: 113 LFDEIISRKRFSEVDAAR--IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRI 170
Query: 946 SDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKR 1005
DFGL +GT Y++PE L G ++ DV+S G++L LL+G
Sbjct: 171 IDFGL----STHFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCP 225
Query: 1006 PVMFTQDEDIVKWVKK 1021
P + DI+K V+K
Sbjct: 226 PFNGANEYDILKKVEK 241
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 10/187 (5%)
Query: 837 DGSLD-ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASH 895
D +LD + F EA + + H ++ L G P ++ + P G LG L+
Sbjct: 63 DCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTW--IIMELYPYGELGHYLE---- 116
Query: 896 QDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXX 955
++ + L L +L + + +A+L + N VH DI +N+L + L DFGL R
Sbjct: 117 RNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIE 176
Query: 956 XXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDED 1014
+ ++SPE+ T SDV+ F + + E+L+ GK+P + +++D
Sbjct: 177 DEDYYKASVTRL--PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD 234
Query: 1015 IVKWVKK 1021
++ ++K
Sbjct: 235 VIGVLEK 241
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 10/187 (5%)
Query: 837 DGSLD-ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASH 895
D +LD + F EA + + H ++ L G P ++ + P G LG L+
Sbjct: 47 DCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTW--IIMELYPYGELGHYLE---- 100
Query: 896 QDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXX 955
++ + L L +L + + +A+L + N VH DI +N+L + L DFGL R
Sbjct: 101 RNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIE 160
Query: 956 XXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDED 1014
+ ++SPE+ T SDV+ F + + E+L+ GK+P + +++D
Sbjct: 161 DEDYYKASVTRL--PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD 218
Query: 1015 IVKWVKK 1021
++ ++K
Sbjct: 219 VIGVLEK 225
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 10/187 (5%)
Query: 837 DGSLD-ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASH 895
D +LD + F EA + + H ++ L G P ++ + P G LG L+
Sbjct: 51 DCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTW--IIMELYPYGELGHYLE---- 104
Query: 896 QDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXX 955
++ + L L +L + + +A+L + N VH DI +N+L + L DFGL R
Sbjct: 105 RNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIE 164
Query: 956 XXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDED 1014
+ ++SPE+ T SDV+ F + + E+L+ GK+P + +++D
Sbjct: 165 DEDYYKASVTRL--PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD 222
Query: 1015 IVKWVKK 1021
++ ++K
Sbjct: 223 VIGVLEK 229
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
Length = 308
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 51/182 (28%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYA-GAPDLRLLVYDYMPNGNLGTLLQ--EASHQDGHVL 901
F EA + + ++ L G + G P L ++ + M G+L + L+ ++ VL
Sbjct: 69 FLNEASVMKEFNCHHVVRLLGVVSQGQPTL--VIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 902 NWP-MRHLIALG--VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXX 958
P + +I + +A G+A+L+ + VH D+ +N + DF + DFG+ R
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETD 186
Query: 959 XXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVK 1017
+ + ++SPE+ G T SDV+SFG+VL E+ T ++P +E +++
Sbjct: 187 XXRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 245
Query: 1018 WV 1019
+V
Sbjct: 246 FV 247
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled Receptor
Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled Receptor
Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 5/159 (3%)
Query: 848 EAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRH 907
E + L KV R + L + DL LV M G++ + +D P
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDL-CLVMTIMNGGDIRYHIYNVD-EDNPGFQEPRAI 292
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ GL LH N+++ D+KP+NVL D D +SD G L
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG---LAVELKAGQTKTKGY 349
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
GT G+++PE L E D ++ G+ L E++ + P
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 5/159 (3%)
Query: 848 EAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRH 907
E + L KV R + L + DL LV M G++ + +D P
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDL-CLVMTIMNGGDIRYHIYNVD-EDNPGFQEPRAI 292
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ GL LH N+++ D+KP+NVL D D +SD G L
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG---LAVELKAGQTKTKGY 349
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
GT G+++PE L E D ++ G+ L E++ + P
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 5/159 (3%)
Query: 848 EAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRH 907
E + L KV R + L + DL LV M G++ + +D P
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDL-CLVMTIMNGGDIRYHIYNVD-EDNPGFQEPRAI 292
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ GL LH N+++ D+KP+NVL D D +SD G L
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG---LAVELKAGQTKTKGY 349
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
GT G+++PE L E D ++ G+ L E++ + P
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 15/196 (7%)
Query: 829 VLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGT 888
V+S R++ + E+L R E + L ++ H N+ L ++ L+ Y G
Sbjct: 82 VISKRQVKQKTDKESLLR-EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG----GE 136
Query: 889 LLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDA---DFEAHL 945
L E + R I V G+ ++H + +VH D+KP+N+L ++ D +
Sbjct: 137 LFDEIISRKRFSEVDAAR--IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRI 194
Query: 946 SDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKR 1005
DFGL +GT Y++PE L G ++ DV+S G++L LL+G
Sbjct: 195 IDFGL----STHFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCP 249
Query: 1006 PVMFTQDEDIVKWVKK 1021
P + DI+K V+K
Sbjct: 250 PFNGANEYDILKKVEK 265
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline Isostere
Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline Isostere
Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline Isostere
Inhibitor (34)
Length = 307
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 16/187 (8%)
Query: 846 RKEAEFLGKVR-------HRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ--EASHQ 896
R+ EFL + H + +L G P L ++ + M G+L + L+ +
Sbjct: 63 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL--VIMELMTRGDLKSYLRSLRPEME 120
Query: 897 DGHVLNWP-MRHLIALG--VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRL 953
+ VL P + +I + +A G+A+L+ + VH D+ +N + DF + DFG+ R
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 180
Query: 954 XXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQD 1012
+ + ++SPE+ G T SDV+SFG+VL E+ T ++P +
Sbjct: 181 IYETDYYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 239
Query: 1013 EDIVKWV 1019
E ++++V
Sbjct: 240 EQVLRFV 246
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 15/196 (7%)
Query: 829 VLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGT 888
V+S R++ + E+L R E + L ++ H N+ L ++ L+ Y G
Sbjct: 81 VISKRQVKQKTDKESLLR-EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG----GE 135
Query: 889 LLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDA---DFEAHL 945
L E + R I V G+ ++H + +VH D+KP+N+L ++ D +
Sbjct: 136 LFDEIISRKRFSEVDAAR--IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRI 193
Query: 946 SDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKR 1005
DFGL +GT Y++PE L G ++ DV+S G++L LL+G
Sbjct: 194 IDFGL----STHFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCP 248
Query: 1006 PVMFTQDEDIVKWVKK 1021
P + DI+K V+K
Sbjct: 249 PFNGANEYDILKKVEK 264
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 51/182 (28%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYA-GAPDLRLLVYDYMPNGNLGTLLQ--EASHQDGHVL 901
F EA + + ++ L G + G P L ++ + M G+L + L+ ++ VL
Sbjct: 60 FLNEASVMKEFNCHHVVRLLGVVSQGQPTL--VIMELMTRGDLKSYLRSLRPEMENNPVL 117
Query: 902 NWP-MRHLIALG--VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXX 958
P + +I + +A G+A+L+ + VH D+ +N + DF + DFG+ R
Sbjct: 118 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETD 177
Query: 959 XXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVK 1017
+ + ++SPE+ G T SDV+SFG+VL E+ T ++P +E +++
Sbjct: 178 XXRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 236
Query: 1018 WV 1019
+V
Sbjct: 237 FV 238
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With
An Hydantoin Inhibitor
Length = 305
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 16/187 (8%)
Query: 846 RKEAEFLGKVR-------HRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ--EASHQ 896
R+ EFL + H + +L G P L ++ + M G+L + L+ +
Sbjct: 61 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL--VIMELMTRGDLKSYLRSLRPEME 118
Query: 897 DGHVLNWP-MRHLIALG--VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRL 953
+ VL P + +I + +A G+A+L+ + VH D+ +N + DF + DFG+ R
Sbjct: 119 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 178
Query: 954 XXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQD 1012
+ + ++SPE+ G T SDV+SFG+VL E+ T ++P +
Sbjct: 179 IYETDYYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 237
Query: 1013 EDIVKWV 1019
E ++++V
Sbjct: 238 EQVLRFV 244
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 16/187 (8%)
Query: 846 RKEAEFLGKVR-------HRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ--EASHQ 896
R+ EFL + H + +L G P L ++ + M G+L + L+ +
Sbjct: 64 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL--VIMELMTRGDLKSYLRSLRPEME 121
Query: 897 DGHVLNWP-MRHLIALG--VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRL 953
+ VL P + +I + +A G+A+L+ + VH D+ +N + DF + DFG+ R
Sbjct: 122 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 181
Query: 954 XXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQD 1012
+ + ++SPE+ G T SDV+SFG+VL E+ T ++P +
Sbjct: 182 IYETDYYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 240
Query: 1013 EDIVKWV 1019
E ++++V
Sbjct: 241 EQVLRFV 247
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase
5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase
5
Length = 295
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 52/222 (23%), Positives = 103/222 (46%), Gaps = 20/222 (9%)
Query: 796 AETVEATRQFDEEN---VLSRTRYGLVFKAC-YNDGMVLSIRRLPD-GSLDENLFRKEAE 850
++ +E ++DE VL + YG+V+ ++ + ++I+ +P+ S +E
Sbjct: 12 SDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIA 71
Query: 851 FLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEA---SHQDGHVLNWPMRH 907
++H+N+ G ++ +++ + + +P G+L LL+ + + + +
Sbjct: 72 LHKHLKHKNIVQYLGSFSENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ 130
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDA-DFEAHLSDFGLDRLXXXXXXXXXXXXX 966
++ GL +LH + +VH DIK NVL + +SDFG +
Sbjct: 131 IL-----EGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSK---RLAGINPCTET 182
Query: 967 XVGTLGYVSPEAALTGET--TKESDVYSFGIVLLELLTGKRP 1006
GTL Y++PE G K +D++S G ++E+ TGK P
Sbjct: 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 7/182 (3%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F +E + + HRNL L G P +V + P LG+LL GH L
Sbjct: 58 FIREVNAMHSLDHRNLIRLYGVVLTPP--MKMVTELAP---LGSLLDRLRKHQGHFLLGT 112
Query: 905 MRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXX 964
+ A+ VA G+ +L + +H D+ +N+L + DFGL R
Sbjct: 113 LSRY-AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQ 171
Query: 965 XXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQL 1023
+ +PE+ T + SD + FG+ L E+ T G+ P + I+ + K+
Sbjct: 172 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG 231
Query: 1024 QK 1025
++
Sbjct: 232 ER 233
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 810 VLSRTRYGLVFKACYND-GMVLSIRRLPDGSLDENL---FRKEAEFLGKVRHRNLTVLRG 865
VL + +G K + + G V+ ++ L DE F KE + + + H N VL+
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELI--RFDEETQRTFLKEVKVMRCLEHPN--VLKF 72
Query: 866 YYAGAPDLRL-LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSN 924
D RL + +Y+ G L +++ Q W R A +A G+A+LH+ N
Sbjct: 73 IGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQ----YPWSQRVSFAKDIASGMAYLHSMN 128
Query: 925 MVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXX-----------XXXXXXXVGTLGY 973
++H D+ N L + ++DFGL RL VG +
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYW 188
Query: 974 VSPEAALTGETTKES-DVYSFGIVLLELL 1001
++PE + G + E DV+SFGIVL E++
Sbjct: 189 MAPE-MINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPN----GNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A + Y+ +L +++ + D HV
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHV-- 133
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H++ ++H D+KP NV + D E + DFGL R
Sbjct: 134 ----QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR------QADE 183
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELL GK
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 7/182 (3%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F +E + + HRNL L G P +V + P LG+LL GH L
Sbjct: 58 FIREVNAMHSLDHRNLIRLYGVVLTPP--MKMVTELAP---LGSLLDRLRKHQGHFLLGT 112
Query: 905 MRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXX 964
+ A+ VA G+ +L + +H D+ +N+L + DFGL R
Sbjct: 113 LSRY-AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQ 171
Query: 965 XXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQL 1023
+ +PE+ T + SD + FG+ L E+ T G+ P + I+ + K+
Sbjct: 172 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG 231
Query: 1024 QK 1025
++
Sbjct: 232 ER 233
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
Length = 301
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 10/182 (5%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYA-GAPDLRLLVYDYMPNGNLGTLLQ--EASHQDGHVL 901
F EA + + ++ L G + G P L ++ + M G+L + L+ ++ VL
Sbjct: 62 FLNEASVMKEFNCHHVVRLLGVVSQGQPTL--VIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 902 NWP-MRHLIALG--VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXX 958
P + +I + +A G+A+L+ + VH D+ +N + DF + DFG+ R
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 179
Query: 959 XXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVK 1017
+ + ++SPE+ G T SDV+SFG+VL E+ T ++P +E +++
Sbjct: 180 YYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 238
Query: 1018 WV 1019
+V
Sbjct: 239 FV 240
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 10/182 (5%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYA-GAPDLRLLVYDYMPNGNLGTLLQ--EASHQDGHVL 901
F EA + + ++ L G + G P L ++ + M G+L + L+ ++ VL
Sbjct: 97 FLNEASVMKEFNCHHVVRLLGVVSQGQPTL--VIMELMTRGDLKSYLRSLRPEMENNPVL 154
Query: 902 NWP-MRHLIALG--VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXX 958
P + +I + +A G+A+L+ + VH D+ +N + DF + DFG+ R
Sbjct: 155 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 214
Query: 959 XXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVK 1017
+ + ++SPE+ G T SDV+SFG+VL E+ T ++P +E +++
Sbjct: 215 YYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 273
Query: 1018 WV 1019
+V
Sbjct: 274 FV 275
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 10/182 (5%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYA-GAPDLRLLVYDYMPNGNLGTLLQ--EASHQDGHVL 901
F EA + + ++ L G + G P L ++ + M G+L + L+ ++ VL
Sbjct: 68 FLNEASVMKEFNCHHVVRLLGVVSQGQPTL--VIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 902 NWP-MRHLIALG--VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXX 958
P + +I + +A G+A+L+ + VH D+ +N + DF + DFG+ R
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 185
Query: 959 XXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVK 1017
+ + ++SPE+ G T SDV+SFG+VL E+ T ++P +E +++
Sbjct: 186 YYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 244
Query: 1018 WV 1019
+V
Sbjct: 245 FV 246
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 7/182 (3%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F +E + + HRNL L G P +V + P LG+LL GH L
Sbjct: 58 FIREVNAMHSLDHRNLIRLYGVVLTPP--MKMVTELAP---LGSLLDRLRKHQGHFLLGT 112
Query: 905 MRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXX 964
+ A+ VA G+ +L + +H D+ +N+L + DFGL R
Sbjct: 113 LSRY-AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQ 171
Query: 965 XXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQL 1023
+ +PE+ T + SD + FG+ L E+ T G+ P + I+ + K+
Sbjct: 172 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG 231
Query: 1024 QK 1025
++
Sbjct: 232 ER 233
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 127
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + FGL R
Sbjct: 128 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR------HTDD 177
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 10/182 (5%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYA-GAPDLRLLVYDYMPNGNLGTLLQ--EASHQDGHVL 901
F EA + + ++ L G + G P L ++ + M G+L + L+ ++ VL
Sbjct: 75 FLNEASVMKEFNCHHVVRLLGVVSQGQPTL--VIMELMTRGDLKSYLRSLRPEMENNPVL 132
Query: 902 NWP-MRHLIALG--VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXX 958
P + +I + +A G+A+L+ + VH D+ +N + DF + DFG+ R
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
Query: 959 XXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVK 1017
+ + ++SPE+ G T SDV+SFG+VL E+ T ++P +E +++
Sbjct: 193 YYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 251
Query: 1018 WV 1019
+V
Sbjct: 252 FV 253
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 7/182 (3%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F +E + + HRNL L G P +V + P LG+LL GH L
Sbjct: 62 FIREVNAMHSLDHRNLIRLYGVVLTPP--MKMVTELAP---LGSLLDRLRKHQGHFLLGT 116
Query: 905 MRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXX 964
+ A+ VA G+ +L + +H D+ +N+L + DFGL R
Sbjct: 117 LSRY-AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQ 175
Query: 965 XXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQL 1023
+ +PE+ T + SD + FG+ L E+ T G+ P + I+ + K+
Sbjct: 176 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG 235
Query: 1024 QK 1025
++
Sbjct: 236 ER 237
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 85/190 (44%), Gaps = 21/190 (11%)
Query: 848 EAEFLGKV-RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ-------EASHQDGH 899
E E + + +H+N+ L G L ++V +Y GNL LQ E S+ H
Sbjct: 124 EMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSH 182
Query: 900 VLNWPMRHL-------IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR 952
P L A VARG+ +L + +H D+ +NVL D ++DFGL R
Sbjct: 183 N---PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239
Query: 953 LXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQ 1011
+ + +++PEA T +SDV+SFG++L E+ T G P
Sbjct: 240 DIHHIDYYKKTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 298
Query: 1012 DEDIVKWVKK 1021
E++ K +K+
Sbjct: 299 VEELFKLLKE 308
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 7/182 (3%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F +E + + HRNL L G P +V + P LG+LL GH L
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPP--MKMVTELAP---LGSLLDRLRKHQGHFLLGT 122
Query: 905 MRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXX 964
+ A+ VA G+ +L + +H D+ +N+L + DFGL R
Sbjct: 123 LSRY-AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQ 181
Query: 965 XXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQL 1023
+ +PE+ T + SD + FG+ L E+ T G+ P + I+ + K+
Sbjct: 182 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG 241
Query: 1024 QK 1025
++
Sbjct: 242 ER 243
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 127
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + D GL R
Sbjct: 128 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR------HTDD 177
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 7/182 (3%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F +E + + HRNL L G P +V + P LG+LL GH L
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPP--MKMVTELAP---LGSLLDRLRKHQGHFLLGT 122
Query: 905 MRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXX 964
+ A+ VA G+ +L + +H D+ +N+L + DFGL R
Sbjct: 123 LSRY-AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQ 181
Query: 965 XXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQL 1023
+ +PE+ T + SD + FG+ L E+ T G+ P + I+ + K+
Sbjct: 182 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG 241
Query: 1024 QK 1025
++
Sbjct: 242 ER 243
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein
Kinase And Immunoglobulin Domains
Length = 491
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 15/184 (8%)
Query: 841 DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQ--DG 898
D+ RKE + + +RH L L + ++ +++Y++M G L + + ++ +
Sbjct: 91 DKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEM-VMIYEFMSGGELFEKVADEHNKMSED 149
Query: 899 HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADF--EAHLSDFGLDRLXXX 956
+ + MR V +GL +H +N VH D+KP+N++F E L DFGL
Sbjct: 150 EAVEY-MRQ-----VCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGL----TA 199
Query: 957 XXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIV 1016
GT + +PE A +D++S G++ LL+G P D++ +
Sbjct: 200 HLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETL 259
Query: 1017 KWVK 1020
+ VK
Sbjct: 260 RNVK 263
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 16/187 (8%)
Query: 846 RKEAEFLGKVR-------HRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ--EASHQ 896
R+ EFL + H + +L G P L ++ + M G+L + L+ +
Sbjct: 60 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL--VIMELMTRGDLKSYLRSLRPAMA 117
Query: 897 DGHVLNWP-MRHLIALG--VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRL 953
+ VL P + +I + +A G+A+L+ + VH D+ +N + DF + DFG+ R
Sbjct: 118 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 177
Query: 954 XXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQD 1012
+ + ++SPE+ G T SDV+SFG+VL E+ T ++P +
Sbjct: 178 IYETDYYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 236
Query: 1013 EDIVKWV 1019
E ++++V
Sbjct: 237 EQVLRFV 243
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 11/146 (7%)
Query: 863 LRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHT 922
L Y G D +V +Y+ G+L ++ E +G + + + L FLH+
Sbjct: 84 LDSYLVG--DELWVVMEYLAGGSLTDVVTETCMDEGQI------AAVCRECLQALEFLHS 135
Query: 923 SNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTG 982
+ ++H +IK N+L D L+DFG VGT +++PE
Sbjct: 136 NQVIHRNIKSDNILLGMDGSVKLTDFG---FCAQITPEQSKRSTMVGTPYWMAPEVVTRK 192
Query: 983 ETTKESDVYSFGIVLLELLTGKRPVM 1008
+ D++S GI+ +E++ G+ P +
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEGEPPYL 218
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 127
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + D GL R
Sbjct: 128 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR------HTDD 177
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 101/227 (44%), Gaps = 32/227 (14%)
Query: 803 RQFDEENVLSRTRYGLVFKAC-YNDGMVLSIRRLPDG---SLDENLFRKEAEFLGKVR-H 857
R+++ L + YG+V+K+ G V++++++ D S D +E L ++ H
Sbjct: 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGH 68
Query: 858 RNLTVLRGYYAGAPDLRL-LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARG 916
N+ L D + LV+DYM +L +++ ++L + + + +
Sbjct: 69 ENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIR------ANILEPVHKQYVVYQLIKV 121
Query: 917 LAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXX------------ 964
+ +LH+ ++H D+KP N+L +A+ ++DFGL R
Sbjct: 122 IKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFD 181
Query: 965 ------XXXVGTLGYVSPEAAL-TGETTKESDVYSFGIVLLELLTGK 1004
V T Y +PE L + + TK D++S G +L E+L GK
Sbjct: 182 DDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 57.4 bits (137), Expect = 5e-08, Method: Composition-based stats.
Identities = 52/219 (23%), Positives = 101/219 (46%), Gaps = 20/219 (9%)
Query: 799 VEATRQFDEEN---VLSRTRYGLVFKAC-YNDGMVLSIRRLPD-GSLDENLFRKEAEFLG 853
+E ++DE VL + YG+V+ ++ + ++I+ +P+ S +E
Sbjct: 1 LEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK 60
Query: 854 KVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEA---SHQDGHVLNWPMRHLIA 910
++H+N+ G ++ +++ + + +P G+L LL+ + + + + ++
Sbjct: 61 HLKHKNIVQYLGSFSENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL- 118
Query: 911 LGVARGLAFLHTSNMVHGDIKPQNVLFDA-DFEAHLSDFGLDRLXXXXXXXXXXXXXXVG 969
GL +LH + +VH DIK NVL + +SDFG + G
Sbjct: 119 ----EGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSK---RLAGINPCTETFTG 171
Query: 970 TLGYVSPEAALTGET--TKESDVYSFGIVLLELLTGKRP 1006
TL Y++PE G K +D++S G ++E+ TGK P
Sbjct: 172 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 10/182 (5%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYA-GAPDLRLLVYDYMPNGNLGTLLQ--EASHQDGHVL 901
F EA + + ++ L G + G P L ++ + M G+L + L+ + + VL
Sbjct: 75 FLNEASVMKEFNCHHVVRLLGVVSQGQPTL--VIMELMTRGDLKSYLRSLRPAMANNPVL 132
Query: 902 NWP-MRHLIALG--VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXX 958
P + +I + +A G+A+L+ + VH D+ +N + DF + DFG+ R
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
Query: 959 XXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVK 1017
+ + ++SPE+ G T SDV+SFG+VL E+ T ++P +E +++
Sbjct: 193 YYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 251
Query: 1018 WV 1019
+V
Sbjct: 252 FV 253
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 9/143 (6%)
Query: 872 DLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
D V +Y+ G+L +Q+ P A +A GL FL + +++ D+K
Sbjct: 415 DRLYFVMEYVNGGDLMYHIQQVGR-----FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLK 469
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
NV+ D++ ++DFG+ + GT Y++PE K D +
Sbjct: 470 LDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWW 526
Query: 992 SFGIVLLELLTGKRPVMFTQDED 1014
+FG++L E+L G+ P +DED
Sbjct: 527 AFGVLLYEMLAGQAPFE-GEDED 548
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 127
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + D GL R
Sbjct: 128 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR------HTDD 177
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor Whi-P180
Length = 484
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 15/196 (7%)
Query: 829 VLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGT 888
V+S R++ + E+L R E + L ++ H N+ L ++ L+ Y G
Sbjct: 58 VISKRQVKQKTDKESLLR-EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTG----GE 112
Query: 889 LLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDA---DFEAHL 945
L E + R I V G+ + H + +VH D+KP+N+L ++ D +
Sbjct: 113 LFDEIISRKRFSEVDAAR--IIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRI 170
Query: 946 SDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKR 1005
DFGL +GT Y++PE L G ++ DV+S G++L LL+G
Sbjct: 171 IDFGL----STHFEASKKXKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCP 225
Query: 1006 PVMFTQDEDIVKWVKK 1021
P + DI+K V+K
Sbjct: 226 PFNGANEYDILKKVEK 241
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +YMP G+L L+ + + ++AL +H+ ++H D+KP N+
Sbjct: 152 MVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDA------IHSMGLIHRDVKPDNM 205
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALT----GETTKESDVY 991
L D L+DFG VGT Y+SPE + G +E D +
Sbjct: 206 LLDKHGHLKLADFGT--CMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWW 263
Query: 992 SFGIVLLELLTGKRP 1006
S G+ L E+L G P
Sbjct: 264 SVGVFLFEMLVGDTP 278
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGH--VLN 902
F EA + + H +L L G +P ++L V MP+G L + E G +LN
Sbjct: 87 FMDEALIMASMDHPHLVRLLGVCL-SPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLN 144
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
W ++ +A+G+ +L +VH D+ +NVL + ++DFGL RL
Sbjct: 145 WCVQ------IAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYN 198
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRP 1006
+ + +++ E + T +SDV+S+G+ + EL+T G +P
Sbjct: 199 ADGGKM-PIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 242
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGH--VLN 902
F EA + + H +L L G +P ++L V MP+G L + E G +LN
Sbjct: 64 FMDEALIMASMDHPHLVRLLGVCL-SPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLN 121
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
W ++ +A+G+ +L +VH D+ +NVL + ++DFGL RL
Sbjct: 122 WCVQ------IAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYN 175
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRP 1006
+ + +++ E + T +SDV+S+G+ + EL+T G +P
Sbjct: 176 ADGGKM-PIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 219
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 18/194 (9%)
Query: 832 IRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNL-GTLL 890
I++ P + ++ E L K++H N+ L Y LV + G L +L
Sbjct: 42 IKKSP--AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHY-YLVMQLVSGGELFDRIL 98
Query: 891 QEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLF---DADFEAHLSD 947
+ + + L+ V + +LH + +VH D+KP+N+L+ + + + ++D
Sbjct: 99 ERGVYTEKDA------SLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITD 152
Query: 948 FGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPV 1007
FGL ++ GT GYV+PE +K D +S G++ LL G P
Sbjct: 153 FGLSKMEQNGIMSTA-----CGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF 207
Query: 1008 MFTQDEDIVKWVKK 1021
+ + + +K+
Sbjct: 208 YEETESKLFEKIKE 221
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 20/196 (10%)
Query: 816 YGLVFKACYN--DGMVLSIRRLPDGSLDENLFRK----EAEFLGKVRHRNLTVLRGYYAG 869
YG+VFK C N G +++I++ + S D+ + +K E L +++H NL L +
Sbjct: 16 YGVVFK-CRNRDTGQIVAIKKFLE-SEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRR 73
Query: 870 APDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGD 929
L L V++Y + T+L E V ++ I + + F H N +H D
Sbjct: 74 KRRLHL-VFEYCDH----TVLHELDRYQRGVPEHLVKS-ITWQTLQAVNFCHKHNCIHRD 127
Query: 930 IKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETT--KE 987
+KP+N+L L DFG RL V T Y SPE L G+T
Sbjct: 128 VKPENILITKHSVIKLCDFGFARL---LTGPSDYYDDEVATRWYRSPE-LLVGDTQYGPP 183
Query: 988 SDVYSFGIVLLELLTG 1003
DV++ G V ELL+G
Sbjct: 184 VDVWAIGCVFAELLSG 199
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 16/187 (8%)
Query: 846 RKEAEFLGKVR-------HRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ--EASHQ 896
R+ EFL + H + +L G P L ++ + M G+L + L+ +
Sbjct: 57 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL--VIMELMTRGDLKSYLRSLRPEME 114
Query: 897 DGHVLNWP-MRHLIALG--VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRL 953
+ VL P + +I + +A G+A+L+ + VH D+ +N DF + DFG+ R
Sbjct: 115 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRD 174
Query: 954 XXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQD 1012
+ + ++SPE+ G T SDV+SFG+VL E+ T ++P +
Sbjct: 175 IYETDYYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 233
Query: 1013 EDIVKWV 1019
E ++++V
Sbjct: 234 EQVLRFV 240
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Amp
Length = 576
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
A + GL LH +V+ D+KP+N+L D +SD GL
Sbjct: 290 FYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL----AVHVPEGQTIKGR 345
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVK 1017
VGT+GY++PE T D ++ G +L E++ G+ P F Q + +K
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP--FQQRKKKIK 393
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
A + GL LH +V+ D+KP+N+L D +SD GL
Sbjct: 290 FYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL----AVHVPEGQTIKGR 345
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVK 1017
VGT+GY++PE T D ++ G +L E++ G+ P F Q + +K
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP--FQQRKKKIK 393
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 56.6 bits (135), Expect = 8e-08, Method: Composition-based stats.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
Query: 798 TVEATRQFDEENVLSRTRYGLVFKACYND-GMVLSIRRLP-DGSLDENLFRKEAEFLGKV 855
T + FD L YG V+KA + + G +++I+++P + L E + KE + +
Sbjct: 24 TKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEII--KEISIMQQC 81
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
++ G Y DL +V +Y G++ +++ + L I +
Sbjct: 82 DSPHVVKYYGSYFKNTDL-WIVMEYCGAGSVSDIIRLRNK----TLTEDEIATILQSTLK 136
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
GL +LH +H DIK N+L + + A L+DFG + +GT +++
Sbjct: 137 GLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFG---VAGQLTDXMAKRNXVIGTPFWMA 193
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
PE +D++S GI +E+ GK P
Sbjct: 194 PEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 13/205 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLR 864
F+ E+ L R +V++ ++ ++D+ + R E L ++ H N+ L+
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLK 114
Query: 865 GYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSN 924
+ ++ L V + + G L + E + ++ ++ +A+LH +
Sbjct: 115 EIFETPTEISL-VLELVTGGELFDRIVEKGYYSERDAADAVKQIL-----EAVAYLHENG 168
Query: 925 MVHGDIKPQNVLFDA---DFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALT 981
+VH D+KP+N+L+ D ++DFGL ++ GT GY +PE
Sbjct: 169 IVHRDLKPENLLYATPAPDAPLKIADFGLSKI----VEHQVLMKTVCGTPGYCAPEILRG 224
Query: 982 GETTKESDVYSFGIVLLELLTGKRP 1006
E D++S GI+ LL G P
Sbjct: 225 CAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ-------EASHQDGHVLNWPMRHL 908
+H+N+ L G L ++V +Y GNL LQ E S+ H P L
Sbjct: 85 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHN---PEEQL 140
Query: 909 -------IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXX 961
A VARG+ +L + +H D+ +NVL D ++DFGL R
Sbjct: 141 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 200
Query: 962 XXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVK 1020
+ + +++PEA T +SDV+SFG++L E+ T G P E++ K +K
Sbjct: 201 KTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 259
Query: 1021 K 1021
+
Sbjct: 260 E 260
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In
Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In
Complex With Arq 069
Length = 306
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ-------EASHQDGHVLNWPMRHL 908
+H+N+ L G L ++V +Y GNL LQ E S+ H P L
Sbjct: 81 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHN---PEEQL 136
Query: 909 -------IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXX 961
A VARG+ +L + +H D+ +NVL D ++DFGL R
Sbjct: 137 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 196
Query: 962 XXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVK 1020
+ + +++PEA T +SDV+SFG++L E+ T G P E++ K +K
Sbjct: 197 KTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 255
Query: 1021 K 1021
+
Sbjct: 256 E 256
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ-------EASHQDGHVLNWPMRHL 908
+H+N+ L G L ++V +Y GNL LQ E S+ H P L
Sbjct: 84 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHN---PEEQL 139
Query: 909 -------IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXX 961
A VARG+ +L + +H D+ +NVL D ++DFGL R
Sbjct: 140 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 199
Query: 962 XXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVK 1020
+ + +++PEA T +SDV+SFG++L E+ T G P E++ K +K
Sbjct: 200 KTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 258
Query: 1021 K 1021
+
Sbjct: 259 E 259
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
Length = 317
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ-------EASHQDGHVLNWPMRHL 908
+H+N+ L G L ++V +Y GNL LQ E S+ H P L
Sbjct: 92 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQAREPPGLEYSYNPSHN---PEEQL 147
Query: 909 -------IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXX 961
A VARG+ +L + +H D+ +NVL D ++DFGL R
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 962 XXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVK 1020
+ + +++PEA T +SDV+SFG++L E+ T G P E++ K +K
Sbjct: 208 KTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 266
Query: 1021 K 1021
+
Sbjct: 267 E 267
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ-------EASHQDGHVLNWPMRHL 908
+H+N+ L G L ++V +Y GNL LQ E S+ H P L
Sbjct: 92 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHN---PEEQL 147
Query: 909 -------IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXX 961
A VARG+ +L + +H D+ +NVL D ++DFGL R
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 962 XXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVK 1020
+ + +++PEA T +SDV+SFG++L E+ T G P E++ K +K
Sbjct: 208 KTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 266
Query: 1021 K 1021
+
Sbjct: 267 E 267
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 20/180 (11%)
Query: 848 EAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLG---TLLQEASHQDGHVLNWP 904
E L ++ H N+ L ++ + L++ Y G L L Q+ S D V+
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYR-GGELFDEIILRQKFSEVDAAVI--- 126
Query: 905 MRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDA---DFEAHLSDFGLDRLXXXXXXXX 961
M+ +++ G +LH N+VH D+KP+N+L ++ D + DFGL
Sbjct: 127 MKQVLS-----GTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS----AHFEVG 177
Query: 962 XXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKK 1021
+GT Y++PE L + ++ DV+S G++L LL G P D++I+K V+K
Sbjct: 178 GKMKERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEK 236
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
Length = 341
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 7/182 (3%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F +E + + HRNL L G P +V + P LG+LL GH L
Sbjct: 62 FIREVNAMHSLDHRNLIRLYGVVLTPP--MKMVTELAP---LGSLLDRLRKHQGHFLLGT 116
Query: 905 MRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXX 964
+ A+ VA G+ +L + +H D+ +N+L + DFGL R
Sbjct: 117 LSRY-AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQ 175
Query: 965 XXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQL 1023
+ +PE+ T + SD + FG+ L E+ T G+ P + I+ + K+
Sbjct: 176 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG 235
Query: 1024 QK 1025
++
Sbjct: 236 ER 237
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 805 FDEENVLSRTRYGLVFKA-CYNDGMVLSIRRLPDGSLDENLFR----KEAEFLGKVRHRN 859
F E + R ++ V++A C DG+ ++++++ L + R KE + L ++ H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 860 LTVLRGYYAGAPDLRL-LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIA--LGVARG 916
V++ Y + D L +V + G+L +++ Q + P R + + +
Sbjct: 94 --VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLI---PERTVWKYFVQLCSA 148
Query: 917 LAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSP 976
L +H+ ++H DIKP NV A L D GL R VGT Y+SP
Sbjct: 149 LEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRF---FSSKTTAAHSLVGTPYYMSP 205
Query: 977 EAALTGETTKESDVYSFGIVLLELLTGKRP 1006
E +SD++S G +L E+ + P
Sbjct: 206 ERIHENGYNFKSDIWSLGCLLYEMAALQSP 235
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 16/218 (7%)
Query: 803 RQFDEENVLSRTRYGLVFKACYNDGM-VLSIRRLPDGSLDENL---FRKEAEFLGKVRHR 858
+++++ + YG VFKA + +++++R+ DE + +E L +++H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 859 NLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQ-DGHVLNWPMRHLIALGVARGL 917
N+ L L LV+++ + +L + D ++ + L+ +GL
Sbjct: 62 NIVRLHDVLHSDKKL-TLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLL-----KGL 114
Query: 918 AFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPE 977
F H+ N++H D+KPQN+L + + E L+DFGL R V TL Y P+
Sbjct: 115 GFCHSRNVLHRDLKPQNLLINRNGELKLADFGLAR---AFGIPVRCYSAEVVTLWYRPPD 171
Query: 978 AALTGETTKES-DVYSFGIVLLELLTGKRPVMFTQDED 1014
+ S D++S G + EL RP+ D D
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVD 209
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 47/167 (28%), Positives = 70/167 (41%), Gaps = 15/167 (8%)
Query: 842 ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR--LLVYDYMPNGNLGTLLQEASHQDGH 899
E+ R+E E + H N+ L Y+ D R L+ +Y P G L LQ++ D
Sbjct: 67 EHQLRREIEIQAHLHHPNILRLYNYFY---DRRRIYLILEYAPRGELYKELQKSCTFDEQ 123
Query: 900 VLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXX 959
M L A L + H ++H DIKP+N+L E ++DFG
Sbjct: 124 RTATIMEEL-----ADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWS-----VHA 173
Query: 960 XXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
GTL Y+ PE ++ D++ G++ ELL G P
Sbjct: 174 PSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFR---KEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L T + +AS G + P+ + +GLAF
Sbjct: 68 VKLLDVIHTENKL-YLVFEFL-HQDLKTFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 122
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KPQN+L + + L+DFGL R V TL Y +PE L
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 213
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 909 IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGL---------DRLXXXXXX 959
I L +A + FLH+ ++H D+KP N+ F D + DFGL ++
Sbjct: 123 IFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 182
Query: 960 XXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELL 1001
VGT Y+SPE + + D++S G++L ELL
Sbjct: 183 AYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 848 EAEFLGKV-RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ-----------EASH 895
E E + + +H+N+ L G L ++V +Y GNL LQ SH
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEFSFNPSH 141
Query: 896 QDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXX 955
L+ A VARG+ +L + +H D+ +NVL D ++DFGL R
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 201
Query: 956 XXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDED 1014
+ + +++PEA T +SDV+SFG++L E+ T G P E+
Sbjct: 202 HIDXXKKTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 260
Query: 1015 IVKWVKK 1021
+ K +K+
Sbjct: 261 LFKLLKE 267
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 18/161 (11%)
Query: 852 LGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHV-----LNWPMR 906
+G + H ++ L G G+ LV Y+P LG+LL G + LNW ++
Sbjct: 69 IGSLDHAHIVRLLGLCPGSS--LQLVTQYLP---LGSLLDHVRQHRGALGPQLLLNWGVQ 123
Query: 907 HLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXX 966
+A+G+ +L MVH ++ +NVL + + ++DFG+ L
Sbjct: 124 ------IAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEA 177
Query: 967 XVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRP 1006
+ +++ E+ G+ T +SDV+S+G+ + EL+T G P
Sbjct: 178 KT-PIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 217
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 17/163 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLVYDYMPNGNLGTLLQEASHQDGHVLN 902
+E L ++H N+ L + A L + + ++ +L +++ D HV
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV-- 127
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ + RGL ++H+++++H D+KP N+ + D E + DF L R
Sbjct: 128 ----QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR------HTDD 177
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L ++ D++S G ++ ELLTG+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 24/191 (12%)
Query: 846 RKEAEFL-------GKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ----EAS 894
R+ EFL G H + +L G P L +V + M +G+L + L+ EA
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL--VVMELMAHGDLKSYLRSLRPEAE 119
Query: 895 HQDGHVLNWP---MRHLIALG--VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFG 949
+ G P ++ +I + +A G+A+L+ VH D+ +N + DF + DFG
Sbjct: 120 NNPGR----PPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG 175
Query: 950 LDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVM 1008
+ R + + +++PE+ G T SD++SFG+VL E+ + ++P
Sbjct: 176 MTRDIYETAYYRKGGKGLL-PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ 234
Query: 1009 FTQDEDIVKWV 1019
+E ++K+V
Sbjct: 235 GLSNEQVLKFV 245
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound
To Novel Bosutinib Isoform 1, Previously Thought To Be
Bosutinib
Length = 293
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 17/199 (8%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENL--FRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+G V+KA + L+ ++ + +E L + E E L H + L G Y L
Sbjct: 24 FGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKL 83
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
+++ ++ P G + ++ E L P ++ + L FLH+ ++H D+K
Sbjct: 84 WIMI-EFCPGGAVDAIMLELDRG----LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAG 138
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKES----- 988
NVL + + L+DFG+ +GT +++PE + ET K++
Sbjct: 139 NVLMTLEGDIRLADFGVS---AKNLKTLQKRDSFIGTPYWMAPEVVMC-ETMKDTPYDYK 194
Query: 989 -DVYSFGIVLLELLTGKRP 1006
D++S GI L+E+ + P
Sbjct: 195 ADIWSLGITLIEMAQIEPP 213
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound
To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 (Lok)
Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10 (Lok)
Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 17/199 (8%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENL--FRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+G V+KA + L+ ++ + +E L + E E L H + L G Y L
Sbjct: 32 FGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKL 91
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
+++ ++ P G + ++ E L P ++ + L FLH+ ++H D+K
Sbjct: 92 WIMI-EFCPGGAVDAIMLELDRG----LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAG 146
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKES----- 988
NVL + + L+DFG+ +GT +++PE + ET K++
Sbjct: 147 NVLMTLEGDIRLADFGVS---AKNLKTLQKRDSFIGTPYWMAPEVVMC-ETMKDTPYDYK 202
Query: 989 -DVYSFGIVLLELLTGKRP 1006
D++S GI L+E+ + P
Sbjct: 203 ADIWSLGITLIEMAQIEPP 221
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With A Bisubstrate Inhibitor
Length = 306
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 24/191 (12%)
Query: 846 RKEAEFL-------GKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ----EAS 894
R+ EFL G H + +L G P L +V + M +G+L + L+ EA
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL--VVMELMAHGDLKSYLRSLRPEAE 119
Query: 895 HQDGHVLNWP---MRHLIALG--VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFG 949
+ G P ++ +I + +A G+A+L+ VH D+ +N + DF + DFG
Sbjct: 120 NNPGR----PPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG 175
Query: 950 LDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVM 1008
+ R + + +++PE+ G T SD++SFG+VL E+ + ++P
Sbjct: 176 MTRDIXETDXXRKGGKGLL-PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ 234
Query: 1009 FTQDEDIVKWV 1019
+E ++K+V
Sbjct: 235 GLSNEQVLKFV 245
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 14/178 (7%)
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ-----------EASHQDGHVLNWP 904
+H+N+ L G L ++V +Y GNL LQ SH L+
Sbjct: 77 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 135
Query: 905 MRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXX 964
A VARG+ +L + +H D+ +NVL D ++DFGL R
Sbjct: 136 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 195
Query: 965 XXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
+ + +++PEA T +SDV+SFG++L E+ T G P E++ K +K+
Sbjct: 196 NGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 252
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 17/183 (9%)
Query: 846 RKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPM 905
R+E + L RH ++ L + D+ +V +Y+ G L + ++G +
Sbjct: 64 RREIQNLKLFRHPHIIKLYQVISTPSDI-FMVMEYVSGGELFDYIC----KNGRLDEKES 118
Query: 906 RHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXX 965
R L + G+ + H +VH D+KP+NVL DA A ++DFGL +
Sbjct: 119 RRLFQ-QILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNM----MSDGEFLR 173
Query: 966 XXVGTLGYVSPEAALTGETTK--ESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQL 1023
G+ Y +PE ++G E D++S G++L LL G P D+D V + K++
Sbjct: 174 XSCGSPNYAAPE-VISGRLYAGPEVDIWSSGVILYALLCGTLPF----DDDHVPTLFKKI 228
Query: 1024 QKG 1026
G
Sbjct: 229 CDG 231
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In Complex
With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The Insulin
Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The Insulin
Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Phosphopeptide
Length = 306
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 24/192 (12%)
Query: 845 FRKEAEFL-------GKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ----EA 893
R+ EFL G H + +L G P L +V + M +G+L + L+ EA
Sbjct: 61 LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL--VVMELMAHGDLKSYLRSLRPEA 118
Query: 894 SHQDGHVLNWP---MRHLIALG--VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDF 948
+ G P ++ +I + +A G+A+L+ VH D+ +N + DF + DF
Sbjct: 119 ENNPGR----PPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDF 174
Query: 949 GLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPV 1007
G+ R + + +++PE+ G T SD++SFG+VL E+ + ++P
Sbjct: 175 GMTRDIXETDXXRKGGKGLL-PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 233
Query: 1008 MFTQDEDIVKWV 1019
+E ++K+V
Sbjct: 234 QGLSNEQVLKFV 245
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 14/178 (7%)
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ-----------EASHQDGHVLNWP 904
+H+N+ L G L ++V +Y GNL LQ SH L+
Sbjct: 92 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 150
Query: 905 MRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXX 964
A VARG+ +L + +H D+ +NVL D ++DFGL R
Sbjct: 151 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 965 XXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
+ + +++PEA T +SDV+SFG++L E+ T G P E++ K +K+
Sbjct: 211 NGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 267
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 24/192 (12%)
Query: 845 FRKEAEFL-------GKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ----EA 893
R+ EFL G H + +L G P L +V + M +G+L + L+ EA
Sbjct: 58 LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL--VVMELMAHGDLKSYLRSLRPEA 115
