Query 047739
Match_columns 1099
No_of_seqs 1014 out of 6969
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 04:00:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047739.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047739hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 5.4E-90 1.8E-94 871.0 45.0 669 22-712 9-752 (768)
2 3rgz_A Protein brassinosteroid 100.0 6.1E-73 2.1E-77 715.4 36.1 588 90-692 50-718 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 2E-62 6.9E-67 613.9 48.2 583 56-671 4-626 (680)
4 1ziw_A TOLL-like receptor 3; i 100.0 1.2E-61 4E-66 607.0 48.3 582 69-692 7-623 (680)
5 4eco_A Uncharacterized protein 100.0 6.2E-59 2.1E-63 573.9 25.3 516 25-619 30-600 (636)
6 4ecn_A Leucine-rich repeat pro 100.0 4.5E-58 1.5E-62 573.7 31.4 500 23-617 267-862 (876)
7 3t6q_A CD180 antigen; protein- 100.0 8E-57 2.7E-61 555.6 40.9 522 82-671 27-564 (606)
8 3t6q_A CD180 antigen; protein- 100.0 1.9E-56 6.4E-61 552.2 42.1 530 142-692 16-561 (606)
9 3j0a_A TOLL-like receptor 5; m 100.0 5.5E-56 1.9E-60 566.3 40.5 510 89-670 23-563 (844)
10 3vq2_A TLR4, TOLL-like recepto 100.0 4.1E-56 1.4E-60 549.2 31.6 518 90-671 32-562 (606)
11 3j0a_A TOLL-like receptor 5; m 100.0 3.9E-55 1.3E-59 558.5 37.9 526 56-645 14-562 (844)
12 3vq2_A TLR4, TOLL-like recepto 100.0 3.1E-55 1.1E-59 541.3 32.3 524 117-692 14-559 (606)
13 2z63_A TOLL-like receptor 4, v 100.0 5.4E-50 1.8E-54 491.0 33.4 502 142-691 11-531 (570)
14 4eco_A Uncharacterized protein 100.0 1.2E-50 4.2E-55 499.9 22.9 516 25-643 27-600 (636)
15 2z81_A CD282 antigen, TOLL-lik 100.0 1.3E-49 4.5E-54 485.1 30.7 489 55-623 3-514 (549)
16 4aoj_A High affinity nerve gro 100.0 2.9E-50 9.7E-55 450.3 21.5 265 802-1085 40-322 (329)
17 2z63_A TOLL-like receptor 4, v 100.0 1E-48 3.5E-53 479.7 34.5 463 91-623 29-535 (570)
18 4asz_A BDNF/NT-3 growth factor 100.0 2.3E-50 7.7E-55 444.8 17.4 262 803-1083 13-290 (299)
19 3omv_A RAF proto-oncogene seri 100.0 1.7E-49 6E-54 437.3 24.3 261 802-1083 35-301 (307)
20 4gt4_A Tyrosine-protein kinase 100.0 7.7E-50 2.6E-54 442.6 20.6 259 803-1080 26-304 (308)
21 2z81_A CD282 antigen, TOLL-lik 100.0 3E-49 1E-53 481.9 26.7 481 144-671 11-514 (549)
22 4ecn_A Leucine-rich repeat pro 100.0 9E-49 3.1E-53 489.9 24.1 481 90-667 323-864 (876)
23 4ase_A Vascular endothelial gr 100.0 2.1E-48 7E-53 438.7 18.1 270 794-1081 55-346 (353)
24 4b9d_A Serine/threonine-protei 100.0 2.7E-48 9.3E-53 433.6 18.9 249 803-1075 24-276 (350)
25 2z7x_B TOLL-like receptor 1, v 100.0 1E-47 3.6E-52 464.8 23.0 453 163-671 3-485 (520)
26 2z7x_B TOLL-like receptor 1, v 100.0 3.7E-47 1.3E-51 459.9 26.6 454 69-597 3-483 (520)
27 4fih_A Serine/threonine-protei 100.0 9.2E-48 3.1E-52 428.6 19.5 249 803-1076 74-324 (346)
28 4g3f_A NF-kappa-beta-inducing 100.0 8.7E-48 3E-52 427.6 19.1 254 802-1080 57-314 (336)
29 3hmm_A TGF-beta receptor type- 100.0 7E-48 2.4E-52 428.4 17.4 269 803-1085 3-300 (303)
30 4g8a_A TOLL-like receptor 4; l 100.0 4.9E-46 1.7E-50 462.1 35.9 560 38-691 7-580 (635)
31 4aw0_A HPDK1, 3-phosphoinositi 100.0 5.9E-48 2E-52 423.6 16.1 247 803-1074 32-283 (311)
32 3fpq_A Serine/threonine-protei 100.0 2.3E-47 7.8E-52 417.4 19.7 245 805-1075 28-282 (290)
33 4fie_A Serine/threonine-protei 100.0 1.2E-46 4.3E-51 429.8 21.3 248 803-1075 151-400 (423)
34 3hyh_A Carbon catabolite-derep 100.0 1.3E-46 4.4E-51 407.7 20.1 244 803-1075 13-262 (275)
35 3ubd_A Ribosomal protein S6 ki 100.0 9.3E-47 3.2E-51 414.5 14.3 246 803-1075 24-281 (304)
36 4g8a_A TOLL-like receptor 4; l 100.0 6.5E-44 2.2E-48 443.0 34.5 523 59-644 34-581 (635)
37 4g31_A Eukaryotic translation 100.0 3.3E-45 1.1E-49 404.5 16.9 257 803-1080 5-286 (299)
38 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.2E-44 4.1E-49 441.7 22.8 414 213-671 73-514 (562)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.1E-43 3.7E-48 433.2 27.9 456 68-598 33-513 (562)
40 4b99_A Mitogen-activated prote 100.0 5.4E-43 1.8E-47 401.6 25.9 274 802-1081 53-352 (398)
41 1jl5_A Outer protein YOPM; leu 100.0 7.9E-43 2.7E-47 411.3 28.0 419 82-605 3-439 (454)
42 1ogq_A PGIP-2, polygalacturona 100.0 3.5E-43 1.2E-47 394.6 18.4 220 22-253 3-234 (313)
43 1jl5_A Outer protein YOPM; leu 100.0 2.9E-41 1E-45 397.9 30.4 410 160-676 11-438 (454)
44 4f9c_A Cell division cycle 7-r 100.0 6E-42 2.1E-46 389.0 21.3 202 801-1012 19-252 (361)
45 3v47_A TOLL-like receptor 5B a 100.0 4.6E-41 1.6E-45 399.5 29.2 373 273-672 14-413 (455)
46 3v47_A TOLL-like receptor 5B a 100.0 8.2E-41 2.8E-45 397.3 28.5 383 188-647 14-412 (455)
47 3uto_A Twitchin; kinase, muscl 100.0 7.4E-41 2.5E-45 403.3 22.0 252 802-1076 156-411 (573)
48 3v5w_A G-protein coupled recep 100.0 5.7E-41 2E-45 399.3 19.9 247 803-1075 189-449 (689)
49 3uim_A Brassinosteroid insensi 100.0 1.3E-40 4.3E-45 377.1 20.6 288 791-1086 18-315 (326)
50 2qkw_B Protein kinase; three-h 100.0 3E-40 1E-44 373.1 20.0 280 796-1082 32-315 (321)
51 3p86_A Serine/threonine-protei 100.0 1.6E-40 5.5E-45 372.4 17.4 262 800-1084 34-300 (309)
52 3kul_A Ephrin type-A receptor 100.0 6.1E-40 2.1E-44 370.6 18.9 264 802-1087 48-318 (325)
53 2psq_A Fibroblast growth facto 100.0 2.3E-39 7.9E-44 372.4 23.4 261 802-1081 80-363 (370)
54 4hcu_A Tyrosine-protein kinase 100.0 1.1E-39 3.8E-44 358.5 18.4 257 802-1082 9-266 (269)
55 1qcf_A Haematopoetic cell kina 100.0 1.6E-39 5.4E-44 384.5 21.0 257 801-1081 186-443 (454)
56 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.9E-39 1E-43 354.9 21.6 258 802-1083 7-265 (268)
57 3soc_A Activin receptor type-2 100.0 3.5E-40 1.2E-44 372.4 14.6 266 802-1082 23-318 (322)
58 3bz5_A Internalin-J, INLJ; leu 100.0 2E-38 7E-43 373.9 29.1 364 78-577 30-393 (457)
59 2qol_A Ephrin receptor; recept 100.0 1.6E-39 5.3E-44 374.0 17.9 261 802-1084 44-311 (373)
60 3zgw_A Maternal embryonic leuc 100.0 5.6E-39 1.9E-43 364.2 21.9 250 801-1076 8-261 (347)
61 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3.9E-39 1.3E-43 380.7 21.4 267 802-1098 183-450 (452)
62 3fe3_A MAP/microtubule affinit 100.0 7.4E-39 2.5E-43 361.3 22.5 247 802-1076 14-265 (328)
63 3fxz_A Serine/threonine-protei 100.0 1.1E-38 3.7E-43 355.6 22.4 250 802-1076 19-270 (297)
64 3gen_A Tyrosine-protein kinase 100.0 6.8E-39 2.3E-43 355.1 20.3 256 802-1081 23-279 (283)
65 3bz5_A Internalin-J, INLJ; leu 100.0 9.9E-39 3.4E-43 376.6 22.9 309 296-675 87-395 (457)
66 3vhe_A Vascular endothelial gr 100.0 3E-39 1E-43 371.2 16.6 272 793-1081 12-354 (359)
67 2c30_A Serine/threonine-protei 100.0 3.2E-38 1.1E-42 355.9 24.6 262 790-1076 22-295 (321)
68 2nru_A Interleukin-1 receptor- 100.0 2.7E-38 9.3E-43 354.7 23.8 280 791-1081 13-305 (307)
69 3l9p_A Anaplastic lymphoma kin 100.0 2.5E-39 8.4E-44 371.9 15.3 269 802-1089 70-352 (367)
70 3s95_A LIMK-1, LIM domain kina 100.0 1E-38 3.6E-43 358.6 20.0 259 802-1082 9-282 (310)
71 3lb7_A RAF proto-oncogene seri 100.0 5.1E-38 1.8E-42 351.8 25.1 262 802-1084 35-302 (307)
72 1opk_A P150, C-ABL, proto-onco 100.0 1E-38 3.6E-43 381.0 20.7 259 802-1083 219-479 (495)
73 1tki_A Titin; serine kinase, m 100.0 2E-38 7E-43 357.2 21.6 252 802-1076 4-258 (321)
74 1o6l_A RAC-beta serine/threoni 100.0 6.5E-38 2.2E-42 354.5 25.3 247 802-1075 4-260 (337)
75 3tt0_A Basic fibroblast growth 100.0 2.5E-38 8.5E-43 366.0 22.3 264 802-1084 68-354 (382)
76 1qpc_A LCK kinase; alpha beta 100.0 8E-39 2.7E-43 353.7 17.4 256 802-1081 12-268 (279)
77 4eqm_A Protein kinase; transfe 100.0 3.4E-38 1.2E-42 351.2 22.5 264 802-1086 10-279 (294)
78 3cbl_A C-FES, proto-oncogene t 100.0 5.3E-39 1.8E-43 370.7 16.4 257 802-1081 113-373 (377)
79 1k9a_A Carboxyl-terminal SRC k 100.0 2E-38 6.7E-43 374.5 20.8 253 802-1082 192-445 (450)
80 3poz_A Epidermal growth factor 100.0 1.1E-38 3.9E-43 360.8 17.2 259 802-1084 14-280 (327)
81 3kex_A Receptor tyrosine-prote 100.0 1.3E-38 4.5E-43 360.1 17.8 259 802-1084 12-278 (325)
82 2yab_A Death-associated protei 100.0 5.7E-38 2E-42 358.3 22.9 250 802-1075 11-272 (361)
83 3t9t_A Tyrosine-protein kinase 100.0 1.8E-38 6E-43 348.5 18.0 257 802-1082 7-264 (267)
84 3niz_A Rhodanese family protei 100.0 1.2E-37 4E-42 349.7 25.1 263 802-1075 20-300 (311)
85 3ugc_A Tyrosine-protein kinase 100.0 3.9E-38 1.3E-42 351.2 20.8 264 802-1082 9-291 (295)
86 1o6v_A Internalin A; bacterial 100.0 5E-37 1.7E-41 365.1 31.5 348 294-673 46-393 (466)
87 4euu_A Serine/threonine-protei 100.0 7.7E-38 2.6E-42 353.0 23.0 277 803-1085 9-312 (319)
88 2h8h_A Proto-oncogene tyrosine 100.0 2E-38 6.9E-43 382.1 18.9 255 802-1080 266-521 (535)
89 4aw2_A Serine/threonine-protei 100.0 1.3E-38 4.5E-43 371.6 16.2 260 797-1076 68-339 (437)
90 3uc3_A Serine/threonine-protei 100.0 5.5E-38 1.9E-42 359.6 21.0 253 802-1076 19-275 (361)
91 3op5_A Serine/threonine-protei 100.0 2.6E-38 8.9E-43 363.6 18.2 269 802-1083 34-330 (364)
92 3dtc_A Mitogen-activated prote 100.0 3.5E-38 1.2E-42 347.0 18.4 249 803-1080 7-271 (271)
93 3qup_A Tyrosine-protein kinase 100.0 2.9E-38 1E-42 357.2 18.2 273 801-1091 21-307 (323)
94 1luf_A Muscle-specific tyrosin 100.0 4.1E-38 1.4E-42 359.2 19.5 264 801-1083 45-336 (343)
95 2eva_A TAK1 kinase - TAB1 chim 100.0 7.6E-38 2.6E-42 350.7 20.9 253 802-1082 7-263 (307)
96 3kmu_A ILK, integrin-linked ki 100.0 7.2E-38 2.4E-42 344.4 20.1 253 802-1082 9-270 (271)
97 1mp8_A Focal adhesion kinase 1 100.0 5E-38 1.7E-42 347.7 18.9 255 802-1081 14-275 (281)
98 3lxl_A Tyrosine-protein kinase 100.0 2.4E-38 8.2E-43 358.5 16.7 271 802-1089 22-310 (327)
99 2y0a_A Death-associated protei 100.0 1.8E-37 6.1E-42 350.6 23.5 252 801-1076 9-272 (326)
100 1ob3_A PFPK5, cell division co 100.0 1.6E-37 5.6E-42 344.8 22.5 263 803-1076 2-281 (288)
101 4f0f_A Serine/threonine-protei 100.0 1.3E-37 4.5E-42 345.5 21.7 252 802-1080 18-287 (287)
102 1t46_A HOMO sapiens V-KIT hard 100.0 7.5E-38 2.6E-42 352.1 20.0 262 802-1081 22-306 (313)
103 2zv2_A Calcium/calmodulin-depe 100.0 6E-38 2E-42 350.3 18.8 249 802-1075 12-292 (298)
104 3soa_A Calcium/calmodulin-depe 100.0 1.7E-37 5.8E-42 363.7 23.5 254 800-1076 8-268 (444)
105 3q4u_A Activin receptor type-1 100.0 3.9E-38 1.3E-42 352.4 17.3 263 802-1080 7-300 (301)
106 2ivs_A Proto-oncogene tyrosine 100.0 7.2E-38 2.5E-42 352.5 19.6 261 802-1081 22-310 (314)
107 3kfa_A Tyrosine-protein kinase 100.0 5.7E-38 2E-42 348.6 18.4 258 801-1081 11-270 (288)
108 2bdw_A Hypothetical protein K1 100.0 1.1E-37 3.9E-42 356.9 21.4 253 800-1076 26-285 (362)
109 1u59_A Tyrosine-protein kinase 100.0 5E-38 1.7E-42 348.9 17.7 269 803-1094 9-284 (287)
110 3tki_A Serine/threonine-protei 100.0 4.7E-38 1.6E-42 354.7 17.7 253 802-1076 6-262 (323)
111 2izr_A Casein kinase I isoform 100.0 5E-38 1.7E-42 356.2 17.9 261 802-1082 8-281 (330)
112 3v8s_A RHO-associated protein 100.0 2.9E-38 9.9E-43 365.9 15.8 254 800-1076 66-330 (410)
113 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.7E-38 1.3E-42 358.9 16.4 248 801-1075 21-280 (353)
114 1o6v_A Internalin A; bacterial 100.0 1.7E-36 6E-41 360.5 31.5 350 238-649 44-393 (466)
115 1mqb_A Ephrin type-A receptor 100.0 9.1E-38 3.1E-42 354.3 19.3 262 802-1085 43-312 (333)
116 2jii_A Serine/threonine-protei 100.0 5E-38 1.7E-42 359.6 17.2 280 803-1098 42-352 (352)
117 1xjd_A Protein kinase C, theta 100.0 5.9E-38 2E-42 355.8 17.4 247 801-1074 15-268 (345)
118 1rjb_A FL cytokine receptor; k 100.0 9.2E-38 3.1E-42 356.5 19.1 266 801-1084 43-336 (344)
119 3og7_A AKAP9-BRAF fusion prote 100.0 1.9E-37 6.6E-42 344.4 21.2 260 802-1082 23-288 (289)
120 3ork_A Serine/threonine protei 100.0 1.2E-37 4.2E-42 349.9 19.5 261 802-1082 11-281 (311)
121 2xir_A Vascular endothelial gr 100.0 7.1E-38 2.4E-42 352.9 17.5 270 794-1081 18-309 (316)
122 3g33_A Cell division protein k 100.0 4.9E-37 1.7E-41 344.6 24.1 268 801-1076 7-297 (308)
123 1csn_A Casein kinase-1; phosph 100.0 3E-37 1E-41 344.6 21.8 267 802-1088 9-289 (298)
124 1fot_A TPK1 delta, CAMP-depend 100.0 2.2E-37 7.4E-42 347.7 20.3 244 802-1075 5-258 (318)
125 3c1x_A Hepatocyte growth facto 100.0 7E-38 2.4E-42 359.7 16.5 259 804-1083 90-356 (373)
126 3a62_A Ribosomal protein S6 ki 100.0 2.9E-37 1E-41 349.0 21.3 247 802-1075 16-276 (327)
127 2pvf_A Fibroblast growth facto 100.0 2.4E-37 8.3E-42 351.2 20.6 262 802-1082 34-318 (334)
128 3oz6_A Mitogen-activated prote 100.0 2.3E-37 7.9E-42 359.0 20.8 281 800-1087 6-342 (388)
129 2pmi_A Negative RE, cyclin-dep 100.0 3.2E-37 1.1E-41 347.3 21.3 270 802-1076 4-294 (317)
130 1p4o_A Insulin-like growth fac 100.0 8.5E-38 2.9E-42 353.2 16.5 264 800-1082 22-299 (322)
131 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.8E-37 6E-42 353.2 19.0 244 802-1075 40-293 (350)
132 4fvq_A Tyrosine-protein kinase 100.0 2.2E-37 7.4E-42 344.1 19.1 254 802-1085 7-278 (289)
133 2i0e_A Protein kinase C-beta I 100.0 3.2E-37 1.1E-41 350.9 20.7 248 801-1075 18-276 (353)
134 3c0i_A Peripheral plasma membr 100.0 6.4E-37 2.2E-41 349.7 23.1 254 802-1075 23-286 (351)
135 2w4o_A Calcium/calmodulin-depe 100.0 3.3E-37 1.1E-41 351.6 20.6 251 801-1076 51-306 (349)
136 2ozo_A Tyrosine-protein kinase 100.0 2.4E-37 8.4E-42 377.8 20.8 255 804-1081 336-597 (613)
137 2vd5_A DMPK protein; serine/th 100.0 9.4E-38 3.2E-42 361.8 16.3 258 797-1075 55-327 (412)
138 1kob_A Twitchin; kinase, intra 100.0 5.4E-37 1.8E-41 353.4 22.3 252 802-1076 50-305 (387)
139 1byg_A CSK, protein (C-termina 100.0 1.4E-37 4.7E-42 343.6 16.6 253 802-1082 20-273 (278)
140 3cc6_A Protein tyrosine kinase 100.0 3.2E-37 1.1E-41 341.2 19.5 255 802-1081 11-272 (281)
141 4dc2_A Protein kinase C IOTA t 100.0 5.5E-37 1.9E-41 353.1 22.1 246 802-1070 51-307 (396)
142 3uzp_A CKI-delta, CKID, casein 100.0 4.9E-37 1.7E-41 342.5 21.0 274 802-1094 8-292 (296)
143 2x4f_A Myosin light chain kina 100.0 6E-37 2E-41 352.3 22.2 248 805-1075 91-342 (373)
144 4fr4_A YANK1, serine/threonine 100.0 5.2E-37 1.8E-41 352.2 21.7 249 802-1075 14-271 (384)
145 3qd2_B Eukaryotic translation 100.0 5.1E-37 1.8E-41 348.4 21.4 254 802-1076 5-326 (332)
146 2v62_A Serine/threonine-protei 100.0 2.2E-37 7.6E-42 353.0 18.5 267 802-1082 36-328 (345)
147 1xbb_A Tyrosine-protein kinase 100.0 1.1E-37 3.7E-42 346.9 15.4 255 802-1080 15-277 (291)
148 3f66_A Hepatocyte growth facto 100.0 2.7E-37 9.3E-42 345.0 18.6 259 803-1082 25-291 (298)
149 4e5w_A Tyrosine-protein kinase 100.0 4E-37 1.4E-41 344.3 19.8 262 802-1080 20-300 (302)
150 3lzb_A Epidermal growth factor 100.0 2.7E-37 9.3E-42 349.3 18.5 259 802-1084 14-280 (327)
151 3ttj_A Mitogen-activated prote 100.0 6.8E-37 2.3E-41 361.7 22.5 263 802-1076 61-356 (464)
152 3lxp_A Non-receptor tyrosine-p 100.0 4.3E-37 1.5E-41 346.5 19.8 259 804-1081 32-309 (318)
153 2h34_A Serine/threonine-protei 100.0 4E-37 1.4E-41 345.2 19.5 266 801-1089 32-303 (309)
154 3mdy_A Bone morphogenetic prot 100.0 9.7E-37 3.3E-41 346.9 22.4 273 798-1086 32-335 (337)
155 1u5q_A Serine/threonine protei 100.0 4.7E-37 1.6E-41 349.8 19.8 247 802-1077 53-307 (348)
156 2id5_A Lingo-1, leucine rich r 100.0 2E-36 6.7E-41 361.7 26.1 321 296-643 13-333 (477)
157 2id5_A Lingo-1, leucine rich r 100.0 2.3E-36 7.8E-41 361.1 26.4 321 271-595 13-333 (477)
158 1cm8_A Phosphorylated MAP kina 100.0 2.3E-36 7.8E-41 347.0 25.4 266 802-1085 24-319 (367)
159 3h4j_B AMPK kdaid, SNF1-like p 100.0 5.3E-37 1.8E-41 346.6 19.5 245 803-1076 9-259 (336)
160 1u46_A ACK-1, activated CDC42 100.0 1.5E-37 5.2E-42 345.7 14.8 261 802-1084 17-286 (291)
161 3pls_A Macrophage-stimulating 100.0 5.6E-37 1.9E-41 342.4 19.3 259 804-1083 22-288 (298)
162 4hgt_A Casein kinase I isoform 100.0 5.7E-37 2E-41 341.9 19.2 269 800-1087 6-285 (296)
163 3a8x_A Protein kinase C IOTA t 100.0 1E-36 3.5E-41 346.4 21.5 251 802-1075 8-275 (345)
164 3llt_A Serine/threonine kinase 100.0 1.3E-36 4.5E-41 349.2 22.5 265 800-1075 32-355 (360)
165 3brb_A Proto-oncogene tyrosine 100.0 9.6E-37 3.3E-41 343.1 20.7 264 800-1081 31-307 (313)
166 3is5_A Calcium-dependent prote 100.0 1.5E-36 5E-41 336.5 21.6 252 802-1075 21-278 (285)
167 2wqm_A Serine/threonine-protei 100.0 8.8E-37 3E-41 342.9 20.0 268 802-1088 31-303 (310)
168 2a19_B Interferon-induced, dou 100.0 6.5E-37 2.2E-41 339.3 18.7 255 801-1087 9-279 (284)
169 4fl3_A Tyrosine-protein kinase 100.0 3.4E-37 1.2E-41 377.3 18.1 248 809-1080 375-629 (635)
170 2i1m_A Macrophage colony-stimu 100.0 2.9E-37 9.8E-42 350.6 16.2 262 802-1081 45-325 (333)
171 3o0g_A Cell division protein k 100.0 7.5E-37 2.6E-41 340.2 19.2 265 803-1076 2-283 (292)
172 3p1a_A MYT1 kinase, membrane-a 100.0 7.8E-37 2.7E-41 343.2 19.4 245 802-1076 56-305 (311)
173 2y94_A 5'-AMP-activated protei 100.0 7.4E-37 2.5E-41 360.4 20.1 249 803-1079 16-272 (476)
174 2a2a_A Death-associated protei 100.0 2E-36 6.9E-41 341.6 22.8 252 801-1076 10-273 (321)
175 4eut_A Serine/threonine-protei 100.0 3.9E-37 1.3E-41 357.6 17.3 275 803-1083 9-310 (396)
176 2r5t_A Serine/threonine-protei 100.0 4.6E-37 1.6E-41 352.1 17.6 244 802-1072 37-286 (373)
177 4ejn_A RAC-alpha serine/threon 100.0 9E-37 3.1E-41 360.5 20.6 247 802-1075 147-404 (446)
178 3fdn_A Serine/threonine-protei 100.0 8.3E-37 2.8E-41 337.5 19.0 246 802-1076 8-258 (279)
179 3kk8_A Calcium/calmodulin depe 100.0 1.4E-36 4.7E-41 336.7 20.7 251 802-1076 5-262 (284)
180 2eue_A Carbon catabolite derep 100.0 8.3E-37 2.8E-41 336.7 18.8 244 803-1075 13-262 (275)
181 3f3z_A Calcium/calmodulin-depe 100.0 1.6E-36 5.4E-41 334.9 21.0 250 801-1075 7-261 (277)
182 2yfx_A Tyrosine-protein kinase 100.0 3.5E-37 1.2E-41 348.9 15.8 267 802-1087 29-309 (327)
183 3hko_A Calcium/calmodulin-depe 100.0 6.8E-37 2.3E-41 349.4 18.2 263 798-1075 21-330 (345)
184 3gni_B Strad alpha; kinase fol 100.0 7.5E-37 2.6E-41 354.9 18.6 210 802-1015 24-245 (389)
185 3dbq_A Dual specificity protei 100.0 7.2E-37 2.4E-41 348.5 17.9 251 802-1076 8-274 (343)
186 2w5a_A Serine/threonine-protei 100.0 3.6E-37 1.2E-41 340.4 14.5 261 802-1083 5-275 (279)
187 2y4i_B KSR2, HKSR2, kinase sup 100.0 4.2E-37 1.4E-41 347.0 15.0 272 802-1097 32-317 (319)
188 4agu_A Cyclin-dependent kinase 100.0 3.9E-36 1.3E-40 337.8 22.8 264 803-1076 3-285 (311)
189 3mtl_A Cell division protein k 100.0 1.6E-36 5.3E-41 342.8 19.6 269 803-1080 2-288 (324)
190 2y7j_A Phosphorylase B kinase 100.0 5.8E-36 2E-40 343.6 24.6 255 797-1075 88-359 (365)
191 1nxk_A MAP kinase-activated pr 100.0 1.2E-36 4.2E-41 353.1 19.0 254 802-1076 60-322 (400)
192 2acx_A G protein-coupled recep 100.0 1.6E-36 5.3E-41 361.8 20.1 252 802-1075 183-444 (576)
193 3g2f_A Bone morphogenetic prot 100.0 5.7E-37 2E-41 348.7 15.6 268 802-1084 12-320 (336)
194 3bhy_A Death-associated protei 100.0 4.6E-36 1.6E-40 332.3 22.4 256 802-1081 4-273 (283)
195 2zmd_A Dual specificity protei 100.0 1.4E-36 4.8E-41 351.6 19.1 250 803-1076 56-321 (390)
196 3qyz_A Mitogen-activated prote 100.0 2.7E-36 9.2E-41 346.8 20.7 268 802-1076 26-314 (364)
197 1ua2_A CAK, cell division prot 100.0 4.7E-36 1.6E-40 342.2 22.5 267 801-1076 8-292 (346)
198 3rp9_A Mitogen-activated prote 100.0 1E-35 3.6E-40 353.0 26.3 195 802-1002 52-279 (458)
199 1t4h_A Serine/threonine-protei 100.0 3E-36 1E-40 335.0 20.0 248 803-1076 26-283 (290)
200 3kvw_A DYRK2, dual specificity 100.0 5.2E-36 1.8E-40 351.2 23.0 264 802-1076 96-409 (429)
201 2vgo_A Serine/threonine-protei 100.0 4.3E-36 1.5E-40 332.7 21.0 250 802-1080 13-269 (284)
202 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.5E-36 5E-41 349.2 17.9 254 802-1081 64-338 (365)
203 2w1i_A JAK2; chromosomal rearr 100.0 2.3E-36 7.8E-41 342.0 18.8 263 802-1081 40-321 (326)
204 1fvr_A Tyrosine-protein kinase 100.0 1.4E-36 4.8E-41 343.9 16.9 260 802-1083 24-301 (327)
205 3mi9_A Cell division protein k 100.0 1.5E-35 5.1E-40 339.1 25.6 268 802-1076 16-312 (351)
206 2x7f_A TRAF2 and NCK-interacti 100.0 2.3E-36 7.7E-41 342.2 18.5 254 800-1075 21-286 (326)
207 2ac3_A MAP kinase-interacting 100.0 6.5E-36 2.2E-40 336.8 22.2 258 803-1076 12-296 (316)
208 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.2E-36 7.6E-41 342.3 18.5 266 800-1075 31-318 (329)
209 3dls_A PAS domain-containing s 100.0 3.3E-36 1.1E-40 341.2 19.6 242 801-1076 22-275 (335)
210 3rgf_A Cyclin-dependent kinase 100.0 5.5E-36 1.9E-40 349.3 22.0 271 802-1076 19-334 (405)
211 3eb0_A Putative uncharacterize 100.0 3.3E-36 1.1E-40 348.4 19.9 267 800-1075 4-321 (383)
212 3sv0_A Casein kinase I-like; t 100.0 5.4E-36 1.9E-40 353.7 21.9 261 802-1081 6-277 (483)
213 1b6c_B TGF-B superfamily recep 100.0 5.6E-36 1.9E-40 341.4 21.2 272 797-1084 36-338 (342)
214 3i6u_A CDS1, serine/threonine- 100.0 2.1E-36 7E-41 353.7 18.0 252 800-1076 132-400 (419)
215 3gxj_A TGF-beta receptor type- 100.0 5.5E-38 1.9E-42 351.5 4.3 268 802-1085 2-300 (303)
216 2buj_A Serine/threonine-protei 100.0 8.9E-37 3E-41 344.1 14.1 264 802-1083 28-307 (317)
217 3mwu_A Calmodulin-domain prote 100.0 8.7E-36 3E-40 356.1 23.3 251 801-1076 20-277 (486)
218 3cok_A Serine/threonine-protei 100.0 1.4E-36 4.9E-41 335.5 15.3 249 802-1076 10-263 (278)
219 3nsz_A CK II alpha, casein kin 100.0 6.6E-36 2.3E-40 339.0 21.2 260 802-1075 35-319 (330)
220 3kn6_A Ribosomal protein S6 ki 100.0 2.1E-36 7.3E-41 341.4 17.0 247 808-1076 16-271 (325)
221 2wtk_C Serine/threonine-protei 100.0 1.2E-35 4E-40 332.9 22.9 256 802-1080 4-270 (305)
222 3n9x_A Phosphotransferase; mal 100.0 1.7E-35 6E-40 347.5 25.3 200 802-1007 25-252 (432)
223 2owb_A Serine/threonine-protei 100.0 2.9E-36 1E-40 342.3 18.1 247 802-1075 40-291 (335)
224 2qr7_A Ribosomal protein S6 ki 100.0 3.4E-36 1.2E-40 341.6 18.5 252 801-1075 20-277 (342)
225 2fst_X Mitogen-activated prote 100.0 6.5E-36 2.2E-40 342.8 20.8 260 802-1076 28-312 (367)
226 3pg1_A Mitogen-activated prote 100.0 3.1E-36 1.1E-40 346.4 18.2 272 794-1076 13-317 (362)
227 4e7w_A Glycogen synthase kinas 100.0 6.7E-36 2.3E-40 346.6 21.2 269 802-1081 39-329 (394)
228 3c4z_A Rhodopsin kinase; Ser/T 100.0 3E-36 1E-40 358.9 18.6 254 803-1075 185-448 (543)
229 2jam_A Calcium/calmodulin-depe 100.0 5.8E-36 2E-40 335.1 19.9 250 801-1075 7-261 (304)
230 2rku_A Serine/threonine-protei 100.0 4.4E-36 1.5E-40 334.5 18.8 248 802-1076 14-266 (294)
231 1vzo_A Ribosomal protein S6 ki 100.0 2.2E-36 7.6E-41 345.8 16.8 254 802-1077 53-323 (355)
232 1j1b_A Glycogen synthase kinas 100.0 6.6E-36 2.3E-40 349.5 21.0 269 803-1080 54-343 (420)
233 3byv_A Rhoptry kinase; malaria 100.0 1E-37 3.5E-42 360.3 5.6 244 802-1075 72-359 (377)
234 3o6n_A APL1; leucine-rich repe 100.0 2.6E-35 9E-40 342.1 25.9 346 44-427 3-352 (390)
235 2r3i_A Cell division protein k 100.0 1.1E-35 3.7E-40 332.2 21.7 263 803-1075 3-283 (299)
236 2xrw_A Mitogen-activated prote 100.0 1.1E-35 3.9E-40 342.3 22.4 263 802-1076 24-319 (371)
237 3eqc_A Dual specificity mitoge 100.0 5.6E-36 1.9E-40 343.9 19.5 203 802-1015 32-238 (360)
238 3nyv_A Calmodulin-domain prote 100.0 4.6E-36 1.6E-40 358.7 19.5 250 801-1075 24-281 (484)
239 3lij_A Calcium/calmodulin depe 100.0 1.3E-35 4.3E-40 355.2 23.1 250 801-1075 35-291 (494)
240 1blx_A Cyclin-dependent kinase 100.0 2.7E-35 9.1E-40 333.4 24.5 267 801-1080 9-303 (326)
241 3q5i_A Protein kinase; CDPK, m 100.0 1.3E-35 4.3E-40 356.2 23.1 251 801-1076 34-302 (504)
242 2yex_A Serine/threonine-protei 100.0 5.5E-36 1.9E-40 330.3 18.1 253 801-1076 5-262 (276)
243 4aaa_A Cyclin-dependent kinase 100.0 9.1E-36 3.1E-40 337.8 20.1 265 802-1075 24-306 (331)
244 2h6d_A 5'-AMP-activated protei 100.0 5.8E-36 2E-40 330.2 18.0 246 803-1076 11-262 (276)
245 3a7i_A MST3 kinase, serine/thr 100.0 1.2E-35 4.3E-40 332.3 20.8 248 802-1076 21-271 (303)
246 2j0j_A Focal adhesion kinase 1 100.0 9.4E-36 3.2E-40 365.9 21.0 256 801-1081 388-650 (656)
247 2i6l_A Mitogen-activated prote 100.0 1.8E-35 6E-40 333.8 21.6 269 802-1080 10-312 (320)
248 3ll6_A Cyclin G-associated kin 100.0 3.3E-36 1.1E-40 342.5 15.7 262 802-1086 27-312 (337)
249 2vwi_A Serine/threonine-protei 100.0 3.1E-36 1.1E-40 337.2 15.1 267 801-1076 13-288 (303)
250 3lm5_A Serine/threonine-protei 100.0 1.4E-35 4.7E-40 335.6 20.5 256 799-1076 24-288 (327)
251 2ycf_A Serine/threonine-protei 100.0 1.2E-35 4.1E-40 335.5 19.3 250 801-1075 8-274 (322)
252 3e3p_A Protein kinase, putativ 100.0 3.1E-35 1E-39 337.9 23.0 279 796-1080 16-321 (360)
253 3pfq_A PKC-B, PKC-beta, protei 100.0 8.6E-36 2.9E-40 367.4 19.5 248 801-1075 339-597 (674)
254 3com_A Serine/threonine-protei 100.0 3.1E-35 1.1E-39 330.9 22.4 251 801-1075 27-278 (314)
255 3fme_A Dual specificity mitoge 100.0 6.7E-36 2.3E-40 332.2 16.6 252 802-1075 6-266 (290)
256 2b9h_A MAP kinase FUS3, mitoge 100.0 5.9E-35 2E-39 334.5 23.7 270 802-1080 10-312 (353)
257 1phk_A Phosphorylase kinase; g 100.0 2.9E-35 9.9E-40 328.5 20.6 250 802-1075 16-283 (298)
258 3q60_A ROP5B; pseudokinase, tr 100.0 1.2E-36 4E-41 350.8 9.5 254 802-1075 61-352 (371)
259 2clq_A Mitogen-activated prote 100.0 2.5E-35 8.5E-40 328.5 19.8 252 804-1076 23-279 (295)
260 2vx3_A Dual specificity tyrosi 100.0 5.5E-35 1.9E-39 338.1 23.1 263 802-1075 53-372 (382)
261 1z57_A Dual specificity protei 100.0 4.8E-35 1.6E-39 333.1 22.1 264 802-1076 13-329 (339)
262 2j7t_A Serine/threonine-protei 100.0 1.9E-35 6.5E-40 330.7 18.1 252 801-1075 17-275 (302)
263 3oja_B Anopheles plasmodium-re 100.0 1E-34 3.5E-39 355.9 26.3 347 42-452 7-359 (597)
264 1x8b_A WEE1HU, WEE1-like prote 100.0 1.7E-35 5.9E-40 328.5 17.5 247 801-1076 9-280 (289)
265 1wak_A Serine/threonine-protei 100.0 3.2E-35 1.1E-39 342.6 20.4 264 802-1075 36-391 (397)
266 3an0_A Dual specificity mitoge 100.0 1.2E-35 4.2E-40 338.2 16.6 252 802-1075 50-310 (340)
267 4exu_A Mitogen-activated prote 100.0 6.8E-35 2.3E-39 335.8 21.8 259 802-1076 41-324 (371)
268 3coi_A Mitogen-activated prote 100.0 1.8E-34 6E-39 330.4 24.8 256 802-1076 23-306 (353)
269 1zy4_A Serine/threonine-protei 100.0 4E-35 1.4E-39 328.1 19.0 256 801-1076 4-284 (303)
270 2wei_A Calmodulin-domain prote 100.0 6.2E-35 2.1E-39 323.9 19.8 251 800-1075 19-276 (287)
271 2pml_X PFPK7, Ser/Thr protein 100.0 9.8E-36 3.4E-40 340.3 13.6 263 802-1075 30-322 (348)
272 1q8y_A SR protein kinase; tran 100.0 3.1E-35 1E-39 339.6 17.6 269 802-1082 18-342 (373)
273 3o6n_A APL1; leucine-rich repe 100.0 5.2E-34 1.8E-38 331.2 26.5 308 294-643 45-352 (390)
274 2eu9_A Dual specificity protei 100.0 2.6E-34 8.9E-39 329.3 23.2 263 802-1075 18-333 (355)
275 3cek_A Dual specificity protei 100.0 7.3E-35 2.5E-39 327.7 17.3 252 801-1076 26-293 (313)
276 3fhr_A MAP kinase-activated pr 100.0 9.8E-35 3.3E-39 329.6 18.2 260 801-1081 26-295 (336)
277 3aln_A Dual specificity mitoge 100.0 5.3E-35 1.8E-39 331.0 15.8 256 802-1075 21-285 (327)
278 4fcg_A Uncharacterized protein 100.0 1.1E-34 3.6E-39 327.5 16.3 276 22-353 24-312 (328)
279 3oja_B Anopheles plasmodium-re 100.0 9.4E-34 3.2E-38 347.3 25.8 311 341-669 50-360 (597)
280 3p23_A Serine/threonine-protei 100.0 1.3E-34 4.6E-39 338.8 17.2 251 802-1075 23-283 (432)
281 4fmz_A Internalin; leucine ric 100.0 4E-33 1.4E-37 318.4 27.3 307 314-667 40-346 (347)
282 2rio_A Serine/threonine-protei 100.0 1.2E-34 4.2E-39 340.4 14.8 255 804-1075 16-295 (434)
283 2iwi_A Serine/threonine-protei 100.0 1.2E-34 4.1E-39 325.8 13.6 242 800-1076 28-284 (312)
284 4fmz_A Internalin; leucine ric 100.0 4E-33 1.4E-37 318.4 25.9 305 292-643 42-346 (347)
285 3a99_A Proto-oncogene serine/t 100.0 1.2E-34 4E-39 326.9 12.6 241 801-1076 41-294 (320)
286 2dyl_A Dual specificity mitoge 100.0 1.9E-33 6.4E-38 317.0 20.3 249 802-1075 24-283 (318)
287 3uqc_A Probable conserved tran 100.0 5.2E-34 1.8E-38 315.4 13.7 234 803-1086 31-269 (286)
288 3qa8_A MGC80376 protein; kinas 100.0 5.2E-34 1.8E-38 342.9 14.2 263 802-1072 13-294 (676)
289 1ogq_A PGIP-2, polygalacturona 100.0 1.7E-33 5.9E-38 315.7 15.0 256 439-705 51-310 (313)
290 2pzi_A Probable serine/threoni 100.0 9E-33 3.1E-37 343.3 19.8 239 802-1080 79-326 (681)
291 2ft3_A Biglycan; proteoglycan, 100.0 1.1E-31 3.9E-36 304.2 26.9 288 367-665 34-331 (332)
292 2ft3_A Biglycan; proteoglycan, 100.0 1.9E-31 6.5E-36 302.3 25.5 267 367-641 55-331 (332)
293 1xku_A Decorin; proteoglycan, 100.0 3.2E-31 1.1E-35 300.3 26.9 290 294-617 31-330 (330)
294 1z7x_W Ribonuclease inhibitor; 100.0 1.5E-35 5E-40 352.7 -9.7 356 294-668 3-412 (461)
295 3m2w_A MAP kinase-activated pr 100.0 3.4E-32 1.1E-36 303.7 16.7 238 802-1082 16-265 (299)
296 1xku_A Decorin; proteoglycan, 100.0 1.2E-30 4E-35 295.6 29.0 289 319-641 32-330 (330)
297 3dzo_A Rhoptry kinase domain; 100.0 2E-32 7E-37 319.2 14.5 243 802-1074 77-362 (413)
298 1z7x_W Ribonuclease inhibitor; 100.0 3E-35 1E-39 350.1 -10.5 355 318-692 3-412 (461)
299 2vuw_A Serine/threonine-protei 100.0 3.2E-32 1.1E-36 309.3 7.9 191 802-1008 19-278 (336)
300 3ogk_B Coronatine-insensitive 100.0 6.4E-33 2.2E-37 341.0 -2.8 454 55-567 41-547 (592)
301 4fcg_A Uncharacterized protein 100.0 1.5E-30 5.2E-35 293.5 11.2 278 33-402 21-313 (328)
302 3ogk_B Coronatine-insensitive 100.0 9.8E-32 3.3E-36 330.5 -5.1 81 294-375 164-252 (592)
303 2z80_A TOLL-like receptor 2, v 100.0 5.9E-29 2E-33 284.4 18.2 284 342-670 31-317 (353)
304 3g06_A SSPH2 (leucine-rich rep 100.0 6.7E-29 2.3E-33 300.9 17.6 294 39-414 7-308 (622)
305 2z80_A TOLL-like receptor 2, v 100.0 1.2E-28 4.2E-33 281.7 18.0 286 316-646 29-317 (353)
306 1wwl_A Monocyte differentiatio 100.0 5.7E-30 1.9E-34 287.2 5.4 253 86-404 39-310 (312)
307 2z66_A Variable lymphocyte rec 100.0 5.8E-28 2E-32 270.3 20.6 261 294-555 28-295 (306)
308 2z66_A Variable lymphocyte rec 100.0 3E-28 1E-32 272.7 18.0 182 413-595 77-261 (306)
309 1wwl_A Monocyte differentiatio 100.0 1.5E-29 5.3E-34 283.6 6.6 203 42-257 19-245 (312)
310 1ozn_A Reticulon 4 receptor; N 100.0 1.4E-27 4.7E-32 264.3 19.2 236 319-555 33-269 (285)
311 1ozn_A Reticulon 4 receptor; N 99.9 2.4E-27 8.2E-32 262.4 20.6 268 272-544 14-284 (285)
312 3oja_A Leucine-rich immune mol 99.9 1.3E-28 4.6E-33 292.8 9.3 234 414-685 34-269 (487)
313 3zyj_A Leucine-rich repeat-con 99.9 1.1E-26 3.8E-31 273.8 24.5 246 296-546 45-291 (440)
314 3zyi_A Leucine-rich repeat-con 99.9 9.6E-27 3.3E-31 275.4 23.8 247 296-571 56-303 (452)
315 3o53_A Protein LRIM1, AGAP0063 99.9 1.1E-28 3.7E-33 277.4 6.6 263 396-672 16-281 (317)
316 3zyi_A Leucine-rich repeat-con 99.9 8.4E-27 2.9E-31 275.9 22.8 247 393-668 57-304 (452)
317 3zyj_A Leucine-rich repeat-con 99.9 1.2E-26 4.2E-31 273.4 24.1 247 368-643 45-292 (440)
318 3g06_A SSPH2 (leucine-rich rep 99.9 1.8E-26 6.2E-31 279.6 25.9 266 343-676 41-306 (622)
319 3o53_A Protein LRIM1, AGAP0063 99.9 6.9E-28 2.4E-32 270.8 8.4 267 296-624 12-281 (317)
320 2p1m_B Transport inhibitor res 99.9 4.5E-30 1.5E-34 315.8 -14.3 186 55-250 34-245 (594)
321 3oja_A Leucine-rich immune mol 99.9 1.3E-26 4.5E-31 275.6 11.3 237 388-662 32-270 (487)
322 2p1m_B Transport inhibitor res 99.9 1.5E-28 5E-33 302.3 -8.4 87 580-667 430-519 (594)
323 4azs_A Methyltransferase WBDD; 99.9 6.2E-27 2.1E-31 282.1 2.9 183 810-1005 241-436 (569)
324 2z62_A TOLL-like receptor 4, v 99.9 3E-24 1E-28 236.2 19.5 208 463-671 29-241 (276)
325 2z62_A TOLL-like receptor 4, v 99.9 1.2E-23 4.2E-28 231.3 22.6 221 371-595 12-237 (276)
326 2o6q_A Variable lymphocyte rec 99.9 7.2E-23 2.5E-27 224.3 22.6 202 295-499 17-218 (270)
327 3rfs_A Internalin B, repeat mo 99.9 1E-23 3.5E-28 231.2 15.4 225 296-533 21-245 (272)
328 3rfs_A Internalin B, repeat mo 99.9 1.8E-23 6.3E-28 229.2 15.9 228 318-558 19-246 (272)
329 2o6q_A Variable lymphocyte rec 99.9 1.5E-22 5.2E-27 221.7 23.2 203 319-524 17-219 (270)
330 3goz_A Leucine-rich repeat-con 99.9 1.6E-24 5.5E-29 248.2 6.2 255 298-552 2-302 (362)
331 3en9_A Glycoprotease, O-sialog 99.9 4.2E-24 1.4E-28 256.0 9.2 186 806-1008 339-539 (540)
332 1p9a_G Platelet glycoprotein I 99.9 2.2E-22 7.4E-27 222.4 21.6 177 319-499 32-208 (290)
333 1p9a_G Platelet glycoprotein I 99.9 2.7E-22 9.1E-27 221.7 22.0 203 314-523 6-208 (290)
334 3goz_A Leucine-rich repeat-con 99.9 1E-24 3.5E-29 249.8 2.5 257 347-623 3-301 (362)
335 4glp_A Monocyte differentiatio 99.9 2.2E-23 7.5E-28 233.4 12.9 205 160-427 91-307 (310)
336 3m19_A Variable lymphocyte rec 99.9 1.3E-22 4.5E-27 219.6 16.5 189 55-255 4-194 (251)
337 3cvr_A Invasion plasmid antige 99.9 8E-24 2.7E-28 253.2 7.3 216 43-341 32-253 (571)
338 2ca6_A RAN GTPase-activating p 99.9 1.5E-24 5E-29 251.2 -1.1 249 406-671 24-320 (386)
339 2ast_B S-phase kinase-associat 99.9 1.6E-23 5.6E-28 237.6 6.4 252 296-555 49-314 (336)
340 2ca6_A RAN GTPase-activating p 99.9 5.9E-24 2E-28 246.1 0.9 242 309-550 23-319 (386)
341 4glp_A Monocyte differentiatio 99.9 1.4E-22 5E-27 226.7 12.1 222 415-642 65-306 (310)
342 2ast_B S-phase kinase-associat 99.9 2.2E-23 7.4E-28 236.5 5.3 254 318-579 47-314 (336)
343 2xwt_C Thyrotropin receptor; s 99.9 8E-22 2.7E-26 211.8 16.2 179 294-475 31-218 (239)
344 3m19_A Variable lymphocyte rec 99.9 1.6E-21 5.5E-26 211.0 18.0 181 488-671 16-196 (251)
345 2xwt_C Thyrotropin receptor; s 99.9 1.5E-21 5E-26 209.7 16.2 197 318-520 31-236 (239)
346 4ay9_X Follicle-stimulating ho 99.9 2.3E-21 7.8E-26 220.8 16.1 207 180-427 6-215 (350)
347 1h6u_A Internalin H; cell adhe 99.9 6.3E-21 2.2E-25 212.8 18.2 192 316-523 39-230 (308)
348 4ay9_X Follicle-stimulating ho 99.8 6.5E-21 2.2E-25 217.0 16.9 242 369-641 12-257 (350)
349 1h6u_A Internalin H; cell adhe 99.8 1.5E-20 5E-25 209.9 19.1 192 293-500 40-231 (308)
350 1zar_A RIO2 kinase; serine kin 99.8 1.8E-21 6.2E-26 213.5 8.7 149 798-980 85-252 (282)
351 3cvr_A Invasion plasmid antige 99.8 2.4E-20 8.2E-25 223.1 15.1 188 439-654 60-254 (571)
352 4b8c_D Glucose-repressible alc 99.8 1.6E-21 5.5E-26 242.3 3.4 215 24-257 131-358 (727)
353 2o6s_A Variable lymphocyte rec 99.8 1.9E-19 6.6E-24 188.6 16.7 159 391-556 29-187 (208)
354 2o6s_A Variable lymphocyte rec 99.8 3.1E-19 1.1E-23 187.0 18.1 181 321-535 10-190 (208)
355 3e6j_A Variable lymphocyte rec 99.8 3.4E-19 1.2E-23 189.5 15.2 158 55-256 18-175 (229)
356 1dce_A Protein (RAB geranylger 99.8 1.1E-21 3.9E-26 236.1 -5.4 35 217-253 442-476 (567)
357 1h6t_A Internalin B; cell adhe 99.8 1.4E-18 4.8E-23 192.0 14.9 171 315-499 43-213 (291)
358 1m9s_A Internalin B; cell inva 99.8 1.4E-18 4.9E-23 210.3 16.2 189 296-500 23-211 (605)
359 1m9s_A Internalin B; cell inva 99.8 2.1E-18 7.2E-23 208.8 16.6 189 161-403 22-210 (605)
360 1dce_A Protein (RAB geranylger 99.8 6.7E-21 2.3E-25 229.4 -5.6 203 182-445 347-567 (567)
361 1h6t_A Internalin B; cell adhe 99.8 2.6E-18 9E-23 189.8 15.0 190 319-524 25-214 (291)
362 2xot_A Amphoterin-induced prot 99.8 2.2E-18 7.5E-23 196.9 14.4 156 320-475 41-202 (361)
363 2xot_A Amphoterin-induced prot 99.8 6.1E-18 2.1E-22 193.2 16.4 176 369-547 21-202 (361)
364 2v9t_B SLIT homolog 2 protein 99.7 1.1E-17 3.6E-22 176.7 16.2 128 297-427 14-141 (220)
365 2v9t_B SLIT homolog 2 protein 99.7 1.6E-17 5.5E-22 175.3 16.5 152 369-523 14-165 (220)
366 2v70_A SLIT-2, SLIT homolog 2 99.7 2.1E-17 7.1E-22 174.5 16.9 131 369-499 35-166 (220)
367 3e6j_A Variable lymphocyte rec 99.7 1.3E-17 4.6E-22 177.2 15.1 135 534-669 40-174 (229)
368 2v70_A SLIT-2, SLIT homolog 2 99.7 1.8E-17 6.2E-22 174.9 15.9 155 369-526 14-169 (220)
369 4b8c_D Glucose-repressible alc 99.7 2.2E-18 7.4E-23 214.2 7.1 223 414-667 173-404 (727)
370 1xeu_A Internalin C; cellular 99.7 6.4E-18 2.2E-22 183.6 9.2 166 295-475 20-185 (263)
371 1zth_A RIO1 serine protein kin 99.7 1.5E-17 5.3E-22 180.0 11.2 135 805-954 49-219 (258)
372 1xeu_A Internalin C; cellular 99.7 1.6E-17 5.3E-22 180.6 11.0 171 316-501 17-187 (263)
373 4ezg_A Putative uncharacterize 99.7 1.7E-17 5.7E-22 172.1 10.7 154 507-668 41-195 (197)
374 3sb4_A Hypothetical leucine ri 99.7 1.6E-17 5.6E-22 187.2 10.9 296 206-540 13-327 (329)
375 3sb4_A Hypothetical leucine ri 99.7 1.3E-17 4.5E-22 188.0 10.0 293 79-444 12-327 (329)
376 4ezg_A Putative uncharacterize 99.7 6.5E-17 2.2E-21 167.7 12.9 151 341-499 43-194 (197)
377 1w8a_A SLIT protein; signaling 99.7 2.2E-16 7.4E-21 162.8 12.9 132 513-647 11-143 (192)
378 1w8a_A SLIT protein; signaling 99.7 8.4E-16 2.9E-20 158.4 15.3 133 536-671 10-143 (192)
379 2ell_A Acidic leucine-rich nuc 99.6 9.9E-16 3.4E-20 154.3 12.7 137 533-673 23-165 (168)
380 4fdw_A Leucine rich hypothetic 99.6 1.1E-14 3.9E-19 167.4 20.4 268 296-595 115-383 (401)
381 4fdw_A Leucine rich hypothetic 99.6 3.2E-14 1.1E-18 163.7 22.7 265 318-619 113-383 (401)
382 2je0_A Acidic leucine-rich nuc 99.6 1.6E-15 5.5E-20 149.4 9.8 129 533-663 16-149 (149)
383 2ell_A Acidic leucine-rich nuc 99.6 2E-15 6.7E-20 152.1 10.6 132 318-451 24-160 (168)
384 2je0_A Acidic leucine-rich nuc 99.6 2.9E-15 9.8E-20 147.6 8.5 126 319-446 18-148 (149)
385 2wfh_A SLIT homolog 2 protein 99.6 1.5E-14 5E-19 149.0 13.6 127 537-667 13-139 (193)
386 4fs7_A Uncharacterized protein 99.6 8E-14 2.7E-18 161.1 20.7 327 312-657 65-391 (394)
387 2o6r_A Variable lymphocyte rec 99.6 1.7E-14 5.8E-19 146.6 13.2 133 536-671 9-141 (177)
388 2wfh_A SLIT homolog 2 protein 99.6 2.1E-14 7.1E-19 147.9 14.0 127 297-427 13-139 (193)
389 4fs7_A Uncharacterized protein 99.6 1E-13 3.4E-18 160.3 20.9 219 359-589 155-373 (394)
390 2o6r_A Variable lymphocyte rec 99.5 4.7E-14 1.6E-18 143.3 14.7 132 296-430 9-140 (177)
391 4gyi_A RIO2 kinase; protein ki 99.5 5.8E-15 2E-19 165.3 8.3 135 805-953 97-264 (397)
392 1ds9_A Outer arm dynein; leuci 99.5 1.5E-16 5E-21 165.1 -5.6 149 89-253 17-185 (198)
393 1ds9_A Outer arm dynein; leuci 99.5 4.1E-16 1.4E-20 161.7 -4.7 153 509-668 17-186 (198)
394 1a9n_A U2A', U2A'; complex (nu 99.5 3.4E-14 1.2E-18 144.2 9.2 132 530-667 15-153 (176)
395 1a9n_A U2A', U2A'; complex (nu 99.4 9.1E-14 3.1E-18 140.9 8.2 132 362-498 15-152 (176)
396 3g39_A Variable lymphocyte rec 99.4 7.5E-13 2.6E-17 133.1 10.5 107 140-255 11-117 (170)
397 3g39_A Variable lymphocyte rec 99.4 1.2E-12 4E-17 131.8 11.7 107 560-669 11-117 (170)
398 2r9u_A Variable lymphocyte rec 99.4 1.3E-12 4.3E-17 132.0 10.5 104 141-254 15-119 (174)
399 2r9u_A Variable lymphocyte rec 99.4 2.8E-12 9.5E-17 129.4 11.9 105 561-668 15-119 (174)
400 4gt6_A Cell surface protein; l 99.3 6E-11 2.1E-15 136.9 23.5 156 311-496 56-215 (394)
401 4gt6_A Cell surface protein; l 99.3 8.4E-11 2.9E-15 135.7 23.5 151 294-450 64-217 (394)
402 3un9_A NLR family member X1; l 99.3 1.5E-13 5.2E-18 156.4 -3.6 158 294-451 72-252 (372)
403 3un9_A NLR family member X1; l 99.3 2.4E-13 8.3E-18 154.8 -3.1 187 216-451 72-283 (372)
404 2ifg_A High affinity nerve gro 99.2 1.5E-11 5.2E-16 139.4 9.5 107 56-173 8-116 (347)
405 2ifg_A High affinity nerve gro 99.1 4E-11 1.4E-15 135.9 8.6 101 564-667 14-116 (347)
406 3tm0_A Aminoglycoside 3'-phosp 99.1 2.9E-10 9.9E-15 123.3 10.6 142 799-952 10-212 (263)
407 4h09_A Hypothetical leucine ri 99.0 1.5E-08 5E-13 116.2 23.4 108 530-640 236-343 (379)
408 4h09_A Hypothetical leucine ri 99.0 2.5E-08 8.6E-13 114.3 23.2 310 294-629 46-355 (379)
409 3rw6_A Nuclear RNA export fact 99.0 1.2E-11 3.9E-16 132.2 -5.3 160 55-246 77-257 (267)
410 1nd4_A Aminoglycoside 3'-phosp 99.0 1.4E-09 4.9E-14 117.5 10.7 133 804-952 21-213 (264)
411 2ra8_A Uncharacterized protein 98.9 5.7E-10 2E-14 125.7 3.2 163 179-377 167-341 (362)
412 2ra8_A Uncharacterized protein 98.8 7.3E-10 2.5E-14 124.9 3.0 181 66-254 107-321 (362)
413 3dxp_A Putative acyl-COA dehyd 98.8 1E-08 3.4E-13 116.6 10.9 139 807-953 42-248 (359)
414 3sg8_A APH(2'')-ID; antibiotic 98.6 6.4E-09 2.2E-13 115.2 1.4 186 808-1007 25-287 (304)
415 1io0_A Tropomodulin; LRR prote 98.4 6.2E-08 2.1E-12 98.4 1.0 122 310-451 28-164 (185)
416 1io0_A Tropomodulin; LRR prote 98.4 9.8E-08 3.3E-12 96.9 2.1 123 333-475 27-164 (185)
417 3rw6_A Nuclear RNA export fact 98.3 2.4E-08 8.3E-13 106.4 -2.8 65 581-647 169-237 (267)
418 3r70_A Aminoglycoside phosphot 98.3 1.8E-06 6E-11 96.1 10.8 134 804-954 38-238 (320)
419 3tdw_A Gentamicin resistance p 98.2 5.4E-06 1.8E-10 91.5 11.6 134 808-953 24-224 (306)
420 3d1u_A Putative fructosamine-3 98.1 8.8E-06 3E-10 88.6 11.9 76 806-886 18-97 (288)
421 3ovc_A Hygromycin-B 4-O-kinase 97.9 2.3E-05 7.8E-10 88.5 10.2 144 806-954 44-244 (362)
422 4gkh_A Aminoglycoside 3'-phosp 97.9 5.1E-05 1.7E-09 82.0 12.1 131 810-952 31-222 (272)
423 3ats_A Putative uncharacterize 97.9 2E-05 6.8E-10 89.1 8.5 80 808-887 25-121 (357)
424 2q83_A YTAA protein; 2635576, 97.7 0.00018 6.1E-09 80.6 12.8 140 809-952 38-251 (346)
425 3e4g_A ATP synthase subunit S, 97.6 2E-05 6.7E-10 77.8 2.7 34 487-520 62-95 (176)
426 3e4g_A ATP synthase subunit S, 97.6 2.4E-05 8.3E-10 77.1 3.0 83 463-545 62-150 (176)
427 2olc_A MTR kinase, methylthior 97.6 0.00023 7.9E-09 81.6 11.7 74 808-884 35-120 (397)
428 1pgv_A TMD-1, tropomodulin TMD 97.3 8.9E-05 3E-09 74.6 2.8 64 364-427 96-170 (197)
429 1pgv_A TMD-1, tropomodulin TMD 97.2 0.00012 4E-09 73.6 2.8 112 339-450 38-169 (197)
430 1zyl_A Hypothetical protein YI 97.1 0.0039 1.3E-07 69.1 13.9 158 792-953 10-223 (328)
431 3f7w_A Putative fructosamine-3 97.1 0.0023 8E-08 69.5 11.7 78 804-886 16-97 (288)
432 3rfe_A Platelet glycoprotein I 97.1 0.00059 2E-08 64.1 5.7 57 141-197 11-68 (130)
433 2ppq_A HSK, HK, homoserine kin 97.0 0.003 1E-07 69.8 12.2 159 792-952 6-216 (322)
434 2pyw_A Uncharacterized protein 96.9 0.0032 1.1E-07 72.5 11.4 78 921-1003 230-312 (420)
435 3dxq_A Choline/ethanolamine ki 96.9 0.0019 6.5E-08 70.7 9.0 71 808-886 23-95 (301)
436 3feg_A Choline/ethanolamine ki 96.7 0.0044 1.5E-07 69.7 10.0 140 809-953 56-254 (379)
437 3csv_A Aminoglycoside phosphot 96.7 0.0061 2.1E-07 67.7 11.0 141 809-954 24-218 (333)
438 3jr1_A Putative fructosamine-3 96.7 0.011 3.8E-07 64.6 12.6 137 808-949 41-232 (312)
439 3rfe_A Platelet glycoprotein I 96.3 0.0054 1.8E-07 57.5 6.5 57 609-667 11-68 (130)
440 3c5i_A Choline kinase; choline 96.3 0.0078 2.7E-07 67.9 8.7 73 808-885 38-120 (369)
441 1nw1_A Choline kinase (49.2 KD 96.1 0.013 4.6E-07 67.3 9.5 72 808-885 78-158 (429)
442 2qg7_A Ethanolamine kinase PV0 95.7 0.043 1.5E-06 63.4 11.4 73 809-886 114-188 (458)
443 3i1a_A Spectinomycin phosphotr 94.3 0.11 3.7E-06 57.6 9.5 31 923-953 206-236 (339)
444 3f2s_A CK, chetk-alpha, cholin 92.9 0.23 8E-06 55.8 9.0 29 924-952 245-279 (401)
445 3mes_A Choline kinase; malaria 92.9 0.27 9.3E-06 55.9 9.6 73 809-886 76-157 (424)
446 2yle_A Protein spire homolog 1 92.6 0.62 2.1E-05 46.9 10.5 101 885-1006 34-135 (229)
447 3g15_A CK, chetk-alpha, cholin 86.0 1.3 4.4E-05 50.1 7.9 30 924-953 245-280 (401)
448 4ann_A ESSB; membrane protein, 73.5 6.8 0.00023 39.3 7.3 116 856-1008 43-158 (215)
449 3cxl_A N-chimerin; SH2, RHO-GA 72.5 0.47 1.6E-05 54.7 -1.7 59 807-868 146-214 (463)
450 4ano_A ESSB; membrane protein, 65.9 18 0.0006 36.5 8.4 114 856-1007 48-162 (219)
451 3ls8_A Phosphatidylinositol 3- 45.0 1.8E+02 0.0061 34.1 13.3 46 903-952 454-501 (614)
452 2x6h_A GH13170P, VPS34, phosph 33.6 2.9E+02 0.0098 32.9 12.9 45 904-952 529-575 (696)
453 1cja_A Protein (actin-fragmin 33.2 2.5E+02 0.0086 30.0 11.1 140 805-953 71-237 (342)
454 2lz0_A Uncharacterized protein 31.4 1.1E+02 0.0039 26.2 6.8 42 453-495 11-52 (100)
455 2lz0_A Uncharacterized protein 28.6 82 0.0028 27.1 5.4 41 334-375 12-52 (100)
456 2l8s_A Integrin alpha-1; trans 20.2 19 0.00066 27.0 -0.3 10 727-736 16-25 (54)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=5.4e-90 Score=871.05 Aligned_cols=669 Identities=32% Similarity=0.497 Sum_probs=426.5
Q ss_pred CChhhHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcccceEecCCcEeEEecCCCccccc---cccccccccccceEEcc
Q 047739 22 DRSPEIEALTSFKLNLHDPLGALNGWDSSTPAAPCDWRGVACTNNRVTELRLPRLQLSGR---ISDHLSNLRMLRKLSLR 98 (1099)
Q Consensus 22 ~~~~~~~~l~~~k~~~~~~~~~l~~w~~~~~~~~c~w~gv~c~~~~v~~l~l~~~~l~g~---~~~~l~~l~~L~~L~L~ 98 (1099)
+.++|++||++||+++.||. ++++|+.++ +||+|.||+|+.+||++|+|+++++.|. +++++++|++|+.++++
T Consensus 9 ~~~~~~~all~~k~~~~~~~-~l~~W~~~~--~~C~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~ 85 (768)
T 3rgz_A 9 SLYREIHQLISFKDVLPDKN-LLPDWSSNK--NPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLS 85 (768)
T ss_dssp CHHHHHHHHHHHHTTCSCTT-SSTTCCTTS--CGGGSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECT
T ss_pred CCHHHHHHHHHHHhhCCCcc-cccCCCCCC--CCcCCcceEECCCcEEEEECCCCCcCCccCccChhHhccCcccccCCc
Confidence 35589999999999999998 999998544 5999999999999999999999999998 87766666666666666
Q ss_pred CCccCcccCcccccCCcccEEEeccccCCCccCc--ccccCCCCceeecccccCCCcccCCcc---cccceeeCCCCccC
Q 047739 99 SNSFNGTIPATLAQCTLLRAVFLQYNSLSGNLPA--NIGNLSNLEILNVAANRLSGEIANDLP---RNLKYFDLSSNGFS 173 (1099)
Q Consensus 99 ~n~~~~~~p~~~~~l~~L~~L~l~~n~l~g~~p~--~~~~l~~L~~L~ls~N~l~~~i~~~~~---~~L~~L~ls~N~l~ 173 (1099)
.|.+. .+|..++++++|++|||++|.++|.+|. .++++++|++|+|++|.+++.+|..+. ++|++|+|++|+++
T Consensus 86 ~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~ 164 (768)
T 3rgz_A 86 NSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSIS 164 (768)
T ss_dssp TSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCE
T ss_pred CCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccC
Confidence 55543 2445666666666666666666666666 566666666666666666666555431 45666666666666
Q ss_pred CCCCCC---Ccccccccccccccccccccccc--------------ccccccCccccccCceeEEEccCCcCCccChhhh
Q 047739 174 GPIPTS---ISNLSQLQLINFSFNKFSREVPA--------------TFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAI 236 (1099)
Q Consensus 174 ~~~p~~---~~~l~~L~~L~ls~N~l~~~~~~--------------~~~g~lp~~l~~l~~L~~L~l~~N~l~~~~p~~~ 236 (1099)
+.+|.. +.++++|++|++++|++++..+. .+.+.+|. ++++++|++|++++|++++.+|.+|
T Consensus 165 ~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l 243 (768)
T 3rgz_A 165 GANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAI 243 (768)
T ss_dssp EETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHT
T ss_pred CcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHH
Confidence 555544 45555555555555555422110 00023333 5555555555555555555555555
Q ss_pred cCCCCccEEEcccccCCCccCcccccccCCCCCcceEEEeccccccccCCCCCCCCCCceeEEEcCCCccccCcchhccC
Q 047739 237 GALPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTR 316 (1099)
Q Consensus 237 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~ 316 (1099)
+.+++|++|+|++|++++.+|.. ..++++.|++++|.+...........+++|++|+|++|++++.+|..|..
T Consensus 244 ~~l~~L~~L~Ls~n~l~~~~~~~-------~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~ 316 (768)
T 3rgz_A 244 STCTELKLLNISSNQFVGPIPPL-------PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGS 316 (768)
T ss_dssp TTCSSCCEEECCSSCCEESCCCC-------CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGG
T ss_pred hcCCCCCEEECCCCcccCccCcc-------ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhc
Confidence 55555555555555555544432 12445555555555553222222333355555555555555555555555
Q ss_pred CCCccEEeCCCCccccCchhh-hCCCCCCCEEEccCCccCccCCccccCCC-CCCEEEccCCcCCCCCCccccC--CCCC
Q 047739 317 ASTLTRLDVSGNSISGKIPAQ-IGGLWRLEELKMANNSFGGAVPVEIKQCS-SLSLLDLEGNRFSGEIPEFLGD--IRGL 392 (1099)
Q Consensus 317 l~~L~~L~Ls~N~i~~~~p~~-~~~l~~L~~L~L~~n~l~~~~~~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~--l~~L 392 (1099)
+++|++|+|++|.+++.+|.. |+++++|++|+|++|++++.+|..+.+++ +|++|+|++|++++.+|..+.. +++|
T Consensus 317 l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L 396 (768)
T 3rgz_A 317 CSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTL 396 (768)
T ss_dssp CTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCC
T ss_pred CCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCc
Confidence 555555555555555445443 55555555555555555555555555554 5555555555555555555444 4555
Q ss_pred CeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCC
Q 047739 393 KSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGN 472 (1099)
Q Consensus 393 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N 472 (1099)
++|++++|.+++.+|..+.++++|++|+|++|++++.+|..+..+++|+.|++++|.+++.+|..+..+++|+.|+|++|
T Consensus 397 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N 476 (768)
T 3rgz_A 397 QELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFN 476 (768)
T ss_dssp CEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSS
T ss_pred cEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCC
Confidence 55666655555555555555555666666666555555555555555666666666555555555555555666666666
Q ss_pred cCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhcccccceecccccccCCCCCC
Q 047739 473 AFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPA 552 (1099)
Q Consensus 473 ~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 552 (1099)
++++.+|..+.++++|++|++++|++++.+|..++.+++|+.|+|++|++++.+|..+..+++|++|++++|+++|.+|.
T Consensus 477 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~ 556 (768)
T 3rgz_A 477 DLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 556 (768)
T ss_dssp CCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCG
T ss_pred cccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCCh
Confidence 55555555555555566666666655555555555555566666666655555555555555566666666655555555
Q ss_pred cccccceee----------------------------------------------EEEccCCcCCCCCCCCCCCCCCCce
Q 047739 553 TFSFLRSVV----------------------------------------------VLSFSGNHISGSIPPELGNCSDLEV 586 (1099)
Q Consensus 553 ~l~~l~~L~----------------------------------------------~L~ls~N~l~~~~p~~l~~l~~L~~ 586 (1099)
.+.....+. .++++.|.++|.+|..++.+++|+.
T Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~ 636 (768)
T 3rgz_A 557 AMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMF 636 (768)
T ss_dssp GGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCE
T ss_pred HHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccE
Confidence 443322211 1222334445555666677788888
Q ss_pred EEecCCcccCcCCcchhccCcccEEeccCccccccCCcccCCCCCCCEEECcCccccccCChhhhccCCCCeeecCCCcC
Q 047739 587 LELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNL 666 (1099)
Q Consensus 587 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l 666 (1099)
|+|++|+++|.+|..++.+++|+.|+|++|+++|.+|..++.+++|+.|+|++|+++|.+|..+.++++|+.||+++|++
T Consensus 637 LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l 716 (768)
T 3rgz_A 637 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNL 716 (768)
T ss_dssp EECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEE
T ss_pred EECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcc
Confidence 89999998888888888888899999999998888888888888899999999998888888888888899999999999
Q ss_pred CCcCCCCccccccccccccCCCCcccCCCCccCCCCCCCCCCCCcc
Q 047739 667 SGEIPANLSSIFGLMNFNVSSNNLQAFANNQDLCGKPLGRKCENAD 712 (1099)
Q Consensus 667 ~~~~p~~~~~~~~l~~l~l~~n~~~~~~~n~~l~~~~~~~~c~~~~ 712 (1099)
+|.+|..- .+.++. ...|.+|+++||.|+. .|....
T Consensus 717 ~g~iP~~~----~~~~~~-----~~~~~gN~~Lcg~~l~-~C~~~~ 752 (768)
T 3rgz_A 717 SGPIPEMG----QFETFP-----PAKFLNNPGLCGYPLP-RCDPSN 752 (768)
T ss_dssp EEECCSSS----SGGGSC-----GGGGCSCTEEESTTSC-CCCSCC
T ss_pred cccCCCch----hhccCC-----HHHhcCCchhcCCCCc-CCCCCc
Confidence 88888652 122333 3468899999999987 787543
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=6.1e-73 Score=715.36 Aligned_cols=588 Identities=31% Similarity=0.486 Sum_probs=367.1
Q ss_pred cccceEEccCCccCcc---cCcccccCCcccEEEeccccCCCccCcccccCCCCceeecccccCCCcccC--Ccc--ccc
Q 047739 90 RMLRKLSLRSNSFNGT---IPATLAQCTLLRAVFLQYNSLSGNLPANIGNLSNLEILNVAANRLSGEIAN--DLP--RNL 162 (1099)
Q Consensus 90 ~~L~~L~L~~n~~~~~---~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~N~l~~~i~~--~~~--~~L 162 (1099)
.+++.|||+++.+.|. +|+.++++++|+.++++.|.+. .+|..++.+++|++|||++|.++|.+|. .+. ++|
T Consensus 50 ~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L 128 (768)
T 3rgz_A 50 DKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGL 128 (768)
T ss_dssp TEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTC
T ss_pred CcEEEEECCCCCcCCccCccChhHhccCcccccCCcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCC
Confidence 3678999999999998 9999999999999998888775 4668999999999999999999999988 776 799
Q ss_pred ceeeCCCCccCCCCCCCC-ccccccccccccccccccccccccccccCccccccCceeEEEccCCcCCccChhhhcCCCC
Q 047739 163 KYFDLSSNGFSGPIPTSI-SNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAIGALPK 241 (1099)
Q Consensus 163 ~~L~ls~N~l~~~~p~~~-~~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 241 (1099)
++|+|++|.+++.+|..+ .++++|++|+|++|++++..+..+. .++++++|++|++++|.+++..|. ..+++
T Consensus 129 ~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~-----~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~ 201 (768)
T 3rgz_A 129 KFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWV-----LSDGCGELKHLAISGNKISGDVDV--SRCVN 201 (768)
T ss_dssp CEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHH-----HTTCCTTCCEEECCSSEEESCCBC--TTCTT
T ss_pred CEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhh-----hhccCCCCCEEECCCCcccccCCc--ccCCc
Confidence 999999999999999876 8999999999999999854443210 034455555555555555544332 44555
Q ss_pred ccEEEcccccCCCccCcccccccCCCCCcceEEEeccccccccCCCCCCCCCCceeEEEcCCCc----------------
Q 047739 242 LQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQ---------------- 305 (1099)
Q Consensus 242 L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~---------------- 305 (1099)
|++|+|++|++++.+|. |.. .++|++|++++|.+...... ....+++|++|+|++|+
T Consensus 202 L~~L~Ls~n~l~~~~~~--l~~----l~~L~~L~Ls~n~l~~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L 274 (768)
T 3rgz_A 202 LEFLDVSSNNFSTGIPF--LGD----CSALQHLDISGNKLSGDFSR-AISTCTELKLLNISSNQFVGPIPPLPLKSLQYL 274 (768)
T ss_dssp CCEEECCSSCCCSCCCB--CTT----CCSCCEEECCSSCCCSCHHH-HTTTCSSCCEEECCSSCCEESCCCCCCTTCCEE
T ss_pred CCEEECcCCcCCCCCcc--ccc----CCCCCEEECcCCcCCCcccH-HHhcCCCCCEEECCCCcccCccCccccCCCCEE
Confidence 55555555555544443 221 23445555555544422111 11223444445555544
Q ss_pred ------cccCcchhccCC-CCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCcc-ccCCCCCCEEEccCCc
Q 047739 306 ------IRGAFPLWLTRA-STLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVE-IKQCSSLSLLDLEGNR 377 (1099)
Q Consensus 306 ------l~~~~~~~~~~l-~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~-l~~l~~L~~L~Ls~N~ 377 (1099)
+++.+|..+... ++|++|+|++|.+++.+|..|+++++|++|+|++|.+.+.+|.. +..+++|++|+|++|+
T Consensus 275 ~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~ 354 (768)
T 3rgz_A 275 SLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNE 354 (768)
T ss_dssp ECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSE
T ss_pred ECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCc
Confidence 444444444332 44555555555444444444444444555555555444444433 4444445555555554
Q ss_pred CCCCCCccccCCC-CCCeeeccCccccccCCccCCC--CCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCcccc
Q 047739 378 FSGEIPEFLGDIR-GLKSLTLAANLFSGSIPASFRN--LPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEV 454 (1099)
Q Consensus 378 l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 454 (1099)
+++.+|..+.+++ +|++|++++|.+++.+|..+.. +++|++|++++|++++.+|..+.++++|++|+|++|.+++.+
T Consensus 355 l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 434 (768)
T 3rgz_A 355 FSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTI 434 (768)
T ss_dssp EEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCC
T ss_pred cCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcc
Confidence 4444444444443 4455555555444444444443 444555555555554444444444555555555555554444
Q ss_pred CcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhccc
Q 047739 455 PASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLM 534 (1099)
Q Consensus 455 ~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 534 (1099)
|..++++++|+.|++++|++++.+|..+..+++|++|++++|++++.+|..+..+++|+.|+|++|++++.+|..|+.++
T Consensus 435 p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 514 (768)
T 3rgz_A 435 PSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLE 514 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCT
T ss_pred cHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCC
Confidence 44444455555555555555444444444445555555555555444444444455555555555555444444444455
Q ss_pred ccceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCc-----------------------------
Q 047739 535 SLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLE----------------------------- 585 (1099)
Q Consensus 535 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~----------------------------- 585 (1099)
+|++|++++|++++.+|..++.+++|+.|++++|+++|.+|..+..+..+.
T Consensus 515 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (768)
T 3rgz_A 515 NLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLL 594 (768)
T ss_dssp TCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEE
T ss_pred CCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccccccc
Confidence 555555555555444444455555555555555555444444433322211
Q ss_pred -----------------eEEecCCcccCcCCcchhccCcccEEeccCccccccCCcccCCCCCCCEEECcCccccccCCh
Q 047739 586 -----------------VLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPD 648 (1099)
Q Consensus 586 -----------------~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 648 (1099)
.++++.|.++|.+|..++.+++|+.|||++|+++|.+|..++.+++|+.|+|++|+++|.+|.
T Consensus 595 ~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~ 674 (768)
T 3rgz_A 595 EFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPD 674 (768)
T ss_dssp ECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCG
T ss_pred ccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCCh
Confidence 112222444444555566678899999999999999999999999999999999999999999
Q ss_pred hhhccCCCCeeecCCCcCCCcCCCCccccccccccccCCCCccc
Q 047739 649 SLAKLSNLAVLDLSANNLSGEIPANLSSIFGLMNFNVSSNNLQA 692 (1099)
Q Consensus 649 ~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~n~~~~ 692 (1099)
.++++++|+.|||++|+++|.+|..+..+..|+.+++++|++..
T Consensus 675 ~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g 718 (768)
T 3rgz_A 675 EVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSG 718 (768)
T ss_dssp GGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEE
T ss_pred HHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccc
Confidence 99999999999999999999999999999999999999999875
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2e-62 Score=613.95 Aligned_cols=583 Identities=22% Similarity=0.230 Sum_probs=410.5
Q ss_pred CcccceEecC-----------CcEeEEecCCCccccccccccccccccceEEccCCccCcccCcccccCCcccEEEeccc
Q 047739 56 CDWRGVACTN-----------NRVTELRLPRLQLSGRISDHLSNLRMLRKLSLRSNSFNGTIPATLAQCTLLRAVFLQYN 124 (1099)
Q Consensus 56 c~w~gv~c~~-----------~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n 124 (1099)
|.++-|.|++ .+++.|+|+++.+.+..+..++++++|++|+|++|.+++..|..++++++|++|+|++|
T Consensus 4 ~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 4 VSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred eECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 6666677764 24555555555555544445555556666666655555555555555556666666555
Q ss_pred cCCCccCcccccCCCCceeecccccCCCcccCCcc--cccceeeCCCCccCCCCCCCCcccccccccccccccccccccc
Q 047739 125 SLSGNLPANIGNLSNLEILNVAANRLSGEIANDLP--RNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPA 202 (1099)
Q Consensus 125 ~l~g~~p~~~~~l~~L~~L~ls~N~l~~~i~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~ 202 (1099)
++++..+..++++++|++|+|++|.+++..|..+. ++|++|+|++|.+++..|..++++++|++|++++|++++..+.
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 163 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 163 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHH
T ss_pred ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHH
Confidence 55543333455555566666655555544444443 4555555555555555555555555555555555555522221
Q ss_pred ccccccCccccccCceeEEEccCCcCCccChhhhcCCCCccEEEcccccCCCccCcccccccCCCCCcceEEEecccccc
Q 047739 203 TFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFT 282 (1099)
Q Consensus 203 ~~~g~lp~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n~~~ 282 (1099)
.+. ...+++|++|++++|++++..|.+|+.+++|+.|++++|++.+.........
T Consensus 164 ~~~------~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~------------------- 218 (680)
T 1ziw_A 164 ELD------IFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLE------------------- 218 (680)
T ss_dssp HHG------GGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHH-------------------
T ss_pred Hhh------ccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHH-------------------
Confidence 110 1123455555555555555555555555555555555555442211110000
Q ss_pred ccCCCCCCCCCCceeEEEcCCCccccCcchhccCCCC--ccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCc
Q 047739 283 NVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRAST--LTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPV 360 (1099)
Q Consensus 283 ~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~--L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~ 360 (1099)
-..+.|++|++++|++++..|.+|..++. |++|+|++|.+++..|..|+++++|++|+|++|++.+..|.
T Consensus 219 --------l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 290 (680)
T 1ziw_A 219 --------LANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSH 290 (680)
T ss_dssp --------HTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTT
T ss_pred --------hhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChh
Confidence 01256888899999888888888887754 99999999998888888888899999999999998888888
Q ss_pred cccCCCCCCEEEccCCcCCC-----CCCc----cccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccc--
Q 047739 361 EIKQCSSLSLLDLEGNRFSG-----EIPE----FLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGS-- 429 (1099)
Q Consensus 361 ~l~~l~~L~~L~Ls~N~l~~-----~~p~----~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-- 429 (1099)
.+..+++|++|+|++|...+ .+|. .|..+++|++|++++|.+++..+..|.++++|++|++++|.+...
T Consensus 291 ~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l 370 (680)
T 1ziw_A 291 SLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTL 370 (680)
T ss_dssp TTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEE
T ss_pred hhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhc
Confidence 88889999999998876553 2333 677888888888888888888888888888888888888875422
Q ss_pred cchhhhC--CCCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCCCcCC-CCCCCCCCCCEEEeccCcCcccCCccc
Q 047739 430 LPEEVLG--MNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIP-ASLGNLLKLTTLDLSKQNFSGELPIEL 506 (1099)
Q Consensus 430 ~~~~~~~--l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~l 506 (1099)
....+.. ..+|+.|++++|++++..|..|..+++|+.|+|++|++++.+| ..|.++++|++|++++|++.+..+..+
T Consensus 371 ~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 450 (680)
T 1ziw_A 371 TNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSF 450 (680)
T ss_dssp CTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTT
T ss_pred chhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhh
Confidence 2223333 3578888888888888888888888888888888888876555 578888888888888888888888888
Q ss_pred CCCCccceeeecccccc--CCCchhhhcccccceecccccccCCCCCCcccccceeeEEEccCCcCCCCC--------CC
Q 047739 507 AGLPNLQVIALQENKLS--GNVPEGFSSLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSI--------PP 576 (1099)
Q Consensus 507 ~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~--------p~ 576 (1099)
..+++|+.|++++|.++ +..|..|..+++|++|++++|++++..+..+..+++|+.|++++|++++.. +.
T Consensus 451 ~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 530 (680)
T 1ziw_A 451 ALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIY 530 (680)
T ss_dssp TTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCC
T ss_pred hcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcch
Confidence 88888888888888876 467788888888888888888888777778888888888888888887531 22
Q ss_pred CCCCCCCCceEEecCCcccCcCCcchhccCcccEEeccCccccccCCcccCCCCCCCEEECcCccccccCChhhh-ccCC
Q 047739 577 ELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLA-KLSN 655 (1099)
Q Consensus 577 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~-~l~~ 655 (1099)
.++++++|++|+|++|+++...+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|++++..|..+. .+++
T Consensus 531 ~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~ 610 (680)
T 1ziw_A 531 FLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRN 610 (680)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTT
T ss_pred hhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccc
Confidence 477888888888888888843334688888888888888888865555677888888888888888877777777 7888
Q ss_pred CCeeecCCCcCCCcCC
Q 047739 656 LAVLDLSANNLSGEIP 671 (1099)
Q Consensus 656 L~~L~ls~N~l~~~~p 671 (1099)
|+.|++++|++.+..+
T Consensus 611 L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 611 LTELDMRFNPFDCTCE 626 (680)
T ss_dssp CSEEECTTCCCCBCCC
T ss_pred cCEEEccCCCcccCCc
Confidence 8888888888876544
No 4
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.2e-61 Score=607.02 Aligned_cols=582 Identities=24% Similarity=0.266 Sum_probs=503.5
Q ss_pred eEEecCCCccccccccccccccccceEEccCCccCcccCcccccCCcccEEEeccccCCCccCcccccCCCCceeecccc
Q 047739 69 TELRLPRLQLSGRISDHLSNLRMLRKLSLRSNSFNGTIPATLAQCTLLRAVFLQYNSLSGNLPANIGNLSNLEILNVAAN 148 (1099)
Q Consensus 69 ~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~N 148 (1099)
+.++.++++++ .||+.+. +.+++|+|++|++++..|..++++++|++|+|++|++++..|..++++++|++|+|++|
T Consensus 7 ~~~~cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 7 EVADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp SEEECCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred CeeECCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 45788888875 4776664 78999999999999877788999999999999999999999999999999999999999
Q ss_pred cCCCcccCCcc--cccceeeCCCCccCCCCCCCCccccccccccccccccccccccccccccCccccccCceeEEEccCC
Q 047739 149 RLSGEIANDLP--RNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGN 226 (1099)
Q Consensus 149 ~l~~~i~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l~~l~~L~~L~l~~N 226 (1099)
.+++..+..+. ++|++|+|++|++++..|..|+++++|++|+|++|+++ +..|..++++++|++|++++|
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~--------~~~~~~~~~l~~L~~L~L~~n 155 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLS--------STKLGTQVQLENLQELLLSNN 155 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCS--------CCCCCSSSCCTTCCEEECCSS
T ss_pred ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCccc--------ccCchhhcccccCCEEEccCC
Confidence 99865554555 79999999999999877788999999999999999998 445566778999999999999
Q ss_pred cCCccChhhhc--CCCCccEEEcccccCCCccCcccccccCCCCCcceEEEeccccccccCCCCCCCCCCceeEEEcCCC
Q 047739 227 ALGGVIPPAIG--ALPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQN 304 (1099)
Q Consensus 227 ~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n 304 (1099)
.+++..+..++ .+++|++|++++|++++..|. .|. ....|+.|++++|
T Consensus 156 ~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~-~~~-----------------------------~l~~L~~L~l~~~ 205 (680)
T 1ziw_A 156 KIQALKSEELDIFANSSLKKLELSSNQIKEFSPG-CFH-----------------------------AIGRLFGLFLNNV 205 (680)
T ss_dssp CCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTT-GGG-----------------------------GSSEECEEECTTC
T ss_pred cccccCHHHhhccccccccEEECCCCcccccChh-hhh-----------------------------hhhhhhhhhcccc
Confidence 99988887765 568999999999999865443 222 2467899999999
Q ss_pred ccccCcchhcc---CCCCccEEeCCCCccccCchhhhCCCCC--CCEEEccCCccCccCCccccCCCCCCEEEccCCcCC
Q 047739 305 QIRGAFPLWLT---RASTLTRLDVSGNSISGKIPAQIGGLWR--LEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFS 379 (1099)
Q Consensus 305 ~l~~~~~~~~~---~l~~L~~L~Ls~N~i~~~~p~~~~~l~~--L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~ 379 (1099)
++.+.....+. ..++|++|++++|.+++..|..|.+++. |++|+|++|++++..+..|..+++|++|+|++|+++
T Consensus 206 ~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 285 (680)
T 1ziw_A 206 QLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQ 285 (680)
T ss_dssp CCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBS
T ss_pred ccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccC
Confidence 88643322221 3578999999999999999999998865 999999999999989999999999999999999999
Q ss_pred CCCCccccCCCCCCeeeccCccccc-----cCC----ccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcC
Q 047739 380 GEIPEFLGDIRGLKSLTLAANLFSG-----SIP----ASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKF 450 (1099)
Q Consensus 380 ~~~p~~~~~l~~L~~L~L~~n~l~~-----~~~----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 450 (1099)
+..|..|..+++|++|++++|...+ .+| ..|..+++|++|++++|++++..+..|.++++|++|++++|.+
T Consensus 286 ~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~ 365 (680)
T 1ziw_A 286 HLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFT 365 (680)
T ss_dssp EECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBS
T ss_pred ccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCch
Confidence 9999999999999999999886553 223 3789999999999999999998888999999999999999986
Q ss_pred cc--ccCcccCCC--CcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCC-cccCCCCccceeeeccccccCC
Q 047739 451 SG--EVPASIGNL--SQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELP-IELAGLPNLQVIALQENKLSGN 525 (1099)
Q Consensus 451 ~~--~~~~~l~~l--~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~ 525 (1099)
+. .....|..+ ++|+.|++++|++++..|..|..+++|++|++++|.+++.+| ..+.++++|+.|++++|++.+.
T Consensus 366 ~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 445 (680)
T 1ziw_A 366 SLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQL 445 (680)
T ss_dssp CCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEEC
T ss_pred hhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCccee
Confidence 42 223344433 589999999999999989999999999999999999987665 7899999999999999999988
Q ss_pred CchhhhcccccceecccccccC--CCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCC----
Q 047739 526 VPEGFSSLMSLRYLNLSFNGFV--GQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIP---- 599 (1099)
Q Consensus 526 ~p~~~~~l~~L~~L~Ls~N~l~--~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p---- 599 (1099)
.+..|..+++|++|++++|.+. +.+|..+..+++|+.|++++|++++..+..+.++++|++|+|++|++++..+
T Consensus 446 ~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 525 (680)
T 1ziw_A 446 TRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANP 525 (680)
T ss_dssp CTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTST
T ss_pred ChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhcc
Confidence 8999999999999999999987 5789999999999999999999998888889999999999999999985422
Q ss_pred ----cchhccCcccEEeccCccccccCCc-ccCCCCCCCEEECcCccccccCChhhhccCCCCeeecCCCcCCCcCCCCc
Q 047739 600 ----TDISHLSHLNVLDLSINNLTGEIPD-EISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLSGEIPANL 674 (1099)
Q Consensus 600 ----~~~~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~ 674 (1099)
..+..+++|+.|+|++|+++ .+|. .|..+++|+.|+|++|++++..+..|..+++|+.|++++|++++..|..+
T Consensus 526 ~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 604 (680)
T 1ziw_A 526 GGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVF 604 (680)
T ss_dssp TSCCCTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHH
T ss_pred CCcchhhcCCCCCCEEECCCCCCC-CCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHh
Confidence 23789999999999999999 4554 68999999999999999997767778999999999999999998777766
Q ss_pred c-ccccccccccCCCCccc
Q 047739 675 S-SIFGLMNFNVSSNNLQA 692 (1099)
Q Consensus 675 ~-~~~~l~~l~l~~n~~~~ 692 (1099)
. .+.+|+.+++++|++.|
T Consensus 605 ~~~~~~L~~l~l~~N~~~c 623 (680)
T 1ziw_A 605 GPAFRNLTELDMRFNPFDC 623 (680)
T ss_dssp HHHHTTCSEEECTTCCCCB
T ss_pred cccccccCEEEccCCCccc
Confidence 6 67889999988887764
No 5
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=6.2e-59 Score=573.88 Aligned_cols=516 Identities=20% Similarity=0.293 Sum_probs=360.6
Q ss_pred hhHHHHHHHHHhCCCC--------CCCCCCCCCCCCCCCCcc---cceEecC-CcEeEEecCCCcccccccccccccccc
Q 047739 25 PEIEALTSFKLNLHDP--------LGALNGWDSSTPAAPCDW---RGVACTN-NRVTELRLPRLQLSGRISDHLSNLRML 92 (1099)
Q Consensus 25 ~~~~~l~~~k~~~~~~--------~~~l~~w~~~~~~~~c~w---~gv~c~~-~~v~~l~l~~~~l~g~~~~~l~~l~~L 92 (1099)
.|+.||.+||+++.+| +....+|+.+ .+||.| .||+|+. +||++|+|++++++|.+|+++++|++|
T Consensus 30 ~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~--~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~L 107 (636)
T 4eco_A 30 KDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN--KELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTEL 107 (636)
T ss_dssp HHHHHHHHHHHHTTGGGCCCCC------CCCCCS--SCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCTTC
T ss_pred HHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC--CCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCccc
Confidence 5999999999998544 2345689975 458999 9999976 899999999999999999999999999
Q ss_pred ceEEccCCcc------Cc------ccCcccccCCcccEEEeccccCCCccCccccc-CCCCceeecccccCCCcccCCcc
Q 047739 93 RKLSLRSNSF------NG------TIPATLAQCTLLRAVFLQYNSLSGNLPANIGN-LSNLEILNVAANRLSGEIANDLP 159 (1099)
Q Consensus 93 ~~L~L~~n~~------~~------~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~-l~~L~~L~ls~N~l~~~i~~~~~ 159 (1099)
++|+|++|.+ .| .+|.+. +..|+ +++++|.+.+.+|..++. +..+..+++....+.. .-.
T Consensus 108 ~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~----~~~ 180 (636)
T 4eco_A 108 EVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKK----SSR 180 (636)
T ss_dssp CEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCC----CCC
T ss_pred eEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCcccccccc----ccc
Confidence 9999999987 44 566555 77888 999999999999988763 3445555555444321 111
Q ss_pred cccceeeC--CCCccCCCCCCCCccccccccccccccccccc-cccc--------cccccCcccc--ccCceeEEEccCC
Q 047739 160 RNLKYFDL--SSNGFSGPIPTSISNLSQLQLINFSFNKFSRE-VPAT--------FEGTLPSAIA--NCSSLVHLSAQGN 226 (1099)
Q Consensus 160 ~~L~~L~l--s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~-~~~~--------~~g~lp~~l~--~l~~L~~L~l~~N 226 (1099)
..++.+.+ .+|+++| +|++|+++++|++|+|++|++++. ++.. ..+.+|+.++ ++++|++|+|++|
T Consensus 181 ~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n 259 (636)
T 4eco_A 181 ITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNC 259 (636)
T ss_dssp CCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECC
T ss_pred cchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCC
Confidence 23333333 4689998 999999999999999999999841 0000 0011899999 9999999999999
Q ss_pred cCCccChhhhcCCCCccEEEccccc-CCC-ccCcccccccCCCCCcceEEEeccccccccCCCCCCCCCCceeEEEcCCC
Q 047739 227 ALGGVIPPAIGALPKLQVVSLAQNN-LSG-VVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQN 304 (1099)
Q Consensus 227 ~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n 304 (1099)
++.+.+|..|+++++|++|+|++|+ ++| .+|..+..- . ....+++|++|+|++|
T Consensus 260 ~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L-~-----------------------~~~~l~~L~~L~L~~n 315 (636)
T 4eco_A 260 PNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQAL-A-----------------------DAPVGEKIQIIYIGYN 315 (636)
T ss_dssp TTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHH-H-----------------------HSGGGGTCCEEECCSS
T ss_pred cCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhh-h-----------------------ccccCCCCCEEECCCC
Confidence 9999999999999999999999998 888 777654210 0 0011356888888888
Q ss_pred ccccCcch--hccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCC-CCEEEccCCcCCCC
Q 047739 305 QIRGAFPL--WLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSS-LSLLDLEGNRFSGE 381 (1099)
Q Consensus 305 ~l~~~~~~--~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~-L~~L~Ls~N~l~~~ 381 (1099)
+++ .+|. .|..+++|++|+|++|+++|.+| .|+++++|++|+|++|+++ .+|..+..+++ |++|+|++|+++ .
T Consensus 316 ~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~ 391 (636)
T 4eco_A 316 NLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-Y 391 (636)
T ss_dssp CCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-S
T ss_pred cCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-c
Confidence 888 5676 78888888888888888887777 7888888888888888887 67777888887 888888888887 6
Q ss_pred CCccccCCC--CCCeeeccCccccccCCccCC-------CCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCcc
Q 047739 382 IPEFLGDIR--GLKSLTLAANLFSGSIPASFR-------NLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSG 452 (1099)
Q Consensus 382 ~p~~~~~l~--~L~~L~L~~n~l~~~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 452 (1099)
+|..+..++ +|++|++++|.+++..|..|. .+++|++|+|++|+++...+..+..+++|++|+|++|+++
T Consensus 392 lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~- 470 (636)
T 4eco_A 392 IPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT- 470 (636)
T ss_dssp CCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-
T ss_pred cchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-
Confidence 777766554 677777777777777777776 6667777777777777333333445677777777777776
Q ss_pred ccCcc-cCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccC--CCCccceeeeccccccCCCchh
Q 047739 453 EVPAS-IGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELA--GLPNLQVIALQENKLSGNVPEG 529 (1099)
Q Consensus 453 ~~~~~-l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~--~l~~L~~L~L~~N~l~~~~p~~ 529 (1099)
.+|.. +.... ..+.++++|++|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..
T Consensus 471 ~i~~~~~~~~~-----------------~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~ 531 (636)
T 4eco_A 471 EIPKNSLKDEN-----------------ENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQ 531 (636)
T ss_dssp BCCSSSSEETT-----------------EECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCG
T ss_pred CcCHHHhcccc-----------------ccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChh
Confidence 33332 22111 01122335666666666666 4555554 66666666666666664 5666
Q ss_pred hhcccccceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccCccc
Q 047739 530 FSSLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLN 609 (1099)
Q Consensus 530 ~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 609 (1099)
+..+++|++|+|++|+ ++++|++.+.+|..++++++|++|+|++|++ +.+|..+. ++|+
T Consensus 532 ~~~l~~L~~L~Ls~N~------------------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~ 590 (636)
T 4eco_A 532 PLNSSTLKGFGIRNQR------------------DAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNIS 590 (636)
T ss_dssp GGGCSSCCEEECCSCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCC
T ss_pred hhcCCCCCEEECCCCc------------------ccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCC
Confidence 6666667777665554 2344555555555555555555555555555 24554443 4555
Q ss_pred EEeccCcccc
Q 047739 610 VLDLSINNLT 619 (1099)
Q Consensus 610 ~L~Ls~N~l~ 619 (1099)
.|||++|++.
T Consensus 591 ~L~Ls~N~l~ 600 (636)
T 4eco_A 591 VLDIKDNPNI 600 (636)
T ss_dssp EEECCSCTTC
T ss_pred EEECcCCCCc
Confidence 5555555444
No 6
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=4.5e-58 Score=573.75 Aligned_cols=500 Identities=20% Similarity=0.253 Sum_probs=293.7
Q ss_pred ChhhHHHHHHHHHhCCCCCCCCCCCCCCC---CCCC--Ccc------------cceEecC-CcEeEEecCCCcccccccc
Q 047739 23 RSPEIEALTSFKLNLHDPLGALNGWDSST---PAAP--CDW------------RGVACTN-NRVTELRLPRLQLSGRISD 84 (1099)
Q Consensus 23 ~~~~~~~l~~~k~~~~~~~~~l~~w~~~~---~~~~--c~w------------~gv~c~~-~~v~~l~l~~~~l~g~~~~ 84 (1099)
..+|+.||++||+++.|| +|+.++ ..+| |.| .||+|+. +||++|+|+++++.|.+|+
T Consensus 267 ~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip~ 341 (876)
T 4ecn_A 267 YIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPD 341 (876)
T ss_dssp HHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEECG
T ss_pred chHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCch
Confidence 346999999999999887 898765 2345 999 9999985 9999999999999999999
Q ss_pred ccccccccceEEc-cCCccCcccCccccc---------------------------------------------------
Q 047739 85 HLSNLRMLRKLSL-RSNSFNGTIPATLAQ--------------------------------------------------- 112 (1099)
Q Consensus 85 ~l~~l~~L~~L~L-~~n~~~~~~p~~~~~--------------------------------------------------- 112 (1099)
++++|++|++||| ++|.++|..|-....
T Consensus 342 ~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~ 421 (876)
T 4ecn_A 342 AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDS 421 (876)
T ss_dssp GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCC
T ss_pred HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccccc
Confidence 9999999999999 999998875533111
Q ss_pred CCcccEEEec--cccCCCccCcccccCCCCceeecccccCCC-cccCCcccccceeeCCCCccCCCCCCCCc--cccccc
Q 047739 113 CTLLRAVFLQ--YNSLSGNLPANIGNLSNLEILNVAANRLSG-EIANDLPRNLKYFDLSSNGFSGPIPTSIS--NLSQLQ 187 (1099)
Q Consensus 113 l~~L~~L~l~--~n~l~g~~p~~~~~l~~L~~L~ls~N~l~~-~i~~~~~~~L~~L~ls~N~l~~~~p~~~~--~l~~L~ 187 (1099)
...++.+.+. .|+++| ||..++++++|++|+|++|.++| .+|..+. .++.|.++|.+|..++ ++++|+
T Consensus 422 ~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~------~~s~n~~~g~iP~~l~f~~L~~L~ 494 (876)
T 4ecn_A 422 RISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWE------DANSDYAKQYENEELSWSNLKDLT 494 (876)
T ss_dssp CCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCS------CTTSHHHHHHTTSCCCGGGCTTCC
T ss_pred ccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCccccccc------ccccccccccCChhhhhccCCCCC
Confidence 1122222332 266666 66666666666666666666665 2332211 1222444444555544 555555
Q ss_pred cccccccccccccccccccccCccccccCceeEEEccCCc-CCc-cChhhhcCCCCccEEEcccccCCCccCcccccccC
Q 047739 188 LINFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNA-LGG-VIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVS 265 (1099)
Q Consensus 188 ~L~ls~N~l~~~~~~~~~g~lp~~l~~l~~L~~L~l~~N~-l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 265 (1099)
+|+|++|++. |.+|..++++++|++|+|++|+ +++ .+|..++.++.
T Consensus 495 ~L~Ls~N~l~--------~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~------------------------ 542 (876)
T 4ecn_A 495 DVELYNCPNM--------TQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLAD------------------------ 542 (876)
T ss_dssp EEEEESCTTC--------CSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHH------------------------
T ss_pred EEECcCCCCC--------ccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhh------------------------
Confidence 5555555544 3444444444444444444444 444 34443332220
Q ss_pred CCCCcceEEEeccccccccCCCCCCCCCCceeEEEcCCCccccCcch--hccCCCCccEEeCCCCccccCchhhhCCCCC
Q 047739 266 GYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPL--WLTRASTLTRLDVSGNSISGKIPAQIGGLWR 343 (1099)
Q Consensus 266 ~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~--~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~ 343 (1099)
....+++|++|+|++|+++ .+|. .|..+++|++|+|++|.++ .+| .|+++++
T Consensus 543 -----------------------~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~ 596 (876)
T 4ecn_A 543 -----------------------DEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVK 596 (876)
T ss_dssp -----------------------CTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSE
T ss_pred -----------------------cccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCc
Confidence 0011344566666666666 4555 6677777777777777776 566 6777777
Q ss_pred CCEEEccCCccCccCCccccCCCC-CCEEEccCCcCCCCCCccccCCCC--CCeeeccCccccccCCccC---C--CCCC
Q 047739 344 LEELKMANNSFGGAVPVEIKQCSS-LSLLDLEGNRFSGEIPEFLGDIRG--LKSLTLAANLFSGSIPASF---R--NLPG 415 (1099)
Q Consensus 344 L~~L~L~~n~l~~~~~~~l~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~L~~n~l~~~~~~~~---~--~l~~ 415 (1099)
|++|+|++|+++ .+|..+..+++ |++|+|++|+++ .+|..+..++. |+.|+|++|++.+.+|... . .+++
T Consensus 597 L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~ 674 (876)
T 4ecn_A 597 LTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGIN 674 (876)
T ss_dssp ESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCC
T ss_pred ceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCC
Confidence 777777777776 66666777776 777777777776 66666655543 6677777776665544322 2 2346
Q ss_pred CCEEEcccCcCccccchhh-hCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEec
Q 047739 416 LENLNLRHNSLSGSLPEEV-LGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLS 494 (1099)
Q Consensus 416 L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 494 (1099)
|+.|+|++|+++ .+|..+ ..+++|+.|+|++|+++ .+|..+.... +..+.++++|+.|+|+
T Consensus 675 L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~----------------~~~l~nl~~L~~L~Ls 736 (876)
T 4ecn_A 675 ASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPK----------------DGNYKNTYLLTTIDLR 736 (876)
T ss_dssp EEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCT----------------TSCCTTGGGCCEEECC
T ss_pred cCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccc----------------cccccccCCccEEECC
Confidence 777777777777 444444 36777777777777776 3443322111 0012233355555555
Q ss_pred cCcCcccCCcccC--CCCccceeeeccccccCCCchhhhcccccceecccc------cccCCCCCCcccccceeeEEEcc
Q 047739 495 KQNFSGELPIELA--GLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSF------NGFVGQIPATFSFLRSVVVLSFS 566 (1099)
Q Consensus 495 ~n~l~~~~~~~l~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~------N~l~~~~~~~l~~l~~L~~L~ls 566 (1099)
+|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++ |.+.+.+|..+..+++|+.|+|+
T Consensus 737 ~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls 814 (876)
T 4ecn_A 737 FNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIG 814 (876)
T ss_dssp SSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECC
T ss_pred CCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECC
Confidence 55555 4455554 55556666666666554 455555666666666655 44444444444444444444444
Q ss_pred CCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccCcccEEeccCcc
Q 047739 567 GNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINN 617 (1099)
Q Consensus 567 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 617 (1099)
+|++ +.+|..+. ++|+.|+|++|++....+..+.....+..+.|++|.
T Consensus 815 ~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~ 862 (876)
T 4ecn_A 815 SNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDK 862 (876)
T ss_dssp SSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCT
T ss_pred CCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCC
Confidence 4444 34444433 344444444444443333333333334444444443
No 7
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=8e-57 Score=555.56 Aligned_cols=522 Identities=23% Similarity=0.246 Sum_probs=357.3
Q ss_pred cccccccccccceEEccCCccCcccCcccccCCcccEEEeccccCCCccCcccccCCCCceeecccccCCCcccCCcc--
Q 047739 82 ISDHLSNLRMLRKLSLRSNSFNGTIPATLAQCTLLRAVFLQYNSLSGNLPANIGNLSNLEILNVAANRLSGEIANDLP-- 159 (1099)
Q Consensus 82 ~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~N~l~~~i~~~~~-- 159 (1099)
+|..+.. .+++|+|++|.+++..|..++++++|++|+|++|++++..|..++++++|++|+|++|.+++..|..+.
T Consensus 27 iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 104 (606)
T 3t6q_A 27 IPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGP 104 (606)
T ss_dssp CCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSC
T ss_pred CcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhccc
Confidence 4444432 689999999999988899999999999999999999998899999999999999999999988787775
Q ss_pred cccceeeCCCCccCCCCCCCCccccccccccccccccccccccccccccCccccccCceeEEEccCCcCCccChhhhcCC
Q 047739 160 RNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAIGAL 239 (1099)
Q Consensus 160 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l 239 (1099)
++|++|++++|++++..|..++++++|++|++++|++++. .+|... .+++|++|++++|.+++..|..|+.+
T Consensus 105 ~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~-------~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l 176 (606)
T 3t6q_A 105 KALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSI-------KLPKGF-PTEKLKVLDFQNNAIHYLSKEDMSSL 176 (606)
T ss_dssp TTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCC-------CCCTTC-CCTTCCEEECCSSCCCEECHHHHHTT
T ss_pred ccccEeeccccCcccCCcchhccCCcccEEECCCCccccc-------Cccccc-CCcccCEEEcccCcccccChhhhhhh
Confidence 7899999999999877778889999999999999998842 223333 38889999999999998888889999
Q ss_pred CCcc--EEEcccccCCCccCcccccccCCCCCcceEEEeccccccccCCCCCCCCCCceeEEEcCCCccccCcchhccCC
Q 047739 240 PKLQ--VVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRA 317 (1099)
Q Consensus 240 ~~L~--~L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l 317 (1099)
++|+ .|++++|++++..|.. |. ...|++|++++|. ..+..+..+
T Consensus 177 ~~L~~l~L~l~~n~l~~~~~~~-~~------------------------------~~~L~~L~l~~~~---~~~~~~~~l 222 (606)
T 3t6q_A 177 QQATNLSLNLNGNDIAGIEPGA-FD------------------------------SAVFQSLNFGGTQ---NLLVIFKGL 222 (606)
T ss_dssp TTCCSEEEECTTCCCCEECTTT-TT------------------------------TCEEEEEECTTCS---CHHHHHHHT
T ss_pred cccceeEEecCCCccCccChhH-hh------------------------------hccccccccCCch---hHHHHhhhc
Confidence 9888 8888888887544331 21 2357777777776 234445555
Q ss_pred CCccEEeCCCCcccc-----CchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCC
Q 047739 318 STLTRLDVSGNSISG-----KIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGL 392 (1099)
Q Consensus 318 ~~L~~L~Ls~N~i~~-----~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 392 (1099)
.++....+..+.+.+ ..+..|.++. . .+|+.|++++|++++..+..|..+++|
T Consensus 223 ~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~---------------------~-~~L~~L~l~~n~l~~~~~~~~~~l~~L 280 (606)
T 3t6q_A 223 KNSTIQSLWLGTFEDMDDEDISPAVFEGLC---------------------E-MSVESINLQKHYFFNISSNTFHCFSGL 280 (606)
T ss_dssp TTCEEEEEECCCCTTSCCCCCCGGGGGGGG---------------------G-SEEEEEECTTCCCSSCCTTTTTTCTTC
T ss_pred cccchhheechhhccccccccChhHhchhh---------------------c-CceeEEEeecCccCccCHHHhccccCC
Confidence 554444433322221 1111222221 1 145555555555554444445555555
Q ss_pred CeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCc-ccCCCCcccEEEccC
Q 047739 393 KSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPA-SIGNLSQLMVFNLSG 471 (1099)
Q Consensus 393 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~l~~l~~L~~L~L~~ 471 (1099)
++|++++|.++ .+|..+.++++|++|++++|++++..|..+..+++|++|++++|.+.+.++. .+.++++|++|++++
T Consensus 281 ~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~ 359 (606)
T 3t6q_A 281 QELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSH 359 (606)
T ss_dssp SEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCS
T ss_pred CEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCC
Confidence 55555555554 3444555556666666666666555555556666666666666655543333 355666666666666
Q ss_pred CcCCCcC--CCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCch-hhhcccccceecccccccCC
Q 047739 472 NAFSGRI--PASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPE-GFSSLMSLRYLNLSFNGFVG 548 (1099)
Q Consensus 472 N~l~~~~--~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~ 548 (1099)
|.+++.. +..+.++++|++|++++|++.+..|..+..+++|+.|++++|++++..+. .|..+++|++|++++|.+.+
T Consensus 360 n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~ 439 (606)
T 3t6q_A 360 DDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDI 439 (606)
T ss_dssp SCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBT
T ss_pred CccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCC
Confidence 6665443 45566666666666666666656566666666666666666666654433 35666666666666666666
Q ss_pred CCCCcccccceeeEEEccCCcCCC---CCCCCCCCCCCCceEEecCCcccCcCCcchhccCcccEEeccCccccccCCcc
Q 047739 549 QIPATFSFLRSVVVLSFSGNHISG---SIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDE 625 (1099)
Q Consensus 549 ~~~~~l~~l~~L~~L~ls~N~l~~---~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 625 (1099)
..|..+..+++|+.|++++|++++ ..+..+..+++|++|+|++|++++..|..++.+++|+.|+|++|++++..|..
T Consensus 440 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 519 (606)
T 3t6q_A 440 SSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEA 519 (606)
T ss_dssp TCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGG
T ss_pred cCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhH
Confidence 666666666666666666666654 22345677778888888888887777777777888888888888887777777
Q ss_pred cCCCCCCCEEECcCccccccCChhhhccCCCCeeecCCCcCCCcCC
Q 047739 626 ISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLSGEIP 671 (1099)
Q Consensus 626 l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p 671 (1099)
+..+++| .|+|++|++++.+|..+..+++|+.|++++|++++..+
T Consensus 520 l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 520 LSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp GTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred hCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 8888888 88888888887777777888888888888888776443
No 8
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.9e-56 Score=552.24 Aligned_cols=530 Identities=22% Similarity=0.290 Sum_probs=410.6
Q ss_pred eeecccccCCCcccCCcccccceeeCCCCccCCCCCCCCccccccccccccccccccccccccccccCccccccCceeEE
Q 047739 142 ILNVAANRLSGEIANDLPRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSLVHL 221 (1099)
Q Consensus 142 ~L~ls~N~l~~~i~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l~~l~~L~~L 221 (1099)
.++.++..++ .+|..+++++++|+|++|+|++..|..|+++++|++|+|++|++++ ..|..++.+++|++|
T Consensus 16 ~~~c~~~~l~-~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~--------~~~~~~~~l~~L~~L 86 (606)
T 3t6q_A 16 TYNCENLGLN-EIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYW--------IHEDTFQSQHRLDTL 86 (606)
T ss_dssp EEECTTSCCS-SCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCE--------ECTTTTTTCTTCCEE
T ss_pred eEECCCCCcc-cCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccce--------eChhhccCccccCee
Confidence 4444555554 4666666667777777777776666677777777777777777662 334445566677777
Q ss_pred EccCCcCCccChhhhcCCCCccEEEcccccCCCccCcccccccCCCCCcceEEEeccccccccCCCCCCCCCCceeEEEc
Q 047739 222 SAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDL 301 (1099)
Q Consensus 222 ~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L 301 (1099)
+|++|++++..|.+|+.+++|++|+|++|++++..|. .|.. .++|+.|++++|.+..++.+.... +++|++|+|
T Consensus 87 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~-~~~~----l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L 160 (606)
T 3t6q_A 87 VLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFI-PLHN----QKTLESLYLGSNHISSIKLPKGFP-TEKLKVLDF 160 (606)
T ss_dssp ECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGS-CCTT----CTTCCEEECCSSCCCCCCCCTTCC-CTTCCEEEC
T ss_pred eCCCCcccccChhhhcccccccEeeccccCcccCCcc-hhcc----CCcccEEECCCCcccccCcccccC-CcccCEEEc
Confidence 7777777766677777777777777777777642222 1221 233444444444444433332222 556677777
Q ss_pred CCCccccCcchhccCCCCcc--EEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCC
Q 047739 302 QQNQIRGAFPLWLTRASTLT--RLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFS 379 (1099)
Q Consensus 302 ~~n~l~~~~~~~~~~l~~L~--~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~ 379 (1099)
++|++++..|..|..+++|+ +|++++|.+++..|..|.. .+|++|++++|. ..+..+..+.++....+..+.+.
T Consensus 161 ~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~ 236 (606)
T 3t6q_A 161 QNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFE 236 (606)
T ss_dssp CSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCT
T ss_pred ccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCch---hHHHHhhhccccchhheechhhc
Confidence 77777666666666666666 6677777776655555443 466677776665 12333334444333333222221
Q ss_pred -----CCCCccccCCC--CCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCcc
Q 047739 380 -----GEIPEFLGDIR--GLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSG 452 (1099)
Q Consensus 380 -----~~~p~~~~~l~--~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 452 (1099)
...+..+..+. +|+.|++++|.+++..+..|.++++|++|++++|+++ .+|..+.++++|++|++++|.+++
T Consensus 237 ~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~ 315 (606)
T 3t6q_A 237 DMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFEN 315 (606)
T ss_dssp TSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSB
T ss_pred cccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCc
Confidence 12233344443 7999999999999999999999999999999999999 788899999999999999999998
Q ss_pred ccCcccCCCCcccEEEccCCcCCCcCCC-CCCCCCCCCEEEeccCcCcccC--CcccCCCCccceeeeccccccCCCchh
Q 047739 453 EVPASIGNLSQLMVFNLSGNAFSGRIPA-SLGNLLKLTTLDLSKQNFSGEL--PIELAGLPNLQVIALQENKLSGNVPEG 529 (1099)
Q Consensus 453 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~-~l~~l~~L~~L~L~~n~l~~~~--~~~l~~l~~L~~L~L~~N~l~~~~p~~ 529 (1099)
..|..+.++++|+.|++++|.+.+.++. .+.++++|++|++++|++++.. +..+..+++|+.|++++|++++..|..
T Consensus 316 ~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 395 (606)
T 3t6q_A 316 LCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEA 395 (606)
T ss_dssp GGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTT
T ss_pred CchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHH
Confidence 8899999999999999999999866655 5999999999999999999766 788999999999999999999888999
Q ss_pred hhcccccceecccccccCCCCCC-cccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCc---CCcchhcc
Q 047739 530 FSSLMSLRYLNLSFNGFVGQIPA-TFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGH---IPTDISHL 605 (1099)
Q Consensus 530 ~~~l~~L~~L~Ls~N~l~~~~~~-~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~---~p~~~~~l 605 (1099)
|..+++|++|++++|++.+..+. .+..+++|+.|++++|++++..|..++.+++|++|+|++|++++. .+..+..+
T Consensus 396 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l 475 (606)
T 3t6q_A 396 FKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTL 475 (606)
T ss_dssp TTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGC
T ss_pred hcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccC
Confidence 99999999999999999987665 489999999999999999999999999999999999999999862 33679999
Q ss_pred CcccEEeccCccccccCCcccCCCCCCCEEECcCccccccCChhhhccCCCCeeecCCCcCCCcCCCCcccccccccccc
Q 047739 606 SHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLSGEIPANLSSIFGLMNFNV 685 (1099)
Q Consensus 606 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l 685 (1099)
++|+.|++++|++++..|..++.+++|+.|+|++|++++..|..+.++++| .|++++|++++..|..+..+.+|+.+++
T Consensus 476 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l 554 (606)
T 3t6q_A 476 GRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINL 554 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEEC
T ss_pred CCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeC
Confidence 999999999999998889999999999999999999999999999999999 9999999999988888899999999999
Q ss_pred CCCCccc
Q 047739 686 SSNNLQA 692 (1099)
Q Consensus 686 ~~n~~~~ 692 (1099)
++|++.|
T Consensus 555 ~~N~~~c 561 (606)
T 3t6q_A 555 RQNPLDC 561 (606)
T ss_dssp TTCCEEC
T ss_pred CCCCccc
Confidence 8887763
No 9
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=5.5e-56 Score=566.32 Aligned_cols=510 Identities=23% Similarity=0.232 Sum_probs=357.6
Q ss_pred ccccceEEccCCccCcccCcccccCCcccEEEeccccCCCcc-CcccccCCCCceeecccccCCCcccCCcccccceeeC
Q 047739 89 LRMLRKLSLRSNSFNGTIPATLAQCTLLRAVFLQYNSLSGNL-PANIGNLSNLEILNVAANRLSGEIANDLPRNLKYFDL 167 (1099)
Q Consensus 89 l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~g~~-p~~~~~l~~L~~L~ls~N~l~~~i~~~~~~~L~~L~l 167 (1099)
.+.|+.|||++|.+++..|..++++++|++|||++|.+.+.| |..++++++|++|+|
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~L---------------------- 80 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDL---------------------- 80 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEEC----------------------
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEEC----------------------
Confidence 456667777777766666666666777777777666665555 445666666555555
Q ss_pred CCCccCCCCCCCCccccccccccccccccccccccccccccCcc--ccccCceeEEEccCCcCCccCh-hhhcCCCCccE
Q 047739 168 SSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSA--IANCSSLVHLSAQGNALGGVIP-PAIGALPKLQV 244 (1099)
Q Consensus 168 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~--l~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~ 244 (1099)
++|.+++..|.+|+++++|++|+|++|+++ +.+|.. ++++++|++|+|++|.+++..+ ..|+++++|++
T Consensus 81 s~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~--------~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~ 152 (844)
T 3j0a_A 81 GSSKIYFLHPDAFQGLFHLFELRLYFCGLS--------DAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKS 152 (844)
T ss_dssp TTCCCCEECTTSSCSCSSCCCEECTTCCCS--------SCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCE
T ss_pred CCCcCcccCHhHccCCcccCEeeCcCCCCC--------cccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCE
Confidence 455555567889999999999999999998 344444 7889999999999999998765 68999999999
Q ss_pred EEcccccCCCccCcccccccCCCCCcceEEEeccccccccCCCCCCCCCCceeEEEcCCCccccCcchhccCCCC-----
Q 047739 245 VSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRAST----- 319 (1099)
Q Consensus 245 L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~----- 319 (1099)
|+|++|.+++..|..+ ..+ ..++|+.|+|++|.+.+..|..+..+.+
T Consensus 153 L~Ls~N~i~~~~~~~l-~~l---------------------------~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~ 204 (844)
T 3j0a_A 153 IDFSSNQIFLVCEHEL-EPL---------------------------QGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNM 204 (844)
T ss_dssp EEEESSCCCCCCSGGG-HHH---------------------------HHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTC
T ss_pred EECCCCcCCeeCHHHc-ccc---------------------------cCCccceEECCCCccccccccchhhcCCccccC
Confidence 9999999986655432 110 0146889999999999888877766665
Q ss_pred -ccEEeCCCCccccCchhhhCCC---CCCCEEEccCCcc---------CccCCccccCC--CCCCEEEccCCcCCCCCCc
Q 047739 320 -LTRLDVSGNSISGKIPAQIGGL---WRLEELKMANNSF---------GGAVPVEIKQC--SSLSLLDLEGNRFSGEIPE 384 (1099)
Q Consensus 320 -L~~L~Ls~N~i~~~~p~~~~~l---~~L~~L~L~~n~l---------~~~~~~~l~~l--~~L~~L~Ls~N~l~~~~p~ 384 (1099)
|++|+|++|.+++..+..+... .+++.|.++++.+ .+.....|..+ ++|++|+|++|.+.+..|.