Query: 894 SHQDGHVLNWP---MRHLIALG--VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDF 948
+ G P ++ +I + +A G+A+L+ VH D+ +N + DF + DF
Sbjct: 116 ENNPGR----PPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDF 171
Query: 949 GLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPV 1007
G+ R + + +++PE+ G T SD++SFG+VL E+ + ++P
Sbjct: 172 GMTRDIXETDXXRKGGKGLL-PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 230
Query: 1008 MFTQDEDIVKWV 1019
+E ++K+V
Sbjct: 231 QGLSNEQVLKFV 242
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With
Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex With
Amp-Pnp
Length = 344
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 18/161 (11%)
Query: 852 LGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHV-----LNWPMR 906
+G + H ++ L G G+ LV Y+P LG+LL G + LNW ++
Sbjct: 87 IGSLDHAHIVRLLGLCPGSS--LQLVTQYLP---LGSLLDHVRQHRGALGPQLLLNWGVQ 141
Query: 907 HLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXX 966
+A+G+ +L MVH ++ +NVL + + ++DFG+ L
Sbjct: 142 ------IAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEA 195
Query: 967 XVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRP 1006
+ +++ E+ G+ T +SDV+S+G+ + EL+T G P
Sbjct: 196 KT-PIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 235
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Query: 875 LLVYDYMPNGNLGTLLQEASH-QDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
+LV + G L LQ+ H +D +++ + V+ G+ +L SN VH D+ +
Sbjct: 445 MLVMEMAELGPLNKYLQQNRHVKDKNIIE------LVHQVSMGMKYLEESNFVHRDLAAR 498
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
NVL A +SDFGL + + + +PE + + +SDV+SF
Sbjct: 499 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 558
Query: 994 GIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
G+++ E + G++P + ++ ++K
Sbjct: 559 GVLMWEAFSYGQKPYRGMKGSEVTAMLEK 587
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human
Insulin Receptor
Length = 306
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 24/191 (12%)
Query: 846 RKEAEFL-------GKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ----EAS 894
R+ EFL G H + +L G P L +V + M +G+L + L+ EA
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL--VVMELMAHGDLKSYLRSLRPEAE 119
Query: 895 HQDGHVLNWP---MRHLIALG--VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFG 949
+ G P ++ +I + +A G+A+L+ VH D+ +N + DF + DFG
Sbjct: 120 NNPGR----PPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG 175
Query: 950 LDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVM 1008
+ R + + +++PE+ G T SD++SFG+VL E+ + ++P
Sbjct: 176 MTRDIYETDYYRKGGKGLL-PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ 234
Query: 1009 FTQDEDIVKWV 1019
+E ++K+V
Sbjct: 235 GLSNEQVLKFV 245
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 73/168 (43%), Gaps = 14/168 (8%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL-LVYDYMPNGNLGTLLQEASHQDGHVLNW 903
FR+E + L + +T L +YA + L LV DY G+L TLL + + L
Sbjct: 121 FREERDVLVNGDCQWITAL--HYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK----LPE 174
Query: 904 PMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXX 963
M + + +H + VH DIKP NVL D + L+DFG
Sbjct: 175 DMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQ 232
Query: 964 XXXXVGTLGYVSPEAALT-----GETTKESDVYSFGIVLLELLTGKRP 1006
VGT Y+SPE G+ E D +S G+ + E+L G+ P
Sbjct: 233 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 856 RHRNLTVLRGYYA-GAPDLRLLVYDYMPNGNLGTLLQEASH-----QDGHVLNWPMRHLI 909
+H N+ L G G P L++ +Y G+L L+ + +DG L +R L+
Sbjct: 100 QHENIVNLLGACTHGGP--VLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE--LRDLL 155
Query: 910 ALG--VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
VA+G+AFL + N +H D+ +NVL A + DFGL R
Sbjct: 156 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 215
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +++PE+ T +SDV+S+GI+L E+ +
Sbjct: 216 L-PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860
Length = 467
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 20/180 (11%)
Query: 848 EAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLG---TLLQEASHQDGHVLNWP 904
E L ++ H N+ L ++ + L++ Y G L L Q+ S D V+
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVY-RGGELFDEIILRQKFSEVDAAVI--- 109
Query: 905 MRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDA---DFEAHLSDFGLDRLXXXXXXXX 961
M+ +++ G +LH N+VH D+KP+N+L ++ D + DFGL
Sbjct: 110 MKQVLS-----GTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGL----SAHFEVG 160
Query: 962 XXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKK 1021
+GT Y++PE L + ++ DV+S G++L LL G P D++I+K V+K
Sbjct: 161 GKMKERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEK 219
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 839 SLDENLFRKEAEFLGKVRHRNLTVLRGYYAG--APDLRLLVYDYMPNGNLGTLLQ----E 892
S+DE L KE + + + H N+ YY D LV + G++ +++ +
Sbjct: 51 SMDELL--KEIQAMSQCHHPNIV---SYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAK 105
Query: 893 ASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR 952
H+ G VL+ I V GL +LH + +H D+K N+L D ++DFG+
Sbjct: 106 GEHKSG-VLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSA 164
Query: 953 LXXX--XXXXXXXXXXXVGTLGYVSPEA--ALTGETTKESDVYSFGIVLLELLTGKRP 1006
VGT +++PE + G K +D++SFGI +EL TG P
Sbjct: 165 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFK-ADIWSFGITAIELATGAAP 221
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 839 SLDENLFRKEAEFLGKVRHRNLTVLRGYYAG--APDLRLLVYDYMPNGNLGTLLQ----E 892
S+DE L KE + + + H N+ YY D LV + G++ +++ +
Sbjct: 56 SMDELL--KEIQAMSQCHHPNIV---SYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAK 110
Query: 893 ASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR 952
H+ G VL+ I V GL +LH + +H D+K N+L D ++DFG+
Sbjct: 111 GEHKSG-VLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSA 169
Query: 953 LXXX--XXXXXXXXXXXVGTLGYVSPEA--ALTGETTKESDVYSFGIVLLELLTGKRP 1006
VGT +++PE + G K +D++SFGI +EL TG P
Sbjct: 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFK-ADIWSFGITAIELATGAAP 226
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 22/203 (10%)
Query: 825 NDGMVLSIRRLPDGSLDE---NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLV 877
+DG +L + L GS+ E + E L +++H N+ YY D +V
Sbjct: 29 SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV---RYYDRIIDRTNTTLYIV 85
Query: 878 YDYMPNGNLGTLLQEASHQDGHV-LNWPMRHLIALGVARGLAFLHTSN-----MVHGDIK 931
+Y G+L +++ + + + ++ + +R + L +A L H + ++H D+K
Sbjct: 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA--LKECHRRSDGGHTVLHRDLK 143
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
P NV D L DFGL R+ VGT Y+SPE ++SD++
Sbjct: 144 PANVFLDGKQNVKLGDFGLARI---LNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIW 200
Query: 992 SFGIVLLELLTGKRP-VMFTQDE 1013
S G +L EL P F+Q E
Sbjct: 201 SLGCLLYELCALMPPFTAFSQKE 223
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Query: 875 LLVYDYMPNGNLGTLLQEASH-QDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
+LV + G L LQ+ H +D +++ + V+ G+ +L SN VH D+ +
Sbjct: 446 MLVMEMAELGPLNKYLQQNRHVKDKNIIE------LVHQVSMGMKYLEESNFVHRDLAAR 499
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
NVL A +SDFGL + + + +PE + + +SDV+SF
Sbjct: 500 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 559
Query: 994 GIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
G+++ E + G++P + ++ ++K
Sbjct: 560 GVLMWEAFSYGQKPYRGMKGSEVTAMLEK 588
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 22/203 (10%)
Query: 825 NDGMVLSIRRLPDGSLDE---NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLV 877
+DG +L + L GS+ E + E L +++H N+ YY D +V
Sbjct: 29 SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV---RYYDRIIDRTNTTLYIV 85
Query: 878 YDYMPNGNLGTLLQEASHQDGHV-LNWPMRHLIALGVARGLAFLHTSN-----MVHGDIK 931
+Y G+L +++ + + + ++ + +R + L +A L H + ++H D+K
Sbjct: 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA--LKECHRRSDGGHTVLHRDLK 143
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
P NV D L DFGL R+ VGT Y+SPE ++SD++
Sbjct: 144 PANVFLDGKQNVKLGDFGLARI---LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIW 200
Query: 992 SFGIVLLELLTGKRP-VMFTQDE 1013
S G +L EL P F+Q E
Sbjct: 201 SLGCLLYELCALMPPFTAFSQKE 223
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 73/168 (43%), Gaps = 14/168 (8%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL-LVYDYMPNGNLGTLLQEASHQDGHVLNW 903
FR+E + L + +T L +YA + L LV DY G+L TLL + + L
Sbjct: 137 FREERDVLVNGDCQWITAL--HYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK----LPE 190
Query: 904 PMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXX 963
M + + +H + VH DIKP NVL D + L+DFG
Sbjct: 191 DMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQ 248
Query: 964 XXXXVGTLGYVSPEAALT-----GETTKESDVYSFGIVLLELLTGKRP 1006
VGT Y+SPE G+ E D +S G+ + E+L G+ P
Sbjct: 249 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 18/215 (8%)
Query: 808 ENVLSRTRYGLVFKACYNDGMVL--SIRRLPDGSL-DENLFRKEAEFLGKVRHRNLTVLR 864
EN + R +G V K G + + +++P + D + F++E E + + H N+ L
Sbjct: 31 ENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLY 89
Query: 865 GYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSN 924
+ D+ L+ M G L + H+ V I V +A+ H N
Sbjct: 90 ETFEDNTDIYLV----MELCTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHKLN 143
Query: 925 MVHGDIKPQNVLF---DADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALT 981
+ H D+KP+N LF D L DFGL VGT YVSP+ L
Sbjct: 144 VAHRDLKPENFLFLTDSPDSPLKLIDFGL----AARFKPGKMMRTKVGTPYYVSPQ-VLE 198
Query: 982 GETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIV 1016
G E D +S G+++ LL G P D +++
Sbjct: 199 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVM 233
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 24/192 (12%)
Query: 845 FRKEAEFL-------GKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ----EA 893
R+ EFL G H + +L G P L +V + M +G+L + L+ EA
Sbjct: 60 LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL--VVMELMAHGDLKSYLRSLRPEA 117
Query: 894 SHQDGHVLNWP---MRHLIALG--VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDF 948
+ G P ++ +I + +A G+A+L+ VH D+ +N + DF + DF
Sbjct: 118 ENNPGR----PPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDF 173
Query: 949 GLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPV 1007
G+ R + + +++PE+ G T SD++SFG+VL E+ + ++P
Sbjct: 174 GMTRDIYETDYYRKGGKGLL-PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 232
Query: 1008 MFTQDEDIVKWV 1019
+E ++K+V
Sbjct: 233 QGLSNEQVLKFV 244
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 13/192 (6%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENLFR---KEAEFLGKVRHRNLTVLRGYYAGAPD 872
YG+V+KA N G +++++ DE + +E L +++H N+ L
Sbjct: 15 YGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKR 74
Query: 873 LRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKP 932
L +LV++++ + +L LL +G + + + + L + G+A+ H ++H D+KP
Sbjct: 75 L-VLVFEHL-DQDLKKLLDVC---EGGLESVTAKSFL-LQLLNGIAYCHDRRVLHRDLKP 128
Query: 933 QNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKES-DVY 991
QN+L + + E ++DFGL R V TL Y +P+ + + + D++
Sbjct: 129 QNLLINREGELKIADFGLAR---AFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 992 SFGIVLLELLTG 1003
S G + E++ G
Sbjct: 186 SVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 13/192 (6%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENLFR---KEAEFLGKVRHRNLTVLRGYYAGAPD 872
YG+V+KA N G +++++ DE + +E L +++H N+ L
Sbjct: 15 YGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKR 74
Query: 873 LRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKP 932
L +LV++++ + +L LL +G + + + + L + G+A+ H ++H D+KP
Sbjct: 75 L-VLVFEHL-DQDLKKLLDVC---EGGLESVTAKSFL-LQLLNGIAYCHDRRVLHRDLKP 128
Query: 933 QNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKES-DVY 991
QN+L + + E ++DFGL R V TL Y +P+ + + + D++
Sbjct: 129 QNLLINREGELKIADFGLAR---AFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 992 SFGIVLLELLTG 1003
S G + E++ G
Sbjct: 186 SVGCIFAEMVNG 197
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 909 IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXV 968
+ L V R L++LH ++H DIK ++L +D LSDFG V
Sbjct: 146 VCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFG---FCAQVSKEVPKRKXLV 202
Query: 969 GTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
GT +++PE E D++S GI+++E++ G+ P
Sbjct: 203 GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFR---KEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L T + +AS G + P+ + +GLAF
Sbjct: 64 VKLLDVIHTENKL-YLVFEHV-HQDLKTFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 118
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KPQN+L + + L+DFGL R V TL Y +PE L
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 209
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 856 RHRNLTVLRGYYA-GAPDLRLLVYDYMPNGNLGTLLQEASH-----QDGHVLNWPMRHLI 909
+H N+ L G G P L++ +Y G+L L+ + +DG L +R L+
Sbjct: 108 QHENIVNLLGACTHGGP--VLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE--LRDLL 163
Query: 910 ALG--VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
VA+G+AFL + N +H D+ +NVL A + DFGL R
Sbjct: 164 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 223
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +++PE+ T +SDV+S+GI+L E+ +
Sbjct: 224 L-PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 915 RGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
RGL FLH + +VH D+KP+N+L + L+DFGL R+ V TL Y
Sbjct: 131 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI----YSYQMALTPVVVTLWYR 186
Query: 975 SPEAALTGETTKESDVYSFGIVLLELLTGK 1004
+PE L D++S G + E+ K
Sbjct: 187 APEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 94 LIMQLMPFGXLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 145
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFGL +L V + +++ E+ L T +SDV+
Sbjct: 146 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 204
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 205 SYGVTVWELMTFGSKP 220
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of 8-Anilino-1-Naphthalene
Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 103/221 (46%), Gaps = 15/221 (6%)
Query: 800 EATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFR---KEAEFLGKV 855
E F + + YG+V+KA G V++++++ + E + +E L ++
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
H N+ L L LV++++ + +L + +AS G + P+ + +
Sbjct: 67 NHPNIVKLLDVIHTENKL-YLVFEFL-HQDLKKFM-DASALTG--IPLPLIKSYLFQLLQ 121
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
GLAF H+ ++H D+KPQN+L + + L+DFGL R V TL Y +
Sbjct: 122 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEVVTLWYRA 178
Query: 976 PEAALTGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
PE L + + D++S G + E++T R +F D +I
Sbjct: 179 PEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 217
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 915 RGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
RGL FLH + +VH D+KP+N+L + L+DFGL R+ V TL Y
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI----YSYQMALAPVVVTLWYR 178
Query: 975 SPEAALTGETTKESDVYSFGIVLLELLTGK 1004
+PE L D++S G + E+ K
Sbjct: 179 APEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 26/129 (20%)
Query: 909 IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGL---------DRLXXXXXX 959
I + +A + FLH+ ++H D+KP N+ F D + DFGL ++
Sbjct: 169 IFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 228
Query: 960 XXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTG---------------- 1003
VGT Y+SPE + + D++S G++L ELL
Sbjct: 229 AYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRN 288
Query: 1004 -KRPVMFTQ 1011
K P++FTQ
Sbjct: 289 LKFPLLFTQ 297
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein
Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain)
Length = 276
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 16/178 (8%)
Query: 846 RKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPM 905
++E + L RH ++ L + D +V +Y+ G L + + G V
Sbjct: 59 KREIQNLKLFRHPHIIKLYQVISTPTDF-FMVMEYVSGGELFDYIC----KHGRVEEMEA 113
Query: 906 RHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXX 965
R L + + + H +VH D+KP+NVL DA A ++DFGL +
Sbjct: 114 RRLFQ-QILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNM----MSDGEFLR 168
Query: 966 XXVGTLGYVSPEAALTGE--TTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKK 1021
G+ Y +PE ++G E D++S G++L LL G P DE + KK
Sbjct: 169 TSCGSPNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLPF---DDEHVPTLFKK 222
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand Complex
Length = 288
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/192 (24%), Positives = 94/192 (48%), Gaps = 13/192 (6%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENLFR---KEAEFLGKVRHRNLTVLRGYYAGAPD 872
YG+V+KA N G +++++ DE + +E L +++H N+ L
Sbjct: 15 YGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKR 74
Query: 873 LRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKP 932
L +LV++++ + +L LL +G + + + + L + G+A+ H ++H D+KP
Sbjct: 75 L-VLVFEHL-DQDLKKLLDVC---EGGLESVTAKSFL-LQLLNGIAYCHDRRVLHRDLKP 128
Query: 933 QNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKES-DVY 991
QN+L + + E ++DFGL R + TL Y +P+ + + + D++
Sbjct: 129 QNLLINREGELKIADFGLAR---AFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 992 SFGIVLLELLTG 1003
S G + E++ G
Sbjct: 186 SVGCIFAEMVNG 197
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 103/221 (46%), Gaps = 15/221 (6%)
Query: 800 EATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFR---KEAEFLGKV 855
E F + + YG+V+KA G V++++++ + E + +E L ++
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
H N+ L L LV++++ + +L + +AS G + P+ + +
Sbjct: 67 NHPNIVKLLDVIHTENKL-YLVFEFL-HQDLKKFM-DASALTG--IPLPLIKSYLFQLLQ 121
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
GLAF H+ ++H D+KPQN+L + + L+DFGL R V TL Y +
Sbjct: 122 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEVVTLWYRA 178
Query: 976 PEAALTGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
PE L + + D++S G + E++T R +F D +I
Sbjct: 179 PEILLGXKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 217
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 93 LITQLMPFGXLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 144
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFGL +L V + +++ E+ L T +SDV+
Sbjct: 145 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 203
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 204 SYGVTVWELMTFGSKP 219
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 10/159 (6%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMR 906
+E L ++H N+ L + A LR Y+ + T LQ+ G +
Sbjct: 90 RELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM---GMEFSEEKI 146
Query: 907 HLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXX 966
+ + +GL ++H++ +VH D+KP N+ + D E + DFGL R
Sbjct: 147 QYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR------HADAEMTG 200
Query: 967 XVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L+ ++ D++S G ++ E+LTGK
Sbjct: 201 YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 62/156 (39%), Gaps = 11/156 (7%)
Query: 860 LTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAF 919
V Y PD + D M G+L L Q G MR A + GL
Sbjct: 252 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS----QHGVFSEADMR-FYAAEIILGLEH 306
Query: 920 LHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAA 979
+H +V+ D+KP N+L D +SD GL VGT GY++PE
Sbjct: 307 MHNRFVVYRDLKPANILLDEHGHVRISDLGL-----ACDFSKKKPHASVGTHGYMAPEVL 361
Query: 980 LTGETTKES-DVYSFGIVLLELLTGKRPVMFTQDED 1014
G S D +S G +L +LL G P + +D
Sbjct: 362 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 397
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 826 DGMVLSIRRLPDGSLDENL--FRKEAEFLGKV-RHRNLTVLRGYYAGAPDLRLLVYDYMP 882
+ + ++++ L D + +E+L E E + + +H+N+ L G L ++V +Y
Sbjct: 66 EAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYAS 124
Query: 883 NGNLGTLLQ-------EASHQDGHVLNWPM--RHLIA--LGVARGLAFLHTSNMVHGDIK 931
GNL L+ E S+ V M + L++ +ARG+ +L + +H D+
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA 184
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL + ++DFGL R + + +++PEA T +SDV+
Sbjct: 185 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVW 243
Query: 992 SFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
SFG+++ E+ T G P E++ K +K+
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 62/156 (39%), Gaps = 11/156 (7%)
Query: 860 LTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAF 919
V Y PD + D M G+L L Q G MR A + GL
Sbjct: 253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS----QHGVFSEADMR-FYAAEIILGLEH 307
Query: 920 LHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAA 979
+H +V+ D+KP N+L D +SD GL VGT GY++PE
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGL-----ACDFSKKKPHASVGTHGYMAPEVL 362
Query: 980 LTGETTKES-DVYSFGIVLLELLTGKRPVMFTQDED 1014
G S D +S G +L +LL G P + +D
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 22/203 (10%)
Query: 825 NDGMVLSIRRLPDGSLDE---NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR----LLV 877
+DG +L + L GS+ E + E L +++H N+ YY D +V
Sbjct: 29 SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV---RYYDRIIDRTNTTLYIV 85
Query: 878 YDYMPNGNLGTLLQEASHQDGHV-LNWPMRHLIALGVARGLAFLHTSN-----MVHGDIK 931
+Y G+L +++ + + + ++ + +R + L +A L H + ++H D+K
Sbjct: 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA--LKECHRRSDGGHTVLHRDLK 143
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
P NV D L DFGL R+ VGT Y+SPE ++SD++
Sbjct: 144 PANVFLDGKQNVKLGDFGLARI---LNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIW 200
Query: 992 SFGIVLLELLTGKRP-VMFTQDE 1013
S G +L EL P F+Q E
Sbjct: 201 SLGCLLYELCALMPPFTAFSQKE 223
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/193 (24%), Positives = 88/193 (45%), Gaps = 17/193 (8%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENL--FRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+G V+KA + VL+ ++ D +E L + E + L H N+ L + +L
Sbjct: 50 FGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNL 109
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
+L+ ++ G + ++ E L ++ L +LH + ++H D+K
Sbjct: 110 WILI-EFCAGGAVDAVMLELERP----LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 164
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKE------ 987
N+LF D + L+DFG+ +GT +++PE + ET+K+
Sbjct: 165 NILFTLDGDIKLADFGVS---AKNTRTIQRRDSFIGTPYWMAPEVVMC-ETSKDRPYDYK 220
Query: 988 SDVYSFGIVLLEL 1000
+DV+S GI L+E+
Sbjct: 221 ADVWSLGITLIEM 233
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 14/167 (8%)
Query: 843 NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLN 902
N+F KE + + + H L L + D+ +V D + G+L LQ+ H +
Sbjct: 61 NVF-KELQIMQGLEHPFLVNLWYSFQDEEDM-FMVVDLLLGGDLRYHLQQNVHFKEETVK 118
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
L + L +L ++H D+KP N+L D H++DF +
Sbjct: 119 -----LFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNI----AAMLPRET 169
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES---DVYSFGIVLLELLTGKRP 1006
GT Y++PE + + S D +S G+ ELL G+RP
Sbjct: 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 10/167 (5%)
Query: 848 EAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRH 907
E+ L RH LT L+ Y D V +Y N G L S + V
Sbjct: 58 ESRVLQNTRHPFLTALK-YAFQTHDRLCFVMEY---ANGGELFFHLSRE--RVFTEERAR 111
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ L +LH+ ++V+ DIK +N++ D D ++DFGL +
Sbjct: 112 FYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTF 168
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDED 1014
GT Y++PE + + D + G+V+ E++ G+ P + QD +
Sbjct: 169 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP-FYNQDHE 214
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 10/167 (5%)
Query: 848 EAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRH 907
E+ L RH LT L+ Y D V +Y N G L S + V
Sbjct: 55 ESRVLQNTRHPFLTALK-YAFQTHDRLCFVMEY---ANGGELFFHLSRE--RVFTEERAR 108
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ L +LH+ ++V+ DIK +N++ D D ++DFGL +
Sbjct: 109 FYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTF 165
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDED 1014
GT Y++PE + + D + G+V+ E++ G+ P + QD +
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP-FYNQDHE 211
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 10/167 (5%)
Query: 848 EAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRH 907
E+ L RH LT L+ Y D V +Y N G L S + V
Sbjct: 55 ESRVLQNTRHPFLTALK-YAFQTHDRLCFVMEY---ANGGELFFHLSRE--RVFTEERAR 108
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ L +LH+ ++V+ DIK +N++ D D ++DFGL +
Sbjct: 109 FYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTF 165
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDED 1014
GT Y++PE + + D + G+V+ E++ G+ P + QD +
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP-FYNQDHE 211
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 16/193 (8%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENL--FRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+G V+KA + VL+ ++ D +E L + E + L H N+ L + +L
Sbjct: 23 FGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNL 82
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
+L+ ++ G + ++ E L ++ L +LH + ++H D+K
Sbjct: 83 WILI-EFCAGGAVDAVMLELERP----LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 137
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKE------ 987
N+LF D + L+DFG+ +GT +++PE + ET+K+
Sbjct: 138 NILFTLDGDIKLADFGVS--AKNTRTXIQRRDSFIGTPYWMAPEVVMC-ETSKDRPYDYK 194
Query: 988 SDVYSFGIVLLEL 1000
+DV+S GI L+E+
Sbjct: 195 ADVWSLGITLIEM 207
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 138/566 (24%), Positives = 227/566 (40%), Gaps = 82/566 (14%)
Query: 153 EIANDLPRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSR-EVPATFEGTLPSA 211
EI + LP + + S N +PT I N + +LIN F +R ++ E T S
Sbjct: 25 EIPDTLPNTTEVLEFSFNF----LPT-IQNTTFSRLINLIFLDLTRCQINWVHEDTFQSH 79
Query: 212 IANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGV--VPASMFCNVSGYPP 269
L + GN L + ++ L+ + L Q +S + +P N+
Sbjct: 80 ----HQLNTIVLTGNPLIFMAETSLTGPKFLKHLFLTQTGISNLEFIPVHNLENLES--- 132
Query: 270 SIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTLT-------R 322
+ LG N +++ PE + L+VLD Q N I +++R T +
Sbjct: 133 ----LHLGSNHISSINLPENFPTQN-LKVLDFQNNAIH-----YISRKDTNSLEQATNLS 182
Query: 323 LDVSGNSISGKIP-AQIGGLWRLEELKMANNSFGGAVPVEIK----QCSSLSLL------ 371
L+ +GN I G P A I ++ + LK FGG++ + I Q S+L L
Sbjct: 183 LNFNGNDIKGIEPGAFISKIF--QSLK-----FGGSLNLFIIFKGLQNSTLQSLWLGTFE 235
Query: 372 DLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLP 431
D + + E L D+ ++S+ L + FS ++FR ++ L+L L+G LP
Sbjct: 236 DTDDQYLTSATFEGLCDM-SVESINLQKHRFSDLSSSTFRCFTRVQELDLTAAHLNG-LP 293
Query: 432 EEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPAXXXXXXXXXXX 491
+ GMN+L L L+ N F + + L + GN +
Sbjct: 294 SGIEGMNSLKKLVLNANSFDQLCQINAASFPSLRDLYIKGNMRKLDLGTRC--------- 344
Query: 492 XXXXQNFSGELPIELAGLPNLQVIALQENKL--SGNVPEGFSSLMSLRYLNLSFNGFVGQ 549
L L NLQ + L + + S +L L+YLNLS+N +G
Sbjct: 345 --------------LEKLENLQKLDLSHSDIEASDCCNLQLKNLRHLQYLNLSYNEPLGL 390
Query: 550 IPATXXXXXXXXXXXXXGNHISGSIPPE-LGNCSDLEVLELRS---NSLTGHIPTDISHL 605
H+ P N L VL L ++ H+ + L
Sbjct: 391 EDQAFKECPQLELLDVAFTHLHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHLLAGLQDL 450
Query: 606 SHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANN 665
HLN+ S + + + + SL L+++S +L + L N+ LDLS N+
Sbjct: 451 RHLNLQGNSFQDGSISKTNLLQMVGSLEILILSSCNLLSIDQQAFHGLRNVNHLDLSHNS 510
Query: 666 LSGEIPANLSSIFGLMNFNVSSNNLQ 691
L+G+ LS + GL N++SNN++
Sbjct: 511 LTGDSMDALSHLKGLY-LNMASNNIR 535
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 105/492 (21%), Positives = 184/492 (37%), Gaps = 38/492 (7%)
Query: 71 LRLPRLQLSGRISDHLSNLRMLRKLSLRSNSFNGTIPATLAQCTLLRAVFLQYNSLSGNL 130
L L R Q++ D + L + L N +L L+ +FL +S
Sbjct: 61 LDLTRCQINWVHEDTFQSHHQLNTIVLTGNPLIFMAETSLTGPKFLKHLFLTQTGISNLE 120
Query: 131 PANIGNLSNLEILNVAANRLSG-EIANDLP-RNLKYFDLSSNGFSGPIPTSISNLSQLQL 188
+ NL NLE L++ +N +S + + P +NLK D +N ++L Q
Sbjct: 121 FIPVHNLENLESLHLGSNHISSINLPENFPTQNLKVLDFQNNAIHYISRKDTNSLEQATN 180
Query: 189 INFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAI-------GALPK 241
++ +FN ++ G S I Q GG + I L
Sbjct: 181 LSLNFN--GNDIKGIEPGAFISKI----------FQSLKFGGSLNLFIIFKGLQNSTLQS 228
Query: 242 LQVVSLAQNNLSGVVPASM--FCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVL 299
L + + + + A+ C++ S+ + L + F++++ T C + +Q L
Sbjct: 229 LWLGTFEDTDDQYLTSATFEGLCDM-----SVESINLQKHRFSDLSS-STFRCFTRVQEL 282
Query: 300 DLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVP 359
DL + G P + ++L +L ++ NS L +L + N +
Sbjct: 283 DLTAAHLNG-LPSGIEGMNSLKKLVLNANSFDQLCQINAASFPSLRDLYIKGNMRKLDLG 341
Query: 360 VE-IKQCSSLSLLDLEGNRFSGE--IPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGL 416
+++ +L LDL + L ++R L+ L L+ N G +F+ P L
Sbjct: 342 TRCLEKLENLQKLDLSHSDIEASDCCNLQLKNLRHLQYLNLSYNEPLGLEDQAFKECPQL 401
Query: 417 ENLNLRHNSLSGSLPEEVL-GMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFS 475
E L++ L P ++ L L+LS + L L NL GN+F
Sbjct: 402 ELLDVAFTHLHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHLLAGLQDLRHLNLQGNSFQ 461
Query: 476 GRIPAXXXXXXXXXXXXXXXQNFSGELPIE---LAGLPNLQVIALQENKLSGNVPEGFSS 532
+ + L I+ GL N+ + L N L+G+ + S
Sbjct: 462 DGSISKTNLLQMVGSLEILILSSCNLLSIDQQAFHGLRNVNHLDLSHNSLTGDSMDALSH 521
Query: 533 LMSLRYLNLSFN 544
L L YLN++ N
Sbjct: 522 LKGL-YLNMASN 532
Score = 36.2 bits (82), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 6/142 (4%)
Query: 67 RVTELRLPRLQLSGRISDHLSNLRMLRKLSLRSNSFNGTIPATLAQCTLLRAVFLQYNSL 126
RV EL L L+G S + + L+KL L +NSF+ A LR ++++ N
Sbjct: 278 RVQELDLTAAHLNGLPSG-IEGMNSLKKLVLNANSFDQLCQINAASFPSLRDLYIKGNMR 336
Query: 127 SGNLPAN-IGNLSNLEILNVAANRLSGEIANDLP----RNLKYFDLSSNGFSGPIPTSIS 181
+L + L NL+ L+++ + + +L R+L+Y +LS N G +
Sbjct: 337 KLDLGTRCLEKLENLQKLDLSHSDIEASDCCNLQLKNLRHLQYLNLSYNEPLGLEDQAFK 396
Query: 182 NLSQLQLINFSFNKFSREVPAT 203
QL+L++ +F + P +
Sbjct: 397 ECPQLELLDVAFTHLHVKAPHS 418
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 80/182 (43%), Gaps = 7/182 (3%)
Query: 296 LQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIP-AQIGGLWRLEELKMANNSF 354
LQ L+L N+ G L LDV+ + K P + L L L +++
Sbjct: 377 LQYLNLSYNEPLGLEDQAFKECPQLELLDVAFTHLHVKAPHSPFQNLHLLRVLNLSHCLL 436
Query: 355 GGAVPVEIKQCSSLSLLDLEGNRFS-GEIPE--FLGDIRGLKSLTLAA-NLFSGSIPASF 410
+ + L L+L+GN F G I + L + L+ L L++ NL S A F
Sbjct: 437 DTSNQHLLAGLQDLRHLNLQGNSFQDGSISKTNLLQMVGSLEILILSSCNLLSIDQQA-F 495
Query: 411 RNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLS 470
L + +L+L HNSL+G + + + L L+++ N P + LSQ + NLS
Sbjct: 496 HGLRNVNHLDLSHNSLTGDSMDALSHLKGL-YLNMASNNIRIIPPHLLPALSQQSIINLS 554
Query: 471 GN 472
N
Sbjct: 555 HN 556
Score = 30.4 bits (67), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 8/115 (6%)
Query: 86 LSNLRMLRKLSLRSNSF-NGTIPAT--LAQCTLLRAVFLQ-YNSLSGNLPANIGNLSNLE 141
L+ L+ LR L+L+ NSF +G+I T L L + L N LS + A G L N+
Sbjct: 444 LAGLQDLRHLNLQGNSFQDGSISKTNLLQMVGSLEILILSSCNLLSIDQQAFHG-LRNVN 502
Query: 142 ILNVAANRLSGEIANDLPRNLK--YFDLSSNGFSGPIPTSISNLSQLQLINFSFN 194
L+++ N L+G+ + D +LK Y +++SN P + LSQ +IN S N
Sbjct: 503 HLDLSHNSLTGD-SMDALSHLKGLYLNMASNNIRIIPPHLLPALSQQSIINLSHN 556
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ +LH + H DIKP+N+L D +SDFGL + GTL YV+
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVA 175
Query: 976 PEAALTGETTKES-DVYSFGIVLLELLTGKRP 1006
PE E E DV+S GIVL +L G+ P
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ +LH + H DIKP+N+L D +SDFGL + GTL YV+
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVA 175
Query: 976 PEAALTGETTKES-DVYSFGIVLLELLTGKRP 1006
PE E E DV+S GIVL +L G+ P
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ +LH + H DIKP+N+L D +SDFGL + GTL YV+
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVA 174
Query: 976 PEAALTGETTKES-DVYSFGIVLLELLTGKRP 1006
PE E E DV+S GIVL +L G+ P
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ +LH + H DIKP+N+L D +SDFGL + GTL YV+
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVA 174
Query: 976 PEAALTGETTKES-DVYSFGIVLLELLTGKRP 1006
PE E E DV+S GIVL +L G+ P
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ +LH + H DIKP+N+L D +SDFGL + GTL YV+
Sbjct: 115 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVA 173
Query: 976 PEAALTGETTKES-DVYSFGIVLLELLTGKRP 1006
PE E E DV+S GIVL +L G+ P
Sbjct: 174 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ +LH + H DIKP+N+L D +SDFGL + GTL YV+
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVA 174
Query: 976 PEAALTGETTKES-DVYSFGIVLLELLTGKRP 1006
PE E E DV+S GIVL +L G+ P
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1
Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human Chk1
Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ +LH + H DIKP+N+L D +SDFGL + GTL YV+
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVA 174
Query: 976 PEAALTGETTKES-DVYSFGIVLLELLTGKRP 1006
PE E E DV+S GIVL +L G+ P
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint Kinase
1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint Kinase
1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ +LH + H DIKP+N+L D +SDFGL + GTL YV+
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVA 175
Query: 976 PEAALTGETTKES-DVYSFGIVLLELLTGKRP 1006
PE E E DV+S GIVL +L G+ P
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ +LH + H DIKP+N+L D +SDFGL + GTL YV+
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVA 174
Query: 976 PEAALTGETTKES-DVYSFGIVLLELLTGKRP 1006
PE E E DV+S GIVL +L G+ P
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated
Protein Kinase Alpha-2 Subunit Mutant (T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 16/178 (8%)
Query: 846 RKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPM 905
++E + L RH ++ L + D +V +Y+ G L + + G V
Sbjct: 59 KREIQNLKLFRHPHIIKLYQVISTPTDF-FMVMEYVSGGELFDYIC----KHGRVEEMEA 113
Query: 906 RHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXX 965
R L + + + H +VH D+KP+NVL DA A ++DFGL +
Sbjct: 114 RRLFQ-QILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNM----MSDGEFLR 168
Query: 966 XXVGTLGYVSPEAALTGE--TTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKK 1021
G+ Y +PE ++G E D++S G++L LL G P DE + KK
Sbjct: 169 DSCGSPNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLPF---DDEHVPTLFKK 222
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ +LH + H DIKP+N+L D +SDFGL + GTL YV+
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVA 174
Query: 976 PEAALTGETTKES-DVYSFGIVLLELLTGKRP 1006
PE E E DV+S GIVL +L G+ P
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ +LH + H DIKP+N+L D +SDFGL + GTL YV+
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVA 174
Query: 976 PEAALTGETTKES-DVYSFGIVLLELLTGKRP 1006
PE E E DV+S GIVL +L G+ P
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ +LH + H DIKP+N+L D +SDFGL + GTL YV+
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVA 175
Query: 976 PEAALTGETTKES-DVYSFGIVLLELLTGKRP 1006
PE E E DV+S GIVL +L G+ P
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ +LH + H DIKP+N+L D +SDFGL + GTL YV+
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVA 175
Query: 976 PEAALTGETTKES-DVYSFGIVLLELLTGKRP 1006
PE E E DV+S GIVL +L G+ P
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ +LH + H DIKP+N+L D +SDFGL + GTL YV+
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVA 175
Query: 976 PEAALTGETTKES-DVYSFGIVLLELLTGKRP 1006
PE E E DV+S GIVL +L G+ P
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 915 RGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
RGL FLH + +VH D+KP+N+L + L+DFGL R+ V TL Y
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI----YSYQMALFPVVVTLWYR 178
Query: 975 SPEAALTGETTKESDVYSFGIVLLELLTGK 1004
+PE L D++S G + E+ K
Sbjct: 179 APEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 809 NVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFR-KEAEFLGKVRHRNLTVLRGYY 867
V+ +G+VF+A + ++I+++ L + F+ +E + + V+H N+ L+ ++
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKV----LQDKRFKNRELQIMRIVKHPNVVDLKAFF 101
Query: 868 AGAPDLRL-----LVYDYMPNGNLGTLLQEASHQDGHVLNWPMR--HLIALGVARGLAFL 920
D + LV +Y+P T+ + + H PM L + R LA++
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPE----TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI 157
Query: 921 HTSNMVHGDIKPQNVLFDADFEA-HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAA 979
H+ + H DIKPQN+L D L DFG ++ + + Y +PE
Sbjct: 158 HSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI----LIAGEPNVSXICSRYYRAPE-L 212
Query: 980 LTGET--TKESDVYSFGIVLLELLTGK 1004
+ G T T D++S G V+ EL+ G+
Sbjct: 213 IFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ +LH + H DIKP+N+L D +SDFGL + GTL YV+
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMXGTLPYVA 174
Query: 976 PEAALTGETTKES-DVYSFGIVLLELLTGKRP 1006
PE E E DV+S GIVL +L G+ P
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And
Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In
Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 62/156 (39%), Gaps = 11/156 (7%)
Query: 860 LTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAF 919
V Y PD + D M G+L L Q G MR A + GL
Sbjct: 253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS----QHGVFSEADMR-FYAAEIILGLEH 307
Query: 920 LHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAA 979
+H +V+ D+KP N+L D +SD GL VGT GY++PE
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGL-----ACDFSKKKPHASVGTHGYMAPEVL 362
Query: 980 LTGETTKES-DVYSFGIVLLELLTGKRPVMFTQDED 1014
G S D +S G +L +LL G P + +D
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ +LH + H DIKP+N+L D +SDFGL + GTL YV+
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMXGTLPYVA 174
Query: 976 PEAALTGETTKES-DVYSFGIVLLELLTGKRP 1006
PE E E DV+S GIVL +L G+ P
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ +LH + H DIKP+N+L D +SDFGL + GTL YV+
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMXGTLPYVA 174
Query: 976 PEAALTGETTKES-DVYSFGIVLLELLTGKRP 1006
PE E E DV+S GIVL +L G+ P
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ +LH + H DIKP+N+L D +SDFGL + GTL YV+
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMXGTLPYVA 174
Query: 976 PEAALTGETTKES-DVYSFGIVLLELLTGKRP 1006
PE E E DV+S GIVL +L G+ P
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ +LH + H DIKP+N+L D +SDFGL + GTL YV+
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMXGTLPYVA 175
Query: 976 PEAALTGETTKES-DVYSFGIVLLELLTGKRP 1006
PE E E DV+S GIVL +L G+ P
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 62/156 (39%), Gaps = 11/156 (7%)
Query: 860 LTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAF 919
V Y PD + D M G+L L Q G MR A + GL
Sbjct: 253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS----QHGVFSEADMR-FYAAEIILGLEH 307
Query: 920 LHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAA 979
+H +V+ D+KP N+L D +SD GL VGT GY++PE
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGL-----ACDFSKKKPHASVGTHGYMAPEVL 362
Query: 980 LTGETTKES-DVYSFGIVLLELLTGKRPVMFTQDED 1014
G S D +S G +L +LL G P + +D
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ +LH + H DIKP+N+L D +SDFGL + GTL YV+
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVA 174
Query: 976 PEAALTGETTKES-DVYSFGIVLLELLTGKRPVMFTQD--EDIVKWVKKQ 1022
PE E E DV+S GIVL +L G+ P D ++ W +K+
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 95 LIMQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 146
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFGL +L V + +++ E+ L T +SDV+
Sbjct: 147 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 205
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 206 SYGVTVWELMTFGSKP 221
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 96 LIMQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 147
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFGL +L V + +++ E+ L T +SDV+
Sbjct: 148 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 206
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 207 SYGVTVWELMTFGSKP 222
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 100 LIMQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 151
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFGL +L V + +++ E+ L T +SDV+
Sbjct: 152 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 210
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 211 SYGVTVWELMTFGSKP 226
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 97 LIMQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 148
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFGL +L V + +++ E+ L T +SDV+
Sbjct: 149 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 207
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 208 SYGVTVWELMTFGSKP 223
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 94 LIMQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 145
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFGL +L V + +++ E+ L T +SDV+
Sbjct: 146 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 204
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 205 SYGVTVWELMTFGSKP 220
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 93 LIMQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 144
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFGL +L V + +++ E+ L T +SDV+
Sbjct: 145 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 203
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 204 SYGVTVWELMTFGSKP 219
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain
From Human
Length = 314
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 35/217 (16%)
Query: 809 NVLSRTRYGLVFKA-CYNDGMVLSIRRLPDGSLDENLFRKEAEFLGK--VRHRNLTVLRG 865
+ +R R+G V+KA ND + + I L D + ++ E E ++H NL
Sbjct: 21 EIKARGRFGCVWKAQLMNDFVAVKIFPLQD----KQSWQSEREIFSTPGMKHENLLQFIA 76
Query: 866 YYAGAPDLRL---LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHT 922
+L + L+ + G+L L+ G+++ W +A ++RGL++LH
Sbjct: 77 AEKRGSNLEVELWLITAFHDKGSLTDYLK------GNIITWNELCHVAETMSRGLSYLHE 130
Query: 923 S-----------NMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTL 971
++ H D K +NVL +D A L+DFGL + VGT
Sbjct: 131 DVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGL-AVRFEPGKPPGDTHGQVGTR 189
Query: 972 GYVSPEAALTGETTKES------DVYSFGIVLLELLT 1002
Y++PE L G + D+Y+ G+VL EL++
Sbjct: 190 RYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ +LH + H DIKP+N+L D +SDFGL + GTL YV+
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVA 175
Query: 976 PEAALTGETTKES-DVYSFGIVLLELLTGKRPVMFTQD--EDIVKWVKKQ 1022
PE E E DV+S GIVL +L G+ P D ++ W +K+
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 17/193 (8%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENL--FRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+G V+KA + VL+ ++ D +E L + E + L H N+ L + +L
Sbjct: 50 FGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNL 109
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
+L+ ++ G + ++ E L ++ L +LH + ++H D+K
Sbjct: 110 WILI-EFCAGGAVDAVMLELERP----LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 164
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKE------ 987
N+LF D + L+DFG+ +GT +++PE + ET+K+
Sbjct: 165 NILFTLDGDIKLADFGVS---AKNTRXIQRRDSFIGTPYWMAPEVVMC-ETSKDRPYDYK 220
Query: 988 SDVYSFGIVLLEL 1000
+DV+S GI L+E+
Sbjct: 221 ADVWSLGITLIEM 233
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With
Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 10/167 (5%)
Query: 848 EAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRH 907
E+ L RH LT L+ Y D V +Y N G L S + V
Sbjct: 55 ESRVLQNTRHPFLTALK-YAFQTHDRLCFVMEY---ANGGELFFHLSRE--RVFTEERAR 108
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ L +LH+ ++V+ DIK +N++ D D ++DFGL +
Sbjct: 109 FYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXF 165
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDED 1014
GT Y++PE + + D + G+V+ E++ G+ P + QD +
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP-FYNQDHE 211
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 10/167 (5%)
Query: 848 EAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRH 907
E+ L RH LT L+ Y D V +Y N G L S + V
Sbjct: 55 ESRVLQNTRHPFLTALK-YAFQTHDRLCFVMEY---ANGGELFFHLSRE--RVFTEERAR 108
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ L +LH+ ++V+ DIK +N++ D D ++DFGL +
Sbjct: 109 FYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXF 165
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDED 1014
GT Y++PE + + D + G+V+ E++ G+ P + QD +
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP-FYNQDHE 211
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5-
Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)
Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor A-
443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of 4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 10/167 (5%)
Query: 848 EAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRH 907
E+ L RH LT L+ Y D V +Y N G L S + V
Sbjct: 60 ESRVLQNTRHPFLTALK-YAFQTHDRLCFVMEY---ANGGELFFHLSRE--RVFTEERAR 113
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ L +LH+ ++V+ DIK +N++ D D ++DFGL +
Sbjct: 114 FYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXF 170
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDED 1014
GT Y++PE + + D + G+V+ E++ G+ P + QD +
Sbjct: 171 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP-FYNQDHE 216
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 10/167 (5%)
Query: 848 EAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRH 907
E+ L RH LT L+ Y D V +Y N G L S + V
Sbjct: 55 ESRVLQNTRHPFLTALK-YAFQTHDRLCFVMEY---ANGGELFFHLSRE--RVFTEERAR 108
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ L +LH+ ++V+ DIK +N++ D D ++DFGL +
Sbjct: 109 FYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXF 165
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDED 1014
GT Y++PE + + D + G+V+ E++ G+ P + QD +
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP-FYNQDHE 211
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 23/166 (13%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRL-------LVYDYMPNGNLGTLLQEASHQDGH 899
+E L +RH N+ L + PD L LV +M +LG L++ +
Sbjct: 73 RELRLLKHMRHENVIGLLDVFT--PDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDR 129
Query: 900 VLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXX 959
+ + + +GL ++H + ++H D+KP N+ + D E + DFGL R
Sbjct: 130 I------QFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR------Q 177
Query: 960 XXXXXXXXVGTLGYVSPEAALTG-ETTKESDVYSFGIVLLELLTGK 1004
V T Y +PE L T+ D++S G ++ E++TGK
Sbjct: 178 ADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT Peptide
From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT Peptide
From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFR---KEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G + P+ + +GLAF
Sbjct: 69 VKLLDVIHTENKL-YLVFEFL-HQDLKKFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 123
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KPQN+L + + L+DFGL R V TL Y +PE L
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYRAPEILL 180
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 214
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 95 LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 146
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFGL +L V + +++ E+ L T +SDV+
Sbjct: 147 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 205
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 206 SYGVTVWELMTFGSKP 221
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 118 LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 169
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFGL +L V + +++ E+ L T +SDV+
Sbjct: 170 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 228
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 229 SYGVTVWELMTFGSKP 244
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain With
4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 99 LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 150
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFGL +L V + +++ E+ L T +SDV+
Sbjct: 151 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 209
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 210 SYGVTVWELMTFGSKP 225
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 103 LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 154
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFGL +L V + +++ E+ L T +SDV+
Sbjct: 155 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 213
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 214 SYGVTVWELMTFGSKP 229
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 96 LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 147
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFGL +L V + +++ E+ L T +SDV+
Sbjct: 148 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 206
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 207 SYGVTVWELMTFGSKP 222
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 100 LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 151
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFGL +L V + +++ E+ L T +SDV+
Sbjct: 152 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 210
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 211 SYGVTVWELMTFGSKP 226
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