T Consensus 205 ~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~ 284 (844)
T 3j0a_A 205 VLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSR 284 (844)
T ss_dssp CBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSC
T ss_pred ceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChh
Confidence 9999999999988888777643 6788888874433 22233334443 5677777777777777777
Q ss_pred cccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcc
Q 047739 385 FLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQL 464 (1099)
Q Consensus 385 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L 464 (1099)
.|..+++|+.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|+.|++++|.+++..+..|.++++|
T Consensus 285 ~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 364 (844)
T 3j0a_A 285 VFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKL 364 (844)
T ss_dssp CSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCC
T ss_pred hhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCC
Confidence 77777777777777777777777777777777777777777776667777777777777777777776666677777777
Q ss_pred cEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCC-chhhhcccccceecccc
Q 047739 465 MVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNV-PEGFSSLMSLRYLNLSF 543 (1099)
Q Consensus 465 ~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~ 543 (1099)
+.|+|++|.+++. ..+++|+.|++++|+++ .+|.. ..+++.|++++|++++.. +..+..+++|++|+|++
T Consensus 365 ~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~ 435 (844)
T 3j0a_A 365 QTLDLRDNALTTI-----HFIPSIPDIFLSGNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQ 435 (844)
T ss_dssp CEEEEETCCSCCC-----SSCCSCSEEEEESCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEES
T ss_pred CEEECCCCCCCcc-----cCCCCcchhccCCCCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCC
Confidence 7777777777632 22667777777777776 33432 356677777777776532 22344667777777777
Q ss_pred cccCCCCCC-cccccceeeEEEccCCcCC-----CCCCCCCCCCCCCceEEecCCcccCcCCcchhccCcccEEeccCcc
Q 047739 544 NGFVGQIPA-TFSFLRSVVVLSFSGNHIS-----GSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINN 617 (1099)
Q Consensus 544 N~l~~~~~~-~l~~l~~L~~L~ls~N~l~-----~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 617 (1099)
|++++..+. .+..+++|+.|++++|.++ +..+..|.++++|+.|+|++|++++..|..+..+++|+.|+|++|+
T Consensus 436 N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 515 (844)
T 3j0a_A 436 NRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNR 515 (844)
T ss_dssp CCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCC
T ss_pred CcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCC
Confidence 777654332 3445667777777777765 3334556667777777777777776666666777777777777777
Q ss_pred ccccCCcccCCCCCCCEEECcCccccccCChhhhccCCCCeeecCCCcCCCcC
Q 047739 618 LTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLSGEI 670 (1099)
Q Consensus 618 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~ 670 (1099)
|++..|..+. ++|+.|+|++|+|++.+|..+ .+|+.|++++|++.+..
T Consensus 516 l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~Np~~C~c 563 (844)
T 3j0a_A 516 LTVLSHNDLP--ANLEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICEC 563 (844)
T ss_dssp CSSCCCCCCC--SCCCEEEEEEECCCCCCSCCC---SSCCEEEEEEECCCCSS
T ss_pred CCccChhhhh--ccccEEECCCCcCCCCChhHh---CCcCEEEecCCCccccc
Confidence 7654444443 667777777777776666554 35666777777766543
No 10
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=4.1e-56 Score=549.17 Aligned_cols=518 Identities=20% Similarity=0.195 Sum_probs=342.8
Q ss_pred cccceEEccCCccCcccCcccccCCcccEEEeccccCCCccCcccccCCCCceeecccccCCCcccCCcc--cccceeeC
Q 047739 90 RMLRKLSLRSNSFNGTIPATLAQCTLLRAVFLQYNSLSGNLPANIGNLSNLEILNVAANRLSGEIANDLP--RNLKYFDL 167 (1099)
Q Consensus 90 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~N~l~~~i~~~~~--~~L~~L~l 167 (1099)
+.|++|+|++|++++..|..++++++|++|+|++|++++..|..++++++|++|+|++|.+++..|..+. ++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 7889999999999988888899999999999999999988888899999999998888888876666654 56777777
Q ss_pred CCCccCCCCCCCCccccccccccccccccccccccccccccCccccccCceeEEEccCCcCCccChhhhcCCCCcc----
Q 047739 168 SSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAIGALPKLQ---- 243 (1099)
Q Consensus 168 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~---- 243 (1099)
++|++++..|..++++++|++|++++|++++ ..+|..++++++|++|++++|++++..|..|+.+++|+
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-------~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~ 184 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHS-------CKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNL 184 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCC-------CCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccc-------eechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccc
Confidence 7777766665667777777777777777652 24566666667777777777777666666665555443
Q ss_pred EEEcccccCCCccCcccccccCCCCCcceEEEeccccccccCCCCCCCCCCceeEEEcCCCccc-cCcchhccCCCCccE
Q 047739 244 VVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIR-GAFPLWLTRASTLTR 322 (1099)
Q Consensus 244 ~L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~ 322 (1099)
+|++++|++++ +|...|. ..+|++|++++|.++ +.+|.++..++.|+.
T Consensus 185 ~L~l~~n~l~~-~~~~~~~------------------------------~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~ 233 (606)
T 3vq2_A 185 SLDMSLNPIDF-IQDQAFQ------------------------------GIKLHELTLRGNFNSSNIMKTCLQNLAGLHV 233 (606)
T ss_dssp EEECTTCCCCE-ECTTTTT------------------------------TCEEEEEEEESCCSCHHHHHHHHHTTTTCEE
T ss_pred eeeccCCCcce-eCccccc------------------------------CceeeeeeccCCccchhHHHHHhcccccccc
Confidence 56666666652 2222221 124666666666665 345556666666666
Q ss_pred EeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEc-cCCcCCCCCCccccCCCCCCeeeccCcc
Q 047739 323 LDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDL-EGNRFSGEIPEFLGDIRGLKSLTLAANL 401 (1099)
Q Consensus 323 L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L-s~N~l~~~~p~~~~~l~~L~~L~L~~n~ 401 (1099)
+++..+.+.+.. .+.. +....+..+..+ +++.+++ ..|.+.+.+|. +..+++|+.|++++|.
T Consensus 234 l~l~~~~~~~~~--------~l~~-------~~~~~~~~l~~l-~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~ 296 (606)
T 3vq2_A 234 HRLILGEFKDER--------NLEI-------FEPSIMEGLCDV-TIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVS 296 (606)
T ss_dssp EEEEEECCTTSC--------CCSC-------CCGGGGTTGGGS-EEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCC
T ss_pred ccccccccccCC--------cccc-------cChHHhhhhhhc-cHhheeccccccccccccc-cccCCCCCEEEecCcc
Confidence 666544333110 0000 000011111111 3444455 44555555554 5555556666666555
Q ss_pred ccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCCCc--CC
Q 047739 402 FSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGR--IP 479 (1099)
Q Consensus 402 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~--~~ 479 (1099)
+.. +| .+..+++|++|++++|++ +.+| .+ .+++|+.|++++|...+.. .+..+++|+.|++++|++++. .+
T Consensus 297 ~~~-l~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~ 369 (606)
T 3vq2_A 297 IKY-LE-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCS 369 (606)
T ss_dssp CCC-CC-CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECC
T ss_pred chh-hh-hccccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchh
Confidence 543 22 555566666666666666 3455 33 6666666666666443222 455666666666666666644 25
Q ss_pred CCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCc-hhhhcccccceecccccccCCCCCCcccccc
Q 047739 480 ASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVP-EGFSSLMSLRYLNLSFNGFVGQIPATFSFLR 558 (1099)
Q Consensus 480 ~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~ 558 (1099)
..+..+++|++|++++|.+++ +|..+..+++|+.|++++|++.+..| ..|..+++|++|++++|.+++..|..+..++
T Consensus 370 ~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 448 (606)
T 3vq2_A 370 YSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLT 448 (606)
T ss_dssp HHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCT
T ss_pred hhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCC
Confidence 556666667777777666663 44666667777777777777766655 5667777777777777777777777777777
Q ss_pred eeeEEEccCCcCCC-CCCCCCCCCCCCceEEecCCcccCcCCcchhccCcccEEeccCccccccCCcccCCCCCCCEEEC
Q 047739 559 SVVVLSFSGNHISG-SIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSLRSLLV 637 (1099)
Q Consensus 559 ~L~~L~ls~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 637 (1099)
+|+.|++++|++++ .+|..++.+++|++|+|++|++++..|..++.+++|+.|+|++|++++.+|..+..+++|+.|+|
T Consensus 449 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 528 (606)
T 3vq2_A 449 SLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDC 528 (606)
T ss_dssp TCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEEC
Confidence 77777777777776 36777778888888888888888777777888888888888888888777778888888888888
Q ss_pred cCccccccCChhhhccC-CCCeeecCCCcCCCcCC
Q 047739 638 NSNHLSGGIPDSLAKLS-NLAVLDLSANNLSGEIP 671 (1099)
Q Consensus 638 s~N~l~~~~p~~l~~l~-~L~~L~ls~N~l~~~~p 671 (1099)
++|+++ .+|..+..++ +|+.|++++|++.+..+
T Consensus 529 ~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 529 SFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp TTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred CCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 888887 6676677776 58888888888876544
No 11
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=3.9e-55 Score=558.49 Aligned_cols=526 Identities=22% Similarity=0.228 Sum_probs=389.7
Q ss_pred CcccceEecCCcEeEEecCCCccccccccccccccccceEEccCCccCccc-CcccccCCcccEEEeccccCCCccCccc
Q 047739 56 CDWRGVACTNNRVTELRLPRLQLSGRISDHLSNLRMLRKLSLRSNSFNGTI-PATLAQCTLLRAVFLQYNSLSGNLPANI 134 (1099)
Q Consensus 56 c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~-p~~~~~l~~L~~L~l~~n~l~g~~p~~~ 134 (1099)
|.|..|-+-..+++.|+|+++.+++..+..+++|++|++|||++|.+.+.+ |..++++++|++|+|++|++++..|..+
T Consensus 14 ~~L~~vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~ 93 (844)
T 3j0a_A 14 CNLTQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAF 93 (844)
T ss_dssp CCSSCCCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSS
T ss_pred CCCCCCCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHc
Confidence 678888884478999999999999988999999999999999999888888 7889999999999999999999999999
Q ss_pred ccCCCCceeecccccCCCcccCC--cc--cccceeeCCCCccCCCCC-CCCccccccccccccccccccccccccccccC
Q 047739 135 GNLSNLEILNVAANRLSGEIAND--LP--RNLKYFDLSSNGFSGPIP-TSISNLSQLQLINFSFNKFSREVPATFEGTLP 209 (1099)
Q Consensus 135 ~~l~~L~~L~ls~N~l~~~i~~~--~~--~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp 209 (1099)
+++++|++|+|++|.+++.+|.. +. ++|++|+|++|.+++..+ ..|+++++|++|+|++|+++ +..|
T Consensus 94 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~--------~~~~ 165 (844)
T 3j0a_A 94 QGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIF--------LVCE 165 (844)
T ss_dssp CSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCC--------CCCS
T ss_pred cCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCC--------eeCH
Confidence 99999999999999999877654 33 678888888888876654 46778888888888888777 3344
Q ss_pred cccccc--CceeEEEccCCcCCccChhhhcCCCC------ccEEEcccccCCCccCcccccccCCCCCcceEEEeccccc
Q 047739 210 SAIANC--SSLVHLSAQGNALGGVIPPAIGALPK------LQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAF 281 (1099)
Q Consensus 210 ~~l~~l--~~L~~L~l~~N~l~~~~p~~~~~l~~------L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n~~ 281 (1099)
..++.+ ++|+.|++++|.+.+..|..++.+++ |++|+|++|++++.+|..+.....
T Consensus 166 ~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~---------------- 229 (844)
T 3j0a_A 166 HELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAIS---------------- 229 (844)
T ss_dssp GGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSC----------------
T ss_pred HHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcC----------------
Confidence 555555 67778888888877777766665554 777777777777666554332211
Q ss_pred cccCCCCCCCCCCceeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhhhCCC--CCCCEEEccCCccCccCC
Q 047739 282 TNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGL--WRLEELKMANNSFGGAVP 359 (1099)
Q Consensus 282 ~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l--~~L~~L~L~~n~l~~~~~ 359 (1099)
...++.|.++.+.+.. +.+.|.+.+..+..|.++ ++|++|+|++|.+.+..+
T Consensus 230 -----------~~~l~~L~l~~~~~~~---------------~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~ 283 (844)
T 3j0a_A 230 -----------KSQAFSLILAHHIMGA---------------GFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNS 283 (844)
T ss_dssp -----------SCCBSEEECCSSCCBC---------------SSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECS
T ss_pred -----------cccccceecccccccc---------------cccccccCCCChhhhhccccCCccEEECCCCcccccCh
Confidence 1234444444322211 112333333344445444 456666666666666666
Q ss_pred ccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCC
Q 047739 360 VEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNN 439 (1099)
Q Consensus 360 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 439 (1099)
..+..+++|++|+|++|++++..|..|..+++|++|+|++|.+++..+..|.++++|+.|+|++|++.+..+..|.++++
T Consensus 284 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~ 363 (844)
T 3j0a_A 284 RVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEK 363 (844)
T ss_dssp CCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCC
T ss_pred hhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCC
Confidence 66666666666666666666666666666666666666666666666666666677777777777666555556666677
Q ss_pred CCEEEccCCcCccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccC-CcccCCCCccceeeec
Q 047739 440 LSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGEL-PIELAGLPNLQVIALQ 518 (1099)
Q Consensus 440 L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~-~~~l~~l~~L~~L~L~ 518 (1099)
|++|+|++|.+++ +..+++|+.|++++|+++ .+|.. ..+++.|++++|++++.. +..+..+++|+.|+|+
T Consensus 364 L~~L~Ls~N~l~~-----i~~~~~L~~L~l~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls 434 (844)
T 3j0a_A 364 LQTLDLRDNALTT-----IHFIPSIPDIFLSGNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILN 434 (844)
T ss_dssp CCEEEEETCCSCC-----CSSCCSCSEEEEESCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEE
T ss_pred CCEEECCCCCCCc-----ccCCCCcchhccCCCCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCC
Confidence 7777777776663 222666777777777777 34433 456788888888887532 2335578888889999
Q ss_pred cccccCCCch-hhhcccccceecccccccC-----CCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCC
Q 047739 519 ENKLSGNVPE-GFSSLMSLRYLNLSFNGFV-----GQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSN 592 (1099)
Q Consensus 519 ~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N 592 (1099)
+|++++..+. .+..+++|++|++++|.++ +..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|
T Consensus 435 ~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 514 (844)
T 3j0a_A 435 QNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSN 514 (844)
T ss_dssp SCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESC
T ss_pred CCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCC
Confidence 8888855433 3556789999999999997 445577899999999999999999999999999999999999999
Q ss_pred cccCcCCcchhccCcccEEeccCccccccCCcccCCCCCCCEEECcCcccccc
Q 047739 593 SLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLSGG 645 (1099)
Q Consensus 593 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 645 (1099)
++++..|..+. ++|+.|||++|+|++.+|..+ .+|+.|++++|++...
T Consensus 515 ~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 515 RLTVLSHNDLP--ANLEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICE 562 (844)
T ss_dssp CCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCC---SSCCEEEEEEECCCCS
T ss_pred CCCccChhhhh--ccccEEECCCCcCCCCChhHh---CCcCEEEecCCCcccc
Confidence 99976666665 899999999999999888765 4899999999998754
No 12
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3.1e-55 Score=541.32 Aligned_cols=524 Identities=21% Similarity=0.204 Sum_probs=382.7
Q ss_pred cEEEeccccCCCccCcccccCCCCceeecccccCCCcccCCcc--cccceeeCCCCccCCCCCCCCcccccccccccccc
Q 047739 117 RAVFLQYNSLSGNLPANIGNLSNLEILNVAANRLSGEIANDLP--RNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFN 194 (1099)
Q Consensus 117 ~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~N~l~~~i~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N 194 (1099)
++++.+++.++ .+|..+. ++|++|+|++|.+++..+..+. ++|++|+|++|++++..|.+|+++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n 90 (606)
T 3vq2_A 14 ITYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGN 90 (606)
T ss_dssp TEEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred CceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCC
Confidence 45555555555 3444332 4455555555555544443433 45555555555555444455555555555555555
Q ss_pred ccccccccccccccCccccccCceeEEEccCCcCCccChhhhcCCCCccEEEcccccCCC-ccCcccccccCCCCCcceE
Q 047739 195 KFSREVPATFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSG-VVPASMFCNVSGYPPSIRV 273 (1099)
Q Consensus 195 ~l~~~~~~~~~g~lp~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~~~~~~~~~l~~ 273 (1099)
+++ +..|..++.+++|++|++++|++++..+..|+.+++|++|+|++|++++ .+|.
T Consensus 91 ~l~--------~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~--------------- 147 (606)
T 3vq2_A 91 PIQ--------SFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPA--------------- 147 (606)
T ss_dssp CCC--------CCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCG---------------
T ss_pred ccc--------ccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechH---------------
Confidence 554 2223344445555555555555554444445555555555555555542 2232
Q ss_pred EEeccccccccCCCCCCCCCCceeEEEcCCCccccCcchhccCCCCcc----EEeCCCCccccCchhhhCCCCCCCEEEc
Q 047739 274 VQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTLT----RLDVSGNSISGKIPAQIGGLWRLEELKM 349 (1099)
Q Consensus 274 l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~----~L~Ls~N~i~~~~p~~~~~l~~L~~L~L 349 (1099)
....+++|++|+|++|++++..|..|..+.+|+ +|++++|.+++..+..+... +|++|++
T Consensus 148 ---------------~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L 211 (606)
T 3vq2_A 148 ---------------YFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTL 211 (606)
T ss_dssp ---------------GGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEE
T ss_pred ---------------hHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeec
Confidence 122356677777777777776666666555443 67777777775544444444 6777777
Q ss_pred cCCccC-ccCCccccCCCCCCEEEccCCcCCC------CCCccccCCC--CCCeeec-cCccccccCCccCCCCCCCCEE
Q 047739 350 ANNSFG-GAVPVEIKQCSSLSLLDLEGNRFSG------EIPEFLGDIR--GLKSLTL-AANLFSGSIPASFRNLPGLENL 419 (1099)
Q Consensus 350 ~~n~l~-~~~~~~l~~l~~L~~L~Ls~N~l~~------~~p~~~~~l~--~L~~L~L-~~n~l~~~~~~~~~~l~~L~~L 419 (1099)
++|.+. +..|..+.++++|+.+++..+.+.+ ..+..+..+. +++.+++ ..|.+.+..|. +..+++|+.|
T Consensus 212 ~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L 290 (606)
T 3vq2_A 212 RGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAM 290 (606)
T ss_dssp ESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEE
T ss_pred cCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEE
Confidence 777765 3456666777777777765544432 1112222222 3555556 67788887777 9999999999
Q ss_pred EcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCc
Q 047739 420 NLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFS 499 (1099)
Q Consensus 420 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~ 499 (1099)
++++|.+. .+| .+..+++|+.|++++|.+ +.+| .+ .+++|+.|++++|+..+.. .+..+++|++|++++|+++
T Consensus 291 ~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~ 363 (606)
T 3vq2_A 291 SLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALS 363 (606)
T ss_dssp EEESCCCC-CCC-CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEE
T ss_pred EecCccch-hhh-hccccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccC
Confidence 99999997 456 788899999999999999 4777 45 9999999999999665443 6778999999999999998
Q ss_pred cc--CCcccCCCCccceeeeccccccCCCchhhhcccccceecccccccCCCCC-CcccccceeeEEEccCCcCCCCCCC
Q 047739 500 GE--LPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIP-ATFSFLRSVVVLSFSGNHISGSIPP 576 (1099)
Q Consensus 500 ~~--~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L~ls~N~l~~~~p~ 576 (1099)
+. .+..+..+++|+.|++++|.+++ +|..|..+++|++|++++|++.+..| ..+..+++|+.|++++|++++..|.
T Consensus 364 ~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 442 (606)
T 3vq2_A 364 FSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDG 442 (606)
T ss_dssp EEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTT
T ss_pred CCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchh
Confidence 66 47889999999999999999984 66889999999999999999998877 6899999999999999999999999
Q ss_pred CCCCCCCCceEEecCCcccC-cCCcchhccCcccEEeccCccccccCCcccCCCCCCCEEECcCccccccCChhhhccCC
Q 047739 577 ELGNCSDLEVLELRSNSLTG-HIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSN 655 (1099)
Q Consensus 577 ~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 655 (1099)
.++++++|++|++++|++++ .+|..++.+++|+.|+|++|++++..|..+..+++|++|+|++|++++.+|..+.++++
T Consensus 443 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 522 (606)
T 3vq2_A 443 IFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYS 522 (606)
T ss_dssp TTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTT
T ss_pred hhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCc
Confidence 99999999999999999997 47889999999999999999999888899999999999999999999888999999999
Q ss_pred CCeeecCCCcCCCcCCCCccccc-cccccccCCCCccc
Q 047739 656 LAVLDLSANNLSGEIPANLSSIF-GLMNFNVSSNNLQA 692 (1099)
Q Consensus 656 L~~L~ls~N~l~~~~p~~~~~~~-~l~~l~l~~n~~~~ 692 (1099)
|+.||+++|+++ .+|..+..++ +|+.+++++|++.|
T Consensus 523 L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c 559 (606)
T 3vq2_A 523 LSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVAC 559 (606)
T ss_dssp CCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCC
T ss_pred CCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCccc
Confidence 999999999999 6888788886 59999988887764
No 13
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.4e-50 Score=490.98 Aligned_cols=502 Identities=21% Similarity=0.247 Sum_probs=306.9
Q ss_pred eeecccccCCCcccCCcccccceeeCCCCccCCCCCCCCccccccccccccccccccccccccccccCccccccCceeEE
Q 047739 142 ILNVAANRLSGEIANDLPRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSLVHL 221 (1099)
Q Consensus 142 ~L~ls~N~l~~~i~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l~~l~~L~~L 221 (1099)
..+-++.+++ .||..+++++++|+|++|++++..+.+|+++++|++|+|++|++++. .|..++.+++|++|
T Consensus 11 ~~~c~~~~l~-~ip~~l~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i--------~~~~~~~l~~L~~L 81 (570)
T 2z63_A 11 TYQCMELNFY-KIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTI--------EDGAYQSLSHLSTL 81 (570)
T ss_dssp EEECCSSCCS-SCCSSSCSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEE--------CTTTTTTCTTCCEE
T ss_pred EEEeCCCCcc-ccCCCccccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCcc--------CcccccCchhCCEE
Confidence 3444555554 56777777888888888888877777888888888888888888732 23456678888888
Q ss_pred EccCCcCCccChhhhcCCCCccEEEcccccCCCccCcccccccCCCCCcceEEEeccccccccCCCCCCCCCCceeEEEc
Q 047739 222 SAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDL 301 (1099)
Q Consensus 222 ~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L 301 (1099)
++++|++++..|.+|+.+++|++|++++|++++ +|...| ..+++|++|+|
T Consensus 82 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~-----------------------------~~l~~L~~L~L 131 (570)
T 2z63_A 82 ILTGNPIQSLALGAFSGLSSLQKLVAVETNLAS-LENFPI-----------------------------GHLKTLKELNV 131 (570)
T ss_dssp ECTTCCCCEECTTTTTTCTTCCEEECTTSCCCC-STTCSC-----------------------------TTCTTCCEEEC
T ss_pred eCcCCcCCccCHhhhcCcccccccccccccccc-CCCccc-----------------------------cccccccEEec
Confidence 888888888777888888888888888888873 222112 23566777777
Q ss_pred CCCcccc-CcchhccCCCCccEEeCCCCccccCchhhhCCCCCC----CEEEccCCccCccCCccccCCCCCCEEEccCC
Q 047739 302 QQNQIRG-AFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRL----EELKMANNSFGGAVPVEIKQCSSLSLLDLEGN 376 (1099)
Q Consensus 302 ~~n~l~~-~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L----~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N 376 (1099)
++|++++ .+|..|.++++|++|++++|.+++..+..|+.+++| ++|++++|.+++..+..+..+ +|+.|++++|
T Consensus 132 ~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n 210 (570)
T 2z63_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNN 210 (570)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESC
T ss_pred CCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccc
Confidence 7777776 357777777888888888888777667777777777 778888887777666666655 6778887777
Q ss_pred cCCC-CCCccccCCCCCCeeeccCccc------cccCCccCCCCCC--CCEEEcccC-cCccccchhhhCCCCCCEEEcc
Q 047739 377 RFSG-EIPEFLGDIRGLKSLTLAANLF------SGSIPASFRNLPG--LENLNLRHN-SLSGSLPEEVLGMNNLSTLDLS 446 (1099)
Q Consensus 377 ~l~~-~~p~~~~~l~~L~~L~L~~n~l------~~~~~~~~~~l~~--L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~Ls 446 (1099)
.... .++..+..+++++.+.+..+.+ .......+.++++ ++.+++++| .+.+..|..+..+++|+.|+++
T Consensus 211 ~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~ 290 (570)
T 2z63_A 211 FDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLV 290 (570)
T ss_dssp CSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEE
T ss_pred cccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEec
Confidence 4331 2334445555555444332211 1111222222221 344555555 4455555555555666666666
Q ss_pred CCcCccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCC
Q 047739 447 ENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNV 526 (1099)
Q Consensus 447 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 526 (1099)
+|.++ .+|..+..+ +|+.|++++|.+. .+|. ..+++|++|++++|.+.+..+. ..+++|+.|++++|++++..
T Consensus 291 ~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~ 363 (570)
T 2z63_A 291 SVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKG 363 (570)
T ss_dssp SCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEE
T ss_pred Cccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccc
Confidence 66555 345555555 5666666666555 3332 3455566666666655544333 45555666666666555332
Q ss_pred --chhhhcccccceecccccccCCCCCCcccccceeeEEEccCCcCCCCCC-CCCCCCCCCceEEecCCcccCcCCcchh
Q 047739 527 --PEGFSSLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIP-PELGNCSDLEVLELRSNSLTGHIPTDIS 603 (1099)
Q Consensus 527 --p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 603 (1099)
+..+..+++|++|++++|.+.+..+. +..+++|+.|++++|++++..| ..+.++++|++|++++|.+++..|..+.
T Consensus 364 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 442 (570)
T 2z63_A 364 CCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN 442 (570)
T ss_dssp EEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTT
T ss_pred cccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhh
Confidence 45555556666666666655543333 5555666666666666554444 3455556666666666666555555555
Q ss_pred ccCcccEEeccCcccc-ccCCcccCCCCCCCEEECcCccccccCChhhhccCCCCeeecCCCcCCCcCCCCccccccccc
Q 047739 604 HLSHLNVLDLSINNLT-GEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLSGEIPANLSSIFGLMN 682 (1099)
Q Consensus 604 ~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~ 682 (1099)
.+++|+.|++++|.++ +.+|..+..+++|+.|+|++|++++..|..+.++++|+.|++++|++++..|..+..+.+|+.
T Consensus 443 ~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 522 (570)
T 2z63_A 443 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQK 522 (570)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred cCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcE
Confidence 6666666666666655 345555666666666666666666555556666666666666666666555555555555666
Q ss_pred cccCCCCcc
Q 047739 683 FNVSSNNLQ 691 (1099)
Q Consensus 683 l~l~~n~~~ 691 (1099)
+++++|++.
T Consensus 523 L~l~~N~~~ 531 (570)
T 2z63_A 523 IWLHTNPWD 531 (570)
T ss_dssp EECCSSCBC
T ss_pred EEecCCccc
Confidence 665555544
No 14
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.2e-50 Score=499.86 Aligned_cols=516 Identities=19% Similarity=0.252 Sum_probs=262.0
Q ss_pred hhHHHHHHHHHhCCCCCCCCCCCCCCCCCCC--Cccc-ceEecC----CcEeEEecCCCccccccccccccccccceEEc
Q 047739 25 PEIEALTSFKLNLHDPLGALNGWDSSTPAAP--CDWR-GVACTN----NRVTELRLPRLQLSGRISDHLSNLRMLRKLSL 97 (1099)
Q Consensus 25 ~~~~~l~~~k~~~~~~~~~l~~w~~~~~~~~--c~w~-gv~c~~----~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L 97 (1099)
.+...-.++++-...-.+ .+|....+..| |.|. +..|.. .-|+. . .. .+++.|+|
T Consensus 27 ~~~~d~~aL~~~~~~~~~--~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C---~---------~~----~~V~~L~L 88 (636)
T 4eco_A 27 EYIKDYLALKEIWDALNG--KNWSQQGFGTQPGANWNFNKELDMWGAQPGVSL---N---------SN----GRVTGLSL 88 (636)
T ss_dssp HHHHHHHHHHHHHHHTTG--GGCCCCC------CCCCCSSCGGGTTCCTTEEE---C---------TT----CCEEEEEC
T ss_pred hHHHHHHHHHHHHHHcCC--CCcccCCcCCccCCCCCCCCCcccccCCCCeEE---c---------CC----CCEEEEEe
Confidence 556666666655533344 47886544334 5895 333321 22332 0 00 46789999
Q ss_pred cCCccCcccCcccccCCcccEEEeccccC------CC------ccCcccccCCCCceeecccccCCCcccCCcc---ccc
Q 047739 98 RSNSFNGTIPATLAQCTLLRAVFLQYNSL------SG------NLPANIGNLSNLEILNVAANRLSGEIANDLP---RNL 162 (1099)
Q Consensus 98 ~~n~~~~~~p~~~~~l~~L~~L~l~~n~l------~g------~~p~~~~~l~~L~~L~ls~N~l~~~i~~~~~---~~L 162 (1099)
++|.++|.+|+++++|++|++|||++|.+ .| .+|... +..|+ +++++|.+.+.+|..+. .++
T Consensus 89 ~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l 165 (636)
T 4eco_A 89 EGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDC 165 (636)
T ss_dssp TTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHH
T ss_pred cCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHH
Confidence 99999999999999999999999999987 33 444443 45555 66666666666665544 233
Q ss_pred ceeeCCCCccCCCCCCCCccccccccccccccccccccccccccccCccccccCceeEEEccCCcCCccChhhhcCCCCc
Q 047739 163 KYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAIGALPKL 242 (1099)
Q Consensus 163 ~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 242 (1099)
..+++....+.. .....++.+.+.. .+|++++ +|.+|+++++|
T Consensus 166 ~~~~l~~~~~~~------~~~~~l~~l~l~~------------------------------~~n~l~~-ip~~l~~l~~L 208 (636)
T 4eco_A 166 INSDPQQKSIKK------SSRITLKDTQIGQ------------------------------LSNNITF-VSKAVMRLTKL 208 (636)
T ss_dssp HHHCTTSCCCCC------CCCCCCCTTTTTC------------------------------CSCEEEE-ECGGGGGCTTC
T ss_pred hhcCcccccccc------ccccchhhhhhcc------------------------------ccCCCcc-CCHHHhcccCC
Confidence 333333332221 1112222222221 1344444 44555555555
Q ss_pred cEEEcccccCCCc-cCcccccccCCCCCcceEEEeccccc-cccCCCCCCCCCCceeEEEcCCCccccCcchhccCCCCc
Q 047739 243 QVVSLAQNNLSGV-VPASMFCNVSGYPPSIRVVQLGFNAF-TNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTL 320 (1099)
Q Consensus 243 ~~L~Ls~N~l~~~-~p~~~~~~~~~~~~~l~~l~l~~n~~-~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L 320 (1099)
++|+|++|++++. ++..... .. .+.. ..++.......+++|++|+|++|++.+.+|..|.++++|
T Consensus 209 ~~L~Ls~n~l~~~~~~~~~~~------~~-------~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 275 (636)
T 4eco_A 209 RQFYMGNSPFVAENICEAWEN------EN-------SEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEM 275 (636)
T ss_dssp CEEEEESCCCCGGGBSSSCSC------TT-------SHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSC
T ss_pred CEEECcCCccccccccccccc------cc-------cchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCC
Confidence 5555555555542 1100000 00 0000 000000000012233333333333334444445555555
Q ss_pred cEEeCCCCc-ccc-CchhhhCCC------CCCCEEEccCCccCccCCc--cccCCCCCCEEEccCCcCCCCCCccccCCC
Q 047739 321 TRLDVSGNS-ISG-KIPAQIGGL------WRLEELKMANNSFGGAVPV--EIKQCSSLSLLDLEGNRFSGEIPEFLGDIR 390 (1099)
Q Consensus 321 ~~L~Ls~N~-i~~-~~p~~~~~l------~~L~~L~L~~n~l~~~~~~--~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 390 (1099)
++|+|++|+ +++ .+|..++.+ ++|++|+|++|+++ .+|. .+.++++|++|+|++|+++|.+| .++.++
T Consensus 276 ~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~ 353 (636)
T 4eco_A 276 QLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEI 353 (636)
T ss_dssp CEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEE
T ss_pred CEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCC
Confidence 555555555 555 455555444 45555555555555 4444 45555555555555555554444 444444
Q ss_pred CCCeeeccCccccccCCccCCCCCC-CCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEc
Q 047739 391 GLKSLTLAANLFSGSIPASFRNLPG-LENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNL 469 (1099)
Q Consensus 391 ~L~~L~L~~n~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 469 (1099)
+|++|+|++|+++ .+|..+.++++ |++|++++|+++ .+|..+..+. +++|+.|++
T Consensus 354 ~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~----------------------l~~L~~L~L 409 (636)
T 4eco_A 354 KLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKS----------------------VSVMSAIDF 409 (636)
T ss_dssp EESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTC----------------------SSCEEEEEC
T ss_pred CCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcc----------------------cCccCEEEC
Confidence 4444444444444 33444444444 444444444444 3444333322 114444444
Q ss_pred cCCcCCCcCCCCCC-------CCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchh-hh-------ccc
Q 047739 470 SGNAFSGRIPASLG-------NLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEG-FS-------SLM 534 (1099)
Q Consensus 470 ~~N~l~~~~~~~l~-------~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~-~~-------~l~ 534 (1099)
++|++++..|..+. .+.+|++|++++|+++...+..+..+++|+.|+|++|+++ .+|.. +. +++
T Consensus 410 s~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~ 488 (636)
T 4eco_A 410 SYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTY 488 (636)
T ss_dssp CSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGG
T ss_pred cCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccC
Confidence 44444444444444 4445555555555555322222334555555555555555 23322 22 223
Q ss_pred ccceecccccccCCCCCCccc--ccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecC------CcccCcCCcchhccC
Q 047739 535 SLRYLNLSFNGFVGQIPATFS--FLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRS------NSLTGHIPTDISHLS 606 (1099)
Q Consensus 535 ~L~~L~Ls~N~l~~~~~~~l~--~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~------N~l~~~~p~~~~~l~ 606 (1099)
+|++|+|++|+++ .+|..+. .+++|+.|++++|++++ +|..++++++|++|+|++ |++.+.+|..++.++
T Consensus 489 ~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~ 566 (636)
T 4eco_A 489 LLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCP 566 (636)
T ss_dssp GCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCS
T ss_pred CccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCC
Confidence 7777777777777 5666665 77777777777777775 777777777777777755 445555555555555
Q ss_pred cccEEeccCccccccCCcccCCCCCCCEEECcCcccc
Q 047739 607 HLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLS 643 (1099)
Q Consensus 607 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 643 (1099)
+|+.|+|++|++ +.+|..+. ++|+.|+|++|++.
T Consensus 567 ~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~ 600 (636)
T 4eco_A 567 SLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNI 600 (636)
T ss_dssp SCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTC
T ss_pred CCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCc
Confidence 555555555555 24555443 45555555555443
No 15
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.3e-49 Score=485.07 Aligned_cols=489 Identities=19% Similarity=0.249 Sum_probs=350.3
Q ss_pred CCcccceEecCCcEeEEecCCCccccccccccccccccceEEccCCccCcccCcccccCCcccEEEeccccCCCccCccc
Q 047739 55 PCDWRGVACTNNRVTELRLPRLQLSGRISDHLSNLRMLRKLSLRSNSFNGTIPATLAQCTLLRAVFLQYNSLSGNLPANI 134 (1099)
Q Consensus 55 ~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~ 134 (1099)
.|.|.|| |+. ++++++ .||+.+. +.|++|+|++|++++..|..++++++|++|+|++|++++..|..+
T Consensus 3 ~C~~~~~-c~~--------~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~ 70 (549)
T 2z81_A 3 SCDASGV-CDG--------RSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAF 70 (549)
T ss_dssp EECTTSE-EEC--------TTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTT
T ss_pred cCCCCce-EEC--------CCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhc
Confidence 4999999 964 233332 4666554 789999999999998888999999999999999999999888999
Q ss_pred ccCCCCceeecccccCCCcccCCcc--cccceeeCCCCccCC-CCCCCCccccccccccccccccccccccccccccC-c
Q 047739 135 GNLSNLEILNVAANRLSGEIANDLP--RNLKYFDLSSNGFSG-PIPTSISNLSQLQLINFSFNKFSREVPATFEGTLP-S 210 (1099)
Q Consensus 135 ~~l~~L~~L~ls~N~l~~~i~~~~~--~~L~~L~ls~N~l~~-~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp-~ 210 (1099)
+++++|++|+|++|.+++..|..+. ++|++|+|++|++++ .+|..++++++|++|++++|++. +.+| .
T Consensus 71 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~--------~~~~~~ 142 (549)
T 2z81_A 71 YSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETF--------SEIRRI 142 (549)
T ss_dssp TTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSC--------CEECTT
T ss_pred cccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccc--------cccCHh
Confidence 9999999999999999987776555 789999999999986 46788999999999999999854 3444 4
Q ss_pred cccccCceeEEEccCCcCCccChhhhcCCCCccEEEcccccCCCccCcccccccCCCCCcceEEEeccccccccCCCCCC
Q 047739 211 AIANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETG 290 (1099)
Q Consensus 211 ~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~ 290 (1099)
.++.+++|++|++++|++++..|..++.+++|++|+++.|.+. .+|...+..
T Consensus 143 ~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~--------------------------- 194 (549)
T 2z81_A 143 DFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADI--------------------------- 194 (549)
T ss_dssp TTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHS---------------------------
T ss_pred hhhcccccCeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhh---------------------------
Confidence 6778899999999999999999999999999999999999875 444433322
Q ss_pred CCCCceeEEEcCCCccccCc--c-hhccCCCCccEEeCCCCccccCchhh----hCCCCCCCEEEccCCccCccC-----
Q 047739 291 SCSSVLQVLDLQQNQIRGAF--P-LWLTRASTLTRLDVSGNSISGKIPAQ----IGGLWRLEELKMANNSFGGAV----- 358 (1099)
Q Consensus 291 ~~~~~L~~L~L~~n~l~~~~--~-~~~~~l~~L~~L~Ls~N~i~~~~p~~----~~~l~~L~~L~L~~n~l~~~~----- 358 (1099)
+++|++|++++|++++.. | .....+++|++|++++|.+++..+.. +..+.+|+.|++++|.+.+..
T Consensus 195 --l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~ 272 (549)
T 2z81_A 195 --LSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPS 272 (549)
T ss_dssp --TTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCC
T ss_pred --cccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhcccccccccccccccccccccc
Confidence 345666666666666531 1 12234566777777777776544433 345667777777777665421
Q ss_pred -CccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhh-hC
Q 047739 359 -PVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEV-LG 436 (1099)
Q Consensus 359 -~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~ 436 (1099)
...+..+.+|+.|+++++.+.... .+.+ .+..+..+++|+.|++++|+++ .+|..+ ..
T Consensus 273 ~~~~~~~l~~L~~L~l~~~~i~~~~--~~~~-----------------l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~ 332 (549)
T 2z81_A 273 ESDVVSELGKVETVTIRRLHIPQFY--LFYD-----------------LSTVYSLLEKVKRITVENSKVF-LVPCSFSQH 332 (549)
T ss_dssp TTTCCCCCTTCCEEEEESCBCSCGG--GSCC-----------------CCHHHHHSTTCCEEEEESSCCC-CCCHHHHHH
T ss_pred chhhhhhhcccccccccccccchhh--hccc-----------------chhhhhhcccceEEEeccCccc-cCCHHHHhc
Confidence 122344555556665555543110 0000 1111222356677777777766 455554 45
Q ss_pred CCCCCEEEccCCcCccccC---cccCCCCcccEEEccCCcCCCcCC--CCCCCCCCCCEEEeccCcCcccCCcccCCCCc
Q 047739 437 MNNLSTLDLSENKFSGEVP---ASIGNLSQLMVFNLSGNAFSGRIP--ASLGNLLKLTTLDLSKQNFSGELPIELAGLPN 511 (1099)
Q Consensus 437 l~~L~~L~Ls~N~l~~~~~---~~l~~l~~L~~L~L~~N~l~~~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~ 511 (1099)
+++|++|+|++|++++..| ..++.+++|+.|+|++|++++..+ ..+..+++|++|++++|+++ .+|..+..+++
T Consensus 333 l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~ 411 (549)
T 2z81_A 333 LKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEK 411 (549)
T ss_dssp CTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTT
T ss_pred CccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhccccc
Confidence 7777777777777765543 335667777777777777764322 34666777777777777777 56666777777
Q ss_pred cceeeeccccccCCCchhhhcccccceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecC
Q 047739 512 LQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRS 591 (1099)
Q Consensus 512 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~ 591 (1099)
|+.|++++|+++ .+|..+ .++|++|++++|++++.+ ..+++|++|++++|+++ .+|. ...+++|++|+|++
T Consensus 412 L~~L~Ls~N~l~-~l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~ 482 (549)
T 2z81_A 412 MRFLNLSSTGIR-VVKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISR 482 (549)
T ss_dssp CCEEECTTSCCS-CCCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCS
T ss_pred ccEEECCCCCcc-cccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCC
Confidence 777777777776 334333 257888888888887543 46778888888888888 6666 46788999999999
Q ss_pred CcccCcCCcchhccCcccEEeccCccccccCC
Q 047739 592 NSLTGHIPTDISHLSHLNVLDLSINNLTGEIP 623 (1099)
Q Consensus 592 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 623 (1099)
|++++..|..+..+++|+.|++++|++++..|
T Consensus 483 N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 483 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp SCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred CccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 99998777888999999999999999887665
No 16
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.9e-50 Score=450.34 Aligned_cols=265 Identities=25% Similarity=0.397 Sum_probs=210.2
Q ss_pred HhccccccccccccceeEEEEEEC------CceEEEEEECCCCCc-cHHHHHHHHHHhhhccCCcceEEeeEEecCCCce
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN------DGMVLSIRRLPDGSL-DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR 874 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 874 (1099)
.++|...++||+|+||+||+|+++ +++.||||++..... ..+.|.+|++++++++|||||+++|+|.+. ...
T Consensus 40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~-~~~ 118 (329)
T 4aoj_A 40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEG-RPL 118 (329)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-SSE
T ss_pred HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-CEE
Confidence 356788899999999999999875 478999999976543 347799999999999999999999999854 456
Q ss_pred EEEEeecCCCCHHHHHhhhccC----------CCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEE
Q 047739 875 LLVYDYMPNGNLGTLLQEASHQ----------DGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAH 944 (1099)
Q Consensus 875 ~lV~e~~~~gsL~~~l~~~~~~----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~k 944 (1099)
|+|||||++|+|.++++..... ....++|.++..|+.|||+||+|||+.+||||||||+|||+++++.+|
T Consensus 119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~K 198 (329)
T 4aoj_A 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVK 198 (329)
T ss_dssp EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEE
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEE
Confidence 9999999999999999864321 234699999999999999999999999999999999999999999999
Q ss_pred EeccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHh
Q 047739 945 LSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQL 1023 (1099)
Q Consensus 945 l~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~ 1023 (1099)
|+|||+|+..... .........+||+.|||||++.+..++.++|||||||++|||+| |+.||......+....+....
T Consensus 199 i~DFGla~~~~~~-~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~ 277 (329)
T 4aoj_A 199 IGDFGMSRDIYST-DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGR 277 (329)
T ss_dssp ECCCC-----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTC
T ss_pred EcccccceeccCC-CcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence 9999999865322 12223345689999999999999999999999999999999999 899998877766665554321
Q ss_pred hhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCCC
Q 047739 1024 QKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPD 1085 (1099)
Q Consensus 1024 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 1085 (1099)
. .+. +...+ ..+.+++.+||+.||++||||+||++.|+.+...|+
T Consensus 278 ~----~~~---------p~~~~----~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~pp 322 (329)
T 4aoj_A 278 E----LER---------PRACP----PEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPP 322 (329)
T ss_dssp C----CCC---------CTTCC----HHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSCC
T ss_pred C----CCC---------ccccc----HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCCc
Confidence 1 100 11111 124578999999999999999999999999877654
No 17
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1e-48 Score=479.66 Aligned_cols=463 Identities=21% Similarity=0.224 Sum_probs=247.0
Q ss_pred ccceEEccCCccCcccCcccccCCcccEEEeccccCCCccCcccccCCCCceeecccccCCCcccCCcc--cccceeeCC
Q 047739 91 MLRKLSLRSNSFNGTIPATLAQCTLLRAVFLQYNSLSGNLPANIGNLSNLEILNVAANRLSGEIANDLP--RNLKYFDLS 168 (1099)
Q Consensus 91 ~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~N~l~~~i~~~~~--~~L~~L~ls 168 (1099)
.++.|+|++|++++..|..+.++++|++|||++|++++..|..++++++|++|+|++|.+++..|..+. ++|++|+++
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 456666666666655555566666666666666666655555566666666666666666554444443 566666666
Q ss_pred CCccCCCCCCCCccccccccccccccccccccccccccccCccccccCceeEEEccCCcCCccChhhhcCCCCc----cE
Q 047739 169 SNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAIGALPKL----QV 244 (1099)
Q Consensus 169 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L----~~ 244 (1099)
+|++++..+..++++++|++|++++|+++. ..+|..++++++|++|++++|++++..+..|+.+++| ++
T Consensus 109 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~-------~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~ 181 (570)
T 2z63_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQS-------FKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLS 181 (570)
T ss_dssp TSCCCCSTTCSCTTCTTCCEEECCSSCCCC-------CCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCE
T ss_pred ccccccCCCccccccccccEEecCCCccce-------ecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhh
Confidence 666664444456666666666666666652 1345556666666666666666666656666655555 56
Q ss_pred EEcccccCCCccCcccccccCCCCCcceEEEeccccccccCCCCCCCCCCceeEEEcCCCcccc-CcchhccCCCCc---
Q 047739 245 VSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRG-AFPLWLTRASTL--- 320 (1099)
Q Consensus 245 L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~~l~~L--- 320 (1099)
|++++|.+++..|. .|.. ..|+.|++++|.... .++..+..++++
T Consensus 182 L~l~~n~l~~~~~~-~~~~------------------------------~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~ 230 (570)
T 2z63_A 182 LDLSLNPMNFIQPG-AFKE------------------------------IRLHKLTLRNNFDSLNVMKTCIQGLAGLEVH 230 (570)
T ss_dssp EECTTCCCCEECTT-TTTT------------------------------CEEEEEEEESCCSCTTHHHHHHHTTTTCEEE
T ss_pred cccCCCCceecCHH-Hhcc------------------------------CcceeEecccccccccchhhhhcCcccccee
Confidence 66666666533222 2211 123333333332211 122233333333
Q ss_pred -----------------------------cEEeCCCC-ccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCE
Q 047739 321 -----------------------------TRLDVSGN-SISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSL 370 (1099)
Q Consensus 321 -----------------------------~~L~Ls~N-~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 370 (1099)
+.+++++| .+.+..|..|..+++|++|++++|.++ .+|..+..+ +|++
T Consensus 231 ~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~ 308 (570)
T 2z63_A 231 RLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQH 308 (570)
T ss_dssp EEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSE
T ss_pred eeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccE
Confidence 34444444 344444444444444555555444444 244444444 4555
Q ss_pred EEccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCcccc--chhhhCCCCCCEEEccCC
Q 047739 371 LDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSL--PEEVLGMNNLSTLDLSEN 448 (1099)
Q Consensus 371 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~Ls~N 448 (1099)
|++++|.+. .+|. ..+++|++|++++|.+.+..+. ..+++|++|++++|++++.. +..+.++++|++|++++|
T Consensus 309 L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n 383 (570)
T 2z63_A 309 LELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFN 383 (570)
T ss_dssp EEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSC
T ss_pred EeeccCccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCC
Confidence 555555444 3332 2344444444444444433332 34444555555555444322 344444444555555444
Q ss_pred cCccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCC-cccCCCCccceeeeccccccCCCc
Q 047739 449 KFSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELP-IELAGLPNLQVIALQENKLSGNVP 527 (1099)
Q Consensus 449 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~p 527 (1099)
.+++..+ . +.++++|++|++++|.+.+..+ ..+..+++|+.|++++|.+.+..|
T Consensus 384 ~l~~~~~------------------------~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 438 (570)
T 2z63_A 384 GVITMSS------------------------N-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFN 438 (570)
T ss_dssp SEEEEEE------------------------E-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCT
T ss_pred ccccccc------------------------c-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccch
Confidence 4443222 2 4444555555555555444333 234455555555555555555555
Q ss_pred hhhhcccccceecccccccC-CCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccC
Q 047739 528 EGFSSLMSLRYLNLSFNGFV-GQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLS 606 (1099)
Q Consensus 528 ~~~~~l~~L~~L~Ls~N~l~-~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 606 (1099)
..|..+++|++|++++|.++ +.+|..+..+++|+.|++++|++++..|..++++++|++|+|++|++++..|..+..++
T Consensus 439 ~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 518 (570)
T 2z63_A 439 GIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLT 518 (570)
T ss_dssp TTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCT
T ss_pred hhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhccc
Confidence 55555566666666666655 34556666666666666666666666666666677777777777777665556666777
Q ss_pred cccEEeccCccccccCC
Q 047739 607 HLNVLDLSINNLTGEIP 623 (1099)
Q Consensus 607 ~L~~L~Ls~N~l~~~~p 623 (1099)
+|+.|++++|++++..|
T Consensus 519 ~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 519 SLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp TCCEEECCSSCBCCCTT
T ss_pred CCcEEEecCCcccCCCc
Confidence 77777777777766544
No 18
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.3e-50 Score=444.83 Aligned_cols=262 Identities=24% Similarity=0.413 Sum_probs=212.9
Q ss_pred hccccccccccccceeEEEEEEC------CceEEEEEECCCCCc-cHHHHHHHHHHhhhccCCcceEEeeEEecCCCceE
Q 047739 803 RQFDEENVLSRTRYGLVFKACYN------DGMVLSIRRLPDGSL-DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 875 (1099)
++|.+.+.||+|+||+||+|++. ++..||||++..... ..++|.+|++++++++|||||+++|+|.+. +..|
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~-~~~~ 91 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEG-DPLI 91 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-SSEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeC-CEEE
Confidence 57888999999999999999874 478999999976443 347799999999999999999999999854 4569
Q ss_pred EEEeecCCCCHHHHHhhhc--------cCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEec
Q 047739 876 LVYDYMPNGNLGTLLQEAS--------HQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSD 947 (1099)
Q Consensus 876 lV~e~~~~gsL~~~l~~~~--------~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~D 947 (1099)
+|||||++|+|.++++..+ ......++|..+..|+.|||+||+|||+.+||||||||+|||+++++.+||+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~D 171 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGD 171 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECC
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECC
Confidence 9999999999999998643 12345699999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhc
Q 047739 948 FGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKG 1026 (1099)
Q Consensus 948 fGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~ 1026 (1099)
||+|+...... .........||+.|||||++.+..|+.++|||||||++|||+| |+.||......++...+...
T Consensus 172 FGla~~~~~~~-~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~---- 246 (299)
T 4asz_A 172 FGMSRDVYSTD-YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQG---- 246 (299)
T ss_dssp CSCHHHHTGGG-CEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHT----
T ss_pred cccceecCCCC-ceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC----
Confidence 99998652211 1122334579999999999999999999999999999999999 89999887776665555432
Q ss_pred cccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCC
Q 047739 1027 QITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVG 1083 (1099)
Q Consensus 1027 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 1083 (1099)
..... +...+ ..+.+++.+||+.||++||||+||.+.|+++...
T Consensus 247 ~~~~~---------p~~~~----~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 247 RVLQR---------PRTCP----QEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp CCCCC---------CTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCC---------Cccch----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 11110 11111 1245899999999999999999999999987643
No 19
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-49 Score=437.34 Aligned_cols=261 Identities=23% Similarity=0.357 Sum_probs=202.3
Q ss_pred HhccccccccccccceeEEEEEECCceEEEEEECCCCCc---cHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSL---DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVY 878 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 878 (1099)
.++|.+.++||+|+||+||+|++++ .||||+++.... ..+.|.+|++++++++|||||+++|++.+ + ..++||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~-~~~iVm 110 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-D-NLAIVT 110 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-S-SCEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-C-eEEEEE
Confidence 3567888999999999999999864 488998864333 23679999999999999999999999874 3 369999
Q ss_pred eecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCC
Q 047739 879 DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTP 958 (1099)
Q Consensus 879 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 958 (1099)
|||++|+|.++++.. ...++|..+..|+.|||+||+|||+.+||||||||+|||+++++.+||+|||+|+.....
T Consensus 111 Ey~~gGsL~~~l~~~----~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~- 185 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQ----ETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW- 185 (307)
T ss_dssp ECCSSCBHHHHHHTS----CCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-----
T ss_pred EcCCCCCHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccC-
Confidence 999999999999742 245999999999999999999999999999999999999999999999999999865321
Q ss_pred CCCccccccccCccccCcccccc---CCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCc
Q 047739 959 AEASTSTTAVGTLGYVSPEAALT---GETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPG 1035 (1099)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1035 (1099)
.........+||+.|||||++.+ +.|+.++|||||||++|||+||+.||...........+.. .+.. .+.
T Consensus 186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~---~~~~----~p~ 258 (307)
T 3omv_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVG---RGYA----SPD 258 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHH---TTCC----CCC
T ss_pred CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHh---cCCC----CCC
Confidence 12233456789999999999864 3589999999999999999999999987655443332221 1111 111
Q ss_pred ccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCC
Q 047739 1036 LLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVG 1083 (1099)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 1083 (1099)
.....+ ..+ ..+.+++.+||+.||++||||.||++.|+.++..
T Consensus 259 ~~~~~~-~~~----~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 259 LSKLYK-NCP----KAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp STTSCT-TSC----HHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred cccccc-cch----HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 111111 111 1245789999999999999999999999987653
No 20
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=7.7e-50 Score=442.56 Aligned_cols=259 Identities=24% Similarity=0.380 Sum_probs=210.8
Q ss_pred hccccccccccccceeEEEEEEC------CceEEEEEECCCCC--ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCce
Q 047739 803 RQFDEENVLSRTRYGLVFKACYN------DGMVLSIRRLPDGS--LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR 874 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 874 (1099)
.++.+.+.||+|+||+||+|.+. +++.||||++.... ...+.|.+|++++++++|||||+++|+|.+. ...
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~-~~~ 104 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD-QPL 104 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSS-SSC
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEEC-CEE
Confidence 35667789999999999999873 46899999996543 2357899999999999999999999999854 446
Q ss_pred EEEEeecCCCCHHHHHhhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcE
Q 047739 875 LLVYDYMPNGNLGTLLQEASHQ-----------DGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEA 943 (1099)
Q Consensus 875 ~lV~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~ 943 (1099)
++|||||++|+|.+++...... ....++|..+..|+.|||+||+|||+.+||||||||+|||+++++.+
T Consensus 105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~ 184 (308)
T 4gt4_A 105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNV 184 (308)
T ss_dssp EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCE
T ss_pred EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCE
Confidence 9999999999999999753211 12458999999999999999999999999999999999999999999
Q ss_pred EEeccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHH
Q 047739 944 HLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQ 1022 (1099)
Q Consensus 944 kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~ 1022 (1099)
||+|||+|+..... .........+||+.|||||++.++.|+.++|||||||++|||+| |+.||......++...+..
T Consensus 185 Ki~DFGlar~~~~~-~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~- 262 (308)
T 4gt4_A 185 KISDLGLFREVYAA-DYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRN- 262 (308)
T ss_dssp EECCSCCBCGGGGG-GCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHT-
T ss_pred EECCcccceeccCC-CceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-
Confidence 99999999865322 12233455789999999999999999999999999999999999 8999988777666555443
Q ss_pred hhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcc
Q 047739 1023 LQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGC 1080 (1099)
Q Consensus 1023 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~ 1080 (1099)
+..... +..++ ..+.+++.+||+.||++||||+||++.|+..
T Consensus 263 ---~~~~~~---------p~~~~----~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 263 ---RQVLPC---------PDDCP----AWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp ---TCCCCC---------CTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred ---CCCCCC---------cccch----HHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 211111 11111 1245789999999999999999999999864
No 21
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=3e-49 Score=481.92 Aligned_cols=481 Identities=20% Similarity=0.242 Sum_probs=270.2
Q ss_pred ecccccCCCcccCCcccccceeeCCCCccCCCCCCCCccccccccccccccccccccccccccccCccccccCceeEEEc
Q 047739 144 NVAANRLSGEIANDLPRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSLVHLSA 223 (1099)
Q Consensus 144 ~ls~N~l~~~i~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l~~l~~L~~L~l 223 (1099)
|.++|.++ .+|..++++|++|+|++|++++..|..|+++++|++|+|++|++++ ..|..++.+++|++|+|
T Consensus 11 ~~~~~~l~-~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~--------~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 11 DGRSRSFT-SIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINT--------IEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp ECTTSCCS-SCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCE--------ECTTTTTTCTTCCEEEC
T ss_pred ECCCCccc-cccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCc--------cChhhccccccCCEEEC
Confidence 33334443 3444444455555555555555545555555555555555555552 22233444555555555
Q ss_pred cCCcCCccChhhhcCCCCccEEEcccccCCCc-cCcccccccCCCCCcceEEEecccc-ccccCCCCCCCCCCceeEEEc
Q 047739 224 QGNALGGVIPPAIGALPKLQVVSLAQNNLSGV-VPASMFCNVSGYPPSIRVVQLGFNA-FTNVAGPETGSCSSVLQVLDL 301 (1099)
Q Consensus 224 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~~~~~~~~~l~~l~l~~n~-~~~~~~~~~~~~~~~L~~L~L 301 (1099)
++|++++..|.+|+.+++|++|+|++|++++. +|. .|.. .++++.|++++|. +..++.. ....+++|++|++
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~-~~~~----l~~L~~L~L~~n~~~~~~~~~-~~~~l~~L~~L~L 155 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTS-LFPN----LTNLQTLRIGNVETFSEIRRI-DFAGLTSLNELEI 155 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSC-SCTT----CTTCCEEEEEESSSCCEECTT-TTTTCCEEEEEEE
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhh-hhhc----cCCccEEECCCCccccccCHh-hhhcccccCeeec
Confidence 55555555555555555555555555555431 111 1111 0111111111111 0111000 0112344555555
Q ss_pred CCCccccCcchhccCCCCccEEeCCCCccccCchhh-hCCCCCCCEEEccCCccCccC--C-ccccCCCCCCEEEccCCc
Q 047739 302 QQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQ-IGGLWRLEELKMANNSFGGAV--P-VEIKQCSSLSLLDLEGNR 377 (1099)
Q Consensus 302 ~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~-~~~l~~L~~L~L~~n~l~~~~--~-~~l~~l~~L~~L~Ls~N~ 377 (1099)
++|++++..|..+..+++|++|++++|.+.. +|.. ++.+++|++|++++|++++.. + .....+++|+.|++++|.
T Consensus 156 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~ 234 (549)
T 2z81_A 156 KALSLRNYQSQSLKSIRDIHHLTLHLSESAF-LLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSV 234 (549)
T ss_dssp EETTCCEECTTTTTTCSEEEEEEEECSBSTT-HHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCE
T ss_pred cCCcccccChhhhhccccCceEecccCcccc-cchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccc
Confidence 5555555555555555555555555555542 2222 234455555555555554321 1 112233444444444444
Q ss_pred CCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCcccc------chhhhCCCCCCEEEccCCcCc
Q 047739 378 FSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSL------PEEVLGMNNLSTLDLSENKFS 451 (1099)
Q Consensus 378 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~------~~~~~~l~~L~~L~Ls~N~l~ 451 (1099)
+++..+.. ++..+..+++|+.+++++|.+.+.. ...+..+.+|+.|++.++.+.
T Consensus 235 l~~~~~~~--------------------l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~ 294 (549)
T 2z81_A 235 LTDESFNE--------------------LLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIP 294 (549)
T ss_dssp EEHHHHHH--------------------HHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCS
T ss_pred cchhHHHH--------------------HHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccc
Confidence 44322211 1122233445555555555444311 112334455555555555543
Q ss_pred cc-----cCcccCCCCcccEEEccCCcCCCcCCCCC-CCCCCCCEEEeccCcCcccCC---cccCCCCccceeeeccccc
Q 047739 452 GE-----VPASIGNLSQLMVFNLSGNAFSGRIPASL-GNLLKLTTLDLSKQNFSGELP---IELAGLPNLQVIALQENKL 522 (1099)
Q Consensus 452 ~~-----~~~~l~~l~~L~~L~L~~N~l~~~~~~~l-~~l~~L~~L~L~~n~l~~~~~---~~l~~l~~L~~L~L~~N~l 522 (1099)
.. ++..+....+|+.|++++|.++ .+|..+ .++++|++|++++|++++..| ..++.+++|+.|++++|++
T Consensus 295 ~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l 373 (549)
T 2z81_A 295 QFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHL 373 (549)
T ss_dssp CGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCC
T ss_pred hhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcc
Confidence 21 1111223356777777777766 455444 457777777777777776553 2366777788888888877
Q ss_pred cCCCc--hhhhcccccceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCc
Q 047739 523 SGNVP--EGFSSLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPT 600 (1099)
Q Consensus 523 ~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 600 (1099)
++..+ ..+..+++|++|++++|+++ .+|..+..+++|+.|++++|+++ .+|..+. ++|++|+|++|++++.+
T Consensus 374 ~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls~N~l~~~~-- 447 (549)
T 2z81_A 374 RSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNNNLDSFS-- 447 (549)
T ss_dssp CCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCSEEECCSSCCSCCC--
T ss_pred cccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhc--CCceEEECCCCChhhhc--
Confidence 75432 45777888888888888887 56777778888888888888887 4454442 58888999999888532
Q ss_pred chhccCcccEEeccCccccccCCcccCCCCCCCEEECcCccccccCChhhhccCCCCeeecCCCcCCCcCC
Q 047739 601 DISHLSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLSGEIP 671 (1099)
Q Consensus 601 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p 671 (1099)
..+++|+.|+|++|+|+ .+|. ...+++|+.|+|++|++++.+|..+..+++|+.|++++|++++..|
T Consensus 448 --~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 448 --LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp --CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred --ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 56788899999999888 6776 4678889999999999988888888889999999999999887665
No 22
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=9e-49 Score=489.86 Aligned_cols=481 Identities=19% Similarity=0.223 Sum_probs=293.4
Q ss_pred cccceEEccCCccCcccCcccccCCcccEEEe-ccccCCCccCcccccC----CCCc--eeec----------ccccCCC
Q 047739 90 RMLRKLSLRSNSFNGTIPATLAQCTLLRAVFL-QYNSLSGNLPANIGNL----SNLE--ILNV----------AANRLSG 152 (1099)
Q Consensus 90 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l-~~n~l~g~~p~~~~~l----~~L~--~L~l----------s~N~l~~ 152 (1099)
.++..|+|++|.+.|.+|+.+++|++|++||| ++|.++|..|-..... +..+ .+.. ....+++
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57899999999999999999999999999999 9999998865432211 0000 0000 0011111
Q ss_pred cc-----------cCCcc--cccceeeCC--CCccCCCCCCCCccccccccccccccccccccccccccccCccccccCc
Q 047739 153 EI-----------ANDLP--RNLKYFDLS--SNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSS 217 (1099)
Q Consensus 153 ~i-----------~~~~~--~~L~~L~ls--~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l~~l~~ 217 (1099)
.+ +.... ..++.+.+. +|+++| +|..|+++++|++|+|++|+|++. .+|..+..
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~-------~i~~~~~~--- 471 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYD-------NIAVDWED--- 471 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGG-------GBSSSCSC---
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCC-------cccccccc---
Confidence 01 00000 123333333 256665 666666666666666666666531 00000000
Q ss_pred eeEEEccCCcCCccChhhhc--CCCCccEEEcccccCCCccCcccccccCCCCCcceEEEeccccccccCCCCCCCCCCc
Q 047739 218 LVHLSAQGNALGGVIPPAIG--ALPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSV 295 (1099)
Q Consensus 218 L~~L~l~~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~ 295 (1099)
++.|.+.+.+|..++ ++++|++|+|++|++.+.+|..+ .. +++
T Consensus 472 -----~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l-~~-----------------------------L~~ 516 (876)
T 4ecn_A 472 -----ANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFL-YD-----------------------------LPE 516 (876)
T ss_dssp -----TTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGG-GG-----------------------------CSS
T ss_pred -----cccccccccCChhhhhccCCCCCEEECcCCCCCccChHHH-hC-----------------------------CCC
Confidence 000111123555544 55555555555555554433211 10 122
Q ss_pred eeEEEcCCCc-ccc-Ccchhcc-------CCCCccEEeCCCCccccCchh--hhCCCCCCCEEEccCCccCccCCccccC
Q 047739 296 LQVLDLQQNQ-IRG-AFPLWLT-------RASTLTRLDVSGNSISGKIPA--QIGGLWRLEELKMANNSFGGAVPVEIKQ 364 (1099)
Q Consensus 296 L~~L~L~~n~-l~~-~~~~~~~-------~l~~L~~L~Ls~N~i~~~~p~--~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 364 (1099)
|++|+|++|+ +++ .+|..+. .+++|++|+|++|.++ .+|. .|+++++|++|+|++|+++ .+| .+..
T Consensus 517 L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~ 593 (876)
T 4ecn_A 517 LQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGT 593 (876)
T ss_dssp CCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCT
T ss_pred CCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcC
Confidence 3333333333 333 2333332 3346666666666666 5555 6666666666666666666 455 5666
Q ss_pred CCCCCEEEccCCcCCCCCCccccCCCC-CCeeeccCccccccCCccCCCCCC--CCEEEcccCcCccccchhhhCCCCCC
Q 047739 365 CSSLSLLDLEGNRFSGEIPEFLGDIRG-LKSLTLAANLFSGSIPASFRNLPG--LENLNLRHNSLSGSLPEEVLGMNNLS 441 (1099)
Q Consensus 365 l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~L~~n~l~~~~~~~~~~l~~--L~~L~L~~N~l~~~~~~~~~~l~~L~ 441 (1099)
+++|++|+|++|+++ .+|..+..+++ |++|+|++|.++ .+|..+..++. |+.|+|++|++++.+|...
T Consensus 594 L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~------- 664 (876)
T 4ecn_A 594 NVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNIS------- 664 (876)
T ss_dssp TSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCS-------
T ss_pred CCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccch-------
Confidence 666666666666666 55555555555 555555555555 34444444332 5555555555544333211
Q ss_pred EEEccCCcCccccCcccC--CCCcccEEEccCCcCCCcCCCC-CCCCCCCCEEEeccCcCcccCCccc--------CCCC
Q 047739 442 TLDLSENKFSGEVPASIG--NLSQLMVFNLSGNAFSGRIPAS-LGNLLKLTTLDLSKQNFSGELPIEL--------AGLP 510 (1099)
Q Consensus 442 ~L~Ls~N~l~~~~~~~l~--~l~~L~~L~L~~N~l~~~~~~~-l~~l~~L~~L~L~~n~l~~~~~~~l--------~~l~ 510 (1099)
..+. .+++|+.|+|++|+++ .+|.. +..+++|+.|+|++|+++ .+|..+ .+++
T Consensus 665 --------------~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~ 728 (876)
T 4ecn_A 665 --------------CSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTY 728 (876)
T ss_dssp --------------SCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGG
T ss_pred --------------hhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccC
Confidence 1111 2235556666666655 33332 235566666666666666 334332 2345
Q ss_pred ccceeeeccccccCCCchhhh--cccccceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEE
Q 047739 511 NLQVIALQENKLSGNVPEGFS--SLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLE 588 (1099)
Q Consensus 511 ~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~ 588 (1099)
+|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++|+ +
T Consensus 729 ~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~------------------~ 788 (876)
T 4ecn_A 729 LLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR------------------D 788 (876)
T ss_dssp GCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCB------------------C
T ss_pred CccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCC------------------C
Confidence 9999999999999 7888887 89999999999999986 78888888999999998887 5
Q ss_pred ecCCcccCcCCcchhccCcccEEeccCccccccCCcccCCCCCCCEEECcCccccccCChhhhccCCCCeeecCCCcCC
Q 047739 589 LRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLS 667 (1099)
Q Consensus 589 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~ 667 (1099)
+++|++.+.+|..+..+++|+.|+|++|++ +.+|..+. ++|+.|+|++|++....+..+.....+..+.|.+|++.
T Consensus 789 ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 789 AEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp TTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTS
T ss_pred cccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCcc
Confidence 678888888999999999999999999999 58888876 69999999999998666777777777888888888876
No 23
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.1e-48 Score=438.68 Aligned_cols=270 Identities=22% Similarity=0.329 Sum_probs=215.9
Q ss_pred CHHHHHHHHhccccccccccccceeEEEEEECC------ceEEEEEECCCCCc--cHHHHHHHHHHhhhccC-CcceEEe
Q 047739 794 TLAETVEATRQFDEENVLSRTRYGLVFKACYND------GMVLSIRRLPDGSL--DENLFRKEAEFLGKVRH-RNLTVLR 864 (1099)
Q Consensus 794 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H-~niv~l~ 864 (1099)
...+++...++|++.+.||+|+||.||+|.+.. ++.||||.+..... ..+.|.+|++++++++| ||||+++
T Consensus 55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 344455567889999999999999999998743 46899999976443 24679999999999965 8999999
Q ss_pred eEEecCCCceEEEEeecCCCCHHHHHhhhcc-----------CCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCC
Q 047739 865 GYYAGAPDLRLLVYDYMPNGNLGTLLQEASH-----------QDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933 (1099)
Q Consensus 865 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~ 933 (1099)
|+|.......++|||||++|+|.++++.... .....++|..+..++.|||+||+|||+.+||||||||+
T Consensus 135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~ 214 (353)
T 4ase_A 135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 214 (353)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCcc
Confidence 9998666667999999999999999986432 12345899999999999999999999999999999999
Q ss_pred CEEECCCCcEEEeccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCc
Q 047739 934 NVLFDADFEAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQD 1012 (1099)
Q Consensus 934 NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~ 1012 (1099)
|||+++++.+||+|||+|+..... .........+||+.|||||++.+..|+.++|||||||++|||+| |+.||.....
T Consensus 215 NILl~~~~~vKi~DFGlar~~~~~-~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~ 293 (353)
T 4ase_A 215 NILLSEKNVVKICDFGLARDIYKD-PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 293 (353)
T ss_dssp GEEECGGGCEEECCCGGGSCTTTC-TTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred ceeeCCCCCEEECcchhhhhcccC-CCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999865322 22233456789999999999999999999999999999999998 9999987554
Q ss_pred hh-HHHHHHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhccc
Q 047739 1013 ED-IVKWVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCR 1081 (1099)
Q Consensus 1013 ~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 1081 (1099)
.+ +...+.. +..... +...+ ..+.+++.+||+.||++||||.||++.|+++.
T Consensus 294 ~~~~~~~i~~----g~~~~~---------p~~~~----~~~~~li~~c~~~dP~~RPt~~eil~~L~~ll 346 (353)
T 4ase_A 294 DEEFCRRLKE----GTRMRA---------PDYTT----PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 346 (353)
T ss_dssp SHHHHHHHHH----TCCCCC---------CTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHc----CCCCCC---------CccCC----HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 33 3333222 211111 11111 12457899999999999999999999998764
No 24
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.7e-48 Score=433.58 Aligned_cols=249 Identities=20% Similarity=0.300 Sum_probs=201.3
Q ss_pred hccccccccccccceeEEEEEEC-CceEEEEEECCCCCc---cHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEE
Q 047739 803 RQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL---DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVY 878 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 878 (1099)
++|++.+.||+|+||+||+|++. +|+.||||++..... ..+.+.+|++++++++|||||++++++.+ ++..|+||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~-~~~~yiVm 102 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEE-NGSLYIVM 102 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEE-CCEEEEEE
Confidence 58999999999999999999975 589999999865433 24678999999999999999999999985 45579999
Q ss_pred eecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCC
Q 047739 879 DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTP 958 (1099)
Q Consensus 879 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 958 (1099)
|||++|+|.+++... ....+++.....++.||+.||+|||+.|||||||||+|||++.++.+||+|||+|+....
T Consensus 103 Ey~~gg~L~~~i~~~---~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~-- 177 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQ---KGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS-- 177 (350)
T ss_dssp ECCTTCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCH--
T ss_pred eCCCCCcHHHHHHHc---CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecC--
Confidence 999999999999753 234578899999999999999999999999999999999999999999999999986521
Q ss_pred CCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcccC
Q 047739 959 AEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLE 1038 (1099)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 1038 (1099)
........+||+.|||||++.+..|+.++||||+||++|||++|+.||......++...+... .... ....+
T Consensus 178 -~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~----~~~~-~~~~~-- 249 (350)
T 4b9d_A 178 -TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISG----SFPP-VSLHY-- 249 (350)
T ss_dssp -HHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT----CCCC-CCTTS--
T ss_pred -CcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcC----CCCC-CCccC--
Confidence 112334578999999999999999999999999999999999999999887766655544432 2111 01111
Q ss_pred CCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1039 LDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
. ..+.+++.+||+.||++|||++|+++
T Consensus 250 ------s----~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 250 ------S----YDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp ------C----HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ------C----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1 12457899999999999999999986
No 25
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1e-47 Score=464.80 Aligned_cols=453 Identities=21% Similarity=0.243 Sum_probs=358.2
Q ss_pred ceeeCCCCccCCCCCCCCccccccccccccccccccccccccccccCccccccCceeEEEccCCcCCccChhhhcCCCCc
Q 047739 163 KYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAIGALPKL 242 (1099)
Q Consensus 163 ~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 242 (1099)
++||+++|+++ .+|..+. ++|++|+|++|+++ +..|..++.+++|++|+|++|++++..|.+|+.+++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~--------~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 71 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYIS--------ELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQEL 71 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCC--------CCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTC
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCccc--------ccChhhccccccccEEecCCCccCCcChHHhhcccCC
Confidence 34555566555 4555444 66666666666665 2223455566777777777777777777778888888
Q ss_pred cEEEcccccCCCccCcccccccCCCCCcceEEEeccccccccCCCCCCCCCCceeEEEcCCCcccc-CcchhccCCCCcc
Q 047739 243 QVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRG-AFPLWLTRASTLT 321 (1099)
Q Consensus 243 ~~L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~~l~~L~ 321 (1099)
++|+|++|+++ .+|.. .+++|++|+|++|++++ .+|..|..+++|+
T Consensus 72 ~~L~Ls~N~l~-~lp~~--------------------------------~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~ 118 (520)
T 2z7x_B 72 EYLDLSHNKLV-KISCH--------------------------------PTVNLKHLDLSFNAFDALPICKEFGNMSQLK 118 (520)
T ss_dssp CEEECCSSCCC-EEECC--------------------------------CCCCCSEEECCSSCCSSCCCCGGGGGCTTCC
T ss_pred CEEecCCCcee-ecCcc--------------------------------ccCCccEEeccCCccccccchhhhccCCcce
Confidence 88888888776 34431 24668888888888877 4678899999999
Q ss_pred EEeCCCCccccCchhhhCCCCCC--CEEEccCCcc--CccCCccccCCC-CCCEEEccCCcCCCCCCc-cccCCCCCCee
Q 047739 322 RLDVSGNSISGKIPAQIGGLWRL--EELKMANNSF--GGAVPVEIKQCS-SLSLLDLEGNRFSGEIPE-FLGDIRGLKSL 395 (1099)
Q Consensus 322 ~L~Ls~N~i~~~~p~~~~~l~~L--~~L~L~~n~l--~~~~~~~l~~l~-~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L 395 (1099)
+|+|++|.|++ ..|..+++| ++|++++|.+ .+..|..+..+. +...+++++|++.+.++. .+.++++|+.|
T Consensus 119 ~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L 195 (520)
T 2z7x_B 119 FLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELS 195 (520)
T ss_dssp EEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEEC
T ss_pred EEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeec
Confidence 99999999875 457777777 9999999999 777888877765 345678899988876654 67789999999
Q ss_pred eccCcc-------ccccCCccCCCCCCCCEEEcccCcCccccchhhh---CCCCCCEEEccCCcCccccCccc-----CC
Q 047739 396 TLAANL-------FSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVL---GMNNLSTLDLSENKFSGEVPASI-----GN 460 (1099)
Q Consensus 396 ~L~~n~-------l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~---~l~~L~~L~Ls~N~l~~~~~~~l-----~~ 460 (1099)
++++|. +.+.++ .+.++++|+.|++++|.+++..+..+. ..++|++|++++|++++.+|..+ ++
T Consensus 196 ~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~ 274 (520)
T 2z7x_B 196 NIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTS 274 (520)
T ss_dssp CEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCC
T ss_pred cccccccccccceeecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhccccc
Confidence 999997 666666 788999999999999998865443332 25689999999999998899888 89
Q ss_pred CCcccEEEccCCcCCCcCC-CCCCCC---CCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhccccc
Q 047739 461 LSQLMVFNLSGNAFSGRIP-ASLGNL---LKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSL 536 (1099)
Q Consensus 461 l~~L~~L~L~~N~l~~~~~-~~l~~l---~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 536 (1099)
+++|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+.... ....+++|+.|++++|++++..|..+..+++|
T Consensus 275 l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 350 (520)
T 2z7x_B 275 LKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTEL 350 (520)
T ss_dssp CCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSC
T ss_pred CceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCC
Confidence 99999999999998 344 344443 67999999999887432 12688899999999999998888999999999
Q ss_pred ceecccccccCC--CCCCcccccceeeEEEccCCcCCCCCCC-CCCCCCCCceEEecCCcccCcCCcchhccCcccEEec
Q 047739 537 RYLNLSFNGFVG--QIPATFSFLRSVVVLSFSGNHISGSIPP-ELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDL 613 (1099)
Q Consensus 537 ~~L~Ls~N~l~~--~~~~~l~~l~~L~~L~ls~N~l~~~~p~-~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 613 (1099)
++|++++|++++ .+|..+..+++|+.|++++|++++.+|. .+..+++|++|++++|++++.+|..+. ++|+.|+|
T Consensus 351 ~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~L 428 (520)
T 2z7x_B 351 ETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDL 428 (520)
T ss_dssp CEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEEC
T ss_pred CEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEEC
Confidence 999999999986 5567788999999999999999975665 478889999999999999877776664 68999999
Q ss_pred cCccccccCCcccCCCCCCCEEECcCccccccCChh-hhccCCCCeeecCCCcCCCcCC
Q 047739 614 SINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDS-LAKLSNLAVLDLSANNLSGEIP 671 (1099)
Q Consensus 614 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~L~ls~N~l~~~~p 671 (1099)
++|+++ .+|..+..+++|+.|+|++|+++ .+|.. +..+++|+.|++++|++++..+
T Consensus 429 s~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 429 HSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp CSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCC
Confidence 999998 78888889999999999999998 56655 8889999999999999987544
No 26
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.7e-47 Score=459.93 Aligned_cols=454 Identities=17% Similarity=0.205 Sum_probs=294.6
Q ss_pred eEEecCCCccccccccccccccccceEEccCCccCcccCcccccCCcccEEEeccccCCCccCcccccCCCCceeecccc
Q 047739 69 TELRLPRLQLSGRISDHLSNLRMLRKLSLRSNSFNGTIPATLAQCTLLRAVFLQYNSLSGNLPANIGNLSNLEILNVAAN 148 (1099)
Q Consensus 69 ~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~N 148 (1099)
+.|++++++++ .||+.+. ++|++|+|++|.+.+..|..+.++++|++|+|++|++++..|..++++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 46888888888 5887776 89999999999999877788999999999999999999888889999999999999999
Q ss_pred cCCCcccCCcccccceeeCCCCccCC-CCCCCCccccccccccccccccccccccccccccCccccccCce--eEEEccC
Q 047739 149 RLSGEIANDLPRNLKYFDLSSNGFSG-PIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSL--VHLSAQG 225 (1099)
Q Consensus 149 ~l~~~i~~~~~~~L~~L~ls~N~l~~-~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l~~l~~L--~~L~l~~ 225 (1099)
+++ .+|..-.++|++|+|++|++++ .+|..|+++++|++|++++|++++ ..++.+++| ++|++++
T Consensus 80 ~l~-~lp~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~-----------~~~~~l~~L~L~~L~l~~ 147 (520)
T 2z7x_B 80 KLV-KISCHPTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK-----------SSVLPIAHLNISKVLLVL 147 (520)
T ss_dssp CCC-EEECCCCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG-----------GGGGGGTTSCEEEEEEEE
T ss_pred cee-ecCccccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch-----------hhccccccceeeEEEeec
Confidence 998 5666644788888888888886 577888888888888888888873 134455566 8888888
Q ss_pred CcC--CccChhhhcCCC-CccEEEcccccCCCccCcccccccCCCCCcceEEEeccccccccCCCCCCCCCCceeEEEcC
Q 047739 226 NAL--GGVIPPAIGALP-KLQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQ 302 (1099)
Q Consensus 226 N~l--~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~ 302 (1099)
|.+ .+..|..|..+. +...+++++|++.+.++...|. .++.|+.|+++
T Consensus 148 n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~-----------------------------~l~~L~~L~l~ 198 (520)
T 2z7x_B 148 GETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVK-----------------------------TVANLELSNIK 198 (520)
T ss_dssp CTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCT-----------------------------TCSEEEECCEE
T ss_pred ccccccccccccccccccceEEEEeccCcchhhhhhhhhh-----------------------------cccceeecccc
Confidence 888 777777776665 3445667777776655543332 24567777777
Q ss_pred CCc-------cccCcchhccCCCCccEEeCCCCccccCchhhhC---CCCCCCEEEccCCccCccCCccc-----cCCCC
Q 047739 303 QNQ-------IRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIG---GLWRLEELKMANNSFGGAVPVEI-----KQCSS 367 (1099)
Q Consensus 303 ~n~-------l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~---~l~~L~~L~L~~n~l~~~~~~~l-----~~l~~ 367 (1099)
+|+ +.+.+| .+..+++|++|++++|.+++..+..+. ..++|++|++++|++++.+|..+ ..+++
T Consensus 199 ~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~ 277 (520)
T 2z7x_B 199 CVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKA 277 (520)
T ss_dssp ECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCE
T ss_pred ccccccccceeecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCce
Confidence 766 555444 566677777777777766643322221 13466777777777666666666 66666
Q ss_pred CCEEEccCCcCCCCCC-ccccCC---CCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEE
Q 047739 368 LSLLDLEGNRFSGEIP-EFLGDI---RGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTL 443 (1099)
Q Consensus 368 L~~L~Ls~N~l~~~~p-~~~~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 443 (1099)
|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+.... .+..+++|++|++++|++++.+|..+..+++|++|
T Consensus 278 L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 353 (520)
T 2z7x_B 278 LSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETL 353 (520)
T ss_dssp EEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEE
T ss_pred eEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEE
Confidence 66666666666 333 333332 34555555555554221 11344555555555555554445555555555555
Q ss_pred EccCCcCccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCc-ccCCCCccceeeeccccc
Q 047739 444 DLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPI-ELAGLPNLQVIALQENKL 522 (1099)
Q Consensus 444 ~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~-~l~~l~~L~~L~L~~N~l 522 (1099)
+|++|++++.. .+|..+.++++|++|++++|++++.+|. .+..+++|+.|++++|++
T Consensus 354 ~L~~N~l~~l~----------------------~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l 411 (520)
T 2z7x_B 354 ILQMNQLKELS----------------------KIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNIL 411 (520)
T ss_dssp ECCSSCCCBHH----------------------HHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCC
T ss_pred EccCCccCccc----------------------cchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCC
Confidence 55555554310 2233344444455555555554442332 244455555555555555
Q ss_pred cCCCchhhhcccccceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCC-CCCCCCCceEEecCCcccCc
Q 047739 523 SGNVPEGFSSLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPE-LGNCSDLEVLELRSNSLTGH 597 (1099)
Q Consensus 523 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~-l~~l~~L~~L~L~~N~l~~~ 597 (1099)
++..|..+. ++|++|++++|+++ .+|..+..+++|+.|++++|+++ .+|.. +..+++|++|++++|.+++.
T Consensus 412 ~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 412 TDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp CGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred Ccchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCccc
Confidence 544444332 46666666666666 55555556677777777777776 34443 77788888888888888753
No 27
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=9.2e-48 Score=428.61 Aligned_cols=249 Identities=22% Similarity=0.330 Sum_probs=206.6
Q ss_pred hccccccccccccceeEEEEEEC-CceEEEEEECCCC-CccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEee
Q 047739 803 RQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDG-SLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDY 880 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e~ 880 (1099)
+.|+..++||+|+||+||+|.++ +|+.||||++... ....+.+.+|++++++++|||||++++++.++ +..|+||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~-~~~~ivmEy 152 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG-DELWVVMEF 152 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEET-TEEEEEECC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-CEEEEEEeC
Confidence 56999999999999999999986 5899999998532 23346789999999999999999999999854 557999999
Q ss_pred cCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCCCC
Q 047739 881 MPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTPAE 960 (1099)
Q Consensus 881 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 960 (1099)
|++|+|.+++.+ ..+++.....++.||+.||+|||+.|||||||||+|||++.++.+||+|||+|+.... .
T Consensus 153 ~~gg~L~~~l~~------~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~---~ 223 (346)
T 4fih_A 153 LEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK---E 223 (346)
T ss_dssp CTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS---S
T ss_pred CCCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCC---C
Confidence 999999999975 2389999999999999999999999999999999999999999999999999986522 2
Q ss_pred CccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcccCCC
Q 047739 961 ASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLELD 1040 (1099)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 1040 (1099)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||......+....+..... +.+....
T Consensus 224 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~---------~~~~~~~ 294 (346)
T 4fih_A 224 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---------PRLKNLH 294 (346)
T ss_dssp SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC---------CCCSCGG
T ss_pred CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC---------CCCCccc
Confidence 2344567999999999999999999999999999999999999999987766655554443211 0110000
Q ss_pred CCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1041 PESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
.-+ ..+.+++.+||+.||++|||++|+++.
T Consensus 295 ~~s------~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 295 KVS------PSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp GSC------HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cCC------HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 000 124578999999999999999999873
No 28
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=8.7e-48 Score=427.65 Aligned_cols=254 Identities=19% Similarity=0.242 Sum_probs=204.1
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEee
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDY 880 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e~ 880 (1099)
.+.|+..++||+|+||.||+|+++ +|+.||||++..... ..+|++++++++|||||++++++.+ +...|+||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~HpnIV~l~~~~~~-~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSSPRIVPLYGAVRE-GPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCCTTBCCEEEEEEE-TTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEEec
Confidence 356888899999999999999986 589999999965332 3579999999999999999999985 4556999999
Q ss_pred cCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCC-cEEEeccccccccCCCCC
Q 047739 881 MPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADF-EAHLSDFGLDRLTIPTPA 959 (1099)
Q Consensus 881 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~-~~kl~DfGla~~~~~~~~ 959 (1099)
|++|+|.+++++. ..+++.....++.||+.||+|||+.+||||||||+|||++.++ .+||+|||+|+.......
T Consensus 132 ~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~ 206 (336)
T 4g3f_A 132 LEGGSLGQLIKQM-----GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 206 (336)
T ss_dssp CTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-----
T ss_pred cCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCc
Confidence 9999999999864 2489999999999999999999999999999999999999987 699999999987633221
Q ss_pred CC--ccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCccc
Q 047739 960 EA--STSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLL 1037 (1099)
Q Consensus 960 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1037 (1099)
.. ......+||+.|||||++.+..|+.++||||+||++|||++|+.||......++...+..... .. ..+.+.+
T Consensus 207 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~--~~-~~~~~~~- 282 (336)
T 4g3f_A 207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPP--PI-REIPPSC- 282 (336)
T ss_dssp -------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCC--GG-GGSCTTS-
T ss_pred ccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCC--Cc-hhcCccC-
Confidence 11 123446899999999999999999999999999999999999999987666555554443210 00 0111111
Q ss_pred CCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcc
Q 047739 1038 ELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGC 1080 (1099)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~ 1080 (1099)
. ..+.+++.+||+.||++|||+.|+++.|+..
T Consensus 283 -------s----~~~~~li~~~L~~dP~~R~sa~el~~~l~~~ 314 (336)
T 4g3f_A 283 -------A----PLTAQAIQEGLRKEPVHRASAMELRRKVGKA 314 (336)
T ss_dssp -------C----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -------C----HHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence 1 1245789999999999999999999887654
No 29
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=7e-48 Score=428.36 Aligned_cols=269 Identities=21% Similarity=0.250 Sum_probs=201.3
Q ss_pred hccccccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecCCC---ceEEEEe
Q 047739 803 RQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPD---LRLLVYD 879 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~---~~~lV~e 879 (1099)
++|.+.++||+|+||+||+|+++ |+.||||++.........+++|+..+.+++|||||+++|++.+... ..|+|||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 56888999999999999999985 8899999996544333444566777788999999999999985432 4689999
Q ss_pred ecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccC--------CceecCCCCCCEEECCCCcEEEeccccc
Q 047739 880 YMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTS--------NMVHGDIKPQNVLFDADFEAHLSDFGLD 951 (1099)
Q Consensus 880 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~--------~iiH~Dlk~~NIll~~~~~~kl~DfGla 951 (1099)
||++|+|.++++. ..++|..+.+++.|+|+||+|||+. +||||||||+|||+|.++.+||+|||+|
T Consensus 82 y~~~gsL~~~l~~------~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla 155 (303)
T 3hmm_A 82 YHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp CCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred CCCCCcHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence 9999999999975 2489999999999999999999987 9999999999999999999999999999
Q ss_pred cccCCCCCC-CccccccccCccccCccccccC------CCCCcCchhhHHHHHHHHHhCCCCCCCCCch-----------
Q 047739 952 RLTIPTPAE-ASTSTTAVGTLGYVSPEAALTG------ETTKESDVYSFGIVLLELLTGKRPVMFTQDE----------- 1013 (1099)
Q Consensus 952 ~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DV~S~G~il~elltg~~P~~~~~~~----------- 1013 (1099)
+........ .......+||+.|||||++.+. .++.++|||||||++|||+||+.||....+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3hmm_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence 865322211 1223456899999999998754 3678999999999999999998776432211
Q ss_pred hHHHHHHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCCC
Q 047739 1014 DIVKWVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPD 1085 (1099)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 1085 (1099)
.....+.+.+..... ++.+. ......+....+.+++.+||+.||++||||.||++.|+++....+
T Consensus 236 ~~~~~~~~~~~~~~~----rp~~p---~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~~ 300 (303)
T 3hmm_A 236 PSVEEMRKVVCEQKL----RPNIP---NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp CCHHHHHHHHTTSCC----CCCCC---GGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred chHHHHHHHHhcccC----CCCCC---ccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHcC
Confidence 011222222222211 11111 111112233445789999999999999999999999998866543
No 30
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=4.9e-46 Score=462.10 Aligned_cols=560 Identities=21% Similarity=0.218 Sum_probs=318.1
Q ss_pred CCCCCCCCCCCCCCCCCCCcccceEecCCcEeEEecCCCccccccccccccccccceEEccCCccCcccCcccccCCccc
Q 047739 38 HDPLGALNGWDSSTPAAPCDWRGVACTNNRVTELRLPRLQLSGRISDHLSNLRMLRKLSLRSNSFNGTIPATLAQCTLLR 117 (1099)
Q Consensus 38 ~~~~~~l~~w~~~~~~~~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~ 117 (1099)
.|+...+++|+.+. |..|+.-.|....+ +.+=++.+|+ .||+.+- +.+++||||+|++++..|..|.++++|+
T Consensus 7 ~~~~~~~~~~~~~~---p~~~~~c~~~~~~~-~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~ 79 (635)
T 4g8a_A 7 KDDDDKLAAANSSI---PESWEPCVEVVPNI-TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQ 79 (635)
T ss_dssp ---------------------CCSEEEETTT-EEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred CCCcchhhcccCCC---CCCCCCccccCCCC-EEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCC
Confidence 45666778887533 44454433321110 1122233333 3554432 4789999999999976677899999999
Q ss_pred EEEeccccCCCccCcccccCCCCceeecccccCCCcccCCcc--cccceeeCCCCccCCCCCCCCccccccccccccccc
Q 047739 118 AVFLQYNSLSGNLPANIGNLSNLEILNVAANRLSGEIANDLP--RNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNK 195 (1099)
Q Consensus 118 ~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~N~l~~~i~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~ 195 (1099)
+|||++|+|++..|..|+++++|++|+|++|++++..+..+. ++|++|+|++|+|++..+..|+++++|++|+|++|+
T Consensus 80 ~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~ 159 (635)
T 4g8a_A 80 VLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNL 159 (635)
T ss_dssp EEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCc
Confidence 999999999987777899999999998888888754433333 455556666665555444555555555555555555
Q ss_pred cccccccccccccCccccccCceeEEEccCCcCCccChhhhcCCCCccEEEcccccCCCccCcccccccCCCCCcceEEE
Q 047739 196 FSREVPATFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQ 275 (1099)
Q Consensus 196 l~~~~~~~~~g~lp~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~ 275 (1099)
++. ..+|..++.+++|++|++++|++++..+..|..+.+++
T Consensus 160 l~~-------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~-------------------------------- 200 (635)
T 4g8a_A 160 IQS-------FKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMP-------------------------------- 200 (635)
T ss_dssp CCC-------CCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCT--------------------------------
T ss_pred ccc-------CCCchhhccchhhhhhcccCccccccccccccchhhhh--------------------------------
Confidence 542 12344444555555555555555554444443332221
Q ss_pred eccccccccCCCCCCCCCCceeEEEcCCCccccCcchhccCCCCccEEeCCCCcccc-CchhhhCCCCCCCEEEccCCcc
Q 047739 276 LGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISG-KIPAQIGGLWRLEELKMANNSF 354 (1099)
Q Consensus 276 l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~-~~p~~~~~l~~L~~L~L~~n~l 354 (1099)
.....++++.|.++.+.+..+. ...+..+++++|.... ..+..+.++..++...+..+..
T Consensus 201 ------------------~~~~~~~ls~n~l~~i~~~~~~-~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~ 261 (635)
T 4g8a_A 201 ------------------LLNLSLDLSLNPMNFIQPGAFK-EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEF 261 (635)
T ss_dssp ------------------TCCCEEECTTCCCCEECTTTTT-TCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECC
T ss_pred ------------------hhhhhhhcccCcccccCccccc-chhhhhhhhhcccccccccchhhcCCccccccccccccc
Confidence 1122344444444433333222 2334555665554432 2334455566665555543322
Q ss_pred ------CccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCcc
Q 047739 355 ------GGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSG 428 (1099)
Q Consensus 355 ------~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 428 (1099)
.......+..+..+..+++..+...... ......+..+.+++.+++.+|.+..
T Consensus 262 ~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------------------~~~~~~~~~~~~l~~l~~~~~~~~~ 320 (635)
T 4g8a_A 262 RNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYL---------------------DGIIDLFNCLTNVSSFSLVSVTIER 320 (635)
T ss_dssp TTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCE---------------------EECTTTTGGGTTCSEEEEESCEEEE
T ss_pred ccccccccccccccccccchhhhhhhhhhhcccc---------------------cchhhhhhhhccccccccccccccc
Confidence 2122333344444444444444332111 1112223334455555555555542
Q ss_pred ccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCc--ccCCccc
Q 047739 429 SLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFS--GELPIEL 506 (1099)
Q Consensus 429 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~--~~~~~~l 506 (1099)
. ..+.....|+.|++.+|.+....+. .+..|+.+++.+|.+... ....++++|+.|++++|.+. +..+..+
T Consensus 321 ~--~~~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~ 393 (635)
T 4g8a_A 321 V--KDFSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSD 393 (635)
T ss_dssp C--GGGGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHH
T ss_pred c--cccccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCCC--cccccccccccchhhccccccccccccch
Confidence 2 2234445566666666655533222 234555666666655422 23345666666666666664 2334455
Q ss_pred CCCCccceeeeccccccCCCchhhhcccccceecccccccCCCCC-CcccccceeeEEEccCCcCCCCCCCCCCCCCCCc
Q 047739 507 AGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIP-ATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLE 585 (1099)
Q Consensus 507 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~ 585 (1099)
..+.+|+.+++..|.+. ..+..+..+++|+.++++.|......+ ..+..+++++.+++++|++.+..+..+..+++|+
T Consensus 394 ~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~ 472 (635)
T 4g8a_A 394 FGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLE 472 (635)
T ss_dssp HSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCC
T ss_pred hhhhhhhhhhccccccc-cccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhh
Confidence 56666777777766665 334456666777777777666554433 4566677777777777777777777777777777
Q ss_pred eEEecCCcc-cCcCCcchhccCcccEEeccCccccccCCcccCCCCCCCEEECcCccccccCChhhhccCCCCeeecCCC
Q 047739 586 VLELRSNSL-TGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSAN 664 (1099)
Q Consensus 586 ~L~L~~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N 664 (1099)
.|+|++|++ .+..|..+..+++|+.|||++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|||++|
T Consensus 473 ~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N 552 (635)
T 4g8a_A 473 VLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLN 552 (635)
T ss_dssp EEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTS
T ss_pred hhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCC
Confidence 777777764 3346667777777777777777777767777777777777777777777766777777777777777777
Q ss_pred cCCCcCCCCcccc-ccccccccCCCCcc
Q 047739 665 NLSGEIPANLSSI-FGLMNFNVSSNNLQ 691 (1099)
Q Consensus 665 ~l~~~~p~~~~~~-~~l~~l~l~~n~~~ 691 (1099)
+|++..|..+..+ .+|+.+++++|++.
T Consensus 553 ~l~~~~~~~l~~l~~~L~~L~L~~Np~~ 580 (635)
T 4g8a_A 553 HIMTSKKQELQHFPSSLAFLNLTQNDFA 580 (635)
T ss_dssp CCCBCCSSCTTCCCTTCCEEECTTCCBC
T ss_pred cCCCCCHHHHHhhhCcCCEEEeeCCCCc
Confidence 7777777777666 46777777666554
No 31
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=5.9e-48 Score=423.60 Aligned_cols=247 Identities=19% Similarity=0.306 Sum_probs=207.3
Q ss_pred hccccccccccccceeEEEEEEC-CceEEEEEECCCC----CccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEE
Q 047739 803 RQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDG----SLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLV 877 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 877 (1099)
++|++.++||+|+||+||+|+.. +|+.||+|.+... ....+.+.+|++++++++|||||++++++.+ ++..|+|
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-~~~~yiv 110 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD-DEKLYFG 110 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEEEE
Confidence 57999999999999999999975 5899999998532 2234679999999999999999999999985 4567999
Q ss_pred EeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCC
Q 047739 878 YDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPT 957 (1099)
Q Consensus 878 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 957 (1099)
|||+++|+|.+++.+. ..+++.....++.||+.||+|||+++|+||||||+|||++.++.+||+|||+|+.....
T Consensus 111 mEy~~gG~L~~~i~~~-----~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKI-----GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185 (311)
T ss_dssp ECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence 9999999999999864 24899999999999999999999999999999999999999999999999999876322
Q ss_pred CCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCccc
Q 047739 958 PAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLL 1037 (1099)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1037 (1099)
.........+||+.|||||++.+..|+.++||||+||++|||++|+.||...+..++...+... .+. ++..+
T Consensus 186 -~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~----~~~--~p~~~- 257 (311)
T 4aw0_A 186 -SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL----EYD--FPEKF- 257 (311)
T ss_dssp -TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT----CCC--CCTTC-
T ss_pred -CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC----CCC--CCccc-
Confidence 2233455679999999999999999999999999999999999999999877766665555432 110 11111
Q ss_pred CCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHH
Q 047739 1038 ELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIV 1074 (1099)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl 1074 (1099)
. ..+.+++.+|++.||++|||++|+.
T Consensus 258 -------s----~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 258 -------F----PKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp -------C----HHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred -------C----HHHHHHHHHHccCCHhHCcChHHHc
Confidence 1 1245799999999999999999864
No 32
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.3e-47 Score=417.43 Aligned_cols=245 Identities=22% Similarity=0.353 Sum_probs=195.7
Q ss_pred cccccccccccceeEEEEEEC-CceEEEEEECCCCC---ccHHHHHHHHHHhhhccCCcceEEeeEEecC---CCceEEE
Q 047739 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS---LDENLFRKEAEFLGKVRHRNLTVLRGYYAGA---PDLRLLV 877 (1099)
Q Consensus 805 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---~~~~~lV 877 (1099)
|...++||+|+||+||+|.+. ++..||+|.+.... ...+.|.+|++++++++|||||++++++.+. +...|+|
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 356678999999999999986 48899999985432 2346799999999999999999999998642 3446899
Q ss_pred EeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCC--ceecCCCCCCEEECC-CCcEEEecccccccc
Q 047739 878 YDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSN--MVHGDIKPQNVLFDA-DFEAHLSDFGLDRLT 954 (1099)
Q Consensus 878 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~--iiH~Dlk~~NIll~~-~~~~kl~DfGla~~~ 954 (1099)
||||++|+|.+++++. ..+++.....++.||++||+|||+++ ||||||||+|||++. ++.+||+|||+|+..
T Consensus 108 mEy~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EeCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence 9999999999999864 34899999999999999999999998 999999999999984 799999999999854
Q ss_pred CCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccC
Q 047739 955 IPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEP 1034 (1099)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1034 (1099)
. .......+||+.|||||++.+ .|+.++|||||||++|||+||+.||........ +...+..+..+..++.
T Consensus 183 ~-----~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~---~~~~i~~~~~~~~~~~ 253 (290)
T 3fpq_A 183 R-----ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ---IYRRVTSGVKPASFDK 253 (290)
T ss_dssp C-----TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH---HHHHHTTTCCCGGGGG
T ss_pred C-----CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH---HHHHHHcCCCCCCCCc
Confidence 2 223456789999999998865 699999999999999999999999975443322 1122222211111111
Q ss_pred cccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1035 GLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
.. . ..+.+++.+||+.||++|||++|+++
T Consensus 254 ~~--------~----~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 254 VA--------I----PEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CC--------C----HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cC--------C----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11 0 12457899999999999999999986
No 33
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.2e-46 Score=429.81 Aligned_cols=248 Identities=22% Similarity=0.333 Sum_probs=207.0
Q ss_pred hccccccccccccceeEEEEEEC-CceEEEEEECCCCC-ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEee
Q 047739 803 RQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS-LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDY 880 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e~ 880 (1099)
+.|+..+.||+|+||.||+|.++ +|+.||||++.... ...+.+.+|+++|++++|||||++++++.+. +..|+||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~-~~~~iVmEy 229 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG-DELWVVMEF 229 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEET-TEEEEEEEC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEEC-CEEEEEEeC
Confidence 56999999999999999999986 58999999985433 3456799999999999999999999999854 567999999
Q ss_pred cCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCCCC
Q 047739 881 MPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTPAE 960 (1099)
Q Consensus 881 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 960 (1099)
|++|+|.++++. ..+++.....++.||+.||+|||+.|||||||||+|||++.++.+||+|||+|+.... .
T Consensus 230 ~~gG~L~~~i~~------~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~---~ 300 (423)
T 4fie_A 230 LEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK---E 300 (423)
T ss_dssp CTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCS---S
T ss_pred CCCCcHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCC---C
Confidence 999999999974 2389999999999999999999999999999999999999999999999999986522 2
Q ss_pred CccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcccCCC
Q 047739 961 ASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLELD 1040 (1099)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 1040 (1099)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||......+....+..... +.+....
T Consensus 301 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~---------~~~~~~~ 371 (423)
T 4fie_A 301 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---------PRLKNLH 371 (423)
T ss_dssp CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC---------CCCSCTT
T ss_pred CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC---------CCCcccc
Confidence 2344567999999999999999999999999999999999999999987766665554443211 1111000
Q ss_pred CCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1041 PESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
.-+ ..+.+++.+||+.||++|||+.|+++
T Consensus 372 ~~s------~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 372 KVS------PSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp SSC------HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCC------HHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 011 12457899999999999999999987
No 34
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.3e-46 Score=407.70 Aligned_cols=244 Identities=19% Similarity=0.290 Sum_probs=190.3
Q ss_pred hccccccccccccceeEEEEEEC-CceEEEEEECCCCC----ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEE
Q 047739 803 RQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS----LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLV 877 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 877 (1099)
.+|++.+.||+|+||+||+|... +|+.||+|.+.... ...+.+.+|++++++++|||||++++++.+ ++..|+|
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-~~~~~iv 91 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS-KDEIIMV 91 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-CCEEEEE
Confidence 57999999999999999999975 58999999985432 224679999999999999999999999985 4567999
Q ss_pred EeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCC
Q 047739 878 YDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPT 957 (1099)
Q Consensus 878 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 957 (1099)
|||+ +|+|.+++.+. ..+++.....++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus 92 mEy~-~g~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~- 164 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD- 164 (275)
T ss_dssp EECC-CEEHHHHHHHS-----CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred EeCC-CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCC-
Confidence 9999 68999999753 3489999999999999999999999999999999999999999999999999986522
Q ss_pred CCCCccccccccCccccCccccccCCC-CCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcc
Q 047739 958 PAEASTSTTAVGTLGYVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGL 1036 (1099)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1036 (1099)
.......+||+.|||||++.+..+ +.++||||+||++|||++|+.||......++.+.+... ... ++..+
T Consensus 165 ---~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~----~~~--~p~~~ 235 (275)
T 3hyh_A 165 ---GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG----VYT--LPKFL 235 (275)
T ss_dssp -------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT----CCC--CCTTS
T ss_pred ---CCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC----CCC--CCCCC
Confidence 223445789999999999998876 57999999999999999999999876665555544332 110 11111
Q ss_pred cCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1037 LELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
+ ..+.+++.+||+.||++|||++|+++
T Consensus 236 --------s----~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 236 --------S----PGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp --------C----HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred --------C----HHHHHHHHHHccCChhHCcCHHHHHc
Confidence 1 12357899999999999999999987
No 35
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=9.3e-47 Score=414.47 Aligned_cols=246 Identities=23% Similarity=0.346 Sum_probs=197.2
Q ss_pred hccccccccccccceeEEEEEEC----CceEEEEEECCCCCc---cHHHHHHHHHHhhhccCCcceEEeeEEecCCCceE
Q 047739 803 RQFDEENVLSRTRYGLVFKACYN----DGMVLSIRRLPDGSL---DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 875 (1099)
++|++.+.||+|+||+||+|+.. .++.||+|.+..... +...+.+|++++++++|||||++++++.+ ++..|
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-~~~~~ 102 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT-EGKLY 102 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEE-TTEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-CCEEE
Confidence 57999999999999999999863 468999999864322 23568899999999999999999999985 45579
Q ss_pred EEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccC
Q 047739 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTI 955 (1099)
Q Consensus 876 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 955 (1099)
+|||||++|+|.+++.+. ..+++.....++.||+.||+|||+.||+||||||+|||++.++.+||+|||+|+...
T Consensus 103 ivmEy~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 177 (304)
T 3ubd_A 103 LILDFLRGGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI 177 (304)
T ss_dssp EEECCCTTCEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred EEEEcCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence 999999999999999864 248999999999999999999999999999999999999999999999999998642
Q ss_pred CCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCc
Q 047739 956 PTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPG 1035 (1099)
Q Consensus 956 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1035 (1099)
. ........+||+.|||||++.+..|+.++||||+||++|||+||+.||...+..++...+.+. ... +.+.
T Consensus 178 ~---~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~----~~~--~p~~ 248 (304)
T 3ubd_A 178 D---HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA----KLG--MPQF 248 (304)
T ss_dssp ------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC----CCC--CCTT
T ss_pred C---CCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcC----CCC--CCCc
Confidence 2 223345678999999999999999999999999999999999999999887766665555432 110 0110
Q ss_pred ccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCH-----HHHHH
Q 047739 1036 LLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTM-----SDIVF 1075 (1099)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~-----~evl~ 1075 (1099)
.. ..+.+++.+||+.||++|||+ +|+++
T Consensus 249 --------~s----~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 249 --------LS----PEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp --------SC----HHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred --------CC----HHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 11 124579999999999999984 66664
No 36
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=6.5e-44 Score=442.99 Aligned_cols=523 Identities=21% Similarity=0.199 Sum_probs=353.3
Q ss_pred cceEecC-----------CcEeEEecCCCccccccccccccccccceEEccCCccCcccCcccccCCcccEEEeccccCC
Q 047739 59 RGVACTN-----------NRVTELRLPRLQLSGRISDHLSNLRMLRKLSLRSNSFNGTIPATLAQCTLLRAVFLQYNSLS 127 (1099)
Q Consensus 59 ~gv~c~~-----------~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~ 127 (1099)
.-|.|++ ..++.|||++|.+++--+..+.+|++|++|||++|++++..|..|++|++|++|+|++|+|+
T Consensus 34 ~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~ 113 (635)
T 4g8a_A 34 ITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 113 (635)
T ss_dssp TEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred CEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC
Confidence 3577874 35899999999999776778999999999999999999777788999999999999999999
Q ss_pred CccCcccccCCCCceeecccccCCCcccCCcc--cccceeeCCCCccCC-CCCCCCcccccccccccccccccccccccc
Q 047739 128 GNLPANIGNLSNLEILNVAANRLSGEIANDLP--RNLKYFDLSSNGFSG-PIPTSISNLSQLQLINFSFNKFSREVPATF 204 (1099)
Q Consensus 128 g~~p~~~~~l~~L~~L~ls~N~l~~~i~~~~~--~~L~~L~ls~N~l~~-~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~ 204 (1099)
+..|..++++++|++|+|++|++++..+..+. ++|++|+|++|++++ .+|..++++++|++|+|++|++++..+.
T Consensus 114 ~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-- 191 (635)
T 4g8a_A 114 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT-- 191 (635)
T ss_dssp EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG--
T ss_pred CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccc--
Confidence 87778899999999999999999987666665 799999999999986 5788899999999999999999955443
Q ss_pred ccccCccccccCc----eeEEEccCCcCCccChhhhcCCCCccEEEcccccCCCccCcccccccCCCCCcceEEEecccc
Q 047739 205 EGTLPSAIANCSS----LVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNA 280 (1099)
Q Consensus 205 ~g~lp~~l~~l~~----L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n~ 280 (1099)
.+..+.+ +..++++.|.++.+.+..+. ...++.+++..|..+..++...|..+ ..++...+..+.
T Consensus 192 ------~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~-~~~~~~l~l~~n~~~~~~~~~~~~~l----~~l~~~~l~~~~ 260 (635)
T 4g8a_A 192 ------DLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLHKLTLRNNFDSLNVMKTCIQGL----AGLEVHRLVLGE 260 (635)
T ss_dssp ------GGHHHHTCTTCCCEEECTTCCCCEECTTTTT-TCEEEEEEEESCCSSHHHHHHHHHTT----TTCEEEEEEEEC
T ss_pred ------cccchhhhhhhhhhhhcccCcccccCccccc-chhhhhhhhhcccccccccchhhcCC----cccccccccccc
Confidence 3333333 35789999999877666554 45678899999887755555444442 223333332222
Q ss_pred ccccCCCCCCCCCCceeEEEcCCCccccCcchhccCCCCccEEeCCCCcccc---CchhhhCCCCCCCEEEccCCccCcc
Q 047739 281 FTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISG---KIPAQIGGLWRLEELKMANNSFGGA 357 (1099)
Q Consensus 281 ~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~---~~p~~~~~l~~L~~L~L~~n~l~~~ 357 (1099)
.... ..+.......+.....+..+++..+.... ..+..+..+.+++.+.+.++.+...
T Consensus 261 ~~~~-------------------~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~ 321 (635)
T 4g8a_A 261 FRNE-------------------GNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERV 321 (635)
T ss_dssp CTTS-------------------CCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEEC
T ss_pred cccc-------------------cccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccc
Confidence 2111 11112222333444445555544433221 2233445556667777766666532
Q ss_pred CCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCcc--ccchhhh
Q 047739 358 VPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSG--SLPEEVL 435 (1099)
Q Consensus 358 ~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~ 435 (1099)
..+....+|+.|++++|.+....+. .+..|+.+++..|.+... ..+..+++|+.|++++|.+.. ..+..+.
T Consensus 322 --~~~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~ 394 (635)
T 4g8a_A 322 --KDFSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDF 394 (635)
T ss_dssp --GGGGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHH
T ss_pred --cccccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCCC--cccccccccccchhhccccccccccccchh
Confidence 2344556677777777766533322 244556666666655432 233456667777777766642 2345555
Q ss_pred CCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCcccee
Q 047739 436 GMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVI 515 (1099)
Q Consensus 436 ~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 515 (1099)
.+.+|+.|+++.|.+. ..+..+..+++|+.+++.+|......+ +..+..+++++.+
T Consensus 395 ~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~-----------------------~~~~~~l~~l~~l 450 (635)
T 4g8a_A 395 GTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSE-----------------------FSVFLSLRNLIYL 450 (635)
T ss_dssp SCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTS-----------------------SCTTTTCTTCCEE
T ss_pred hhhhhhhhhccccccc-cccccccccccccchhhhhcccccccc-----------------------ccccccccccccc
Confidence 6666666666666655 233445555556666555554443322 1223444444555
Q ss_pred eeccccccCCCchhhhcccccceecccccccC-CCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcc
Q 047739 516 ALQENKLSGNVPEGFSSLMSLRYLNLSFNGFV-GQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSL 594 (1099)
Q Consensus 516 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l 594 (1099)
+++.|.+.+..+..+..+++|++|++++|.+. +..|..|..+++|+.|+|++|++++..|..|+++++|++|+|++|+|
T Consensus 451 ~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l 530 (635)
T 4g8a_A 451 DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 530 (635)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred cccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcC
Confidence 55555555445555555566666666666532 34566667777777777777777777777888888888888888888
Q ss_pred cCcCCcchhccCcccEEeccCccccccCCcccCCC-CCCCEEECcCccccc
Q 047739 595 TGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKC-SSLRSLLVNSNHLSG 644 (1099)
Q Consensus 595 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~ 644 (1099)
++..|..+..+++|+.|||++|+|++..|..+..+ ++|+.|+|++|++..
T Consensus 531 ~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 531 FSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp CBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCC
T ss_pred CCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcc
Confidence 87777778888888888888888888878888877 578888888888863
No 37
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.3e-45 Score=404.53 Aligned_cols=257 Identities=23% Similarity=0.358 Sum_probs=189.0
Q ss_pred hccccccccccccceeEEEEEEC-CceEEEEEECCCCC--ccHHHHHHHHHHhhhccCCcceEEeeEEecCCC-------
Q 047739 803 RQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS--LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPD------- 872 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------- 872 (1099)
.+|++.+.||+|+||+||+|+++ +|+.||+|++.... ...+.+.+|++++++++|||||++++++.+...
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 46999999999999999999985 58999999985433 234678999999999999999999999864332
Q ss_pred ----ceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecc
Q 047739 873 ----LRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDF 948 (1099)
Q Consensus 873 ----~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~Df 948 (1099)
..|+||||+++|+|.++++.... ....++...+.++.||++||+|||++||+||||||+|||++.++.+||+||
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DF 162 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCT--IEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDF 162 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCS--GGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCC--CChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccC
Confidence 35899999999999999985322 223566778899999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCC---------CccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHH
Q 047739 949 GLDRLTIPTPAE---------ASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWV 1019 (1099)
Q Consensus 949 Gla~~~~~~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~ 1019 (1099)
|+|+........ ....+..+||+.|||||++.+..|+.++||||+||++|||++ ||... .+....+
T Consensus 163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~--~~~~~~~ 237 (299)
T 4g31_A 163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ--MERVRTL 237 (299)
T ss_dssp CCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH--HHHHHHH
T ss_pred ccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc--cHHHHHH
Confidence 999875322111 112345689999999999999999999999999999999996 77532 1212211
Q ss_pred HHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH--Hhhcc
Q 047739 1020 KKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF--MLEGC 1080 (1099)
Q Consensus 1020 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~--~L~~~ 1080 (1099)
. .......+... ........+++.+||+.||++|||+.|+++ .++++
T Consensus 238 ~-~~~~~~~p~~~-------------~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 286 (299)
T 4g31_A 238 T-DVRNLKFPPLF-------------TQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDL 286 (299)
T ss_dssp H-HHHTTCCCHHH-------------HHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC
T ss_pred H-HHhcCCCCCCC-------------cccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCC
Confidence 1 11222111110 011122357899999999999999999987 44433
No 38
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.2e-44 Score=441.71 Aligned_cols=414 Identities=19% Similarity=0.206 Sum_probs=287.2
Q ss_pred cccCceeEEEccCCcCCccChhhhcCCCCccEEEcccccCCCccCcccccccCCCCCcceEEEeccccccccCCCCCCCC
Q 047739 213 ANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSC 292 (1099)
Q Consensus 213 ~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~ 292 (1099)
+.+++|++|+|++|++++..|.+|+.+++|++|+|++|+++ .+|.. .
T Consensus 73 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--------------------------------~ 119 (562)
T 3a79_B 73 SFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--------------------------------P 119 (562)
T ss_dssp TTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--------------------------------C
T ss_pred ccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--------------------------------c
Confidence 33444444444444444444555555566666666666554 23321 1
Q ss_pred CCceeEEEcCCCccccC-cchhccCCCCccEEeCCCCccccCchhhhCCCCCC--CEEEccCCcc--CccCCccccCCC-
Q 047739 293 SSVLQVLDLQQNQIRGA-FPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRL--EELKMANNSF--GGAVPVEIKQCS- 366 (1099)
Q Consensus 293 ~~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L--~~L~L~~n~l--~~~~~~~l~~l~- 366 (1099)
+++|++|+|++|++++. +|..|.++++|++|+|++|++++. .+.++++| ++|++++|.+ ++..|..+..+.
T Consensus 120 l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~ 196 (562)
T 3a79_B 120 MASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNT 196 (562)
T ss_dssp CTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCE
T ss_pred cccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCc
Confidence 34456666666666552 356677777777777777777643 34444444 7777777777 666777766654
Q ss_pred -CCCEEEccCCcCCCCCCc-cccCCCCCCeeeccCcccc----ccCCccCCCCCCCCEEEcccCcCccccchh---hhCC
Q 047739 367 -SLSLLDLEGNRFSGEIPE-FLGDIRGLKSLTLAANLFS----GSIPASFRNLPGLENLNLRHNSLSGSLPEE---VLGM 437 (1099)
Q Consensus 367 -~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~n~l~----~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~---~~~l 437 (1099)
.+ .+++++|.+.+.++. .+..+++|+.|++++|+.. ......+.++++|+.|+++++.+.+..... ....
T Consensus 197 ~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~ 275 (562)
T 3a79_B 197 TVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWP 275 (562)
T ss_dssp EEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTT
T ss_pred ceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhc
Confidence 33 557778877765554 4566777888888877421 112234667788888888877766432111 1234
Q ss_pred CCCCEEEccCCcCccccCccc-----CCCCcccEEEccCCcCCCcCC-CCCCC---CCCCCEEEeccCcCcccCCcccCC
Q 047739 438 NNLSTLDLSENKFSGEVPASI-----GNLSQLMVFNLSGNAFSGRIP-ASLGN---LLKLTTLDLSKQNFSGELPIELAG 508 (1099)
Q Consensus 438 ~~L~~L~Ls~N~l~~~~~~~l-----~~l~~L~~L~L~~N~l~~~~~-~~l~~---l~~L~~L~L~~n~l~~~~~~~l~~ 508 (1099)
.+|++|++++|.+++.+|..+ .+++.|+.++++.|.+ .+| ..+.. ..+|++|++++|.+.... ....