Length = 327
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 93 LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 144
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFGL +L V + +++ E+ L T +SDV+
Sbjct: 145 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 203
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 204 SYGVTVWELMTFGSKP 219
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 127 LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 178
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFGL +L V + +++ E+ L T +SDV+
Sbjct: 179 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 237
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 238 SYGVTVWELMTFGSKP 253
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic
Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic
Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution
Length = 336
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 93/223 (41%), Gaps = 42/223 (18%)
Query: 809 NVLSRTRYGLVFKACYNDG----MVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLT-VL 863
++ R RYG V+K ++ V S + ++N++R + + H N+ +
Sbjct: 19 ELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYR-----VPLMEHDNIARFI 73
Query: 864 RGYYAGAPDLR---LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
G D R LLV +Y PNG+L L H +W +A V RGLA+L
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYLS------LHTSDWVSSCRLAHSVTRGLAYL 127
Query: 921 HTS---------NMVHGDIKPQNVLFDADFEAHLSDFGLD-RLXXXXX----XXXXXXXX 966
HT + H D+ +NVL D +SDFGL RL
Sbjct: 128 HTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAIS 187
Query: 967 XVGTLGYVSPEAALTGETT--------KESDVYSFGIVLLELL 1001
VGT+ Y++PE L G K+ D+Y+ G++ E+
Sbjct: 188 EVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 87 LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 138
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFGL +L V + +++ E+ L T +SDV+
Sbjct: 139 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 197
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 198 SYGVTVWELMTFGSKP 213
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 100 LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 151
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFGL +L V + +++ E+ L T +SDV+
Sbjct: 152 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 210
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 211 SYGVTVWELMTFGSKP 226
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 93 LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 144
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFGL +L V + +++ E+ L T +SDV+
Sbjct: 145 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 203
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 204 SYGVTVWELMTFGSKP 219
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With Amp-
Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 93 LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 144
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFGL +L V + +++ E+ L T +SDV+
Sbjct: 145 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 203
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 204 SYGVTVWELMTFGSKP 219
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 96 LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 147
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFGL +L V + +++ E+ L T +SDV+
Sbjct: 148 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 206
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 207 SYGVTVWELMTFGSKP 222
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 96 LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 147
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFGL +L V + +++ E+ L T +SDV+
Sbjct: 148 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 206
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 207 SYGVTVWELMTFGSKP 222
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFR---KEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G + P+ + +GLAF
Sbjct: 67 VKLLDVIHTENKL-YLVFEFL-HQDLKKFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 121
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KPQN+L + + L+DFGL R V TL Y +PE L
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 212
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With
An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex With
An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 915 RGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR-LXXXXXXXXXXXXXXVGTLGY 973
RGL ++H++ ++H D+KP N+L + + E + DFG+ R L V T Y
Sbjct: 170 RGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWY 229
Query: 974 VSPEAALT-GETTKESDVYSFGIVLLELLTGKR 1005
+PE L+ E T+ D++S G + E+L ++
Sbjct: 230 RAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFR---KEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G + P+ + +GLAF
Sbjct: 68 VKLLDVIHTENKL-YLVFEFL-HQDLKKFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 122
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KPQN+L + + L+DFGL R V TL Y +PE L
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 213
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 52/211 (24%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 826 DGMVLSIRRLPDGSLDENL--FRKEAEFLGKV-RHRNLTVLRGYYAGAPDLRLLVYDYMP 882
+ + ++++ L D + +++L E E + + +H+N+ L G L ++V +Y
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIV-EYAS 124
Query: 883 NGNLGTLLQ-------EASHQDGHVLNWPM--RHLIA--LGVARGLAFLHTSNMVHGDIK 931
GNL L+ E S+ V M + L++ +ARG+ +L + +H D+
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA 184
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL + ++DFGL R + + +++PEA T +SDV+
Sbjct: 185 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVW 243
Query: 992 SFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
SFG+++ E+ T G P E++ K +K+
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 17/193 (8%)
Query: 816 YGLVFKACYNDGMVLSIRRLPDGSLDENL--FRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873
+G V+KA + VL+ ++ D +E L + E + L H N+ L + +L
Sbjct: 50 FGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNL 109
Query: 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
+L+ ++ G + ++ E L ++ L +LH + ++H D+K
Sbjct: 110 WILI-EFCAGGAVDAVMLELERP----LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 164
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKE------ 987
N+LF D + L+DFG+ +GT +++PE + ET+K+
Sbjct: 165 NILFTLDGDIKLADFGVS---AKNTRXIQRRDXFIGTPYWMAPEVVMC-ETSKDRPYDYK 220
Query: 988 SDVYSFGIVLLEL 1000
+DV+S GI L+E+
Sbjct: 221 ADVWSLGITLIEM 233
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent Biochemical
And Cell- Based Activity Throughout The Series
Length = 317
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 11/156 (7%)
Query: 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQN 934
L++ + M G L + +QE Q I + + FLH+ N+ H D+KP+N
Sbjct: 83 LIIMECMEGGELFSRIQERGDQ---AFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPEN 139
Query: 935 VLF---DADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+L+ + D L+DFG + T YV+PE + K D++
Sbjct: 140 LLYTSKEKDAVLKLTDFGFAK-----ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMW 194
Query: 992 SFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
S G+++ LL G P + I +K++++ GQ
Sbjct: 195 SLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQ 230
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor
Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 11/156 (7%)
Query: 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQN 934
L++ + M G L + +QE Q I + + FLH+ N+ H D+KP+N
Sbjct: 102 LIIMECMEGGELFSRIQERGDQ---AFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPEN 158
Query: 935 VLF---DADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+L+ + D L+DFG + T YV+PE + K D++
Sbjct: 159 LLYTSKEKDAVLKLTDFGFAK-----ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMW 213
Query: 992 SFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
S G+++ LL G P + I +K++++ GQ
Sbjct: 214 SLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQ 249
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Query: 895 HQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLX 954
H+ L P + G +LH + ++H D+K N+ + D E + DFG L
Sbjct: 112 HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG---LA 168
Query: 955 XXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
GT Y++PE + E DV+S G ++ LL GK P
Sbjct: 169 TKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor Efp
With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor Efq
With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With 3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl Pyrimidine,
Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENL---FRKEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G + P+ + +GLAF
Sbjct: 65 VKLLDVIHTENKL-YLVFEFL-HQDLKKFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 119
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KPQN+L + + L+DFGL R V TL Y +PE L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 210
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With Cell
Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The Inhibitor
Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In Complex
With 4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In Complex
With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In Complex
With 4-[(6-amino-4-pyrimidinyl) Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2 (Cdk2)
In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-2-
Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2- Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A Pyrazolo[1,
5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A Pyrazolo[1,
5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar Study,
Crystal Structure In Complex With Cdk2, Selectivity, And
Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl Pyrimidine,
Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea (At9283),
A Multi-Targeted Kinase Inhibitor With Potent Aurora
Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At Its
Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At Its
Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole Type
Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole Type
Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole Type
Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of 2-Anilino-4-(Thiazol-5-Yl)
Pyrimidine Transcriptional Cdk Inhibitors As Anticancer
Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of 2-Anilino-4-(Thiazol-5-Yl)
Pyrimidine Transcriptional Cdk Inhibitors As Anticancer
Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENL---FRKEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G + P+ + +GLAF
Sbjct: 64 VKLLDVIHTENKL-YLVFEFL-HQDLKKFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 118
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KPQN+L + + L+DFGL R V TL Y +PE L
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 209
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The
Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The
Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENL---FRKEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G + P+ + +GLAF
Sbjct: 65 VKLLDVIHTENKL-YLVFEFL-HQDLKKFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 119
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KPQN+L + + L+DFGL R V TL Y +PE L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 210
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFR---KEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G + P+ + +GLAF
Sbjct: 68 VKLLDVIHTENKL-YLVFEFL-HQDLKKFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 122
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KPQN+L + + L+DFGL R V TL Y +PE L
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 213
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFR---KEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G + P+ + +GLAF
Sbjct: 67 VKLLDVIHTENKL-YLVFEFL-HQDLKKFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 121
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KPQN+L + + L+DFGL R V TL Y +PE L
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 212
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFR---KEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G + P+ + +GLAF
Sbjct: 65 VKLLDVIHTENKL-YLVFEFL-HQDLKKFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 119
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KPQN+L + + L+DFGL R V TL Y +PE L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 210
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENL---FRKEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G + P+ + +GLAF
Sbjct: 64 VKLLDVIHTENKL-YLVFEFL-HQDLKKFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 118
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KPQN+L + + L+DFGL R V TL Y +PE L
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 209
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENL---FRKEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G + P+ + +GLAF
Sbjct: 65 VKLLDVIHTENKL-YLVFEFL-HQDLKKFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 119
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KPQN+L + + L+DFGL R V TL Y +PE L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 210
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A 2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Query: 895 HQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLX 954
H+ L P + G +LH + ++H D+K N+ + D E + DFG L
Sbjct: 108 HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG---LA 164
Query: 955 XXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
GT Y++PE + E DV+S G ++ LL GK P
Sbjct: 165 TKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFR---KEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G + P+ + +GLAF
Sbjct: 66 VKLLDVIHTENKL-YLVFEFL-HQDLKKFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 120
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KPQN+L + + L+DFGL R V TL Y +PE L
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEVVTLWYRAPEILL 177
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 211
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENL---FRKEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G + P+ + +GLAF
Sbjct: 66 VKLLDVIHTENKL-YLVFEFL-HQDLKKFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 120
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KPQN+L + + L+DFGL R V TL Y +PE L
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 211
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 30/211 (14%)
Query: 810 VLSRTRYGLVFKA-CYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGY-- 866
V +R R+G V+KA N+ + + I + D +N + E L ++H N+ G
Sbjct: 31 VKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGAEK 88
Query: 867 YAGAPDLRL-LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTS-- 923
+ D+ L L+ + G+L L+ +V++W IA +ARGLA+LH
Sbjct: 89 RGTSVDVDLWLITAFHEKGSLSDFLK------ANVVSWNELCHIAETMARGLAYLHEDIP 142
Query: 924 --------NMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
+ H DIK +NVL + A ++DFGL L VGT Y++
Sbjct: 143 GLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL-ALKFEAGKSAGDTHGQVGTRRYMA 201
Query: 976 PEAALTGETTKES------DVYSFGIVLLEL 1000
PE L G + D+Y+ G+VL EL
Sbjct: 202 PE-VLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of 6-cyclohexylmethoxy-8-isopropyl-9h-
Purin-2-ylamine And Monomeric Cdk2
Length = 299
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENL---FRKEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G + P+ + +GLAF
Sbjct: 65 VKLLDVIHTENKL-YLVFEFL-HQDLKKFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 119
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KPQN+L + + L+DFGL R V TL Y +PE L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 210
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A Gamma-
Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A Gamma-
Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With A
Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With A
Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN Complex
With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN Complex
With The Inhibitor N-&-N1
Length = 299
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFR---KEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G + P+ + +GLAF
Sbjct: 65 VKLLDVIHTENKL-YLVFEFL-HQDLKKFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 119
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KPQN+L + + L+DFGL R V TL Y +PE L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 210
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFR---KEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G + P+ + +GLAF
Sbjct: 66 VKLLDVIHTENKL-YLVFEFL-HQDLKKFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 120
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KPQN+L + + L+DFGL R V TL Y +PE L
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 211
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENL---FRKEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G L P+ + +GLAF
Sbjct: 65 VKLLDVIHTENKL-YLVFEFL-HQDLKKFM-DASALTGIPL--PLIKSYLFQLLQGLAFC 119
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KPQN+L + + L+DFGL R V TL Y +PE L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 210
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Query: 895 HQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLX 954
H+ L P + G +LH + ++H D+K N+ + D E + DFG L
Sbjct: 108 HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG---LA 164
Query: 955 XXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
GT Y++PE + E DV+S G ++ LL GK P
Sbjct: 165 TKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 58/220 (26%), Positives = 93/220 (42%), Gaps = 18/220 (8%)
Query: 808 ENVLSRTRYGLVFKACYNDGMVL--SIRRLPDGSL-DENLFRKEAEFLGKVRHRNLTVLR 864
EN + R +G V K G + + +++P + D + F++E E + + H N+ L
Sbjct: 14 ENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLY 72
Query: 865 GYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSN 924
+ D+ L+ M G L + H+ V I V +A+ H N
Sbjct: 73 ETFEDNTDIYLV----MELCTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHKLN 126
Query: 925 MVHGDIKPQNVLF---DADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALT 981
+ H D+KP+N LF D L DFGL VGT YVSP+ L
Sbjct: 127 VAHRDLKPENFLFLTDSPDSPLKLIDFGL----AARFKPGKMMRTKVGTPYYVSPQ-VLE 181
Query: 982 GETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKK 1021
G E D +S G+++ LL G P D +++ +++
Sbjct: 182 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE 221
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS
Length = 296
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFR---KEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G + P+ + +GLAF
Sbjct: 64 VKLLDVIHTENKL-YLVFEFL-HQDLKKFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 118
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KPQN+L + + L+DFGL R V TL Y +PE L
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 209
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Query: 895 HQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLX 954
H+ L P + G +LH + ++H D+K N+ + D E + DFG L
Sbjct: 130 HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG---LA 186
Query: 955 XXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
GT Y++PE + E DV+S G ++ LL GK P
Sbjct: 187 TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase
1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase
1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Query: 895 HQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLX 954
H+ L P + G +LH + ++H D+K N+ + D E + DFG L
Sbjct: 132 HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG---LA 188
Query: 955 XXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
GT Y++PE + E DV+S G ++ LL GK P
Sbjct: 189 TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap) In
Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site Phosphorylation:
Cdk2 Y15p T160p In Complex With Cyclin A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site Phosphorylation:
Cdk2 Y15p T160p In Complex With Cyclin A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium Ion
Length = 298
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFR---KEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G + P+ + +GLAF
Sbjct: 64 VKLLDVIHTENKL-YLVFEFL-HQDLKKFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 118
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KPQN+L + + L+DFGL R V TL Y +PE L
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 209
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFR---KEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G + P+ + +GLAF
Sbjct: 69 VKLLDVIHTENKL-YLVFEFL-HQDLKKFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 123
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KPQN+L + + L+DFGL R V TL Y +PE L
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEVVTLWYRAPEILL 180
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 214
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From The
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From The
Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 16/218 (7%)
Query: 803 RQFDEENVLSRTRYGLVFKACYNDGM-VLSIRRLPDGSLDENL---FRKEAEFLGKVRHR 858
+++++ + YG VFKA + +++++R+ DE + +E L +++H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 859 NLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQ-DGHVLNWPMRHLIALGVARGL 917
N+ L L LV+++ + +L + D ++ + L+ +GL
Sbjct: 62 NIVRLHDVLHSDKKL-TLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLL-----KGL 114
Query: 918 AFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPE 977
F H+ N++H D+KPQN+L + + E L++FGL R V TL Y P+
Sbjct: 115 GFCHSRNVLHRDLKPQNLLINRNGELKLANFGLAR---AFGIPVRCYSAEVVTLWYRPPD 171
Query: 978 AALTGETTKES-DVYSFGIVLLELLTGKRPVMFTQDED 1014
+ S D++S G + EL RP+ D D
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD 209
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type
Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild Type
Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 16/192 (8%)
Query: 825 NDGMVLSIRRLPDGSLDENL--FRKEAEFLGKV-RHRNLTVLRGYYAGAPDLRLLVYDYM 881
+ + ++++ L D + +++L E E + + +H+N+ L G L ++V +Y
Sbjct: 111 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYA 169
Query: 882 PNGNLGTLLQ-------EASHQDGHVLNWPM--RHLIA--LGVARGLAFLHTSNMVHGDI 930
GNL L+ E S+ V M + L++ +ARG+ +L + +H D+
Sbjct: 170 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 229
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDV 990
+NVL + ++DFGL R + + +++PEA T +SDV
Sbjct: 230 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDV 288
Query: 991 YSFGIVLLELLT 1002
+SFG+++ E+ T
Sbjct: 289 WSFGVLMWEIFT 300
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 10/159 (6%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMR 906
+E L ++H N+ L + A LR Y+ + T LQ+ G +
Sbjct: 72 RELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM---GLKFSEEKI 128
Query: 907 HLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXX 966
+ + +GL ++H++ +VH D+KP N+ + D E + DFGL R
Sbjct: 129 QYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR------HADAEMTG 182
Query: 967 XVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGK 1004
V T Y +PE L+ ++ D++S G ++ E+LTGK
Sbjct: 183 YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 10/104 (9%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAH----LSDFGLDRLXXXXXXXXXXXXXXVGTL 971
LA+ H+ ++VH D+KP+N+LF D H + DFGL L GT
Sbjct: 136 ALAYFHSQHVVHKDLKPENILFQ-DTSPHSPIKIIDFGLAEL----FKSDEHSTNAAGTA 190
Query: 972 GYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDI 1015
Y++PE + T + D++S G+V+ LLTG P T E++
Sbjct: 191 LYMAPE-VFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV 233
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 915 RGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR-LXXXXXXXXXXXXXXVGTLGY 973
RGL ++H++ ++H D+KP N+L + + E + DFG+ R L V T Y
Sbjct: 169 RGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWY 228
Query: 974 VSPEAALT-GETTKESDVYSFGIVLLELLTGKR 1005
+PE L+ E T+ D++S G + E+L ++
Sbjct: 229 RAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 24/191 (12%)
Query: 846 RKEAEFL-------GKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ----EAS 894
R+ EFL G H + +L G P L +V + M +G+L + L+ EA
Sbjct: 63 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL--VVMELMAHGDLKSYLRSLRPEAE 120
Query: 895 HQDGHVLNWP---MRHLIALG--VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFG 949
+ G P ++ +I + +A G+A+L+ VH ++ +N + DF + DFG
Sbjct: 121 NNPGR----PPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFG 176
Query: 950 LDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVM 1008
+ R + + +++PE+ G T SD++SFG+VL E+ + ++P
Sbjct: 177 MTRDIYETDYYRKGGKGLL-PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ 235
Query: 1009 FTQDEDIVKWV 1019
+E ++K+V
Sbjct: 236 GLSNEQVLKFV 246
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 808 ENVLSRTRYGLVFKA-CYNDGMVL--SIRRLPD--GSLDENLFRKEAEFLGKV-RHRNLT 861
++V+ +G V KA DG+ + +I+R+ + D F E E L K+ H N+
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 862 VLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEA-----------SHQDGHVLNWPMRHLIA 910
L G L L + +Y P+GNL L+++ ++ L+ A
Sbjct: 90 NLLGACEHRGYLYLAI-EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 911 LGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGT 970
VARG+ +L +H D+ +N+L ++ A ++DFGL R +G
Sbjct: 149 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR------GQEVYVKKTMGR 202
Query: 971 LG--YVSPEAALTGETTKESDVYSFGIVLLELLT 1002
L +++ E+ T SDV+S+G++L E+++
Sbjct: 203 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine
Derivatives As Potent, Selective Tie-2 Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of Triazine
Derivatives As Potent, Selective Tie-2 Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent 2-(Pyridin-2-Yl)-
1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent 2-(Pyridin-2-Yl)-
1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 32/217 (14%)
Query: 808 ENVLSRTRYGLVFKA-CYNDGMVL--SIRRLPD--GSLDENLFRKEAEFLGKVRHR-NLT 861
++V+ +G V KA DG+ + +I+R+ + D F E E L K+ H N+
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 862 VLRGYYAGAPDLRLLVY---DYMPNGNLGTLLQEA-----------SHQDGHVLNWPMRH 907
L GA + R +Y +Y P+GNL L+++ ++ L+
Sbjct: 80 NL----LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 135
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
A VARG+ +L +H D+ +N+L ++ A ++DFGL R
Sbjct: 136 HFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR------GQEVYVKKT 189
Query: 968 VGTL--GYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+G L +++ E+ T SDV+S+G++L E+++
Sbjct: 190 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta
Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C Beta
Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 9/143 (6%)
Query: 872 DLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
D V +Y+ G+L +Q+ P A +A GL FL + +++ D+K
Sbjct: 94 DRLYFVMEYVNGGDLMYHIQQVGR-----FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLK 148
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
NV+ D++ ++DFG+ + GT Y++PE K D +
Sbjct: 149 LDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWW 205
Query: 992 SFGIVLLELLTGKRPVMFTQDED 1014
+FG++L E+L G+ P +DED
Sbjct: 206 AFGVLLYEMLAGQAPFE-GEDED 227
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin
Receptor Tyrosine Kinase
Length = 306
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 24/191 (12%)
Query: 846 RKEAEFL-------GKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ----EAS 894
R+ EFL G H + +L G P L +V + M +G+L + L+ EA
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL--VVMELMAHGDLKSYLRSLRPEAE 119
Query: 895 HQDGHVLNWP---MRHLIALG--VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFG 949
+ G P ++ +I + +A G+A+L+ VH ++ +N + DF + DFG
Sbjct: 120 NNPGR----PPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFG 175
Query: 950 LDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVM 1008
+ R + + +++PE+ G T SD++SFG+VL E+ + ++P
Sbjct: 176 MTRDIYETDYYRKGGKGLL-PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ 234
Query: 1009 FTQDEDIVKWV 1019
+E ++K+V
Sbjct: 235 GLSNEQVLKFV 245
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 54/211 (25%), Positives = 102/211 (48%), Gaps = 17/211 (8%)
Query: 826 DGMVLSIRRLPDGSLDENL--FRKEAEFLGKV-RHRNLTVLRGYYAGAPDLRLLVYDYMP 882
+ + ++++ L D + +++L E E + + +H+N+ L G L ++V +Y
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYAS 124
Query: 883 NGNLGTLLQ-------EASHQDGHVLNWPM--RHLIALG--VARGLAFLHTSNMVHGDIK 931
GNL L+ E S+ V M + L++ +ARG+ +L + +H D+
Sbjct: 125 KGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA 184
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL + ++DFGL R + + +++PEA T +SDV+
Sbjct: 185 ARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRL-PVKWMAPEALFDRVYTHQSDVW 243
Query: 992 SFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
SFG+++ E+ T G P E++ K +K+
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 10/163 (6%)
Query: 844 LFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNW 903
L E + +H N+ + Y +L +L+ +++ G L ++ + LN
Sbjct: 88 LLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLM-EFLQGGALTDIVSQVR------LNE 140
Query: 904 PMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXX 963
+ V + LA+LH ++H DIK ++L D LSDFG
Sbjct: 141 EQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFG---FCAQISKDVPK 197
Query: 964 XXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
VGT +++PE E D++S GI+++E++ G+ P
Sbjct: 198 RKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex
With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 875 LLVYDYMPNGNLGTLLQEASH-QDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
+LV + G L LQ+ H +D +++ + H +++G + +L SN VH D+ +
Sbjct: 87 MLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMG----MKYLEESNFVHRDLAAR 140
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
NVL A +SDFGL + + + +PE + + +SDV+SF
Sbjct: 141 NVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 200
Query: 994 GIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKG 1026
G+++ E + G++P + ++ ++K + G
Sbjct: 201 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG 234
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 10/159 (6%)
Query: 848 EAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRH 907
E + +H N+ + Y +L +V +++ G L ++ + +
Sbjct: 198 EVVIMRDYQHENVVEMYNSYLVGDEL-WVVMEFLEGGALTDIVTHTRMNEEQIAA----- 251
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ L V + L+ LH ++H DIK ++L D LSDFG
Sbjct: 252 -VCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXL 307
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
VGT +++PE E D++S GI+++E++ G+ P
Sbjct: 308 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 915 RGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
+GLAF H+ ++H D+KPQN+L + + L+DFGL R V TL Y
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEVVTLWYR 170
Query: 975 SPEAALTGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+PE L + + D++S G + E++T R +F D +I
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 210
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 915 RGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
+GLAF H+ ++H D+KPQN+L + + L+DFGL R V TL Y
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEVVTLWYR 169
Query: 975 SPEAALTGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+PE L + + D++S G + E++T R +F D +I
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 209
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With Atp
Length = 302
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFR---KEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G L P+ + +GLAF
Sbjct: 68 VKLLDVIHTENKL-YLVFEFL-SMDLKDFM-DASALTGIPL--PLIKSYLFQLLQGLAFC 122
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KPQN+L + + L+DFGL R V TL Y +PE L
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 213
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFR---KEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G + P+ + +GLAF
Sbjct: 68 VKLLDVIHTENKL-YLVFEHV-DQDLKKFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 122
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KPQN+L + + L+DFGL R V TL Y +PE L
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 213
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 25/227 (11%)
Query: 800 EATRQFDEENVLSRTRYGLVFKA-CYNDGMVLSIRRLPDGSLDE----NLFRKEAEFLGK 854
E F N+L + + V++A + G+ ++I+ + ++ + + E + +
Sbjct: 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQ 67
Query: 855 VRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEA----SHQDGHVLNWPMRHLIA 910
++H ++ L Y+ + + LV + NG + L+ S + RH +
Sbjct: 68 LKHPSILELYNYFEDS-NYVYLVLEMCHNGEMNRYLKNRVKPFSENEA-------RHFMH 119
Query: 911 LGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGT 970
+ G+ +LH+ ++H D+ N+L + ++DFGL GT
Sbjct: 120 -QIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGL---ATQLKMPHEKHYTLCGT 175
Query: 971 LGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVK 1017
Y+SPE A ESDV+S G + LL G+ P D D VK
Sbjct: 176 PNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPF----DTDTVK 218
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 53.5 bits (127), Expect = 7e-07, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A G+ +L +VH D+
Sbjct: 90 LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQ------IAEGMNYLEDRRLVHRDLA 141
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFGL +L V + +++ E+ L T +SDV+
Sbjct: 142 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 200
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 201 SYGVTVWELMTFGSKP 216
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex
With A Consensus Peptide
Length = 301
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 10/159 (6%)
Query: 848 EAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRH 907
E + +H N+ + Y +L +V +++ G L ++ + +
Sbjct: 76 EVVIMRDYQHENVVEMYNSYLVGDEL-WVVMEFLEGGALTDIVTHTRMNEEQIAA----- 129
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ L V + L+ LH ++H DIK ++L D LSDFG
Sbjct: 130 -VCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXL 185
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
VGT +++PE E D++S GI+++E++ G+ P
Sbjct: 186 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 53.5 bits (127), Expect = 7e-07, Method: Composition-based stats.
Identities = 60/290 (20%), Positives = 126/290 (43%), Gaps = 40/290 (13%)
Query: 804 QFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDE-NLFRKEAEFLGKVRHRNLTV 862
Q + ++ + R+G V+ ++ + + + + + D+ F++E + RH N+ +
Sbjct: 34 QLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVL 93
Query: 863 LRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHT 922
G P L ++ L +++++A VL+ IA + +G+ +LH
Sbjct: 94 FMGACMSPPHLAIIT-SLCKGRTLYSVVRDAKI----VLDVNKTRQIAQEIVKGMGYLHA 148
Query: 923 SNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXV--GTLGYVSPEA-- 978
++H D+K +NV +D + + ++DFGL + + G L +++PE
Sbjct: 149 KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIR 207
Query: 979 ALTGET-------TKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITXX 1031
L+ +T +K SDV++ G + EL + P TQ + + W K ++
Sbjct: 208 QLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK-TQPAEAIIWQMGTGMKPNLS-- 264
Query: 1032 XXXXXXXXXXXXXXWEEFLLGVKVA---LLCTAPDPIDRPTMSDIVFMLE 1078
+ +G +++ L C A + +RPT + ++ MLE
Sbjct: 265 ----------------QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLE 298
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 53.5 bits (127), Expect = 7e-07, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 9/143 (6%)
Query: 872 DLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
D V +Y+ G+L +Q+ P A ++ GL FLH +++ D+K
Sbjct: 93 DRLYFVMEYVNGGDLMYHIQQVGK-----FKEPQAVFYAAEISIGLFFLHKRGIIYRDLK 147
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
NV+ D++ ++DFG+ + GT Y++PE K D +
Sbjct: 148 LDNVMLDSEGHIKIADFGMCK---EHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWW 204
Query: 992 SFGIVLLELLTGKRPVMFTQDED 1014
++G++L E+L G+ P +DED
Sbjct: 205 AYGVLLYEMLAGQPP-FDGEDED 226
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 915 RGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
+GLAF H+ ++H D+KPQN+L + + L+DFGL R V TL Y
Sbjct: 116 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYR 172
Query: 975 SPEAALTGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+PE L + + D++S G + E++T R +F D +I
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 212
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 875 LLVYDYMPNGNLGTLLQEASH-QDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
+LV + G L LQ+ H +D +++ + H +++G + +L SN VH D+ +
Sbjct: 81 MLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMG----MKYLEESNFVHRDLAAR 134
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
NVL A +SDFGL + + + +PE + + +SDV+SF
Sbjct: 135 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 194
Query: 994 GIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKG 1026
G+++ E + G++P + ++ ++K + G
Sbjct: 195 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG 228
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A
2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A
2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 875 LLVYDYMPNGNLGTLLQEASH-QDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
+LV + G L LQ+ H +D +++ + H +++G + +L SN VH D+ +
Sbjct: 93 MLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMG----MKYLEESNFVHRDLAAR 146
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
NVL A +SDFGL + + + +PE + + +SDV+SF
Sbjct: 147 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 206
Query: 994 GIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKG 1026
G+++ E + G++P + ++ ++K + G
Sbjct: 207 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG 240
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 875 LLVYDYMPNGNLGTLLQEASH-QDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
+LV + G L LQ+ H +D +++ + H +++G + +L SN VH D+ +
Sbjct: 103 MLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMG----MKYLEESNFVHRDLAAR 156
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
NVL A +SDFGL + + + +PE + + +SDV+SF
Sbjct: 157 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 216
Query: 994 GIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKG 1026
G+++ E + G++P + ++ ++K + G
Sbjct: 217 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG 250
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 875 LLVYDYMPNGNLGTLLQEASH-QDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
+LV + G L LQ+ H +D +++ + H +++G + +L SN VH D+ +
Sbjct: 103 MLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMG----MKYLEESNFVHRDLAAR 156
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
NVL A +SDFGL + + + +PE + + +SDV+SF
Sbjct: 157 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 216
Query: 994 GIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKG 1026
G+++ E + G++P + ++ ++K + G
Sbjct: 217 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG 250
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A
Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 875 LLVYDYMPNGNLGTLLQEASH-QDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
+LV + G L LQ+ H +D +++ + H +++G + +L SN VH D+ +
Sbjct: 83 MLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMG----MKYLEESNFVHRDLAAR 136
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
NVL A +SDFGL + + + +PE + + +SDV+SF
Sbjct: 137 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 196
Query: 994 GIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKG 1026
G+++ E + G++P + ++ ++K + G
Sbjct: 197 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG 230
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex
With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 875 LLVYDYMPNGNLGTLLQEASH-QDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
+LV + G L LQ+ H +D +++ + H +++G + +L SN VH D+ +
Sbjct: 87 MLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMG----MKYLEESNFVHRDLAAR 140
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
NVL A +SDFGL + + + +PE + + +SDV+SF
Sbjct: 141 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 200
Query: 994 GIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKG 1026
G+++ E + G++P + ++ ++K + G
Sbjct: 201 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG 234
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 875 LLVYDYMPNGNLGTLLQEASH-QDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933
+LV + G L LQ+ H +D +++ + H +++G + +L SN VH D+ +
Sbjct: 101 MLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMG----MKYLEESNFVHRDLAAR 154
Query: 934 NVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
NVL A +SDFGL + + + +PE + + +SDV+SF
Sbjct: 155 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 214
Query: 994 GIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKG 1026
G+++ E + G++P + ++ ++K + G
Sbjct: 215 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG 248
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 52/211 (24%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 826 DGMVLSIRRLPDGSLDENL--FRKEAEFLGKV-RHRNLTVLRGYYAGAPDLRLLVYDYMP 882
+ + ++++ L D + +++L E E + + +H+N+ L G L ++V +Y
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYAS 124
Query: 883 NGNLGTLLQ-------EASHQDGHVLNWPM--RHLIA--LGVARGLAFLHTSNMVHGDIK 931
GNL L+ E S+ V M + L++ +ARG+ +L + +H D+
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA 184
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL + ++DFGL R + + +++PEA T +SDV+
Sbjct: 185 ARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVW 243
Query: 992 SFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
SFG+++ E+ T G P E++ K +K+
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 10/159 (6%)
Query: 848 EAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRH 907
E + +H N+ + Y +L +V +++ G L ++ + +
Sbjct: 78 EVVIMRDYQHENVVEMYNSYLVGDEL-WVVMEFLEGGALTDIVTHTRMNEEQIAA----- 131
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ L V + L+ LH ++H DIK ++L D LSDFG
Sbjct: 132 -VCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXL 187
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
VGT +++PE E D++S GI+++E++ G+ P
Sbjct: 188 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 843 NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLN 902
L E + +H N+ + Y +L +V +++ G L ++ + +
Sbjct: 62 ELLFNEVVIMRDYQHENVVEMYNSYLVGDEL-WVVMEFLEGGALTDIVTHTRMNEEQIAA 120
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ L V + L+ LH ++H DIK ++L D LSDFG
Sbjct: 121 ------VCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVP 171
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
VGT +++PE E D++S GI+++E++ G+ P
Sbjct: 172 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 54/211 (25%), Positives = 102/211 (48%), Gaps = 17/211 (8%)
Query: 826 DGMVLSIRRLPDGSLDENL--FRKEAEFLGKV-RHRNLTVLRGYYAGAPDLRLLVYDYMP 882
+ + ++++ L D + +++L E E + + +H+N+ L G L ++V +Y
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYAS 124
Query: 883 NGNLGTLLQ-------EASHQDGHVLNWPM--RHLIA--LGVARGLAFLHTSNMVHGDIK 931
GNL L+ E S+ V M + L++ +ARG+ +L + +H D+
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA 184
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL + ++DFGL R + + +++PEA T +SDV+
Sbjct: 185 ARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRL-PVKWMAPEALFDRVYTHQSDVW 243
Query: 992 SFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
SFG+++ E+ T G P E++ K +K+
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 52/211 (24%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 826 DGMVLSIRRLPDGSLDENL--FRKEAEFLGKV-RHRNLTVLRGYYAGAPDLRLLVYDYMP 882
+ + ++++ L D + +++L E E + + +H+N+ L G L ++V +Y
Sbjct: 53 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYAS 111
Query: 883 NGNLGTLLQ-------EASHQDGHVLNWPM--RHLIA--LGVARGLAFLHTSNMVHGDIK 931
GNL L+ E S+ V M + L++ +ARG+ +L + +H D+
Sbjct: 112 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLT 171
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL + ++DFGL R + + +++PEA T +SDV+
Sbjct: 172 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVW 230
Query: 992 SFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
SFG+++ E+ T G P E++ K +K+
Sbjct: 231 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 261
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 927 HGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTK 986
H D+KP+N+L AD A+L DFG+ VGTL Y +PE T
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGI--ASATTDEKLTQLGNTVGTLYYXAPERFSESHATY 214
Query: 987 ESDVYSFGIVLLELLTGKRP 1006
+D+Y+ VL E LTG P
Sbjct: 215 RADIYALTCVLYECLTGSPP 234
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 52/211 (24%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 826 DGMVLSIRRLPDGSLDENL--FRKEAEFLGKV-RHRNLTVLRGYYAGAPDLRLLVYDYMP 882
+ + ++++ L D + +++L E E + + +H+N+ L G L ++V +Y
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYAS 124
Query: 883 NGNLGTLLQ-------EASHQDGHVLNWPM--RHLIA--LGVARGLAFLHTSNMVHGDIK 931
GNL L+ E S+ V M + L++ +ARG+ +L + +H D+
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA 184
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL + ++DFGL R + + +++PEA T +SDV+
Sbjct: 185 ARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRL-PVKWMAPEALFDRVYTHQSDVW 243
Query: 992 SFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
SFG+++ E+ T G P E++ K +K+
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 52/211 (24%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 826 DGMVLSIRRLPDGSLDENL--FRKEAEFLGKV-RHRNLTVLRGYYAGAPDLRLLVYDYMP 882
+ + ++++ L D + +++L E E + + +H+N+ L G L ++V +Y
Sbjct: 58 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYAS 116
Query: 883 NGNLGTLLQ-------EASHQDGHVLNWPM--RHLIA--LGVARGLAFLHTSNMVHGDIK 931
GNL L+ E S+ V M + L++ +ARG+ +L + +H D+
Sbjct: 117 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA 176
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL + ++DFGL R + + +++PEA T +SDV+
Sbjct: 177 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVW 235
Query: 992 SFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
SFG+++ E+ T G P E++ K +K+
Sbjct: 236 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 266
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In
Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In
Complex With Arq 069
Length = 313
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 52/211 (24%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 826 DGMVLSIRRLPDGSLDENL--FRKEAEFLGKV-RHRNLTVLRGYYAGAPDLRLLVYDYMP 882
+ + ++++ L D + +++L E E + + +H+N+ L G L ++V +Y
Sbjct: 55 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYAS 113
Query: 883 NGNLGTLLQ-------EASHQDGHVLNWPM--RHLIA--LGVARGLAFLHTSNMVHGDIK 931
GNL L+ E S+ V M + L++ +ARG+ +L + +H D+
Sbjct: 114 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA 173
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL + ++DFGL R + + +++PEA T +SDV+
Sbjct: 174 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVW 232
Query: 992 SFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
SFG+++ E+ T G P E++ K +K+
Sbjct: 233 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 263
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 843 NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLN 902
L E + +H N+ + Y +L +V +++ G L ++ + +
Sbjct: 66 ELLFNEVVIMRDYQHENVVEMYNSYLVGDEL-WVVMEFLEGGALTDIVTHTRMNEEQIAA 124
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
+ L V + L+ LH ++H DIK ++L D LSDFG
Sbjct: 125 ------VCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVP 175
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
VGT +++PE E D++S GI+++E++ G+ P
Sbjct: 176 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.1 bits (126), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 915 RGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
RGL FLH + +VH D+KP+N+L + L+DFGL R+ V TL Y
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI----YSYQMALDPVVVTLWYR 178
Query: 975 SPEAALTGETTKESDVYSFGIVLLELLTGK 1004
+PE L D++S G + E+ K
Sbjct: 179 APEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y-
27632
Length = 350
Score = 53.1 bits (126), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +YMP G++ + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYMPGGDMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 173 LIDQQGYIKVADFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 53.1 bits (126), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +YMP G++ + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYMPGGDMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 173 LIDQQGYIKVADFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 53.1 bits (126), Expect = 9e-07, Method: Composition-based stats.