T Consensus 276 ~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~ 351 (562)
T 3a79_B 276 RPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPS 351 (562)
T ss_dssp SSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSS
T ss_pred ccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEccCCCccccc--CccC
Confidence 588889999888888888777 7777788888877776 233 22222 256888889888876322 1267
Q ss_pred CCccceeeeccccccCCCchhhhcccccceecccccccCCC--CCCcccccceeeEEEccCCcCCCCCCC-CCCCCCCCc
Q 047739 509 LPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQ--IPATFSFLRSVVVLSFSGNHISGSIPP-ELGNCSDLE 585 (1099)
Q Consensus 509 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~~~~l~~l~~L~~L~ls~N~l~~~~p~-~l~~l~~L~ 585 (1099)
+++|+.|++++|++++..|..+..+++|++|++++|++++. +|..+..+++|+.|++++|++++.+|. .+..+++|+
T Consensus 352 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 78888888888888887888888888888899988888863 346688888888888888888874554 577888899
Q ss_pred eEEecCCcccCcCCcchhccCcccEEeccCccccccCCcccCCCCCCCEEECcCccccccCChh-hhccCCCCeeecCCC
Q 047739 586 VLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDS-LAKLSNLAVLDLSAN 664 (1099)
Q Consensus 586 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~L~ls~N 664 (1099)
+|+|++|++++.+|..+. ++|+.|+|++|+++ .+|..+..+++|+.|+|++|+++ .+|.. +..+++|+.|++++|
T Consensus 432 ~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N 507 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDN 507 (562)
T ss_dssp EEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSC
T ss_pred EEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCC
Confidence 999999988877666554 68889999999888 68887888889999999999988 56655 888888999999999
Q ss_pred cCCCcCC
Q 047739 665 NLSGEIP 671 (1099)
Q Consensus 665 ~l~~~~p 671 (1099)
++++..|
T Consensus 508 ~~~c~c~ 514 (562)
T 3a79_B 508 PWDCTCP 514 (562)
T ss_dssp CBCCCHH
T ss_pred CcCCCcc
Confidence 8887555
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.1e-43 Score=433.24 Aligned_cols=456 Identities=20% Similarity=0.215 Sum_probs=298.0
Q ss_pred EeEEecCCCccccccccccccccccceEEccCCccCcccCcccccCCcccEEEeccccCCCccCcccccCCCCceeeccc
Q 047739 68 VTELRLPRLQLSGRISDHLSNLRMLRKLSLRSNSFNGTIPATLAQCTLLRAVFLQYNSLSGNLPANIGNLSNLEILNVAA 147 (1099)
Q Consensus 68 v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~ 147 (1099)
...++++++++++ ||+.+. +.|+.|+|++|.+++..|..++++++|++|+|++|++++..|..++++++|++|+|++
T Consensus 33 ~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 33 ESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 4788999999986 777665 8999999999999988888999999999999999999998899999999999999999
Q ss_pred ccCCCcccCCcccccceeeCCCCccCC-CCCCCCccccccccccccccccccccccccccccCccccccCc--eeEEEcc
Q 047739 148 NRLSGEIANDLPRNLKYFDLSSNGFSG-PIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSS--LVHLSAQ 224 (1099)
Q Consensus 148 N~l~~~i~~~~~~~L~~L~ls~N~l~~-~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l~~l~~--L~~L~l~ 224 (1099)
|.++ .+|..-.++|++|+|++|++++ .+|..|+++++|++|++++|+++.. .++.+++ |++|+++
T Consensus 110 N~l~-~lp~~~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~-----------~~~~l~~L~L~~L~L~ 177 (562)
T 3a79_B 110 NRLQ-NISCCPMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL-----------DLLPVAHLHLSCILLD 177 (562)
T ss_dssp SCCC-EECSCCCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT-----------TTGGGTTSCEEEEEEE
T ss_pred CcCC-ccCccccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC-----------chhhhhhceeeEEEee
Confidence 9998 5666645788899999998886 4567888888888888888888731 2233344 4888888
Q ss_pred CCcC--CccChhhhcCCC-CccEEEcccccCCCccCcccccccCCCCCcceEEEeccccccccCCCCCCCCCCceeEEEc
Q 047739 225 GNAL--GGVIPPAIGALP-KLQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDL 301 (1099)
Q Consensus 225 ~N~l--~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L 301 (1099)
+|.+ ++..|..|..+. +.-.++++.|.+.+.++...+.. ++.|+.|++
T Consensus 178 ~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~-----------------------------l~~L~~L~l 228 (562)
T 3a79_B 178 LVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNA-----------------------------LGHLQLSNI 228 (562)
T ss_dssp ESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESS-----------------------------EEEEEEEEE
T ss_pred cccccccccCcccccccCcceEEEEecCccchhhhhhhcccc-----------------------------cceEEEecc
Confidence 8888 777777777665 22245777777766555433322 345667777
Q ss_pred CCCc-----cccCcchhccCCCCccEEeCCCCccccCc----hhhhCCCCCCCEEEccCCccCccCCccc-----cCCCC
Q 047739 302 QQNQ-----IRGAFPLWLTRASTLTRLDVSGNSISGKI----PAQIGGLWRLEELKMANNSFGGAVPVEI-----KQCSS 367 (1099)
Q Consensus 302 ~~n~-----l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~----p~~~~~l~~L~~L~L~~n~l~~~~~~~l-----~~l~~ 367 (1099)
++|+ +.+ ....+..+++|+.|+|+++.+++.. +..+ ...+|++|++++|.+++.+|..+ .++++
T Consensus 229 ~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~ 306 (562)
T 3a79_B 229 KLNDENCQRLMT-FLSELTRGPTLLNVTLQHIETTWKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKS 306 (562)
T ss_dssp ECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCE
T ss_pred cccccccchHHH-HHHHHhccCcceEEEecCCcCcHHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhcccccchh
Confidence 7664 121 1223556666666666666554321 1112 12356666666666665555554 44555
Q ss_pred CCEEEccCCcCCCCCC-ccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEcc
Q 047739 368 LSLLDLEGNRFSGEIP-EFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLS 446 (1099)
Q Consensus 368 L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 446 (1099)
|+.++++.|.+ .+| +.+..+ + ...+|++|++++|.+.... ....+++|++|+++
T Consensus 307 L~~~~~~~~~~--~~p~~~~~~~--------------------~-~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~ 361 (562)
T 3a79_B 307 LMIEHVKNQVF--LFSKEALYSV--------------------F-AEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFT 361 (562)
T ss_dssp EEEEEEEECCC--SSCHHHHHHH--------------------H-HTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECC
T ss_pred eehhhccccee--ecChhhhhhh--------------------h-ccCcceEEEccCCCccccc--CccCCCCceEEECC
Confidence 55555555544 223 111111 0 0133555555555443211 11344555555555
Q ss_pred CCcCccccCcccCCCCcccEEEccCCcCCCc--CCCCCCCCCCCCEEEeccCcCcccCC-cccCCCCccceeeecccccc
Q 047739 447 ENKFSGEVPASIGNLSQLMVFNLSGNAFSGR--IPASLGNLLKLTTLDLSKQNFSGELP-IELAGLPNLQVIALQENKLS 523 (1099)
Q Consensus 447 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~--~~~~l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~N~l~ 523 (1099)
+|.+++..|..++++++|+.|+|++|++++. +|..+.++++|++|++++|++++.+| ..+..+++|+.|++++|+++
T Consensus 362 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~ 441 (562)
T 3a79_B 362 QNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLT 441 (562)
T ss_dssp SSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCC
T ss_pred CCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCC
Confidence 5555555555555555555555555555532 23445556666666666666665333 23556666666666666666
Q ss_pred CCCchhhhcccccceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCC-CCCCCCCceEEecCCcccCcC
Q 047739 524 GNVPEGFSSLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPE-LGNCSDLEVLELRSNSLTGHI 598 (1099)
Q Consensus 524 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~-l~~l~~L~~L~L~~N~l~~~~ 598 (1099)
+..|..+. ++|++|++++|+++ .+|..+..+++|+.|++++|+++ .+|.. +..+++|+.|+|++|.+.+..
T Consensus 442 ~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c 513 (562)
T 3a79_B 442 GSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTC 513 (562)
T ss_dssp GGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCH
T ss_pred cchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCc
Confidence 55544433 57778888888777 56665667788888888888888 45554 888899999999999988543
No 40
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.4e-43 Score=401.64 Aligned_cols=274 Identities=19% Similarity=0.301 Sum_probs=210.5
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCc---cHHHHHHHHHHhhhccCCcceEEeeEEecC-----CC
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL---DENLFRKEAEFLGKVRHRNLTVLRGYYAGA-----PD 872 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~ 872 (1099)
.++|++.+.||+|+||+||+|.+. +|+.||||++..... ..+.+.+|+++|++++|||||++++++... ..
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 357999999999999999999985 689999999965432 235688999999999999999999987632 34
Q ss_pred ceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccc
Q 047739 873 LRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR 952 (1099)
Q Consensus 873 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~ 952 (1099)
..|+|||||+ |+|.+++... ..+++.....++.||+.||+|||+.|||||||||+|||++.++.+||+|||+|+
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~-----~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~ 206 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSS-----QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMAR 206 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSS-----SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred EEEEEEeCCC-CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceee
Confidence 5699999996 6899999742 458999999999999999999999999999999999999999999999999998
Q ss_pred ccCCCC-CCCccccccccCccccCccccccCC-CCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccc
Q 047739 953 LTIPTP-AEASTSTTAVGTLGYVSPEAALTGE-TTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITE 1030 (1099)
Q Consensus 953 ~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1099)
...... .........+||+.|||||++.+.. ++.++||||+||++|||++|+.||.+.+..+....+...........
T Consensus 207 ~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~ 286 (398)
T 4b99_A 207 GLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAV 286 (398)
T ss_dssp CC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGG
T ss_pred ecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHH
Confidence 653222 2233455679999999999988754 68999999999999999999999998877777766665443221110
Q ss_pred ccc-------CcccCC-CCCChhHHHH-----HHHHHHHHhcCCCCCCCCCCHHHHHH--Hhhccc
Q 047739 1031 LLE-------PGLLEL-DPESSEWEEF-----LLGVKVALLCTAPDPIDRPTMSDIVF--MLEGCR 1081 (1099)
Q Consensus 1031 ~~d-------~~~~~~-~~~~~~~~~~-----~~~~~li~~Cl~~dP~~RPs~~evl~--~L~~~~ 1081 (1099)
... .....+ ......++.+ ..+.+++.+||+.||++|||+.|+++ ++.+..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~ 352 (398)
T 4b99_A 287 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYH 352 (398)
T ss_dssp TC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTC
T ss_pred hhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCC
Confidence 000 000000 0011112211 23568999999999999999999987 344443
No 41
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=7.9e-43 Score=411.29 Aligned_cols=419 Identities=22% Similarity=0.318 Sum_probs=241.5
Q ss_pred cccccccccccceEEccCCccCcccCcccccCCcccEEEeccccCCCccCcccccCCCC-------------ceeecccc
Q 047739 82 ISDHLSNLRMLRKLSLRSNSFNGTIPATLAQCTLLRAVFLQYNSLSGNLPANIGNLSNL-------------EILNVAAN 148 (1099)
Q Consensus 82 ~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L-------------~~L~ls~N 148 (1099)
|.|.-.+.++|+.|++++|.+ |.+|++++++++|++|+|++|+++|.+|..++++.+| ++|++++|
T Consensus 3 ~~p~~~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~ 81 (454)
T 1jl5_A 3 INPRNVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNL 81 (454)
T ss_dssp --------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTS
T ss_pred ccccccccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCC
Confidence 445556678899999999988 7899889999999999999999998999988888875 88999999
Q ss_pred cCCCcccCCcccccceeeCCCCccCCCCCCCCccccccccccccccccccccccccccccCccccccCceeEEEccCCcC
Q 047739 149 RLSGEIANDLPRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNAL 228 (1099)
Q Consensus 149 ~l~~~i~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l~~l~~L~~L~l~~N~l 228 (1099)
.+++ +|. ++++|++|++++|++++ +|.. +++|++|++++|++++ +|.. .++|++|++++|++
T Consensus 82 ~l~~-lp~-~~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~---------l~~~---~~~L~~L~L~~n~l 143 (454)
T 1jl5_A 82 GLSS-LPE-LPPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA---------LSDL---PPLLEYLGVSNNQL 143 (454)
T ss_dssp CCSC-CCS-CCTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC---------CCSC---CTTCCEEECCSSCC
T ss_pred cccc-CCC-CcCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc---------ccCC---CCCCCEEECcCCCC
Confidence 9886 343 56789999999999987 6754 3789999999998873 2221 15889999999999
Q ss_pred CccChhhhcCCCCccEEEcccccCCCccCcccccccCCCCCcceEEEeccccccccCCCCCCCCCCceeEEEcCCCcccc
Q 047739 229 GGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRG 308 (1099)
Q Consensus 229 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~~ 308 (1099)
++ +| +|+.+++|++|++++|++++ +|.. ..+|++|++++|++++
T Consensus 144 ~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~---------------------------------~~~L~~L~L~~n~l~~ 187 (454)
T 1jl5_A 144 EK-LP-ELQNSSFLKIIDVDNNSLKK-LPDL---------------------------------PPSLEFIAAGNNQLEE 187 (454)
T ss_dssp SS-CC-CCTTCTTCCEEECCSSCCSC-CCCC---------------------------------CTTCCEEECCSSCCSS
T ss_pred CC-Cc-ccCCCCCCCEEECCCCcCcc-cCCC---------------------------------cccccEEECcCCcCCc
Confidence 86 56 58899999999999998874 4431 1357777777777776
Q ss_pred CcchhccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccC
Q 047739 309 AFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGD 388 (1099)
Q Consensus 309 ~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 388 (1099)
+| .+..+++|++|++++|++++ +|... .+|++|++++|.++ .+| .+..+++|++|++++|++++ +|..
T Consensus 188 -l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~--- 255 (454)
T 1jl5_A 188 -LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL--- 255 (454)
T ss_dssp -CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---
T ss_pred -Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---
Confidence 44 47777777777777777774 34322 46777777777777 455 37777778888888777774 4442
Q ss_pred CCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCC-CcccEE
Q 047739 389 IRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNL-SQLMVF 467 (1099)
Q Consensus 389 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l-~~L~~L 467 (1099)
+++|++|++++|++++ +|.. +++|++|++++|++++ +|.. .++|++|++++|++++. + .+ ++|+.|
T Consensus 256 ~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~-l~~~---~~~L~~L~l~~N~l~~i-~----~~~~~L~~L 322 (454)
T 1jl5_A 256 PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG-LSEL---PPNLYYLNASSNEIRSL-C----DLPPSLEEL 322 (454)
T ss_dssp CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE-ESCC---CTTCCEEECCSSCCSEE-C----CCCTTCCEE
T ss_pred ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc-ccCc---CCcCCEEECcCCcCCcc-c----CCcCcCCEE
Confidence 3677777777777775 3332 3677888888888775 2211 25778888888887742 2 23 478888
Q ss_pred EccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccC--CCchhhhcccccceecccccc
Q 047739 468 NLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSG--NVPEGFSSLMSLRYLNLSFNG 545 (1099)
Q Consensus 468 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~ 545 (1099)
++++|++++ +|.. +++|++|++++|+++ .+|. .+++|+.|++++|++++ .+|..+..+ +.|.
T Consensus 323 ~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L--------~~n~ 386 (454)
T 1jl5_A 323 NVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDL--------RMNS 386 (454)
T ss_dssp ECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE--------ECCC
T ss_pred ECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHhh--------hhcc
Confidence 888888875 4543 467888888888887 4554 46778888888888876 556554432 3455
Q ss_pred cCCCCCCcccccceeeEEEccCCcCCC--CCCCCCCCCCCCceEEecCCcccCcCCcchhcc
Q 047739 546 FVGQIPATFSFLRSVVVLSFSGNHISG--SIPPELGNCSDLEVLELRSNSLTGHIPTDISHL 605 (1099)
Q Consensus 546 l~~~~~~~l~~l~~L~~L~ls~N~l~~--~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 605 (1099)
+.+.+|.. +++|+.|++++|++++ .+|. +++.|.+.+|.+.+.++.+...+
T Consensus 387 ~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~------sl~~L~~~~~~~~~~~~~~~~~~ 439 (454)
T 1jl5_A 387 HLAEVPEL---PQNLKQLHVETNPLREFPDIPE------SVEDLRMNSERVVDPYEFAHETT 439 (454)
T ss_dssp --------------------------------------------------------------
T ss_pred cccccccc---cCcCCEEECCCCcCCccccchh------hHhheeCcCcccCCccccCHHHh
Confidence 66666653 4678888888888886 5554 45566788888877666555443
No 42
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=3.5e-43 Score=394.60 Aligned_cols=220 Identities=30% Similarity=0.502 Sum_probs=161.1
Q ss_pred CChhhHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCc--ccceEecC----CcEeEEecCCCcccc--ccccccccccccc
Q 047739 22 DRSPEIEALTSFKLNLHDPLGALNGWDSSTPAAPCD--WRGVACTN----NRVTELRLPRLQLSG--RISDHLSNLRMLR 93 (1099)
Q Consensus 22 ~~~~~~~~l~~~k~~~~~~~~~l~~w~~~~~~~~c~--w~gv~c~~----~~v~~l~l~~~~l~g--~~~~~l~~l~~L~ 93 (1099)
|.++|++||++||+++.||. .+++|+.++ +||. |.||+|+. ++|+.|+|+++++.| .+|+.++++++|+
T Consensus 3 c~~~~~~aL~~~k~~~~~~~-~l~~W~~~~--~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~ 79 (313)
T 1ogq_A 3 CNPQDKQALLQIKKDLGNPT-TLSSWLPTT--DCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp SCHHHHHHHHHHHHHTTCCG-GGTTCCTTS--CTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCHHHHHHHHHHHHhcCCcc-cccCCCCCC--CCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCC
Confidence 56699999999999999887 789998644 4788 99999985 799999999999999 9999999999999
Q ss_pred eEEccC-CccCcccCcccccCCcccEEEeccccCCCccCcccccCCCCceeecccccCCCcccCCcc--cccceeeCCCC
Q 047739 94 KLSLRS-NSFNGTIPATLAQCTLLRAVFLQYNSLSGNLPANIGNLSNLEILNVAANRLSGEIANDLP--RNLKYFDLSSN 170 (1099)
Q Consensus 94 ~L~L~~-n~~~~~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~N~l~~~i~~~~~--~~L~~L~ls~N 170 (1099)
+|+|++ |.+.|.+|..++++++|++|+|++|+++|.+|..++++++|++|+|++|.+++.+|..+. ++|++|+|++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 999999999999999999999999999999999999999999888888887765555443 45555555555
Q ss_pred ccCCCCCCCCcccc-ccccccccccccccccccccccccCccccccCceeEEEccCCcCCccChhhhcCCCCccEEEccc
Q 047739 171 GFSGPIPTSISNLS-QLQLINFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQ 249 (1099)
Q Consensus 171 ~l~~~~p~~~~~l~-~L~~L~ls~N~l~~~~~~~~~g~lp~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~ 249 (1099)
+++|.+|..+++++ +|++|++++|+++ |.+|..++.++ |++|++++|++++.+|..|..+++|++|+|++
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l~--------~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 230 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRLT--------GKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAK 230 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEEE--------EECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCS
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCeee--------ccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCC
Confidence 55555555555554 5555555555544 23333333343 44444444444444444444444444444444
Q ss_pred ccCC
Q 047739 250 NNLS 253 (1099)
Q Consensus 250 N~l~ 253 (1099)
|+++
T Consensus 231 N~l~ 234 (313)
T 1ogq_A 231 NSLA 234 (313)
T ss_dssp SEEC
T ss_pred Ccee
Confidence 4443
No 43
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.9e-41 Score=397.87 Aligned_cols=410 Identities=23% Similarity=0.316 Sum_probs=209.8
Q ss_pred cccceeeCCCCccCCCCCCCCccccccccccccccccccccccccccccCccccccCce-------------eEEEccCC
Q 047739 160 RNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSL-------------VHLSAQGN 226 (1099)
Q Consensus 160 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l~~l~~L-------------~~L~l~~N 226 (1099)
..|++|++++|++ |.+|++++++++|++|++++|+++ |.+|..++.+++| ++|++++|
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~--------~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~ 81 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWE--------RNAPPGNGEQREMAVSRLRDCLDRQAHELELNNL 81 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHH--------HTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCccc--------ccCCcccccchhcchhhhhhhhccCCCEEEecCC
Confidence 3455566666666 566666777777777777777666 5566666666655 66666666
Q ss_pred cCCccChhhhcCCCCccEEEcccccCCCccCcccccccCCCCCcceEEEeccccccccCCCCCCCCCCceeEEEcCCCcc
Q 047739 227 ALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQI 306 (1099)
Q Consensus 227 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l 306 (1099)
.+++. |.. .++|++|++++|++++ +|. ..++|++|++++|++
T Consensus 82 ~l~~l-p~~---~~~L~~L~l~~n~l~~-lp~---------------------------------~~~~L~~L~l~~n~l 123 (454)
T 1jl5_A 82 GLSSL-PEL---PPHLESLVASCNSLTE-LPE---------------------------------LPQSLKSLLVDNNNL 123 (454)
T ss_dssp CCSCC-CSC---CTTCSEEECCSSCCSS-CCC---------------------------------CCTTCCEEECCSSCC
T ss_pred ccccC-CCC---cCCCCEEEccCCcCCc-ccc---------------------------------ccCCCcEEECCCCcc
Confidence 66643 221 2566666666666654 332 124466666666666
Q ss_pred ccCcchhccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccc
Q 047739 307 RGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFL 386 (1099)
Q Consensus 307 ~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 386 (1099)
++. |.. .++|++|++++|++++ +| .|+++++|++|++++|++++ +|..+ .+|++|++++|++++ +| .+
T Consensus 124 ~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~ 191 (454)
T 1jl5_A 124 KAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-EL 191 (454)
T ss_dssp SCC-CSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CC
T ss_pred Ccc-cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cc
Confidence 542 211 1466666666666664 45 46666666666666666664 33322 366667777776664 44 46
Q ss_pred cCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccE
Q 047739 387 GDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMV 466 (1099)
Q Consensus 387 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~ 466 (1099)
+++++|++|++++|++++ +|... ++|++|++++|+++ .+| .+..+++|++|++++|++++ +|.. +++|+.
T Consensus 192 ~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~ 261 (454)
T 1jl5_A 192 QNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEA 261 (454)
T ss_dssp TTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCE
T ss_pred cCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCE
Confidence 666667777777766664 23222 46777777777776 455 36677777777777777764 3332 356777
Q ss_pred EEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhcc-cccceecccccc
Q 047739 467 FNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSL-MSLRYLNLSFNG 545 (1099)
Q Consensus 467 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~ 545 (1099)
|++++|++++ +|.. .++|++|++++|++++. |. ..++|+.|++++|++++ ++ .+ ++|++|++++|+
T Consensus 262 L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~---~~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~ 328 (454)
T 1jl5_A 262 LNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SE---LPPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNK 328 (454)
T ss_dssp EECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SC---CCTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSC
T ss_pred EECCCCcccc-cCcc---cCcCCEEECcCCccCcc-cC---cCCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCc
Confidence 7777777774 4433 25677777777777752 11 12567777777777764 22 22 478888888888
Q ss_pred cCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccC--cCCcchhccCcccEEeccCccccccCC
Q 047739 546 FVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTG--HIPTDISHLSHLNVLDLSINNLTGEIP 623 (1099)
Q Consensus 546 l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p 623 (1099)
+++ +|.. +++|+.|++++|+++ .+|. .+++|++|++++|++++ .+|.++..+ +.|.+.|.+|
T Consensus 329 l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L--------~~n~~~~~i~ 392 (454)
T 1jl5_A 329 LIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDL--------RMNSHLAEVP 392 (454)
T ss_dssp CSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE--------ECCC------
T ss_pred ccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHhh--------hhcccccccc
Confidence 875 4443 467888888888888 4665 36788888888888887 566655432 3466777777
Q ss_pred cccCCCCCCCEEECcCccccc--cCChhhhccCCCCeeecCCCcCCCcCCCCccc
Q 047739 624 DEISKCSSLRSLLVNSNHLSG--GIPDSLAKLSNLAVLDLSANNLSGEIPANLSS 676 (1099)
Q Consensus 624 ~~l~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~ 676 (1099)
.. +++|+.|++++|++++ .+|.+ ++.|.+.+|.+.+.+|.....
T Consensus 393 ~~---~~~L~~L~ls~N~l~~~~~iP~s------l~~L~~~~~~~~~~~~~~~~~ 438 (454)
T 1jl5_A 393 EL---PQNLKQLHVETNPLREFPDIPES------VEDLRMNSERVVDPYEFAHET 438 (454)
T ss_dssp -------------------------------------------------------
T ss_pred cc---cCcCCEEECCCCcCCccccchhh------HhheeCcCcccCCccccCHHH
Confidence 63 4789999999999986 66654 556678889988887766544
No 44
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=6e-42 Score=388.98 Aligned_cols=202 Identities=23% Similarity=0.353 Sum_probs=170.0
Q ss_pred HHhccccccccccccceeEEEEEEC----CceEEEEEECCCCCccHHHHHHHHHHhhhc-cCCcceEEeeEEecCCCceE
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYN----DGMVLSIRRLPDGSLDENLFRKEAEFLGKV-RHRNLTVLRGYYAGAPDLRL 875 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~ 875 (1099)
..++|++.++||+|+||+||+|+.+ .++.||+|++.... ....+.+|+++++++ +|||||++++++.+ .+..|
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~-~~~~~ 96 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRK-NDHVV 96 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE-TTEEE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEE-CCEEE
Confidence 4578999999999999999999863 47899999986543 456688999999998 69999999999985 45679
Q ss_pred EEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCC-CcEEEecccccccc
Q 047739 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDAD-FEAHLSDFGLDRLT 954 (1099)
Q Consensus 876 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~-~~~kl~DfGla~~~ 954 (1099)
+||||+++|+|.++++. +++.....++.|++.||+|||+.||+||||||+|||++.+ +.+||+|||+|+..
T Consensus 97 lvmE~~~g~~L~~~~~~--------l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~ 168 (361)
T 4f9c_A 97 IAMPYLEHESFLDILNS--------LSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGT 168 (361)
T ss_dssp EEEECCCCCCHHHHHTT--------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEeCCCcccHHHHHcC--------CCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCccc
Confidence 99999999999999852 7899999999999999999999999999999999999876 79999999999754
Q ss_pred CCCCCC-------------------------CccccccccCccccCccccccC-CCCCcCchhhHHHHHHHHHhCCCCCC
Q 047739 955 IPTPAE-------------------------ASTSTTAVGTLGYVSPEAALTG-ETTKESDVYSFGIVLLELLTGKRPVM 1008 (1099)
Q Consensus 955 ~~~~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~G~il~elltg~~P~~ 1008 (1099)
.+.... .......+||+.|+|||++.+. .|+.++||||+||++|||++|+.||.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~ 248 (361)
T 4f9c_A 169 HDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248 (361)
T ss_dssp TTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred CCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCC
Confidence 322110 1123456899999999999875 48999999999999999999999996
Q ss_pred CCCc
Q 047739 1009 FTQD 1012 (1099)
Q Consensus 1009 ~~~~ 1012 (1099)
...+
T Consensus 249 ~~~~ 252 (361)
T 4f9c_A 249 KASD 252 (361)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 5443
No 45
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=4.6e-41 Score=399.48 Aligned_cols=373 Identities=22% Similarity=0.218 Sum_probs=229.7
Q ss_pred EEEeccccccccCCCCCCCCCCceeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCc-hhhhCCCCCCCEEEccC
Q 047739 273 VVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKI-PAQIGGLWRLEELKMAN 351 (1099)
Q Consensus 273 ~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~-p~~~~~l~~L~~L~L~~ 351 (1099)
.++..++.++.++. ..++|++|+|++|++++..|..|.++++|++|+|++|.+.+.+ +..|.++++|++|+|++
T Consensus 14 ~~~c~~~~l~~lp~-----l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 14 NAICINRGLHQVPE-----LPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp EEECCSSCCSSCCC-----CCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred ccCcCCCCcccCCC-----CCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 34444555555443 1244555555555555544555555555555555555554322 33445555555555555
Q ss_pred CccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccc
Q 047739 352 NSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLP 431 (1099)
Q Consensus 352 n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 431 (1099)
|++++..|..|.++++|++|+|++|++++..+.. ..|.++++|++|+|++|++++..|
T Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~----------------------~~~~~l~~L~~L~L~~n~l~~~~~ 146 (455)
T 3v47_A 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSG----------------------NFFKPLTSLEMLVLRDNNIKKIQP 146 (455)
T ss_dssp CTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHS----------------------STTTTCTTCCEEECCSSBCCSCCC
T ss_pred CccCccChhhccCcccCCEEeCCCCCCCccccCc----------------------ccccCcccCCEEECCCCccCccCc
Confidence 5555444445555555555555555554333222 114444555555555555544434
Q ss_pred hh-hhCCCCCCEEEccCCcCccccCcccCCC--CcccEEEccCCcCCCcCCCC--------CCCCCCCCEEEeccCcCcc
Q 047739 432 EE-VLGMNNLSTLDLSENKFSGEVPASIGNL--SQLMVFNLSGNAFSGRIPAS--------LGNLLKLTTLDLSKQNFSG 500 (1099)
Q Consensus 432 ~~-~~~l~~L~~L~Ls~N~l~~~~~~~l~~l--~~L~~L~L~~N~l~~~~~~~--------l~~l~~L~~L~L~~n~l~~ 500 (1099)
.. +.++++|++|++++|.+++..+..+..+ .+|+.|++++|.+.+..+.. +..+++|++|++++|++++
T Consensus 147 ~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~ 226 (455)
T 3v47_A 147 ASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKE 226 (455)
T ss_dssp CGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCH
T ss_pred ccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccc
Confidence 33 4445555555555555544444444433 34555555555554333222 1234455555555555555
Q ss_pred cCCcccCCC---CccceeeeccccccC----------CCchhhhcc--cccceecccccccCCCCCCcccccceeeEEEc
Q 047739 501 ELPIELAGL---PNLQVIALQENKLSG----------NVPEGFSSL--MSLRYLNLSFNGFVGQIPATFSFLRSVVVLSF 565 (1099)
Q Consensus 501 ~~~~~l~~l---~~L~~L~L~~N~l~~----------~~p~~~~~l--~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l 565 (1099)
..|..+... ++|+.|++++|.+.+ ..+..+..+ ++|++|++++|.+++..|..++.+++|+.|++
T Consensus 227 ~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 306 (455)
T 3v47_A 227 SMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTL 306 (455)
T ss_dssp HHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred cchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEEC
Confidence 444444332 455555555553332 222233332 57888999999888888888888888999999
Q ss_pred cCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccCcccEEeccCccccccCCcccCCCCCCCEEECcCcccccc
Q 047739 566 SGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLSGG 645 (1099)
Q Consensus 566 s~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 645 (1099)
++|++++..|..|+++++|++|+|++|++++..|..+..+++|+.|+|++|++++..|..+..+++|++|+|++|++++.
T Consensus 307 s~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 386 (455)
T 3v47_A 307 AQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSV 386 (455)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccC
Confidence 99988887788888888999999999998877778888888999999999999877788888889999999999998876
Q ss_pred CChhhhccCCCCeeecCCCcCCCcCCC
Q 047739 646 IPDSLAKLSNLAVLDLSANNLSGEIPA 672 (1099)
Q Consensus 646 ~p~~l~~l~~L~~L~ls~N~l~~~~p~ 672 (1099)
.+..+..+++|+.|++++|++++..|.
T Consensus 387 ~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 387 PDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CHhHhccCCcccEEEccCCCcccCCCc
Confidence 666778888999999999999887774
No 46
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=8.2e-41 Score=397.33 Aligned_cols=383 Identities=19% Similarity=0.189 Sum_probs=257.8
Q ss_pred cccccccccccccccccccccCccccccCceeEEEccCCcCCccChhhhcCCCCccEEEcccccCCCccCcccccccCCC
Q 047739 188 LINFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSGY 267 (1099)
Q Consensus 188 ~L~ls~N~l~~~~~~~~~g~lp~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~ 267 (1099)
.++.+++.++ .+|. + .++|++|+|++|.+++..|..|+.+++|++|+|++|.+.+.++...|.+
T Consensus 14 ~~~c~~~~l~---------~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~---- 77 (455)
T 3v47_A 14 NAICINRGLH---------QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRG---- 77 (455)
T ss_dssp EEECCSSCCS---------SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTT----
T ss_pred ccCcCCCCcc---------cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccc----
Confidence 4556666665 4444 2 2577778888888877777788888888888888888776655443332
Q ss_pred CCcceEEEeccccccccCCCCCCCCCCceeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhh--hCCCCCCC
Q 047739 268 PPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQ--IGGLWRLE 345 (1099)
Q Consensus 268 ~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~--~~~l~~L~ 345 (1099)
+++|++|+|++|++++..|..|..+++|++|+|++|.+++..+.. |+++++|+
T Consensus 78 -------------------------l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~ 132 (455)
T 3v47_A 78 -------------------------LSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLE 132 (455)
T ss_dssp -------------------------CTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCC
T ss_pred -------------------------cccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCC
Confidence 456777777777777777777888888888888888887655554 77888888
Q ss_pred EEEccCCccCccCCcc-ccCCCCCCEEEccCCcCCCCCCccccCC--CCCCeeeccCccccccCCcc--------CCCCC
Q 047739 346 ELKMANNSFGGAVPVE-IKQCSSLSLLDLEGNRFSGEIPEFLGDI--RGLKSLTLAANLFSGSIPAS--------FRNLP 414 (1099)
Q Consensus 346 ~L~L~~n~l~~~~~~~-l~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~L~~n~l~~~~~~~--------~~~l~ 414 (1099)
+|+|++|.+++..|.. +.++++|++|+|++|++++..|..+..+ .+|+.|++++|.+.+..+.. +..++
T Consensus 133 ~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~ 212 (455)
T 3v47_A 133 MLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNT 212 (455)
T ss_dssp EEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTC
T ss_pred EEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccc
Confidence 8888888887776665 7778888888888888877777766655 56777777777776554433 23456
Q ss_pred CCCEEEcccCcCccccchhhhCC---CCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEE
Q 047739 415 GLENLNLRHNSLSGSLPEEVLGM---NNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTL 491 (1099)
Q Consensus 415 ~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L 491 (1099)
+|++|++++|++++..|..+... .+|+.|++++|.+.+.. +..+.+.+..+..+..+
T Consensus 213 ~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~--------------~~~~~~~~~~~~~~~~~------ 272 (455)
T 3v47_A 213 SITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSS--------------FGHTNFKDPDNFTFKGL------ 272 (455)
T ss_dssp EEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCC--------------TTCCSSCCCCTTTTGGG------
T ss_pred eeeeEecCCCcccccchhhhhccccccceeeEeeccccccccc--------------cchhhhccCcccccccc------
Confidence 66677777776666666655443 55666666665544221 01111221111111111
Q ss_pred EeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhcccccceecccccccCCCCCCcccccceeeEEEccCCcCC
Q 047739 492 DLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHIS 571 (1099)
Q Consensus 492 ~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~ 571 (1099)
..++|+.|++++|++++..|..|..+++|++|++++|++++..|..|..+++|+.|++++|+++
T Consensus 273 ----------------~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 336 (455)
T 3v47_A 273 ----------------EASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLG 336 (455)
T ss_dssp ----------------TTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred ----------------cccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccC
Confidence 1245555555555555555555666666666666666666666666666666777777777776
Q ss_pred CCCCCCCCCCCCCceEEecCCcccCcCCcchhccCcccEEeccCccccccCCcccCCCCCCCEEECcCccccccCC
Q 047739 572 GSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIP 647 (1099)
Q Consensus 572 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 647 (1099)
+..|..++++++|++|+|++|++++..|..+..+++|+.|+|++|++++..+..+..+++|+.|+|++|++++..|
T Consensus 337 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 337 SIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp EECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 6666677777888888888888887777788888888888888888886555566788888888888888887766
No 47
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=7.4e-41 Score=403.30 Aligned_cols=252 Identities=23% Similarity=0.335 Sum_probs=207.5
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCC-ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEe
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS-LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYD 879 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e 879 (1099)
.++|++.+.||+|+||.||+|..+ +|+.||+|.+.... .+.+.+.+|+++|++++|||||++++++.+ +...|+|||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-~~~~~iv~E 234 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFED-DNEMVMIYE 234 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEC-SSEEEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEE-CCEEEEEEe
Confidence 368999999999999999999986 58999999986543 345678999999999999999999999985 456799999
Q ss_pred ecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCC--CcEEEeccccccccCCC
Q 047739 880 YMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDAD--FEAHLSDFGLDRLTIPT 957 (1099)
Q Consensus 880 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~--~~~kl~DfGla~~~~~~ 957 (1099)
||++|+|.+++... ...+++.....++.||+.||+|||+.+|+||||||+|||++.+ +.+||+|||+|+...+
T Consensus 235 ~~~gg~L~~~i~~~----~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~- 309 (573)
T 3uto_A 235 FMSGGELFEKVADE----HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP- 309 (573)
T ss_dssp CCCCCBHHHHHTCT----TSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT-
T ss_pred ecCCCcHHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccC-
Confidence 99999999999642 2358999999999999999999999999999999999999854 8999999999987632
Q ss_pred CCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCccc
Q 047739 958 PAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLL 1037 (1099)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1037 (1099)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||......+....+.... ........+.+
T Consensus 310 ---~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~- 383 (573)
T 3uto_A 310 ---KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCD--WNMDDSAFSGI- 383 (573)
T ss_dssp ---TSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTC--CCCCSGGGTTS-
T ss_pred ---CCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCC--CCCCcccccCC-
Confidence 233455689999999999999999999999999999999999999998877766555443321 11111111111
Q ss_pred CCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1038 ELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
+ ..+.+++.+||+.||++|||+.|+++.
T Consensus 384 -----s------~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 384 -----S------EDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp -----C------HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -----C------HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 124578999999999999999999873
No 48
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=5.7e-41 Score=399.25 Aligned_cols=247 Identities=20% Similarity=0.261 Sum_probs=195.0
Q ss_pred hccccccccccccceeEEEEEEC-CceEEEEEECCCCC----ccHHHHHH---HHHHhhhccCCcceEEeeEEecCCCce
Q 047739 803 RQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS----LDENLFRK---EAEFLGKVRHRNLTVLRGYYAGAPDLR 874 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~---E~~~l~~l~H~niv~l~~~~~~~~~~~ 874 (1099)
++|++.++||+|+||.||+|+.+ +|+.||+|++.... .....+.+ ++++++.++|||||++++++.+ ++..
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~-~~~l 267 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-PDKL 267 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC-SSEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEE-CCEE
Confidence 57999999999999999999986 58999999985321 12233334 4666777899999999999985 4567
Q ss_pred EEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccccc
Q 047739 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLT 954 (1099)
Q Consensus 875 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~ 954 (1099)
|+|||||+||+|.+++.+. ..+++.....++.||+.||+|||+.|||||||||+|||++.+|.+||+|||+|+..
T Consensus 268 ylVmEy~~GGdL~~~l~~~-----~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQH-----GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEEECCCCSCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeec
Confidence 9999999999999999864 34899999999999999999999999999999999999999999999999999865
Q ss_pred CCCCCCCccccccccCccccCcccccc-CCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhcccccccc
Q 047739 955 IPTPAEASTSTTAVGTLGYVSPEAALT-GETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLE 1033 (1099)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 1033 (1099)
.. ......+||+.|||||++.. ..|+.++||||+||++|||++|+.||......+..... ......... +.
T Consensus 343 ~~-----~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~-~~i~~~~~~--~p 414 (689)
T 3v5w_A 343 SK-----KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID-RMTLTMAVE--LP 414 (689)
T ss_dssp SS-----CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHH-HHHHHCCCC--CC
T ss_pred CC-----CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-HhhcCCCCC--CC
Confidence 22 22345789999999999975 57999999999999999999999999764433332222 222211110 11
Q ss_pred CcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCC-----HHHHHH
Q 047739 1034 PGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPT-----MSDIVF 1075 (1099)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs-----~~evl~ 1075 (1099)
..+ . ..+.+++.+||+.||++|++ ++||.+
T Consensus 415 ~~~--------S----~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 415 DSF--------S----PELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp TTS--------C----HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred ccC--------C----HHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 111 1 12458999999999999998 677764
No 49
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.3e-40 Score=377.15 Aligned_cols=288 Identities=38% Similarity=0.671 Sum_probs=232.6
Q ss_pred ccCCHHHHHHHHhccccccccccccceeEEEEEECCceEEEEEECCCCCc--cHHHHHHHHHHhhhccCCcceEEeeEEe
Q 047739 791 NKITLAETVEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSL--DENLFRKEAEFLGKVRHRNLTVLRGYYA 868 (1099)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~ 868 (1099)
..+++.++....++|+..+.||+|+||.||+|..++|+.||+|++..... ....+.+|++++++++||||+++++++.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 36788999999999999999999999999999988899999999965432 2346899999999999999999999998
Q ss_pred cCCCceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccC---CceecCCCCCCEEECCCCcEEE
Q 047739 869 GAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTS---NMVHGDIKPQNVLFDADFEAHL 945 (1099)
Q Consensus 869 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~---~iiH~Dlk~~NIll~~~~~~kl 945 (1099)
... ..++||||+++|+|.+++.... .....+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||
T Consensus 98 ~~~-~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 98 TPT-ERLLVYPYMANGSVASCLRERP-ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp CSS-CCEEEEECCTTCBHHHHHHCCS-TTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred cCC-ceEEEEEeccCCCHHHHHHhcc-ccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 544 4599999999999999998632 2345589999999999999999999999 9999999999999999999999
Q ss_pred eccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCC-----CCchhHHHHHH
Q 047739 946 SDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMF-----TQDEDIVKWVK 1020 (1099)
Q Consensus 946 ~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~-----~~~~~~~~~~~ 1020 (1099)
+|||+++.... ..........||+.|+|||++.+..++.++||||+|+++|||++|+.||.. ........++.
T Consensus 176 ~Dfg~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 253 (326)
T 3uim_A 176 GDFGLAKLMDY--KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253 (326)
T ss_dssp CCCSSCEECCS--SSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHT
T ss_pred ccCccccccCc--ccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHH
Confidence 99999986522 222334456699999999999888899999999999999999999999952 22333444444
Q ss_pred HHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCCCC
Q 047739 1021 KQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPDI 1086 (1099)
Q Consensus 1021 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~ 1086 (1099)
............+.... .....+....+.+++.+||+.||++|||+.||++.|++.......
T Consensus 254 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~~~ 315 (326)
T 3uim_A 254 GLLKEKKLEALVDVDLQ----GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERW 315 (326)
T ss_dssp TTTSSCCSTTSSCTTCT----TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSSSC
T ss_pred HHhhchhhhhhcChhhc----cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhhhh
Confidence 44444444444443332 222334455677899999999999999999999999987655543
No 50
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3e-40 Score=373.06 Aligned_cols=280 Identities=32% Similarity=0.562 Sum_probs=225.3
Q ss_pred HHHHHHHhccccccccccccceeEEEEEECCceEEEEEECCCCC-ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCce
Q 047739 796 AETVEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGS-LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR 874 (1099)
Q Consensus 796 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 874 (1099)
.++...+++|+..+.||+|+||.||+|.+++|..||+|++.... ...+.+.+|++++++++||||+++++++... ...
T Consensus 32 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~ 110 (321)
T 2qkw_B 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER-NEM 110 (321)
T ss_dssp SCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT-TCC
T ss_pred HHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC-CeE
Confidence 33445678999999999999999999999889999999986543 3357799999999999999999999999854 456
Q ss_pred EEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccccc
Q 047739 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLT 954 (1099)
Q Consensus 875 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~ 954 (1099)
++||||+++|+|.+++.... .....+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++..
T Consensus 111 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 189 (321)
T 2qkw_B 111 ILIYKYMENGNLKRHLYGSD-LPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKG 189 (321)
T ss_dssp EEEEECCTTCBTGGGSSSSC-CCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEcCCCCcHHHHHhccC-CCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence 99999999999999997532 23345899999999999999999999999999999999999999999999999999764
Q ss_pred CCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCch---hHHHHHHHHhhhcccccc
Q 047739 955 IPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDE---DIVKWVKKQLQKGQITEL 1031 (1099)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~---~~~~~~~~~~~~~~~~~~ 1031 (1099)
... ..........||..|+|||++.+..++.++||||||+++|||++|+.||...... ....+.......+.+...
T Consensus 190 ~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (321)
T 2qkw_B 190 TEL-DQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268 (321)
T ss_dssp SSS-SCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSS
T ss_pred ccc-cccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHh
Confidence 221 1122234456899999999999899999999999999999999999999754332 234444444444555555
Q ss_pred ccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccC
Q 047739 1032 LEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRV 1082 (1099)
Q Consensus 1032 ~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 1082 (1099)
+++.... ....+....+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 269 ~~~~~~~----~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 269 VDPNLAD----KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp SSSSCTT----CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cChhhcc----ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 5544321 1223344456789999999999999999999999987653
No 51
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.6e-40 Score=372.38 Aligned_cols=262 Identities=26% Similarity=0.422 Sum_probs=203.5
Q ss_pred HHHhccccccccccccceeEEEEEECCceEEEEEECCCCCccH---HHHHHHHHHhhhccCCcceEEeeEEecCCCceEE
Q 047739 800 EATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDE---NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLL 876 (1099)
Q Consensus 800 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~---~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 876 (1099)
....+|++.+.||+|+||.||+|.+. |..||+|.+....... +.+.+|++++++++||||+++++++.... ..++
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~l 111 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP-NLSI 111 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT-CCEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC-ceEE
Confidence 34678999999999999999999874 7889999986554332 56889999999999999999999998554 4599
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCC--ceecCCCCCCEEECCCCcEEEecccccccc
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSN--MVHGDIKPQNVLFDADFEAHLSDFGLDRLT 954 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~--iiH~Dlk~~NIll~~~~~~kl~DfGla~~~ 954 (1099)
||||+++|+|.+++.... ....+++..++.++.|+++||+|||+.| |+||||||+||+++.++.+||+|||+++..
T Consensus 112 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 112 VTEYLSRGSLYRLLHKSG--AREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp EEECCTTCBHHHHHHSTT--HHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred EEecCCCCcHHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 999999999999997532 1134899999999999999999999999 999999999999999999999999999754
Q ss_pred CCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccC
Q 047739 955 IPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEP 1034 (1099)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1034 (1099)
.. .........||+.|+|||++.+..++.++||||+|+++|||++|+.||......+....+............+
T Consensus 190 ~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~-- 264 (309)
T 3p86_A 190 AS---TFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNL-- 264 (309)
T ss_dssp ---------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTS--
T ss_pred cc---cccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccC--
Confidence 21 1223345679999999999999999999999999999999999999998776655544433221111111111
Q ss_pred cccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCC
Q 047739 1035 GLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGP 1084 (1099)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 1084 (1099)
+ ..+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 265 ----------~----~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 265 ----------N----PQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp ----------C----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred ----------C----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 1 12458999999999999999999999999876543
No 52
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=6.1e-40 Score=370.62 Aligned_cols=264 Identities=27% Similarity=0.403 Sum_probs=210.9
Q ss_pred HhccccccccccccceeEEEEEEC----CceEEEEEECCCCC--ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN----DGMVLSIRRLPDGS--LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 875 (1099)
..+|.+.+.||+|+||.||+|.+. .+..||+|.+.... ...+.+.+|++++++++||||+++++++.+.. ..+
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 126 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR-LAM 126 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGG-CCE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC-ccE
Confidence 467889999999999999999984 45679999997543 23467999999999999999999999998544 459
Q ss_pred EEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccC
Q 047739 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTI 955 (1099)
Q Consensus 876 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 955 (1099)
+||||+++|+|.++++.. ...+++..+..++.|+++||+|||+.+|+||||||+||+++.++.+||+|||+++...
T Consensus 127 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 202 (325)
T 3kul_A 127 IVTEYMENGSLDTFLRTH----DGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE 202 (325)
T ss_dssp EEEECCTTCBHHHHHHTT----TTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EEeeCCCCCcHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence 999999999999999642 2358999999999999999999999999999999999999999999999999998764
Q ss_pred CCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhccccccccC
Q 047739 956 PTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLEP 1034 (1099)
Q Consensus 956 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1034 (1099)
.............+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+....+....... ..
T Consensus 203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~-----~~- 276 (325)
T 3kul_A 203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLP-----AP- 276 (325)
T ss_dssp ----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCC-----CC-
T ss_pred cCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCC-----CC-
Confidence 33333333444567889999999998899999999999999999999 999998776665554443321100 00
Q ss_pred cccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCCCCC
Q 047739 1035 GLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPDIP 1087 (1099)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 1087 (1099)
.... ..+.+++.+||+.||++|||+.||++.|+++...+...
T Consensus 277 -------~~~~----~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~~ 318 (325)
T 3kul_A 277 -------MGCP----HALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESL 318 (325)
T ss_dssp -------TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC--
T ss_pred -------CCcC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcccc
Confidence 0111 13457899999999999999999999999987665543
No 53
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.3e-39 Score=372.37 Aligned_cols=261 Identities=22% Similarity=0.322 Sum_probs=211.2
Q ss_pred HhccccccccccccceeEEEEEEC--------CceEEEEEECCCCCcc--HHHHHHHHHHhhhc-cCCcceEEeeEEecC
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN--------DGMVLSIRRLPDGSLD--ENLFRKEAEFLGKV-RHRNLTVLRGYYAGA 870 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~--~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 870 (1099)
.++|.+.+.||+|+||.||+|.+. ++..||+|.+...... .+.+.+|+++++++ +||||+++++++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 468999999999999999999862 4678999999764332 35789999999999 899999999999854
Q ss_pred CCceEEEEeecCCCCHHHHHhhhcc-----------CCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECC
Q 047739 871 PDLRLLVYDYMPNGNLGTLLQEASH-----------QDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDA 939 (1099)
Q Consensus 871 ~~~~~lV~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~ 939 (1099)
...|+||||+++|+|.+++..... .....+++..+..++.||++||+|||+.||+||||||+||+++.
T Consensus 160 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~ 238 (370)
T 2psq_A 160 -GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE 238 (370)
T ss_dssp -SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT
T ss_pred -CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECC
Confidence 456999999999999999986432 12345899999999999999999999999999999999999999
Q ss_pred CCcEEEeccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHH
Q 047739 940 DFEAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKW 1018 (1099)
Q Consensus 940 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~ 1018 (1099)
++.+||+|||+++...... .........+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+....
T Consensus 239 ~~~~kl~DFG~a~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~ 317 (370)
T 2psq_A 239 NNVMKIADFGLARDINNID-YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 317 (370)
T ss_dssp TCCEEECCCSSCEETTCCC-TTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH
T ss_pred CCCEEEccccCCcccCccc-ceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 9999999999998653221 1223344567889999999999999999999999999999999 9999987766665544
Q ss_pred HHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhccc
Q 047739 1019 VKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCR 1081 (1099)
Q Consensus 1019 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 1081 (1099)
+..... ... +.... ..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 318 ~~~~~~----~~~---------~~~~~----~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 318 LKEGHR----MDK---------PANCT----NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp HHTTCC----CCC---------CTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhcCCC----CCC---------CCCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 332211 000 01111 12457899999999999999999999998764
No 54
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.1e-39 Score=358.52 Aligned_cols=257 Identities=23% Similarity=0.393 Sum_probs=214.2
Q ss_pred HhccccccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEeec
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYM 881 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e~~ 881 (1099)
.++|+..+.||+|+||.||+|.+.++..||+|++.......+.+.+|++++++++||||+++++++.+. ...++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ-APICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSS-SSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CceEEEEEeC
Confidence 457999999999999999999998899999999988777788999999999999999999999999854 4569999999
Q ss_pred CCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCCCCC
Q 047739 882 PNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTPAEA 961 (1099)
Q Consensus 882 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 961 (1099)
++|+|.+++... ...+++..+..++.|+++||+|||+.+|+||||||+||+++.++.+||+|||+++.... ...
T Consensus 88 ~~~~L~~~l~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~--~~~ 161 (269)
T 4hcu_A 88 EHGCLSDYLRTQ----RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD--DQY 161 (269)
T ss_dssp TTCBHHHHHHTT----TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCC--HHH
T ss_pred CCCcHHHHHHhc----CcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccc--ccc
Confidence 999999999742 23589999999999999999999999999999999999999999999999999986521 112
Q ss_pred ccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhccccccccCcccCCC
Q 047739 962 STSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLELD 1040 (1099)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 1040 (1099)
.......+|..|+|||.+.+..++.++||||+|+++|||++ |+.||......+....+..... ...+
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~------~~~~------ 229 (269)
T 4hcu_A 162 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR------LYKP------ 229 (269)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC------CCCC------
T ss_pred ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCcc------CCCC------
Confidence 23344567888999999998999999999999999999999 9999987766555444332211 0000
Q ss_pred CCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccC
Q 047739 1041 PESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRV 1082 (1099)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 1082 (1099)
...+ ..+.+++.+||+.||++||++.|+++.|+++..
T Consensus 230 -~~~~----~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 230 -RLAS----THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp -TTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CcCC----HHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 1111 124578999999999999999999999997753
No 55
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.6e-39 Score=384.52 Aligned_cols=257 Identities=25% Similarity=0.429 Sum_probs=213.4
Q ss_pred HHhccccccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEee
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDY 880 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e~ 880 (1099)
..++|...+.||+|+||.||+|.++++..||||.+.......+.|.+|++++++++||||+++++++.. ...++||||
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~--~~~~lv~e~ 263 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK--EPIYIITEF 263 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEECS--SSCEEEECC
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEeC--CccEEEEee
Confidence 356899999999999999999999989999999998777778899999999999999999999999873 346999999
Q ss_pred cCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCCCC
Q 047739 881 MPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTPAE 960 (1099)
Q Consensus 881 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 960 (1099)
+++|+|.++++... ...+++..+..++.||++||+|||+.+|+||||||+||+++.++.+||+|||+++.... ..
T Consensus 264 ~~~g~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~--~~ 338 (454)
T 1qcf_A 264 MAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIED--NE 338 (454)
T ss_dssp CTTCBHHHHHHSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCC--HH
T ss_pred cCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCC--Cc
Confidence 99999999997532 12478899999999999999999999999999999999999999999999999986521 11
Q ss_pred CccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhccccccccCcccCC
Q 047739 961 ASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLEL 1039 (1099)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 1039 (1099)
........+|..|+|||++....++.++||||||+++|||++ |+.||......+....+.......
T Consensus 339 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~------------- 405 (454)
T 1qcf_A 339 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMP------------- 405 (454)
T ss_dssp HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCC-------------
T ss_pred eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC-------------
Confidence 112233456789999999998999999999999999999999 999998776665555443321100
Q ss_pred CCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhccc
Q 047739 1040 DPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCR 1081 (1099)
Q Consensus 1040 ~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 1081 (1099)
.+...+ ..+.+++.+||+.||++|||+++|++.|+++.
T Consensus 406 ~~~~~~----~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 406 RPENCP----EELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp CCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred CCCCCC----HHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 011111 12457899999999999999999999999764
No 56
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.9e-39 Score=354.94 Aligned_cols=258 Identities=23% Similarity=0.364 Sum_probs=214.2
Q ss_pred HhccccccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEeec
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYM 881 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e~~ 881 (1099)
.++|+..+.||+|+||.||+|.++++..||+|.+.......+.+.+|++++++++||||+++++++.. ....++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK-EYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEcc-CCceEEEEEcc
Confidence 46799999999999999999999999999999998877778889999999999999999999999975 44569999999
Q ss_pred CCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCCCCC
Q 047739 882 PNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTPAEA 961 (1099)
Q Consensus 882 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 961 (1099)
++|+|.+++.... ..+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++..... ..
T Consensus 86 ~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~--~~ 159 (268)
T 3sxs_A 86 SNGCLLNYLRSHG----KGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD--QY 159 (268)
T ss_dssp TTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTT--CE
T ss_pred CCCcHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchh--hh
Confidence 9999999997642 34899999999999999999999999999999999999999999999999999865221 22
Q ss_pred ccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhccccccccCcccCCC
Q 047739 962 STSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLELD 1040 (1099)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 1040 (1099)
.......+|..|+|||.+.+..++.++||||+|+++|||++ |+.||...........+... .. ...+
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~----~~--~~~~------ 227 (268)
T 3sxs_A 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQG----HR--LYRP------ 227 (268)
T ss_dssp EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT----CC--CCCC------
T ss_pred hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcC----CC--CCCC------
Confidence 23344567788999999998889999999999999999999 99999876655444333221 10 0000
Q ss_pred CCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCC
Q 047739 1041 PESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVG 1083 (1099)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 1083 (1099)
...+ ..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 228 -~~~~----~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 228 -HLAS----DTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp -TTSC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred -CcCh----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 1111 1245789999999999999999999999988654
No 57
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=3.5e-40 Score=372.37 Aligned_cols=266 Identities=23% Similarity=0.285 Sum_probs=207.6
Q ss_pred HhccccccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecCCC---ceEEEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPD---LRLLVY 878 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~---~~~lV~ 878 (1099)
.++|++.++||+|+||.||+|++. ++.||+|++.........+.+|+.++++++||||+++++++..... ..++||
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence 468999999999999999999987 7899999997665556667789999999999999999999985432 358999
Q ss_pred eecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccC----------CceecCCCCCCEEECCCCcEEEecc
Q 047739 879 DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTS----------NMVHGDIKPQNVLFDADFEAHLSDF 948 (1099)
Q Consensus 879 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~----------~iiH~Dlk~~NIll~~~~~~kl~Df 948 (1099)
||+++|+|.++++. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 102 e~~~~g~L~~~l~~------~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 102 AFHEKGSLSDFLKA------NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp ECCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred ecCCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 99999999999975 2389999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCCccccccccCccccCccccccC-----CCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHH-------
Q 047739 949 GLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTG-----ETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIV------- 1016 (1099)
Q Consensus 949 Gla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~------- 1016 (1099)
|+++...... .........||+.|+|||++.+. .++.++|||||||++|||++|+.||....+....
T Consensus 176 g~a~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 254 (322)
T 3soc_A 176 GLALKFEAGK-SAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG 254 (322)
T ss_dssp TTCEEECTTS-CCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHC
T ss_pred Cccccccccc-CccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhc
Confidence 9997653221 22233446899999999998863 4567889999999999999999999764332111
Q ss_pred -----HHHHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccC
Q 047739 1017 -----KWVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRV 1082 (1099)
Q Consensus 1017 -----~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 1082 (1099)
..+................+ ........+.+++.+||+.||++|||+.||++.|+++..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 255 QHPSLEDMQEVVVHKKKRPVLRDYW-------QKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp SSCCHHHHHHHHTTSCCCCCCCGGG-------GSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCchhhhhhhhhcccCCCCccccc-------cccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 11111111111111111100 111223345789999999999999999999999998754
No 58
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2e-38 Score=373.95 Aligned_cols=364 Identities=17% Similarity=0.230 Sum_probs=188.1
Q ss_pred cccccccccccccccceEEccCCccCcccCcccccCCcccEEEeccccCCCccCcccccCCCCceeecccccCCCcccCC
Q 047739 78 LSGRISDHLSNLRMLRKLSLRSNSFNGTIPATLAQCTLLRAVFLQYNSLSGNLPANIGNLSNLEILNVAANRLSGEIAND 157 (1099)
Q Consensus 78 l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~N~l~~~i~~~ 157 (1099)
..+..+..++++++|++|+|++|.+++ +| .++.+++|++|+|++|++++. | ++.+++|++|+|++|.+++. |-.