Identities = 52/211 (24%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 826 DGMVLSIRRLPDGSLDENL--FRKEAEFLGKV-RHRNLTVLRGYYAGAPDLRLLVYDYMP 882
+ + ++++ L D + +++L E E + + +H+N+ L G L ++V +Y
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIV-EYAS 124
Query: 883 NGNLGTLLQ-------EASHQDGHVLNWPM--RHLIA--LGVARGLAFLHTSNMVHGDIK 931
GNL L+ E S+ V M + L++ +ARG+ +L + +H D+
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA 184
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL + ++DFGL R + + +++PEA T +SDV+
Sbjct: 185 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVW 243
Query: 992 SFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
SFG+++ E+ T G P E++ K +K+
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENL---FRKEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G + P+ + +GL+F
Sbjct: 65 VKLLDVIHTENKL-YLVFEFL-HQDLKKFM-DASALTG--IPLPLIKSYLFQLLQGLSFC 119
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KPQN+L + + L+DFGL R V TL Y +PE L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 210
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFR---KEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G + P+ + +GLAF
Sbjct: 67 VKLLDVIHTENKL-YLVFEFL-HQDLKKFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 121
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KP+N+L + + L+DFGL R V TL Y +PE L
Sbjct: 122 HSHRVLHRDLKPENLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 212
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 90/209 (43%), Gaps = 15/209 (7%)
Query: 815 RYGLVFKACY----NDGMVLSIRRLPDGSLD--ENLFRKEAEFLGKVRHRNLTVLRGYYA 868
++G V + Y N M ++I+ + + D F +EA + + H ++ L G
Sbjct: 22 QFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT 81
Query: 869 GAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHG 928
P ++ + G L + LQ + L+ L A ++ LA+L + VH
Sbjct: 82 ENP--VWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLESKRFVHR 135
Query: 929 DIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKES 988
DI +NVL ++ L DFGL R + +++PE+ T S
Sbjct: 136 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSAS 193
Query: 989 DVYSFGIVLLELLT-GKRPVMFTQDEDIV 1016
DV+ FG+ + E+L G +P ++ D++
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase
6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein Kinase
6 (Mapk6)
Length = 320
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 9/131 (6%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +YM +L +L++ + H L + RGL ++H++N++H D+KP N+
Sbjct: 99 IVQEYM-ETDLANVLEQGPLLEEHA------RLFMYQLLRGLKYIHSANVLHRDLKPANL 151
Query: 936 LFDA-DFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALT-GETTKESDVYSF 993
+ D + DFGL R+ + T Y SP L+ TK D+++
Sbjct: 152 FINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAA 211
Query: 994 GIVLLELLTGK 1004
G + E+LTGK
Sbjct: 212 GCIFAEMLTGK 222
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 10/159 (6%)
Query: 848 EAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRH 907
E + +H N+ + Y +L +V +++ G L ++ + +
Sbjct: 121 EVVIMRDYQHENVVEMYNSYLVGDEL-WVVMEFLEGGALTDIVTHTRMNEEQIAA----- 174
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
+ L V + L+ LH ++H DIK ++L D LSDFG
Sbjct: 175 -VCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXL 230
Query: 968 VGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
VGT +++PE E D++S GI+++E++ G+ P
Sbjct: 231 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With Atp
Length = 299
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFR---KEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G + P+ + +GLAF
Sbjct: 66 VKLLDVIHTENKL-YLVFEFL-HQDLKKFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 120
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KP+N+L + + L+DFGL R V TL Y +PE L
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 211
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24)
Length = 304
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ +GL +LH+ +H DIK NVL E L+DFG + VGT
Sbjct: 113 ILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFG---VAGQLTDTQIKRNTFVGTPF 169
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+++PE ++D++S GI +EL G+ P
Sbjct: 170 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An Arylamide
Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
VA+G+AFL + N +H D+ +NVL A + DFGL R + +
Sbjct: 175 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL-PVK 233
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+++PE+ T +SDV+S+GI+L E+ +
Sbjct: 234 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain
Of Csf-1r
Length = 324
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
VA+G+AFL + N +H D+ +NVL A + DFGL R + +
Sbjct: 167 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL-PVK 225
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+++PE+ T +SDV+S+GI+L E+ +
Sbjct: 226 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 158/413 (38%), Gaps = 48/413 (11%)
Query: 68 VTELRLPRLQLSGRISDHLSNLRMLRKLSLRSNSFNGTIPATLAQCTLLRAVFLQYNSLS 127
+T L L R Q++ D + L L L N +L L+ +FL +S
Sbjct: 56 LTFLDLTRCQINWIHEDTFQSHHQLSTLVLTGNPLIFMAETSLNGPKSLKHLFLIQTGIS 115
Query: 128 GNLPANIGNLSNLEILNVAANRLSG-EIANDLP-RNLKYFDLSSNGFSGPIPTSISNLSQ 185
+ NL NLE L + +N +S + D P RNLK D +N + +L
Sbjct: 116 NLEFIPVHNLENLESLYLGSNHISSIKFPKDFPARNLKVLDFQNNAIHYISREDMRSLE- 174
Query: 186 LQLINFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAIGALPKLQVV 245
Q IN S N V G S I Q GG P L V+
Sbjct: 175 -QAINLSLNFNGNNVKGIELGAFDSTI----------FQSLNFGGT--------PNLSVI 215
Query: 246 -SLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQN 304
+ QN+ + + F ++ S +++ G C ++ L+LQ++
Sbjct: 216 FNGLQNSTTQSLWLGTFEDIDDEDISSAMLK--------------GLCEMSVESLNLQEH 261
Query: 305 QIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQ 364
+ + L LD++ + G +P+ + GL L++L ++ N F +
Sbjct: 262 RFSDISSTTFQCFTQLQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHFDQLCQISAAN 320
Query: 365 CSSLSLLDLEGN----RFSGEIPEFLGDIRGLKSLTLAANLFSGSIPAS--FRNLPGLEN 418
SL+ L + GN E LG+ L++L L+ N S S +NL L+
Sbjct: 321 FPSLTHLYIRGNVKKLHLGVGCLEKLGN---LQTLDLSHNDIEASDCCSLQLKNLSHLQT 377
Query: 419 LNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPAS-IGNLSQLMVFNLS 470
LNL HN G + L LDL+ + P S NL L V NL+
Sbjct: 378 LNLSHNEPLGLQSQAFKECPQLELLDLAFTRLHINAPQSPFQNLHFLQVLNLT 430
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 134/362 (37%), Gaps = 43/362 (11%)
Query: 312 LWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLL 371
LWL + D+S + G + E L + + F + + L L
Sbjct: 227 LWLGTFEDIDDEDISSAMLKGLCEMSV------ESLNLQEHRFSDISSTTFQCFTQLQEL 280
Query: 372 DLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLP 431
DL G +P + + LK L L+ N F S N P L +L +R N L
Sbjct: 281 DLTATHLKG-LPSGMKGLNLLKKLVLSVNHFDQLCQISAANFPSLTHLYIRGNVKKLHLG 339
Query: 432 EEVL-GMNNLSTLDLSENKFSGEVPASI--GNLSQLMVFNLSGNAFSGRIPAXXXXXXXX 488
L + NL TLDLS N S+ NLS L NLS N G
Sbjct: 340 VGCLEKLGNLQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLG------------ 387
Query: 489 XXXXXXXQNFSGELPIELAGLPNLQVIALQENKLSGNVPEG-FSSLMSLRYLNLSFNGFV 547
Q F P L+++ L +L N P+ F +L L+ LNL++
Sbjct: 388 ----LQSQAF--------KECPQLELLDLAFTRLHINAPQSPFQNLHFLQVLNLTYCFLD 435
Query: 548 GQIPATXXXXXXXXXXXXXGNHIS-GSIPPE--LGNCSDLEVLELRSNSLTGHIPTDISH 604
GNH G+I L LEVL L S L
Sbjct: 436 TSNQHLLAGLPVLRHLNLKGNHFQDGTITKTNLLQTVGSLEVLILSSCGLLSIDQQAFHS 495
Query: 605 LSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVN--SNHLSGGIPDSLAKLSNLAVLDLS 662
L ++ +DLS N+LT D I S L+ + +N +N ++ P L LS + ++LS
Sbjct: 496 LGKMSHVDLSHNSLTC---DSIDSLSHLKGIYLNLAANSINIISPRLLPILSQQSTINLS 552
Query: 663 AN 664
N
Sbjct: 553 HN 554
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 123/564 (21%), Positives = 222/564 (39%), Gaps = 80/564 (14%)
Query: 153 EIANDLPRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSR-EVPATFEGTLPSA 211
EI + LP ++ + S N +PT I N + +L+N +F +R ++ E T S
Sbjct: 23 EIPDTLPNTTEFLEFSFNF----LPT-IHNRTFSRLMNLTFLDLTRCQINWIHEDTFQSH 77
Query: 212 IANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGV--VPASMFCNVSGYPP 269
L L GN L + ++ L+ + L Q +S + +P N+
Sbjct: 78 ----HQLSTLVLTGNPLIFMAETSLNGPKSLKHLFLIQTGISNLEFIPVHNLENLES--- 130
Query: 270 SIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTLT-------R 322
+ LG N +++ P+ + L+VLD Q N I +++R +
Sbjct: 131 ----LYLGSNHISSIKFPKDFPARN-LKVLDFQNNAIH-----YISREDMRSLEQAINLS 180
Query: 323 LDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEI-----KQCSSLSLL-----D 372
L+ +GN++ G ++G + + +FGG + + + ++ SL D
Sbjct: 181 LNFNGNNVKG---IELGAF---DSTIFQSLNFGGTPNLSVIFNGLQNSTTQSLWLGTFED 234
Query: 373 LEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPE 432
++ S + + L ++ ++SL L + FS +F+ L+ L+L L G LP
Sbjct: 235 IDDEDISSAMLKGLCEM-SVESLNLQEHRFSDISSTTFQCFTQLQELDLTATHLKG-LPS 292
Query: 433 EVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPAXXXXXXXXXXXX 492
+ G+N L L LS N F S N L + GN +
Sbjct: 293 GMKGLNLLKKLVLSVNHFDQLCQISAANFPSLTHLYIRGNVKKLHLGVGCLEKLGNLQTL 352
Query: 493 XXXQN---FSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQ 549
N S ++L L +LQ + L N+ G + F L L+L+F
Sbjct: 353 DLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRL--- 409
Query: 550 IPATXXXXXXXXXXXXXGNHISGSIPPELGNCSDLEVLELRS---NSLTGHIPTDISHLS 606
HI+ P N L+VL L ++ H+ + L
Sbjct: 410 -------------------HINAPQSP-FQNLHFLQVLNLTYCFLDTSNQHLLAGLPVLR 449
Query: 607 HLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNL 666
HLN+ + T + + SL L+++S L + L ++ +DLS N+L
Sbjct: 450 HLNLKGNHFQDGTITKTNLLQTVGSLEVLILSSCGLLSIDQQAFHSLGKMSHVDLSHNSL 509
Query: 667 SGEIPANLSSIFGLMNFNVSSNNL 690
+ + +LS + G+ N+++N++
Sbjct: 510 TCDSIDSLSHLKGIY-LNLAANSI 532
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 67/168 (39%), Gaps = 20/168 (11%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
VA+G+AFL + N +H D+ +N+L + DFGL R + +
Sbjct: 154 VAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL-PVK 212
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPV-MFTQDEDIVKWVKKQLQKGQITX 1030
+++PE+ T ESDV+S+GI L EL + G P D K +K+ +
Sbjct: 213 WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEH 272
Query: 1031 XXXXXXXXXXXXXXXWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLE 1078
+ C DP+ RPT IV ++E
Sbjct: 273 APAEM-----------------YDIMKTCWDADPLKRPTFKQIVQLIE 303
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
VA+G+AFL + N +H D+ +NVL A + DFGL R + +
Sbjct: 173 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL-PVK 231
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+++PE+ T +SDV+S+GI+L E+ +
Sbjct: 232 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide
Inhibitor
Length = 333
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
VA+G+AFL + N +H D+ +NVL A + DFGL R + +
Sbjct: 173 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL-PVK 231
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+++PE+ T +SDV+S+GI+L E+ +
Sbjct: 232 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine
Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 88/190 (46%), Gaps = 10/190 (5%)
Query: 838 GSLDENLFRKEAEFLGKVRHRNL-----TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQE 892
S D F +EA + + H ++ LR G + +++ +M +G+L L
Sbjct: 65 ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLL- 123
Query: 893 ASHQDGHVLNWPMRHLI--ALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGL 950
AS + N P++ L+ + +A G+ +L + N +H D+ +N + D ++DFGL
Sbjct: 124 ASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGL 183
Query: 951 DRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMF 1009
R + + +++ E+ T SDV++FG+ + E++T G+ P
Sbjct: 184 SRKIYSGDYYRQGCASKL-PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAG 242
Query: 1010 TQDEDIVKWV 1019
++ +I ++
Sbjct: 243 IENAEIYNYL 252
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 35/221 (15%)
Query: 803 RQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKV--RHRNL 860
RQ + + RYG V++ ++ G ++++ S DE + +E E V RH N+
Sbjct: 8 RQVALVECVGKGRYGEVWRGLWH-GESVAVKIF--SSRDEQSWFRETEIYNTVLLRHDNI 64
Query: 861 TVLRGYYAGAPDLR------LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVA 914
G+ A R L+ Y +G+L LQ + + L +A+ A
Sbjct: 65 L---GFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALR------LAVSAA 115
Query: 915 RGLAFLHTS--------NMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXX 966
GLA LH + H D K +NVL ++ + ++D GL +
Sbjct: 116 CGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNN 175
Query: 967 -XVGTLGYVSPEA------ALTGETTKESDVYSFGIVLLEL 1000
VGT Y++PE E+ K +D+++FG+VL E+
Sbjct: 176 PRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24)
In Complex With Staurosporine
Length = 304
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ +GL +LH+ +H DIK NVL E L+DFG + VGT
Sbjct: 113 ILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFG---VAGQLTDTQIKRNXFVGTPF 169
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+++PE ++D++S GI +EL G+ P
Sbjct: 170 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Query: 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPD---GSLDENLFRKEAEFLGKVRH 857
T +F E + +G VFK DG + +I+R GS+DE +E + V
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREV-YAHAVLG 66
Query: 858 RNLTVLRGYYAGAPDLRLLVY-DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARG 916
++ V+R + A A D +L+ +Y G+L + E + ++ L+ L V RG
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLL-LQVGRG 125
Query: 917 LAFLHTSNMVHGDIKPQNVLF 937
L ++H+ ++VH DIKP N+
Sbjct: 126 LRYIHSMSLVHMDIKPSNIFI 146
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Query: 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPD---GSLDENLFRKEAEFLGKVRH 857
T +F E + +G VFK DG + +I+R GS+DE +E + V
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREV-YAHAVLG 66
Query: 858 RNLTVLRGYYAGAPDLRLLVY-DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARG 916
++ V+R + A A D +L+ +Y G+L + E + ++ L+ L V RG
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLL-LQVGRG 125
Query: 917 LAFLHTSNMVHGDIKPQNVLF 937
L ++H+ ++VH DIKP N+
Sbjct: 126 LRYIHSMSLVHMDIKPSNIFI 146
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 67/168 (39%), Gaps = 20/168 (11%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
VA+G+AFL + N +H D+ +N+L + DFGL R + +
Sbjct: 170 VAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL-PVK 228
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVM-FTQDEDIVKWVKKQLQKGQITX 1030
+++PE+ T ESDV+S+GI L EL + G P D K +K+ +
Sbjct: 229 WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEH 288
Query: 1031 XXXXXXXXXXXXXXXWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLE 1078
+ C DP+ RPT IV ++E
Sbjct: 289 APAEM-----------------YDIMKTCWDADPLKRPTFKQIVQLIE 319
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 152/402 (37%), Gaps = 51/402 (12%)
Query: 312 LWLTRASTLTRLDVSGNSISGKIPAQIGGLWRL--EELKMANNSFGGAVPVEIKQCSSLS 369
LWL + D+S PA GL + E + + + F S L
Sbjct: 230 LWLGTFEDMDDEDIS--------PAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQ 281
Query: 370 LLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGS 429
LDL S E+P L + LK L L+AN F S N P L +L+++ N+
Sbjct: 282 ELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLE 340
Query: 430 LPEEVL-GMNNLSTLDLSENKF--SGEVPASIGNLSQLMVFNLSGNA-FSGRIPAXXXXX 485
L L + NL LDLS + S + NLS L NLS N S + A
Sbjct: 341 LGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECP 400
Query: 486 XXXXXXXXXXQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNG 545
+ + L L+V+ L + L + + F L +L++LNL N
Sbjct: 401 QLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNH 460
Query: 546 F-VGQIPATXXXXXXXXXXXXXGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISH 604
F G I T L LE+L L L+ +
Sbjct: 461 FPKGNIQKTN----------------------SLQTLGRLEILVLSFCDLSSIDQHAFTS 498
Query: 605 LSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVN--SNHLSGGIPDSLAKLSNLAVLDLS 662
L +N +DLS N LT I S L+ + +N SNH+S +P L LS ++L
Sbjct: 499 LKMMNHVDLSHNRLTS---SSIEALSHLKGIYLNLASNHISIILPSLLPILSQQRTINLR 555
Query: 663 ANNLSGEIPANLSSIFGLMNFNVSSNNLQAFANNQD-LCGKP 703
N L S+I+ L + N+Q + +D LC P
Sbjct: 556 QNPLD----CTCSNIYFLEWY---KENMQKLEDTEDTLCENP 590
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ +GL +LH+ +H DIK NVL E L+DFG + VGT
Sbjct: 133 ILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFG---VAGQLTDTQIKRNTFVGTPF 189
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+++PE ++D++S GI +EL G+ P
Sbjct: 190 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Query: 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPD---GSLDENLFRKEAEFLGKVRH 857
T +F E + +G VFK DG + +I+R GS+DE +E + V
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREV-YAHAVLG 68
Query: 858 RNLTVLRGYYAGAPDLRLLVY-DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARG 916
++ V+R + A A D +L+ +Y G+L + E + ++ L+ L V RG
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLL-LQVGRG 127
Query: 917 LAFLHTSNMVHGDIKPQNVLF 937
L ++H+ ++VH DIKP N+
Sbjct: 128 LRYIHSMSLVHMDIKPSNIFI 148
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ +GL +LH+ +H DIK NVL E L+DFG + VGT
Sbjct: 128 ILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFG---VAGQLTDTQIKRNXFVGTPF 184
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+++PE ++D++S GI +EL G+ P
Sbjct: 185 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With Atp
Length = 301
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFR---KEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G L P+ + +GLAF
Sbjct: 68 VKLLDVIHTENKL-YLVFEFL-SMDLKKFM-DASALTGIPL--PLIKSYLFQLLQGLAFC 122
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KP+N+L + + L+DFGL R V TL Y +PE L
Sbjct: 123 HSHRVLHRDLKPENLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 213
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 67/168 (39%), Gaps = 20/168 (11%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
VA+G+AFL + N +H D+ +N+L + DFGL R + +
Sbjct: 172 VAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL-PVK 230
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVM-FTQDEDIVKWVKKQLQKGQITX 1030
+++PE+ T ESDV+S+GI L EL + G P D K +K+ +
Sbjct: 231 WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEH 290
Query: 1031 XXXXXXXXXXXXXXXWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLE 1078
+ C DP+ RPT IV ++E
Sbjct: 291 APAEM-----------------YDIMKTCWDADPLKRPTFKQIVQLIE 321
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Query: 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPD---GSLDENLFRKEAEFLGKVRH 857
T +F E + +G VFK DG + +I+R GS+DE +E + V
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREV-YAHAVLG 64
Query: 858 RNLTVLRGYYAGAPDLRLLVY-DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARG 916
++ V+R + A A D +L+ +Y G+L + E + ++ L+ L V RG
Sbjct: 65 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLL-LQVGRG 123
Query: 917 LAFLHTSNMVHGDIKPQNVLF 937
L ++H+ ++VH DIKP N+
Sbjct: 124 LRYIHSMSLVHMDIKPSNIFI 144
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENL---FRKEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G + P+ + +GLAF
Sbjct: 65 VKLLDVIHTENKL-YLVFEFL-HQDLKDFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 119
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KP+N+L + + L+DFGL R V TL Y +PE L
Sbjct: 120 HSHRVLHRDLKPENLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 210
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFR---KEAEFLGKVRHRNL 860
F + + YG+V+KA G V++++++ + E + +E L ++ H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L L LV++++ + +L + +AS G L P+ + +GLAF
Sbjct: 66 VKLLDVIHTENKL-YLVFEFL-SMDLKKFM-DASALTGIPL--PLIKSYLFQLLQGLAFC 120
Query: 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL 980
H+ ++H D+KP+N+L + + L+DFGL R V TL Y +PE L
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLAR---AFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 981 TGETTKES-DVYSFGIVLLELLTGKRPVMFTQDEDI 1015
+ + D++S G + E++T R +F D +I
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEI 211
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 915 RGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
+G+ +LH + ++H D+K N+ + D + + DFG L GT Y+
Sbjct: 153 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFG---LATKIEFDGERKKTLCGTPNYI 209
Query: 975 SPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+PE + E D++S G +L LL GK P
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 11/136 (8%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+P G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 139 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 193
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 194 LIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 247
Query: 996 VLLELLTGKRPVMFTQ 1011
++ E+ G P Q
Sbjct: 248 LIYEMAAGYPPFFADQ 263
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 95 LIMQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 146
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFG +L V + +++ E+ L T +SDV+
Sbjct: 147 ARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 205
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 206 SYGVTVWELMTFGSKP 221
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 95 LIMQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 146
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFG +L V + +++ E+ L T +SDV+
Sbjct: 147 ARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 205
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 206 SYGVTVWELMTFGSKP 221
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 97 LIMQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 148
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFG +L V + +++ E+ L T +SDV+
Sbjct: 149 ARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 207
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 208 SYGVTVWELMTFGSKP 223
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 15/209 (7%)
Query: 815 RYGLVFKACY----NDGMVLSIRRLPDGSLD--ENLFRKEAEFLGKVRHRNLTVLRGYYA 868
++G V + Y N M ++I+ + + D F +EA + + H ++ L G
Sbjct: 22 QFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT 81
Query: 869 GAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHG 928
P ++ + G L + LQ L+ L A ++ LA+L + VH
Sbjct: 82 ENP--VWIIMELCTLGELRSFLQVRKFS----LDLASLILYAYQLSTALAYLESKRFVHR 135
Query: 929 DIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKES 988
DI +NVL A L DFGL R + +++PE+ T S
Sbjct: 136 DIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSAS 193
Query: 989 DVYSFGIVLLELLT-GKRPVMFTQDEDIV 1016
DV+ FG+ + E+L G +P ++ D++
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 52/211 (24%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 826 DGMVLSIRRLPDGSLDENL--FRKEAEFLGKV-RHRNLTVLRGYYAGAPDLRLLVYDYMP 882
+ + ++++ L D + +++L E E + + +H+N+ L G L ++V Y
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-GYAS 124
Query: 883 NGNLGTLLQ-------EASHQDGHVLNWPM--RHLIA--LGVARGLAFLHTSNMVHGDIK 931
GNL L+ E S+ V M + L++ +ARG+ +L + +H D+
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA 184
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL + ++DFGL R + + +++PEA T +SDV+
Sbjct: 185 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVW 243
Query: 992 SFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
SFG+++ E+ T G P E++ K +K+
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
562
Length = 301
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 915 RGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
+G+ +LH + ++H D+K N+ + D + + DFG L GT Y+
Sbjct: 137 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFG---LATKIEFDGERKKDLCGTPNYI 193
Query: 975 SPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+PE + E D++S G +L LL GK P
Sbjct: 194 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 915 RGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
+G+ +LH + ++H D+K N+ + D + + DFG L GT Y+
Sbjct: 153 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFG---LATKIEFDGERKKXLCGTPNYI 209
Query: 975 SPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+PE + E D++S G +L LL GK P
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase
Domain Of Focal Adhesion Kinase With A Phosphorylated
Activation Loop
Length = 276
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 15/209 (7%)
Query: 815 RYGLVFKACY----NDGMVLSIRRLPDGSLD--ENLFRKEAEFLGKVRHRNLTVLRGYYA 868
++G V + Y N M ++I+ + + D F +EA + + H ++ L G
Sbjct: 22 QFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT 81
Query: 869 GAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHG 928
P ++ + G L + LQ L+ L A ++ LA+L + VH
Sbjct: 82 ENP--VWIIMELCTLGELRSFLQVRKFS----LDLASLILYAYQLSTALAYLESKRFVHR 135
Query: 929 DIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKES 988
DI +NVL ++ L DFGL R + +++PE+ T S
Sbjct: 136 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL--PIKWMAPESINFRRFTSAS 193
Query: 989 DVYSFGIVLLELLT-GKRPVMFTQDEDIV 1016
DV+ FG+ + E+L G +P ++ D++
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 95 LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 146
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFG +L V + +++ E+ L T +SDV+
Sbjct: 147 ARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 205
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 206 SYGVTVWELMTFGSKP 221
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ +GL +LH+ +H DIK NVL + L+DFG + VGT
Sbjct: 129 ILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFG---VAGQLTDTQIKRNTFVGTPF 185
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+++PE ++D++S GI +EL G+ P
Sbjct: 186 WMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 100 LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 151
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFG +L V + +++ E+ L T +SDV+
Sbjct: 152 ARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 210
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 211 SYGVTVWELMTFGSKP 226
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDG----HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIK 931
L+ MP G L ++E H+D ++LNW ++ +A+G+ +L +VH D+
Sbjct: 93 LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLA 144
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL ++DFG +L V + +++ E+ L T +SDV+
Sbjct: 145 ARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVW 203
Query: 992 SFGIVLLELLT-GKRP 1006
S+G+ + EL+T G +P
Sbjct: 204 SYGVTVWELMTFGSKP 219
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
094
Length = 317
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 915 RGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
+G+ +LH + ++H D+K N+ + D + + DFG L GT Y+
Sbjct: 153 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFG---LATKIEFDGERKKDLCGTPNYI 209
Query: 975 SPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
+PE + E D++S G +L LL GK P
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Query: 895 HQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLX 954
H+ L P + G +LH + ++H D+K N+ + D E + DFG L
Sbjct: 106 HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG---LA 162
Query: 955 XXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
GT Y++PE + E DV+S G ++ LL GK P
Sbjct: 163 TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 92/211 (43%), Gaps = 18/211 (8%)
Query: 805 FDEENVLSRTRYGLVFK----ACYNDGMVLSIRRLPDGSL-----DENLFRKEAEFLGKV 855
F+ VL + YG VF+ N G + +++ L + D + E L +V
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
+H + L + L L++ +Y+ G L L+ ++G + +A ++
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLIL-EYLSGGELFMQLE----REGIFMEDTACFYLA-EISM 132
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L LH +++ D+KP+N++ + L+DFGL + GT+ Y++
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK---ESIHDGTVTHTFCGTIEYMA 189
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
PE + + D +S G ++ ++LTG P
Sbjct: 190 PEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 52/211 (24%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 826 DGMVLSIRRLPDGSLDENL--FRKEAEFLGKV-RHRNLTVLRGYYAGAPDLRLLVYDYMP 882
+ + ++++ L D + +++L E E + + +H+N+ L G L ++V Y
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-AYAS 124
Query: 883 NGNLGTLLQ-------EASHQDGHVLNWPM--RHLIA--LGVARGLAFLHTSNMVHGDIK 931
GNL L+ E S+ V M + L++ +ARG+ +L + +H D+
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA 184
Query: 932 PQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+NVL + ++DFGL R + + +++PEA T +SDV+
Sbjct: 185 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVW 243
Query: 992 SFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
SFG+++ E+ T G P E++ K +K+
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 32/217 (14%)
Query: 808 ENVLSRTRYGLVFKA-CYNDGMVL--SIRRLPD--GSLDENLFRKEAEFLGKVRHR-NLT 861
++V+ +G V KA DG+ + +I+R+ + D F E E L K+ H N+
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 862 VLRGYYAGAPDLRLLVY---DYMPNGNLGTLLQEA-----------SHQDGHVLNWPMRH 907
L GA + R +Y +Y P+GNL L+++ ++ L+
Sbjct: 87 NL----LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 142
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
A VARG+ +L +H ++ +N+L ++ A ++DFGL R
Sbjct: 143 HFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR------GQEVYVKKT 196
Query: 968 VGTL--GYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+G L +++ E+ T SDV+S+G++L E+++
Sbjct: 197 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 805 FDEENVLSRTRYGLVFK----ACYNDGMVLSIRRLPDGSL-----DENLFRKEAEFLGKV 855
F+ VL + YG VF+ N G + +++ L + D + E L +V
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
+H + L + L L++ +Y+ G L L+ ++G + +A ++
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLIL-EYLSGGELFMQLE----REGIFMEDTACFYLA-EISM 132
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
L LH +++ D+KP+N++ + L+DFGL + GT+ Y++
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK---ESIHDGTVTHXFCGTIEYMA 189
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
PE + + D +S G ++ ++LTG P
Sbjct: 190 PEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 15/209 (7%)
Query: 815 RYGLVFKACY----NDGMVLSIRRLPDGSLD--ENLFRKEAEFLGKVRHRNLTVLRGYYA 868
++G V + Y N + ++I+ + + D F +EA + + H ++ L G
Sbjct: 27 QFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT 86
Query: 869 GAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHG 928
P ++ + G L + LQ + L+ L A ++ LA+L + VH
Sbjct: 87 ENP--VWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLESKRFVHR 140
Query: 929 DIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKES 988
DI +NVL ++ L DFGL R + +++PE+ T S
Sbjct: 141 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSAS 198
Query: 989 DVYSFGIVLLELLT-GKRPVMFTQDEDIV 1016
DV+ FG+ + E+L G +P ++ D++
Sbjct: 199 DVWMFGVCMWEILMHGVKPFQGVKNNDVI 227
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1)
Length = 294
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/211 (22%), Positives = 92/211 (43%), Gaps = 13/211 (6%)
Query: 799 VEATRQFDEENVLSRTRYGLVFKACYN---DGMVLSIRRLPDGSLDENLFRKEAEFLGKV 855
V+ F + + + + +G V+K N + + + I L + + ++E L +
Sbjct: 15 VDPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC 74
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
+T G Y + L ++ +Y+ G+ LL+ ++ ++ I + +
Sbjct: 75 DSPYITRYFGSYLKSTKL-WIIMEYLGGGSALDLLKPGPLEETYIAT------ILREILK 127
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
GL +LH+ +H DIK NVL + L+DFG + VGT +++
Sbjct: 128 GLDYLHSERKIHRDIKAANVLLSEQGDVKLADFG---VAGQLTDTQIKRNXFVGTPFWMA 184
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
PE ++D++S GI +EL G+ P
Sbjct: 185 PEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 15/209 (7%)
Query: 815 RYGLVFKACY----NDGMVLSIRRLPDGSLD--ENLFRKEAEFLGKVRHRNLTVLRGYYA 868
++G V + Y N + ++I+ + + D F +EA + + H ++ L G
Sbjct: 50 QFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT 109
Query: 869 GAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHG 928
P ++ + G L + LQ + L+ L A ++ LA+L + VH
Sbjct: 110 ENP--VWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLESKRFVHR 163
Query: 929 DIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKES 988
DI +NVL ++ L DFGL R + +++PE+ T S
Sbjct: 164 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSAS 221
Query: 989 DVYSFGIVLLELLT-GKRPVMFTQDEDIV 1016
DV+ FG+ + E+L G +P ++ D++
Sbjct: 222 DVWMFGVCMWEILMHGVKPFQGVKNNDVI 250
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 15/209 (7%)
Query: 815 RYGLVFKACY----NDGMVLSIRRLPDGSLD--ENLFRKEAEFLGKVRHRNLTVLRGYYA 868
++G V + Y N + ++I+ + + D F +EA + + H ++ L G
Sbjct: 22 QFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT 81
Query: 869 GAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHG 928
P ++ + G L + LQ + L+ L A ++ LA+L + VH
Sbjct: 82 ENP--VWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLESKRFVHR 135
Query: 929 DIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKES 988
DI +NVL ++ L DFGL R + +++PE+ T S
Sbjct: 136 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSAS 193
Query: 989 DVYSFGIVLLELLT-GKRPVMFTQDEDIV 1016
DV+ FG+ + E+L G +P ++ D++
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 15/209 (7%)
Query: 815 RYGLVFKACY----NDGMVLSIRRLPDGSLD--ENLFRKEAEFLGKVRHRNLTVLRGYYA 868
++G V + Y N + ++I+ + + D F +EA + + H ++ L G
Sbjct: 25 QFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT 84
Query: 869 GAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHG 928
P ++ + G L + LQ + L+ L A ++ LA+L + VH
Sbjct: 85 ENP--VWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLESKRFVHR 138
Query: 929 DIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKES 988
DI +NVL ++ L DFGL R + +++PE+ T S
Sbjct: 139 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSAS 196
Query: 989 DVYSFGIVLLELLT-GKRPVMFTQDEDIV 1016
DV+ FG+ + E+L G +P ++ D++
Sbjct: 197 DVWMFGVCMWEILMHGVKPFQGVKNNDVI 225
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed
With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain Complexed
With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 15/209 (7%)
Query: 815 RYGLVFKACY----NDGMVLSIRRLPDGSLD--ENLFRKEAEFLGKVRHRNLTVLRGYYA 868
++G V + Y N + ++I+ + + D F +EA + + H ++ L G
Sbjct: 24 QFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT 83
Query: 869 GAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHG 928
P ++ + G L + LQ + L+ L A ++ LA+L + VH
Sbjct: 84 ENP--VWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLESKRFVHR 137
Query: 929 DIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKES 988
DI +NVL ++ L DFGL R + +++PE+ T S
Sbjct: 138 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSAS 195
Query: 989 DVYSFGIVLLELLT-GKRPVMFTQDEDIV 1016
DV+ FG+ + E+L G +P ++ D++
Sbjct: 196 DVWMFGVCMWEILMHGVKPFQGVKNNDVI 224
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt Inhibitors
Length = 336
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+P G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 104 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 158
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 159 LIDQQGYIQVTDFGFAK------RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGV 212
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 213 LIYEMAAGYPP--FFADQPI 230
>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To (s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To (R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+P G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 119 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 173
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 174 LIDQQGYIQVTDFGFAK------RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 228 LIYEMAAGYPP--FFADQPI 245
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 15/209 (7%)
Query: 815 RYGLVFKACY----NDGMVLSIRRLPDGSLD--ENLFRKEAEFLGKVRHRNLTVLRGYYA 868
++G V + Y N + ++I+ + + D F +EA + + H ++ L G
Sbjct: 19 QFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT 78
Query: 869 GAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHG 928
P ++ + G L + LQ + L+ L A ++ LA+L + VH
Sbjct: 79 ENP--VWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLESKRFVHR 132
Query: 929 DIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKES 988
DI +NVL ++ L DFGL R + +++PE+ T S
Sbjct: 133 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSAS 190
Query: 989 DVYSFGIVLLELLT-GKRPVMFTQDEDIV 1016
DV+ FG+ + E+L G +P ++ D++
Sbjct: 191 DVWMFGVCMWEILMHGVKPFQGVKNNDVI 219
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADF---EAHLSDFGLDRLXXXXXXXXXXXXXXVG 969
+ G+ +LH +N+VH D+KPQN+L + + + + DFG+ R +G
Sbjct: 140 ILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR----KIGHACELREIMG 195
Query: 970 TLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVM 1008
T Y++PE T +D+++ GI+ LLT P +
Sbjct: 196 TPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFV 234
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 10/108 (9%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
+ + H +VH D+KP+N+L D + ++DFGL + G+ Y +
Sbjct: 120 AIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNI----MTDGNFLKTSCGSPNYAA 175
Query: 976 PEAALTGE--TTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKK 1021
PE + G+ E DV+S GIVL +L G+ P DE I KK
Sbjct: 176 PE-VINGKLYAGPEVDVWSCGIVLYVMLVGRLPF---DDEFIPNLFKK 219
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ LH++ ++H D+KP N++ +D + DFGL R V T Y +
Sbjct: 136 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TASTNFMMTPYVVTRYYRA 191
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKG 1026
PE L + D++S G ++ EL+ G V+F + I +W K Q G
Sbjct: 192 PEVILGMGYKENVDIWSVGCIMGELVKGS--VIFQGTDHIDQWNKVIEQLG 240
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 19/179 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLL--VYDYMP--NGNLGTLLQ-EASHQDGHVL 901
+E + V H+N+ L + L VY M + NL ++Q E H+ L
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL 131
Query: 902 NWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXX 961
+ M L+ G+ LH++ ++H D+KP N++ +D + DFGL R
Sbjct: 132 LYQM--LV------GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR----TAGTS 179
Query: 962 XXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
V T Y +PE L + D++S G+++ E++ G V+F + I +W K
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGG--VLFPGTDHIDQWNK 236
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1012
Length = 351
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+P G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 119 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 173
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 174 LIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 228 LIYEMAAGYPP--FFADQPI 245
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+P G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+P G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 111 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 165
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 166 LIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 219
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 220 LIYEMAAGYPP--FFADQPI 237
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+P G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 119 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 173
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 174 LIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 228 LIYEMAAGYPP--FFADQPI 245
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+P G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+P G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A Small
Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+P G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 119 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 173
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 174 LIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 228 LIYEMAAGYPP--FFADQPI 245
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+P G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 119 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 173
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 174 LIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 228 LIYEMAAGYPP--FFADQPI 245
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+P G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of
Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+P G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase (Pka)
In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+P G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N-
Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y P G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYAPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
+ D ++DFGL + GT Y++PE L+ K D ++ G+
Sbjct: 173 MIDQQGYIQVTDFGLAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 15/209 (7%)
Query: 815 RYGLVFKACY----NDGMVLSIRRLPDGSLD--ENLFRKEAEFLGKVRHRNLTVLRGYYA 868
++G V + Y N M ++I+ + + D F +EA + + H ++ L G
Sbjct: 402 QFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT 461
Query: 869 GAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHG 928
P ++ + G L + LQ L+ L A ++ LA+L + VH
Sbjct: 462 ENP--VWIIMELCTLGELRSFLQVRKFS----LDLASLILYAYQLSTALAYLESKRFVHR 515
Query: 929 DIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKES 988
DI +NVL A L DFGL R + +++PE+ T S
Sbjct: 516 DIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSAS 573
Query: 989 DVYSFGIVLLELLT-GKRPVMFTQDEDIV 1016
DV+ FG+ + E+L G +P ++ D++
Sbjct: 574 DVWMFGVCMWEILMHGVKPFQGVKNNDVI 602
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 69/168 (41%), Gaps = 20/168 (11%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
VA+G+AFL + N +H D+ +N+L + DFGL R + +
Sbjct: 177 VAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARL-PVK 235
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVM-FTQDEDIVKWVKKQLQKGQITX 1030
+++PE+ T ESDV+S+GI L EL + G P D K +K+ +
Sbjct: 236 WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR------ 289
Query: 1031 XXXXXXXXXXXXXXXWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLE 1078
E + + C DP+ RPT IV ++E
Sbjct: 290 -------MLSPEHAPAEMY----DIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 19/179 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLL--VYDYMP--NGNLGTLLQ-EASHQDGHVL 901
+E + V H+N+ L + L VY M + NL ++Q E H+ L
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL 131
Query: 902 NWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXX 961
+ M L+ G+ LH++ ++H D+KP N++ +D + DFGL R
Sbjct: 132 LYQM--LV------GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR----TAGTS 179
Query: 962 XXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
V T Y +PE L + D++S G+++ E++ G V+F + I +W K
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGG--VLFPGTDHIDQWNK 236
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 10/178 (5%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRL-LVYDYMPNGNLGTL-LQEASHQDGHVLNWP 904
+E L +++H N+ L+ + D ++ L++DY + + AS + + P
Sbjct: 67 REIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLP 126
Query: 905 --MRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDAD----FEAHLSDFGLDRLXXXXX 958
M + + G+ +LH + ++H D+KP N+L + ++D G RL
Sbjct: 127 RGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPL 186
Query: 959 XXXXXXXXXVGTLGYVSPEAALTG-ETTKESDVYSFGIVLLELLTGKRPVMFTQDEDI 1015
V T Y +PE L TK D+++ G + ELLT + P+ + EDI
Sbjct: 187 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE-PIFHCRQEDI 243
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 15/209 (7%)
Query: 815 RYGLVFKACY----NDGMVLSIRRLPDGSLD--ENLFRKEAEFLGKVRHRNLTVLRGYYA 868
++G V + Y N M ++I+ + + D F +EA + + H ++ L G
Sbjct: 402 QFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT 461
Query: 869 GAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHG 928
P ++ + G L + LQ L+ L A ++ LA+L + VH
Sbjct: 462 ENP--VWIIMELCTLGELRSFLQVRKFS----LDLASLILYAYQLSTALAYLESKRFVHR 515
Query: 929 DIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKES 988
DI +NVL ++ L DFGL R + +++PE+ T S
Sbjct: 516 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSAS 573
Query: 989 DVYSFGIVLLELLT-GKRPVMFTQDEDIV 1016
DV+ FG+ + E+L G +P ++ D++
Sbjct: 574 DVWMFGVCMWEILMHGVKPFQGVKNNDVI 602
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y P G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYAPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
+ D ++DFGL + GT Y++PE L+ K D ++ G+
Sbjct: 173 MIDQQGYIKVTDFGLAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 69/168 (41%), Gaps = 20/168 (11%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
VA+G+AFL + N +H D+ +N+L + DFGL R + +
Sbjct: 177 VAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL-PVK 235
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVM-FTQDEDIVKWVKKQLQKGQITX 1030
+++PE+ T ESDV+S+GI L EL + G P D K +K+ +
Sbjct: 236 WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR------ 289
Query: 1031 XXXXXXXXXXXXXXXWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLE 1078
E + + C DP+ RPT IV ++E
Sbjct: 290 -------MLSPEHAPAEMY----DIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 51/119 (42%), Gaps = 11/119 (9%)
Query: 909 IALGVARGLAFLHTSNMVHGDIKPQNVLFDAD--FEAHLSDFGLDR-LXXXXXXXXXXXX 965
I + L +LH + H DIKP+N LF + FE L DFGL +
Sbjct: 173 IMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMT 232
Query: 966 XXVGTLGYVSPEAALTGETTKES-----DVYSFGIVLLELLTGKRPVMFTQDEDIVKWV 1019
GT +V+PE TT ES D +S G++L LL G P D D + V
Sbjct: 233 TKAGTPYFVAPEVL---NTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQV 288
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQ-EASHQDGHV 900
+E + V H+N+ L + L LV + M + NL ++Q E H+
Sbjct: 72 RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY 130
Query: 901 LNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXX 960
L + M G+ LH++ ++H D+KP N++ +D + DFGL R
Sbjct: 131 LLYQM--------LXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR----TAGT 178
Query: 961 XXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
V T Y +PE L + D++S G ++ E++ K ++F + I +W K
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRDYIDQWNK 236
Query: 1021 KQLQKG 1026
Q G
Sbjct: 237 VIEQLG 242
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+P G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 173 LIDQQGYIKVADFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+P G + + L+ P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYVPGGEMFSHLRRIGR-----FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective Inhibitor
Length = 350
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+P G + + L+ P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYVPGGEMFSHLRRIGR-----FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 857 HRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQE-----ASHQDGHVLNWPMRHLI-- 909
H N+ L G +++ ++ GNL T L+ ++D + + HLI
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 910 ALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVG 969
+ VA+G+ FL + +H D+ +N+L + DFGL R +
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL- 208
Query: 970 TLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRP 1006
L +++PE T +SDV+SFG++L E+ + G P
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A-
443654
Length = 351
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+P G + + L+ P A + +LH+ ++++ D+KP+N+
Sbjct: 119 MVMEYVPGGEMFSHLRRIGR-----FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 173
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 174 LIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 228 LIYEMAAGYPP--FFADQPI 245
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+P G + + L+ P A + +LH+ ++++ D+KP+N+
Sbjct: 111 MVMEYVPGGEMFSHLRRIGR-----FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 165
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 166 LIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 219
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 220 LIYEMAAGYPP--FFADQPI 237
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 10/174 (5%)
Query: 857 HRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQE-----ASHQDGHVLNWPMRHLI-- 909
H N+ L G +++ ++ GNL T L+ ++D + + HLI
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 910 ALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVG 969
+ VA+G+ FL + +H D+ +N+L + DFGL R +
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL- 208
Query: 970 TLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQ-DEDIVKWVKK 1021
L +++PE T +SDV+SFG++L E+ + G P + DE+ + +K+
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 262
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ LH++ ++H D+KP N++ +D + DFGL R V T Y +
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPEVVTRYYRA 193
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
PE L + D++S G ++ E++ G V+F + I +W K
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKGG--VLFPGTDHIDQWNK 236
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In
With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In
With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 18/157 (11%)
Query: 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQN 934
LV + + G L +++ H ++ MR L++ ++ +H +VH D+KP+N
Sbjct: 82 FLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS-----AVSHMHDVGVVHRDLKPEN 136
Query: 935 VLF---DADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVY 991
+LF + + E + DFG RL TL Y +PE + D++
Sbjct: 137 LLFTDENDNLEIKIIDFGFARLKPPDNQPLKTP---CFTLHYAAPELLNQNGYDESCDLW 193
Query: 992 SFGIVLLELLTGK-------RPVMFTQDEDIVKWVKK 1021
S G++L +L+G+ R + T +I+K +KK
Sbjct: 194 SLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKK 230
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 26/182 (14%)
Query: 862 VLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIAL--GVARGLAF 919
V+R Y + D L + + N NL L++ + D ++ + I+L +A G+A
Sbjct: 89 VIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 148
Query: 920 LHTSNMVHGDIKPQNVL------FDADFEAH-------LSDFGL-DRLXXXXXXXXXXXX 965
LH+ ++H D+KPQN+L F AD + +SDFGL +L
Sbjct: 149 LHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 966 XXVGTLGYVSPEAALTGETTKES-----DVYSFGIVLLELLT-GKRPV--MFTQDEDIVK 1017
GT G+ +PE L E+TK D++S G V +L+ GK P ++++ +I++
Sbjct: 209 NPSGTSGWRAPE--LLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIR 266
Query: 1018 WV 1019
+
Sbjct: 267 GI 268
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ LH++ ++H D+KP N++ +D + DFGL R V T Y +
Sbjct: 140 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMVPFVVTRYYRA 195
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
PE L + D++S G ++ E++ G V+F + I +W K
Sbjct: 196 PEVILGMGYKENVDIWSVGCIMGEMIKGG--VLFPGTDHIDQWNK 238
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Query: 880 YMPNGNLGTLLQEASHQDGHVLNWPMRHLI--ALGVARGLAFLHTSNMVHGDIKPQNVLF 937
++ +L + +E + +D + + HLI + VA+G+ FL + +H D+ +N+L
Sbjct: 174 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL 233
Query: 938 DADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVL 997
+ DFGL R + L +++PE T +SDV+SFG++L
Sbjct: 234 SEKNVVKICDFGLARDIYKDPDYVRKGDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLL 292
Query: 998 LELLT 1002
E+ +
Sbjct: 293 WEIFS 297
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ LH++ ++H D+KP N++ +D + DFGL R V T Y +
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRA 194
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
PE L + D++S G ++ E++ G V+F + I +W K
Sbjct: 195 PEVILGMGYKENVDIWSVGCIMGEMIKGG--VLFPGTDHIDQWNK 237
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The
Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The
Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ LH++ ++H D+KP N++ +D + DFGL R V T Y +
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRA 193
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
PE L + D++S G ++ E++ G V+F + I +W K
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKGG--VLFPGTDHIDQWNK 236
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ LH++ ++H D+KP N++ +D + DFGL R V T Y +
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRA 193
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
PE L + D++S G ++ E++ G V+F + I +W K
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKGG--VLFPGTDHIDQWNK 236
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 19/179 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLL--VYDYMP--NGNLGTLLQ-EASHQDGHVL 901
+E + V H+N+ L + L VY M + NL ++Q E H+ L
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL 131
Query: 902 NWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXX 961
+ M G+ LH++ ++H D+KP N++ +D + DFGL R
Sbjct: 132 LYQM--------LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTS 179
Query: 962 XXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
V T Y +PE L + D++S G ++ E++ G V+F + I +W K
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG--VLFPGTDHIDQWNK 236
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 83/209 (39%), Gaps = 39/209 (18%)
Query: 817 GLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLL 876
GL F A + LS R D +EA K++H N+ L L
Sbjct: 54 GLEFAAKIINTKKLSAR-------DFQKLEREARICRKLQHPNIVRLHDSIQ-EESFHYL 105
Query: 877 VYDYMPNGNLGTLL--------QEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHG 928
V+D + G L + +ASH +L +A+ H++ +VH
Sbjct: 106 VFDLVTGGELFEDIVAREFYSEADASHCIQQILE-------------SIAYCHSNGIVHR 152
Query: 929 DIKPQNVLFDADFEA---HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETT 985
++KP+N+L + + L+DFGL GT GY+SPE +
Sbjct: 153 NLKPENLLLASKAKGAAVKLADFGL----AIEVNDSEAWHGFAGTPGYLSPEVLKKDPYS 208
Query: 986 KESDVYSFGIVLLELLTGKRPVMFTQDED 1014
K D+++ G++L LL G P DED
Sbjct: 209 KPVDIWACGVILYILLVGYPPFW---DED 234
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 10/137 (7%)
Query: 875 LLVYDYMPNGNLGTLLQEASHQ-------DGHVLNWPMRHLI--ALGVARGLAFLHTSNM 925
+++ ++ GNL T L+ ++ D + + HLI + VA+G+ FL +
Sbjct: 110 MVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKX 169
Query: 926 VHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETT 985
+H D+ +N+L + DFGL R + L +++PE T
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL-PLKWMAPETIFDRVYT 228
Query: 986 KESDVYSFGIVLLELLT 1002
+SDV+SFG++L E+ +
Sbjct: 229 IQSDVWSFGVLLWEIFS 245
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y P G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 119 MVLEYAPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 173
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 174 LIDQQGYIKVADFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 228 LIYEMAAGYPP--FFADQPI 245
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
Length = 448
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 26/182 (14%)
Query: 862 VLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIAL--GVARGLAF 919
V+R Y + D L + + N NL L++ + D ++ + I+L +A G+A
Sbjct: 89 VIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 148
Query: 920 LHTSNMVHGDIKPQNVL------FDADFEAH-------LSDFGL-DRLXXXXXXXXXXXX 965
LH+ ++H D+KPQN+L F AD + +SDFGL +L
Sbjct: 149 LHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 966 XXVGTLGYVSPEAALTGETTKES-----DVYSFGIVLLELLT-GKRPV--MFTQDEDIVK 1017
GT G+ +PE L E+TK D++S G V +L+ GK P ++++ +I++
Sbjct: 209 NPSGTSGWRAPE--LLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIR 266
Query: 1018 WV 1019
+
Sbjct: 267 GI 268
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 49.7 bits (117), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y P G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYAPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
+ D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 173 MIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 19/179 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLL--VYDYMP--NGNLGTLLQ-EASHQDGHVL 901
+E + V H+N+ L + L VY M + NL ++Q E H+ L
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL 131
Query: 902 NWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXX 961
+ M L+ G+ LH++ ++H D+KP N++ +D + DFGL R
Sbjct: 132 LYQM--LV------GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR----TAGTS 179
Query: 962 XXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
V T Y +PE L + D++S G ++ E++ G V+F + I +W K
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG--VLFPGTDHIDQWNK 236
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 11/173 (6%)
Query: 858 RNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGL 917
R + V YAG L L+V + + G L + +Q+ Q I + +
Sbjct: 74 RIVDVYENLYAGRKCL-LIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAI 129
Query: 918 AFLHTSNMVHGDIKPQNVLFDA---DFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
+LH+ N+ H D+KP+N+L+ + + L+DFG + T YV
Sbjct: 130 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYV 185
Query: 975 SPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
+PE + K D++S G+++ LL G P I +K +++ GQ
Sbjct: 186 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 238
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 11/173 (6%)
Query: 858 RNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGL 917
R + V YAG L L+V + + G L + +Q+ Q I + +
Sbjct: 73 RIVDVYENLYAGRKCL-LIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAI 128
Query: 918 AFLHTSNMVHGDIKPQNVLFDA---DFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
+LH+ N+ H D+KP+N+L+ + + L+DFG + T YV
Sbjct: 129 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYV 184
Query: 975 SPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
+PE + K D++S G+++ LL G P I +K +++ GQ
Sbjct: 185 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 237
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 11/173 (6%)
Query: 858 RNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGL 917
R + V YAG L L+V + + G L + +Q+ Q I + +
Sbjct: 89 RIVDVYENLYAGRKCL-LIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAI 144
Query: 918 AFLHTSNMVHGDIKPQNVLFDA---DFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
+LH+ N+ H D+KP+N+L+ + + L+DFG + T YV
Sbjct: 145 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYV 200
Query: 975 SPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
+PE + K D++S G+++ LL G P I +K +++ GQ
Sbjct: 201 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 253
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 11/173 (6%)
Query: 858 RNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGL 917
R + V YAG L L+V + + G L + +Q+ Q I + +
Sbjct: 80 RIVDVYENLYAGRKCL-LIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAI 135
Query: 918 AFLHTSNMVHGDIKPQNVLFDA---DFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
+LH+ N+ H D+KP+N+L+ + + L+DFG + T YV
Sbjct: 136 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYV 191
Query: 975 SPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
+PE + K D++S G+++ LL G P I +K +++ GQ
Sbjct: 192 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 244
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
Length = 324
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 11/173 (6%)
Query: 858 RNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGL 917
R + V YAG L L+V + + G L + +Q+ Q I + +
Sbjct: 79 RIVDVYENLYAGRKCL-LIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAI 134
Query: 918 AFLHTSNMVHGDIKPQNVLFDA---DFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
+LH+ N+ H D+KP+N+L+ + + L+DFG + T YV
Sbjct: 135 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYV 190
Query: 975 SPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
+PE + K D++S G+++ LL G P I +K +++ GQ
Sbjct: 191 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 243
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 11/173 (6%)
Query: 858 RNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGL 917
R + V YAG L L+V + + G L + +Q+ Q I + +
Sbjct: 75 RIVDVYENLYAGRKCL-LIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAI 130
Query: 918 AFLHTSNMVHGDIKPQNVLFDA---DFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
+LH+ N+ H D+KP+N+L+ + + L+DFG + T YV
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYV 186
Query: 975 SPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
+PE + K D++S G+++ LL G P I +K +++ GQ
Sbjct: 187 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 239
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 11/173 (6%)
Query: 858 RNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGL 917
R + V YAG L L+V + + G L + +Q+ Q I + +
Sbjct: 75 RIVDVYENLYAGRKCL-LIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAI 130
Query: 918 AFLHTSNMVHGDIKPQNVLFDA---DFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
+LH+ N+ H D+KP+N+L+ + + L+DFG + T YV
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYV 186
Query: 975 SPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
+PE + K D++S G+++ LL G P I +K +++ GQ
Sbjct: 187 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 239
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 11/173 (6%)
Query: 858 RNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGL 917
R + V YAG L L+V + + G L + +Q+ Q I + +
Sbjct: 81 RIVDVYENLYAGRKCL-LIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAI 136
Query: 918 AFLHTSNMVHGDIKPQNVLFDA---DFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
+LH+ N+ H D+KP+N+L+ + + L+DFG + T YV
Sbjct: 137 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYV 192
Query: 975 SPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
+PE + K D++S G+++ LL G P I +K +++ GQ
Sbjct: 193 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 245
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQ-EASHQDGHV 900
+E + V H+N+ L + L LV + M + NL ++Q E H+
Sbjct: 72 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY 130
Query: 901 LNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXX 960
L + M G+ LH++ ++H D+KP N++ +D + DFGL R
Sbjct: 131 LLYQM--------LXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR----TAGT 178
Query: 961 XXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
V T Y +PE L + D++S G ++ E++ K ++F + I +W K
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRDYIDQWNK 236
Query: 1021 KQLQKG 1026
Q G
Sbjct: 237 VIEQLG 242
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQ-EASHQDGHV 900
+E + V H+N+ L + L LV + M + NL ++Q E H+
Sbjct: 72 RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY 130
Query: 901 LNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXX 960
L + M G+ LH++ ++H D+KP N++ +D + DFGL R
Sbjct: 131 LLYQM--------LCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR----TAGT 178
Query: 961 XXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
V T Y +PE L + D++S G ++ E++ K ++F + I +W K
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRDYIDQWNK 236
Query: 1021 KQLQKG 1026
Q G
Sbjct: 237 VIEQLG 242
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQ-EASHQDGHV 900
+E + V H+N+ L + L LV + M + NL ++Q E H+
Sbjct: 65 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY 123
Query: 901 LNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXX 960
L + M G+ LH++ ++H D+KP N++ +D + DFGL R
Sbjct: 124 LLYQM--------LXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR----TAGT 171
Query: 961 XXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
V T Y +PE L + D++S G ++ E++ K ++F + I +W K
Sbjct: 172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRDYIDQWNK 229
Query: 1021 KQLQKG 1026
Q G
Sbjct: 230 VIEQLG 235
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ LH++ ++H D+KP N++ +D + DFGL R V T Y +
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR----TAGTSFMMTPYVVTRYYRA 193
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
PE L + D++S G ++ E++ G V+F + I +W K
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKGG--VLFPGTDHIDQWNK 236
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
V+ G+ +L N VH D+ +NVL A +SDFGL + L
Sbjct: 119 VSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK 178
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
+ +PE + + SDV+S+G+ + E L+ G++P + +++ ++++
Sbjct: 179 WYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 228
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
V+ G+ +L N VH ++ +NVL A +SDFGL + L
Sbjct: 445 VSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK 504
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKK 1021
+ +PE + + SDV+S+G+ + E L+ G++P + +++ ++++
Sbjct: 505 WYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 554
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 11/173 (6%)
Query: 858 RNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGL 917
R + V YAG L L+V + + G L + +Q+ Q I + +
Sbjct: 73 RIVDVYENLYAGRKCL-LIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAI 128
Query: 918 AFLHTSNMVHGDIKPQNVLFDA---DFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
+LH+ N+ H D+KP+N+L+ + + L+DFG + T YV
Sbjct: 129 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTEPCYTPYYV 184
Query: 975 SPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
+PE + K D++S G+++ LL G P I +K +++ GQ
Sbjct: 185 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 237
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 19/179 (10%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLL--VYDYMP--NGNLGTLLQ-EASHQDGHVL 901
+E + V H+N+ L + L VY M + NL ++Q E H+ L
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL 131
Query: 902 NWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXX 961
+ M G+ LH++ ++H D+KP N++ +D + DFGL R
Sbjct: 132 LYQM--------LCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR----TAGTS 179
Query: 962 XXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
V T Y +PE L + D++S G ++ E++ G V+F + I +W K
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG--VLFPGTDHIDQWNK 236
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr-
3451
Length = 353
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQ-EASHQDGHV 900
+E + V H+N+ L + L LV + M + NL ++Q E H+
Sbjct: 72 RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY 130
Query: 901 LNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXX 960
L + M G+ LH++ ++H D+KP N++ +D + DFGL R
Sbjct: 131 LLYQM--------LCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR----TAGT 178
Query: 961 XXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
V T Y +PE L + D++S G ++ E++ K ++F + I +W K
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRDYIDQWNK 236
Query: 1021 KQLQKG 1026
Q G
Sbjct: 237 VIEQLG 242
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein
Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein
Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 59/136 (43%), Gaps = 11/136 (8%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+ G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 139 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 193
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 194 LIDQQGYIQVTDFGFAK------RVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGV 247
Query: 996 VLLELLTGKRPVMFTQ 1011
++ E+ G P Q
Sbjct: 248 LIYEMAAGYPPFFADQ 263
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 11/173 (6%)
Query: 858 RNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGL 917
R + V YAG L L+V + + G L + +Q+ Q I + +
Sbjct: 119 RIVDVYENLYAGRKCL-LIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAI 174
Query: 918 AFLHTSNMVHGDIKPQNVLFDADFE---AHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
+LH+ N+ H D+KP+N+L+ + L+DFG + T YV
Sbjct: 175 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYV 230
Query: 975 SPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
+PE + K D++S G+++ LL G P I +K +++ GQ
Sbjct: 231 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 283
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m,
Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m,
Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m,
Q181k) With Compound 27
Length = 351
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y P G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 119 MVMEYAPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 173
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
+ D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 174 MIDQQGYIKVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 228 LIYEMAAGYPP--FFADQPI 245
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5-
Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)
Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-(5-Methyl-
1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With (1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y P G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 119 MVMEYAPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 173
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
+ D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 174 MIDQQGYIKVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 228 LIYEMAAGYPP--FFADQPI 245
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQ-EASHQDGHV 900
+E + V H+N+ L + L LV + M + NL ++Q E H+
Sbjct: 110 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY 168
Query: 901 LNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXX 960
L + M G+ LH++ ++H D+KP N++ +D + DFGL R
Sbjct: 169 LLYQM--------LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGT 216
Query: 961 XXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
V T Y +PE L + D++S G ++ E++ K ++F + I +W K
Sbjct: 217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRDYIDQWNK 274
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y P G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYAPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
+ D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 173 MIDQQGYIKVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y P G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 119 MVMEYAPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 173
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
+ D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 174 MIDQQGYIKVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 228 LIYEMAAGYPP--FFADQPI 245
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 90/219 (41%), Gaps = 31/219 (14%)
Query: 803 RQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTV 862
RQ + + RYG V++ + G ++++ S DE + +E E V R+ +
Sbjct: 37 RQITLLECVGKGRYGEVWRGSWQ-GENVAVKIF--SSRDEKSWFRETELYNTVMLRHENI 93
Query: 863 LRGYYAGAPDLR------LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARG 916
L G+ A R L+ Y G+L LQ + L I L +A G
Sbjct: 94 L-GFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR------IVLSIASG 146
Query: 917 LAFLHTS--------NMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXX-X 967
LA LH + H D+K +N+L + + ++D GL +
Sbjct: 147 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 206
Query: 968 VGTLGYVSPEA------ALTGETTKESDVYSFGIVLLEL 1000
VGT Y++PE ++ K D+++FG+VL E+
Sbjct: 207 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 11/173 (6%)
Query: 858 RNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGL 917
R + V YAG L L+V + + G L + +Q+ Q I + +
Sbjct: 125 RIVDVYENLYAGRKCL-LIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAI 180
Query: 918 AFLHTSNMVHGDIKPQNVLFDADFE---AHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
+LH+ N+ H D+KP+N+L+ + L+DFG + T YV
Sbjct: 181 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYV 236
Query: 975 SPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
+PE + K D++S G+++ LL G P I +K +++ GQ
Sbjct: 237 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 289
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ LH++ ++H D+KP N++ +D + DFGL R V T Y +
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TACTNFMMTPYVVTRYYRA 193
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKG 1026
PE L D++S G ++ EL+ G V+F + I +W K Q G
Sbjct: 194 PEVILGMGYAANVDIWSVGCIMGELVKG--CVIFQGTDHIDQWNKVIEQLG 242
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 16/167 (9%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLL-QEASHQDGHVLNWPM 905
+E L +V H N+ L Y D+ +L+ + + G L L Q+ S + ++
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDV-VLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 906 RHLIALGVARGLAFLHTSNMVHGDIKPQNV-LFDADF---EAHLSDFGLDRLXXXXXXXX 961
+ + G+ +LHT + H D+KP+N+ L D + L DFGL
Sbjct: 123 Q------ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL----AHEIEDG 172
Query: 962 XXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVM 1008
GT +V+PE E+D++S G++ LL+G P +
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 16/167 (9%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLL-QEASHQDGHVLNWPM 905
+E L +V H N+ L Y D+ +L+ + + G L L Q+ S + ++
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDV-VLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 906 RHLIALGVARGLAFLHTSNMVHGDIKPQNV-LFDADF---EAHLSDFGLDRLXXXXXXXX 961
+ + G+ +LHT + H D+KP+N+ L D + L DFGL
Sbjct: 123 Q------ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL----AHEIEDG 172
Query: 962 XXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVM 1008
GT +V+PE E+D++S G++ LL+G P +
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 16/167 (9%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLL-QEASHQDGHVLNWPM 905
+E L +V H N+ L Y D+ +L+ + + G L L Q+ S + ++
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDV-VLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 906 RHLIALGVARGLAFLHTSNMVHGDIKPQNV-LFDADF---EAHLSDFGLDRLXXXXXXXX 961
+ + G+ +LHT + H D+KP+N+ L D + L DFGL
Sbjct: 123 Q------ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL----AHEIEDG 172
Query: 962 XXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVM 1008
GT +V+PE E+D++S G++ LL+G P +
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 16/167 (9%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLL-QEASHQDGHVLNWPM 905
+E L +V H N+ L Y D+ +L+ + + G L L Q+ S + ++
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDV-VLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 906 RHLIALGVARGLAFLHTSNMVHGDIKPQNV-LFDADF---EAHLSDFGLDRLXXXXXXXX 961
+ + G+ +LHT + H D+KP+N+ L D + L DFGL
Sbjct: 123 Q------ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL----AHEIEDG 172
Query: 962 XXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVM 1008
GT +V+PE E+D++S G++ LL+G P +
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 16/167 (9%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLL-QEASHQDGHVLNWPM 905
+E L +V H N+ L Y D+ +L+ + + G L L Q+ S + ++
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDV-VLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 906 RHLIALGVARGLAFLHTSNMVHGDIKPQNV-LFDADF---EAHLSDFGLDRLXXXXXXXX 961
+ + G+ +LHT + H D+KP+N+ L D + L DFGL
Sbjct: 123 Q------ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL----AHEIEDG 172
Query: 962 XXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVM 1008
GT +V+PE E+D++S G++ LL+G P +
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 97/245 (39%), Gaps = 48/245 (19%)
Query: 206 GTLPSAI-ANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGV----VPASM 260
+LP I N L LS N L + A LQ + L+ N L+ V +P+
Sbjct: 130 SSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLF 189
Query: 261 FCNVS-------GYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLW 313
NVS P ++ + N+ V GP + L +L LQ N + W
Sbjct: 190 HANVSYNLLSTLAIPIAVEELDASHNSINVVRGP----VNVELTILKLQHNNLTDT--AW 243
Query: 314 LTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNS------FGGAVP-VEIKQCS 366
L L +D+S N + + + RLE L ++NN +G +P +++ S
Sbjct: 244 LLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLS 303
Query: 367 SLSLLDLEGNRFSGEIPEF-----------------LGDIRGLKSLTLAANLFS-GSIPA 408
LL +E N+ P+F L LK+LTL+ N + S+ A
Sbjct: 304 HNHLLHVERNQ-----PQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDCNSLRA 358
Query: 409 SFRNL 413
FRN+
Sbjct: 359 LFRNV 363
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+ G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F DE I
Sbjct: 227 LIYEMAAGYPP--FFADEPI 244
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 27/220 (12%)
Query: 807 EENVLSRTRYGLVFKACYN-----DGMVLSIRRLPDGSLDENLFRKEAEFLGKVR-HRNL 860
+E+VL + V + C N + V I + P G + +FR E E L + + HRN+
Sbjct: 17 QEDVLGEGAHARV-QTCINLITSQEYAVKIIEKQP-GHIRSRVFR-EVEMLYQCQGHRNV 73
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L ++ D LV++ M G++ + + + H N ++ VA L FL
Sbjct: 74 LELIEFFEEE-DRFYLVFEKMRGGSILSHIHKRRH-----FNELEASVVVQDVASALDFL 127
Query: 921 HTSNMVHGDIKPQNVLFDADFE---AHLSDFGLDRLXX----XXXXXXXXXXXXVGTLGY 973
H + H D+KP+N+L + + + DFGL G+ Y
Sbjct: 128 HNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEY 187
Query: 974 VSPEA--ALTGETT---KESDVYSFGIVLLELLTGKRPVM 1008
++PE A + E + K D++S G++L LL+G P +
Sbjct: 188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFV 227
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 6/158 (3%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F +EA L + H N+ L G + +V + + G+ T L+ +G L
Sbjct: 159 FLQEARILKQYSHPNIVRLIGVCTQKQPI-YIVMELVQGGDFLTFLR----TEGARLRVK 213
Query: 905 MRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXX 964
+ A G+ +L + +H D+ +N L +SDFG+ R
Sbjct: 214 TLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGG 273
Query: 965 XXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
V + + +PEA G + ESDV+SFGI+L E +
Sbjct: 274 LRQV-PVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 11/168 (6%)
Query: 848 EAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRH 907
E L RH LT L+ Y D V +Y N G L S + V +
Sbjct: 58 ENRVLQNSRHPFLTALK-YSFQTHDRLCFVMEY---ANGGELFFHLSRE--RVFSEDRAR 111
Query: 908 LIALGVARGLAFLHTS-NMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXX 966
+ L +LH+ N+V+ D+K +N++ D D ++DFGL +
Sbjct: 112 FYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKX 168
Query: 967 XVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDED 1014
GT Y++PE + + D + G+V+ E++ G+ P + QD +
Sbjct: 169 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP-FYNQDHE 215
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 11/168 (6%)
Query: 848 EAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRH 907
E L RH LT L+ Y D V +Y N G L S + V +
Sbjct: 59 ENRVLQNSRHPFLTALK-YSFQTHDRLCFVMEY---ANGGELFFHLSRE--RVFSEDRAR 112
Query: 908 LIALGVARGLAFLHTS-NMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXX 966
+ L +LH+ N+V+ D+K +N++ D D ++DFGL +
Sbjct: 113 FYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKX 169
Query: 967 XVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDED 1014
GT Y++PE + + D + G+V+ E++ G+ P + QD +
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP-FYNQDHE 216
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 13/177 (7%)
Query: 857 HRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQ--------DGHVLNWPMRHL 908
H N+ L G +++ ++ GNL T L+ ++ D + + HL
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 909 I--ALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXX 966
I + VA+G+ FL + +H D+ +N+L + DFGL R
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 967 XVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQ-DEDIVKWVKK 1021
+ L +++PE T +SDV+SFG++L E+ + G P + DE+ + +K+
Sbjct: 211 RL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide
And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide
And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 11/168 (6%)
Query: 848 EAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRH 907
E L RH LT L+ Y D V +Y N G L S + V +
Sbjct: 60 ENRVLQNSRHPFLTALK-YSFQTHDRLCFVMEY---ANGGELFFHLSRE--RVFSEDRAR 113
Query: 908 LIALGVARGLAFLHTS-NMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXX 966
+ L +LH+ N+V+ D+K +N++ D D ++DFGL +
Sbjct: 114 FYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKX 170
Query: 967 XVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDED 1014
GT Y++PE + + D + G+V+ E++ G+ P + QD +
Sbjct: 171 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP-FYNQDHE 217
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 6/158 (3%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
F +EA L + H N+ L G + +V + + G+ T L+ +G L
Sbjct: 159 FLQEARILKQYSHPNIVRLIGVCTQKQPI-YIVMELVQGGDFLTFLR----TEGARLRVK 213
Query: 905 MRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXX 964
+ A G+ +L + +H D+ +N L +SDFG+ R
Sbjct: 214 TLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGG 273
Query: 965 XXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
V + + +PEA G + ESDV+SFGI+L E +
Sbjct: 274 LRQV-PVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 14/178 (7%)
Query: 857 HRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ---------EASHQDGHVLNWPMRH 907
H N+ L G +++ ++ GNL T L+ + + +D + + H
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 908 LI--ALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXX 965
LI + VA+G+ FL + +H D+ +N+L + DFGL R
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 966 XXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQ-DEDIVKWVKK 1021
+ L +++PE T +SDV+SFG++L E+ + G P + DE+ + +K+
Sbjct: 210 ARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 14/178 (7%)
Query: 857 HRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ---------EASHQDGHVLNWPMRH 907
H N+ L G +++ ++ GNL T L+ + + +D + + H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 908 LI--ALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXX 965
LI + VA+G+ FL + +H D+ +N+L + DFGL R
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 966 XXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQ-DEDIVKWVKK 1021
+ L +++PE T +SDV+SFG++L E+ + G P + DE+ + +K+
Sbjct: 201 ARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 166/393 (42%), Gaps = 55/393 (13%)
Query: 92 LRKLSLRSNSFNGTIPATLAQCTLLRAVFLQYNSLSGNLPANIGNLSNLEILNVAANRLS 151
L L L N+ N + A L FL+YN++ ++ L N+ LN+ +
Sbjct: 250 LTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTK 309
Query: 152 GEIA-NDLPR----------NLKYFDLSSN---GFSGPIPTSISNLSQLQLINFSFNKFS 197
I+ LP+ L++ ++ N G + T + NL L L N SF
Sbjct: 310 QSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSN-SFTSLR 368
Query: 198 REVPATFEGTLPSAIANCSSLVH-LSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVV 256
TF ++ S +H L+ N + + A L L+V+ L N + +
Sbjct: 369 TLTNETF-------VSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQEL 421
Query: 257 PASMFCNVSG----YPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRG--AF 310
+ + Y + +QL N+F V LQ L L++ ++ +
Sbjct: 422 TGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPS---------LQRLMLRRVALKNVDSS 472
Query: 311 PLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSF---------GGAVPVE 361
P LT LD+S N+I+ + GL +LE L + +N+ GG +
Sbjct: 473 PSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYF- 531
Query: 362 IKQCSSLSLLDLEGNRFSGEIP-EFLGDIRGLKSLTLAANLFSGSIPAS-FRNLPGLENL 419
+K S L +L+LE N F EIP E D+ LK + L N ++PAS F N L++L
Sbjct: 532 LKGLSHLHILNLESNGF-DEIPVEVFKDLFELKIIDLGLNNL-NTLPASVFNNQVSLKSL 589
Query: 420 NLRHNSLSGSLPEEVLG--MNNLSTLDLSENKF 450
NL+ N L S+ ++V G NL+ LD+ N F
Sbjct: 590 NLQKN-LITSVEKKVFGPAFRNLTELDMRFNPF 621
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 154/397 (38%), Gaps = 24/397 (6%)
Query: 296 LQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFG 355
+ VL+L NQ+R TR S LT LDV N+IS P L L+ L + +N
Sbjct: 27 ITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS 86
Query: 356 GAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPG 415
C++L+ L L N + L +L L+ N S + + L
Sbjct: 87 QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLEN 146
Query: 416 LENLNLRHNSLSGSLPEE--VLGMNNLSTLDLSENK---FSGEVPASIGNLSQLMVFNLS 470
L+ L L +N + EE + ++L L+LS N+ FS +IG L L + N+
Sbjct: 147 LQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQ 206
Query: 471 -GNAFSGRIPAXXXXXXXXXXXXXXXQNFSGELPIELAGLP--NLQVIALQENKLSGNVP 527
G + + ++ Q S GL NL ++ L N L+
Sbjct: 207 LGPSLTEKLCLELANTSIRNLSLSNSQ-LSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGN 265
Query: 528 EGFSSLMSLRYLNLSFNG----FVGQIPATXXXXXXXXXXXXXGNHISGSIPPELGNCS- 582
+ F+ L L Y L +N F + IS + P++ + S
Sbjct: 266 DSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSF 325
Query: 583 ----DLEVLELRSNSLTGHIPTDISHLSHLNVLDL-----SINNLTGEIPDEISKCSSLR 633
LE L + N + G + L +L L L S+ LT E ++ S L
Sbjct: 326 QWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAH-SPLH 384
Query: 634 SLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLSGEI 670
L + N +S D+ + L +L VLDL N + E+
Sbjct: 385 ILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQEL 421
Score = 37.4 bits (85), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
Query: 573 SIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSL 632
++ E+ +CS L++ ++ + +PT+I+ VL+L+ N L ++ S L
Sbjct: 3 TVSHEVADCSHLKLTQVPDD-----LPTNIT------VLNLTHNQLRRLPAANFTRYSQL 51
Query: 633 RSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLSGEIPANLSSIFGLMNFNVSSNNLQA 692
SL V N +S P+ KL L VL+L N LS + L ++ SN++Q
Sbjct: 52 TSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQK 111
Query: 693 FANN 696
NN
Sbjct: 112 IKNN 115
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 172/442 (38%), Gaps = 74/442 (16%)
Query: 269 PSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGN 328
P ++V+ L N + ++ C+++ + L L N I+ + L LD+S N
Sbjct: 73 PMLKVLNLQHNELSQLSDKTFAFCTNLTE-LHLMSNSIQKIKNNPFVKQKNLITLDLSHN 131
Query: 329 SISG-KIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEF-- 385
+S K+ Q+ L+EL ++NN E+ ++ SL LE + S +I EF
Sbjct: 132 GLSSTKLGTQVQLE-NLQELLLSNNKIQALKSEELDIFANSSLKKLELS--SNQIKEFSP 188
Query: 386 -----LGDIRGL--KSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMN 438
+G + GL ++ L +L + + N + NL+L ++ LS + LG+
Sbjct: 189 GCFHAIGRLFGLFLNNVQLGPSL-TEKLCLELAN-TSIRNLSLSNSQLSTTSNTTFLGLK 246
Query: 439 --NLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGN----AFSGRIPAXXXXXXXXXXXX 492
NL+ LDLS N + S L QL F L N FS +
Sbjct: 247 WTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRS 306
Query: 493 XXXQNFS-GELP----IELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFV 547
Q+ S LP L L+ + +++N + G F+ L++L+YL+LS N F
Sbjct: 307 FTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLS-NSFT 365
Query: 548 GQIPATXXXXXXXXXXXXXGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSH 607
T +S + P L +L L N ++ S L H
Sbjct: 366 SLRTLTNETF------------VSLAHSP-------LHILNLTKNKISKIESDAFSWLGH 406
Query: 608 LNVLDLSINNLTGEIP-------------------------DEISKCSSLRSLLVNSNHL 642
L VLDL +N + E+ + + SL+ L++ L
Sbjct: 407 LEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVAL 466
Query: 643 SG--GIPDSLAKLSNLAVLDLS 662
P L NL +LDLS
Sbjct: 467 KNVDSSPSPFQPLRNLTILDLS 488
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 116/492 (23%), Positives = 181/492 (36%), Gaps = 110/492 (22%)
Query: 153 EIANDLPRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAI 212
++ +DLP N+ +L+ N R +PA +
Sbjct: 18 QVPDDLPTNITVLNLTHNQL-------------------------RRLPA-------ANF 45
Query: 213 ANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASM-FCNVSGYPPSI 271
S L L N + + P LP L+V++L N LS + + FC
Sbjct: 46 TRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFC--------- 96
Query: 272 RVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSIS 331
TN L L L N I+ + L LD+S N +S
Sbjct: 97 ----------TN------------LTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLS 134
Query: 332 G-KIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEF----- 385
K+ Q+ L+EL ++NN E+ ++ SL LE + S +I EF
Sbjct: 135 STKLGTQVQLE-NLQELLLSNNKIQALKSEELDIFANSSLKKLELS--SNQIKEFSPGCF 191
Query: 386 --LGDIRG--LKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMN--N 439
+G + G L ++ L +L + + N + NL+L ++ LS + LG+ N
Sbjct: 192 HAIGRLFGLFLNNVQLGPSL-TEKLCLELAN-TSIRNLSLSNSQLSTTSNTTFLGLKWTN 249
Query: 440 LSTLDLSENKFSGEVPASIGNLSQLMVFNLSGN----AFSGRIPAXXXXXXXXXXXXXXX 495
L+ LDLS N + S L QL F L N FS +
Sbjct: 250 LTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTK 309
Query: 496 QNFS-GELP----IELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQI 550
Q+ S LP L L+ + +++N + G F+ L++L+YL+LS N F
Sbjct: 310 QSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLS-NSFTSLR 368
Query: 551 PATXXXXXXXXXXXXXGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNV 610
T +S + P L +L L N ++ S L HL V
Sbjct: 369 TLTNETF------------VSLAHSP-------LHILNLTKNKISKIESDAFSWLGHLEV 409
Query: 611 LDLSINNLTGEI 622
LDL +N + E+
Sbjct: 410 LDLGLNEIGQEL 421
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 15/181 (8%)
Query: 841 DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHV 900
D+ L +KE L RHRN+ L + +L +++++++ G + E +
Sbjct: 44 DQVLVKKEISILNIARHRNILHLHESFESMEEL-VMIFEFIS----GLDIFERINTSAFE 98
Query: 901 LNWPMRHLIAL--GVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLS--DFGLDRLXXX 956
LN R +++ V L FLH+ N+ H DI+P+N+++ + + +FG R
Sbjct: 99 LN--EREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156
Query: 957 XXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIV 1016
Y +PE + +D++S G ++ LL+G P + ++ I+
Sbjct: 157 GDNFRLLFTAP----EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQII 212
Query: 1017 K 1017
+
Sbjct: 213 E 213
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 16/167 (9%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLL-QEASHQDGHVLNWPM 905
+E L +V H N+ L Y D+ +L+ + + G L L Q+ S + ++
Sbjct: 64 REVSILRQVLHPNIITLHDVYENRTDV-VLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 906 RHLIALGVARGLAFLHTSNMVHGDIKPQNV-LFDADF---EAHLSDFGLDRLXXXXXXXX 961
+ + G+ +LHT + H D+KP+N+ L D + L DFGL
Sbjct: 123 Q------ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL----AHEIEDG 172
Query: 962 XXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVM 1008
GT +V+PE E+D++S G++ LL+G P +
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 54/209 (25%), Positives = 83/209 (39%), Gaps = 39/209 (18%)
Query: 817 GLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLL 876
GL F A + LS R D +EA K++H N+ L L
Sbjct: 31 GLEFAAKIINTKKLSAR-------DFQKLEREARICRKLQHPNIVRLHDSIQ-EESFHYL 82
Query: 877 VYDYMPNGNLGTLL--------QEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHG 928
V+D + G L + +ASH +L +A+ H++ +VH
Sbjct: 83 VFDLVTGGELFEDIVAREFYSEADASHCIQQIL-------------ESIAYCHSNGIVHR 129
Query: 929 DIKPQNVLFDADFEA---HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETT 985
++KP+N+L + + L+DFGL GT GY+SPE +
Sbjct: 130 NLKPENLLLASKAKGAAVKLADFGL----AIEVNDSEAWHGFAGTPGYLSPEVLKKDPYS 185
Query: 986 KESDVYSFGIVLLELLTGKRPVMFTQDED 1014
K D+++ G++L LL G P DED
Sbjct: 186 KPVDIWACGVILYILLVGYPPFW---DED 211
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 54/209 (25%), Positives = 83/209 (39%), Gaps = 39/209 (18%)
Query: 817 GLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLL 876
GL F A + LS R D +EA K++H N+ L L
Sbjct: 30 GLEFAAKIINTKKLSAR-------DFQKLEREARICRKLQHPNIVRLHDSIQ-EESFHYL 81
Query: 877 VYDYMPNGNLGTLL--------QEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHG 928
V+D + G L + +ASH +L +A+ H++ +VH
Sbjct: 82 VFDLVTGGELFEDIVAREFYSEADASHCIQQIL-------------ESIAYCHSNGIVHR 128
Query: 929 DIKPQNVLFDADFEA---HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETT 985
++KP+N+L + + L+DFGL GT GY+SPE +
Sbjct: 129 NLKPENLLLASKAKGAAVKLADFGL----AIEVNDSEAWHGFAGTPGYLSPEVLKKDPYS 184
Query: 986 KESDVYSFGIVLLELLTGKRPVMFTQDED 1014
K D+++ G++L LL G P DED
Sbjct: 185 KPVDIWACGVILYILLVGYPPFW---DED 210
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 54/209 (25%), Positives = 83/209 (39%), Gaps = 39/209 (18%)
Query: 817 GLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLL 876
GL F A + LS R D +EA K++H N+ L L
Sbjct: 31 GLEFAAKIINTKKLSAR-------DFQKLEREARICRKLQHPNIVRLHDSIQ-EESFHYL 82
Query: 877 VYDYMPNGNLGTLL--------QEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHG 928
V+D + G L + +ASH +L +A+ H++ +VH
Sbjct: 83 VFDLVTGGELFEDIVAREFYSEADASHCIQQIL-------------ESIAYCHSNGIVHR 129
Query: 929 DIKPQNVLFDADFEA---HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETT 985
++KP+N+L + + L+DFGL GT GY+SPE +
Sbjct: 130 NLKPENLLLASKAKGAAVKLADFGL----AIEVNDSEAWHGFAGTPGYLSPEVLKKDPYS 185
Query: 986 KESDVYSFGIVLLELLTGKRPVMFTQDED 1014
K D+++ G++L LL G P DED
Sbjct: 186 KPVDIWACGVILYILLVGYPPFW---DED 211
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 14/178 (7%)
Query: 857 HRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ---------EASHQDGHVLNWPMRH 907
H N+ L G +++ ++ GNL T L+ + + +D + + H
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 908 LI--ALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXX 965
LI + VA+G+ FL + +H D+ +N+L + DFGL R
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD 209
Query: 966 XXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQ-DEDIVKWVKK 1021
+ L +++PE T +SDV+SFG++L E+ + G P + DE+ + +K+
Sbjct: 210 ARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 14/178 (7%)
Query: 857 HRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ---------EASHQDGHVLNWPMRH 907
H N+ L G +++ ++ GNL T L+ + + +D + + H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 908 LI--ALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXX 965
LI + VA+G+ FL + +H D+ +N+L + DFGL R
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 966 XXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQ-DEDIVKWVKK 1021
+ L +++PE T +SDV+SFG++L E+ + G P + DE+ + +K+
Sbjct: 201 ARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 176/422 (41%), Gaps = 57/422 (13%)
Query: 65 NNRVTELRLPRLQLSGRISDHLSNLRM--LRKLSLRSNSFNGTIPATLAQCTLLRAVFLQ 122
N + L L QLS + L+ L L L N+ N + A L FL+
Sbjct: 231 NTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLE 290
Query: 123 YNSLSGNLPANIGNLSNLEILNVAANRLSGEIA-NDLPR----------NLKYFDLSSN- 170
YN++ ++ L N+ LN+ + I+ LP+ L++ ++ N
Sbjct: 291 YNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDND 350
Query: 171 --GFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSLVH-LSAQGNA 227
G + T + NL L L N SF TF ++ S +H L+ N
Sbjct: 351 IPGIKSNMFTGLINLKYLSLSN-SFTSLRTLTNETF-------VSLAHSPLHILNLTKNK 402
Query: 228 LGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSG----YPPSIRVVQLGFNAFTN 283
+ + A L L+V+ L N + + + + Y + +QL N+F
Sbjct: 403 ISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFAL 462
Query: 284 VAGPETGSCSSVLQVLDLQQNQIRG--AFPLWLTRASTLTRLDVSGNSISGKIPAQIGGL 341
V LQ L L++ ++ + P LT LD+S N+I+ + GL
Sbjct: 463 VPS---------LQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGL 513
Query: 342 WRLEELKMANNSF---------GGAVPVEIKQCSSLSLLDLEGNRFSGEIP-EFLGDIRG 391
+LE L + +N+ GG + +K S L +L+LE N F EIP E D+
Sbjct: 514 EKLEILDLQHNNLARLWKHANPGGPIYF-LKGLSHLHILNLESNGF-DEIPVEVFKDLFE 571
Query: 392 LKSLTLAANLFSGSIPAS-FRNLPGLENLNLRHNSLSGSLPEEVLG--MNNLSTLDLSEN 448
LK + L N ++PAS F N L++LNL+ N L S+ ++V G NL+ LD+ N
Sbjct: 572 LKIIDLGLNNL-NTLPASVFNNQVSLKSLNLQKN-LITSVEKKVFGPAFRNLTELDMRFN 629
Query: 449 KF 450
F
Sbjct: 630 PF 631
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 154/397 (38%), Gaps = 24/397 (6%)
Query: 296 LQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFG 355
+ VL+L NQ+R TR S LT LDV N+IS P L L+ L + +N
Sbjct: 37 ITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS 96
Query: 356 GAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPG 415
C++L+ L L N + L +L L+ N S + + L
Sbjct: 97 QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLEN 156
Query: 416 LENLNLRHNSLSGSLPEE--VLGMNNLSTLDLSENK---FSGEVPASIGNLSQLMVFNLS 470
L+ L L +N + EE + ++L L+LS N+ FS +IG L L + N+
Sbjct: 157 LQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQ 216
Query: 471 -GNAFSGRIPAXXXXXXXXXXXXXXXQNFSGELPIELAGLP--NLQVIALQENKLSGNVP 527
G + + ++ Q S GL NL ++ L N L+
Sbjct: 217 LGPSLTEKLCLELANTSIRNLSLSNSQ-LSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGN 275
Query: 528 EGFSSLMSLRYLNLSFNG----FVGQIPATXXXXXXXXXXXXXGNHISGSIPPELGNCS- 582
+ F+ L L Y L +N F + IS + P++ + S
Sbjct: 276 DSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSF 335
Query: 583 ----DLEVLELRSNSLTGHIPTDISHLSHLNVLDL-----SINNLTGEIPDEISKCSSLR 633
LE L + N + G + L +L L L S+ LT E ++ S L
Sbjct: 336 QWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAH-SPLH 394
Query: 634 SLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLSGEI 670
L + N +S D+ + L +L VLDL N + E+
Sbjct: 395 ILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQEL 431
Score = 37.0 bits (84), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
Query: 573 SIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSL 632
++ E+ +CS L++ ++ + +PT+I+ VL+L+ N L ++ S L
Sbjct: 13 TVSHEVADCSHLKLTQVPDD-----LPTNIT------VLNLTHNQLRRLPAANFTRYSQL 61
Query: 633 RSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLSGEIPANLSSIFGLMNFNVSSNNLQA 692
SL V N +S P+ KL L VL+L N LS + L ++ SN++Q
Sbjct: 62 TSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQK 121
Query: 693 FANN 696
NN
Sbjct: 122 IKNN 125
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 172/440 (39%), Gaps = 70/440 (15%)
Query: 269 PSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGN 328
P ++V+ L N + ++ C+++ + L L N I+ + L LD+S N
Sbjct: 83 PMLKVLNLQHNELSQLSDKTFAFCTNLTE-LHLMSNSIQKIKNNPFVKQKNLITLDLSHN 141
Query: 329 SISG-KIPAQIGGLWRLEELKMANNSFGG--AVPVEIKQCSSLSLLDLEGNR---FSGEI 382
+S K+ Q+ L+EL ++NN + ++I SSL L+L N+ FS
Sbjct: 142 GLSSTKLGTQVQLE-NLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGC 200
Query: 383 PEFLGDIRGL--KSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMN-- 438
+G + GL ++ L +L + + N + NL+L ++ LS + LG+
Sbjct: 201 FHAIGRLFGLFLNNVQLGPSL-TEKLCLELAN-TSIRNLSLSNSQLSTTSNTTFLGLKWT 258
Query: 439 NLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGN----AFSGRIPAXXXXXXXXXXXXXX 494
NL+ LDLS N + S L QL F L N FS +
Sbjct: 259 NLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFT 318
Query: 495 XQNFS-GELP----IELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQ 549
Q+ S LP L L+ + +++N + G F+ L++L+YL+LS N F
Sbjct: 319 KQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLS-NSFTSL 377
Query: 550 IPATXXXXXXXXXXXXXGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLN 609
T +S + P L +L L N ++ S L HL
Sbjct: 378 RTLTNETF------------VSLAHSP-------LHILNLTKNKISKIESDAFSWLGHLE 418
Query: 610 VLDLSINNLTGEIP-------------------------DEISKCSSLRSLLVNSNHLSG 644
VLDL +N + E+ + + SL+ L++ L
Sbjct: 419 VLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKN 478
Query: 645 --GIPDSLAKLSNLAVLDLS 662
P L NL +LDLS
Sbjct: 479 VDSSPSPFQPLRNLTILDLS 498
Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 116/490 (23%), Positives = 181/490 (36%), Gaps = 106/490 (21%)
Query: 153 EIANDLPRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAI 212
++ +DLP N+ +L+ N R +PA +
Sbjct: 28 QVPDDLPTNITVLNLTHNQL-------------------------RRLPA-------ANF 55
Query: 213 ANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASM-FCNVSGYPPSI 271
S L L N + + P LP L+V++L N LS + + FC
Sbjct: 56 TRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFC--------- 106
Query: 272 RVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSIS 331
TN L L L N I+ + L LD+S N +S
Sbjct: 107 ----------TN------------LTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLS 144
Query: 332 G-KIPAQIGGLWRLEELKMANNSFGG--AVPVEIKQCSSLSLLDLEGNR---FSGEIPEF 385
K+ Q+ L+EL ++NN + ++I SSL L+L N+ FS
Sbjct: 145 STKLGTQVQLE-NLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHA 203
Query: 386 LGDIRG--LKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMN--NLS 441
+G + G L ++ L +L + + N + NL+L ++ LS + LG+ NL+
Sbjct: 204 IGRLFGLFLNNVQLGPSL-TEKLCLELAN-TSIRNLSLSNSQLSTTSNTTFLGLKWTNLT 261
Query: 442 TLDLSENKFSGEVPASIGNLSQLMVFNLSGN----AFSGRIPAXXXXXXXXXXXXXXXQN 497
LDLS N + S L QL F L N FS + Q+
Sbjct: 262 MLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQS 321
Query: 498 FS-GELP----IELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPA 552
S LP L L+ + +++N + G F+ L++L+YL+LS N F
Sbjct: 322 ISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLS-NSFTSLRTL 380
Query: 553 TXXXXXXXXXXXXXGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLD 612
T +S + P L +L L N ++ S L HL VLD
Sbjct: 381 TNETF------------VSLAHSP-------LHILNLTKNKISKIESDAFSWLGHLEVLD 421
Query: 613 LSINNLTGEI 622
L +N + E+
Sbjct: 422 LGLNEIGQEL 431
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 87/225 (38%), Gaps = 35/225 (15%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVL 863
F+E VL + +G V KA D +I+++ + E L + H+ V+
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQ--YVV 65
Query: 864 RGYYAGAPDLRLLV---------------YDYMPNGNLGTLLQEASHQDGHVLNWPMRHL 908
R YYA + R V +Y NG L L+ + W +
Sbjct: 66 R-YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQ 124
Query: 909 IALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFG--------LDRLXXXXXX- 959
I L+++H+ ++H D+KP N+ D + DFG LD L
Sbjct: 125 IL----EALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 960 --XXXXXXXXVGTLGYVSPEAAL-TGETTKESDVYSFGIVLLELL 1001
+GT YV+ E TG ++ D+YS GI+ E++
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase
A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase
A (Pka)
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y P G + + L+ P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYAPGGEMFSHLRRIGR-----FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
+ D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 173 MIDQQGYIKVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-Phenyl-C-(4-(
9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (1-(9h-Purin-6-
Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (1-(9h-Purin-6-
Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y P G + + L+ P A + +LH+ ++++ D+KP+N+
Sbjct: 119 MVMEYAPGGEMFSHLRRIGR-----FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 173
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
+ D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 174 MIDQQGYIKVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 228 LIYEMAAGYPP--FFADQPI 245
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein
Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 59/136 (43%), Gaps = 11/136 (8%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+ G + + L+ P A + +LH+ ++++ D+KP+N+
Sbjct: 139 MVMEYVAGGEMFSHLRRIGR-----FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 193
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 194 LIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 247
Query: 996 VLLELLTGKRPVMFTQ 1011
++ E+ G P Q
Sbjct: 248 LIYEMAAGYPPFFADQ 263
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp
Length = 423
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQ-EASHQDGHV 900
+E + V H+N+ L + L LV + M + NL ++Q E H+
Sbjct: 110 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY 168
Query: 901 LNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXX 960
L + M G+ LH++ ++H D+KP N++ +D + DFGL R
Sbjct: 169 LLYQM--------LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGT 216
Query: 961 XXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
V T Y +PE L + D++S G ++ E++ K ++F + I +W K
Sbjct: 217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRDYIDQWNK 274
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ LH++ ++H D+KP N++ +D + DFGL R V T Y +
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMEPEVVTRYYRA 193
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
PE L + D++S G ++ E++ K ++F + I +W K
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVCHK--ILFPGRDYIDQWNK 236
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 176/422 (41%), Gaps = 57/422 (13%)
Query: 65 NNRVTELRLPRLQLSGRISDHLSNLRM--LRKLSLRSNSFNGTIPATLAQCTLLRAVFLQ 122
N + L L QLS + L+ L L L N+ N + A L FL+
Sbjct: 226 NTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLE 285
Query: 123 YNSLSGNLPANIGNLSNLEILNVAANRLSGEIA-NDLPR----------NLKYFDLSSN- 170
YN++ ++ L N+ LN+ + I+ LP+ L++ ++ N
Sbjct: 286 YNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDND 345
Query: 171 --GFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSLVH-LSAQGNA 227
G + T + NL L L N SF TF ++ S +H L+ N
Sbjct: 346 IPGIKSNMFTGLINLKYLSLSN-SFTSLRTLTNETF-------VSLAHSPLHILNLTKNK 397
Query: 228 LGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSG----YPPSIRVVQLGFNAFTN 283
+ + A L L+V+ L N + + + + Y + +QL N+F
Sbjct: 398 ISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFAL 457
Query: 284 VAGPETGSCSSVLQVLDLQQNQIRG--AFPLWLTRASTLTRLDVSGNSISGKIPAQIGGL 341
V LQ L L++ ++ + P LT LD+S N+I+ + GL
Sbjct: 458 VPS---------LQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGL 508