T Consensus 30 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~~~ 103 (457)
T 3bz5_A 30 MQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-DVT 103 (457)
T ss_dssp CCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-CCT
T ss_pred cCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-ecC
Confidence 344455677888888888888888886 46 688888888888888888873 4 77788888877777777652 211
Q ss_pred cccccceeeCCCCccCCCCCCCCccccccccccccccccccccccccccccCccccccCceeEEEccCCcCCccChhhhc
Q 047739 158 LPRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAIG 237 (1099)
Q Consensus 158 ~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l~~l~~L~~L~l~~N~l~~~~p~~~~ 237 (1099)
-.++|++|++++|++++ +| ++++++|++|++++|++++ +| ++.+++|++|++++|+..+.+ .++
T Consensus 104 ~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~---------l~--l~~l~~L~~L~l~~n~~~~~~--~~~ 167 (457)
T 3bz5_A 104 PLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE---------ID--VSHNTQLTELDCHLNKKITKL--DVT 167 (457)
T ss_dssp TCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC---------CC--CTTCTTCCEEECTTCSCCCCC--CCT
T ss_pred CCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce---------ec--cccCCcCCEEECCCCCccccc--ccc
Confidence 11445555555555543 22 4455555555555555441 11 334444444444444322222 233
Q ss_pred CCCCccEEEcccccCCCccCcccccccCCCCCcceEEEeccccccccCCCCCCCCCCceeEEEcCCCccccCcchhccCC
Q 047739 238 ALPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRA 317 (1099)
Q Consensus 238 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l 317 (1099)
.+++|+ +|++++|++++. | +..+
T Consensus 168 ~l~~L~------------------------------------------------------~L~ls~n~l~~l-~--l~~l 190 (457)
T 3bz5_A 168 PQTQLT------------------------------------------------------TLDCSFNKITEL-D--VSQN 190 (457)
T ss_dssp TCTTCC------------------------------------------------------EEECCSSCCCCC-C--CTTC
T ss_pred cCCcCC------------------------------------------------------EEECCCCcccee-c--cccC
Confidence 444444 444444444432 2 4444
Q ss_pred CCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeec
Q 047739 318 STLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTL 397 (1099)
Q Consensus 318 ~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 397 (1099)
++|++|++++|++++. .++.+++|++|++++|++++ +| +..+++|++|++++|++++.. ++.+++|+.|++
T Consensus 191 ~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l 261 (457)
T 3bz5_A 191 KLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHC 261 (457)
T ss_dssp TTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEEC
T ss_pred CCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEec
Confidence 5555555555555432 24455555555555555554 23 445555555555555555322 233444555544
Q ss_pred cCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCCCc
Q 047739 398 AANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGR 477 (1099)
Q Consensus 398 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 477 (1099)
+.| +|+.|++++|.+.+.+| +..+++|+.|++++|...+.+|.. ..+|+.|++++|
T Consensus 262 ~~n--------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~---~~~L~~L~l~~~----- 317 (457)
T 3bz5_A 262 IQT--------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQ---AAGITELDLSQN----- 317 (457)
T ss_dssp TTC--------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECT---TCCCSCCCCTTC-----
T ss_pred cCC--------------CCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccC---CCcceEechhhc-----
Confidence 443 23444555555444444 234455555555555544444421 122222222222
Q ss_pred CCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhcccccceecccccccCCCCCCccccc
Q 047739 478 IPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATFSFL 557 (1099)
Q Consensus 478 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l 557 (1099)
++|++|++++|++++. .++.+++|+.|++++|++++ ++.|+.|++++|.+.|. +.+
T Consensus 318 --------~~L~~L~L~~N~l~~l---~l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~ 373 (457)
T 3bz5_A 318 --------PKLVYLYLNNTELTEL---DVSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQT 373 (457)
T ss_dssp --------TTCCEEECTTCCCSCC---CCTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEE
T ss_pred --------ccCCEEECCCCccccc---ccccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----cee
Confidence 3455555555555542 24555555555555555543 13444455555555443 233
Q ss_pred ceeeEEEccCCcCCCCCCCC
Q 047739 558 RSVVVLSFSGNHISGSIPPE 577 (1099)
Q Consensus 558 ~~L~~L~ls~N~l~~~~p~~ 577 (1099)
..|..+++++|+++|.+|..
T Consensus 374 ~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 374 ITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp EECCCBCCBTTBEEEECCTT
T ss_pred eecCccccccCcEEEEcChh
Confidence 44444555555555555543
No 59
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.6e-39 Score=374.00 Aligned_cols=261 Identities=26% Similarity=0.426 Sum_probs=198.6
Q ss_pred HhccccccccccccceeEEEEEEC----CceEEEEEECCCCCc--cHHHHHHHHHHhhhccCCcceEEeeEEecCCCceE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN----DGMVLSIRRLPDGSL--DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 875 (1099)
..+|++.+.||+|+||.||+|++. ++..||+|.+..... ..+.|.+|++++++++||||+++++++... ...+
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~ 122 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKS-KPVM 122 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-SSCE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC-CceE
Confidence 457899999999999999999875 578899999975432 346799999999999999999999999854 4569
Q ss_pred EEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccC
Q 047739 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTI 955 (1099)
Q Consensus 876 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 955 (1099)
+||||+++|+|.++++.. ...+++..+..++.||++||+|||+.+|+||||||+||+++.++.+||+|||+++...
T Consensus 123 lv~e~~~~~sL~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 198 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRKH----DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLE 198 (373)
T ss_dssp EEEECCTTCBHHHHHHTT----TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EEEeCCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence 999999999999999752 2458999999999999999999999999999999999999999999999999998653
Q ss_pred CCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhccccccccC
Q 047739 956 PTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLEP 1034 (1099)
Q Consensus 956 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1034 (1099)
.............++..|+|||++.+..++.++||||||+++|||++ |+.||......+....+.......
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~-------- 270 (373)
T 2qol_A 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP-------- 270 (373)
T ss_dssp ---------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECC--------
T ss_pred cCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC--------
Confidence 32222222233456788999999999999999999999999999998 999998766655444433211100
Q ss_pred cccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCC
Q 047739 1035 GLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGP 1084 (1099)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 1084 (1099)
.+...+ ..+.+++.+||+.||++||++.||++.|+++...+
T Consensus 271 -----~~~~~~----~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 271 -----PPMDCP----AALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp -----CCTTCB----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred -----CCcccc----HHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 001111 13467899999999999999999999999876543
No 60
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.6e-39 Score=364.23 Aligned_cols=250 Identities=22% Similarity=0.321 Sum_probs=197.2
Q ss_pred HHhccccccccccccceeEEEEEEC-CceEEEEEECCCCC--ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEE
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS--LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLV 877 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 877 (1099)
..++|++.+.||+|+||.||+|.+. +|+.||+|++.... .+.+.+.+|++++++++||||+++++++.. ....++|
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~-~~~~~lv 86 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLET-ANKIFMV 86 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEe-CCEEEEE
Confidence 3568999999999999999999974 68999999985433 234578999999999999999999999985 4556999
Q ss_pred EeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCC
Q 047739 878 YDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPT 957 (1099)
Q Consensus 878 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 957 (1099)
|||+++|+|.+++... ..+++..+..++.||++||+|||+.||+||||||+||+++.++.+||+|||++.....
T Consensus 87 ~E~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~- 160 (347)
T 3zgw_A 87 LEYCPGGELFDYIISQ-----DRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG- 160 (347)
T ss_dssp EECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC----
T ss_pred EeCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccC-
Confidence 9999999999999753 2489999999999999999999999999999999999999999999999999875422
Q ss_pred CCCCccccccccCccccCccccccCCC-CCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcc
Q 047739 958 PAEASTSTTAVGTLGYVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGL 1036 (1099)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1036 (1099)
.........+||+.|+|||++.+..+ +.++||||+||++|||++|+.||......+....+... ... ....
T Consensus 161 -~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~----~~~--~p~~- 232 (347)
T 3zgw_A 161 -NKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRG----KYD--VPKW- 232 (347)
T ss_dssp ------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT----CCC--CCTT-
T ss_pred -CCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC----CCC--CCCC-
Confidence 12233455689999999999988775 89999999999999999999999876665555444332 110 0000
Q ss_pred cCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1037 LELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
.. ..+.+++.+||+.||++|||++|+++.
T Consensus 233 -------~s----~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 233 -------LS----PSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp -------CC----HHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -------CC----HHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 01 123578999999999999999999973
No 61
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=3.9e-39 Score=380.70 Aligned_cols=267 Identities=28% Similarity=0.447 Sum_probs=212.7
Q ss_pred HhccccccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEeec
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYM 881 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e~~ 881 (1099)
.++|...+.||+|+||.||+|.++++..||+|.+.......+.|.+|++++++++||||+++++++.+ ...++||||+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~iv~e~~ 260 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYM 260 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEECCC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC--CceEEEehhh
Confidence 56789999999999999999999988899999998777777889999999999999999999999875 3469999999
Q ss_pred CCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCCCCC
Q 047739 882 PNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTPAEA 961 (1099)
Q Consensus 882 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 961 (1099)
++|+|.+++.... ...+++..+..++.|+++||+|||+.+|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 261 ~~gsL~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--~~ 335 (452)
T 1fmk_A 261 SKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN--EY 335 (452)
T ss_dssp TTCBHHHHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred cCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCC--ce
Confidence 9999999997532 234889999999999999999999999999999999999999999999999999865221 11
Q ss_pred ccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhccccccccCcccCCC
Q 047739 962 STSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLELD 1040 (1099)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 1040 (1099)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+....+..... .. .
T Consensus 336 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~----~~---------~ 402 (452)
T 1fmk_A 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR----MP---------C 402 (452)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC----CC---------C
T ss_pred ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC----CC---------C
Confidence 22334567889999999999999999999999999999999 9999987666554444332111 00 0
Q ss_pred CCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCCCCCCCCCCCCCCCC
Q 047739 1041 PESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPDIPSSADPTTQPSP 1098 (1099)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~p 1098 (1099)
+...+ ..+.+++.+||+.||++|||++++++.|+++ ..+.+++++|.+
T Consensus 403 ~~~~~----~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~------~~~~~~~~~~~~ 450 (452)
T 1fmk_A 403 PPECP----ESLHDLMCQCWRKEPEERPTFEYLQAFLEDY------FTSTEPQYQPGE 450 (452)
T ss_dssp CTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTT------TSCSCCCCCCSC
T ss_pred CCCCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHH------hccCCccccccc
Confidence 01111 1245789999999999999999999999966 344555555543
No 62
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=7.4e-39 Score=361.33 Aligned_cols=247 Identities=18% Similarity=0.243 Sum_probs=204.3
Q ss_pred HhccccccccccccceeEEEEEE-CCceEEEEEECCCCCc---cHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACY-NDGMVLSIRRLPDGSL---DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLV 877 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 877 (1099)
..+|.+.+.||+|+||.||+|.+ .+|+.||+|++..... ..+.+.+|++++++++||||+++++++.. ....|+|
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~~~lv 92 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET-EKTLYLI 92 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-CCEEEEE
Confidence 45799999999999999999998 4689999999854322 34568899999999999999999999984 4557999
Q ss_pred EeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCC
Q 047739 878 YDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPT 957 (1099)
Q Consensus 878 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 957 (1099)
|||+++|+|.+++... ..+++.....++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++....
T Consensus 93 ~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~- 166 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAH-----GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV- 166 (328)
T ss_dssp ECCCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS-
T ss_pred EECCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCC-
Confidence 9999999999999754 2388999999999999999999999999999999999999999999999999976522
Q ss_pred CCCCccccccccCccccCccccccCCCC-CcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcc
Q 047739 958 PAEASTSTTAVGTLGYVSPEAALTGETT-KESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGL 1036 (1099)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1036 (1099)
.......+||+.|+|||++.+..++ .++||||+||++|||++|+.||......+....+... ... .+.
T Consensus 167 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~----~~~--~p~-- 235 (328)
T 3fe3_A 167 ---GGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG----KYR--IPF-- 235 (328)
T ss_dssp ---SCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC----CCC--CCT--
T ss_pred ---CCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC----CCC--CCC--
Confidence 2234567899999999999888775 7899999999999999999999877665555444332 110 000
Q ss_pred cCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1037 LELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
. .. ..+.+++.+||+.||++|||++|+++.
T Consensus 236 -----~-~s----~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 236 -----Y-MS----TDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp -----T-SC----HHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred -----C-CC----HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 01 124578999999999999999999874
No 63
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.1e-38 Score=355.61 Aligned_cols=250 Identities=20% Similarity=0.307 Sum_probs=203.8
Q ss_pred HhccccccccccccceeEEEEEE-CCceEEEEEECCCC-CccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEe
Q 047739 802 TRQFDEENVLSRTRYGLVFKACY-NDGMVLSIRRLPDG-SLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYD 879 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e 879 (1099)
.++|+..+.||+|+||.||+|.. .+|+.||+|.+... ....+.+.+|+.++++++||||+++++++... +..++|||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~~lv~e 97 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG-DELWVVME 97 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEET-TEEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEEC-CEEEEEEE
Confidence 45799999999999999999986 46899999998532 33457789999999999999999999999854 45699999
Q ss_pred ecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCCC
Q 047739 880 YMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTPA 959 (1099)
Q Consensus 880 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 959 (1099)
|+++|+|.+++... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++....
T Consensus 98 ~~~~~~L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~--- 168 (297)
T 3fxz_A 98 YLAGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP--- 168 (297)
T ss_dssp CCTTCBHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS---
T ss_pred CCCCCCHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCC---
Confidence 99999999999752 388999999999999999999999999999999999999999999999999976532
Q ss_pred CCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcccCC
Q 047739 960 EASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLEL 1039 (1099)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 1039 (1099)
.........||+.|+|||++.+..++.++||||+|+++|||++|+.||...........+..... ......+.+
T Consensus 169 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~---~~~~~~~~~--- 242 (297)
T 3fxz_A 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT---PELQNPEKL--- 242 (297)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCS---CCCSCGGGS---
T ss_pred cccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC---CCCCCcccc---
Confidence 22234456899999999999999999999999999999999999999987655443333322111 000000000
Q ss_pred CCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1040 DPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1040 ~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
-..+.+++.+||+.||++|||++|+++.
T Consensus 243 ---------~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 243 ---------SAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp ---------CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---------CHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0124578999999999999999999873
No 64
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=6.8e-39 Score=355.10 Aligned_cols=256 Identities=20% Similarity=0.353 Sum_probs=210.5
Q ss_pred HhccccccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEeec
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYM 881 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e~~ 881 (1099)
.++|+..+.||+|+||.||+|.++++..||+|.+.......+.+.+|++++++++||||+++++++.+ ....++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK-QRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEec-CCCeEEEEecc
Confidence 56899999999999999999999999999999998877788899999999999999999999999985 44569999999
Q ss_pred CCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCCCCC
Q 047739 882 PNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTPAEA 961 (1099)
Q Consensus 882 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 961 (1099)
++|+|.+++.... ..+++..+..++.|++.||+|||+.+|+||||||+||+++.++.+||+|||+++.... ...
T Consensus 102 ~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~--~~~ 175 (283)
T 3gen_A 102 ANGCLLNYLREMR----HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEY 175 (283)
T ss_dssp TTCBHHHHHHCGG----GCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCC--HHH
T ss_pred CCCcHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccccc--ccc
Confidence 9999999997532 3489999999999999999999999999999999999999999999999999986521 112
Q ss_pred ccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhccccccccCcccCCC
Q 047739 962 STSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLELD 1040 (1099)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 1040 (1099)
.......+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||......+....+...... ..+
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~------~~~------ 243 (283)
T 3gen_A 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL------YRP------ 243 (283)
T ss_dssp HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCC------CCC------
T ss_pred ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCC------CCC------
Confidence 22334567788999999998899999999999999999998 99999876665544443322110 000
Q ss_pred CCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhccc
Q 047739 1041 PESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCR 1081 (1099)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 1081 (1099)
.... ..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 244 -~~~~----~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 244 -HLAS----EKVYTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp -TTCC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -CcCC----HHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 1111 13457899999999999999999999998764
No 65
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=9.9e-39 Score=376.63 Aligned_cols=309 Identities=21% Similarity=0.217 Sum_probs=181.8
Q ss_pred eeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccC
Q 047739 296 LQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEG 375 (1099)
Q Consensus 296 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~ 375 (1099)
|++|+|++|++++. + +..+++|++|+|++|++++. | ++.+++|++|++++|++++. .+..+++|++|++++
T Consensus 87 L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~ 157 (457)
T 3bz5_A 87 LTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHL 157 (457)
T ss_dssp CSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTT
T ss_pred CCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCC
Confidence 44444444444432 1 44445555555555555432 2 45555555555555555542 144555555555555
Q ss_pred CcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccC
Q 047739 376 NRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVP 455 (1099)
Q Consensus 376 N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 455 (1099)
|+..+.+ .++.+++|++|++++|++++. | +..+++|+.|++++|++++. .+..+++|+.|++++|++++ +|
T Consensus 158 n~~~~~~--~~~~l~~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip 228 (457)
T 3bz5_A 158 NKKITKL--DVTPQTQLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID 228 (457)
T ss_dssp CSCCCCC--CCTTCTTCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC
T ss_pred CCccccc--ccccCCcCCEEECCCCcccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC
Confidence 5333333 244555555555555555542 2 55556666666666666543 25556666666666666664 33
Q ss_pred cccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhcccc
Q 047739 456 ASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMS 535 (1099)
Q Consensus 456 ~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 535 (1099)
++.+++|+.|++++|++++.. ++.+++|+.|+++.| +|+.|++++|.+.+.+| ++.+++
T Consensus 229 --~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n--------------~L~~L~l~~n~~~~~~~--~~~l~~ 287 (457)
T 3bz5_A 229 --VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQT--------------DLLEIDLTHNTQLIYFQ--AEGCRK 287 (457)
T ss_dssp --CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTC--------------CCSCCCCTTCTTCCEEE--CTTCTT
T ss_pred --ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCC--------------CCCEEECCCCccCCccc--cccccc
Confidence 556666666666666666432 344556666666554 24456666666665555 455677
Q ss_pred cceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccCcccEEeccC
Q 047739 536 LRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSI 615 (1099)
Q Consensus 536 L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 615 (1099)
|++|++++|.+.+.+|.. .++|+.|++ +++++|++|++++|++++ ++ ++.+++|+.||+++
T Consensus 288 L~~L~Ls~n~~l~~l~~~---~~~L~~L~l-------------~~~~~L~~L~L~~N~l~~-l~--l~~l~~L~~L~l~~ 348 (457)
T 3bz5_A 288 IKELDVTHNTQLYLLDCQ---AAGITELDL-------------SQNPKLVYLYLNNTELTE-LD--VSHNTKLKSLSCVN 348 (457)
T ss_dssp CCCCCCTTCTTCCEEECT---TCCCSCCCC-------------TTCTTCCEEECTTCCCSC-CC--CTTCTTCSEEECCS
T ss_pred CCEEECCCCcccceeccC---CCcceEech-------------hhcccCCEEECCCCcccc-cc--cccCCcCcEEECCC
Confidence 777777777766555532 233333333 334677888888888876 33 77788888888888
Q ss_pred ccccccCCcccCCCCCCCEEECcCccccccCChhhhccCCCCeeecCCCcCCCcCCCCcc
Q 047739 616 NNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLSGEIPANLS 675 (1099)
Q Consensus 616 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~ 675 (1099)
|++++ ++.|+.|++++|.++|. .++..|+.+++++|+++|.+|..+.
T Consensus 349 N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~~ 395 (457)
T 3bz5_A 349 AHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDLL 395 (457)
T ss_dssp SCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTCB
T ss_pred CCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChhHh
Confidence 88875 24566667888888765 3566778888999999888887643
No 66
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=3e-39 Score=371.17 Aligned_cols=272 Identities=21% Similarity=0.297 Sum_probs=214.4
Q ss_pred CCHHHHHHHHhccccccccccccceeEEEEEE------CCceEEEEEECCCCCcc--HHHHHHHHHHhhhc-cCCcceEE
Q 047739 793 ITLAETVEATRQFDEENVLSRTRYGLVFKACY------NDGMVLSIRRLPDGSLD--ENLFRKEAEFLGKV-RHRNLTVL 863 (1099)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~--~~~~~~E~~~l~~l-~H~niv~l 863 (1099)
+...++....++|.+.+.||+|+||.||+|.+ .+++.||+|++...... .+.+.+|+++++++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 34445555678999999999999999999974 24689999999754332 35799999999999 79999999
Q ss_pred eeEEecCCCceEEEEeecCCCCHHHHHhhhccC-----------------------------------------------
Q 047739 864 RGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQ----------------------------------------------- 896 (1099)
Q Consensus 864 ~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~----------------------------------------------- 896 (1099)
++++.......++||||+++|+|.++++.....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 999987666679999999999999999864321
Q ss_pred --------------CCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCCCCCc
Q 047739 897 --------------DGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTPAEAS 962 (1099)
Q Consensus 897 --------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 962 (1099)
....+++..+..++.|+++||+|||+.+|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~-~~~~ 250 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD-PDYV 250 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSC-TTCE
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeeccc-ccch
Confidence 0122899999999999999999999999999999999999999999999999999865322 2223
Q ss_pred cccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhccccccccCcccCCCC
Q 047739 963 TSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLELDP 1041 (1099)
Q Consensus 963 ~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 1041 (1099)
......||..|+|||++.+..++.++||||||+++|||++ |+.||.......................
T Consensus 251 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----------- 319 (359)
T 3vhe_A 251 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD----------- 319 (359)
T ss_dssp EC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCT-----------
T ss_pred hccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCC-----------
Confidence 3445678999999999999999999999999999999998 9999987654433322222111111110
Q ss_pred CChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhccc
Q 047739 1042 ESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCR 1081 (1099)
Q Consensus 1042 ~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 1081 (1099)
... ..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 320 -~~~----~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 320 -YTT----PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp -TCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -CCC----HHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 011 12457899999999999999999999998764
No 67
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=3.2e-38 Score=355.94 Aligned_cols=262 Identities=20% Similarity=0.293 Sum_probs=211.4
Q ss_pred cccCCHHHHHHHHhc----------cccccccccccceeEEEEEEC-CceEEEEEECCCCC-ccHHHHHHHHHHhhhccC
Q 047739 790 NNKITLAETVEATRQ----------FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS-LDENLFRKEAEFLGKVRH 857 (1099)
Q Consensus 790 ~~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H 857 (1099)
...++++++..+++. |+..+.||+|+||.||+|... +|+.||||++.... ...+.+.+|+.++++++|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 22 SGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp ---CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCC
T ss_pred CCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCC
Confidence 346788888887764 777889999999999999987 68999999985433 345778999999999999
Q ss_pred CcceEEeeEEecCCCceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEE
Q 047739 858 RNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLF 937 (1099)
Q Consensus 858 ~niv~l~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll 937 (1099)
|||+++++++... ...++||||+++|+|.+++.. ..+++..+..++.|+++||+|||+.||+||||||+||++
T Consensus 102 ~niv~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~------~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll 174 (321)
T 2c30_A 102 FNVVEMYKSYLVG-EELWVLMEFLQGGALTDIVSQ------VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL 174 (321)
T ss_dssp TTBCCEEEEEEET-TEEEEEECCCCSCBHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred CCcceEEEEEEEC-CEEEEEEecCCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE
Confidence 9999999999854 456999999999999999864 248999999999999999999999999999999999999
Q ss_pred CCCCcEEEeccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHH
Q 047739 938 DADFEAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVK 1017 (1099)
Q Consensus 938 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~ 1017 (1099)
+.++.+||+|||+++.... .........||+.|+|||++.+..++.++||||||+++|||++|+.||......+...
T Consensus 175 ~~~~~~kl~Dfg~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~ 251 (321)
T 2c30_A 175 TLDGRVKLSDFGFCAQISK---DVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK 251 (321)
T ss_dssp CTTCCEEECCCTTCEECCS---SSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH
T ss_pred CCCCcEEEeeeeeeeeccc---CccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 9999999999999976522 1223345689999999999999999999999999999999999999998766554443
Q ss_pred HHHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1018 WVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1018 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
.+... .. +.+.. ..... ..+.+++.+||+.||++|||+.|+++.
T Consensus 252 ~~~~~----~~-----~~~~~---~~~~~---~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 252 RLRDS----PP-----PKLKN---SHKVS---PVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHHHS----SC-----CCCTT---GGGSC---HHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHhcC----CC-----CCcCc---cccCC---HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 33221 10 00000 00000 124578999999999999999999874
No 68
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.7e-38 Score=354.71 Aligned_cols=280 Identities=31% Similarity=0.512 Sum_probs=221.9
Q ss_pred ccCCHHHHHHHHhccccc------cccccccceeEEEEEECCceEEEEEECCCCC-----ccHHHHHHHHHHhhhccCCc
Q 047739 791 NKITLAETVEATRQFDEE------NVLSRTRYGLVFKACYNDGMVLSIRRLPDGS-----LDENLFRKEAEFLGKVRHRN 859 (1099)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~H~n 859 (1099)
..+++.++..++.+|... +.||+|+||.||+|.+ ++..||+|++.... ...+.+.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 467899999999999887 8999999999999987 47889999885421 22467899999999999999
Q ss_pred ceEEeeEEecCCCceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECC
Q 047739 860 LTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDA 939 (1099)
Q Consensus 860 iv~l~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~ 939 (1099)
|+++++++... ...++||||+++|+|.+++.... ....+++..+..++.|+++||+|||+.||+||||||+||+++.
T Consensus 92 i~~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDG-DDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSS-SSCEEEEECCTTCBHHHHHHTGG--GCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT
T ss_pred eEEEEEEEecC-CceEEEEEecCCCcHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcC
Confidence 99999999854 45699999999999999997532 2345899999999999999999999999999999999999999
Q ss_pred CCcEEEeccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHH
Q 047739 940 DFEAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWV 1019 (1099)
Q Consensus 940 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~ 1019 (1099)
++.+||+|||+++..... ..........||+.|+|||.+.+ .++.++||||+|+++|||++|+.||...........+
T Consensus 169 ~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~ 246 (307)
T 2nru_A 169 AFTAKISDFGLARASEKF-AQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 246 (307)
T ss_dssp TCCEEECCCTTCEECCSC-SSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHH
T ss_pred CCcEEEeecccccccccc-cccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHH
Confidence 999999999999765221 11222344679999999998764 5899999999999999999999999765544333333
Q ss_pred HHHhhh--ccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhccc
Q 047739 1020 KKQLQK--GQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCR 1081 (1099)
Q Consensus 1020 ~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 1081 (1099)
...... ..+.+.+++.+.. ........+.+++.+||+.||++|||++||++.|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 247 KEEIEDEEKTIEDYIDKKMND-----ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHHTTSCCHHHHSCSSCSC-----CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHHhhhhhhhhhhhccccccc-----cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 332222 1223333333221 12223344568999999999999999999999999874
No 69
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.5e-39 Score=371.92 Aligned_cols=269 Identities=23% Similarity=0.374 Sum_probs=214.1
Q ss_pred HhccccccccccccceeEEEEEEC------CceEEEEEECCCCC--ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCc
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN------DGMVLSIRRLPDGS--LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 873 (1099)
.++|.+.+.||+|+||.||+|.+. ++..||+|++.... .....+.+|+.++++++||||+++++++... ..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~-~~ 148 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS-LP 148 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-SS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecC-CC
Confidence 467999999999999999999853 46789999996532 2345688999999999999999999999854 44
Q ss_pred eEEEEeecCCCCHHHHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCC---cEEEecc
Q 047739 874 RLLVYDYMPNGNLGTLLQEASHQ--DGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADF---EAHLSDF 948 (1099)
Q Consensus 874 ~~lV~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~---~~kl~Df 948 (1099)
.++||||+++|+|.+++...... ....+++..++.++.||++||+|||+.||+||||||+||+++.++ .+||+||
T Consensus 149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DF 228 (367)
T 3l9p_A 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 228 (367)
T ss_dssp CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCC
Confidence 59999999999999999875432 234589999999999999999999999999999999999999555 5999999
Q ss_pred ccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhcc
Q 047739 949 GLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQ 1027 (1099)
Q Consensus 949 Gla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~ 1027 (1099)
|+++..... ..........||+.|+|||++.+..++.++|||||||++|||++ |..||......+....+.....
T Consensus 229 G~a~~~~~~-~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~--- 304 (367)
T 3l9p_A 229 GMARDIYRA-GYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR--- 304 (367)
T ss_dssp HHHHHHHHH-SSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCC---
T ss_pred ccccccccc-cccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---
Confidence 999753211 11223345678999999999999999999999999999999998 9999987766655544433211
Q ss_pred ccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCCCCCCC
Q 047739 1028 ITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPDIPSS 1089 (1099)
Q Consensus 1028 ~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~ 1089 (1099)
... +.... ..+.+++.+||+.||++||++.||++.|+.+...++....
T Consensus 305 -~~~---------~~~~~----~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~~~~~ 352 (367)
T 3l9p_A 305 -MDP---------PKNCP----GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINT 352 (367)
T ss_dssp -CCC---------CTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHHHTC
T ss_pred -CCC---------CccCC----HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChhhccC
Confidence 000 01111 1245789999999999999999999999998876654433
No 70
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=358.55 Aligned_cols=259 Identities=23% Similarity=0.356 Sum_probs=204.8
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCC-ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEe
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS-LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYD 879 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e 879 (1099)
.++|...++||+|+||.||+|.+. +++.||+|.+.... ...+.+.+|++++++++||||+++++++.++ ...++|||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~~lv~e 87 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKD-KRLNFITE 87 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET-TEEEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecC-CeeEEEEE
Confidence 467899999999999999999986 58899999875433 3457799999999999999999999999854 55699999
Q ss_pred ecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCCC
Q 047739 880 YMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTPA 959 (1099)
Q Consensus 880 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 959 (1099)
|+++|+|.++++.. ...+++..+..++.|+++||+|||+.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 88 ~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 163 (310)
T 3s95_A 88 YIKGGTLRGIIKSM----DSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT 163 (310)
T ss_dssp CCTTCBHHHHHHHC----CTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC----
T ss_pred ecCCCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccc
Confidence 99999999999853 24589999999999999999999999999999999999999999999999999986532211
Q ss_pred CC-----------ccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhH--HHHHHHHhhhc
Q 047739 960 EA-----------STSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDI--VKWVKKQLQKG 1026 (1099)
Q Consensus 960 ~~-----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~--~~~~~~~~~~~ 1026 (1099)
.. .......||+.|+|||++.+..++.++||||||+++|||++|..||........ ......... .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~-~ 242 (310)
T 3s95_A 164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD-R 242 (310)
T ss_dssp ----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH-H
T ss_pred cccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc-c
Confidence 11 111256799999999999999999999999999999999999999864322110 000000000 0
Q ss_pred cccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccC
Q 047739 1027 QITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRV 1082 (1099)
Q Consensus 1027 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 1082 (1099)
.....+.+ .+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 243 ~~~~~~~~----------------~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~ 282 (310)
T 3s95_A 243 YCPPNCPP----------------SFFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282 (310)
T ss_dssp TCCTTCCT----------------THHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCCCCH----------------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 00000111 23578999999999999999999999998764
No 71
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=5.1e-38 Score=351.83 Aligned_cols=262 Identities=23% Similarity=0.360 Sum_probs=201.4
Q ss_pred HhccccccccccccceeEEEEEECCceEEEEEECCCCCc---cHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSL---DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVY 878 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 878 (1099)
.++|.+.++||+|+||.||+|.+.+ .+++|.++.... ..+.+.+|++++++++||||+++++++.. +..++||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~lv~ 110 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK--DNLAIVT 110 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--SSCEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc--CcEEEEE
Confidence 3578899999999999999998764 477777754332 33678999999999999999999998763 3358999
Q ss_pred eecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCC
Q 047739 879 DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTP 958 (1099)
Q Consensus 879 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 958 (1099)
||+++|+|.+++... ...+++..+..++.|+++||+|||+.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 111 e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~- 185 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQ----ETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW- 185 (307)
T ss_dssp ECCSSCBHHHHHHTS----CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC-----
T ss_pred ecCCCCcHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccCCCceecccc-
Confidence 999999999999742 345899999999999999999999999999999999999999999999999999754211
Q ss_pred CCCccccccccCccccCccccc---cCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCc
Q 047739 959 AEASTSTTAVGTLGYVSPEAAL---TGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPG 1035 (1099)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1035 (1099)
..........||+.|+|||++. +..++.++||||||+++|||++|+.||......+........ +.. .+.
T Consensus 186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~---~~~----~~~ 258 (307)
T 3lb7_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGR---GYA----SPD 258 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHH---TCC----CCC
T ss_pred cccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhc---CCC----Ccc
Confidence 1223334567999999999986 566889999999999999999999999866554433322221 111 111
Q ss_pred ccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCC
Q 047739 1036 LLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGP 1084 (1099)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 1084 (1099)
....... .+ ..+.+++.+||+.||++||++.||++.|+.++...
T Consensus 259 ~~~~~~~-~~----~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 259 LSKLYKN-CP----KAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp STTSCSS-SC----HHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred hhhhhcC-Cc----HHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 1111111 11 13457899999999999999999999999886554
No 72
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1e-38 Score=381.03 Aligned_cols=259 Identities=21% Similarity=0.374 Sum_probs=214.8
Q ss_pred HhccccccccccccceeEEEEEECC-ceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEee
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDY 880 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e~ 880 (1099)
..+|+..+.||+|+||.||+|.++. +..||+|.+.......+.|.+|++++++++||||+++++++... ...++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-PPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSS-SSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecC-CcEEEEEEc
Confidence 4678999999999999999999875 88999999987777788899999999999999999999999854 446999999
Q ss_pred cCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCCCC
Q 047739 881 MPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTPAE 960 (1099)
Q Consensus 881 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 960 (1099)
+++|+|.++++.. ....+++..+..++.||++||+|||+.+|+||||||+||+++.++.+||+|||+++.... ..
T Consensus 298 ~~~g~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~--~~ 372 (495)
T 1opk_A 298 MTYGNLLDYLREC---NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG--DT 372 (495)
T ss_dssp CTTCBHHHHHHHS---CTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTT--CC
T ss_pred cCCCCHHHHHHhc---CcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccC--Cc
Confidence 9999999999853 234589999999999999999999999999999999999999999999999999986522 12
Q ss_pred CccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhccccccccCcccCC
Q 047739 961 ASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLEL 1039 (1099)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 1039 (1099)
........++..|+|||++.+..++.++|||||||++|||++ |+.||......+..+.+...... .
T Consensus 373 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~-------------~ 439 (495)
T 1opk_A 373 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM-------------E 439 (495)
T ss_dssp EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC-------------C
T ss_pred eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-------------C
Confidence 222334557789999999998899999999999999999999 99999877666555443321110 0
Q ss_pred CCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCC
Q 047739 1040 DPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVG 1083 (1099)
Q Consensus 1040 ~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 1083 (1099)
.+...+ ..+.+++.+||+.||++|||+.||++.|+.+...
T Consensus 440 ~~~~~~----~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 440 RPEGCP----EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp CCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred CCCCCC----HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 011111 1245789999999999999999999999987543
No 73
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-38 Score=357.16 Aligned_cols=252 Identities=18% Similarity=0.287 Sum_probs=208.4
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEee
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDY 880 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e~ 880 (1099)
.++|++.+.||+|+||.||+|... ++..||+|.+.....+.+.+.+|++++++++||||+++++++.+. ...++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~-~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESM-EELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEET-TEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecC-CEEEEEEEe
Confidence 467999999999999999999986 588999999987666677899999999999999999999999854 556999999
Q ss_pred cCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECC--CCcEEEeccccccccCCCC
Q 047739 881 MPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDA--DFEAHLSDFGLDRLTIPTP 958 (1099)
Q Consensus 881 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~--~~~~kl~DfGla~~~~~~~ 958 (1099)
+++|+|.+++... ...+++..+..++.|+++||+|||+.||+||||||+||+++. ++.+||+|||+++....
T Consensus 83 ~~g~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~-- 156 (321)
T 1tki_A 83 ISGLDIFERINTS----AFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP-- 156 (321)
T ss_dssp CCCCBHHHHHTSS----SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT--
T ss_pred CCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC--
Confidence 9999999999642 235899999999999999999999999999999999999987 78999999999986532
Q ss_pred CCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcccC
Q 047739 959 AEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLE 1038 (1099)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 1038 (1099)
........||+.|+|||++.+..++.++||||+|+++|||++|+.||......+....+...... ......+..
T Consensus 157 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~-- 230 (321)
T 1tki_A 157 --GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYT--FDEEAFKEI-- 230 (321)
T ss_dssp --TCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--CCHHHHTTS--
T ss_pred --CCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCC--CChhhhccC--
Confidence 22344567999999999999888899999999999999999999999877666555544432110 000000000
Q ss_pred CCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1039 LDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
-..+.+++.+||+.||++|||+.|+++.
T Consensus 231 ----------s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 231 ----------SIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp ----------CHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ----------CHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0234689999999999999999999983
No 74
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=6.5e-38 Score=354.54 Aligned_cols=247 Identities=22% Similarity=0.327 Sum_probs=204.2
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCC----CccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDG----SLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLL 876 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 876 (1099)
.++|+..+.||+|+||.||+|+.+ +|+.||+|.+... ....+.+.+|++++++++||||+++++++... ...|+
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~-~~~~l 82 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH-DRLCF 82 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECS-SEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeC-CEEEE
Confidence 357999999999999999999986 5899999998542 22346788999999999999999999999854 55699
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCC
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIP 956 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 956 (1099)
||||+++|+|.+++.+. ..+++.....++.||+.||+|||+.||+||||||+||+++.++.+||+|||+++....
T Consensus 83 v~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 157 (337)
T 1o6l_A 83 VMEYANGGELFFHLSRE-----RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157 (337)
T ss_dssp EEECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence 99999999999999753 3488999999999999999999999999999999999999999999999999985421
Q ss_pred CCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcc
Q 047739 957 TPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGL 1036 (1099)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1036 (1099)
........+||+.|+|||++.+..++.++||||+||++|||++|+.||...........+... ... +..
T Consensus 158 ---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~----~~~--~p~-- 226 (337)
T 1o6l_A 158 ---DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME----EIR--FPR-- 226 (337)
T ss_dssp ---TTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC----CCC--CCT--
T ss_pred ---CCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcC----CCC--CCC--
Confidence 223345678999999999999999999999999999999999999999876665555444321 110 000
Q ss_pred cCCCCCChhHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHH
Q 047739 1037 LELDPESSEWEEFLLGVKVALLCTAPDPIDRP-----TMSDIVF 1075 (1099)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RP-----s~~evl~ 1075 (1099)
. .. ..+.+++.+||+.||++|| +++||++
T Consensus 227 -----~-~s----~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 227 -----T-LS----PEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp -----T-SC----HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -----C-CC----HHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 0 01 1245789999999999999 8999975
No 75
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=366.01 Aligned_cols=264 Identities=23% Similarity=0.287 Sum_probs=212.9
Q ss_pred HhccccccccccccceeEEEEEEC--------CceEEEEEECCCCCcc--HHHHHHHHHHhhhc-cCCcceEEeeEEecC
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN--------DGMVLSIRRLPDGSLD--ENLFRKEAEFLGKV-RHRNLTVLRGYYAGA 870 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~--~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 870 (1099)
.++|.+.+.||+|+||.||+|.+. .+..||+|++...... .+.+.+|+++++++ +||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 468999999999999999999862 3468999998654332 36788999999999 899999999999854
Q ss_pred CCceEEEEeecCCCCHHHHHhhhcc-----------CCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECC
Q 047739 871 PDLRLLVYDYMPNGNLGTLLQEASH-----------QDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDA 939 (1099)
Q Consensus 871 ~~~~~lV~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~ 939 (1099)
...++||||+++|+|.+++..... .....+++..+..++.|+++||+|||+.+|+||||||+||+++.
T Consensus 148 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~ 226 (382)
T 3tt0_A 148 -GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 226 (382)
T ss_dssp -SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred -CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcC
Confidence 446999999999999999986432 12345899999999999999999999999999999999999999
Q ss_pred CCcEEEeccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHH
Q 047739 940 DFEAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKW 1018 (1099)
Q Consensus 940 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~ 1018 (1099)
++.+||+|||+++...... .........+|..|+|||++.+..++.++|||||||++|||++ |+.||......+..+.
T Consensus 227 ~~~~kL~DFG~a~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~ 305 (382)
T 3tt0_A 227 DNVMKIADFGLARDIHHID-YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 305 (382)
T ss_dssp TCCEEECSCSCCCCSSCCC-TTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH
T ss_pred CCcEEEcccCccccccccc-ccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 9999999999998653221 1223345567899999999999999999999999999999999 9999987766555444
Q ss_pred HHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCC
Q 047739 1019 VKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGP 1084 (1099)
Q Consensus 1019 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 1084 (1099)
+..... ... . .... ..+.+++.+||+.||++|||++||++.|+++....
T Consensus 306 ~~~~~~----~~~-~--------~~~~----~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 306 LKEGHR----MDK-P--------SNCT----NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp HHTTCC----CCC-C--------SSCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred HHcCCC----CCC-C--------ccCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 332211 000 0 1111 13457899999999999999999999999886433
No 76
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=8e-39 Score=353.74 Aligned_cols=256 Identities=27% Similarity=0.433 Sum_probs=211.5
Q ss_pred HhccccccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEeec
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYM 881 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e~~ 881 (1099)
.++|+..+.||+|+||.||+|..+++..||+|.+.......+.+.+|++++++++||||+++++++.++ ..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE--PIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSS--SCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcCC--CcEEEEecC
Confidence 468999999999999999999999888999999987777788899999999999999999999998733 358999999
Q ss_pred CCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCCCCC
Q 047739 882 PNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTPAEA 961 (1099)
Q Consensus 882 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 961 (1099)
++|+|.+++.... ...+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++..... ..
T Consensus 90 ~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~ 164 (279)
T 1qpc_A 90 ENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN--EY 164 (279)
T ss_dssp TTCBHHHHTTSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSS--CE
T ss_pred CCCCHHHHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCc--cc
Confidence 9999999997532 124899999999999999999999999999999999999999999999999999865321 11
Q ss_pred ccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhccccccccCcccCCC
Q 047739 962 STSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLELD 1040 (1099)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 1040 (1099)
.......++..|+|||.+.+..++.++||||+|++++||++ |+.||......+....+..... . ..
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~----~-~~-------- 231 (279)
T 1qpc_A 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR----M-VR-------- 231 (279)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC----C-CC--------
T ss_pred ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccC----C-CC--------
Confidence 22334567889999999998889999999999999999999 9999987666554443322110 0 00
Q ss_pred CCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhccc
Q 047739 1041 PESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCR 1081 (1099)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 1081 (1099)
+...+ ..+.+++.+||+.||++|||+.++++.|+++.
T Consensus 232 ~~~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 268 (279)
T 1qpc_A 232 PDNCP----EELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (279)
T ss_dssp CTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccccc----HHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 01111 13457899999999999999999999999764
No 77
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.4e-38 Score=351.23 Aligned_cols=264 Identities=22% Similarity=0.288 Sum_probs=204.4
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCC----ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS----LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLL 876 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 876 (1099)
.++|++.+.||+|+||.||+|... ++..||+|.+.... ...+.+.+|++++++++||||+++++++.. .+..++
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-~~~~~l 88 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEE-DDCYYL 88 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEEC-SSEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeee-CCeEEE
Confidence 357999999999999999999975 58899999884322 223678899999999999999999999884 455699
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCC
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIP 956 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 956 (1099)
||||+++|+|.+++... ..+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++....
T Consensus 89 v~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 163 (294)
T 4eqm_A 89 VMEYIEGPTLSEYIESH-----GPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163 (294)
T ss_dssp EEECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred EEeCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence 99999999999999764 2489999999999999999999999999999999999999999999999999986522
Q ss_pred CCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcc
Q 047739 957 TPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGL 1036 (1099)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1036 (1099)
..........||+.|+|||.+.+..++.++||||+|+++|||++|+.||........... .... ....... ..
T Consensus 164 --~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~---~~~~-~~~~~~~-~~ 236 (294)
T 4eqm_A 164 --TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIK---HIQD-SVPNVTT-DV 236 (294)
T ss_dssp -------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHH---HHSS-CCCCHHH-HS
T ss_pred --ccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH---Hhhc-cCCCcch-hc
Confidence 122233456799999999999999999999999999999999999999977654333221 1111 1111000 00
Q ss_pred cCCCCCChhHHHHHHHHHHHHhcCCCCCCCCC-CHHHHHHHhhcccCCCCC
Q 047739 1037 LELDPESSEWEEFLLGVKVALLCTAPDPIDRP-TMSDIVFMLEGCRVGPDI 1086 (1099)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RP-s~~evl~~L~~~~~~~~~ 1086 (1099)
.+.. + ..+.+++.+|++.||++|| ++.++.+.|+.+......
T Consensus 237 ---~~~~-~----~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~ 279 (294)
T 4eqm_A 237 ---RKDI-P----QSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRA 279 (294)
T ss_dssp ---CTTS-C----HHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSST
T ss_pred ---ccCC-C----HHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccC
Confidence 0000 0 1245789999999999998 999999999987655443
No 78
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=5.3e-39 Score=370.74 Aligned_cols=257 Identities=24% Similarity=0.337 Sum_probs=207.3
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCc--cHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL--DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVY 878 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 878 (1099)
.++|...+.||+|+||.||+|.+. +++.||+|.+..... ..+.|.+|++++++++||||+++++++... ...++||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-~~~~lv~ 191 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK-QPIYIVM 191 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSS-SSCEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecC-CCcEEEE
Confidence 468899999999999999999986 689999999875432 235688999999999999999999999854 4469999
Q ss_pred eecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCC
Q 047739 879 DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTP 958 (1099)
Q Consensus 879 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 958 (1099)
||+++|+|.++++... ..+++..+..++.|+++||+|||+.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 192 e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~- 266 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEG----ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADG- 266 (377)
T ss_dssp ECCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTS-
T ss_pred EcCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCC-
Confidence 9999999999997532 34889999999999999999999999999999999999999999999999999754211
Q ss_pred CCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhccccccccCccc
Q 047739 959 AEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLL 1037 (1099)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1037 (1099)
..........++..|+|||.+.+..++.++||||||+++|||++ |+.||......+....+.. +....
T Consensus 267 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~----~~~~~------- 335 (377)
T 3cbl_A 267 VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEK----GGRLP------- 335 (377)
T ss_dssp EEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHT----TCCCC-------
T ss_pred ceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc----CCCCC-------
Confidence 11111122346778999999998899999999999999999998 9999987665554443322 11000
Q ss_pred CCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhccc
Q 047739 1038 ELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCR 1081 (1099)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 1081 (1099)
.+...+ ..+.+++.+||+.||++|||+.+|++.|+++.
T Consensus 336 --~~~~~~----~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 373 (377)
T 3cbl_A 336 --CPELCP----DAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373 (377)
T ss_dssp --CCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CCCCCC----HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 011111 12457899999999999999999999998765
No 79
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2e-38 Score=374.48 Aligned_cols=253 Identities=27% Similarity=0.397 Sum_probs=209.1
Q ss_pred HhccccccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEeec
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYM 881 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e~~ 881 (1099)
.++|...+.||+|+||.||+|.++ |+.||||.+.... ..+.|.+|++++++++||||+++++++.......++||||+
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~ 269 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 269 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEec
Confidence 467889999999999999999987 7799999997644 55779999999999999999999999886665679999999
Q ss_pred CCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCCCCC
Q 047739 882 PNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTPAEA 961 (1099)
Q Consensus 882 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 961 (1099)
++|+|.++++... ...+++..+..++.||++||+|||+.+|+||||||+||+++.++.+||+|||+++....
T Consensus 270 ~~g~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~----- 341 (450)
T 1k9a_A 270 AKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS----- 341 (450)
T ss_dssp TTCBHHHHHHHHC---TTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred CCCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccc-----
Confidence 9999999998642 23478999999999999999999999999999999999999999999999999985421
Q ss_pred ccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhccccccccCcccCCC
Q 047739 962 STSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLELD 1040 (1099)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 1040 (1099)
......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+....+..... .. .
T Consensus 342 -~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~----~~---------~ 407 (450)
T 1k9a_A 342 -TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK----MD---------A 407 (450)
T ss_dssp ------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCC----CC---------C
T ss_pred -cccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC----CC---------C
Confidence 1223367889999999999999999999999999999998 9999987766655544432211 00 0
Q ss_pred CCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccC
Q 047739 1041 PESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRV 1082 (1099)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 1082 (1099)
+...+ ..+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 408 p~~~~----~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 408 PDGCP----PAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp CTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCcCC----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 11111 134578999999999999999999999998754
No 80
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.1e-38 Score=360.85 Aligned_cols=259 Identities=21% Similarity=0.335 Sum_probs=204.0
Q ss_pred HhccccccccccccceeEEEEEECC-ce----EEEEEECCCCC--ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCce
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYND-GM----VLSIRRLPDGS--LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR 874 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~-g~----~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 874 (1099)
.++|+..++||+|+||.||+|.+.. +. +||+|.+.... ...+.+.+|++++++++||||+++++++... ..
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~ 91 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS--TV 91 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS--SE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC--Ce
Confidence 4579999999999999999999753 33 46888885432 3457799999999999999999999999853 35
Q ss_pred EEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccccc
Q 047739 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLT 954 (1099)
Q Consensus 875 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~ 954 (1099)
++|+||+++|+|.+++... ...+++..++.++.|+++||+|||+.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 92 ~~v~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 167 (327)
T 3poz_A 92 QLITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEEEECCTTCBHHHHHHHS----TTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred EEEEEecCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEc
Confidence 8999999999999999753 245899999999999999999999999999999999999999999999999999865
Q ss_pred CCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhcccccccc
Q 047739 955 IPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLE 1033 (1099)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 1033 (1099)
... ..........+|..|+|||++.+..++.++|||||||++|||++ |+.||...........+....... .
T Consensus 168 ~~~-~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~-----~- 240 (327)
T 3poz_A 168 GAE-EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP-----Q- 240 (327)
T ss_dssp TTT-CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC-----C-
T ss_pred cCC-cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCC-----C-
Confidence 322 12223334567889999999999999999999999999999999 999998776666554433221100 0
Q ss_pred CcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCC
Q 047739 1034 PGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGP 1084 (1099)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 1084 (1099)
+.... ..+.+++.+||+.||++||++.|+++.|+.+...+
T Consensus 241 -------~~~~~----~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~ 280 (327)
T 3poz_A 241 -------PPICT----IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp -------CTTBC----HHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTSH
T ss_pred -------CccCC----HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhhh
Confidence 01111 13457899999999999999999999998876543
No 81
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.3e-38 Score=360.09 Aligned_cols=259 Identities=22% Similarity=0.326 Sum_probs=205.1
Q ss_pred HhccccccccccccceeEEEEEECC-ce----EEEEEECCCCC--ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCce
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYND-GM----VLSIRRLPDGS--LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR 874 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~-g~----~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 874 (1099)
.++|+..++||+|+||.||+|.+.. +. +|++|.+.... ...+.+.+|+.++++++||||+++++++.+ ...
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~ 89 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG--SSL 89 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB--SSE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--Ccc
Confidence 3578999999999999999999753 33 48888875432 223567899999999999999999999863 346
Q ss_pred EEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccccc
Q 047739 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLT 954 (1099)
Q Consensus 875 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~ 954 (1099)
++||||+++|+|.+++... ...+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++..
T Consensus 90 ~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 90 QLVTQYLPLGSLLDHVRQH----RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp EEEEECCTTCBSHHHHHSS----GGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred EEEEEeCCCCCHHHHHHHc----cccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCccccc
Confidence 8999999999999999753 235889999999999999999999999999999999999999999999999999875
Q ss_pred CCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhcccccccc
Q 047739 955 IPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLE 1033 (1099)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 1033 (1099)
... ..........||..|+|||++.+..++.++||||+|+++|||++ |+.||......+....+..... ........
T Consensus 166 ~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~ 243 (325)
T 3kex_A 166 PPD-DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGER-LAQPQICT 243 (325)
T ss_dssp CCC-TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCB-CCCCTTBC
T ss_pred Ccc-cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCC-CCCCCcCc
Confidence 322 22233445678889999999999999999999999999999999 9999987666555544432211 11111111
Q ss_pred CcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCC
Q 047739 1034 PGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGP 1084 (1099)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 1084 (1099)
+ .+.+++.+||+.||++||++.|+++.|+++...+
T Consensus 244 ~----------------~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 244 I----------------DVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp T----------------TTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred H----------------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 1 1247899999999999999999999999886544
No 82
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=5.7e-38 Score=358.26 Aligned_cols=250 Identities=19% Similarity=0.266 Sum_probs=204.3
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCc-------cHHHHHHHHHHhhhccCCcceEEeeEEecCCCc
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL-------DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 873 (1099)
.++|++.+.||+|+||.||+|... +|..||+|.+..... ..+.+.+|++++++++||||+++++++.+ ...
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~ 89 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN-RTD 89 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe-CCE
Confidence 467999999999999999999986 589999999854322 34679999999999999999999999985 456
Q ss_pred eEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCC----cEEEeccc
Q 047739 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADF----EAHLSDFG 949 (1099)
Q Consensus 874 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~----~~kl~DfG 949 (1099)
.++||||+++|+|.+++... ..+++..+..++.||+.||+|||+.||+||||||+||+++.++ .+||+|||
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG 164 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTC-----SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCS
T ss_pred EEEEEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecC
Confidence 79999999999999999642 3589999999999999999999999999999999999998776 79999999
Q ss_pred cccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhcccc
Q 047739 950 LDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQIT 1029 (1099)
Q Consensus 950 la~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 1029 (1099)
+++.... .......+||+.|+|||++.+..++.++||||+||++|||++|..||......+....+..... ...
T Consensus 165 ~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~--~~~ 238 (361)
T 2yab_A 165 LAHEIED----GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSY--DFD 238 (361)
T ss_dssp SCEECCT----TCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCC--CCC
T ss_pred CceEcCC----CCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC--CCC
Confidence 9986532 2233456799999999999988999999999999999999999999987766555544332110 000
Q ss_pred ccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1030 ELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1030 ~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
....+.. -..+.+++.+||..||++|||+.|+++
T Consensus 239 ~~~~~~~------------s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 239 EEFFSQT------------SELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHHHTTS------------CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred chhccCC------------CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0000000 013457999999999999999999986
No 83
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.8e-38 Score=348.50 Aligned_cols=257 Identities=23% Similarity=0.375 Sum_probs=213.0
Q ss_pred HhccccccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEeec
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYM 881 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e~~ 881 (1099)
.++|...+.||+|+||.||+|.+.++..||+|.+.......+.+.+|++++++++||||+++++++.+. ...++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ-APICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSS-SSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccC-CCeEEEEeCC
Confidence 467899999999999999999998899999999988777778899999999999999999999999854 4569999999
Q ss_pred CCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCCCCC
Q 047739 882 PNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTPAEA 961 (1099)
Q Consensus 882 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 961 (1099)
++|+|.+++... ...+++..+..++.|+++||+|||+.+|+||||||+||+++.++.+||+|||+++.... ...
T Consensus 86 ~~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~--~~~ 159 (267)
T 3t9t_A 86 EHGCLSDYLRTQ----RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD--DQY 159 (267)
T ss_dssp TTCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCC--HHH
T ss_pred CCCcHHHHHhhC----cccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccc--ccc
Confidence 999999999753 23488999999999999999999999999999999999999999999999999986521 111
Q ss_pred ccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhccccccccCcccCCC
Q 047739 962 STSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLELD 1040 (1099)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 1040 (1099)
.......++..|+|||++.+..++.++||||+|+++|||++ |+.||......+....+..... .. .
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~-----~~-~------- 226 (267)
T 3t9t_A 160 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR-----LY-K------- 226 (267)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC-----CC-C-------
T ss_pred cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCc-----CC-C-------
Confidence 22334567889999999998899999999999999999999 8999987665554443332110 00 0
Q ss_pred CCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccC
Q 047739 1041 PESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRV 1082 (1099)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 1082 (1099)
+.... ..+.+++.+||+.||++||++.|+++.|+++..
T Consensus 227 ~~~~~----~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 227 PRLAS----THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp CTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CccCc----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 01111 124578999999999999999999999998753
No 84
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.2e-37 Score=349.72 Aligned_cols=263 Identities=24% Similarity=0.351 Sum_probs=204.4
Q ss_pred HhccccccccccccceeEEEEEECCceEEEEEECCCCCcc---HHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLD---ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVY 878 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 878 (1099)
.++|++.++||+|+||.||+|.+.+|+.||+|++...... .+.+.+|++++++++||||+++++++.+. ...++||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~~lv~ 98 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSE-RCLTLVF 98 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCS-SCEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccC-CEEEEEE
Confidence 4689999999999999999999988999999998654332 36788999999999999999999999854 4569999
Q ss_pred eecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCC
Q 047739 879 DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTP 958 (1099)
Q Consensus 879 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 958 (1099)
||++ |+|.+++... ...+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++....
T Consensus 99 e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~-- 171 (311)
T 3niz_A 99 EFME-KDLKKVLDEN----KTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGI-- 171 (311)
T ss_dssp ECCS-EEHHHHHHTC----TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTS--
T ss_pred cCCC-CCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCC--
Confidence 9997 5888888642 24489999999999999999999999999999999999999999999999999986521
Q ss_pred CCCccccccccCccccCcccccc-CCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccc-----
Q 047739 959 AEASTSTTAVGTLGYVSPEAALT-GETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELL----- 1032 (1099)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~----- 1032 (1099)
.........||..|+|||++.+ ..++.++||||+||++|||++|+.||......+....+.............
T Consensus 172 -~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 250 (311)
T 3niz_A 172 -PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQEL 250 (311)
T ss_dssp -CCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTS
T ss_pred -CcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhcc
Confidence 1223345678999999999876 568999999999999999999999998877766666655543322111100
Q ss_pred ----cCcccCCCCCChhHHHH-----HHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1033 ----EPGLLELDPESSEWEEF-----LLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1033 ----d~~~~~~~~~~~~~~~~-----~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
....... ....+... ..+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 251 PLWKQRTFQVF--EKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHHSCCCCCC--CCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred chhhhcccccc--cCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000000 01111111 23468999999999999999999987
No 85
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3.9e-38 Score=351.21 Aligned_cols=264 Identities=22% Similarity=0.337 Sum_probs=201.9
Q ss_pred HhccccccccccccceeEEEEEE-----CCceEEEEEECCCCCcc-HHHHHHHHHHhhhccCCcceEEeeEEecC-CCce
Q 047739 802 TRQFDEENVLSRTRYGLVFKACY-----NDGMVLSIRRLPDGSLD-ENLFRKEAEFLGKVRHRNLTVLRGYYAGA-PDLR 874 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~ 874 (1099)
.++|++.+.||+|+||.||+|++ .+++.||+|++...... .+.+.+|++++++++||||+++++++... ....
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 46799999999999999999985 25899999998754433 36789999999999999999999998632 2346
Q ss_pred EEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccccc
Q 047739 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLT 954 (1099)
Q Consensus 875 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~ 954 (1099)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+|+||||||+||+++.++.+||+|||+++..
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~ 164 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCG----GGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC--
T ss_pred EEEEEeCCCCCHHHHHHhcc----cccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccc
Confidence 89999999999999997632 34899999999999999999999999999999999999999999999999999865
Q ss_pred CCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchh------------HHHHHHHH
Q 047739 955 IPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDED------------IVKWVKKQ 1022 (1099)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~------------~~~~~~~~ 1022 (1099)
..............++..|+|||.+.+..++.++||||||+++|||++|..|+.....+. ....+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (295)
T 3ugc_A 165 PQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 244 (295)
T ss_dssp -----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHH
T ss_pred cCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHH
Confidence 333222233345567888999999999999999999999999999999999985432110 00111111
Q ss_pred hhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccC
Q 047739 1023 LQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRV 1082 (1099)
Q Consensus 1023 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 1082 (1099)
...+.. ...+...+ ..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 245 ~~~~~~---------~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 245 LKNNGR---------LPRPDGCP----DEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp HHTTCC---------CCCCTTCC----HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhccCc---------CCCCcCcC----HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 111110 00011111 134578999999999999999999999998753
No 86
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=5e-37 Score=365.14 Aligned_cols=348 Identities=25% Similarity=0.370 Sum_probs=278.0
Q ss_pred CceeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEc
Q 047739 294 SVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDL 373 (1099)
Q Consensus 294 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 373 (1099)
+.++.|++++|.++. +| .+..+++|++|||++|.+++..+ +.++++|++|++++|.+.+..+ +.++++|++|+|
T Consensus 46 ~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 119 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 119 (466)
T ss_dssp HTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred ccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEEC
Confidence 457888888888875 34 37778888888888888886544 8888888888888888886544 888888888888
Q ss_pred cCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccc
Q 047739 374 EGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGE 453 (1099)
Q Consensus 374 s~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 453 (1099)
++|++++. +. +..+++|++|++++|.+.+. ..+.++++|++|+++ |.+.+.. .+.++++|+.|++++|.+++.