Query: 342 WRLEELKMANNSF---------GGAVPVEIKQCSSLSLLDLEGNRFSGEIP-EFLGDIRG 391
+LE L + +N+ GG + +K S L +L+LE N F EIP E D+
Sbjct: 509 EKLEILDLQHNNLARLWKHANPGGPIYF-LKGLSHLHILNLESNGF-DEIPVEVFKDLFE 566
Query: 392 LKSLTLAANLFSGSIPAS-FRNLPGLENLNLRHNSLSGSLPEEVLG--MNNLSTLDLSEN 448
LK + L N ++PAS F N L++LNL+ N L S+ ++V G NL+ LD+ N
Sbjct: 567 LKIIDLGLNNL-NTLPASVFNNQVSLKSLNLQKN-LITSVEKKVFGPAFRNLTELDMRFN 624
Query: 449 KF 450
F
Sbjct: 625 PF 626
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 154/397 (38%), Gaps = 24/397 (6%)
Query: 296 LQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFG 355
+ VL+L NQ+R TR S LT LDV N+IS P L L+ L + +N
Sbjct: 32 ITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS 91
Query: 356 GAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPG 415
C++L+ L L N + L +L L+ N S + + L
Sbjct: 92 QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLEN 151
Query: 416 LENLNLRHNSLSGSLPEE--VLGMNNLSTLDLSENK---FSGEVPASIGNLSQLMVFNLS 470
L+ L L +N + EE + ++L L+LS N+ FS +IG L L + N+
Sbjct: 152 LQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQ 211
Query: 471 -GNAFSGRIPAXXXXXXXXXXXXXXXQNFSGELPIELAGLP--NLQVIALQENKLSGNVP 527
G + + ++ Q S GL NL ++ L N L+
Sbjct: 212 LGPSLTEKLCLELANTSIRNLSLSNSQ-LSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGN 270
Query: 528 EGFSSLMSLRYLNLSFNG----FVGQIPATXXXXXXXXXXXXXGNHISGSIPPELGNCS- 582
+ F+ L L Y L +N F + IS + P++ + S
Sbjct: 271 DSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSF 330
Query: 583 ----DLEVLELRSNSLTGHIPTDISHLSHLNVLDL-----SINNLTGEIPDEISKCSSLR 633
LE L + N + G + L +L L L S+ LT E ++ S L
Sbjct: 331 QWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAH-SPLH 389
Query: 634 SLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLSGEI 670
L + N +S D+ + L +L VLDL N + E+
Sbjct: 390 ILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQEL 426
Score = 37.0 bits (84), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
Query: 573 SIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSL 632
++ E+ +CS L++ ++ + +PT+I+ VL+L+ N L ++ S L
Sbjct: 8 TVSHEVADCSHLKLTQVPDD-----LPTNIT------VLNLTHNQLRRLPAANFTRYSQL 56
Query: 633 RSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLSGEIPANLSSIFGLMNFNVSSNNLQA 692
SL V N +S P+ KL L VL+L N LS + L ++ SN++Q
Sbjct: 57 TSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQK 116
Query: 693 FANN 696
NN
Sbjct: 117 IKNN 120
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 172/440 (39%), Gaps = 70/440 (15%)
Query: 269 PSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGN 328
P ++V+ L N + ++ C+++ + L L N I+ + L LD+S N
Sbjct: 78 PMLKVLNLQHNELSQLSDKTFAFCTNLTE-LHLMSNSIQKIKNNPFVKQKNLITLDLSHN 136
Query: 329 SISG-KIPAQIGGLWRLEELKMANNSFGG--AVPVEIKQCSSLSLLDLEGNR---FSGEI 382
+S K+ Q+ L+EL ++NN + ++I SSL L+L N+ FS
Sbjct: 137 GLSSTKLGTQVQLE-NLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGC 195
Query: 383 PEFLGDIRGL--KSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMN-- 438
+G + GL ++ L +L + + N + NL+L ++ LS + LG+
Sbjct: 196 FHAIGRLFGLFLNNVQLGPSL-TEKLCLELAN-TSIRNLSLSNSQLSTTSNTTFLGLKWT 253
Query: 439 NLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGN----AFSGRIPAXXXXXXXXXXXXXX 494
NL+ LDLS N + S L QL F L N FS +
Sbjct: 254 NLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFT 313
Query: 495 XQNFS-GELP----IELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQ 549
Q+ S LP L L+ + +++N + G F+ L++L+YL+LS N F
Sbjct: 314 KQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLS-NSFTSL 372
Query: 550 IPATXXXXXXXXXXXXXGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLN 609
T +S + P L +L L N ++ S L HL
Sbjct: 373 RTLTNETF------------VSLAHSP-------LHILNLTKNKISKIESDAFSWLGHLE 413
Query: 610 VLDLSINNLTGEIP-------------------------DEISKCSSLRSLLVNSNHLSG 644
VLDL +N + E+ + + SL+ L++ L
Sbjct: 414 VLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKN 473
Query: 645 --GIPDSLAKLSNLAVLDLS 662
P L NL +LDLS
Sbjct: 474 VDSSPSPFQPLRNLTILDLS 493
Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 116/490 (23%), Positives = 181/490 (36%), Gaps = 106/490 (21%)
Query: 153 EIANDLPRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAI 212
++ +DLP N+ +L+ N R +PA +
Sbjct: 23 QVPDDLPTNITVLNLTHNQL-------------------------RRLPA-------ANF 50
Query: 213 ANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASM-FCNVSGYPPSI 271
S L L N + + P LP L+V++L N LS + + FC
Sbjct: 51 TRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFC--------- 101
Query: 272 RVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSIS 331
TN L L L N I+ + L LD+S N +S
Sbjct: 102 ----------TN------------LTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLS 139
Query: 332 G-KIPAQIGGLWRLEELKMANNSFGG--AVPVEIKQCSSLSLLDLEGNR---FSGEIPEF 385
K+ Q+ L+EL ++NN + ++I SSL L+L N+ FS
Sbjct: 140 STKLGTQVQLE-NLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHA 198
Query: 386 LGDIRG--LKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMN--NLS 441
+G + G L ++ L +L + + N + NL+L ++ LS + LG+ NL+
Sbjct: 199 IGRLFGLFLNNVQLGPSL-TEKLCLELAN-TSIRNLSLSNSQLSTTSNTTFLGLKWTNLT 256
Query: 442 TLDLSENKFSGEVPASIGNLSQLMVFNLSGN----AFSGRIPAXXXXXXXXXXXXXXXQN 497
LDLS N + S L QL F L N FS + Q+
Sbjct: 257 MLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQS 316
Query: 498 FS-GELP----IELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPA 552
S LP L L+ + +++N + G F+ L++L+YL+LS N F
Sbjct: 317 ISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLS-NSFTSLRTL 375
Query: 553 TXXXXXXXXXXXXXGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLD 612
T +S + P L +L L N ++ S L HL VLD
Sbjct: 376 TNETF------------VSLAHSP-------LHILNLTKNKISKIESDAFSWLGHLEVLD 416
Query: 613 LSINNLTGEI 622
L +N + E+
Sbjct: 417 LGLNEIGQEL 426
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 14/178 (7%)
Query: 857 HRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ---------EASHQDGHVLNWPMRH 907
H N+ L G +++ ++ GNL T L+ + + +D + + H
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 186
Query: 908 LI--ALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXX 965
LI + VA+G+ FL + +H D+ +N+L + DFGL R
Sbjct: 187 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 246
Query: 966 XXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQ-DEDIVKWVKK 1021
+ L +++PE T +SDV+SFG++L E+ + G P + DE+ + +K+
Sbjct: 247 ARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 303
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 14/178 (7%)
Query: 857 HRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ---------EASHQDGHVLNWPMRH 907
H N+ L G +++ ++ GNL T L+ + + +D + + H
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 908 LI--ALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXX 965
LI + VA+G+ FL + +H D+ +N+L + DFGL R
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 209
Query: 966 XXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQ-DEDIVKWVKK 1021
+ L +++PE T +SDV+SFG++L E+ + G P + DE+ + +K+
Sbjct: 210 ARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 8/145 (5%)
Query: 871 PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDI 930
PD V +++ G+L +Q++ D + +I+ L FLH +++ D+
Sbjct: 96 PDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIIS-----ALMFLHDKGIIYRDL 150
Query: 931 KPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDV 990
K NVL D + L+DFG+ + GT Y++PE D
Sbjct: 151 KLDNVLLDHEGHCKLADFGMCK---EGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDW 207
Query: 991 YSFGIVLLELLTGKRPVMFTQDEDI 1015
++ G++L E+L G P ++D+
Sbjct: 208 WAMGVLLYEMLCGHAPFEAENEDDL 232
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 14/166 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMR 906
+E L ++RH N+ L + D+ +L+ + + G L L E ++
Sbjct: 64 REVNILREIRHPNIITLHDIFENKTDV-VLILELVSGGELFDFLAEKESLTEDEATQFLK 122
Query: 907 HLIALGVARGLAFLHTSNMVHGDIKPQNV-LFDADF---EAHLSDFGLDRLXXXXXXXXX 962
++ G+ +LH+ + H D+KP+N+ L D + L DFG+
Sbjct: 123 QIL-----DGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI----AHKIEAGN 173
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVM 1008
GT +V+PE E+D++S G++ LL+G P +
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3
(Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3
(Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 14/166 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMR 906
+E L ++RH N+ L + D+ +L+ + + G L L E ++
Sbjct: 57 REVNILREIRHPNIITLHDIFENKTDV-VLILELVSGGELFDFLAEKESLTEDEATQFLK 115
Query: 907 HLIALGVARGLAFLHTSNMVHGDIKPQNV-LFDADF---EAHLSDFGLDRLXXXXXXXXX 962
++ G+ +LH+ + H D+KP+N+ L D + L DFG+
Sbjct: 116 QIL-----DGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI----AHKIEAGN 166
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVM 1008
GT +V+PE E+D++S G++ LL+G P +
Sbjct: 167 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 212
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 14/178 (7%)
Query: 857 HRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ---------EASHQDGHVLNWPMRH 907
H N+ L G +++ ++ GNL T L+ + + +D + + H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 908 LI--ALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXX 965
LI + VA+G+ FL + +H D+ +N+L + DFGL R
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 966 XXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQ-DEDIVKWVKK 1021
+ L +++PE T +SDV+SFG++L E+ + G P + DE+ + +K+
Sbjct: 201 ARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 14/178 (7%)
Query: 857 HRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQ---------EASHQDGHVLNWPMRH 907
H N+ L G +++ ++ GNL T L+ + + +D + + H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 908 LI--ALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXX 965
LI + VA+G+ FL + +H D+ +N+L + DFGL R
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 966 XXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQ-DEDIVKWVKK 1021
+ L +++PE T +SDV+SFG++L E+ + G P + DE+ + +K+
Sbjct: 201 ARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 14/166 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMR 906
+E L ++RH N+ L + D+ +L+ + + G L L E ++
Sbjct: 78 REVNILREIRHPNIITLHDIFENKTDV-VLILELVSGGELFDFLAEKESLTEDEATQFLK 136
Query: 907 HLIALGVARGLAFLHTSNMVHGDIKPQNV-LFDADF---EAHLSDFGLDRLXXXXXXXXX 962
++ G+ +LH+ + H D+KP+N+ L D + L DFG+
Sbjct: 137 QIL-----DGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI----AHKIEAGN 187
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVM 1008
GT +V+PE E+D++S G++ LL+G P +
Sbjct: 188 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 233
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 896 QDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXX 955
+D +VL + A VA+G+ FL + VH D+ +NVL + DFGL R
Sbjct: 164 EDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 956 XXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +++PE+ G T +SDV+S+GI+L E+ +
Sbjct: 224 SDSNYVVRGNARL-PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 14/178 (7%)
Query: 857 HRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQ---------DGHVLNWPMRH 907
H N+ L G +++ ++ GNL T L+ ++ D + + H
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEH 151
Query: 908 LI--ALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXX 965
LI + VA+G+ FL + +H D+ +N+L + DFGL R
Sbjct: 152 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 211
Query: 966 XXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQ-DEDIVKWVKK 1021
+ L +++PE T +SDV+SFG++L E+ + G P + DE+ + +K+
Sbjct: 212 ARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 268
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 11/160 (6%)
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH LT L+ Y D V +Y N G L S + V + +
Sbjct: 206 RHPFLTALK-YSFQTHDRLCFVMEY---ANGGELFFHLSRE--RVFSEDRARFYGAEIVS 259
Query: 916 GLAFLHTS-NMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
L +LH+ N+V+ D+K +N++ D D ++DFGL + GT Y+
Sbjct: 260 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKTFCGTPEYL 316
Query: 975 SPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDED 1014
+PE + + D + G+V+ E++ G+ P + QD +
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP-FYNQDHE 355
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 55/130 (42%), Gaps = 16/130 (12%)
Query: 909 IALGVARGLAFLHTS-NMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
I L + L L + ++H DIKP N+L D L DFG+
Sbjct: 130 ITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS----GQLVDSIAKTRD 185
Query: 968 VGTLGYVSPE-----AALTGETTKESDVYSFGIVLLELLTGKRPV-----MFTQDEDIVK 1017
G Y++PE A+ G + SDV+S GI L EL TG+ P +F Q +VK
Sbjct: 186 AGCRPYMAPERIDPSASRQGYDVR-SDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK 244
Query: 1018 WVKKQLQKGQ 1027
QL +
Sbjct: 245 GDPPQLSNSE 254
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor
Length = 446
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 11/160 (6%)
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
RH LT L+ Y D V +Y N G L S + V + +
Sbjct: 209 RHPFLTALK-YSFQTHDRLCFVMEY---ANGGELFFHLSRE--RVFSEDRARFYGAEIVS 262
Query: 916 GLAFLHT-SNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
L +LH+ N+V+ D+K +N++ D D ++DFGL + GT Y+
Sbjct: 263 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKTFCGTPEYL 319
Query: 975 SPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDED 1014
+PE + + D + G+V+ E++ G+ P + QD +
Sbjct: 320 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP-FYNQDHE 358
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+ G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAK------RVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase
Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 12/105 (11%)
Query: 909 IALGVARGLAFLHTSN-MVHGDIKPQNVLFDADFEAHLSDFGLD-RLXXXXXXXXXXXXX 966
+ + + + L +L + ++H D+KP N+L D + L DFG+ RL
Sbjct: 129 MTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRL-----VDDKAKDR 183
Query: 967 XVGTLGYVSPEAALTGETTK-----ESDVYSFGIVLLELLTGKRP 1006
G Y++PE + TK +DV+S GI L+EL TG+ P
Sbjct: 184 SAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 30/217 (13%)
Query: 809 NVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEF--LGKVRHRNLTVLRGY 866
V+ T + L +A Y ++++ L + + L +EF L +V H ++ L G
Sbjct: 38 KVVKATAFHLKGRAGYT---TVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGA 94
Query: 867 YAGAPDLRLLVYDYMPNGNLGTLLQEA-------------------SHQDGHVLNWPMRH 907
+ L LL+ +Y G+L L+E+ H D L M
Sbjct: 95 CSQDGPL-LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT--MGD 151
Query: 908 LI--ALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXX 965
LI A +++G+ +L +VH D+ +N+L + +SDFGL R
Sbjct: 152 LISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQ 211
Query: 966 XXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +++ E+ T +SDV+SFG++L E++T
Sbjct: 212 GRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 97/245 (39%), Gaps = 48/245 (19%)
Query: 206 GTLPSAI-ANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGV----VPASM 260
+LP I N L LS N L + A LQ + L+ N L+ V +P+
Sbjct: 136 SSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLF 195
Query: 261 FCNVS-------GYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLW 313
NVS P ++ + N+ V GP + L +L LQ N + W
Sbjct: 196 HANVSYNLLSTLAIPIAVEELDASHNSINVVRGP----VNVELTILKLQHNNLTDT--AW 249
Query: 314 LTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNS------FGGAVP-VEIKQCS 366
L L +D+S N + + + RLE L ++NN +G +P +++ S
Sbjct: 250 LLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLS 309
Query: 367 SLSLLDLEGNRFSGEIPEF-----------------LGDIRGLKSLTLAANLFS-GSIPA 408
LL +E N+ P+F L LK+LTL+ N + S+ A
Sbjct: 310 HNHLLHVERNQ-----PQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDCNSLRA 364
Query: 409 SFRNL 413
FRN+
Sbjct: 365 LFRNV 369
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQ-EASHQDGHV 900
+E + V H+N+ L + L LV + M + NL ++Q E H+
Sbjct: 66 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY 124
Query: 901 LNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXX 960
L + M G+ LH++ ++H D+KP N++ +D + DFGL R
Sbjct: 125 LLYQM--------LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGT 172
Query: 961 XXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
V T Y +PE L + D++S G ++ E++ K ++F + I +W K
Sbjct: 173 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRDYIDQWNK 230
Query: 1021 KQLQKG 1026
Q G
Sbjct: 231 VIEQLG 236
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQ-EASHQDGHV 900
+E + V H+N+ L + L LV + M + NL ++Q E H+
Sbjct: 73 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY 131
Query: 901 LNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXX 960
L + M G+ LH++ ++H D+KP N++ +D + DFGL R
Sbjct: 132 LLYQM--------LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGT 179
Query: 961 XXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
V T Y +PE L + D++S G ++ E++ K ++F + I +W K
Sbjct: 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRDYIDQWNK 237
Query: 1021 KQLQKG 1026
Q G
Sbjct: 238 VIEQLG 243
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole
Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQ-EASHQDGHV 900
+E + V H+N+ L + L LV + M + NL ++Q E H+
Sbjct: 71 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY 129
Query: 901 LNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXX 960
L + M G+ LH++ ++H D+KP N++ +D + DFGL R
Sbjct: 130 LLYQM--------LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGT 177
Query: 961 XXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
V T Y +PE L + D++S G ++ E++ K ++F + I +W K
Sbjct: 178 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRDYIDQWNK 235
Query: 1021 KQLQKG 1026
Q G
Sbjct: 236 VIEQLG 241
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQ-EASHQDGHV 900
+E + V H+N+ L + L LV + M + NL ++Q E H+
Sbjct: 72 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY 130
Query: 901 LNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXX 960
L + M G+ LH++ ++H D+KP N++ +D + DFGL R
Sbjct: 131 LLYQM--------LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGT 178
Query: 961 XXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
V T Y +PE L + D++S G ++ E++ K ++F + I +W K
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRDYIDQWNK 236
Query: 1021 KQLQKG 1026
Q G
Sbjct: 237 VIEQLG 242
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 31/189 (16%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNL----------GTLLQEAS 894
++EA ++H ++ L Y+ + + +V+++M +L G + EA
Sbjct: 73 LKREASICHMLKHPHIVELLETYS-SDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEA- 130
Query: 895 HQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEA---HLSDFGLD 951
V + MR ++ L + H +N++H D+KP+NVL + + L DFG
Sbjct: 131 -----VASHYMRQIL-----EALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFG-- 178
Query: 952 RLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQ 1011
+ VGT +++PE K DV+ G++L LL+G P T+
Sbjct: 179 -VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK 237
Query: 1012 D---EDIVK 1017
+ E I+K
Sbjct: 238 ERLFEGIIK 246
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A 1-Aryl-3,4-
Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
Length = 364
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQ-EASHQDGHV 900
+E + V H+N+ L + L LV + M + NL ++Q E H+
Sbjct: 72 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY 130
Query: 901 LNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXX 960
L + M G+ LH++ ++H D+KP N++ +D + DFGL R
Sbjct: 131 LLYQM--------LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGT 178
Query: 961 XXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
V T Y +PE L + D++S G ++ E++ K ++F + I +W K
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRDYIDQWNK 236
Query: 1021 KQLQKG 1026
Q G
Sbjct: 237 VIEQLG 242
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment Of
Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment Of
Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQ-EASHQDGHV 900
+E + V H+N+ L + L LV + M + NL ++Q E H+
Sbjct: 73 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY 131
Query: 901 LNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXX 960
L + M G+ LH++ ++H D+KP N++ +D + DFGL R
Sbjct: 132 LLYQM--------LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGT 179
Query: 961 XXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
V T Y +PE L + D++S G ++ E++ K ++F + I +W K
Sbjct: 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRDYIDQWNK 237
Query: 1021 KQLQKG 1026
Q G
Sbjct: 238 VIEQLG 243
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQ-EASHQDGHV 900
+E + V H+N+ L + L LV + M + NL ++Q E H+
Sbjct: 66 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY 124
Query: 901 LNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXX 960
L + M G+ LH++ ++H D+KP N++ +D + DFGL R
Sbjct: 125 LLYQM--------LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGT 172
Query: 961 XXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
V T Y +PE L + D++S G ++ E++ K ++F + I +W K
Sbjct: 173 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRDYIDQWNK 230
Query: 1021 KQLQKG 1026
Q G
Sbjct: 231 VIEQLG 236
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQ-EASHQDGHV 900
+E + V H+N+ L + L LV + M + NL ++Q E H+
Sbjct: 65 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY 123
Query: 901 LNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXX 960
L + M G+ LH++ ++H D+KP N++ +D + DFGL R
Sbjct: 124 LLYQM--------LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGT 171
Query: 961 XXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
V T Y +PE L + D++S G ++ E++ K ++F + I +W K
Sbjct: 172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRDYIDQWNK 229
Query: 1021 KQLQKG 1026
Q G
Sbjct: 230 VIEQLG 235
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 30/217 (13%)
Query: 809 NVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEF--LGKVRHRNLTVLRGY 866
V+ T + L +A Y ++++ L + + L +EF L +V H ++ L G
Sbjct: 38 KVVKATAFHLKGRAGYT---TVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGA 94
Query: 867 YAGAPDLRLLVYDYMPNGNLGTLLQEA-------------------SHQDGHVLNWPMRH 907
+ L LL+ +Y G+L L+E+ H D L M
Sbjct: 95 CSQDGPL-LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT--MGD 151
Query: 908 LI--ALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXX 965
LI A +++G+ +L ++VH D+ +N+L + +SDFGL R
Sbjct: 152 LISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQ 211
Query: 966 XXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +++ E+ T +SDV+SFG++L E++T
Sbjct: 212 GRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ LH++ ++H D+KP N++ +D + DFGL R V T Y +
Sbjct: 143 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRA 198
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
PE L + D++S G ++ E++ K ++F + I +W K
Sbjct: 199 PEVILGMGYKENVDLWSVGCIMGEMVCHK--ILFPGRDYIDQWNK 241
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
VARG+ FL + +H D+ +N+L + + DFGL R + L
Sbjct: 208 VARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL-PLK 266
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQ-DEDIVKWVKKQLQ 1024
+++PE+ + +SDV+S+G++L E+ + G P Q DED +++ ++
Sbjct: 267 WMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMR 320
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+ G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 119 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 173
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 174 LIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 228 LIYEMAAGYPP--FFADQPI 245
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-dependent
Protein Kinase Complexed With A Phosphorylated Substrate
Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase Complexed
With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase Complexed
With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase Complexed
With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase Catalytic
Subunit Alpha In Complex With Peptide Inhibitor Pki Alpha
(6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+ G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+ G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+ G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent
Protein Kinase And Adenosine Further Defines
Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+ G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic
Subunit In Complex With H89 Protein Kinase Inhibitor
N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic
Subunit In Complex With H7 Protein Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic
Subunit In Complex With H8 Protein Kinase Inhibitor
[n-(2-Methylamino)ethyl]-5- Isoquinolinesulfonamide
Length = 350
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+ G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+ G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 105 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 159
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 160 LIDEQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 213
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 214 LIYEMAAGYPP--FFADQPI 231
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLF-----DADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGT 970
GLA LH+ N+VH D+KP N+L +A +SDFGL + GT
Sbjct: 130 GLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGT 189
Query: 971 LGYVSPEAALTGETTKES-----DVYSFGIVLLELLT-GKRP 1006
G+++PE + E KE+ D++S G V +++ G P
Sbjct: 190 EGWIAPE--MLSEDCKENPTYTVDIFSAGCVFYYVISEGSHP 229
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 70/146 (47%), Gaps = 5/146 (3%)
Query: 880 YMPNGNLGTLLQEASHQDGHVLNWPMRHLI--ALGVARGLAFLHTSNMVHGDIKPQNVLF 937
++ +L + +E + +D + + HLI + VA+G+ FL + +H D+ +N+L
Sbjct: 172 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL 231
Query: 938 DADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVL 997
+ DFGL R + L +++PE T +SDV+SFG++L
Sbjct: 232 SEKNVVKICDFGLARDIYKDPDYVRKGDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLL 290
Query: 998 LELLT-GKRPVMFTQ-DEDIVKWVKK 1021
E+ + G P + DE+ + +K+
Sbjct: 291 WEIFSLGASPYPGVKIDEEFCRRLKE 316
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 70/146 (47%), Gaps = 5/146 (3%)
Query: 880 YMPNGNLGTLLQEASHQDGHVLNWPMRHLI--ALGVARGLAFLHTSNMVHGDIKPQNVLF 937
++ +L + +E + +D + + HLI + VA+G+ FL + +H D+ +N+L
Sbjct: 165 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL 224
Query: 938 DADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVL 997
+ DFGL R + L +++PE T +SDV+SFG++L
Sbjct: 225 SEKNVVKICDFGLARDIYKDPDYVRKGDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLL 283
Query: 998 LELLT-GKRPVMFTQ-DEDIVKWVKK 1021
E+ + G P + DE+ + +K+
Sbjct: 284 WEIFSLGASPYPGVKIDEEFCRRLKE 309
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel
Pyrrolopyrimidine Inhibitor
Length = 359
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 70/146 (47%), Gaps = 5/146 (3%)
Query: 880 YMPNGNLGTLLQEASHQDGHVLNWPMRHLI--ALGVARGLAFLHTSNMVHGDIKPQNVLF 937
++ +L + +E + +D + + HLI + VA+G+ FL + +H D+ +N+L
Sbjct: 167 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL 226
Query: 938 DADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVL 997
+ DFGL R + L +++PE T +SDV+SFG++L
Sbjct: 227 SEKNVVKICDFGLARDIYKDPDYVRKGDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLL 285
Query: 998 LELLT-GKRPVMFTQ-DEDIVKWVKK 1021
E+ + G P + DE+ + +K+
Sbjct: 286 WEIFSLGASPYPGVKIDEEFCRRLKE 311
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase
Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase
Catalytic Subunit
Length = 350
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+ G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAK------RVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
Length = 301
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 31/211 (14%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870
+ + RYG V++ + G ++++ S DE + +E E V R+ +L G+ A
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIF--SSRDEKSWFRETELYNTVMLRHENIL-GFIASD 71
Query: 871 PDLR------LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTS- 923
R L+ Y G+L LQ + L I L +A GLA LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR------IVLSIASGLAHLHIEI 125
Query: 924 -------NMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXX-XVGTLGYVS 975
+ H D+K +N+L + + ++D GL + VGT Y++
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 976 PEA------ALTGETTKESDVYSFGIVLLEL 1000
PE ++ K D+++FG+VL E+
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 31/211 (14%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870
+ + RYG V++ + G ++++ S DE + +E E V R+ +L G+ A
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIF--SSRDEKSWFRETELYNTVMLRHENIL-GFIASD 71
Query: 871 PDLR------LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTS- 923
R L+ Y G+L LQ + L I L +A GLA LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR------IVLSIASGLAHLHIEI 125
Query: 924 -------NMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXX-XVGTLGYVS 975
+ H D+K +N+L + + ++D GL + VGT Y++
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 976 PEA------ALTGETTKESDVYSFGIVLLEL 1000
PE ++ K D+++FG+VL E+
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 27/220 (12%)
Query: 807 EENVLSRTRYGLVFKACYN-----DGMVLSIRRLPDGSLDENLFRKEAEFLGKVR-HRNL 860
+E+VL + V + C N + V I + P G + +FR E E L + + HRN+
Sbjct: 17 QEDVLGEGAHARV-QTCINLITSQEYAVKIIEKQP-GHIRSRVFR-EVEMLYQCQGHRNV 73
Query: 861 TVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFL 920
L ++ D LV++ M G++ + + + H N ++ VA L FL
Sbjct: 74 LELIEFFEEE-DRFYLVFEKMRGGSILSHIHKRRH-----FNELEASVVVQDVASALDFL 127
Query: 921 HTSNMVHGDIKPQNVLFDADFE---AHLSDF----GLDRLXXXXXXXXXXXXXXVGTLGY 973
H + H D+KP+N+L + + + DF G+ G+ Y
Sbjct: 128 HNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEY 187
Query: 974 VSPEA--ALTGETT---KESDVYSFGIVLLELLTGKRPVM 1008
++PE A + E + K D++S G++L LL+G P +
Sbjct: 188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFV 227
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 14/166 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMR 906
+E L +++H N+ L Y D+ +L+ + + G L L E ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 907 HLIALGVARGLAFLHTSNMVHGDIKPQNV-LFDADF---EAHLSDFGLDRLXXXXXXXXX 962
++ G+ +LH+ + H D+KP+N+ L D + + DFGL
Sbjct: 122 QIL-----NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL----AHKIDFGN 172
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVM 1008
GT +V+PE E+D++S G++ LL+G P +
Sbjct: 173 EFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 915 RGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
+G+ +LH ++H DIKP N+L D ++DFG+ VGT ++
Sbjct: 148 KGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSN---EFKGSDALLSNTVGTPAFM 204
Query: 975 SPEAALTGE---TTKESDVYSFGIVLLELLTGKRPVMFTQDEDIV 1016
+PE+ + K DV++ G+ L + G+ P M DE I+
Sbjct: 205 APESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM---DERIM 246
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
Length = 400
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 70/173 (40%), Gaps = 11/173 (6%)
Query: 858 RNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGL 917
R + V YAG L L+V + + G L + +Q+ Q I + +
Sbjct: 119 RIVDVYENLYAGRKCL-LIVXECLDGGELFSRIQDRGDQ---AFTEREASEIXKSIGEAI 174
Query: 918 AFLHTSNMVHGDIKPQNVLFDADFE---AHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYV 974
+LH+ N+ H D+KP+N+L+ + L+DFG + T YV
Sbjct: 175 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYV 230
Query: 975 SPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
+PE + K D +S G++ LL G P I K +++ GQ
Sbjct: 231 APEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQ 283
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 85/212 (40%), Gaps = 19/212 (8%)
Query: 225 GNALGGVIPPAIGALPKLQVVSLAQNNLS--GVVPASMFCNVSGYPPSIRVVQLGFNAFT 282
GNA V LP L+ + L++N LS G S F S ++ + L FN
Sbjct: 338 GNAFSEV------DLPSLEFLDLSRNGLSFKGCCSQSDFGTTS-----LKYLDLSFNGVI 386
Query: 283 NVAGPETGSCSSVLQVLDLQQNQIR--GAFPLWLTRASTLTRLDVSGNSISGKIPAQIGG 340
++ G L+ LD Q + ++ F ++L+ L LD+S G
Sbjct: 387 TMSSNFLGL--EQLEHLDFQHSNLKQMSEFSVFLS-LRNLIYLDISHTHTRVAFNGIFNG 443
Query: 341 LWRLEELKMANNSFG-GAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAA 399
L LE LKMA NSF +P + +L+ LDL + P + L+ L +A+
Sbjct: 444 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMAS 503
Query: 400 NLFSGSIPASFRNLPGLENLNLRHNSLSGSLP 431
N F L L+ + L N S P
Sbjct: 504 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 367 SLSLLDLEGN--RFSGEIPEFLGDIRGLKSLTLAANLFSGSIPAS--FRNLPGLENLNLR 422
SL LDL N F G + LK L L+ F+G I S F L LE+L+ +
Sbjct: 348 SLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLS---FNGVITMSSNFLGLEQLEHLDFQ 404
Query: 423 HNSLSGSLPEEV-LGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPAX 481
H++L V L + NL LD+S LS L V ++GN+F
Sbjct: 405 HSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ------ 458
Query: 482 XXXXXXXXXXXXXXQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNL 541
+NF LP L NL + L + +L P F+SL SL+ LN+
Sbjct: 459 --------------ENF---LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 501
Query: 542 SFN 544
+ N
Sbjct: 502 ASN 504
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 34/199 (17%)
Query: 277 GFNAFTNVAGPETGSCSSVLQVLDLQQN--QIRGAFPLWLTRASTLTRLDVSGNSISGKI 334
G NAF+ V P L+ LDL +N +G ++L LD+S N + +
Sbjct: 337 GGNAFSEVDLPS-------LEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TM 388
Query: 335 PAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKS 394
+ GL +LE L +++ +KQ S S+ FL +R L
Sbjct: 389 SSNFLGLEQLEHLDFQHSN--------LKQMSEFSV--------------FLS-LRNLIY 425
Query: 395 LTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGS-LPEEVLGMNNLSTLDLSENKFSGE 453
L ++ + F L LE L + NS + LP+ + NL+ LDLS+ +
Sbjct: 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQL 485
Query: 454 VPASIGNLSQLMVFNLSGN 472
P + +LS L V N++ N
Sbjct: 486 SPTAFNSLSSLQVLNMASN 504
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 67/164 (40%), Gaps = 12/164 (7%)
Query: 101 SFNGTIPATLAQCTLLRAVFLQYNSLSGNLPANIGNLSNLEILNVAANRLS--GEIANDL 158
SF G + T L+ + L +N + + +N L LE L+ + L E + L
Sbjct: 360 SFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFL 418
Query: 159 P-RNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSS 217
RNL Y D+S + LS L+++ + N F E LP +
Sbjct: 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ-------ENFLPDIFTELRN 471
Query: 218 LVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMF 261
L L L + P A +L LQV+++A N L VP +F
Sbjct: 472 LTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKS-VPDGIF 514
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 74/187 (39%), Gaps = 27/187 (14%)
Query: 509 LPNLQVIALQENKLS--GNVPEGFSSLMSLRYLNLSFNGFVGQIPATXXXXXXXXXXXXX 566
LP+L+ + L N LS G + SL+YL+LSFNG +
Sbjct: 346 LPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQH 405
Query: 567 GNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEI 626
N L S+ V SL I DISH +H V + N + +
Sbjct: 406 SN---------LKQMSEFSVFL----SLRNLIYLDISH-THTRV---AFNGIFNGL---- 444
Query: 627 SKCSSLRSLLVNSNHLSGG-IPDSLAKLSNLAVLDLSANNLSGEIPANLSSIFGLMNFNV 685
SSL L + N +PD +L NL LDLS L P +S+ L N+
Sbjct: 445 ---SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 501
Query: 686 SSNNLQA 692
+SN L++
Sbjct: 502 ASNQLKS 508
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 83/205 (40%), Gaps = 16/205 (7%)
Query: 157 DLPRNLKYFDLSSNG--FSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIAN 214
DLP +L++ DLS NG F G S + L+ ++ SFN T+ S
Sbjct: 345 DLP-SLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI---------TMSSNFLG 394
Query: 215 CSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVV 274
L HL Q + L + ++ L + +L ++S F + S+ V+
Sbjct: 395 LEQLEHLDFQHSNLKQMSEFSVF----LSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 450
Query: 275 QLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKI 334
++ N+F P+ + L LDL Q Q+ P S+L L+++ N +
Sbjct: 451 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVP 510
Query: 335 PAQIGGLWRLEELKMANNSFGGAVP 359
L L+++ + N + + P
Sbjct: 511 DGIFDRLTSLQKIWLHTNPWDCSCP 535
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 153 EIANDLPRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAI 212
+I ++LP + K DLS N S + +LQ+++ S R T E ++
Sbjct: 21 KIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLS-----RCEIQTIEDGAYQSL 75
Query: 213 ANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIR 272
++ S+L+ GN + + A L LQ + + NL+ + + G+ +++
Sbjct: 76 SHLSTLI---LTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPI-----GHLKTLK 127
Query: 273 VVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAF 310
+ + N + PE S + L+ LDL N+I+ +
Sbjct: 128 ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY 165
Score = 31.2 bits (69), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 45/109 (41%), Gaps = 19/109 (17%)
Query: 366 SSLSLLDLEGNRFSGEIPEFLGDIRGLKSL----TLAANLFSGSIPASFRNLP-----GL 416
S LS L L GN LG GL SL + NL AS N P L
Sbjct: 76 SHLSTLILTGNPIQSLA---LGAFSGLSSLQKLVAVETNL------ASLENFPIGHLKTL 126
Query: 417 ENLNLRHNSL-SGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQL 464
+ LN+ HN + S LPE + NL LDLS NK + L Q+
Sbjct: 127 KELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ LH++ ++H D+KP N++ +D + DFGL R V T Y +
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMEPEVVTRYYRA 193
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVK 1020
PE L + D++S G ++ E++ K ++F + I +W K
Sbjct: 194 PEVILGMGYKENVDLWSVGCIMGEMVCHK--ILFPGRDYIDQWNK 236
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 26/184 (14%)
Query: 862 VLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIAL--GVARGLAF 919
V+R Y + D L + + N NL L++ + D ++ + I+L +A G+A
Sbjct: 71 VIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 130
Query: 920 LHTSNMVHGDIKPQNVL------FDADFEAH-------LSDFGL-DRLXXXXXXXXXXXX 965
LH+ ++H D+KPQN+L F AD + +SDFGL +L
Sbjct: 131 LHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLN 190
Query: 966 XXVGTLGYVSPE-------AALTGETTKESDVYSFGIVLLELLT-GKRPV--MFTQDEDI 1015
GT G+ +PE T+ D++S G V +L+ GK P ++++ +I
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNI 250
Query: 1016 VKWV 1019
++ +
Sbjct: 251 IRGI 254
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase
Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain Kinase
Loc340156
Length = 373
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 101/232 (43%), Gaps = 19/232 (8%)
Query: 789 FNNKITLAE--TVEATRQFDEENVLSRTRYGLVFKACYND--GMVLSIRRLPD-GSLDEN 843
F+++I A+ V + + +L R+G V K C G+ L+ + + G D+
Sbjct: 73 FDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHK-CEETATGLKLAAKIIKTRGMKDKE 131
Query: 844 LFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNW 903
+ E + ++ H NL L + D+ +LV +Y+ G L + + S+ L
Sbjct: 132 EVKNEISVMNQLDHANLIQLYDAFESKNDI-VLVMEYVDGGELFDRIIDESYN----LTE 186
Query: 904 PMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLF---DADFEAHLSDFGLDRLXXXXXXX 960
L + G+ +H ++H D+KP+N+L DA + + DFGL R
Sbjct: 187 LDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAK-QIKIIDFGLAR----RYKP 241
Query: 961 XXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQD 1012
GT +++PE + +D++S G++ LL+G P + D
Sbjct: 242 REKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND 293
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 94/234 (40%), Gaps = 51/234 (21%)
Query: 318 STLTRLDVSGNSISGKIPAQIGGLWRLEELKMANN--SFGGAVPVEIKQCSSLSLLDLEG 375
S+ TRL++ N + L +L +L +++N SF G +SL LDL
Sbjct: 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS- 86
Query: 376 NRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEV- 434
F+G I T+++N F L LE+L+ +H++L V
Sbjct: 87 --FNGVI-------------TMSSN---------FLGLEQLEHLDFQHSNLKQMSEFSVF 122
Query: 435 LGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPAXXXXXXXXXXXXXX 494
L + NL LD+S LS L V ++GN+F
Sbjct: 123 LSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ------------------- 163
Query: 495 XQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVG 548
+NF LP L NL + L + +L P F+SL SL+ LN+S N F
Sbjct: 164 -ENF---LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS 213
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 13/184 (7%)
Query: 299 LDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAV 358
L+L+ N+++ + + LT+L +S N +S K + LK + SF G +
Sbjct: 33 LELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSD-FGTTSLKYLDLSFNGVI 91
Query: 359 PVE-----IKQCSSLSLLDLEGNRFS--GEIPEFLGDIRGLKSLTLAANLFSGSIPASFR 411
+ ++Q L LD + + E FL +R L L ++ + F
Sbjct: 92 TMSSNFLGLEQ---LEHLDFQHSNLKQMSEFSVFLS-LRNLIYLDISHTHTRVAFNGIFN 147
Query: 412 NLPGLENLNLRHNSLSGS-LPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLS 470
L LE L + NS + LP+ + NL+ LDLS+ + P + +LS L V N+S
Sbjct: 148 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMS 207
Query: 471 GNAF 474
N F
Sbjct: 208 HNNF 211
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 137 LSNLEILNVAANRLSGEIANDL---PRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSF 193
LS+LE+L +A N D+ RNL + DLS PT+ ++LS LQ++N S
Sbjct: 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 208
Query: 194 NKF 196
N F
Sbjct: 209 NNF 211
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 87/224 (38%), Gaps = 19/224 (8%)
Query: 158 LPRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSS 217
+P + +L SN L+QL ++ S N S F+G + +S
Sbjct: 26 IPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLS------FKGCCSQSDFGTTS 79
Query: 218 LVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFC---NVSGYPPSIRVV 274
L +L N + + +G L +L+ + +NL + S+F N+ S
Sbjct: 80 LKYLDLSFNGVITMSSNFLG-LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHT 138
Query: 275 QLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAF-PLWLTRASTLTRLDVSGNSISGK 333
++ FN N S L+VL + N + F P T LT LD+S +
Sbjct: 139 RVAFNGIFNGL--------SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQL 190
Query: 334 IPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNR 377
P L L+ L M++N+F K +SL +LD N
Sbjct: 191 SPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNH 234
Score = 30.0 bits (66), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 69/185 (37%), Gaps = 27/185 (14%)
Query: 509 LPNLQVIALQENKLS--GNVPEGFSSLMSLRYLNLSFNGFVGQIPATXXXXXXXXXXXXX 566
L L ++L N LS G + SL+YL+LSFNG +
Sbjct: 51 LTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQH 110
Query: 567 GNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEI 626
N L S+ V SL I DISH +H V + N + +
Sbjct: 111 SN---------LKQMSEFSVFL----SLRNLIYLDISH-THTRV---AFNGIFNGL---- 149
Query: 627 SKCSSLRSLLVNSNHLSGG-IPDSLAKLSNLAVLDLSANNLSGEIPANLSSIFGLMNFNV 685
SSL L + N +PD +L NL LDLS L P +S+ L N+
Sbjct: 150 ---SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 206
Query: 686 SSNNL 690
S NN
Sbjct: 207 SHNNF 211
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 904 PMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXX 963
P A + +LH+ ++++ D+KP+N+L D ++DFG +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGR 194
Query: 964 XXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDI 1015
GT Y++PE L+ K D ++ G+++ E+ G P F D+ I
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP--FFADQPI 244
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 904 PMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXX 963
P A + +LH+ ++++ D+KP+N+L D ++DFG +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGR 194
Query: 964 XXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDI 1015
GT Y++PE L+ K D ++ G+++ E+ G P F D+ I
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP--FFADQPI 244
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 904 PMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXX 963
P A + +LH+ ++++ D+KP+N+L D ++DFG +
Sbjct: 136 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGR 189
Query: 964 XXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDI 1015
GT Y++PE L+ K D ++ G+++ E+ G P F D+ I
Sbjct: 190 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP--FFADQPI 239
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With A
Peptide Inhibitor And Detergent
Length = 350
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 904 PMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXX 963
P A + +LH+ ++++ D+KP+N+L D ++DFG +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGR 194
Query: 964 XXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDI 1015
GT Y++PE L+ K D ++ G+++ E+ G P F D+ I
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP--FFADQPI 244
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The Inhibited
State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 904 PMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXX 963
P A + +LH+ ++++ D+KP+N+L D ++DFG +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGR 194
Query: 964 XXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDI 1015
GT Y++PE L+ K D ++ G+++ E+ G P F D+ I
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP--FFADQPI 244
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 94/207 (45%), Gaps = 17/207 (8%)
Query: 803 RQFDEENVLSRTRYGLVFKAC-YNDGMVLSIRRLPDGSLDE------NLFRKEAEFLGKV 855
+++++ + L ++ V+KA N +++I+++ G E +E + L ++
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL 69
Query: 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR 915
H N+ L + ++ L V+D+M +L ++++ S VL L +
Sbjct: 70 SHPNIIGLLDAFGHKSNISL-VFDFM-ETDLEVIIKDNSL----VLTPSHIKAYMLMTLQ 123
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
GL +LH ++H D+KP N+L D + L+DFGL + V T Y +
Sbjct: 124 GLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAK---SFGSPNRAYXHQVVTRWYRA 180
Query: 976 PEAALTGETTKES-DVYSFGIVLLELL 1001
PE D+++ G +L ELL
Sbjct: 181 PELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound
Inhibitor Fragment
Length = 293
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 14/166 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMR 906
+E L +++H N+ L Y D+ +L+ + + G L L E ++
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFLAEKESLTEEEATEFLK 120
Query: 907 HLIALGVARGLAFLHTSNMVHGDIKPQNV-LFDADF---EAHLSDFGLDRLXXXXXXXXX 962
++ G+ +LH+ + H D+KP+N+ L D + + DFGL
Sbjct: 121 QIL-----NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL----AHKIDFGN 171
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVM 1008
GT +V+PE E+D++S G++ LL+G P +
Sbjct: 172 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 217
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic Domain
Of Death-Associated Protein Kinase With Atp Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 14/166 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMR 906
+E L +++H N+ L Y D+ +L+ + + G L L E ++
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFLAEKESLTEEEATEFLK 120
Query: 907 HLIALGVARGLAFLHTSNMVHGDIKPQNV-LFDADF---EAHLSDFGLDRLXXXXXXXXX 962
++ G+ +LH+ + H D+KP+N+ L D + + DFGL
Sbjct: 121 QIL-----NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL----AHKIDFGN 171
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVM 1008
GT +V+PE E+D++S G++ LL+G P +
Sbjct: 172 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 217
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 14/166 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMR 906
+E L +++H N+ L Y D+ +L+ + + G L L E ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 907 HLIALGVARGLAFLHTSNMVHGDIKPQNV-LFDADF---EAHLSDFGLDRLXXXXXXXXX 962
++ G+ +LH+ + H D+KP+N+ L D + + DFGL
Sbjct: 122 QIL-----NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL----AHKIDFGN 172
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVM 1008
GT +V+PE E+D++S G++ LL+G P +
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
Length = 285
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 14/166 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMR 906
+E L +++H N+ L Y D+ +L+ + + G L L E ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 907 HLIALGVARGLAFLHTSNMVHGDIKPQNV-LFDADF---EAHLSDFGLDRLXXXXXXXXX 962
++ G+ +LH+ + H D+KP+N+ L D + + DFGL
Sbjct: 122 QIL-----NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL----AHKIDFGN 172
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVM 1008
GT +V+PE E+D++S G++ LL+G P +
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 14/166 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMR 906
+E L +++H N+ L Y D+ +L+ + + G L L E ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 907 HLIALGVARGLAFLHTSNMVHGDIKPQNV-LFDADF---EAHLSDFGLDRLXXXXXXXXX 962
++ G+ +LH+ + H D+KP+N+ L D + + DFGL
Sbjct: 122 QIL-----NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL----AHKIDFGN 172
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVM 1008
GT +V+PE E+D++S G++ LL+G P +
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 14/166 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMR 906
+E L +++H N+ L Y D+ +L+ + + G L L E ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 907 HLIALGVARGLAFLHTSNMVHGDIKPQNV-LFDADF---EAHLSDFGLDRLXXXXXXXXX 962
++ G+ +LH+ + H D+KP+N+ L D + + DFGL
Sbjct: 122 QIL-----NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL----AHKIDFGN 172
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVM 1008
GT +V+PE E+D++S G++ LL+G P +
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 14/166 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMR 906
+E L +++H N+ L Y D+ +L+ + + G L L E ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 907 HLIALGVARGLAFLHTSNMVHGDIKPQNV-LFDADF---EAHLSDFGLDRLXXXXXXXXX 962
++ G+ +LH+ + H D+KP+N+ L D + + DFGL
Sbjct: 122 QIL-----NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL----AHKIDFGN 172
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVM 1008
GT +V+PE E+D++S G++ LL+G P +
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death
Associated Protein Kinase Catalytic Domain With Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death
Associated Protein Kinase Catalytic Domain
Length = 295
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 14/166 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMR 906
+E L +++H N+ L Y D+ +L+ + + G L L E ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 907 HLIALGVARGLAFLHTSNMVHGDIKPQNV-LFDADF---EAHLSDFGLDRLXXXXXXXXX 962
++ G+ +LH+ + H D+KP+N+ L D + + DFGL
Sbjct: 122 QIL-----NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL----AHKIDFGN 172
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVM 1008
GT +V+PE E+D++S G++ LL+G P +
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In
Complex With Amppnp And Mg2+
Length = 295
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 14/166 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMR 906
+E L +++H N+ L Y D+ +L+ + + G L L E ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 907 HLIALGVARGLAFLHTSNMVHGDIKPQNV-LFDADF---EAHLSDFGLDRLXXXXXXXXX 962
++ G+ +LH+ + H D+KP+N+ L D + + DFGL
Sbjct: 122 QIL-----NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL----AHKIDFGN 172
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVM 1008
GT +V+PE E+D++S G++ LL+G P +
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex
With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex
With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex
With Small Molecular Inhibitors
Length = 278
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 14/166 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMR 906
+E L +++H N+ L Y D+ +L+ + + G L L E ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 907 HLIALGVARGLAFLHTSNMVHGDIKPQNV-LFDADF---EAHLSDFGLDRLXXXXXXXXX 962
++ G+ +LH+ + H D+KP+N+ L D + + DFGL
Sbjct: 122 QIL-----NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL----AHKIDFGN 172
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVM 1008
GT +V+PE E+D++S G++ LL+G P +
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Tyrosine- Protein Kinase Mer In Complex With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Tyrosine- Protein Kinase Mer In Complex With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 47.0 bits (110), Expect = 7e-05, Method: Composition-based stats.
Identities = 54/244 (22%), Positives = 101/244 (41%), Gaps = 32/244 (13%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGY-----YAGAPDLRLLVYDYMPNGNLGTLLQEASHQDG- 898
F EA + H N+ L G G P +++ +M G+L T L + + G
Sbjct: 83 FLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPK-PMVILPFMKYGDLHTYLLYSRLETGP 141
Query: 899 -HVLNWPMRHLIA--LGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXX 955
H+ P++ L+ + +A G+ +L N +H D+ +N + D ++DFGL +
Sbjct: 142 KHI---PLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIY 198
Query: 956 XXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDED 1014
+ + +++ E+ T +SDV++FG+ + E+ T G P Q+ +
Sbjct: 199 SGDYYRQGRIAKM-PVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE 257
Query: 1015 IVKWVKKQLQKGQITXXXXXXXXXXXXXXXXWEEFLLGVKVALLCTAPDPIDRPTMSDIV 1074
+ ++ + Q +E ++ C DP+DRPT S +
Sbjct: 258 MYDYLLHGHRLKQ--------------PEDCLDELY---EIMYSCWRTDPLDRPTFSVLR 300
Query: 1075 FMLE 1078
LE
Sbjct: 301 LQLE 304
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 47.0 bits (110), Expect = 7e-05, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 14/166 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMR 906
+E L +++H N+ L Y D+ +L+ + + G L L E ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 907 HLIALGVARGLAFLHTSNMVHGDIKPQNV-LFDADF---EAHLSDFGLDRLXXXXXXXXX 962
++ G+ +LH+ + H D+KP+N+ L D + + DFGL
Sbjct: 122 QIL-----NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL----AHKIDFGN 172
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVM 1008
GT +V+PE E+D++S G++ LL+G P +
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVS 975
G+ LH++ ++H D+KP N++ +D + DFGL R V T Y +
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRA 187
Query: 976 PEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKG 1026
PE L + D++S G ++ E++ K ++F + I +W K Q G
Sbjct: 188 PEVILGMGYKENVDLWSVGCIMGEMVCHK--ILFPGRDYIDQWNKVIEQLG 236
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 70/173 (40%), Gaps = 18/173 (10%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
+R E +L K++ + ++R Y D + + N +L + L++ D W
Sbjct: 101 YRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDP----WE 156
Query: 905 MRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXX 964
R + + +H +VH D+KP N L D L DFG+
Sbjct: 157 -RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIAN-QMQPDTTSVVK 213
Query: 965 XXXVGTLGYVSPEAALTGETTKES-----------DVYSFGIVLLELLTGKRP 1006
VGT+ Y+ PEA +++E+ DV+S G +L + GK P
Sbjct: 214 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 26/184 (14%)
Query: 862 VLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIAL--GVARGLAF 919
V+R Y + D L + + N NL L++ + D ++ + I+L +A G+A
Sbjct: 71 VIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 130
Query: 920 LHTSNMVHGDIKPQNVL------FDADFEAH-------LSDFGL-DRLXXXXXXXXXXXX 965
LH+ ++H D+KPQN+L F AD + +SDFGL +L
Sbjct: 131 LHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 190
Query: 966 XXVGTLGYVSPE-------AALTGETTKESDVYSFGIVLLELLT-GKRPV--MFTQDEDI 1015
GT G+ +PE T+ D++S G V +L+ GK P ++++ +I
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNI 250
Query: 1016 VKWV 1019
++ +
Sbjct: 251 IRGI 254
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 14/166 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMR 906
+E L +++H N+ L Y D+ +L+ + + G L L E ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 907 HLIALGVARGLAFLHTSNMVHGDIKPQNV-LFDADF---EAHLSDFGLDRLXXXXXXXXX 962
++ G+ +LH+ + H D+KP+N+ L D + + DFGL
Sbjct: 122 QIL-----NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL----AHKIDFGN 172
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVM 1008
GT +V+PE E+D++S G++ LL+G P +
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 16/142 (11%)
Query: 876 LVYDYMPNGNLGTLLQEAS--HQDGHVLNWPMRHLIALGVA-RGLAFLHTSNMVHGDIKP 932
+ + + G+LG L++E +D R L LG A GL +LH+ ++HGD+K
Sbjct: 162 IFMELLEGGSLGQLVKEQGCLPED--------RALYYLGQALEGLEYLHSRRILHGDVKA 213
Query: 933 QNVLFDAD-FEAHLSDFGLDRLXXXXXXXXXXXXXXV--GTLGYVSPEAALTGETTKESD 989
NVL +D A L DFG GT +++PE L + D
Sbjct: 214 DNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVD 273
Query: 990 VYSFGIVLLELLTGKRPVMFTQ 1011
V+S ++L +L G P +TQ
Sbjct: 274 VWSSCCMMLHMLNGCHP--WTQ 293
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein
Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein
Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+ G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++PE L+ K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ ++ G P F D+ I
Sbjct: 227 LIYQMAAGYPP--FFADQPI 244
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 103/273 (37%), Gaps = 36/273 (13%)
Query: 328 NSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGN--RFSGEIPEF 385
N G+ P L L+ L +N GG E+ SL LDL N F G +
Sbjct: 313 NCKFGQFPTL--KLKSLKRLTFTSNK-GGNAFSEVD-LPSLEFLDLSRNGLSFKGCCSQS 368
Query: 386 LGDIRGLKSLTLAANLFSGSIPAS--FRNLPGLENLNLRHNSLSGSLPEEV-LGMNNLST 442
LK L L+ F+G I S F L LE+L+ +H++L V L + NL
Sbjct: 369 DFGTTSLKYLDLS---FNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425
Query: 443 LDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPAXXXXXXXXXXXXXXXQNFSGEL 502
LD+S LS L V ++GN+F +NF L
Sbjct: 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ--------------------ENF---L 462
Query: 503 PIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATXXXXXXXXX 562
P L NL + L + +L P F+SL SL+ LN+S N F
Sbjct: 463 PDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 522
Query: 563 XXXXGNHISGSIPPELGNC-SDLEVLELRSNSL 594
NHI S EL + S L L L N
Sbjct: 523 LDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 555
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 34/201 (16%)
Query: 277 GFNAFTNVAGPETGSCSSVLQVLDLQQN--QIRGAFPLWLTRASTLTRLDVSGNSISGKI 334
G NAF+ V P L+ LDL +N +G ++L LD+S N + +
Sbjct: 337 GGNAFSEVDLPS-------LEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TM 388
Query: 335 PAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKS 394
+ GL +LE L +++ +KQ S S+ FL +R L
Sbjct: 389 SSNFLGLEQLEHLDFQHSN--------LKQMSEFSV--------------FLS-LRNLIY 425
Query: 395 LTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGS-LPEEVLGMNNLSTLDLSENKFSGE 453
L ++ + F L LE L + NS + LP+ + NL+ LDLS+ +
Sbjct: 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQL 485
Query: 454 VPASIGNLSQLMVFNLSGNAF 474
P + +LS L V N+S N F
Sbjct: 486 SPTAFNSLSSLQVLNMSHNNF 506
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 137 LSNLEILNVAANRLSGEIANDL---PRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSF 193
LS+LE+L +A N D+ RNL + DLS PT+ ++LS LQ++N S
Sbjct: 444 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 503
Query: 194 NKF 196
N F
Sbjct: 504 NNF 506
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 71/187 (37%), Gaps = 27/187 (14%)
Query: 507 AGLPNLQVIALQENKLS--GNVPEGFSSLMSLRYLNLSFNGFVGQIPATXXXXXXXXXXX 564
LP+L+ + L N LS G + SL+YL+LSFNG +
Sbjct: 344 VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDF 403
Query: 565 XXGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPD 624
N L S+ V SL I DISH +H V + N + +
Sbjct: 404 QHSN---------LKQMSEFSVFL----SLRNLIYLDISH-THTRV---AFNGIFNGL-- 444
Query: 625 EISKCSSLRSLLVNSNHLSGG-IPDSLAKLSNLAVLDLSANNLSGEIPANLSSIFGLMNF 683
SSL L + N +PD +L NL LDLS L P +S+ L
Sbjct: 445 -----SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 499
Query: 684 NVSSNNL 690
N+S NN
Sbjct: 500 NMSHNNF 506
Score = 33.5 bits (75), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 85/227 (37%), Gaps = 48/227 (21%)
Query: 157 DLPRNLKYFDLSSNG--FSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIAN 214
DLP +L++ DLS NG F G S + L+ ++ SFN
Sbjct: 345 DLP-SLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGV------------------ 385
Query: 215 CSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFC---NVSGYPPSI 271
++ N LG L +L+ + +NL + S+F N+ S
Sbjct: 386 ------ITMSSNFLG---------LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISH 430
Query: 272 RVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAF-PLWLTRASTLTRLDVSGNSI 330
++ FN N S L+VL + N + F P T LT LD+S +
Sbjct: 431 THTRVAFNGIFNGL--------SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 482
Query: 331 SGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNR 377
P L L+ L M++N+F K +SL +LD N
Sbjct: 483 EQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNH 529
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 153 EIANDLPRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAI 212
+I ++LP + K DLS N S + +LQ+++ S R T E ++
Sbjct: 21 KIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLS-----RCEIQTIEDGAYQSL 75
Query: 213 ANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIR 272
++ S+L+ GN + + A L LQ + + NL+ + + G+ +++
Sbjct: 76 SHLSTLI---LTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPI-----GHLKTLK 127
Query: 273 VVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAF 310
+ + N + PE S + L+ LDL N+I+ +
Sbjct: 128 ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY 165
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 45/109 (41%), Gaps = 19/109 (17%)
Query: 366 SSLSLLDLEGNRFSGEIPEFLGDIRGLKSL----TLAANLFSGSIPASFRNLP-----GL 416
S LS L L GN LG GL SL + NL AS N P L
Sbjct: 76 SHLSTLILTGNPIQSLA---LGAFSGLSSLQKLVAVETNL------ASLENFPIGHLKTL 126
Query: 417 ENLNLRHNSL-SGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQL 464
+ LN+ HN + S LPE + NL LDLS NK + L Q+
Sbjct: 127 KELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ + + H +VH D+K +N+L DAD ++DFG G+
Sbjct: 120 IVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSN----EFTVGGKLDTFCGSPP 175
Query: 973 YVSPEAALTGETTK--ESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
Y +PE G+ E DV+S G++L L++G P D +K +++++ +G+
Sbjct: 176 YAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGK 227
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase
Domain
Length = 314
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 52/216 (24%), Positives = 95/216 (43%), Gaps = 30/216 (13%)
Query: 810 VLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEF--LGKVRHRNLTVLRGYY 867
V+ T + L +A Y ++++ L + + L +EF L +V H ++ L G
Sbjct: 39 VVKATAFHLKGRAGYT---TVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGAC 95
Query: 868 AGAPDLRLLVYDYMPNGNLGTLLQEA-------------------SHQDGHVLNWPMRHL 908
+ L LL+ +Y G+L L+E+ H D L M L
Sbjct: 96 SQDGPL-LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT--MGDL 152
Query: 909 IALG--VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXX 966
I+ +++G+ +L +VH D+ +N+L + +SDFGL R
Sbjct: 153 ISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQG 212
Query: 967 XVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT 1002
+ + +++ E+ T +SDV+SFG++L E++T
Sbjct: 213 RI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ + + H +VH D+KP+N+L D ++DFGL + G+
Sbjct: 112 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNI----MTDGNFLKTSCGSPN 167
Query: 973 YVSPEAALTGE--TTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQIT 1029
Y +PE ++G+ E DV+S G++L +L + P D++ + + K + G T
Sbjct: 168 YAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPF----DDESIPVLFKNISNGVYT 221
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 14/166 (8%)
Query: 847 KEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMR 906
+E L +++H N+ L Y D+ +L+ + + G L L E ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDV-ILIGELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 907 HLIALGVARGLAFLHTSNMVHGDIKPQNV-LFDADF---EAHLSDFGLDRLXXXXXXXXX 962
++ G+ +LH+ + H D+KP+N+ L D + + DFGL
Sbjct: 122 QIL-----NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL----AHKIDFGN 172
Query: 963 XXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVM 1008
GT +V+PE E+D++S G++ LL+G P +
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ + + H +VH D+KP+N+L D ++DFGL + G+
Sbjct: 122 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNI----MTDGNFLKTSCGSPN 177
Query: 973 YVSPEAALTGE--TTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQIT 1029
Y +PE ++G+ E DV+S G++L +L + P D++ + + K + G T
Sbjct: 178 YAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPF----DDESIPVLFKNISNGVYT 231
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ + + H +VH D+KP+N+L D ++DFGL + G+
Sbjct: 121 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNI----MTDGNFLKTSCGSPN 176
Query: 973 YVSPEAALTGE--TTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQIT 1029
Y +PE ++G+ E DV+S G++L +L + P D++ + + K + G T
Sbjct: 177 YAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPF----DDESIPVLFKNISNGVYT 230
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ + + H +VH D+KP+N+L D ++DFGL + G+
Sbjct: 116 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNI----MTDGNFLKTSCGSPN 171
Query: 973 YVSPEAALTGE--TTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQIT 1029
Y +PE ++G+ E DV+S G++L +L + P D++ + + K + G T
Sbjct: 172 YAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPF----DDESIPVLFKNISNGVYT 225
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 124/300 (41%), Gaps = 43/300 (14%)
Query: 161 NLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSLVH 220
NL+Y +L+ N + P +SNL +L + NK + SA+ N ++L
Sbjct: 67 NLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD----------ISALQNLTNLRE 114
Query: 221 LSAQGNALGGVIPPAIGALPKLQVVSL-AQNNLSGVVPASMFCNVSGYPPSIRVVQLGFN 279
L + + + P + L K ++L A +NLS + P S N +G + V +
Sbjct: 115 LYLNEDNISDISP--LANLTKXYSLNLGANHNLSDLSPLS---NXTGLN-YLTVTESKVK 168
Query: 280 AFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIG 339
T +A + L L L NQI PL ++L N I+ P +
Sbjct: 169 DVTPIANL------TDLYSLSLNYNQIEDISPL--ASLTSLHYFTAYVNQITDITP--VA 218
Query: 340 GLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAA 399
RL LK+ NN P + S L+ L++ N+ S DI +K LT
Sbjct: 219 NXTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQIS--------DINAVKDLTKLK 268
Query: 400 NLFSGSIPAS----FRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVP 455
L GS S NL L +L L +N L E + G+ NL+TL LS+N + P
Sbjct: 269 XLNVGSNQISDISVLNNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHITDIRP 328
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 128/312 (41%), Gaps = 47/312 (15%)
Query: 362 IKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNL 421
I+ ++L L+L GN+ + DI L +L NL+ G+ ++ L+NL
Sbjct: 62 IEYLTNLEYLNLNGNQIT--------DISPLSNLVKLTNLYIGT--NKITDISALQNLT- 110
Query: 422 RHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPAX 481
NL L L+E+ S P + NL++ NL N +
Sbjct: 111 -----------------NLRELYLNEDNISDISP--LANLTKXYSLNLGANHNLSDLSPL 151
Query: 482 XXXXXXXXXXXXXXQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNL 541
+ PI A L +L ++L N++ P +SL SL Y
Sbjct: 152 SNXTGLNYLTVTESK-VKDVTPI--ANLTDLYSLSLNYNQIEDISP--LASLTSLHY--- 203
Query: 542 SFNGFVGQIP-ATXXXXXXXXXXXXXGNHISGSIPPELGNCSDLEVLELRSNSLTG-HIP 599
F +V QI T GN+ + P L N S L LE+ +N ++ +
Sbjct: 204 -FTAYVNQITDITPVANXTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQISDINAV 261
Query: 600 TDISHLSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVL 659
D++ L LNV I++++ ++ S L SL +N+N L + + L+NL L
Sbjct: 262 KDLTKLKXLNVGSNQISDIS-----VLNNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTL 316
Query: 660 DLSANNLSGEIP 671
LS N+++ P
Sbjct: 317 FLSQNHITDIRP 328
Score = 35.0 bits (79), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 121/284 (42%), Gaps = 34/284 (11%)
Query: 121 LQYNSLSGNLPANIGNLSNLEILN---VAANRLSGEIANDLPRNLKYFDLSSNGFSGPIP 177
L+Y +L+GN +I LSNL L + N+++ A NL+ L+ + S P
Sbjct: 68 LEYLNLNGNQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISP 127
Query: 178 TSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAIG 237
++NL++ +N N ++ S ++N + L +L+ + + V P I
Sbjct: 128 --LANLTKXYSLNLGANHNLSDL---------SPLSNXTGLNYLTVTESKVKDVTP--IA 174
Query: 238 ALPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSV-L 296
L L +SL N + + P + ++ F A+ N T + L
Sbjct: 175 NLTDLYSLSLNYNQIEDISPLASLTSLH-----------YFTAYVNQITDITPVANXTRL 223
Query: 297 QVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGG 356
L + N+I P L S LT L++ N IS I A + L +L+ L + +N
Sbjct: 224 NSLKIGNNKITDLSP--LANLSQLTWLEIGTNQIS-DINA-VKDLTKLKXLNVGSNQISD 279
Query: 357 AVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAAN 400
+ V + S L+ L L N+ E E +G + L +L L+ N
Sbjct: 280 -ISV-LNNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQN 321
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik)
Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik)
Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 906 RHLIALGVA-RGLAFLHTSNMVHGDIKPQNVLFDAD-FEAHLSDFG--LDRLXXXXXXXX 961
R L LG A GL +LHT ++HGD+K NVL +D A L DFG L
Sbjct: 167 RALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSL 226
Query: 962 XXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
GT +++PE + + D++S ++L +L G P
Sbjct: 227 LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|3V44|A Chain A, Crystal Structure Of The N-Terminal Fragment Of Zebrafish
Tlr5
Length = 407
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 137/357 (38%), Gaps = 77/357 (21%)
Query: 157 DLPRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPA------TFEGTLPS 210
+LP ++ Y DLS N + TS S L LQ + K ++ P TF G
Sbjct: 27 ELPAHVNYVDLSLNSIAELNETSFSRLQDLQFL-----KVEQQTPGLVIRNNTFRGL--- 78
Query: 211 AIANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVV-------------- 256
SSL+ L N + A L L+V++L Q NL G V
Sbjct: 79 -----SSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEM 133
Query: 257 ------------PASMFCNVSGYPPSIRVVQLGFNAFTNVAGPE----TGSCSSVLQVLD 300
PAS F N+ + V+ L FN ++ + G ++L++
Sbjct: 134 LVLRDNNIKKIQPASFFLNMRRF----HVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189
Query: 301 LQQNQIRGAFPLWLT-----RASTLTRLDVSGN----SISGKIPAQIGGLWRLEELKMAN 351
+ + + W + +++T LD+SGN S++ + I G +++ L ++N
Sbjct: 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGT-KIQSLILSN 248
Query: 352 -----NSFGGA-------VPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAA 399
+SFG + + S + DL ++ + L+ LTLA
Sbjct: 249 SYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQ 308
Query: 400 NLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLG-MNNLSTLDLSENKFSGEVP 455
N + +F L L+ L L N L S+P+ + + +L + L N + P
Sbjct: 309 NEINKIDDNAFWGLTHLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 364
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 12/101 (11%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFG--------LDRLXXXXXX---XX 961
+ L+++H+ ++H D+KP N+ D + DFG LD L
Sbjct: 125 ILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 962 XXXXXXVGTLGYVSPEAAL-TGETTKESDVYSFGIVLLELL 1001
+GT YV+ E TG ++ D+YS GI+ E++
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik)
Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 906 RHLIALGVA-RGLAFLHTSNMVHGDIKPQNVLFDAD-FEAHLSDFG--LDRLXXXXXXXX 961
R L LG A GL +LHT ++HGD+K NVL +D A L DFG L
Sbjct: 151 RALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSL 210
Query: 962 XXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
GT +++PE + + D++S ++L +L G P
Sbjct: 211 LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 168/422 (39%), Gaps = 46/422 (10%)
Query: 294 SVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNS 353
S + VL+L NQ+R P TR S L LD NSIS P L L+ L + +N
Sbjct: 25 SNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNE 84
Query: 354 FGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNL 413
C++L+ LDL N + + L L L+ N S + + L
Sbjct: 85 LSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQL 144
Query: 414 PGLENLNLRHNSLSGSLPEEV--LGMNNLSTLDLSEN---KFSGEVPASIGNLSQLMVFN 468
L+ L L N + EE+ LG ++L LDLS N +FS +IG L L++ N
Sbjct: 145 ENLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNN 204
Query: 469 LSGN-AFSGRIPAXXXXXXXXXXXXXXXQ-------NFSG-------ELPI--------- 504
N + ++ Q FSG +L +
Sbjct: 205 AQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVG 264
Query: 505 --ELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATXXXXXXXXX 562
+ LP+L+ ++L+ N + P F L +LRYL+L F Q +
Sbjct: 265 NGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLK-RAFTKQSVSLASHPNIDDF 323
Query: 563 XXXXGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEI 622
++ E N D + +SN+ TG + + +LS L+ S+ LT E
Sbjct: 324 SFQWLKYL------EYLNMDDNNIPSTKSNTFTGLV--SLKYLS-LSKTFTSLQTLTNET 374
Query: 623 PDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSAN----NLSGEIPANLSSIF 678
++ S L +L + NH+S + + L L +LDL N LSG+ L +IF
Sbjct: 375 FVSLAH-SPLLTLNLTKNHISKIANGTFSWLGQLRILDLGLNEIEQKLSGQEWRGLRNIF 433
Query: 679 GL 680
+
Sbjct: 434 EI 435
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 174/416 (41%), Gaps = 43/416 (10%)
Query: 64 TNNRVTELRLPRLQLSGRISDHLSNLRM--LRKLSLRSNSFNGTIPATLAQCTLLRAVFL 121
+N + L L QL S L+ L +L L N+ + + + LR + L
Sbjct: 220 SNTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSL 279
Query: 122 QYNSLSGNLPANIGNLSNLEILNV--AANRLSGEIA-----NDLP----RNLKYFDLSSN 170
+YN++ P + LSNL L++ A + S +A +D + L+Y ++ N
Sbjct: 280 EYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDN 339
Query: 171 GFSGPIPTSISNLSQLQLINFS--FNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNAL 228
+ + L L+ ++ S F TF ++A+ S L+ L+ N +
Sbjct: 340 NIPSTKSNTFTGLVSLKYLSLSKTFTSLQTLTNETF-----VSLAH-SPLLTLNLTKNHI 393
Query: 229 GGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPE 288
+ L +L+++ L N + + + + I + L +N + ++
Sbjct: 394 SKIANGTFSWLGQLRILDLGLNEIEQKLSGQEWRGLRN----IFEIYLSYNKYLQLSTSS 449
Query: 289 TGSCSSVLQVLDLQQNQIRGA--FPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEE 346
S LQ L L++ ++ P LT LD+S N+I+ + GL LE
Sbjct: 450 FALVPS-LQRLMLRRVALKNVDISPSPFRPLRNLTILDLSNNNIANINEDLLEGLENLEI 508
Query: 347 LKMANNSF---------GGAVPVEIKQCSSLSLLDLEGNRFSGEIPE-FLGDIRGLKSLT 396
L +N+ GG V +K S L +L+LE N EIP ++ LKS+
Sbjct: 509 LDFQHNNLARLWKRANPGGPVNF-LKGLSHLHILNLESNGL-DEIPVGVFKNLFELKSIN 566
Query: 397 LAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLG--MNNLSTLDLSENKF 450
L N + P F + L +LNL+ N L S+ ++V G NL++LD+ N F
Sbjct: 567 LGLNNLNKLEPFIFDDQTSLRSLNLQKN-LITSVEKDVFGPPFQNLNSLDMRFNPF 621
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 132/562 (23%), Positives = 215/562 (38%), Gaps = 68/562 (12%)
Query: 153 EIANDLPRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAI 212
I +DLP N+ +L+ N PT+ + SQL +++ FN S+ P + LP
Sbjct: 18 HIPDDLPSNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQ-ILP--- 73
Query: 213 ANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIR 272
L L+ Q N L + L + L N++ + ++ F N ++
Sbjct: 74 ----LLKVLNLQHNELSQISDQTFVFCTNLTELDLMSNSIHK-IKSNPFKN----QKNLI 124
Query: 273 VVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRG--AFPLWLTRASTLTRLDVSGNSI 330
+ L N ++ TG LQ L L +N+I + L S+L +LD+S N +
Sbjct: 125 KLDLSHNGLSSTKLG-TGVQLENLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPL 183
Query: 331 SGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQC-----SSLSLLDLEGNRFSGEIPEF 385
P + +L L + N + ++ C +S+ L L N+
Sbjct: 184 KEFSPGCFQTIGKLFALLLNNAQLNPHLTEKL--CWELSNTSIQNLSLANNQLLATSEST 241
Query: 386 LGDIR--GLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTL 443
++ L L L+ N SF LP L L+L +N++ P G++NL L
Sbjct: 242 FSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYL 301
Query: 444 DLSENKFSGEVPA----------SIGNLSQLMVFNL--------SGNAFSGRIPAXXXXX 485
L + F+ + + S L L N+ N F+G +
Sbjct: 302 SL-KRAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNIPSTKSNTFTGLV---SLKY 357
Query: 486 XXXXXXXXXXQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNG 545
Q + E + LA P L + L +N +S FS L LR L+L N
Sbjct: 358 LSLSKTFTSLQTLTNETFVSLAHSP-LLTLNLTKNHISKIANGTFSWLGQLRILDLGLNE 416
Query: 546 FVGQIPATXXXXXXXXXXXXXGNHISGSIPPELGNCS-----DLEVLELRSNSLTGH--I 598
++ ++S + +L S L+ L LR +L
Sbjct: 417 IEQKLSGQEWRGLRNIFEI----YLSYNKYLQLSTSSFALVPSLQRLMLRRVALKNVDIS 472
Query: 599 PTDISHLSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLS--------GGIPDSL 650
P+ L +L +LDLS NN+ D + +L L N+L+ GG + L
Sbjct: 473 PSPFRPLRNLTILDLSNNNIANINEDLLEGLENLEILDFQHNNLARLWKRANPGGPVNFL 532
Query: 651 AKLSNLAVLDLSANNLSGEIPA 672
LS+L +L+L +N L EIP
Sbjct: 533 KGLSHLHILNLESNGL-DEIPV 553
Score = 29.6 bits (65), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 102/265 (38%), Gaps = 11/265 (4%)
Query: 439 NLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPAXXXXXXXXXXXXXXXQNF 498
N++ L+L+ N+ P + SQL + + N+ S P
Sbjct: 26 NITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNEL 85
Query: 499 SGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATXXXXX 558
S NL + L N + F + +L L+LS NG T
Sbjct: 86 SQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQLE 145
Query: 559 XXXXXXXXGNHISGSIPPEL---GNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLS- 614
N I EL GN S L L+L SN L P + L L L+
Sbjct: 146 NLQELLLAKNKILALRSEELEFLGN-SSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNN 204
Query: 615 --IN-NLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLA--KLSNLAVLDLSANNLSGE 669
+N +LT ++ E+S +S+++L + +N L + + K +NL LDLS NNL
Sbjct: 205 AQLNPHLTEKLCWELSN-TSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDV 263
Query: 670 IPANLSSIFGLMNFNVSSNNLQAFA 694
+ S + L ++ NN+Q +
Sbjct: 264 GNGSFSYLPSLRYLSLEYNNIQRLS 288
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 149/373 (39%), Gaps = 76/373 (20%)
Query: 66 NRVTELRLPRLQLSGRISDHLSNLRMLRKLSLRSNSFNGTIPATLAQCTLLRAVFLQYNS 125
N +T++ QL+ L NL L + + +N P LA T L + L N
Sbjct: 63 NNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQ 118
Query: 126 LSGNLPANIGNLSNLEILNVAANRLSGEIANDLPRNLKYFDLSSNGFSGPIPTSISNLSQ 185
++ P + NL+NL L +++N +S D+S ++S L+
Sbjct: 119 ITDIDP--LKNLTNLNRLELSSNTIS--------------DIS----------ALSGLTS 152
Query: 186 LQLINFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAIGALPKLQVV 245
LQ +NFS N+ + P +AN ++L L N + + + L L+ +
Sbjct: 153 LQQLNFSSNQVTDLKP----------LANLTTLERLDISSNKVSDI--SVLAKLTNLESL 200
Query: 246 SLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSV--LQVLDLQQ 303
N +S + P + N+ + L N ++ G+ +S+ L LDL
Sbjct: 201 IATNNQISDITPLGILTNLDE-------LSLNGNQLKDI-----GTLASLTNLTDLDLAN 248
Query: 304 NQIRGAFPLW-LTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEI 362
NQI PL LT+ LT L + N IS P + GL L L++ N P I
Sbjct: 249 NQISNLAPLSGLTK---LTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--I 301
Query: 363 KQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLF----SGSIPASFRNLPGLEN 418
+L+ L L N S DI + SLT LF S +S NL +
Sbjct: 302 SNLKNLTYLTLYFNNIS--------DISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINW 353
Query: 419 LNLRHNSLSGSLP 431
L+ HN +S P
Sbjct: 354 LSAGHNQISDLTP 366
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 99/239 (41%), Gaps = 48/239 (20%)
Query: 437 MNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPAXXXXXXXXXXXXXXXQ 496
+NNL+ ++ S N+ + P + NL++L+ ++ N + P
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTL----- 114
Query: 497 NFSGELP-IE-LAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATX 554
F+ ++ I+ L L NL + L N +S S L SL+ LN S N P
Sbjct: 115 -FNNQITDIDPLKNLTNLNRLELSSNTISD--ISALSGLTSLQQLNFSSNQVTDLKP--- 168
Query: 555 XXXXXXXXXXXXGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLD-- 612
L N + LE L++ SN ++ DIS L+ L L+
Sbjct: 169 -----------------------LANLTTLERLDISSNKVS-----DISVLAKLTNLESL 200
Query: 613 LSINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLSGEIP 671
++ NN +I + ++L L +N N L +LA L+NL LDL+ N +S P
Sbjct: 201 IATNNQISDIT-PLGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP 256
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 920 LHTSNMVHGDIKPQNVLFDADFEA---HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSP 976
+H ++VH D+KP+N+L + + L+DFGL GT GY+SP
Sbjct: 146 IHQHDIVHRDLKPENLLLASKCKGAAVKLADFGL---AIEVQGEQQAWFGFAGTPGYLSP 202
Query: 977 EAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKG 1026
E K D+++ G++L LL G P DED K + +Q++ G
Sbjct: 203 EVLRKDPYGKPVDIWACGVILYILLVGYPPFW---DEDQHK-LYQQIKAG 248
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik)
V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 906 RHLIALGVA-RGLAFLHTSNMVHGDIKPQNVLFDAD-FEAHLSDFG--LDRLXXXXXXXX 961
R L LG A GL +LHT ++HGD+K NVL +D A L DFG L
Sbjct: 165 RALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSL 224
Query: 962 XXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
GT +++PE + + D++S ++L +L G P
Sbjct: 225 LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+ G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
+ D ++DFG + GT Y++PE ++ K D ++ G+
Sbjct: 173 IIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ + + H +VH D+K +N+L DAD ++DFG G
Sbjct: 123 IVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSN----EFTVGGKLDAFCGAPP 178
Query: 973 YVSPEAALTGETTK--ESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
Y +PE G+ E DV+S G++L L++G P D +K +++++ +G+
Sbjct: 179 YAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGK 230
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 173/440 (39%), Gaps = 81/440 (18%)
Query: 296 LQVLDLQQNQIRGAF--PLWLTRASTLTRLDVSGNSISGKIPAQIGGLW--RLEELKMAN 351
L LDL +NQIR + P + + ++L +D S N I ++ L L +A
Sbjct: 125 LTRLDLSKNQIRSLYLHPSF-GKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAA 183
Query: 352 NSFGGAVPVEIKQCSS------LSLLDLEGNRFSGEIP-EFLGDIRGLK--SLTLAANLF 402
NS V V+ +C + L +LD+ GN ++ +I F I + SL LA ++
Sbjct: 184 NSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIM 243
Query: 403 SGSIPASFRNLP--------GLENLNLRHNSLSG----SLPEEVL-GMNNLSTLDLSENK 449
F N+ GL ++RH LS SL V + +L L+L+ NK
Sbjct: 244 GAGF--GFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNK 301
Query: 450 FSGEVPASIGNLSQLMVFNLSGNAFSGRIPAXXXXXXXXXXXXXXXQNFSGEL-PIELAG 508
+ + L L V NLS N GEL G
Sbjct: 302 INKIADEAFYGLDNLQVLNLSYNLL-------------------------GELYSSNFYG 336
Query: 509 LPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNG-----FVGQIPATXXXXXXXXXX 563
LP + I LQ+N ++ + F L L+ L+L N F+ IP
Sbjct: 337 LPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDI---------- 386
Query: 564 XXXGNHISGSIPPELGNCSDLEVLELRSNSLTG-HIPTDISHLSHLNVLDLSINNLTGEI 622
GN + P++ ++L + L N L I + + HL +L L+ N +
Sbjct: 387 FLSGNKL--VTLPKINLTANL--IHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCS 442
Query: 623 PDEI-SKCSSLRSLLVNSNHLSGGIP-----DSLAKLSNLAVLDLSANNLSGEIPANLSS 676
D+ S+ SL L + N L D LS+L VL L+ N L+ P S
Sbjct: 443 GDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSH 502
Query: 677 IFGLMNFNVSSNNLQAFANN 696
+ L +++SN L ++N
Sbjct: 503 LTALRGLSLNSNRLTVLSHN 522
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 125/542 (23%), Positives = 197/542 (36%), Gaps = 92/542 (16%)
Query: 150 LSGEIANDLPRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLP 209
+ E +LP NL+ DL S+ P + L L + F S V
Sbjct: 64 IDKEAFRNLP-NLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLK------D 116
Query: 210 SAIANCSSLVHLSAQGNALGGV-IPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSGYP 268
N +L L N + + + P+ G L L+ + + N + V C P
Sbjct: 117 GYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLV------CEHELEP 170
Query: 269 ---PSIRVVQLGFNAFTNVAGPETGSCSS-----VLQVLDLQQN----QIRGAFPLWLTR 316
++ L N+ + + G C + VL++LD+ N I G F +++
Sbjct: 171 LQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISK 230
Query: 317 ASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDL-EG 375
+ + + ++ I G +++ N+F G SS+ LDL G
Sbjct: 231 SQAFSLI------LAHHIMGAGFGFHNIKDPD--QNTFAGLAR------SSVRHLDLSHG 276
Query: 376 NRFS--GEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEE 433
FS + E L D LK L LA N + +F L L+ LNL +N L
Sbjct: 277 FVFSLNSRVFETLKD---LKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSN 333
Query: 434 VLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPAXXXXXXXXXXXXX 493
G+ ++ +DL +N + + L +L +L NA +
Sbjct: 334 FYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALT------------------ 375
Query: 494 XXQNFSGELPIELAGLPNLQVIALQENKLSG----NVPEGFSSLMSLRYLNLSFNGFVGQ 549
+ +P++ I L NKL N+ L R NL F+ +
Sbjct: 376 -----------TIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLR 424
Query: 550 IPATXXXXXXXXXXXXXGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISH----- 604
+P + S P LE L L N L T++
Sbjct: 425 VPHLQILILNQNRFSSCSGDQTPSENPS------LEQLFLGENMLQLAWETELCWDVFEG 478
Query: 605 LSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSAN 664
LSHL VL L+ N L P S ++LR L +NSN L+ + L +NL +LD+S N
Sbjct: 479 LSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRN 536
Query: 665 NL 666
L
Sbjct: 537 QL 538
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 127/309 (41%), Gaps = 54/309 (17%)
Query: 101 SFNGTIPATLAQCTLLRAVFLQYNSLSGNLPANIGNLSNLEILNVAANRLSGEIAND--- 157
S N + TL L+ + L YN ++ L NL++LN++ N L GE+ +
Sbjct: 280 SLNSRVFETLKD---LKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLL-GELYSSNFY 335
Query: 158 -LPRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFN-----KFSREVPATFEG----- 206
LP+ + Y DL N + + L +LQ ++ N F +P F
Sbjct: 336 GLPK-VAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLV 394
Query: 207 TLPSAIANCSSLVHLSAQGNALGGV-IPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVS 265
TLP I ++L+HLS N L + I + +P LQ++ L QN S C+
Sbjct: 395 TLPK-INLTANLIHLSE--NRLENLDILYFLLRVPHLQILILNQNRFSS-------CSGD 444
Query: 266 GYP---PSIRVVQLGFNAFTNVAGPETGSCSSV------LQVLDLQQNQIRGAFPLWLTR 316
P PS+ + LG N ET C V LQVL L N + P +
Sbjct: 445 QTPSENPSLEQLFLGENMLQ--LAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSH 502
Query: 317 ASTLTRLDVSGNSIS----GKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLD 372
+ L L ++ N ++ +PA LE L ++ N P SLS+LD
Sbjct: 503 LTALRGLSLNSNRLTVLSHNDLPAN------LEILDISRNQLLAPNP---DVFVSLSVLD 553
Query: 373 LEGNRFSGE 381
+ N+F E
Sbjct: 554 ITHNKFICE 562
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 29/130 (22%)
Query: 896 QDGHVLNWPM---RHLIALGVARGLAFLHTSNMVHGDIKPQNVLF-DADFE--------- 942
+D + L +P+ RH+ A + + + FLH + + H D+KP+N+LF ++D+E
Sbjct: 127 KDNNYLPYPIHQVRHM-AFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKR 185
Query: 943 ---------AHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSF 993
+ DFG V T Y +PE L ++ DV+S
Sbjct: 186 DERSVKSTAVRVVDFG------SATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSI 239
Query: 994 GIVLLELLTG 1003
G ++ E G
Sbjct: 240 GCIIFEYYVG 249
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 89/234 (38%), Gaps = 32/234 (13%)
Query: 367 SLSLLDLEGN--RFSGEIPEFLGDIRGLKSLTLAANLFSGSIPAS--FRNLPGLENLNLR 422
SL LDL N F G + LK L L+ F+G I S F L LE+L+ +
Sbjct: 372 SLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLS---FNGVITMSSNFLGLEQLEHLDFQ 428
Query: 423 HNSLSGSLPEEV-LGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPAX 481
H++L V L + NL LD+S LS L V ++GN+F
Sbjct: 429 HSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ------ 482
Query: 482 XXXXXXXXXXXXXXQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNL 541
+NF LP L NL + L + +L P F+SL SL+ LN+
Sbjct: 483 --------------ENF---LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 525
Query: 542 SFNGFVGQIPATXXXXXXXXXXXXXGNHISGSIPPELGNC-SDLEVLELRSNSL 594
S N F NHI S EL + S L L L N
Sbjct: 526 SHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 579
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 84/201 (41%), Gaps = 34/201 (16%)
Query: 277 GFNAFTNVAGPETGSCSSVLQVLDLQQN--QIRGAFPLWLTRASTLTRLDVSGNSISGKI 334
G NAF+ V P L+ LDL +N +G +L LD+S N + +
Sbjct: 361 GGNAFSEVDLPS-------LEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TM 412
Query: 335 PAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKS 394
+ GL +LE L +++ +KQ S S+ FL +R L
Sbjct: 413 SSNFLGLEQLEHLDFQHSN--------LKQMSEFSV--------------FLS-LRNLIY 449
Query: 395 LTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGS-LPEEVLGMNNLSTLDLSENKFSGE 453
L ++ + F L LE L + NS + LP+ + NL+ LDLS+ +
Sbjct: 450 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQL 509
Query: 454 VPASIGNLSQLMVFNLSGNAF 474
P + +LS L V N+S N F
Sbjct: 510 SPTAFNSLSSLQVLNMSHNNF 530
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 137 LSNLEILNVAANRLSGEIANDL---PRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSF 193
LS+LE+L +A N D+ RNL + DLS PT+ ++LS LQ++N S
Sbjct: 468 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 527
Query: 194 NKF 196
N F
Sbjct: 528 NNF 530
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 72/187 (38%), Gaps = 27/187 (14%)
Query: 507 AGLPNLQVIALQENKLS--GNVPEGFSSLMSLRYLNLSFNGFVGQIPATXXXXXXXXXXX 564
LP+L+ + L N LS G + +SL+YL+LSFNG +
Sbjct: 368 VDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDF 427
Query: 565 XXGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPD 624
N L S+ V SL I DISH +H V + N + +
Sbjct: 428 QHSN---------LKQMSEFSVFL----SLRNLIYLDISH-THTRV---AFNGIFNGL-- 468
Query: 625 EISKCSSLRSLLVNSNHLSGG-IPDSLAKLSNLAVLDLSANNLSGEIPANLSSIFGLMNF 683
SSL L + N +PD +L NL LDLS L P +S+ L
Sbjct: 469 -----SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 523
Query: 684 NVSSNNL 690
N+S NN
Sbjct: 524 NMSHNNF 530
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 153 EIANDLPRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAI 212
+I ++LP + K DLS N S + +LQ+++ S R T E ++
Sbjct: 45 KIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLS-----RCEIQTIEDGAYQSL 99
Query: 213 ANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIR 272
++ S+L+ GN + + A L LQ + + NL+ + + G+ +++
Sbjct: 100 SHLSTLI---LTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPI-----GHLKTLK 151
Query: 273 VVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAF 310
+ + N + PE S + L+ LDL N+I+ +
Sbjct: 152 ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY 189
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 85/225 (37%), Gaps = 44/225 (19%)
Query: 157 DLPRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCS 216
DLP +L++ DLS NG S S S+ + L + + +F G +
Sbjct: 369 DLP-SLEFLDLSRNGLSFKGCCSQSDFGTISL---------KYLDLSFNGVI-------- 410
Query: 217 SLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFC---NVSGYPPSIRV 273
+ N LG L +L+ + +NL + S+F N+ S
Sbjct: 411 -----TMSSNFLG---------LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTH 456
Query: 274 VQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAF-PLWLTRASTLTRLDVSGNSISG 332
++ FN N S L+VL + N + F P T LT LD+S +
Sbjct: 457 TRVAFNGIFNGL--------SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQ 508
Query: 333 KIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNR 377
P L L+ L M++N+F K +SL +LD N
Sbjct: 509 LSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNH 553
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 45/109 (41%), Gaps = 19/109 (17%)
Query: 366 SSLSLLDLEGNRFSGEIPEFLGDIRGLKSL----TLAANLFSGSIPASFRNLP-----GL 416
S LS L L GN LG GL SL + NL AS N P L
Sbjct: 100 SHLSTLILTGNPIQSLA---LGAFSGLSSLQKLVAVETNL------ASLENFPIGHLKTL 150
Query: 417 ENLNLRHNSL-SGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQL 464
+ LN+ HN + S LPE + NL LDLS NK + L Q+
Sbjct: 151 KELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 199
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 87/224 (38%), Gaps = 38/224 (16%)
Query: 808 ENVLSRTRYGLVF----KACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVL 863
++++ R YG V+ K + + + R+ + +D +E L +++ ++
Sbjct: 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD--YII 88
Query: 864 RGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPM----RHL--IALGVARGL 917
R Y PD LL +D L +L+ A + P+ H+ I + G
Sbjct: 89 RLYDLIIPD-DLLKFD-----ELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGE 142
Query: 918 AFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXX----------------- 960
F+H S ++H D+KP N L + D + DFGL R
Sbjct: 143 NFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNK 202
Query: 961 --XXXXXXXVGTLGYVSPEAALTGET-TKESDVYSFGIVLLELL 1001
V T Y +PE L E TK D++S G + ELL
Sbjct: 203 NLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+ G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT Y++P L+ K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 145/371 (39%), Gaps = 72/371 (19%)
Query: 66 NRVTELRLPRLQLSGRISDHLSNLRMLRKLSLRSNSFNGTIPATLAQCTLLRAVFLQYNS 125
N +T++ QL+ L NL L + + +N P LA T L + L N
Sbjct: 63 NNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQ 118
Query: 126 LSGNLPANIGNLSNLEILNVAANRLSGEIANDLPRNLKYFDLSSNGFSGPIPTSISNLSQ 185
++ P + NL+NL L +++N +S A +L+ SSN + P ++NL+
Sbjct: 119 ITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFSSNQVTDLKP--LANLTT 174
Query: 186 LQLINFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAIGALPKLQVV 245
L+ ++ S NK S S +A ++L L A N + + P +G L L +
Sbjct: 175 LERLDISSNKVSD----------ISVLAKLTNLESLIATNNQISDITP--LGILTNLDEL 222
Query: 246 SLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQ 305
SL N L + + N++ LDL NQ
Sbjct: 223 SLNGNQLKDIGTLASLTNLTD--------------------------------LDLANNQ 250
Query: 306 IRGAFPLW-LTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQ 364
I PL LT+ LT L + N IS P + GL L L++ N P I
Sbjct: 251 ISNLAPLSGLTK---LTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISN 303
Query: 365 CSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLF----SGSIPASFRNLPGLENLN 420
+L+ L L N S DI + SLT LF S +S NL + L+
Sbjct: 304 LKNLTYLTLYFNNIS--------DISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLS 355
Query: 421 LRHNSLSGSLP 431
HN +S P
Sbjct: 356 AGHNQISDLTP 366
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 44/237 (18%)
Query: 437 MNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPAXXXXXXXXXXXXXXXQ 496
+NNL+ ++ S N+ + P + NL++L+ ++ N + P
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP----------------- 102
Query: 497 NFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATXXX 556
LA L NL + L N+++ P +L +L L LS N + I A