T Consensus 120 ~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~ 192 (466)
T 1o6v_A 120 FNNQITDI-DP-LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI 192 (466)
T ss_dssp CSSCCCCC-GG-GTTCTTCSEEEEEEEEECCC--GGGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC
T ss_pred CCCCCCCC-hH-HcCCCCCCEEECCCCccCCC--hhhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC
Confidence 88888854 33 78888888888888888764 248888888888886 4555332 378888888888888888754
Q ss_pred cCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhcc
Q 047739 454 VPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSL 533 (1099)
Q Consensus 454 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 533 (1099)
..+.++++|+.|++++|.+++..| ++.+++|++|++++|++++. ..+..+++|+.|++++|.+++..+ +..+
T Consensus 193 --~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l 264 (466)
T 1o6v_A 193 --SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGL 264 (466)
T ss_dssp --GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTC
T ss_pred --hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcC
Confidence 347888888888888888886655 67788889999998888753 357788889999999998886544 7888
Q ss_pred cccceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccCcccEEec
Q 047739 534 MSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDL 613 (1099)
Q Consensus 534 ~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 613 (1099)
++|++|++++|.+++..+ +..+++|+.|++++|++++..+ ++.+++|++|+|++|++++..| +..+++|+.|++
T Consensus 265 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l 338 (466)
T 1o6v_A 265 TKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFF 338 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEEC
T ss_pred CCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeEC
Confidence 889999999998886544 7788889999999998886544 7888899999999999986554 788899999999
Q ss_pred cCccccccCCcccCCCCCCCEEECcCccccccCChhhhccCCCCeeecCCCcCCCcCCCC
Q 047739 614 SINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLSGEIPAN 673 (1099)
Q Consensus 614 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~ 673 (1099)
++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|++++ +|..
T Consensus 339 ~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~-~p~~ 393 (466)
T 1o6v_A 339 YNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN-APVN 393 (466)
T ss_dssp CSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC-CCBC
T ss_pred CCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC-Cchh
Confidence 99998864 468889999999999999987766 8888999999999999886 3443
No 87
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.7e-38 Score=352.95 Aligned_cols=277 Identities=19% Similarity=0.208 Sum_probs=208.6
Q ss_pred hccccccccccccceeEEEEEECC-ceEEEEEECCCCC--ccHHHHHHHHHHhhhccCCcceEEeeEEecCC-CceEEEE
Q 047739 803 RQFDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGS--LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAP-DLRLLVY 878 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~~lV~ 878 (1099)
++|.+.++||+|+||.||+|.+.. ++.||+|++.... ...+.+.+|++++++++||||+++++++.... ...++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 578999999999999999999864 8999999986433 23467889999999999999999999987543 3568999
Q ss_pred eecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEE----CCCCcEEEecccccccc
Q 047739 879 DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLF----DADFEAHLSDFGLDRLT 954 (1099)
Q Consensus 879 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll----~~~~~~kl~DfGla~~~ 954 (1099)
||+++|+|.+++..... ...+++..+..++.|+++||+|||+.||+||||||+||++ +.++.+||+|||+++..
T Consensus 89 e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~ 166 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (319)
T ss_dssp ECCTTCBHHHHHHSGGG--TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEEC
T ss_pred eCCCCCCHHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceec
Confidence 99999999999986432 2348999999999999999999999999999999999999 78888999999999865
Q ss_pred CCCCCCCccccccccCccccCccccc--------cCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhc
Q 047739 955 IPTPAEASTSTTAVGTLGYVSPEAAL--------TGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKG 1026 (1099)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 1026 (1099)
.. ........||..|+|||++. +..++.++|||||||++|||++|+.||...........+...+..+
T Consensus 167 ~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (319)
T 4euu_A 167 ED----DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (319)
T ss_dssp CT----TCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred CC----CCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence 22 22334567999999999886 5678999999999999999999999997543322212222221111
Q ss_pred cccc----cc---cCc--cc-CCCC-CChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCCC
Q 047739 1027 QITE----LL---EPG--LL-ELDP-ESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPD 1085 (1099)
Q Consensus 1027 ~~~~----~~---d~~--~~-~~~~-~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 1085 (1099)
.... .. ... +. .... .......-..+.+++.+||+.||++|||++|+++...+.....+
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~~~ 312 (319)
T 4euu_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRGN 312 (319)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC---
T ss_pred CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhcCC
Confidence 1100 00 000 00 0011 11112222345689999999999999999999999887655443
No 88
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2e-38 Score=382.05 Aligned_cols=255 Identities=28% Similarity=0.444 Sum_probs=211.3
Q ss_pred HhccccccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEeec
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYM 881 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e~~ 881 (1099)
.++|.+.++||+|+||.||+|.++++..||||++.......+.|.+|++++++++||||+++++++.+ ...++||||+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~lv~e~~ 343 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYM 343 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEECCC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee--ccceEeeehh
Confidence 56789999999999999999999988899999998777777889999999999999999999999875 3469999999
Q ss_pred CCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCCCCC
Q 047739 882 PNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTPAEA 961 (1099)
Q Consensus 882 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 961 (1099)
++|+|.++++... ...+++..+..|+.||++||+|||+.+|+||||||+|||++.++.+||+|||+++.... ...
T Consensus 344 ~~gsL~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~--~~~ 418 (535)
T 2h8h_A 344 SKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEY 418 (535)
T ss_dssp TTEEHHHHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCC--HHH
T ss_pred cCCcHHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCC--Cce
Confidence 9999999997532 23488999999999999999999999999999999999999999999999999986521 111
Q ss_pred ccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhccccccccCcccCCC
Q 047739 962 STSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLELD 1040 (1099)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 1040 (1099)
.......++..|+|||++....++.++|||||||++|||++ |+.||......+....+..... .. .
T Consensus 419 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~----~~-~-------- 485 (535)
T 2h8h_A 419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR----MP-C-------- 485 (535)
T ss_dssp HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCC----CC-C--------
T ss_pred ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC----CC-C--------
Confidence 12234457789999999999999999999999999999999 9999987666555444332111 00 0
Q ss_pred CCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcc
Q 047739 1041 PESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGC 1080 (1099)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~ 1080 (1099)
+.... ..+.+++.+||+.||++|||+++|++.|+++
T Consensus 486 ~~~~~----~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 521 (535)
T 2h8h_A 486 PPECP----ESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 521 (535)
T ss_dssp CTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred CCCCC----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 01111 1245789999999999999999999999966
No 89
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.3e-38 Score=371.56 Aligned_cols=260 Identities=23% Similarity=0.279 Sum_probs=208.0
Q ss_pred HHHHHHhccccccccccccceeEEEEEECC-ceEEEEEECCCCC----ccHHHHHHHHHHhhhccCCcceEEeeEEecCC
Q 047739 797 ETVEATRQFDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGS----LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAP 871 (1099)
Q Consensus 797 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 871 (1099)
+.....++|+..++||+|+||.||+|++++ ++.||+|++.... ...+.+.+|+.++++++||||+++++++.+ +
T Consensus 68 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~-~ 146 (437)
T 4aw2_A 68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD-D 146 (437)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC-S
T ss_pred cccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-C
Confidence 333456789999999999999999999875 7899999985321 122448899999999999999999999985 4
Q ss_pred CceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccc
Q 047739 872 DLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLD 951 (1099)
Q Consensus 872 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla 951 (1099)
...|+||||+++|+|.+++.+. ...+++..+..++.||+.||+|||+.+|+||||||+|||++.++.+||+|||+|
T Consensus 147 ~~~~lV~Ey~~gg~L~~~l~~~----~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla 222 (437)
T 4aw2_A 147 NNLYLVMDYYVGGDLLTLLSKF----EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSC 222 (437)
T ss_dssp SEEEEEECCCTTCBHHHHHHTT----TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEecCCCCcHHHHHHHc----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhh
Confidence 5579999999999999999752 245899999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCccccccccCccccCccccc-----cCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhc
Q 047739 952 RLTIPTPAEASTSTTAVGTLGYVSPEAAL-----TGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKG 1026 (1099)
Q Consensus 952 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 1026 (1099)
+.... .........+||+.|+|||++. ...++.++||||+||++|||++|+.||......+....+.......
T Consensus 223 ~~~~~--~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~ 300 (437)
T 4aw2_A 223 LKLME--DGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF 300 (437)
T ss_dssp EECCT--TSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC
T ss_pred hhccc--CCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccc
Confidence 76522 2222334568999999999987 4568999999999999999999999998877666665554332222
Q ss_pred cccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCC--CCCHHHHHHH
Q 047739 1027 QITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPID--RPTMSDIVFM 1076 (1099)
Q Consensus 1027 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~--RPs~~evl~~ 1076 (1099)
..+... .. .. ..+.+++.+|+..+|++ ||+++|+++.
T Consensus 301 ~~p~~~----~~---~s------~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 301 QFPTQV----TD---VS------ENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp CCCSSC----CC---SC------HHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred cCCccc----cc---CC------HHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 111110 00 01 12357899999888888 9999999873
No 90
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=5.5e-38 Score=359.61 Aligned_cols=253 Identities=17% Similarity=0.267 Sum_probs=193.7
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEee
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDY 880 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e~ 880 (1099)
.++|...+.||+|+||.||+|... +++.||+|.+.......+.+.+|+.++++++||||+++++++.. +...++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILT-PTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEee-CCEEEEEEEe
Confidence 457999999999999999999986 68999999997666666789999999999999999999999985 4557999999
Q ss_pred cCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCc--EEEeccccccccCCCC
Q 047739 881 MPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFE--AHLSDFGLDRLTIPTP 958 (1099)
Q Consensus 881 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~--~kl~DfGla~~~~~~~ 958 (1099)
+++|+|.+++... ..+++..+..++.|+++||+|||+.||+||||||+||+++.++. +||+|||+++...
T Consensus 98 ~~~~~L~~~l~~~-----~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~--- 169 (361)
T 3uc3_A 98 ASGGELYERICNA-----GRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV--- 169 (361)
T ss_dssp CCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred CCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCcccccc---
Confidence 9999999999753 24899999999999999999999999999999999999987765 9999999997431
Q ss_pred CCCccccccccCccccCccccccCCCCCc-CchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCccc
Q 047739 959 AEASTSTTAVGTLGYVSPEAALTGETTKE-SDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLL 1037 (1099)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1037 (1099)
........+||+.|+|||++.+..++.+ +||||+||++|||++|+.||...............+.........+..
T Consensus 170 -~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 246 (361)
T 3uc3_A 170 -LHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIR-- 246 (361)
T ss_dssp ------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSC--
T ss_pred -ccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCC--
Confidence 1222345679999999999988887665 899999999999999999997654433232222222221110000000
Q ss_pred CCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1038 ELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
.. ..+.+++.+||+.||++|||+.|+++.
T Consensus 247 ------~s----~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 247 ------IS----PECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ------CC----HHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ------CC----HHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 00 124579999999999999999999874
No 91
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2.6e-38 Score=363.60 Aligned_cols=269 Identities=17% Similarity=0.197 Sum_probs=203.1
Q ss_pred HhccccccccccccceeEEEEEECC------ceEEEEEECCCCCcc------------HHHHHHHHHHhhhccCCcceEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYND------GMVLSIRRLPDGSLD------------ENLFRKEAEFLGKVRHRNLTVL 863 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~------------~~~~~~E~~~l~~l~H~niv~l 863 (1099)
.++|.+.+.||+|+||.||+|.+.. ++.||+|.+...... ...+..|+..+++++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4589999999999999999999865 478999998654321 1123345566677789999999
Q ss_pred eeEEecCC---CceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEEC--
Q 047739 864 RGYYAGAP---DLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFD-- 938 (1099)
Q Consensus 864 ~~~~~~~~---~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~-- 938 (1099)
++++.... ...++||||+ +|+|.+++... ...+++..+..++.||+.||+|||+.+|+||||||+||+++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~----~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN----AKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESS
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecC
Confidence 99987532 3468999999 99999999753 24589999999999999999999999999999999999999
Q ss_pred CCCcEEEeccccccccCCCCCC----CccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCC-ch
Q 047739 939 ADFEAHLSDFGLDRLTIPTPAE----ASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQ-DE 1013 (1099)
Q Consensus 939 ~~~~~kl~DfGla~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~-~~ 1013 (1099)
.++.+||+|||+++........ ........||+.|+|||++.+..++.++|||||||++|||++|+.||.... +.
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~ 268 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP 268 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence 8899999999999765322111 112244569999999999999999999999999999999999999998533 33
Q ss_pred hHHHHHHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCC
Q 047739 1014 DIVKWVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVG 1083 (1099)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 1083 (1099)
......... ....+.+.+++.+.. ...+ ..+.+++..||+.||++||++.+|++.|+++...
T Consensus 269 ~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~----~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~ 330 (364)
T 3op5_A 269 KYVRDSKIR-YRENIASLMDKCFPA---ANAP----GEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA 330 (364)
T ss_dssp HHHHHHHHH-HHHCHHHHHHHHSCT---TCCC----HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-hhhhHHHHHHHhccc---ccCH----HHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 333222222 222233333322210 0001 1345789999999999999999999998876543
No 92
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=3.5e-38 Score=346.98 Aligned_cols=249 Identities=25% Similarity=0.390 Sum_probs=193.2
Q ss_pred hccccccccccccceeEEEEEECCceEEEEEECCCCCc-----cHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEE
Q 047739 803 RQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSL-----DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLV 877 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 877 (1099)
++|+..+.||+|+||.||+|.+. |..||+|.+..... ..+.+.+|++++++++||||+++++++... ...++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~lv 84 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKE-PNLCLV 84 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC---CEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC-CceEEE
Confidence 57899999999999999999986 88899999864322 236789999999999999999999999854 446999
Q ss_pred EeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCC---ceecCCCCCCEEECC--------CCcEEEe
Q 047739 878 YDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSN---MVHGDIKPQNVLFDA--------DFEAHLS 946 (1099)
Q Consensus 878 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~---iiH~Dlk~~NIll~~--------~~~~kl~ 946 (1099)
|||+++|+|.+++.. ..+++..+..++.|+++||+|||+.+ |+||||||+||+++. ++.+||+
T Consensus 85 ~e~~~~~~L~~~~~~------~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~ 158 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG------KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158 (271)
T ss_dssp EECCTTEEHHHHHTS------SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEEC
T ss_pred EEcCCCCCHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEc
Confidence 999999999999863 34899999999999999999999998 999999999999986 6789999
Q ss_pred ccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhc
Q 047739 947 DFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKG 1026 (1099)
Q Consensus 947 DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 1026 (1099)
|||+++.... .......||+.|+|||.+.+..++.++||||+|+++|||++|+.||...........+.. .
T Consensus 159 Dfg~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~----~ 229 (271)
T 3dtc_A 159 DFGLAREWHR-----TTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAM----N 229 (271)
T ss_dssp CCCC------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHT----S
T ss_pred cCCccccccc-----ccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhc----C
Confidence 9999975422 122345799999999999999999999999999999999999999987655443332221 1
Q ss_pred cccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcc
Q 047739 1027 QITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGC 1080 (1099)
Q Consensus 1027 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~ 1080 (1099)
....... ...+ ..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 230 ~~~~~~~--------~~~~----~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 230 KLALPIP--------STCP----EPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp CCCCCCC--------TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred CCCCCCC--------cccC----HHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 1110011 1111 1345789999999999999999999999864
No 93
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.9e-38 Score=357.17 Aligned_cols=273 Identities=20% Similarity=0.329 Sum_probs=199.7
Q ss_pred HHhccccccccccccceeEEEEEECCc----eEEEEEECCCC---CccHHHHHHHHHHhhhccCCcceEEeeEEecCCCc
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYNDG----MVLSIRRLPDG---SLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g----~~vavK~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 873 (1099)
..++|+..+.||+|+||.||+|.+... ..||+|.+... ....+.+.+|++++++++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 356799999999999999999987643 27999998653 23357799999999999999999999998754322
Q ss_pred -----eEEEEeecCCCCHHHHHhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEec
Q 047739 874 -----RLLVYDYMPNGNLGTLLQEASHQ-DGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSD 947 (1099)
Q Consensus 874 -----~~lV~e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~D 947 (1099)
.++||||+++|+|.+++...... ....+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~D 180 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVAD 180 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECC
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEee
Confidence 38999999999999999764322 223589999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhc
Q 047739 948 FGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKG 1026 (1099)
Q Consensus 948 fGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~ 1026 (1099)
||+++...... .........+++.|+|||.+.+..++.++||||+|+++|||++ |+.||......+....+.....
T Consensus 181 fg~a~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~-- 257 (323)
T 3qup_A 181 FGLSRKIYSGD-YYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNR-- 257 (323)
T ss_dssp CCC------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCC--
T ss_pred ccccccccccc-cccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCC--
Confidence 99998652221 1122334567889999999999999999999999999999999 9999987776665554432211
Q ss_pred cccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCCCCCCCCC
Q 047739 1027 QITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPDIPSSAD 1091 (1099)
Q Consensus 1027 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~ 1091 (1099)
... .+ . .. ..+.+++.+||+.||++|||+.|+++.|+++...++......
T Consensus 258 --~~~-~~-------~-~~----~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~ 307 (323)
T 3qup_A 258 --LKQ-PP-------E-CM----EEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQ 307 (323)
T ss_dssp --CCC-CT-------T-CC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--------
T ss_pred --CCC-CC-------c-cC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCCC
Confidence 000 00 0 00 134689999999999999999999999999988877655443
No 94
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=4.1e-38 Score=359.23 Aligned_cols=264 Identities=24% Similarity=0.395 Sum_probs=210.5
Q ss_pred HHhccccccccccccceeEEEEEEC------CceEEEEEECCCCCc--cHHHHHHHHHHhhhccCCcceEEeeEEecCCC
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYN------DGMVLSIRRLPDGSL--DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPD 872 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 872 (1099)
..++|+..+.||+|+||.||+|.+. +++.||+|.+..... ..+.+.+|++++++++||||+++++++... .
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~ 123 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG-K 123 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS-S
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC-C
Confidence 4678999999999999999999975 358999999975432 246789999999999999999999999854 4
Q ss_pred ceEEEEeecCCCCHHHHHhhhccC-------------------CCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCC
Q 047739 873 LRLLVYDYMPNGNLGTLLQEASHQ-------------------DGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933 (1099)
Q Consensus 873 ~~~lV~e~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~ 933 (1099)
..++||||+++|+|.+++...... ....+++..++.++.||++||+|||+.+|+||||||+
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~ 203 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATR 203 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcc
Confidence 569999999999999999864211 1256899999999999999999999999999999999
Q ss_pred CEEECCCCcEEEeccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCc
Q 047739 934 NVLFDADFEAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQD 1012 (1099)
Q Consensus 934 NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~ 1012 (1099)
||+++.++.+||+|||+++...... .........+|..|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus 204 NIl~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 282 (343)
T 1luf_A 204 NCLVGENMVVKIADFGLSRNIYSAD-YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 282 (343)
T ss_dssp GEEECGGGCEEECCCSCHHHHTGGG-CBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred eEEECCCCeEEEeecCCCcccccCc-cccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh
Confidence 9999999999999999997542211 1122344578899999999999899999999999999999999 9999987666
Q ss_pred hhHHHHHHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCC
Q 047739 1013 EDIVKWVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVG 1083 (1099)
Q Consensus 1013 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 1083 (1099)
.+....+.. +..... . ...+ ..+.+++.+||+.||++||++.|+++.|+++...
T Consensus 283 ~~~~~~~~~----~~~~~~-~--------~~~~----~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 283 EEVIYYVRD----GNILAC-P--------ENCP----LELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp HHHHHHHHT----TCCCCC-C--------TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred HHHHHHHhC----CCcCCC-C--------CCCC----HHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 554443322 211111 0 1111 1345789999999999999999999999988654
No 95
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.6e-38 Score=350.69 Aligned_cols=253 Identities=24% Similarity=0.368 Sum_probs=196.5
Q ss_pred HhccccccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEeec
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYM 881 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e~~ 881 (1099)
.++|++.+.||+|+||.||+|.+. ++.||+|.+... ...+.+.+|++++++++||||+++++++.+ ..++||||+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---~~~lv~e~~ 81 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACLN---PVCLVMEYA 81 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST-THHHHHHHHHHHHHHCCCTTBCCEEEBCTT---TTEEEEECC
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC---CcEEEEEcC
Confidence 357899999999999999999986 788999998643 345779999999999999999999998863 258999999
Q ss_pred CCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHcc---CCceecCCCCCCEEECCCCc-EEEeccccccccCCC
Q 047739 882 PNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHT---SNMVHGDIKPQNVLFDADFE-AHLSDFGLDRLTIPT 957 (1099)
Q Consensus 882 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~---~~iiH~Dlk~~NIll~~~~~-~kl~DfGla~~~~~~ 957 (1099)
++|+|.+++.... ....+++..++.++.|+++||+|||+ .||+||||||+||+++.++. +||+|||+++....
T Consensus 82 ~~~~L~~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~- 158 (307)
T 2eva_A 82 EGGSLYNVLHGAE--PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT- 158 (307)
T ss_dssp TTCBHHHHHHCSS--SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred CCCCHHHHHhccC--CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc-
Confidence 9999999997532 22347889999999999999999999 89999999999999998886 79999999975421
Q ss_pred CCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCccc
Q 047739 958 PAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLL 1037 (1099)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1037 (1099)
......||..|+|||++.+..++.++||||||+++|||++|+.||......... .. .....+...... .
T Consensus 159 -----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-~~-~~~~~~~~~~~~-~--- 227 (307)
T 2eva_A 159 -----HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR-IM-WAVHNGTRPPLI-K--- 227 (307)
T ss_dssp -----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHH-HH-HHHHTTCCCCCB-T---
T ss_pred -----ccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHH-HH-HHHhcCCCCCcc-c---
Confidence 123456999999999999999999999999999999999999999754332211 11 111111111110 0
Q ss_pred CCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccC
Q 047739 1038 ELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRV 1082 (1099)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 1082 (1099)
..+ ..+.+++.+||+.||++|||++|+++.|+.+..
T Consensus 228 -----~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 228 -----NLP----KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp -----TCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred -----ccC----HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 001 124578999999999999999999999988754
No 96
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=7.2e-38 Score=344.38 Aligned_cols=253 Identities=25% Similarity=0.337 Sum_probs=204.5
Q ss_pred HhccccccccccccceeEEEEEECCceEEEEEECCCCCcc---HHHHHHHHHHhhhccCCcceEEeeEEecC-CCceEEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLD---ENLFRKEAEFLGKVRHRNLTVLRGYYAGA-PDLRLLV 877 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~~lV 877 (1099)
.++|...+.||+|+||.||+|.++ +..||+|.+...... .+.+.+|++++++++||||+++++++.+. ....++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 357999999999999999999986 888999998654332 35789999999999999999999999754 2456999
Q ss_pred EeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCC--ceecCCCCCCEEECCCCcEEEeccccccccC
Q 047739 878 YDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSN--MVHGDIKPQNVLFDADFEAHLSDFGLDRLTI 955 (1099)
Q Consensus 878 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~--iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 955 (1099)
|||+++|+|.+++... ....+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.++++|||++...
T Consensus 88 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~- 163 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEG---TNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF- 163 (271)
T ss_dssp EECCTTCBHHHHHHSC---SSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT-
T ss_pred ecccCCCcHHHHHhhc---ccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeee-
Confidence 9999999999999752 2235899999999999999999999999 999999999999999999999999987542
Q ss_pred CCCCCCccccccccCccccCccccccCCCCC---cCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccc
Q 047739 956 PTPAEASTSTTAVGTLGYVSPEAALTGETTK---ESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELL 1032 (1099)
Q Consensus 956 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1099)
......||+.|+|||.+.+..++. ++||||+|+++|||++|+.||......+....+........ .
T Consensus 164 -------~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~----~ 232 (271)
T 3kmu_A 164 -------QSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPT----I 232 (271)
T ss_dssp -------SCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCC----C
T ss_pred -------cccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCC----C
Confidence 122357899999999998765544 79999999999999999999987665544333322211111 1
Q ss_pred cCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccC
Q 047739 1033 EPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRV 1082 (1099)
Q Consensus 1033 d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 1082 (1099)
... .+ ..+.+++.+||+.||++|||++|+++.|+++..
T Consensus 233 ~~~--------~~----~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 233 PPG--------IS----PHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CTT--------CC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CCC--------CC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 111 11 124578999999999999999999999998753
No 97
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=5e-38 Score=347.69 Aligned_cols=255 Identities=21% Similarity=0.340 Sum_probs=197.2
Q ss_pred HhccccccccccccceeEEEEEECC----ceEEEEEECCCCCc--cHHHHHHHHHHhhhccCCcceEEeeEEecCCCceE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYND----GMVLSIRRLPDGSL--DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 875 (1099)
.++|++.+.||+|+||.||+|.+.. +..||+|.+..... ..+.+.+|+.++++++||||+++++++.+ +..+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~ 91 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE--NPVW 91 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS--SSCE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc--CccE
Confidence 4689999999999999999998753 56799999865432 24678999999999999999999999853 3458
Q ss_pred EEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccC
Q 047739 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTI 955 (1099)
Q Consensus 876 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 955 (1099)
+||||+++|+|.+++... ...+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++...
T Consensus 92 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167 (281)
T ss_dssp EEEECCTTEEHHHHHHHT----TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred EEEecCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccC
Confidence 999999999999999753 2358999999999999999999999999999999999999999999999999998652
Q ss_pred CCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhccccccccC
Q 047739 956 PTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLEP 1034 (1099)
Q Consensus 956 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1034 (1099)
.. .........+|+.|+|||.+.+..++.++||||+|+++|||++ |..||......+....+... .... ..+
T Consensus 168 ~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~----~~~~-~~~ 240 (281)
T 1mp8_A 168 DS--TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG----ERLP-MPP 240 (281)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT----CCCC-CCT
T ss_pred cc--cccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcC----CCCC-CCC
Confidence 21 1222334567889999999998899999999999999999997 99999877766655544321 1100 001
Q ss_pred cccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhccc
Q 047739 1035 GLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCR 1081 (1099)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 1081 (1099)
. .+ ..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 241 -------~-~~----~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 241 -------N-CP----PTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp -------T-CC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -------C-CC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0 11 12457899999999999999999999998764
No 98
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.4e-38 Score=358.47 Aligned_cols=271 Identities=24% Similarity=0.365 Sum_probs=207.5
Q ss_pred HhccccccccccccceeEEEEEE-----CCceEEEEEECCCCCc-cHHHHHHHHHHhhhccCCcceEEeeEEec-CCCce
Q 047739 802 TRQFDEENVLSRTRYGLVFKACY-----NDGMVLSIRRLPDGSL-DENLFRKEAEFLGKVRHRNLTVLRGYYAG-APDLR 874 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~ 874 (1099)
.++|+..+.||+|+||.||+|.+ .++..||+|++..... ..+.+.+|++++++++||||+++++++.. +....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 46899999999999999999985 3588999999865443 34668999999999999999999998864 34556
Q ss_pred EEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccccc
Q 047739 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLT 954 (1099)
Q Consensus 875 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~ 954 (1099)
++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++..
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 177 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 177 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred EEEEeecCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceec
Confidence 89999999999999998632 24899999999999999999999999999999999999999999999999999865
Q ss_pred CCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhH-----------HHHHHHHh
Q 047739 955 IPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDI-----------VKWVKKQL 1023 (1099)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~-----------~~~~~~~~ 1023 (1099)
..............||..|+|||++.+..++.++||||+|+++|||++|+.||.....+.. ...+....
T Consensus 178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (327)
T 3lxl_A 178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL 257 (327)
T ss_dssp CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHH
T ss_pred ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHh
Confidence 3322222334456788999999999988899999999999999999999999864332211 01111111
Q ss_pred hhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCCCCCCC
Q 047739 1024 QKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPDIPSS 1089 (1099)
Q Consensus 1024 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~ 1089 (1099)
..+... ..+.... ..+.+++.+||+.||++|||+.|+++.|+.+.........
T Consensus 258 ~~~~~~---------~~~~~~~----~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~ 310 (327)
T 3lxl_A 258 EEGQRL---------PAPPACP----AEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCET 310 (327)
T ss_dssp HTTCCC---------CCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---------
T ss_pred hcccCC---------CCCCccc----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCccc
Confidence 111100 0001111 1245889999999999999999999999988765544333
No 99
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=350.63 Aligned_cols=252 Identities=19% Similarity=0.282 Sum_probs=204.5
Q ss_pred HHhccccccccccccceeEEEEEEC-CceEEEEEECCCCC-------ccHHHHHHHHHHhhhccCCcceEEeeEEecCCC
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS-------LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPD 872 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 872 (1099)
..++|...+.||+|+||.||+|... +|..||+|.+.... ...+.+.+|++++++++||||+++++++.. ..
T Consensus 9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~ 87 (326)
T 2y0a_A 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN-KT 87 (326)
T ss_dssp HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SS
T ss_pred cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CC
Confidence 3467999999999999999999986 58899999885422 135779999999999999999999999985 45
Q ss_pred ceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCC----cEEEecc
Q 047739 873 LRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADF----EAHLSDF 948 (1099)
Q Consensus 873 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~----~~kl~Df 948 (1099)
..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+.+|+||||||+||+++.++ .+||+||
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 88 DVILILELVAGGELFDFLAEK-----ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp EEEEEEECCCSCBHHHHHTTS-----SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEEEEcCCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 569999999999999999742 3489999999999999999999999999999999999999887 7999999
Q ss_pred ccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccc
Q 047739 949 GLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQI 1028 (1099)
Q Consensus 949 Gla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 1028 (1099)
|+++.... ........||+.|+|||++.+..++.++||||+||++|||++|+.||......+....+..... ..
T Consensus 163 g~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~--~~ 236 (326)
T 2y0a_A 163 GLAHKIDF----GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY--EF 236 (326)
T ss_dssp TTCEECCT----TSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCC--CC
T ss_pred CCCeECCC----CCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCC--Cc
Confidence 99986522 1223456799999999999988999999999999999999999999987665554444332110 00
Q ss_pred cccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1029 TELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1029 ~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
.....+.. -..+.+++.+||+.||++|||+.|+++.
T Consensus 237 ~~~~~~~~------------~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 237 EDEYFSNT------------SALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp CHHHHTTS------------CHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CccccccC------------CHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00000000 0134578999999999999999999874
No 100
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.6e-37 Score=344.84 Aligned_cols=263 Identities=22% Similarity=0.329 Sum_probs=201.0
Q ss_pred hccccccccccccceeEEEEEECCceEEEEEECCCCCcc---HHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEe
Q 047739 803 RQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLD---ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYD 879 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e 879 (1099)
++|+..+.||+|+||.||+|...+|+.||+|++.....+ .+.+.+|++++++++||||+++++++... ...++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~lv~e 80 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTK-KRLVLVFE 80 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECS-SCEEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccC-CeEEEEEE
Confidence 478999999999999999999988999999998654433 36788999999999999999999999854 45699999
Q ss_pred ecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCCC
Q 047739 880 YMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTPA 959 (1099)
Q Consensus 880 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 959 (1099)
|+++ +|.+++... ...+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~~~-~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~--- 152 (288)
T 1ob3_A 81 HLDQ-DLKKLLDVC----EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGI--- 152 (288)
T ss_dssp CCSE-EHHHHHHTS----TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---
T ss_pred ecCC-CHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCc---
Confidence 9975 999988742 23488999999999999999999999999999999999999999999999999976421
Q ss_pred CCccccccccCccccCccccccC-CCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccc--------
Q 047739 960 EASTSTTAVGTLGYVSPEAALTG-ETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITE-------- 1030 (1099)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~-------- 1030 (1099)
.........||+.|+|||++.+. .++.++||||+||++|||++|+.||......+....+.+.........
T Consensus 153 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T 1ob3_A 153 PVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP 232 (288)
T ss_dssp ---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred cccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccc
Confidence 11223445789999999998764 589999999999999999999999987766655555544332211100
Q ss_pred cccCcccCCCCCChhHH-----HHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1031 LLEPGLLELDPESSEWE-----EFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1031 ~~d~~~~~~~~~~~~~~-----~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
..++.+....+. .++ .-..+.+++.+||+.||++|||++|+++.
T Consensus 233 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 233 KYDPNFTVYEPL--PWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp TCCTTCCCCCCC--CGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccccCc--cHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 011111100000 000 00234589999999999999999999863
No 101
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.3e-37 Score=345.52 Aligned_cols=252 Identities=25% Similarity=0.443 Sum_probs=200.3
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCccH--------HHHHHHHHHhhhccCCcceEEeeEEecCCC
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDE--------NLFRKEAEFLGKVRHRNLTVLRGYYAGAPD 872 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~--------~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 872 (1099)
.++|+..+.||+|+||.||+|.+. +++.||+|.+....... +.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 357999999999999999999985 68999999985433221 67899999999999999999999986432
Q ss_pred ceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCC--ceecCCCCCCEEECCCCc-----EEE
Q 047739 873 LRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSN--MVHGDIKPQNVLFDADFE-----AHL 945 (1099)
Q Consensus 873 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~--iiH~Dlk~~NIll~~~~~-----~kl 945 (1099)
++||||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||
T Consensus 97 --~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 97 --RMVMEFVPCGDLYHRLLDK----AHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp --EEEEECCTTCBHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred --eEEEEecCCCCHHHHHhcc----cCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEe
Confidence 7999999999999988642 345899999999999999999999999 999999999999988776 999
Q ss_pred eccccccccCCCCCCCccccccccCccccCccccc--cCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHh
Q 047739 946 SDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAAL--TGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQL 1023 (1099)
Q Consensus 946 ~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~ 1023 (1099)
+|||+++... .......||+.|+|||++. ...++.++||||+|+++|||++|+.||........... ...
T Consensus 171 ~Dfg~~~~~~------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~-~~~- 242 (287)
T 4f0f_A 171 ADFGLSQQSV------HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI-NMI- 242 (287)
T ss_dssp CCCTTCBCCS------SCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHH-HHH-
T ss_pred CCCCcccccc------ccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHH-HHH-
Confidence 9999997431 2234567999999999984 45578999999999999999999999976554433211 111
Q ss_pred hhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcc
Q 047739 1024 QKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGC 1080 (1099)
Q Consensus 1024 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~ 1080 (1099)
............ .+ ..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 243 ~~~~~~~~~~~~--------~~----~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 243 REEGLRPTIPED--------CP----PRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHSCCCCCCCTT--------SC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred hccCCCCCCCcc--------cC----HHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 111111111111 11 1345899999999999999999999999864
No 102
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=7.5e-38 Score=352.14 Aligned_cols=262 Identities=24% Similarity=0.331 Sum_probs=208.5
Q ss_pred HhccccccccccccceeEEEEEE------CCceEEEEEECCCCCc--cHHHHHHHHHHhhhc-cCCcceEEeeEEecCCC
Q 047739 802 TRQFDEENVLSRTRYGLVFKACY------NDGMVLSIRRLPDGSL--DENLFRKEAEFLGKV-RHRNLTVLRGYYAGAPD 872 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 872 (1099)
.++|+..+.||+|+||.||+|.+ .++..||+|.+..... ..+.+.+|+++++++ +||||+++++++....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~- 100 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG- 100 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC-
Confidence 46899999999999999999985 3478999999965432 346789999999999 9999999999998544
Q ss_pred ceEEEEeecCCCCHHHHHhhhcc-------------CCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECC
Q 047739 873 LRLLVYDYMPNGNLGTLLQEASH-------------QDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDA 939 (1099)
Q Consensus 873 ~~~lV~e~~~~gsL~~~l~~~~~-------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~ 939 (1099)
..++||||+++|+|.+++..... .....+++..++.++.|+++||+|||+.||+||||||+||+++.
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~ 180 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH 180 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEET
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcC
Confidence 45999999999999999986432 11235899999999999999999999999999999999999999
Q ss_pred CCcEEEeccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHH
Q 047739 940 DFEAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKW 1018 (1099)
Q Consensus 940 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~ 1018 (1099)
++.+||+|||+++...... .........+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||...........
T Consensus 181 ~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~ 259 (313)
T 1t46_A 181 GRITKICDFGLARDIKNDS-NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK 259 (313)
T ss_dssp TTEEEECCCGGGSCTTSCT-TSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHH
T ss_pred CCCEEEccccccccccccc-cceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHH
Confidence 9999999999998653221 1222344567889999999999999999999999999999999 9999976654433322
Q ss_pred HHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhccc
Q 047739 1019 VKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCR 1081 (1099)
Q Consensus 1019 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 1081 (1099)
........ ... ...+ ..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 260 ~~~~~~~~----~~~--------~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 260 MIKEGFRM----LSP--------EHAP----AEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp HHHHTCCC----CCC--------TTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhccCCCC----CCc--------ccCC----HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 22211110 000 0011 13457899999999999999999999998764
No 103
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=6e-38 Score=350.26 Aligned_cols=249 Identities=20% Similarity=0.297 Sum_probs=195.2
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCc---------------------------cHHHHHHHHHHhh
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL---------------------------DENLFRKEAEFLG 853 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---------------------------~~~~~~~E~~~l~ 853 (1099)
.++|++.+.||+|+||.||+|... +++.||+|.+..... ..+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 357999999999999999999875 589999999854321 1256889999999
Q ss_pred hccCCcceEEeeEEecC-CCceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCC
Q 047739 854 KVRHRNLTVLRGYYAGA-PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKP 932 (1099)
Q Consensus 854 ~l~H~niv~l~~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~ 932 (1099)
+++||||+++++++.+. ....++||||+++|+|.+++.. ..+++..+..++.|+++||+|||+.+|+||||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp 165 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL------KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKP 165 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCH
Confidence 99999999999999753 4567899999999999876532 3589999999999999999999999999999999
Q ss_pred CCEEECCCCcEEEeccccccccCCCCCCCccccccccCccccCccccccCC---CCCcCchhhHHHHHHHHHhCCCCCCC
Q 047739 933 QNVLFDADFEAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGE---TTKESDVYSFGIVLLELLTGKRPVMF 1009 (1099)
Q Consensus 933 ~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DV~S~G~il~elltg~~P~~~ 1009 (1099)
+||+++.++.+||+|||+++..... ........||+.|+|||++.+.. ++.++||||+|+++|||++|+.||..
T Consensus 166 ~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 242 (298)
T 2zv2_A 166 SNLLVGEDGHIKIADFGVSNEFKGS---DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242 (298)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSS---SCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred HHEEECCCCCEEEecCCCccccccc---cccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 9999999999999999999865321 22334568999999999987655 37789999999999999999999976
Q ss_pred CCchhHHHHHHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1010 TQDEDIVKWVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1010 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
.........+.. ........+ . .. ..+.+++.+||+.||++||++.|+++
T Consensus 243 ~~~~~~~~~~~~----~~~~~~~~~-------~-~~----~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 243 ERIMCLHSKIKS----QALEFPDQP-------D-IA----EDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp SSHHHHHHHHHH----CCCCCCSSS-------C-CC----HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccHHHHHHHHhc----ccCCCCCcc-------c-cC----HHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 654443333222 111000000 0 01 12457899999999999999999875
No 104
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=363.69 Aligned_cols=254 Identities=19% Similarity=0.245 Sum_probs=205.6
Q ss_pred HHHhccccccccccccceeEEEEEEC-CceEEEEEECCCCCc---cHHHHHHHHHHhhhccCCcceEEeeEEecCCCceE
Q 047739 800 EATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL---DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875 (1099)
Q Consensus 800 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 875 (1099)
...++|++.+.||+|+||.||+|... +|..||+|.+..... +.+.+.+|++++++++||||+++++++.+ +...|
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~~ 86 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE-EGHHY 86 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEEC-SSEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEE-CCEEE
Confidence 34678999999999999999999875 689999999865443 23568899999999999999999999984 45669
Q ss_pred EEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEEC---CCCcEEEecccccc
Q 047739 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFD---ADFEAHLSDFGLDR 952 (1099)
Q Consensus 876 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~---~~~~~kl~DfGla~ 952 (1099)
+||||+++|+|.+++... ..+++.....++.||++||+|||+.||+||||||+||+++ .++.+||+|||+|+
T Consensus 87 lv~E~~~gg~L~~~i~~~-----~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 87 LIFDLVTGGELFEDIVAR-----EYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp EEECCCBCCBHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEEEeCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 999999999999999753 3489999999999999999999999999999999999998 46789999999997
Q ss_pred ccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccc
Q 047739 953 LTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELL 1032 (1099)
Q Consensus 953 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1099)
.... .........||+.|+|||++.+..++.++||||+||++|||++|+.||......+....+...... ..
T Consensus 162 ~~~~---~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~-----~~ 233 (444)
T 3soa_A 162 EVEG---EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD-----FP 233 (444)
T ss_dssp CCCT---TCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC-----CC
T ss_pred EecC---CCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCC-----CC
Confidence 6522 222334568999999999999989999999999999999999999999877766655554432111 11
Q ss_pred cCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1033 EPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1033 d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
.+.+... . ..+.+++.+||+.||++|||+.|+++.
T Consensus 234 ~~~~~~~-----s----~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 234 SPEWDTV-----T----PEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp TTTTTTS-----C----HHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ccccccC-----C----HHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1111111 1 124578999999999999999999874
No 105
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3.9e-38 Score=352.36 Aligned_cols=263 Identities=23% Similarity=0.307 Sum_probs=200.8
Q ss_pred HhccccccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhh--ccCCcceEEeeEEecC---CCceEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGK--VRHRNLTVLRGYYAGA---PDLRLL 876 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~---~~~~~l 876 (1099)
.++|+..+.||+|+||.||+|.+ +++.||+|++... ..+.+.+|.+++.. ++||||+++++++... ....++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR--DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc--cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 56899999999999999999998 5889999998643 44566777777776 7999999999987532 334689
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHc--------cCCceecCCCCCCEEECCCCcEEEecc
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLH--------TSNMVHGDIKPQNVLFDADFEAHLSDF 948 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~iiH~Dlk~~NIll~~~~~~kl~Df 948 (1099)
||||+++|+|.++++. ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 84 v~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp EECCCTTCBHHHHHTT------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCC
T ss_pred ehhhccCCCHHHHHhh------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeC
Confidence 9999999999999963 34899999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCCCC-CccccccccCccccCccccccC------CCCCcCchhhHHHHHHHHHhC----------CCCCCCCC
Q 047739 949 GLDRLTIPTPAE-ASTSTTAVGTLGYVSPEAALTG------ETTKESDVYSFGIVLLELLTG----------KRPVMFTQ 1011 (1099)
Q Consensus 949 Gla~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DV~S~G~il~elltg----------~~P~~~~~ 1011 (1099)
|+|+........ ........||+.|+|||++.+. .++.++||||||+++|||++| +.||....
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 999764322111 1123345899999999999876 455799999999999999999 88886432
Q ss_pred ch-hHHHHHHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcc
Q 047739 1012 DE-DIVKWVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGC 1080 (1099)
Q Consensus 1012 ~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~ 1080 (1099)
.. .....+.............. ...........+.+++.+||+.||++|||+.||++.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 238 PNDPSFEDMRKVVCVDQQRPNIP-------NRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCC-------GGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCcchhhhhHHHhccCCCCCCC-------hhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 21 11222222222111111111 1111112234456899999999999999999999999875
No 106
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=7.2e-38 Score=352.48 Aligned_cols=261 Identities=23% Similarity=0.327 Sum_probs=210.4
Q ss_pred HhccccccccccccceeEEEEEE------CCceEEEEEECCCCCc--cHHHHHHHHHHhhhccCCcceEEeeEEecCCCc
Q 047739 802 TRQFDEENVLSRTRYGLVFKACY------NDGMVLSIRRLPDGSL--DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 873 (1099)
.++|.+.+.||+|+||.||+|.. .++..||+|.+..... ..+.+.+|++++++++||||+++++++... ..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~ 100 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD-GP 100 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-SS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC-Cc
Confidence 56899999999999999999986 3458999999975432 236788999999999999999999999854 44
Q ss_pred eEEEEeecCCCCHHHHHhhhccC-------------------CCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCC
Q 047739 874 RLLVYDYMPNGNLGTLLQEASHQ-------------------DGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQN 934 (1099)
Q Consensus 874 ~~lV~e~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~N 934 (1099)
.++||||+++|+|.+++...... ....+++..++.++.|+++||+|||+.+|+||||||+|
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~N 180 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARN 180 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchhe
Confidence 69999999999999999864321 12458999999999999999999999999999999999
Q ss_pred EEECCCCcEEEeccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCch
Q 047739 935 VLFDADFEAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDE 1013 (1099)
Q Consensus 935 Ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~ 1013 (1099)
|+++.++.+||+|||+++..... ..........+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||......
T Consensus 181 Ili~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~ 259 (314)
T 2ivs_A 181 ILVAEGRKMKISDFGLSRDVYEE-DSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE 259 (314)
T ss_dssp EEEETTTEEEECCCTTCEECTTT-SCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred EEEcCCCCEEEcccccccccccc-ccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 99999999999999999865322 11222344567889999999998889999999999999999999 99999877766
Q ss_pred hHHHHHHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhccc
Q 047739 1014 DIVKWVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCR 1081 (1099)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 1081 (1099)
.....+..... ... . .... ..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 260 ~~~~~~~~~~~----~~~-~--------~~~~----~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 310 (314)
T 2ivs_A 260 RLFNLLKTGHR----MER-P--------DNCS----EEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310 (314)
T ss_dssp GHHHHHHTTCC----CCC-C--------TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHhhcCCc----CCC-C--------ccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 65544332211 000 0 0011 13457899999999999999999999998764
No 107
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=5.7e-38 Score=348.58 Aligned_cols=258 Identities=21% Similarity=0.372 Sum_probs=214.7
Q ss_pred HHhccccccccccccceeEEEEEECC-ceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEe
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYD 879 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e 879 (1099)
..++|+..+.||+|+||.||+|.+.. +..||+|.+.......+.+.+|++++++++||||+++++++.+. ...++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-PPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-SSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC-CCEEEEEE
Confidence 45689999999999999999999875 88999999987777778899999999999999999999999854 45699999
Q ss_pred ecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCCC
Q 047739 880 YMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTPA 959 (1099)
Q Consensus 880 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 959 (1099)
|+++|+|.+++... ....+++..+..++.|++.||+|||+.+|+||||||+||+++.++.+||+|||+++.... .
T Consensus 90 ~~~~~~L~~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~--~ 164 (288)
T 3kfa_A 90 FMTYGNLLDYLREC---NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--D 164 (288)
T ss_dssp CCTTEEHHHHHHHC---CTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCS--S
T ss_pred cCCCCcHHHHHHhc---ccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccC--C
Confidence 99999999999753 234589999999999999999999999999999999999999999999999999986522 2
Q ss_pred CCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhccccccccCcccC
Q 047739 960 EASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLE 1038 (1099)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 1038 (1099)
.........+|+.|+|||.+.+..++.++||||+|+++|||++ |..||...........+....... ..
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~-----~~----- 234 (288)
T 3kfa_A 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME-----RP----- 234 (288)
T ss_dssp SSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCC-----CC-----
T ss_pred ccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCC-----CC-----
Confidence 2233445567889999999999999999999999999999999 999998776665555443321100 00
Q ss_pred CCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhccc
Q 047739 1039 LDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCR 1081 (1099)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 1081 (1099)
...+ ..+.+++.+|++.||++|||+.|+++.|+.+.
T Consensus 235 ---~~~~----~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~ 270 (288)
T 3kfa_A 235 ---EGCP----EKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270 (288)
T ss_dssp ---TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CCCC----HHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence 0011 13457899999999999999999999998754
No 108
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.1e-37 Score=356.91 Aligned_cols=253 Identities=19% Similarity=0.298 Sum_probs=204.9
Q ss_pred HHHhccccccccccccceeEEEEEEC-CceEEEEEECCCCCcc---HHHHHHHHHHhhhccCCcceEEeeEEecCCCceE
Q 047739 800 EATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLD---ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875 (1099)
Q Consensus 800 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 875 (1099)
...++|++.+.||+|+||.||+|..+ +|..||+|.+...... .+.+.+|++++++++||||+++++++.+ ....|
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-~~~~~ 104 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-ESFHY 104 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEE
Confidence 34678999999999999999999986 5899999998654332 3568899999999999999999999985 45569
Q ss_pred EEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCC---CcEEEecccccc
Q 047739 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDAD---FEAHLSDFGLDR 952 (1099)
Q Consensus 876 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~---~~~kl~DfGla~ 952 (1099)
+||||+++|+|.+++... ..+++..+..++.||++||+|||+.||+||||||+||+++.+ +.+||+|||+++
T Consensus 105 lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~ 179 (362)
T 2bdw_A 105 LVFDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179 (362)
T ss_dssp EEECCCCSCBHHHHHTTC-----SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred EEEecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence 999999999999998742 348999999999999999999999999999999999999865 459999999998
Q ss_pred ccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccc
Q 047739 953 LTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELL 1032 (1099)
Q Consensus 953 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1099)
.... ........||+.|+|||++.+..++.++||||+||++|||++|+.||...........+... ... ..
T Consensus 180 ~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~----~~~-~~ 250 (362)
T 2bdw_A 180 EVND----SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG----AYD-YP 250 (362)
T ss_dssp CCTT----CCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT----CCC-CC
T ss_pred EecC----CcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC----CCC-CC
Confidence 6532 22234568999999999999989999999999999999999999999877665555444332 110 01
Q ss_pred cCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1033 EPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1033 d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
.+.+... . ..+.+++.+||+.||++||++.|+++.
T Consensus 251 ~~~~~~~-----~----~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 251 SPEWDTV-----T----PEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp TTGGGGS-----C----HHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccccCC-----C----HHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1111100 0 124579999999999999999998864
No 109
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5e-38 Score=348.85 Aligned_cols=269 Identities=19% Similarity=0.290 Sum_probs=215.3
Q ss_pred hcccccc-ccccccceeEEEEEEC---CceEEEEEECCCCC--ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEE
Q 047739 803 RQFDEEN-VLSRTRYGLVFKACYN---DGMVLSIRRLPDGS--LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLL 876 (1099)
Q Consensus 803 ~~~~~~~-~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 876 (1099)
++|.+.+ .||+|+||.||+|.+. ++..||+|.+.... ...+.+.+|++++++++||||+++++++.. +..++
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~l 86 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA--EALML 86 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES--SSEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecC--CCcEE
Confidence 4566665 9999999999999864 57889999997643 234678999999999999999999999953 34699
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCC
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIP 956 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 956 (1099)
||||+++|+|.+++... ...+++..+..++.|+++||+|||+.+|+||||||+||+++.++.+||+|||+++....
T Consensus 87 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~ 162 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGA 162 (287)
T ss_dssp EEECCTTEEHHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred EEEeCCCCCHHHHHHhC----CccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeecc
Confidence 99999999999999642 34589999999999999999999999999999999999999999999999999986533
Q ss_pred CCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhccccccccCc
Q 047739 957 TPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLEPG 1035 (1099)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1035 (1099)
............+|+.|+|||++.+..++.++||||+|+++|||++ |+.||......+....+... .... ..+
T Consensus 163 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~----~~~~-~~~- 236 (287)
T 1u59_A 163 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG----KRME-CPP- 236 (287)
T ss_dssp CSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTT----CCCC-CCT-
T ss_pred CcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcC----CcCC-CCC-
Confidence 2222223344567899999999988889999999999999999999 99999876665554443321 1110 011
Q ss_pred ccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCCCCCCCCCCCC
Q 047739 1036 LLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPDIPSSADPTT 1094 (1099)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~ 1094 (1099)
..+ ..+.+++.+||+.||++||++.|+++.|+.+......+.+..+..
T Consensus 237 -------~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~~~~~~~ 284 (287)
T 1u59_A 237 -------ECP----PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGHHHH 284 (287)
T ss_dssp -------TCC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTCSSCCCT
T ss_pred -------CcC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcccCCccc
Confidence 011 134578999999999999999999999999877666666655443
No 110
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=4.7e-38 Score=354.68 Aligned_cols=253 Identities=23% Similarity=0.275 Sum_probs=199.0
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCc--cHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL--DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVY 878 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 878 (1099)
.++|++.+.||+|+||.||+|.+. +++.||+|.+..... ..+.+.+|+.++++++||||+++++++.+ +...++||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~lv~ 84 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-GNIQYLFL 84 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEec-CCeEEEEE
Confidence 468999999999999999999986 689999999854322 23678999999999999999999999984 45669999
Q ss_pred eecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCC
Q 047739 879 DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTP 958 (1099)
Q Consensus 879 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 958 (1099)
||+++|+|.+++... ..+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++.....
T Consensus 85 e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 158 (323)
T 3tki_A 85 EYCSGGELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN- 158 (323)
T ss_dssp ECCTTEEGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEET-
T ss_pred EcCCCCcHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccC-
Confidence 999999999998642 34899999999999999999999999999999999999999999999999999754221
Q ss_pred CCCccccccccCccccCccccccCCC-CCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCccc
Q 047739 959 AEASTSTTAVGTLGYVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLL 1037 (1099)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1037 (1099)
..........||+.|+|||++.+..+ +.++||||+||++|||++|+.||.............. ..... .. .+.
T Consensus 159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~--~~~~~---~~-~~~ 232 (323)
T 3tki_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK--EKKTY---LN-PWK 232 (323)
T ss_dssp TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHH--TTCTT---ST-TGG
T ss_pred CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh--ccccc---CC-ccc
Confidence 12223345689999999999987775 7789999999999999999999976554322111111 11100 00 000
Q ss_pred CCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1038 ELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
.. . ..+.+++.+||+.||++|||+.|+++.
T Consensus 233 ~~-----~----~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 233 KI-----D----SAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp GS-----C----HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cC-----C----HHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00 0 123578999999999999999999874
No 111
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=5e-38 Score=356.22 Aligned_cols=261 Identities=15% Similarity=0.210 Sum_probs=207.5
Q ss_pred HhccccccccccccceeEEEEEE-CCceEEEEEECCCCCccHHHHHHHHHHhhhc-cCCcceEEeeEEecCCCceEEEEe
Q 047739 802 TRQFDEENVLSRTRYGLVFKACY-NDGMVLSIRRLPDGSLDENLFRKEAEFLGKV-RHRNLTVLRGYYAGAPDLRLLVYD 879 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV~e 879 (1099)
.++|++.+.||+|+||.||+|.. .+|+.||+|.+.... ..+.+.+|+++++++ +||||+++++++.. +...++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPC-GKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEE-TTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEec-CCccEEEEE
Confidence 35799999999999999999997 468999999986433 335689999999999 99999999999885 455699999
Q ss_pred ecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCc-----EEEecccccccc
Q 047739 880 YMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFE-----AHLSDFGLDRLT 954 (1099)
Q Consensus 880 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~-----~kl~DfGla~~~ 954 (1099)
|+ +|+|.+++... ...+++..+..++.|++.||+|||+.||+||||||+||+++.++. +||+|||+++..
T Consensus 86 ~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~ 160 (330)
T 2izr_A 86 LL-GPSLEDLFDLC----DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160 (330)
T ss_dssp CC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred eC-CCCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence 99 89999999853 245899999999999999999999999999999999999998887 999999999865
Q ss_pred CCCCCCC----ccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhc--cc
Q 047739 955 IPTPAEA----STSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKG--QI 1028 (1099)
Q Consensus 955 ~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~--~~ 1028 (1099)
....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+....... ..
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 240 (330)
T 2izr_A 161 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATP 240 (330)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSC
T ss_pred ecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCC
Confidence 3222111 12346789999999999999999999999999999999999999998755444333322211110 00
Q ss_pred cccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccC
Q 047739 1029 TELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRV 1082 (1099)
Q Consensus 1029 ~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 1082 (1099)
.+.... . .+ .+.+++..||+.||.+||++.+|.+.|+++..
T Consensus 241 ~~~~~~--------~--~p---~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~ 281 (330)
T 2izr_A 241 IEVLCE--------N--FP---EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFD 281 (330)
T ss_dssp HHHHTT--------T--CH---HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHhc--------c--Ch---HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence 000000 0 01 34688999999999999999999999986653
No 112
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.9e-38 Score=365.88 Aligned_cols=254 Identities=20% Similarity=0.278 Sum_probs=205.9
Q ss_pred HHHhccccccccccccceeEEEEEEC-CceEEEEEECCCC----CccHHHHHHHHHHhhhccCCcceEEeeEEecCCCce
Q 047739 800 EATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDG----SLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR 874 (1099)
Q Consensus 800 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 874 (1099)
...++|+..++||+|+||.||+|+.+ +++.||+|++... ....+.+.+|+++++.++||||+++++++.+ +...
T Consensus 66 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~-~~~~ 144 (410)
T 3v8s_A 66 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD-DRYL 144 (410)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC-SSEE
T ss_pred cCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE-CCEE
Confidence 34678999999999999999999986 4889999998532 1223458899999999999999999999985 5567
Q ss_pred EEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccccc
Q 047739 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLT 954 (1099)
Q Consensus 875 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~ 954 (1099)
|+||||+++|+|.++++.. .+++.....++.||+.||+|||+.||+||||||+||+++.++.+||+|||+|+..
T Consensus 145 ~lV~E~~~gg~L~~~l~~~------~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~ 218 (410)
T 3v8s_A 145 YMVMEYMPGGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 218 (410)
T ss_dssp EEEECCCTTEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEeCCCCCcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEee
Confidence 9999999999999999742 3789999999999999999999999999999999999999999999999999765
Q ss_pred CCCCCCCccccccccCccccCccccccCC----CCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccc
Q 047739 955 IPTPAEASTSTTAVGTLGYVSPEAALTGE----TTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITE 1030 (1099)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1099)
.. .........+||+.|+|||++.+.. ++.++||||+||++|||++|+.||...+..+....+.........+.
T Consensus 219 ~~--~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~ 296 (410)
T 3v8s_A 219 NK--EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD 296 (410)
T ss_dssp CT--TSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCT
T ss_pred cc--CCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCC
Confidence 21 1222344678999999999998665 78999999999999999999999987776666655544322111110
Q ss_pred cccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCC--CCCHHHHHHH
Q 047739 1031 LLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPID--RPTMSDIVFM 1076 (1099)
Q Consensus 1031 ~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~--RPs~~evl~~ 1076 (1099)
+..+ . ..+.+++.+|++.+|++ ||+++||++.
T Consensus 297 --~~~~------s------~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 297 --DNDI------S------KEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp --TCCC------C------HHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred --cccc------c------HHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 0001 1 12457899999999988 9999999974
No 113
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3.7e-38 Score=358.90 Aligned_cols=248 Identities=23% Similarity=0.329 Sum_probs=198.9
Q ss_pred HHhccccccccccccceeEEEEEEC-CceEEEEEECCCCC----ccHHHHHHHHHHhhhc-cCCcceEEeeEEecCCCce
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS----LDENLFRKEAEFLGKV-RHRNLTVLRGYYAGAPDLR 874 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 874 (1099)
..++|++.++||+|+||.||+|+.+ +|+.||+|++.... ...+.+.+|.++++++ +||||+++++++.+ ....
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~-~~~~ 99 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQT-PDRL 99 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEe-CCEE
Confidence 3568999999999999999999986 48999999985421 2345678899999988 69999999999985 4557
Q ss_pred EEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccccc
Q 047739 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLT 954 (1099)
Q Consensus 875 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~ 954 (1099)
|+||||+++|+|.+++.+. ..+++..+..++.||+.||+|||+.||+||||||+||+++.++.+||+|||+|+..
T Consensus 100 ~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKS-----RRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeec
Confidence 9999999999999999864 34899999999999999999999999999999999999999999999999999853
Q ss_pred CCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccC
Q 047739 955 IPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEP 1034 (1099)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1034 (1099)
. .........+||+.|+|||++.+..++.++||||+||++|||++|+.||......+....+... ... +..
T Consensus 175 ~---~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~----~~~--~p~ 245 (353)
T 3txo_A 175 I---CNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND----EVV--YPT 245 (353)
T ss_dssp C---C---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC----CCC--CCT
T ss_pred c---cCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcC----CCC--CCC
Confidence 2 1223345678999999999999888999999999999999999999999887766665554432 110 000
Q ss_pred cccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCH------HHHHH
Q 047739 1035 GLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTM------SDIVF 1075 (1099)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~------~evl~ 1075 (1099)
.+ . ..+.+++.+|++.||++||++ .||++
T Consensus 246 ~~--------~----~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 246 WL--------H----EDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp TS--------C----HHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CC--------C----HHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 00 0 124578999999999999998 67764
No 114
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.7e-36 Score=360.48 Aligned_cols=350 Identities=25% Similarity=0.389 Sum_probs=297.8
Q ss_pred CCCCccEEEcccccCCCccCcccccccCCCCCcceEEEeccccccccCCCCCCCCCCceeEEEcCCCccccCcchhccCC
Q 047739 238 ALPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRA 317 (1099)
Q Consensus 238 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l 317 (1099)
.+++|+.|++++|.+.. +|. ...+++|++|+|++|++++..+ +..+
T Consensus 44 ~l~~l~~L~l~~~~i~~-l~~-------------------------------~~~l~~L~~L~Ls~n~l~~~~~--~~~l 89 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIKS-IDG-------------------------------VEYLNNLTQINFSNNQLTDITP--LKNL 89 (466)
T ss_dssp HHHTCCEEECCSSCCCC-CTT-------------------------------GGGCTTCCEEECCSSCCCCCGG--GTTC
T ss_pred HhccccEEecCCCCCcc-Ccc-------------------------------hhhhcCCCEEECCCCccCCchh--hhcc
Confidence 35678888888887762 332 1235679999999999997655 8999
Q ss_pred CCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeec
Q 047739 318 STLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTL 397 (1099)
Q Consensus 318 ~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 397 (1099)
++|++|++++|.+++..+ ++++++|++|++++|.+++..+ +.++++|++|+|++|++++ ++ .+..+++|++|++
T Consensus 90 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l 163 (466)
T 1o6v_A 90 TKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSF 163 (466)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEE
T ss_pred ccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeec
Confidence 999999999999986554 9999999999999999986533 8899999999999999985 44 4889999999999
Q ss_pred cCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCCCc
Q 047739 398 AANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGR 477 (1099)
Q Consensus 398 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 477 (1099)
+ |.+.+.. .+.++++|++|++++|.+++. ..+..+++|++|++++|.+++..+ ++.+++|+.|++++|++++.