Sbjct: 103 ---------LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNT-ISDISA-LSG 149
Query: 557 XXXXXXXXXXGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLD--LS 614
N ++ P L N + LE L++ SN ++ DIS L+ L L+ ++
Sbjct: 150 LTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVS-----DISVLAKLTNLESLIA 202
Query: 615 INNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLSGEIP 671
NN +I + ++L L +N N L +LA L+NL LDL+ N +S P
Sbjct: 203 TNNQISDIT-PLGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP 256
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
Length = 319
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ + + H +VH D+K +N+L DAD ++DFG G+
Sbjct: 115 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN----EFTFGNKLDTFCGSPP 170
Query: 973 YVSPEAALTGETTK--ESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
Y +PE G+ E DV+S G++L L++G P D +K +++++ +G+
Sbjct: 171 YAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGK 222
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ + + H +VH D+K +N+L DAD ++DFG G+
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN----EFTFGNKLDTFCGSPP 177
Query: 973 YVSPEAALTGETTK--ESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
Y +PE G+ E DV+S G++L L++G P D +K +++++ +G+
Sbjct: 178 YAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGK 229
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ + + H +VH D+K +N+L DAD ++DFG G+
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN----EFTFGNKLDTFCGSPP 177
Query: 973 YVSPEAALTGETTK--ESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
Y +PE G+ E DV+S G++L L++G P D +K +++++ +G+
Sbjct: 178 YAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGK 229
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ + + H +VH D+K +N+L DAD ++DFG G+
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN----EFTFGNKLDTFCGSPP 177
Query: 973 YVSPEAALTGETTK--ESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
Y +PE G+ E DV+S G++L L++G P D +K +++++ +G+
Sbjct: 178 YAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGK 229
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 145/371 (39%), Gaps = 72/371 (19%)
Query: 66 NRVTELRLPRLQLSGRISDHLSNLRMLRKLSLRSNSFNGTIPATLAQCTLLRAVFLQYNS 125
N +T++ QL+ L NL L + + +N P LA T L + L N
Sbjct: 63 NNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQ 118
Query: 126 LSGNLPANIGNLSNLEILNVAANRLSGEIANDLPRNLKYFDLSSNGFSGPIPTSISNLSQ 185
++ P + NL+NL L +++N +S A +L+ SSN + P ++NL+
Sbjct: 119 ITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFSSNQVTDLKP--LANLTT 174
Query: 186 LQLINFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAIGALPKLQVV 245
L+ ++ S NK S S +A ++L L A N + + P +G L L +
Sbjct: 175 LERLDISSNKVSD----------ISVLAKLTNLESLIATNNQISDITP--LGILTNLDEL 222
Query: 246 SLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQ 305
SL N L + + N++ LDL NQ
Sbjct: 223 SLNGNQLKDIGTLASLTNLTD--------------------------------LDLANNQ 250
Query: 306 IRGAFPLW-LTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQ 364
I PL LT+ LT L + N IS P + GL L L++ N P I
Sbjct: 251 ISNLAPLSGLTK---LTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISN 303
Query: 365 CSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLF----SGSIPASFRNLPGLENLN 420
+L+ L L N S DI + SLT LF S +S NL + L+
Sbjct: 304 LKNLTYLTLYFNNIS--------DISPVSSLTKLQRLFFSNNKVSDVSSLANLTNINWLS 355
Query: 421 LRHNSLSGSLP 431
HN +S P
Sbjct: 356 AGHNQISDLTP 366
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 44/237 (18%)
Query: 437 MNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPAXXXXXXXXXXXXXXXQ 496
+NNL+ ++ S N+ + P + NL++L+ ++ N + P
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP----------------- 102
Query: 497 NFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATXXX 556
LA L NL + L N+++ P +L +L L LS N + I A
Sbjct: 103 ---------LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNT-ISDISA-LSG 149
Query: 557 XXXXXXXXXXGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLD--LS 614
N ++ P L N + LE L++ SN ++ DIS L+ L L+ ++
Sbjct: 150 LTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVS-----DISVLAKLTNLESLIA 202
Query: 615 INNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLSGEIP 671
NN +I + ++L L +N N L +LA L+NL LDL+ N +S P
Sbjct: 203 TNNQISDIT-PLGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP 256
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 108/264 (40%), Gaps = 28/264 (10%)
Query: 284 VAGPETGSCSSV--LQVLDLQQNQIRGAFPLWL-TRASTLTRLDVSGNSISGKIPAQIGG 340
V+ E G+ +++ L+ L L+ N+++ PL + T S LT+LD+S N I +
Sbjct: 68 VSAVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQD 126
Query: 341 LWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAAN 400
L+ L+ L++ +N +SL L LE + E L + GL L L
Sbjct: 127 LYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHL 186
Query: 401 LFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGN 460
+ SF+ L L+ L + H ++ L NL++L ++ + ++ +
Sbjct: 187 NINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRH 246
Query: 461 LSQLMVFNLSGNAFSGRIPAXXXXXXXXXXXXXXXQNFSGELPIELAGLPNLQVIALQEN 520
L L NLS N S G + EL L +Q++ Q
Sbjct: 247 LVYLRFLNLSYNPIS---------------------TIEGSMLHELLRLQEIQLVGGQ-- 283
Query: 521 KLSGNVPEGFSSLMSLRYLNLSFN 544
L+ P F L LR LN+S N
Sbjct: 284 -LAVVEPYAFRGLNYLRVLNVSGN 306
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 132/343 (38%), Gaps = 50/343 (14%)
Query: 358 VPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLE 417
+P E + LLDL NR + L+ L L N+ S P +F NL L
Sbjct: 30 IPTETR------LLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLR 83
Query: 418 NLNLRHNSLSGSLPEEVL-GMNNLSTLDLSENKFS---GEVPASIGNLSQLMV-----FN 468
L LR N L +P V G++NL+ LD+SENK + + NL L V
Sbjct: 84 TLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY 142
Query: 469 LSGNAFSGRIPAXXXXXXXXXXXXXXXQNFSGELPIE-LAGLPNLQVIALQENKLSGNVP 527
+S AFSG N + +P E L+ L L V+ L+ ++
Sbjct: 143 ISHRAFSG--------LNSLEQLTLEKCNLTS-IPTEALSHLHGLIVLRLRHLNINAIRD 193
Query: 528 EGFSSLMSLRYLNLSFNGFVGQIPATXXXXXXXXXXXXXGNHISGSIPPELGNCSDLEVL 587
F L L+ L +S ++ ++ P +L L
Sbjct: 194 YSFKRLYRLKVLEISHWPYL------------------------DTMTPNCLYGLNLTSL 229
Query: 588 ELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIP 647
+ +LT + HL +L L+LS N ++ + + L+ + + L+ P
Sbjct: 230 SITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEP 289
Query: 648 DSLAKLSNLAVLDLSANNLSGEIPANLSSIFGLMNFNVSSNNL 690
+ L+ L VL++S N L+ + S+ L + SN L
Sbjct: 290 YAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPL 332
Score = 33.5 bits (75), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 2/129 (1%)
Query: 568 NHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDI-SHLSHLNVLDLSINNLTGEIPDEI 626
N +S P N +L L LRSN L IP + + LS+L LD+S N + +
Sbjct: 66 NIVSAVEPGAFNNLFNLRTLGLRSNRLKL-IPLGVFTGLSNLTKLDISENKIVILLDYMF 124
Query: 627 SKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLSGEIPANLSSIFGLMNFNVS 686
+L+SL V N L + + L++L L L NL+ LS + GL+ +
Sbjct: 125 QDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLR 184
Query: 687 SNNLQAFAN 695
N+ A +
Sbjct: 185 HLNINAIRD 193
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 108/291 (37%), Gaps = 24/291 (8%)
Query: 116 LRAVFLQYNSLSGNLPANIGNLSNLEILNVAANRLS----GEIANDLPRNLKYFDLSSNG 171
L + L N +S P NL NL L + +NRL G NL D+S N
Sbjct: 58 LEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTG--LSNLTKLDISENK 115
Query: 172 FSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNALGGV 231
+ +L L+ + N F G +SL L+ + L +
Sbjct: 116 IVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGL--------NSLEQLTLEKCNLTSI 167
Query: 232 IPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGS 291
A+ L L V+ L N++ + S ++V+++ + + P +
Sbjct: 168 PTEALSHLHGLIVLRLRHLNINAIRDYSF-----KRLYRLKVLEISHWPYLDTMTP---N 219
Query: 292 CSSVLQVLDLQQNQIR-GAFPLWLTRASTLTR-LDVSGNSISGKIPAQIGGLWRLEELKM 349
C L + L A P R R L++S N IS + + L RL+E+++
Sbjct: 220 CLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQL 279
Query: 350 ANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAAN 400
P + + L +L++ GN+ + + L++L L +N
Sbjct: 280 VGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN 330
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 17/143 (11%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
LV++ + G++ +Q+ H N + VA L FLHT + H D+KP+N+
Sbjct: 88 LVFEKLQGGSILAHIQKQKH-----FNEREASRVVRDVAAALDFLHTKGIAHRDLKPENI 142
Query: 936 LFDADFE---AHLSDF----GLDRLXXXXXXXXXXXXXXVGTLGYVSPEA--ALTGETT- 985
L ++ + + DF G+ G+ Y++PE T + T
Sbjct: 143 LCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATF 202
Query: 986 --KESDVYSFGIVLLELLTGKRP 1006
K D++S G+VL +L+G P
Sbjct: 203 YDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
Length = 327
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ + + H +VH D+K +N+L DAD ++DFG G+
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN----EFTFGNKLDEFCGSPP 177
Query: 973 YVSPEAALTGETTK--ESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
Y +PE G+ E DV+S G++L L++G P D +K +++++ +G+
Sbjct: 178 YAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGK 229
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 19/204 (9%)
Query: 811 LSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENL-FRKEAEFLGKVRHRNLTVLRGYYA 868
L+ G ++K + + +V+ + ++ D S ++ F +E L H N+ + G
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 869 GAPDLR-LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSN--M 925
P L+ +MP G+L +L E + V++ AL +ARG+AFLHT +
Sbjct: 78 SPPAPHPTLITHWMPYGSLYNVLHEGT---NFVVDQSQAVKFALDMARGMAFLHTLEPLI 134
Query: 926 VHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEA-ALTGET 984
+ ++V+ D D A R+ + +V+PEA E
Sbjct: 135 PRHALNSRSVMIDEDMTA--------RISMADVKFSFQSPGRMYAPAWVAPEALQKKPED 186
Query: 985 T--KESDVYSFGIVLLELLTGKRP 1006
T + +D++SF ++L EL+T + P
Sbjct: 187 TNRRSADMWSFAVLLWELVTREVP 210
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 66/169 (39%), Gaps = 14/169 (8%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
FR+E + L R +T L + L LV +Y G+L TLL + G +
Sbjct: 108 FREERDVLVNGDRRWITQLHFAFQDENYL-YLVMEYYVGGDLLTLLSKF----GERIPAE 162
Query: 905 MRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXX 964
M + + +H VH DIKP N+L D L+DFG
Sbjct: 163 MARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFG--SCLKLRADGTVRS 220
Query: 965 XXXVGTLGYVSPE-------AALTGETTKESDVYSFGIVLLELLTGKRP 1006
VGT Y+SPE TG E D ++ G+ E+ G+ P
Sbjct: 221 LVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 14/134 (10%)
Query: 879 DYMPNGNLGTLLQEAS--HQDGHVLNWPMRHLIALGVA-RGLAFLHTSNMVHGDIKPQNV 935
+ + G+LG L++E +D R L LG A GL +LH+ ++HGD+K NV
Sbjct: 146 ELLEGGSLGQLVKEQGCLPED--------RALYYLGQALEGLEYLHSRRILHGDVKADNV 197
Query: 936 LFDAD-FEAHLSDFGLDRLXXXXXXXXXXXXXXV--GTLGYVSPEAALTGETTKESDVYS 992
L +D A L DFG GT +++PE L + DV+S
Sbjct: 198 LLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWS 257
Query: 993 FGIVLLELLTGKRP 1006
++L +L G P
Sbjct: 258 SCCMMLHMLNGCHP 271
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 18/173 (10%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWP 904
+R E +L K++ + ++R Y D + + N +L + L++ D W
Sbjct: 101 YRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDP----WE 156
Query: 905 MRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXX 964
R + + +H +VH D+KP N L D L DFG+
Sbjct: 157 -RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIAN-QMQPDTTSVVK 213
Query: 965 XXXVGTLGYVSPEAALTGETTKES-----------DVYSFGIVLLELLTGKRP 1006
VG + Y+ PEA +++E+ DV+S G +L + GK P
Sbjct: 214 DSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 27/122 (22%)
Query: 903 WPMRHL--IALGVARGLAFLHTSNMVHGDIKPQNVLF-DADFEA---------------- 943
+P+ H+ +A + L FLH + + H D+KP+N+LF +++FE
Sbjct: 152 YPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNT 211
Query: 944 --HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELL 1001
++DFG V T Y PE L + DV+S G +L E
Sbjct: 212 SIRVADFG------SATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYY 265
Query: 1002 TG 1003
G
Sbjct: 266 RG 267
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ + + H +VH D+K +N+L DAD ++DFG G
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN----EFTFGNKLDAFCGAPP 177
Query: 973 YVSPEAALTGETTK--ESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
Y +PE G+ E DV+S G++L L++G P D +K +++++ +G+
Sbjct: 178 YAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGK 229
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 23/171 (13%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLR-----LLVYDYMPNGNLGTLLQEASHQDGH 899
F++EAE L ++H N ++R Y + ++ +LV + +G L T L+
Sbjct: 72 FKEEAEXLKGLQHPN--IVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIK 129
Query: 900 VLNWPMRHLIALGVARGLAFLHTSN--MVHGDIKPQNVLFDADF-EAHLSDFGLDRLXXX 956
VL R ++ +GL FLHT ++H D+K N+ + D GL L
Sbjct: 130 VLRSWCRQIL-----KGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184
Query: 957 XXXXXXXXXXXVGTLGYVSPEAALTGETTKES-DVYSFGIVLLELLTGKRP 1006
+GT + +PE E ES DVY+FG LE T + P
Sbjct: 185 SFAKAV-----IGTPEFXAPEX--YEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/102 (33%), Positives = 46/102 (45%), Gaps = 11/102 (10%)
Query: 918 AFLHTSNM--VHGDIKPQNVLFDADFEA---HLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
A LH M VH D+KP+N+L + + L+DFGL GT G
Sbjct: 133 AVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGL---AIEVEGEQQAWFGFAGTPG 189
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDED 1014
Y+SPE K D+++ G++L LL G P DED
Sbjct: 190 YLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFW---DED 228
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 14/135 (10%)
Query: 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRH--LIALGVARGLAFLHTSNMVHGDIKP 932
V +Y+ G+L +Q P H + ++ L +LH +++ D+K
Sbjct: 97 FFVIEYVNGGDLMFHMQRQR-------KLPEEHARFYSAEISLALNYLHERGIIYRDLKL 149
Query: 933 QNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKES-DVY 991
NVL D++ L+D+G+ + GT Y++PE L GE S D +
Sbjct: 150 DNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSXFCGTPNYIAPE-ILRGEDYGFSVDWW 205
Query: 992 SFGIVLLELLTGKRP 1006
+ G+++ E++ G+ P
Sbjct: 206 ALGVLMFEMMAGRSP 220
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 13/118 (11%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFE---AHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ +LH + ++H D+KP+NVL + E ++DFG ++ GT
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI----LGETSLMRTLCGTPT 181
Query: 973 YVSPEAAL---TGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
Y++PE + T + D +S G++L L+G P F++ V +K Q+ G+
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP--FSEHRTQVS-LKDQITSGK 236
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 13/118 (11%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFE---AHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ +LH + ++H D+KP+NVL + E ++DFG ++ GT
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI----LGETSLMRTLCGTPT 181
Query: 973 YVSPEAAL---TGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
Y++PE + T + D +S G++L L+G P F++ V +K Q+ G+
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP--FSEHRTQVS-LKDQITSGK 236
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex
With Inhibitor Pv1533
Length = 322
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 13/118 (11%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFE---AHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ +LH + ++H D+KP+NVL + E ++DFG ++ GT
Sbjct: 125 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI----LGETSLMRTLCGTPT 180
Query: 973 YVSPEAAL---TGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
Y++PE + T + D +S G++L L+G P F++ V +K Q+ G+
Sbjct: 181 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP--FSEHRTQVS-LKDQITSGK 235
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And Potentiation
Of Cytotoxic Drugs By Novel Chk2 Inhibitor Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 13/118 (11%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFE---AHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ +LH + ++H D+KP+NVL + E ++DFG ++ GT
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI----LGETSLMRTLCGTPT 181
Query: 973 YVSPEAAL---TGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
Y++PE + T + D +S G++L L+G P F++ V +K Q+ G+
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP--FSEHRTQVS-LKDQITSGK 236
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound To
The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 13/118 (11%)
Query: 916 GLAFLHTSNMVHGDIKPQNVLFDADFE---AHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ +LH + ++H D+KP+NVL + E ++DFG ++ GT
Sbjct: 132 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI----LGETSLMRTLCGTPT 187
Query: 973 YVSPEAAL---TGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
Y++PE + T + D +S G++L L+G P F++ V +K Q+ G+
Sbjct: 188 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP--FSEHRTQVS-LKDQITSGK 242
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 14/135 (10%)
Query: 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRH--LIALGVARGLAFLHTSNMVHGDIKP 932
V +Y+ G+L +Q P H + ++ L +LH +++ D+K
Sbjct: 129 FFVIEYVNGGDLMFHMQRQR-------KLPEEHARFYSAEISLALNYLHERGIIYRDLKL 181
Query: 933 QNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKES-DVY 991
NVL D++ L+D+G+ + GT Y++PE L GE S D +
Sbjct: 182 DNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSTFCGTPNYIAPE-ILRGEDYGFSVDWW 237
Query: 992 SFGIVLLELLTGKRP 1006
+ G+++ E++ G+ P
Sbjct: 238 ALGVLMFEMMAGRSP 252
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935
+V +Y+ G + + L+ + P A + +LH+ ++++ D+KP+N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 936 LFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGI 995
L D ++DFG + GT ++PE L+ K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGV 226
Query: 996 VLLELLTGKRPVMFTQDEDI 1015
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ + + H +VH D+K +N+L D D ++DFG G+
Sbjct: 123 IVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSN----EFTVGNKLDTFCGSPP 178
Query: 973 YVSPEAALTGETTK--ESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
Y +PE G+ E DV+S G++L L++G P D +K +++++ +G+
Sbjct: 179 YAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGK 230
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 846 RKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPM 905
RK+ ++LG + Y +G + + Y +M LG LQ+ S Q+G +
Sbjct: 102 RKQLDYLG--------IPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG---TFKK 150
Query: 906 RHLIALGVAR--GLAFLHTSNMVHGDIKPQNVL--FDADFEAHLSDFGLDRLX----XXX 957
++ LG+ L ++H + VHGDIK N+L + + +L+D+GL
Sbjct: 151 STVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHK 210
Query: 958 XXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006
GT+ + S +A ++ SDV G +L L GK P
Sbjct: 211 QYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLP 259
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 43.9 bits (102), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Query: 913 VARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
+ + + H +VH D+K +N+L DAD ++DFG G
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSN----EFTFGNKLDAFCGAPP 177
Query: 973 YVSPEAALTGETTK--ESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
Y +PE G+ E DV+S G++L L++G P D +K +++++ +G+
Sbjct: 178 YAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGK 229
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 43.9 bits (102), Expect = 5e-04, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Query: 918 AFLHTSNM--VHGDIKPQNVLFDADFEA---HLSDFGLDRLXXXXXXXXXXXXXXVGTLG 972
A LH M VH D+KP+N+L + + L+DFGL GT G
Sbjct: 115 AVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGL---AIEVQGDQQAWFGFAGTPG 171
Query: 973 YVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKG 1026
Y+SPE K D+++ G++L LL G P DED K + +Q++ G
Sbjct: 172 YLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFW---DEDQHK-LYQQIKAG 221
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 14/135 (10%)
Query: 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRH--LIALGVARGLAFLHTSNMVHGDIKP 932
V +Y+ G+L +Q P H + ++ L +LH +++ D+K
Sbjct: 82 FFVIEYVNGGDLMFHMQRQR-------KLPEEHARFYSAEISLALNYLHERGIIYRDLKL 134
Query: 933 QNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKES-DVY 991
NVL D++ L+D+G+ + GT Y++PE L GE S D +
Sbjct: 135 DNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSXFCGTPNYIAPE-ILRGEDYGFSVDWW 190
Query: 992 SFGIVLLELLTGKRP 1006
+ G+++ E++ G+ P
Sbjct: 191 ALGVLMFEMMAGRSP 205
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A
Putative Auto-Inhibition State
Length = 340
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 909 IALGVARGLAFLHTS-NMVHGDIKPQNVLFDADFEAHLSDFGLD-RLXXXXXXXXXXXXX 966
IA+ + + L LH+ +++H D+KP NVL +A + + DFG+ L
Sbjct: 158 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCK 217
Query: 967 XVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP-----VMFTQDEDIVKWVKK 1021
++PE G + K SD++S GI ++EL + P F Q + +V+
Sbjct: 218 PYMAPERINPELNQKGYSVK-SDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP 276
Query: 1022 QL 1023
QL
Sbjct: 277 QL 278
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 921 HTSNMVHGDIKPQNVLFDADFEA---HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPE 977
H + +VH D+KP+N+L + + L+DFGL GT GY+SPE
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGL---AIEVQGDQQAWFGFAGTPGYLSPE 176
Query: 978 AALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDED 1014
K D+++ G++L LL G P DED
Sbjct: 177 VLRKDPYGKPVDMWACGVILYILLVGYPPFW---DED 210
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In
Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16 In
Complex With Staurosporine
Length = 317
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 50/217 (23%), Positives = 84/217 (38%), Gaps = 14/217 (6%)
Query: 825 NDGMVLSIRR-LPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPN 883
+DG +++R L D ++EA+ H N+ L Y + + +P
Sbjct: 52 HDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPF 111
Query: 884 GNLGTLLQEASH--QDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADF 941
GTL E G+ L + LG+ RGL +H H D+KP N+L +
Sbjct: 112 FKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEG 171
Query: 942 EAHLSDFG------LDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGE---TTKESDVYS 992
+ L D G + T+ Y +PE + +DV+S
Sbjct: 172 QPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWS 231
Query: 993 FGIVLLELLTGKRP--VMFTQDEDIVKWVKKQLQKGQ 1027
G VL ++ G+ P ++F + + + V+ QL Q
Sbjct: 232 LGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQ 268
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 14/135 (10%)
Query: 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRH--LIALGVARGLAFLHTSNMVHGDIKP 932
V +Y+ G+L +Q P H + ++ L +LH +++ D+K
Sbjct: 86 FFVIEYVNGGDLMFHMQRQR-------KLPEEHARFYSAEISLALNYLHERGIIYRDLKL 138
Query: 933 QNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKES-DVY 991
NVL D++ L+D+G+ + GT Y++PE L GE S D +
Sbjct: 139 DNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSXFCGTPNYIAPE-ILRGEDYGFSVDWW 194
Query: 992 SFGIVLLELLTGKRP 1006
+ G+++ E++ G+ P
Sbjct: 195 ALGVLMFEMMAGRSP 209
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase
Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 909 IALGVARGLAFLHTS-NMVHGDIKPQNVLFDADFEAHLSDFGLD-RLXXXXXXXXXXXXX 966
IA+ + + L LH+ +++H D+KP NVL +A + + DFG+ L
Sbjct: 114 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCK 173
Query: 967 XVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP-----VMFTQDEDIVKWVKK 1021
++PE G + K SD++S GI ++EL + P F Q + +V+
Sbjct: 174 PYMAPERINPELNQKGYSVK-SDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP 232
Query: 1022 QL 1023
QL
Sbjct: 233 QL 234
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex
With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 45/175 (25%), Positives = 71/175 (40%), Gaps = 22/175 (12%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGN--LGTLLQEASHQDGHVLN 902
+R E +L K++ + ++R Y D +Y M GN L + L++ D
Sbjct: 53 YRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMVMECGNIDLNSWLKKKKSID----P 106
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
W R + + +H +VH D+KP N L D L DFG+
Sbjct: 107 WE-RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIAN-QMQPDTTSV 163
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-----------DVYSFGIVLLELLTGKRP 1006
VGT+ Y+ PEA +++E+ DV+S G +L + GK P
Sbjct: 164 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 218
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 45/175 (25%), Positives = 71/175 (40%), Gaps = 22/175 (12%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGN--LGTLLQEASHQDGHVLN 902
+R E +L K++ + ++R Y D +Y M GN L + L++ D
Sbjct: 57 YRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMVMECGNIDLNSWLKKKKSID----P 110
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
W R + + +H +VH D+KP N L D L DFG+
Sbjct: 111 WE-RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIAN-QMQPDTTSV 167
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-----------DVYSFGIVLLELLTGKRP 1006
VGT+ Y+ PEA +++E+ DV+S G +L + GK P
Sbjct: 168 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 222
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex
With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex
With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex
With A Quinazolin Ligand Compound 4
Length = 342
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 45/175 (25%), Positives = 71/175 (40%), Gaps = 22/175 (12%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGN--LGTLLQEASHQDGHVLN 902
+R E +L K++ + ++R Y D +Y M GN L + L++ D
Sbjct: 101 YRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMVMECGNIDLNSWLKKKKSID----P 154
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
W R + + +H +VH D+KP N L D L DFG+
Sbjct: 155 WE-RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIAN-QMQPDTTSV 211
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-----------DVYSFGIVLLELLTGKRP 1006
VGT+ Y+ PEA +++E+ DV+S G +L + GK P
Sbjct: 212 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 45/175 (25%), Positives = 71/175 (40%), Gaps = 22/175 (12%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGN--LGTLLQEASHQDGHVLN 902
+R E +L K++ + ++R Y D +Y M GN L + L++ D
Sbjct: 54 YRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMVMECGNIDLNSWLKKKKSID----P 107
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
W R + + +H +VH D+KP N L D L DFG+
Sbjct: 108 WE-RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIAN-QMQPDTTSV 164
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-----------DVYSFGIVLLELLTGKRP 1006
VGT+ Y+ PEA +++E+ DV+S G +L + GK P
Sbjct: 165 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 219
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 45/175 (25%), Positives = 71/175 (40%), Gaps = 22/175 (12%)
Query: 845 FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGN--LGTLLQEASHQDGHVLN 902
+R E +L K++ + ++R Y D +Y M GN L + L++ D
Sbjct: 73 YRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMVMECGNIDLNSWLKKKKSID----P 126
Query: 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXX 962
W R + + +H +VH D+KP N L D L DFG+
Sbjct: 127 WE-RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIAN-QMQPDTTSV 183
Query: 963 XXXXXVGTLGYVSPEAALTGETTKES-----------DVYSFGIVLLELLTGKRP 1006
VGT+ Y+ PEA +++E+ DV+S G +L + GK P
Sbjct: 184 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 43.1 bits (100), Expect = 9e-04, Method: Composition-based stats.
Identities = 52/216 (24%), Positives = 88/216 (40%), Gaps = 41/216 (18%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKV--RHRNLTVLRGYYA 868
+ + R+G V++ + G ++++ S +E + +EAE V RH N+
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVMLRHENI-------- 60
Query: 869 GAPDLRLLVYDYMPNGNLGTL-LQEASHQDGHVLNWPMRHLI--------ALGVARGLAF 919
L + D NG L L H+ G + ++ R+ + AL A GLA
Sbjct: 61 ----LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAH 116
Query: 920 LHTS--------NMVHGDIKPQNVLFDADFEAHLSDFGLD-RLXXXXXXXXXXXXXXVGT 970
LH + H D+K +N+L + ++D GL R VGT
Sbjct: 117 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 176
Query: 971 LGYVSPEAALTG------ETTKESDVYSFGIVLLEL 1000
Y++PE E+ K +D+Y+ G+V E+
Sbjct: 177 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf-
Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 43.1 bits (100), Expect = 9e-04, Method: Composition-based stats.
Identities = 52/216 (24%), Positives = 88/216 (40%), Gaps = 41/216 (18%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKV--RHRNLTVLRGYYA 868
+ + R+G V++ + G ++++ S +E + +EAE V RH N+
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVMLRHENI-------- 59
Query: 869 GAPDLRLLVYDYMPNGNLGTL-LQEASHQDGHVLNWPMRHLI--------ALGVARGLAF 919
L + D NG L L H+ G + ++ R+ + AL A GLA
Sbjct: 60 ----LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAH 115
Query: 920 LHTS--------NMVHGDIKPQNVLFDADFEAHLSDFGLD-RLXXXXXXXXXXXXXXVGT 970
LH + H D+K +N+L + ++D GL R VGT
Sbjct: 116 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 175
Query: 971 LGYVSPEAALTG------ETTKESDVYSFGIVLLEL 1000
Y++PE E+ K +D+Y+ G+V E+
Sbjct: 176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 43.1 bits (100), Expect = 9e-04, Method: Composition-based stats.
Identities = 52/216 (24%), Positives = 88/216 (40%), Gaps = 41/216 (18%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKV--RHRNLTVLRGYYA 868
+ + R+G V++ + G ++++ S +E + +EAE V RH N+
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVMLRHENI-------- 85
Query: 869 GAPDLRLLVYDYMPNGNLGTL-LQEASHQDGHVLNWPMRHLI--------ALGVARGLAF 919
L + D NG L L H+ G + ++ R+ + AL A GLA
Sbjct: 86 ----LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAH 141
Query: 920 LHTS--------NMVHGDIKPQNVLFDADFEAHLSDFGLD-RLXXXXXXXXXXXXXXVGT 970
LH + H D+K +N+L + ++D GL R VGT
Sbjct: 142 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 201
Query: 971 LGYVSPEAALTG------ETTKESDVYSFGIVLLEL 1000
Y++PE E+ K +D+Y+ G+V E+
Sbjct: 202 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 43.1 bits (100), Expect = 9e-04, Method: Composition-based stats.
Identities = 52/216 (24%), Positives = 88/216 (40%), Gaps = 41/216 (18%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKV--RHRNLTVLRGYYA 868
+ + R+G V++ + G ++++ S +E + +EAE V RH N+
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVMLRHENI-------- 65
Query: 869 GAPDLRLLVYDYMPNGNLGTL-LQEASHQDGHVLNWPMRHLI--------ALGVARGLAF 919
L + D NG L L H+ G + ++ R+ + AL A GLA
Sbjct: 66 ----LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAH 121
Query: 920 LHTS--------NMVHGDIKPQNVLFDADFEAHLSDFGLD-RLXXXXXXXXXXXXXXVGT 970
LH + H D+K +N+L + ++D GL R VGT
Sbjct: 122 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 181
Query: 971 LGYVSPEAALTG------ETTKESDVYSFGIVLLEL 1000
Y++PE E+ K +D+Y+ G+V E+
Sbjct: 182 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With 4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 43.1 bits (100), Expect = 9e-04, Method: Composition-based stats.
Identities = 52/216 (24%), Positives = 88/216 (40%), Gaps = 41/216 (18%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKV--RHRNLTVLRGYYA 868
+ + R+G V++ + G ++++ S +E + +EAE V RH N+
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVMLRHENI-------- 62
Query: 869 GAPDLRLLVYDYMPNGNLGTL-LQEASHQDGHVLNWPMRHLI--------ALGVARGLAF 919
L + D NG L L H+ G + ++ R+ + AL A GLA
Sbjct: 63 ----LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAH 118
Query: 920 LHTS--------NMVHGDIKPQNVLFDADFEAHLSDFGLD-RLXXXXXXXXXXXXXXVGT 970
LH + H D+K +N+L + ++D GL R VGT
Sbjct: 119 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 178
Query: 971 LGYVSPEAALTG------ETTKESDVYSFGIVLLEL 1000
Y++PE E+ K +D+Y+ G+V E+
Sbjct: 179 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 43.1 bits (100), Expect = 9e-04, Method: Composition-based stats.
Identities = 52/216 (24%), Positives = 88/216 (40%), Gaps = 41/216 (18%)
Query: 811 LSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKV--RHRNLTVLRGYYA 868
+ + R+G V++ + G ++++ S +E + +EAE V RH N+
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVMLRHENI-------- 98
Query: 869 GAPDLRLLVYDYMPNGNLGTL-LQEASHQDGHVLNWPMRHLI--------ALGVARGLAF 919
L + D NG L L H+ G + ++ R+ + AL A GLA
Sbjct: 99 ----LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAH 154
Query: 920 LHTS--------NMVHGDIKPQNVLFDADFEAHLSDFGLD-RLXXXXXXXXXXXXXXVGT 970
LH + H D+K +N+L + ++D GL R VGT
Sbjct: 155 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 214
Query: 971 LGYVSPEAALTG------ETTKESDVYSFGIVLLEL 1000
Y++PE E+ K +D+Y+ G+V E+
Sbjct: 215 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 36/215 (16%)
Query: 829 VLSIRRLPDGSLDENL----FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNG 884
++S R+ GS E E E L K+ H + ++ ++ A D +V + M G
Sbjct: 181 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF-DAEDY-YIVLELMEGG 238
Query: 885 NL------GTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLF- 937
L L+EA+ + L + + +LH + ++H D+KP+NVL
Sbjct: 239 ELFDKVVGNKRLKEATCK-----------LYFYQMLLAVQYLHENGIIHRDLKPENVLLS 287
Query: 938 --DADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL---TGETTKESDVYS 992
+ D ++DFG ++ GT Y++PE + T + D +S
Sbjct: 288 SQEEDCLIKITDFGHSKI----LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWS 343
Query: 993 FGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
G++L L+G P F++ V +K Q+ G+
Sbjct: 344 LGVILFICLSGYPP--FSEHRTQVS-LKDQITSGK 375
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 921 HTSNMVHGDIKPQNVLFDADFE---AHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPE 977
H + +VH D+KP+N+L + + L+DFGL GT GY+SPE
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGL---AIEVQGDQQAWFGFAGTPGYLSPE 176
Query: 978 AALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDED 1014
K D+++ G++L LL G P DED
Sbjct: 177 VLRKDPYGKPVDMWACGVILYILLVGYPPFW---DED 210
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 7/167 (4%)
Query: 294 SVLQVLDLQQN-QIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANN 352
++L+ LDL N Q+R P L L + + P GL L+ L + +N
Sbjct: 79 ALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDN 138
Query: 353 SFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPE--FLGDIRGLKSLTLAANLFSGSIPASF 410
+ + +L+ L L GNR S +PE F G + L L L N + P +F
Sbjct: 139 ALQALPDDTFRDLGNLTHLFLHGNRIS-SVPERAFRG-LHSLDRLLLHQNRVAHVHPHAF 196
Query: 411 RNLPGLENLNLRHNSLSGSLPEEVLG-MNNLSTLDLSENKFSGEVPA 456
R+L L L L N+LS +LP E L + L L L++N + + A
Sbjct: 197 RDLGRLMTLYLFANNLS-ALPTEALAPLRALQYLRLNDNPWVCDCRA 242
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 47/138 (34%)
Query: 503 PIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATXXXXXXXXX 562
P GL L + L L P F L +L+YL L N T
Sbjct: 97 PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTH 156
Query: 563 XXXXGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEI 622
GN IS L+ L L N + P L L L L NNL+
Sbjct: 157 LFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALP 216
Query: 623 PDEISKCSSLRSLLVNSN 640
+ ++ +L+ L +N N
Sbjct: 217 TEALAPLRALQYLRLNDN 234
Score = 30.0 bits (66), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 69/193 (35%), Gaps = 27/193 (13%)
Query: 309 AFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSL 368
A P+ + AS R+ + GN IS A L L + +N + L
Sbjct: 24 AVPVGIPAASQ--RIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALL 81
Query: 369 SLLDLEGN-RFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLS 427
LDL N + P + L +L L P FR L L+ L L+ N+L
Sbjct: 82 EQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ 141
Query: 428 G-----------------------SLPEEVL-GMNNLSTLDLSENKFSGEVPASIGNLSQ 463
S+PE G+++L L L +N+ + P + +L +
Sbjct: 142 ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGR 201
Query: 464 LMVFNLSGNAFSG 476
LM L N S
Sbjct: 202 LMTLYLFANNLSA 214
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 7/167 (4%)
Query: 294 SVLQVLDLQQN-QIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANN 352
++L+ LDL N Q+R P L L + + P GL L+ L + +N
Sbjct: 80 ALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDN 139
Query: 353 SFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPE--FLGDIRGLKSLTLAANLFSGSIPASF 410
+ + +L+ L L GNR S +PE F G + L L L N + P +F
Sbjct: 140 ALQALPDDTFRDLGNLTHLFLHGNRIS-SVPERAFRG-LHSLDRLLLHQNRVAHVHPHAF 197
Query: 411 RNLPGLENLNLRHNSLSGSLPEEVLG-MNNLSTLDLSENKFSGEVPA 456
R+L L L L N+LS +LP E L + L L L++N + + A
Sbjct: 198 RDLGRLMTLYLFANNLS-ALPTEALAPLRALQYLRLNDNPWVCDCRA 243
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 47/138 (34%)
Query: 503 PIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATXXXXXXXXX 562
P GL L + L L P F L +L+YL L N T
Sbjct: 98 PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTH 157
Query: 563 XXXXGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEI 622
GN IS L+ L L N + P L L L L NNL+
Sbjct: 158 LFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALP 217
Query: 623 PDEISKCSSLRSLLVNSN 640
+ ++ +L+ L +N N
Sbjct: 218 TEALAPLRALQYLRLNDN 235
Score = 30.0 bits (66), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 69/193 (35%), Gaps = 27/193 (13%)
Query: 309 AFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSL 368
A P+ + AS R+ + GN IS A L L + +N + L
Sbjct: 25 AVPVGIPAASQ--RIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALL 82
Query: 369 SLLDLEGN-RFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLS 427
LDL N + P + L +L L P FR L L+ L L+ N+L
Sbjct: 83 EQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ 142
Query: 428 G-----------------------SLPEEVL-GMNNLSTLDLSENKFSGEVPASIGNLSQ 463
S+PE G+++L L L +N+ + P + +L +
Sbjct: 143 ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGR 202
Query: 464 LMVFNLSGNAFSG 476
LM L N S
Sbjct: 203 LMTLYLFANNLSA 215
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 36/215 (16%)
Query: 829 VLSIRRLPDGSLDENL----FRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNG 884
++S R+ GS E E E L K+ H + ++ ++ A D +V + M G
Sbjct: 167 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF-DAEDY-YIVLELMEGG 224
Query: 885 NL------GTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLF- 937
L L+EA+ + L + + +LH + ++H D+KP+NVL
Sbjct: 225 ELFDKVVGNKRLKEATCK-----------LYFYQMLLAVQYLHENGIIHRDLKPENVLLS 273
Query: 938 --DADFEAHLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAAL---TGETTKESDVYS 992
+ D ++DFG ++ GT Y++PE + T + D +S
Sbjct: 274 SQEEDCLIKITDFGHSKI----LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWS 329
Query: 993 FGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027
G++L L+G P F++ V +K Q+ G+
Sbjct: 330 LGVILFICLSGYPP--FSEHRTQVS-LKDQITSGK 361
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 14/172 (8%)
Query: 848 EAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRH 907
E L +V H N+ + + +L++ + +L + D + ++ R
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQ 138
Query: 908 LIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLXXXXXXXXXXXXXX 967
L++ + +L +++H DIK +N++ DF L DFG
Sbjct: 139 LVS-----AVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFG----SAAYLERGKLFYTF 189
Query: 968 VGTLGYVSPEAALTGETTK--ESDVYSFGIVLLELLTGKRPVMFTQDEDIVK 1017
GT+ Y +PE L G + E +++S G+ L L+ + P F + E+ V+
Sbjct: 190 CGTIEYCAPE-VLMGNPYRGPELEMWSLGVTLYTLVFEENP--FCELEETVE 238
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 27/122 (22%)
Query: 903 WPMRHL--IALGVARGLAFLHTSNMVHGDIKPQNVLF-DADFEA---------------- 943
+P+ H+ +A + L FLH + + H D+KP+N+LF +++FE
Sbjct: 120 YPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNT 179
Query: 944 --HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELL 1001
++DFG V T Y PE L + DV+S G +L E
Sbjct: 180 SIRVADFG------SATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYY 233
Query: 1002 TG 1003
G
Sbjct: 234 RG 235
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 27/122 (22%)
Query: 903 WPMRHL--IALGVARGLAFLHTSNMVHGDIKPQNVLF-DADFEA---------------- 943
+P+ H+ +A + L FLH + + H D+KP+N+LF +++FE
Sbjct: 129 YPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNT 188
Query: 944 --HLSDFGLDRLXXXXXXXXXXXXXXVGTLGYVSPEAALTGETTKESDVYSFGIVLLELL 1001
++DFG V T Y PE L + DV+S G +L E
Sbjct: 189 SIRVADFG------SATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYY 242
Query: 1002 TG 1003
G
Sbjct: 243 RG 244
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 52/222 (23%), Positives = 85/222 (38%), Gaps = 29/222 (13%)
Query: 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVL 863
F+E VL + +G V KA D +I+++ + E L + H+ V+
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQ--YVV 65
Query: 864 RGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVAR-------- 915
R YYA + R V TL + + + L + + H L R
Sbjct: 66 R-YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTL-YDLIHSENLNQQRDEYWRLFR 123
Query: 916 ----GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFG--------LDRLXXXXXX---X 960
L+++H+ ++H ++KP N+ D + DFG LD L
Sbjct: 124 QILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 961 XXXXXXXVGTLGYVSPEAAL-TGETTKESDVYSFGIVLLELL 1001
+GT YV+ E TG ++ D YS GI+ E +
Sbjct: 184 SDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,381,665
Number of Sequences: 62578
Number of extensions: 1149727
Number of successful extensions: 5501
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 226
Number of HSP's that attempted gapping in prelim test: 2277
Number of HSP's gapped (non-prelim): 1759
length of query: 1099
length of database: 14,973,337
effective HSP length: 109
effective length of query: 990
effective length of database: 8,152,335
effective search space: 8070811650
effective search space used: 8070811650
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)