T Consensus 164 ~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 236 (466)
T 1o6v_A 164 G-NQVTDLK--PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI 236 (466)
T ss_dssp E-ESCCCCG--GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred C-CcccCch--hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc
Confidence 6 5555443 389999999999999999854 458899999999999999987665 77899999999999999853
Q ss_pred CCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhcccccceecccccccCCCCCCccccc
Q 047739 478 IPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATFSFL 557 (1099)
Q Consensus 478 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l 557 (1099)
..+..+++|++|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|++++..+ +..+
T Consensus 237 --~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l 308 (466)
T 1o6v_A 237 --GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNL 308 (466)
T ss_dssp --GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGC
T ss_pred --hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCC
Confidence 468889999999999999986655 8899999999999999996544 8899999999999999987655 8899
Q ss_pred ceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccCcccEEeccCccccccCCcccCCCCCCCEEEC
Q 047739 558 RSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSLRSLLV 637 (1099)
Q Consensus 558 ~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 637 (1099)
++|+.|++++|++++..| +..+++|++|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++
T Consensus 309 ~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l 382 (466)
T 1o6v_A 309 KNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGL 382 (466)
T ss_dssp TTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEEC
T ss_pred CCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEec
Confidence 999999999999997765 78999999999999999964 578999999999999999998766 899999999999
Q ss_pred cCccccccCChh
Q 047739 638 NSNHLSGGIPDS 649 (1099)
Q Consensus 638 s~N~l~~~~p~~ 649 (1099)
++|++++ +|..
T Consensus 383 ~~n~~~~-~p~~ 393 (466)
T 1o6v_A 383 NDQAWTN-APVN 393 (466)
T ss_dssp CCEEEEC-CCBC
T ss_pred cCCcccC-Cchh
Confidence 9999995 4433
No 115
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.1e-38 Score=354.27 Aligned_cols=262 Identities=26% Similarity=0.443 Sum_probs=202.0
Q ss_pred HhccccccccccccceeEEEEEECC-----ceEEEEEECCCCCc--cHHHHHHHHHHhhhccCCcceEEeeEEecCCCce
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYND-----GMVLSIRRLPDGSL--DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR 874 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 874 (1099)
..+|...+.||+|+||.||+|.+.. +..||+|.+..... ....+.+|++++++++||||+++++++.. ....
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~ 121 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK-YKPM 121 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec-CCCc
Confidence 3467788999999999999998653 35699999865432 34568899999999999999999999985 4556
Q ss_pred EEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccccc
Q 047739 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLT 954 (1099)
Q Consensus 875 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~ 954 (1099)
++||||+++|+|.+++... ...+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++..
T Consensus 122 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 122 MIITEYMENGALDKFLREK----DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp EEEEECCTTEEHHHHHHHT----TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred EEEEeCCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 9999999999999999752 245899999999999999999999999999999999999999999999999999865
Q ss_pred CCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhcccccccc
Q 047739 955 IPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLE 1033 (1099)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 1033 (1099)
..............+|..|+|||.+.+..++.++||||||+++|||++ |+.||......+....+..... .. .
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~---~~--~- 271 (333)
T 1mqb_A 198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFR---LP--T- 271 (333)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC---CC--C-
T ss_pred ccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCc---CC--C-
Confidence 332222223334457889999999998999999999999999999999 9999987666554443332110 00 0
Q ss_pred CcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCCC
Q 047739 1034 PGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPD 1085 (1099)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 1085 (1099)
+.... ..+.+++.+||+.||++||++.|+++.|+++...++
T Consensus 272 -------~~~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 272 -------PMDCP----SAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp -------CTTCB----HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred -------cccCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 00111 124578999999999999999999999988765443
No 116
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=5e-38 Score=359.58 Aligned_cols=280 Identities=18% Similarity=0.216 Sum_probs=215.2
Q ss_pred hccccccccccccceeEEEEEECC---------ceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceE-----------
Q 047739 803 RQFDEENVLSRTRYGLVFKACYND---------GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTV----------- 862 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~~---------g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~----------- 862 (1099)
++|.+.+.||+|+||.||+|.... ++.||+|.+... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 117 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL 117 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCcc
Confidence 579999999999999999999864 789999998643 46889999999999999987
Q ss_pred ----EeeEEecCCCceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEEC
Q 047739 863 ----LRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFD 938 (1099)
Q Consensus 863 ----l~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~ 938 (1099)
+++++.......++||||+ +|+|.+++.... ...+++..+..++.||++||+|||+.||+||||||+||+++
T Consensus 118 ~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~ 193 (352)
T 2jii_A 118 AIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP---KHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVD 193 (352)
T ss_dssp SCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEE
T ss_pred CccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC---cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEc
Confidence 6677776567779999999 999999998531 24589999999999999999999999999999999999999
Q ss_pred CCC--cEEEeccccccccCCCCC----CCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCC-
Q 047739 939 ADF--EAHLSDFGLDRLTIPTPA----EASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQ- 1011 (1099)
Q Consensus 939 ~~~--~~kl~DfGla~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~- 1011 (1099)
.++ .+||+|||+++....... .........||+.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 194 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 273 (352)
T 2jii_A 194 PEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLP 273 (352)
T ss_dssp TTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred CCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Confidence 998 899999999986532211 1112244589999999999999999999999999999999999999997653
Q ss_pred chhHHHHHHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCCCCCCCCC
Q 047739 1012 DEDIVKWVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPDIPSSAD 1091 (1099)
Q Consensus 1012 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~ 1091 (1099)
............. .......+.... . ...+ ..+.+++.+||+.||++||++.||++.|+++..........+
T Consensus 274 ~~~~~~~~~~~~~-~~~~~~~~~~~~-~--~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~~~~ 345 (352)
T 2jii_A 274 NTEDIMKQKQKFV-DKPGPFVGPCGH-W--IRPS----ETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVSPYDP 345 (352)
T ss_dssp CHHHHHHHHHHHH-HSCCCEECTTSC-E--ECCC----HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCTTSC
T ss_pred CHHHHHHHHHhcc-CChhhhhhhccc-c--CCCc----HHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCCcCcc
Confidence 2222222222111 111111111000 0 0000 234578999999999999999999999999987777766666
Q ss_pred CCCCCCC
Q 047739 1092 PTTQPSP 1098 (1099)
Q Consensus 1092 ~~~~~~p 1098 (1099)
..|...|
T Consensus 346 ~dw~~~p 352 (352)
T 2jii_A 346 IGLPMVP 352 (352)
T ss_dssp CCCCC--
T ss_pred ccCcCCC
Confidence 6666554
No 117
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=5.9e-38 Score=355.83 Aligned_cols=247 Identities=24% Similarity=0.366 Sum_probs=203.2
Q ss_pred HHhccccccccccccceeEEEEEEC-CceEEEEEECCCC----CccHHHHHHHHHHhhhc-cCCcceEEeeEEecCCCce
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDG----SLDENLFRKEAEFLGKV-RHRNLTVLRGYYAGAPDLR 874 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 874 (1099)
..++|...++||+|+||.||+|+.+ +|+.||+|.+... ....+.+.+|.++++++ +||||+++++++.+ ....
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~-~~~~ 93 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT-KENL 93 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC-SSEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEe-CCEE
Confidence 4578999999999999999999986 5899999998543 22346678899999987 89999999999985 4557
Q ss_pred EEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccccc
Q 047739 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLT 954 (1099)
Q Consensus 875 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~ 954 (1099)
|+||||+++|+|.+++... ..+++..+..++.||+.||+|||+.||+||||||+||+++.++.+||+|||+++..
T Consensus 94 ~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 9999999999999999863 24899999999999999999999999999999999999999999999999999854
Q ss_pred CCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccC
Q 047739 955 IPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEP 1034 (1099)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1034 (1099)
.. ........+||+.|+|||++.+..++.++||||+||++|||++|+.||......+....+... .... ..
T Consensus 169 ~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~--~~~~----p~ 239 (345)
T 1xjd_A 169 ML---GDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD--NPFY----PR 239 (345)
T ss_dssp CC---TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCC----CT
T ss_pred cc---CCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhC--CCCC----Cc
Confidence 21 122345678999999999999999999999999999999999999999877666555544331 0100 11
Q ss_pred cccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHH-HHH
Q 047739 1035 GLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMS-DIV 1074 (1099)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~-evl 1074 (1099)
.+ . ..+.+++.+||+.||++||++. ||.
T Consensus 240 ~~--------s----~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 240 WL--------E----KEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp TS--------C----HHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred cc--------C----HHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 00 1 1245789999999999999997 664
No 118
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.2e-38 Score=356.45 Aligned_cols=266 Identities=22% Similarity=0.299 Sum_probs=207.0
Q ss_pred HHhccccccccccccceeEEEEEE------CCceEEEEEECCCCC--ccHHHHHHHHHHhhhc-cCCcceEEeeEEecCC
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACY------NDGMVLSIRRLPDGS--LDENLFRKEAEFLGKV-RHRNLTVLRGYYAGAP 871 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 871 (1099)
..++|+..+.||+|+||.||+|.+ .++..||+|.+.... ...+.+.+|+++++++ +||||+++++++...
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~- 121 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS- 121 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS-
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC-
Confidence 457899999999999999999986 246789999986432 2346799999999999 899999999999854
Q ss_pred CceEEEEeecCCCCHHHHHhhhccC------------------CCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCC
Q 047739 872 DLRLLVYDYMPNGNLGTLLQEASHQ------------------DGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933 (1099)
Q Consensus 872 ~~~~lV~e~~~~gsL~~~l~~~~~~------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~ 933 (1099)
+..++||||+++|+|.+++...... ....+++..++.++.||++||+|||+.||+||||||+
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~ 201 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAAR 201 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGG
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChh
Confidence 4569999999999999999764221 1134799999999999999999999999999999999
Q ss_pred CEEECCCCcEEEeccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCc
Q 047739 934 NVLFDADFEAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQD 1012 (1099)
Q Consensus 934 NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~ 1012 (1099)
||+++.++.+||+|||+++..... ..........||+.|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 202 NIll~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 280 (344)
T 1rjb_A 202 NVLVTHGKVVKICDFGLARDIMSD-SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV 280 (344)
T ss_dssp GEEEETTTEEEECCCGGGSCGGGC-TTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred hEEEcCCCcEEeCCCccCcccccC-ccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc
Confidence 999999999999999999865322 12223345568889999999999999999999999999999998 9999977654
Q ss_pred hhHHHHHHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCC
Q 047739 1013 EDIVKWVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGP 1084 (1099)
Q Consensus 1013 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 1084 (1099)
.......... +... ... ...+ ..+.+++.+||+.||.+|||+.|+++.|+.+....
T Consensus 281 ~~~~~~~~~~---~~~~-~~~--------~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 281 DANFYKLIQN---GFKM-DQP--------FYAT----EEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp SHHHHHHHHT---TCCC-CCC--------TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred HHHHHHHHhc---CCCC-CCC--------CCCC----HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 4333222221 1100 000 0011 12457899999999999999999999999876543
No 119
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.9e-37 Score=344.41 Aligned_cols=260 Identities=22% Similarity=0.354 Sum_probs=193.7
Q ss_pred HhccccccccccccceeEEEEEECCceEEEEEECCCCCcc---HHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLD---ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVY 878 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 878 (1099)
.++|++.++||+|+||.||+|.+.+ .||+|.+...... .+.+.+|++++++++||||+++++++.. ...++||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~lv~ 98 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA--PQLAIVT 98 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--SSCEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccC--CccEEEE
Confidence 4579999999999999999998764 4888888654332 3678999999999999999999997653 3458999
Q ss_pred eecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCC
Q 047739 879 DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTP 958 (1099)
Q Consensus 879 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 958 (1099)
||+++++|.+++... ...+++..+..++.|+++||+|||+.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 99 e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 173 (289)
T 3og7_A 99 QWCEGSSLYHHLHAS----ETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW- 173 (289)
T ss_dssp ECCCEEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC---------
T ss_pred EecCCCcHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceeccccccc-
Confidence 999999999999642 345899999999999999999999999999999999999999999999999999754221
Q ss_pred CCCccccccccCccccCccccc---cCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCc
Q 047739 959 AEASTSTTAVGTLGYVSPEAAL---TGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPG 1035 (1099)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1035 (1099)
..........||..|+|||.+. +..++.++||||+|+++|||++|+.||......+...... ..+.......
T Consensus 174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~-- 248 (289)
T 3og7_A 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV---GRGSLSPDLS-- 248 (289)
T ss_dssp ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHH---HHTSCCCCTT--
T ss_pred cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHh---cccccCcchh--
Confidence 1122334567999999999986 5668889999999999999999999998755443322222 1221111111
Q ss_pred ccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccC
Q 047739 1036 LLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRV 1082 (1099)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 1082 (1099)
..... .+ ..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 249 --~~~~~-~~----~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 249 --KVRSN-CP----KRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp --SSCTT-SC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred --hcccc-CC----HHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 11101 11 134688999999999999999999999998754
No 120
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.2e-37 Score=349.87 Aligned_cols=261 Identities=22% Similarity=0.285 Sum_probs=196.1
Q ss_pred HhccccccccccccceeEEEEEE-CCceEEEEEECCCCCcc----HHHHHHHHHHhhhccCCcceEEeeEEecCCC---c
Q 047739 802 TRQFDEENVLSRTRYGLVFKACY-NDGMVLSIRRLPDGSLD----ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPD---L 873 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~---~ 873 (1099)
.++|++.+.||+|+||.||+|.+ .+++.||+|.+...... .+.+.+|++++++++||||+++++++..... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 45799999999999999999997 46899999999654322 2568899999999999999999999874432 2
Q ss_pred eEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccc
Q 047739 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRL 953 (1099)
Q Consensus 874 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~ 953 (1099)
.|+||||+++|+|.++++.. ..+++..+..++.|++.||+|||+.+|+||||||+||+++.++.+||+|||+++.
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred cEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 48999999999999999753 2489999999999999999999999999999999999999999999999999986
Q ss_pred cCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhcccc-ccc
Q 047739 954 TIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQIT-ELL 1032 (1099)
Q Consensus 954 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~-~~~ 1032 (1099)
...............||+.|+|||++.+..++.++||||+|+++|||++|+.||.............. ..... ...
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~---~~~~~~~~~ 242 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR---EDPIPPSAR 242 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH---CCCCCHHHH
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhc---CCCCCcccc
Confidence 53332222334456799999999999999999999999999999999999999987665443322221 11110 000
Q ss_pred cCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHH-HHhhcccC
Q 047739 1033 EPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIV-FMLEGCRV 1082 (1099)
Q Consensus 1033 d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl-~~L~~~~~ 1082 (1099)
.+.+ . ..+.+++.+||+.||++||++.+++ +.+.+...
T Consensus 243 ~~~~------~------~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 281 (311)
T 3ork_A 243 HEGL------S------ADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281 (311)
T ss_dssp STTC------C------HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred cCCC------C------HHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence 0000 0 1245789999999999999665544 55555443
No 121
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=7.1e-38 Score=352.88 Aligned_cols=270 Identities=22% Similarity=0.324 Sum_probs=213.0
Q ss_pred CHHHHHHHHhccccccccccccceeEEEEEE------CCceEEEEEECCCCCc--cHHHHHHHHHHhhhc-cCCcceEEe
Q 047739 794 TLAETVEATRQFDEENVLSRTRYGLVFKACY------NDGMVLSIRRLPDGSL--DENLFRKEAEFLGKV-RHRNLTVLR 864 (1099)
Q Consensus 794 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~H~niv~l~ 864 (1099)
...+.....++|.+.+.||+|+||.||+|.+ .+++.||+|.+..... ..+.+.+|+++++++ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3444445578899999999999999999985 3468999999975433 235788999999999 799999999
Q ss_pred eEEecCCCceEEEEeecCCCCHHHHHhhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCC
Q 047739 865 GYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQ-----------DGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQ 933 (1099)
Q Consensus 865 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~ 933 (1099)
+++.......++||||+++|+|.+++...... ....+++..+..++.|+++||+|||+.||+||||||+
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~ 177 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 177 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccc
Confidence 99986666679999999999999999863221 0223789999999999999999999999999999999
Q ss_pred CEEECCCCcEEEeccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCc
Q 047739 934 NVLFDADFEAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQD 1012 (1099)
Q Consensus 934 NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~ 1012 (1099)
||+++.++.+||+|||+++..... ..........||+.|+|||++.+..++.++||||+|+++|||++ |+.||.....
T Consensus 178 Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~ 256 (316)
T 2xir_A 178 NILLSEKNVVKICDFGLARDIYKD-PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 256 (316)
T ss_dssp GEEECGGGCEEECCCGGGSCTTTC-TTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC
T ss_pred eEEECCCCCEEECCCccccccccC-ccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccch
Confidence 999999999999999999865322 12223345678899999999999999999999999999999998 9999976554
Q ss_pred hhH-HHHHHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhccc
Q 047739 1013 EDI-VKWVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCR 1081 (1099)
Q Consensus 1013 ~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 1081 (1099)
... ...+.. +..... . .... ..+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 257 ~~~~~~~~~~----~~~~~~-~--------~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 257 DEEFCRRLKE----GTRMRA-P--------DYTT----PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp SHHHHHHHHH----TCCCCC-C--------TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hHHHHHHhcc----CccCCC-C--------CCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 332 222221 111000 0 0001 12457899999999999999999999998764
No 122
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=4.9e-37 Score=344.58 Aligned_cols=268 Identities=22% Similarity=0.247 Sum_probs=204.6
Q ss_pred HHhccccccccccccceeEEEEEE-CCceEEEEEECCCCC------ccHHHHHHHHHHhhhcc---CCcceEEeeEEecC
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACY-NDGMVLSIRRLPDGS------LDENLFRKEAEFLGKVR---HRNLTVLRGYYAGA 870 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~------~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~ 870 (1099)
..++|++.+.||+|+||.||+|.+ .+++.||+|.+.... .....+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467899999999999999999997 468899999985221 12356778888888775 99999999998754
Q ss_pred CC----ceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEe
Q 047739 871 PD----LRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLS 946 (1099)
Q Consensus 871 ~~----~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~ 946 (1099)
.. ..++||||+. |+|.+++... ....+++..+..++.|+++||+|||+.+|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKA---PPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTC---CTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhc---cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEe
Confidence 43 3589999997 6999999753 22348999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhc
Q 047739 947 DFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKG 1026 (1099)
Q Consensus 947 DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 1026 (1099)
|||+++... .........||+.|+|||++.+..++.++||||+||++|||++|+.||......+....+.......
T Consensus 163 Dfg~a~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~ 238 (308)
T 3g33_A 163 DFGLARIYS----YQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 238 (308)
T ss_dssp SCSCTTTST----TCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred eCccccccC----CCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 999998652 2223355689999999999999999999999999999999999999998877766666655543322
Q ss_pred cccccccCc---ccCCCC-CChhHHH-----HHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1027 QITELLEPG---LLELDP-ESSEWEE-----FLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1027 ~~~~~~d~~---~~~~~~-~~~~~~~-----~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
......... ...+.+ ....... -..+.+++.+||+.||++|||+.|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 239 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 111100000 000000 0000000 1234689999999999999999999864
No 123
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=3e-37 Score=344.63 Aligned_cols=267 Identities=17% Similarity=0.195 Sum_probs=210.1
Q ss_pred HhccccccccccccceeEEEEEE-CCceEEEEEECCCCCccHHHHHHHHHHhhhc-cCCcceEEeeEEecCCCceEEEEe
Q 047739 802 TRQFDEENVLSRTRYGLVFKACY-NDGMVLSIRRLPDGSLDENLFRKEAEFLGKV-RHRNLTVLRGYYAGAPDLRLLVYD 879 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV~e 879 (1099)
.++|++.+.||+|+||.||+|.. .+|+.||+|.+.... ..+.+.+|+++++++ +|+|++++++++.. ....++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~-~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQE-GLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEE-TTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCC-CceeEEEEE
Confidence 45799999999999999999997 468999999985432 345688999999999 79999999999874 455699999
Q ss_pred ecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCc-----EEEecccccccc
Q 047739 880 YMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFE-----AHLSDFGLDRLT 954 (1099)
Q Consensus 880 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~-----~kl~DfGla~~~ 954 (1099)
|+ +|+|.+++... ...+++..+..++.|+++||+|||+.||+||||||+||+++.++. +||+|||+++..
T Consensus 87 ~~-~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~ 161 (298)
T 1csn_A 87 LL-GPSLEDLLDLC----GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161 (298)
T ss_dssp CC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred ec-CCCHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence 99 89999999853 234899999999999999999999999999999999999987776 999999999865
Q ss_pred CCCCCCC----ccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchh---HHHHHHHHhhhcc
Q 047739 955 IPTPAEA----STSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDED---IVKWVKKQLQKGQ 1027 (1099)
Q Consensus 955 ~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~---~~~~~~~~~~~~~ 1027 (1099)
....... .......||+.|+|||++.+..++.++||||||+++|||++|+.||....... ....+........
T Consensus 162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (298)
T 1csn_A 162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP 241 (298)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC
T ss_pred ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCcc
Confidence 3222111 12355679999999999999999999999999999999999999998744322 2222222222111
Q ss_pred ccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCCCCCC
Q 047739 1028 ITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPDIPS 1088 (1099)
Q Consensus 1028 ~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 1088 (1099)
..+.. +.+ + ..+.+++.+||+.||++||++++|++.|+++........
T Consensus 242 ~~~~~-~~~--------~----~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~~ 289 (298)
T 1csn_A 242 LRELC-AGF--------P----EEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTE 289 (298)
T ss_dssp HHHHT-TTS--------C----HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCS
T ss_pred HHHHH-hhC--------c----HHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCCC
Confidence 11111 111 0 134578999999999999999999999998765544333
No 124
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-37 Score=347.72 Aligned_cols=244 Identities=22% Similarity=0.342 Sum_probs=202.4
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCC----ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS----LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLL 876 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 876 (1099)
.++|+..+.||+|+||.||+|+.. +|+.||+|.+.... ...+.+.+|+.++++++||||+++++++.+ ....|+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-~~~~~l 83 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD-AQQIFM 83 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC-SSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe-CCEEEE
Confidence 367999999999999999999986 58999999985421 234668899999999999999999999985 456799
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCC
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIP 956 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 956 (1099)
||||+++|+|.+++... ..+++.....++.||+.||+|||+.||+||||||+||+++.++.+||+|||+++...
T Consensus 84 v~e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~- 157 (318)
T 1fot_A 84 IMDYIEGGELFSLLRKS-----QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP- 157 (318)
T ss_dssp EECCCCSCBHHHHHHHT-----SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECS-
T ss_pred EEeCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecC-
Confidence 99999999999999753 348899999999999999999999999999999999999999999999999998642
Q ss_pred CCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcc
Q 047739 957 TPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGL 1036 (1099)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1036 (1099)
......+||+.|+|||++.+..++.++||||+||++|||++|+.||...........+... ... +.+.+
T Consensus 158 -----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~----~~~--~p~~~ 226 (318)
T 1fot_A 158 -----DVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA----ELR--FPPFF 226 (318)
T ss_dssp -----SCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC----CCC--CCTTS
T ss_pred -----CccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC----CCC--CCCCC
Confidence 1234568999999999999999999999999999999999999999876655544443321 110 00100
Q ss_pred cCCCCCChhHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHH
Q 047739 1037 LELDPESSEWEEFLLGVKVALLCTAPDPIDRP-----TMSDIVF 1075 (1099)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RP-----s~~evl~ 1075 (1099)
. ..+.+++.+|++.||++|| +++|+++
T Consensus 227 --------~----~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 227 --------N----EDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp --------C----HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred --------C----HHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 1 1245789999999999999 8899884
No 125
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7e-38 Score=359.73 Aligned_cols=259 Identities=26% Similarity=0.373 Sum_probs=196.9
Q ss_pred ccccccccccccceeEEEEEEC--C--ceEEEEEECCCCC--ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEE
Q 047739 804 QFDEENVLSRTRYGLVFKACYN--D--GMVLSIRRLPDGS--LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLV 877 (1099)
Q Consensus 804 ~~~~~~~lg~G~~g~Vy~~~~~--~--g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 877 (1099)
.|...++||+|+||.||+|.+. + +..||+|.+.... ...+.+.+|++++++++||||+++++++...+...++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4677889999999999999864 2 3578999986432 33477999999999999999999999987555667999
Q ss_pred EeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCC
Q 047739 878 YDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPT 957 (1099)
Q Consensus 878 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 957 (1099)
|||+++|+|.++++.. ...+++..+..++.||++||+|||+.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 170 ~e~~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNE----THNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EECCTTCBHHHHHHCT----TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EECCCCCCHHHHHhhc----ccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccccccccc
Confidence 9999999999999742 244789999999999999999999999999999999999999999999999999865322
Q ss_pred CCC-CccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhccccccccCc
Q 047739 958 PAE-ASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLEPG 1035 (1099)
Q Consensus 958 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1035 (1099)
... ........+|..|+|||.+.+..++.++||||||+++|||++ |..||......+....+... .. ...
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~----~~--~~~-- 317 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG----RR--LLQ-- 317 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTT----CC--CCC--
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcC----CC--CCC--
Confidence 111 122344567889999999999999999999999999999999 77788766555544433221 10 000
Q ss_pred ccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCC
Q 047739 1036 LLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVG 1083 (1099)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 1083 (1099)
+...+ ..+.+++.+||+.||++||++.|+++.|+++...
T Consensus 318 -----p~~~~----~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~ 356 (373)
T 3c1x_A 318 -----PEYCP----DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 356 (373)
T ss_dssp -----CTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred -----CCCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 11111 1245789999999999999999999999987643
No 126
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=2.9e-37 Score=349.00 Aligned_cols=247 Identities=21% Similarity=0.338 Sum_probs=194.4
Q ss_pred HhccccccccccccceeEEEEEE----CCceEEEEEECCCCC-----ccHHHHHHHHHHhhhccCCcceEEeeEEecCCC
Q 047739 802 TRQFDEENVLSRTRYGLVFKACY----NDGMVLSIRRLPDGS-----LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPD 872 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 872 (1099)
.++|+..++||+|+||.||+|+. .+|+.||+|.+.... .....+.+|++++++++||||+++++++... .
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~ 94 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTG-G 94 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECS-S
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcC-C
Confidence 46799999999999999999987 468999999986542 2335678999999999999999999999854 4
Q ss_pred ceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccc
Q 047739 873 LRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR 952 (1099)
Q Consensus 873 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~ 952 (1099)
..|+||||+++|+|.+++... ..+++.....++.||+.||+|||+.||+||||||+||+++.++.+||+|||+++
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 95 KLYLILEYLSGGELFMQLERE-----GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp CEEEEEECCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEEEeCCCCCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 569999999999999999753 247899999999999999999999999999999999999999999999999997
Q ss_pred ccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccc
Q 047739 953 LTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELL 1032 (1099)
Q Consensus 953 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1099)
.... ........+||+.|+|||++.+..++.++||||+|+++|||++|+.||...........+.... ...
T Consensus 170 ~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~--~~~---- 240 (327)
T 3a62_A 170 ESIH---DGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK--LNL---- 240 (327)
T ss_dssp ------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC--CCC----
T ss_pred cccc---CCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC--CCC----
Confidence 5321 1223345679999999999999899999999999999999999999998776655554443321 000
Q ss_pred cCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHH
Q 047739 1033 EPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRP-----TMSDIVF 1075 (1099)
Q Consensus 1033 d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RP-----s~~evl~ 1075 (1099)
.+.+ . ..+.+++.+||+.||++|| ++.|+++
T Consensus 241 p~~~--------~----~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 241 PPYL--------T----QEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp CTTS--------C----HHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred CCCC--------C----HHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 1100 0 1245789999999999999 7888875
No 127
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.4e-37 Score=351.24 Aligned_cols=262 Identities=22% Similarity=0.316 Sum_probs=209.2
Q ss_pred HhccccccccccccceeEEEEEEC--------CceEEEEEECCCCCc--cHHHHHHHHHHhhhc-cCCcceEEeeEEecC
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN--------DGMVLSIRRLPDGSL--DENLFRKEAEFLGKV-RHRNLTVLRGYYAGA 870 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 870 (1099)
.++|.+.+.||+|+||.||+|.+. ++..||+|.+..... ..+.+.+|+++++++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 468999999999999999999873 467899999975432 236788999999999 899999999999854
Q ss_pred CCceEEEEeecCCCCHHHHHhhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECC
Q 047739 871 PDLRLLVYDYMPNGNLGTLLQEASHQ-----------DGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDA 939 (1099)
Q Consensus 871 ~~~~~lV~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~ 939 (1099)
...++||||+++|+|.+++...... ....+++..++.++.||++||+|||+.||+||||||+||+++.
T Consensus 114 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~ 192 (334)
T 2pvf_A 114 -GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE 192 (334)
T ss_dssp -SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT
T ss_pred -CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcC
Confidence 4569999999999999999864321 1235899999999999999999999999999999999999999
Q ss_pred CCcEEEeccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHH
Q 047739 940 DFEAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKW 1018 (1099)
Q Consensus 940 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~ 1018 (1099)
++.+||+|||+++...... .........+|..|+|||++.+..++.++||||+|+++|||++ |+.||......+....
T Consensus 193 ~~~~kL~Dfg~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~ 271 (334)
T 2pvf_A 193 NNVMKIADFGLARDINNID-YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271 (334)
T ss_dssp TCCEEECCCTTCEECTTTS-SEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH
T ss_pred CCCEEEccccccccccccc-cccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHH
Confidence 9999999999998653211 1122344567889999999998889999999999999999999 9999987766555444
Q ss_pred HHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccC
Q 047739 1019 VKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRV 1082 (1099)
Q Consensus 1019 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 1082 (1099)
+..... .. .. .... ..+.+++.+||+.||++||++.|+++.|+++..
T Consensus 272 ~~~~~~----~~-~~--------~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 272 LKEGHR----MD-KP--------ANCT----NELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp HHHTCC----CC-CC--------TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhcCCC----CC-CC--------ccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 333211 00 00 0111 124578999999999999999999999998864
No 128
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.3e-37 Score=358.95 Aligned_cols=281 Identities=21% Similarity=0.322 Sum_probs=200.9
Q ss_pred HHHhccccccccccccceeEEEEEEC-CceEEEEEECCCCC---ccHHHHHHHHHHhhhcc-CCcceEEeeEEecCC-Cc
Q 047739 800 EATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS---LDENLFRKEAEFLGKVR-HRNLTVLRGYYAGAP-DL 873 (1099)
Q Consensus 800 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-~~ 873 (1099)
...++|++.+.||+|+||.||+|.+. +|+.||+|++.... ...+.+.+|+.+++++. ||||+++++++.... ..
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 35678999999999999999999875 58999999985432 23466789999999997 999999999987433 35
Q ss_pred eEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccc
Q 047739 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRL 953 (1099)
Q Consensus 874 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~ 953 (1099)
.|+||||++ |+|.+++.. ..+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+|+.
T Consensus 86 ~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 158 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRA------NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRS 158 (388)
T ss_dssp EEEEEECCS-EEHHHHHHH------TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEecccC-cCHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence 799999997 699999875 2488999999999999999999999999999999999999999999999999986
Q ss_pred cCCCC------------------CCCccccccccCccccCcccccc-CCCCCcCchhhHHHHHHHHHhCCCCCCCCCchh
Q 047739 954 TIPTP------------------AEASTSTTAVGTLGYVSPEAALT-GETTKESDVYSFGIVLLELLTGKRPVMFTQDED 1014 (1099)
Q Consensus 954 ~~~~~------------------~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~ 1014 (1099)
..... .........+||++|+|||++.+ ..++.++||||+||++|||++|+.||.+.+..+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~ 238 (388)
T 3oz6_A 159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN 238 (388)
T ss_dssp SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 43211 01122345689999999999886 678999999999999999999999998877666
Q ss_pred HHHHHHHHhhhccccccc---cC---------------cccCCCCCChhHHH-----------HHHHHHHHHhcCCCCCC
Q 047739 1015 IVKWVKKQLQKGQITELL---EP---------------GLLELDPESSEWEE-----------FLLGVKVALLCTAPDPI 1065 (1099)
Q Consensus 1015 ~~~~~~~~~~~~~~~~~~---d~---------------~~~~~~~~~~~~~~-----------~~~~~~li~~Cl~~dP~ 1065 (1099)
....+............. .+ ...........+.. -..+.+++.+||+.||+
T Consensus 239 ~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~ 318 (388)
T 3oz6_A 239 QLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPN 318 (388)
T ss_dssp HHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcc
Confidence 655554433221110000 00 00000000000100 12356899999999999
Q ss_pred CCCCHHHHHHH--hhcccCCCCCC
Q 047739 1066 DRPTMSDIVFM--LEGCRVGPDIP 1087 (1099)
Q Consensus 1066 ~RPs~~evl~~--L~~~~~~~~~~ 1087 (1099)
+|||++|+++. +.......+.+
T Consensus 319 ~R~t~~e~l~Hp~~~~~~~~~~~~ 342 (388)
T 3oz6_A 319 KRISANDALKHPFVSIFHNPNEEP 342 (388)
T ss_dssp GSCCHHHHTTSTTTTTTCCGGGCC
T ss_pred cCCCHHHHhCCHHHHHhcCCccCC
Confidence 99999999876 44443333333
No 129
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.2e-37 Score=347.28 Aligned_cols=270 Identities=21% Similarity=0.300 Sum_probs=193.5
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCC--ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS--LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVY 878 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 878 (1099)
.++|+..+.||+|+||.||+|... +|+.||+|.+.... ...+.+.+|++++++++||||+++++++.. ++..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~ 82 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHT-ENKLTLVF 82 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECC-TTEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEE-CCeEEEEE
Confidence 457899999999999999999875 58899999985432 234678899999999999999999999985 45669999
Q ss_pred eecCCCCHHHHHhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCC
Q 047739 879 DYMPNGNLGTLLQEASHQ-DGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPT 957 (1099)
Q Consensus 879 e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 957 (1099)
||++ |+|.+++...... ....+++..+..++.||++||+|||+.||+||||||+||+++.++.+||+|||+++....
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~- 160 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGI- 160 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTS-
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCC-
Confidence 9998 6999999764322 234589999999999999999999999999999999999999999999999999986521
Q ss_pred CCCCccccccccCccccCccccccC-CCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhcccc------c
Q 047739 958 PAEASTSTTAVGTLGYVSPEAALTG-ETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQIT------E 1030 (1099)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~------~ 1030 (1099)
.........||..|+|||++.+. .++.++||||+||++|||++|+.||......+....+.......... .
T Consensus 161 --~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 238 (317)
T 2pmi_A 161 --PVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTK 238 (317)
T ss_dssp --CCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGG
T ss_pred --CcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhh
Confidence 11223456789999999998764 68999999999999999999999998877766666555443221100 0
Q ss_pred c--ccCcccCCCCC-ChhH-------HHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1031 L--LEPGLLELDPE-SSEW-------EEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1031 ~--~d~~~~~~~~~-~~~~-------~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
. ..+......+. .... ..-..+.+++.+||+.||++|||++|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 239 LPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0 00000000000 0000 000235689999999999999999999863
No 130
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=8.5e-38 Score=353.23 Aligned_cols=264 Identities=21% Similarity=0.348 Sum_probs=210.6
Q ss_pred HHHhccccccccccccceeEEEEEEC------CceEEEEEECCCCCc--cHHHHHHHHHHhhhccCCcceEEeeEEecCC
Q 047739 800 EATRQFDEENVLSRTRYGLVFKACYN------DGMVLSIRRLPDGSL--DENLFRKEAEFLGKVRHRNLTVLRGYYAGAP 871 (1099)
Q Consensus 800 ~~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 871 (1099)
...++|+..+.||+|+||.||+|.+. .+..||+|.+..... ....+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~- 100 (322)
T 1p4o_A 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG- 100 (322)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS-
T ss_pred chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC-
Confidence 34678999999999999999999865 368899999975433 235688999999999999999999999854
Q ss_pred CceEEEEeecCCCCHHHHHhhhcc-----CCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEe
Q 047739 872 DLRLLVYDYMPNGNLGTLLQEASH-----QDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLS 946 (1099)
Q Consensus 872 ~~~~lV~e~~~~gsL~~~l~~~~~-----~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~ 946 (1099)
...++||||+++|+|.+++..... .....+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+
T Consensus 101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~ 180 (322)
T 1p4o_A 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIG 180 (322)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEEC
T ss_pred CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEEC
Confidence 456999999999999999976331 112347899999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhh
Q 047739 947 DFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQK 1025 (1099)
Q Consensus 947 DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~ 1025 (1099)
|||+++...... .........+|+.|+|||++.+..++.++||||+|+++|||++ |+.||......+....+..
T Consensus 181 Dfg~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~---- 255 (322)
T 1p4o_A 181 DFGMTRDIYETD-YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME---- 255 (322)
T ss_dssp CTTCCCGGGGGG-CEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHT----
T ss_pred cCcccccccccc-ccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHc----
Confidence 999997542211 1122334567889999999999999999999999999999999 8999987665554443322
Q ss_pred ccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccC
Q 047739 1026 GQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRV 1082 (1099)
Q Consensus 1026 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 1082 (1099)
+...... ...+ ..+.+++.+||+.||++|||+.|+++.|++...
T Consensus 256 ~~~~~~~---------~~~~----~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 256 GGLLDKP---------DNCP----DMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp TCCCCCC---------TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred CCcCCCC---------CCCC----HHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 1111100 0011 124578999999999999999999999998755
No 131
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.8e-37 Score=353.17 Aligned_cols=244 Identities=20% Similarity=0.259 Sum_probs=203.0
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCC----ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS----LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLL 876 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 876 (1099)
.++|+..+.||+|+||.||+|+.. +|+.||+|.+.... ...+.+.+|++++++++||||+++++++.+ ....|+
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~l 118 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD-NSNLYM 118 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-CCEEEE
Confidence 357999999999999999999986 58999999985322 234678899999999999999999999985 455799
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCC
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIP 956 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 956 (1099)
||||+++|+|.+++.+.. .+++..+..++.||+.||+|||+.||+||||||+||+++.++.+||+|||+++....
T Consensus 119 v~e~~~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 119 VMEYVAGGEMFSHLRRIG-----RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp EEECCTTCBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEcCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccC
Confidence 999999999999998642 389999999999999999999999999999999999999999999999999986521
Q ss_pred CCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcc
Q 047739 957 TPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGL 1036 (1099)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1036 (1099)
.....+||+.|+|||++.+..++.++||||+||++|||++|+.||......+....+... ... +...+
T Consensus 194 ------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~----~~~--~p~~~ 261 (350)
T 1rdq_E 194 ------RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVR--FPSHF 261 (350)
T ss_dssp ------CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC----CCC--CCTTC
T ss_pred ------CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcC----CCC--CCCCC
Confidence 233568999999999999999999999999999999999999999877665555444332 110 01111
Q ss_pred cCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCC-----HHHHHH
Q 047739 1037 LELDPESSEWEEFLLGVKVALLCTAPDPIDRPT-----MSDIVF 1075 (1099)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs-----~~evl~ 1075 (1099)
. ..+.+++.+||+.||++||+ ++||++
T Consensus 262 --------~----~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 262 --------S----SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp --------C----HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred --------C----HHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 1 12458899999999999998 888875
No 132
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.2e-37 Score=344.11 Aligned_cols=254 Identities=19% Similarity=0.285 Sum_probs=198.8
Q ss_pred HhccccccccccccceeEEEEEECC-c-------eEEEEEECCCCC-ccHHHHHHHHHHhhhccCCcceEEeeEEecCCC
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYND-G-------MVLSIRRLPDGS-LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPD 872 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~-g-------~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 872 (1099)
.++|...+.||+|+||.||+|.+.. + ..||+|.+.... ...+.+.+|++++++++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 85 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD- 85 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT-
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC-
Confidence 4579999999999999999998753 2 579999986433 34577999999999999999999999998544
Q ss_pred ceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCc--------EE
Q 047739 873 LRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFE--------AH 944 (1099)
Q Consensus 873 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~--------~k 944 (1099)
..++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+.+|+||||||+||+++.++. +|
T Consensus 86 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~k 161 (289)
T 4fvq_A 86 ENILVQEFVKFGSLDTYLKKNK----NCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIK 161 (289)
T ss_dssp CCEEEEECCTTCBHHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred CCEEEEECCCCCCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceee
Confidence 4599999999999999998632 34899999999999999999999999999999999999998877 99
Q ss_pred EeccccccccCCCCCCCccccccccCccccCcccccc-CCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHh
Q 047739 945 LSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALT-GETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQL 1023 (1099)
Q Consensus 945 l~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~ 1023 (1099)
|+|||+++... ......||..|+|||++.+ ..++.++||||+|+++|||++|..|+..............
T Consensus 162 l~Dfg~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~-- 232 (289)
T 4fvq_A 162 LSDPGISITVL-------PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE-- 232 (289)
T ss_dssp ECCCCSCTTTS-------CHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH--
T ss_pred eccCccccccc-------CccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhh--
Confidence 99999986541 1233568899999999987 6789999999999999999996555443333222111111
Q ss_pred hhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCCC
Q 047739 1024 QKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPD 1085 (1099)
Q Consensus 1024 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 1085 (1099)
..........+ .+.+++.+||+.||++|||+.|+++.|+++..+..
T Consensus 233 ~~~~~~~~~~~----------------~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~ 278 (289)
T 4fvq_A 233 DRHQLPAPKAA----------------ELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL 278 (289)
T ss_dssp TTCCCCCCSSC----------------TTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC----
T ss_pred ccCCCCCCCCH----------------HHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence 11111111111 13578999999999999999999999998865433
No 133
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3.2e-37 Score=350.92 Aligned_cols=248 Identities=22% Similarity=0.319 Sum_probs=202.9
Q ss_pred HHhccccccccccccceeEEEEEECC-ceEEEEEECCCC----CccHHHHHHHHHHhhhc-cCCcceEEeeEEecCCCce
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDG----SLDENLFRKEAEFLGKV-RHRNLTVLRGYYAGAPDLR 874 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 874 (1099)
..++|+..++||+|+||.||+|+.+. |+.||+|.+... ....+.+.+|.++++.+ +||||+++++++.+ .+..
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~-~~~~ 96 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT-MDRL 96 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEEC-SSEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEc-CCEE
Confidence 34689999999999999999999875 789999998542 22346688999999988 79999999999985 4567
Q ss_pred EEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccccc
Q 047739 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLT 954 (1099)
Q Consensus 875 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~ 954 (1099)
|+||||+++|+|.+++... ..+++..+..++.||+.||+|||+.||+||||||+||+++.++.+||+|||+++..
T Consensus 97 ~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 171 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 171 (353)
T ss_dssp EEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence 9999999999999999864 24899999999999999999999999999999999999999999999999999853
Q ss_pred CCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccC
Q 047739 955 IPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEP 1034 (1099)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1034 (1099)
.. ........+||+.|+|||++.+..++.++||||+||++|||++|+.||......+..+.+... ... +..
T Consensus 172 ~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~----~~~--~p~ 242 (353)
T 2i0e_A 172 IW---DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH----NVA--YPK 242 (353)
T ss_dssp CC---TTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC----CCC--CCT
T ss_pred cc---CCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhC----CCC--CCC
Confidence 21 222345678999999999999999999999999999999999999999877666555544431 110 011
Q ss_pred cccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCC-----HHHHHH
Q 047739 1035 GLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPT-----MSDIVF 1075 (1099)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs-----~~evl~ 1075 (1099)
.+ . ..+.+++.+||+.||++||+ ++||++
T Consensus 243 ~~--------s----~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 243 SM--------S----KEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp TS--------C----HHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred CC--------C----HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 00 1 13457899999999999995 577764
No 134
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=6.4e-37 Score=349.73 Aligned_cols=254 Identities=19% Similarity=0.305 Sum_probs=201.4
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCC------CCccHHHHHHHHHHhhhccCCcceEEeeEEecCCCce
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPD------GSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR 874 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~------~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 874 (1099)
.++|++.+.||+|+||.||+|... +|+.||+|.+.. .....+.+.+|++++++++||||+++++++.+ ....
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~ 101 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS-DGML 101 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCEE
Confidence 467999999999999999999875 589999999842 12245779999999999999999999999985 4556
Q ss_pred EEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCc---EEEeccccc
Q 047739 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFE---AHLSDFGLD 951 (1099)
Q Consensus 875 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~---~kl~DfGla 951 (1099)
|+||||+++|+|.+++..... ....+++..+..++.||++||+|||+.+|+||||||+||+++.++. +||+|||++
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEEEeCCCCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 999999999999988875332 2345899999999999999999999999999999999999986654 999999999
Q ss_pred cccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhcccccc
Q 047739 952 RLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITEL 1031 (1099)
Q Consensus 952 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1099)
+.... ........+||+.|+|||++.+..++.++||||+||++|||++|+.||.... ......+.. +... .
T Consensus 181 ~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~i~~----~~~~-~ 251 (351)
T 3c0i_A 181 IQLGE---SGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIK----GKYK-M 251 (351)
T ss_dssp EECCT---TSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-HHHHHHHHH----TCCC-C
T ss_pred eEecC---CCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-HHHHHHHHc----CCCC-C
Confidence 86532 1223345689999999999999899999999999999999999999997643 222222222 1110 0
Q ss_pred ccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1032 LEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1032 ~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
....+... -..+.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~~~---------s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 252 NPRQWSHI---------SESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CHHHHTTS---------CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CccccccC---------CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00000000 023457999999999999999999985
No 135
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=3.3e-37 Score=351.63 Aligned_cols=251 Identities=23% Similarity=0.331 Sum_probs=187.3
Q ss_pred HHhccccccccccccceeEEEEEEC-CceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEe
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYD 879 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e 879 (1099)
..++|++.+.||+|+||.||+|.+. +++.||+|.+... ...+.+.+|++++++++||||+++++++.. +...++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT-VDKKIVRTEIGVLLRLSHPNIIKLKEIFET-PTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEEC-SSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc-hhHHHHHHHHHHHHhCCCCCCcceeeeEec-CCeEEEEEE
Confidence 3567999999999999999999987 4789999998653 245678899999999999999999999985 455699999
Q ss_pred ecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECC---CCcEEEeccccccccCC
Q 047739 880 YMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDA---DFEAHLSDFGLDRLTIP 956 (1099)
Q Consensus 880 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~---~~~~kl~DfGla~~~~~ 956 (1099)
|+++|+|.+++... ..+++..+..++.|+++||+|||+.||+||||||+||+++. ++.+||+|||+++....
T Consensus 129 ~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 129 LVTGGELFDRIVEK-----GYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp CCCSCBHHHHHTTC-----SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred eCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 99999999999742 34899999999999999999999999999999999999975 88999999999986421
Q ss_pred CCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchh-HHHHHHHHhhhccccccccCc
Q 047739 957 TPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDED-IVKWVKKQLQKGQITELLEPG 1035 (1099)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~ 1035 (1099)
........||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+. ..... ...+.
T Consensus 204 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~----~~~~~-~~~~~ 274 (349)
T 2w4o_A 204 ----QVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRIL----NCEYY-FISPW 274 (349)
T ss_dssp -------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHH----TTCCC-CCTTT
T ss_pred ----ccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHH----hCCCc-cCCch
Confidence 222345679999999999999999999999999999999999999997655443 222221 11110 11111
Q ss_pred ccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1036 LLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
+.. .. ..+.+++.+||+.||++|||+.|+++.
T Consensus 275 ~~~-----~~----~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 275 WDE-----VS----LNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp TTT-----SC----HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhh-----CC----HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 100 00 134579999999999999999999874
No 136
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.4e-37 Score=377.81 Aligned_cols=255 Identities=20% Similarity=0.312 Sum_probs=201.4
Q ss_pred cccccc-ccccccceeEEEEEEC---CceEEEEEECCCCC--ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEE
Q 047739 804 QFDEEN-VLSRTRYGLVFKACYN---DGMVLSIRRLPDGS--LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLV 877 (1099)
Q Consensus 804 ~~~~~~-~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 877 (1099)
++...+ .||+|+||.||+|.++ ++..||||++.... ...+.|.+|++++++++|||||++++++.. +..++|
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~--~~~~lv 413 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA--EALMLV 413 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES--SSEEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc--CCeEEE
Confidence 344444 7999999999999874 56789999997543 345789999999999999999999999975 346999
Q ss_pred EeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCC
Q 047739 878 YDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPT 957 (1099)
Q Consensus 878 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 957 (1099)
|||+++|+|.+++... ...+++..+..++.||++||+|||+.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 414 ~E~~~~g~L~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~ 489 (613)
T 2ozo_A 414 MEMAGGGPLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGAD 489 (613)
T ss_dssp EECCTTCBHHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--
T ss_pred EEeCCCCcHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCC
Confidence 9999999999999642 345899999999999999999999999999999999999999999999999999865322
Q ss_pred CCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhccccccccCcc
Q 047739 958 PAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGL 1036 (1099)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1036 (1099)
...........+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+....+... .....
T Consensus 490 ~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~----~~~~~----- 560 (613)
T 2ozo_A 490 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG----KRMEC----- 560 (613)
T ss_dssp ------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTT----CCCCC-----
T ss_pred CceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC----CCCCC-----
Confidence 222222334456789999999999999999999999999999998 99999887766655544332 11000
Q ss_pred cCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhccc
Q 047739 1037 LELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCR 1081 (1099)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 1081 (1099)
+...+ ..+.+++.+||+.||++||++.+|++.|+.+.
T Consensus 561 ----p~~~~----~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 597 (613)
T 2ozo_A 561 ----PPECP----PELYALMSDCWIYKWEDRPDFLTVEQRMRACY 597 (613)
T ss_dssp ----CTTCC----HHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred ----CCcCC----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 01111 13457899999999999999999999998764
No 137
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.4e-38 Score=361.83 Aligned_cols=258 Identities=22% Similarity=0.274 Sum_probs=205.3
Q ss_pred HHHHHHhccccccccccccceeEEEEEEC-CceEEEEEECCCCC----ccHHHHHHHHHHhhhccCCcceEEeeEEecCC
Q 047739 797 ETVEATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS----LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAP 871 (1099)
Q Consensus 797 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 871 (1099)
+.....++|+..++||+|+||.||+|+.+ +|+.||+|++.... ...+.+.+|.+++.+++||||+++++++.+ .
T Consensus 55 ~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~-~ 133 (412)
T 2vd5_A 55 EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD-E 133 (412)
T ss_dssp HHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC-S
T ss_pred hccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee-C
Confidence 33345678999999999999999999986 68999999985422 122458899999999999999999999985 4
Q ss_pred CceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccc
Q 047739 872 DLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLD 951 (1099)
Q Consensus 872 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla 951 (1099)
...|+||||+++|+|.+++.+.+ ..+++..+..++.||+.||+|||+.+|+||||||+||+++.++.+||+|||++
T Consensus 134 ~~~~lVmE~~~gg~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla 209 (412)
T 2vd5_A 134 NYLYLVMEYYVGGDLLTLLSKFG----ERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSC 209 (412)
T ss_dssp SEEEEEECCCCSCBHHHHHHHHS----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEcCCCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhh
Confidence 56799999999999999998642 35899999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCccccccccCccccCccccc-------cCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhh
Q 047739 952 RLTIPTPAEASTSTTAVGTLGYVSPEAAL-------TGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQ 1024 (1099)
Q Consensus 952 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~ 1024 (1099)
+..... ........+||+.|+|||++. ...++.++||||+||++|||++|+.||......+....+.....
T Consensus 210 ~~~~~~--~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~ 287 (412)
T 2vd5_A 210 LKLRAD--GTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKE 287 (412)
T ss_dssp EECCTT--SCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHH
T ss_pred eeccCC--CccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhccc
Confidence 865221 122234568999999999987 35689999999999999999999999988776666555543221
Q ss_pred hccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCC---CCHHHHHH
Q 047739 1025 KGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDR---PTMSDIVF 1075 (1099)
Q Consensus 1025 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~R---Ps~~evl~ 1075 (1099)
....+. .+..+ . ..+.+++.+||. +|++| |+++||++
T Consensus 288 ~~~~p~-~~~~~--------s----~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 288 HLSLPL-VDEGV--------P----EEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HCCCC-----CC--------C----HHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred CcCCCc-cccCC--------C----HHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 111110 00111 0 134578999999 99998 68999876
No 138
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=5.4e-37 Score=353.39 Aligned_cols=252 Identities=19% Similarity=0.266 Sum_probs=204.4
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCC-ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEe
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS-LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYD 879 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e 879 (1099)
.++|++.+.||+|+||.||+|... +|+.||+|.+.... .+...+.+|++++++++||||+++++++.+ ....++|||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-~~~~~lv~E 128 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFED-KYEMVLILE 128 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC-SSEEEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEe-CCEEEEEEE
Confidence 467999999999999999999986 58899999986543 344678999999999999999999999985 455699999
Q ss_pred ecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECC--CCcEEEeccccccccCCC
Q 047739 880 YMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDA--DFEAHLSDFGLDRLTIPT 957 (1099)
Q Consensus 880 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~--~~~~kl~DfGla~~~~~~ 957 (1099)
|+++|+|.+++... ...+++..+..++.||+.||+|||+.||+||||||+||+++. ++.+||+|||+++....
T Consensus 129 ~~~gg~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~- 203 (387)
T 1kob_A 129 FLSGGELFDRIAAE----DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP- 203 (387)
T ss_dssp CCCCCBHHHHTTCT----TCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT-
T ss_pred cCCCCcHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCC-
Confidence 99999999998742 235899999999999999999999999999999999999974 57899999999986522
Q ss_pred CCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCccc
Q 047739 958 PAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLL 1037 (1099)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1037 (1099)
........||+.|+|||++.+..++.++||||+||++|||++|+.||......+....+... ... .....+.
T Consensus 204 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~----~~~-~~~~~~~ 275 (387)
T 1kob_A 204 ---DEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRC----DWE-FDEDAFS 275 (387)
T ss_dssp ---TSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHC----CCC-CCSSTTT
T ss_pred ---CcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhC----CCC-CCccccc
Confidence 12234457999999999999999999999999999999999999999876665554443332 110 0000000
Q ss_pred CCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1038 ELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
... ..+.+++.+||+.||++|||+.|+++.
T Consensus 276 -----~~s----~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 276 -----SVS----PEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp -----TSC----HHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred -----cCC----HHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 001 124589999999999999999999874
No 139
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.4e-37 Score=343.62 Aligned_cols=253 Identities=26% Similarity=0.383 Sum_probs=200.7
Q ss_pred HhccccccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEeec
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYM 881 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e~~ 881 (1099)
.++|+..+.||+|+||.||+|.+. |+.||+|.+.... ..+.+.+|++++++++||||+++++++.......++||||+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 97 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 97 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence 468999999999999999999886 8899999997543 55779999999999999999999999876655679999999
Q ss_pred CCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCCCCC
Q 047739 882 PNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTPAEA 961 (1099)
Q Consensus 882 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 961 (1099)
++|+|.+++..... ..+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++....
T Consensus 98 ~~~~L~~~l~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~----- 169 (278)
T 1byg_A 98 AKGSLVDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS----- 169 (278)
T ss_dssp TTEEHHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred CCCCHHHHHHhccc---ccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccc-----
Confidence 99999999975321 2378899999999999999999999999999999999999999999999999875421
Q ss_pred ccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhccccccccCcccCCC
Q 047739 962 STSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLELD 1040 (1099)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 1040 (1099)
......++..|+|||.+.+..++.++||||+|+++|||++ |+.||......+....+.. +.... ..
T Consensus 170 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~----~~~~~-~~------- 236 (278)
T 1byg_A 170 -TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK----GYKMD-AP------- 236 (278)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTT----TCCCC-CC-------
T ss_pred -cccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc----CCCCC-Cc-------
Confidence 1223467889999999998999999999999999999998 9999987666555443322 11000 00
Q ss_pred CCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccC
Q 047739 1041 PESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRV 1082 (1099)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 1082 (1099)
...+ ..+.+++.+||+.||++||++.|+++.|+++..
T Consensus 237 -~~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 237 -DGCP----PAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp -TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -ccCC----HHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 0011 124578999999999999999999999987753
No 140
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=3.2e-37 Score=341.21 Aligned_cols=255 Identities=22% Similarity=0.392 Sum_probs=204.6
Q ss_pred HhccccccccccccceeEEEEEECC----ceEEEEEECCCCC--ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYND----GMVLSIRRLPDGS--LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 875 (1099)
.++|...+.||+|+||.||+|.+.+ +..||+|.+.... ...+.+.+|++++++++||||+++++++.++ ..+
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~ 88 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE--PTW 88 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS--SCE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC--CCE
Confidence 4689999999999999999998643 4579999987543 2346789999999999999999999998743 348
Q ss_pred EEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccC
Q 047739 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTI 955 (1099)
Q Consensus 876 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 955 (1099)
+||||+++|+|.+++.... ..+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++...
T Consensus 89 ~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 164 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIE 164 (281)
T ss_dssp EEEECCTTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred EEEecCCCCCHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcccc
Confidence 9999999999999997532 348899999999999999999999999999999999999999999999999998652
Q ss_pred CCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhccccccccC
Q 047739 956 PTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLEP 1034 (1099)
Q Consensus 956 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1034 (1099)
.. .........+|..|+|||++.+..++.++||||||+++|||++ |+.||......+....+...... ..
T Consensus 165 ~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~-~~------ 235 (281)
T 3cc6_A 165 DE--DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRL-PK------ 235 (281)
T ss_dssp ----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCC-CC------
T ss_pred cc--cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCC-CC------
Confidence 21 1222344567889999999998899999999999999999998 99999876666655444332110 00
Q ss_pred cccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhccc
Q 047739 1035 GLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCR 1081 (1099)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 1081 (1099)
+...+ ..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 236 ------~~~~~----~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 236 ------PDLCP----PVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp ------CTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ------CCCCC----HHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 00011 12457899999999999999999999998764
No 141
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=5.5e-37 Score=353.08 Aligned_cols=246 Identities=20% Similarity=0.331 Sum_probs=195.4
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCC----ccHHHHHHHHHHhhhc-cCCcceEEeeEEecCCCceE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS----LDENLFRKEAEFLGKV-RHRNLTVLRGYYAGAPDLRL 875 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~ 875 (1099)
.++|++.++||+|+||.||+|+.+ +++.||+|++.... ...+.+.+|..+++++ +||||+++++++.+ ....|
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~-~~~~~ 129 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-ESRLF 129 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEEC-SSEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEE-CCEEE
Confidence 467999999999999999999986 47899999985432 2234588999999887 89999999999985 45679
Q ss_pred EEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccC
Q 047739 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTI 955 (1099)
Q Consensus 876 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 955 (1099)
+||||+++|+|.+++.+. ..+++..+..++.||+.||+|||+.||+||||||+||+++.++.+||+|||+|+...
T Consensus 130 lV~E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEEcCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 999999999999999863 348999999999999999999999999999999999999999999999999998532
Q ss_pred CCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchh-----HHHHHHHHhhhccccc
Q 047739 956 PTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDED-----IVKWVKKQLQKGQITE 1030 (1099)
Q Consensus 956 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~-----~~~~~~~~~~~~~~~~ 1030 (1099)
.........+||+.|+|||++.+..++.++||||+||++|||++|+.||......+ ....+.+.+......
T Consensus 205 ---~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~- 280 (396)
T 4dc2_A 205 ---RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR- 280 (396)
T ss_dssp ---CTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCC-
T ss_pred ---cCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccC-
Confidence 12233456789999999999999999999999999999999999999996432211 112222222222110
Q ss_pred cccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCH
Q 047739 1031 LLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTM 1070 (1099)
Q Consensus 1031 ~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~ 1070 (1099)
++.. .. ..+.+++.+||+.||++||++
T Consensus 281 --------~p~~-~s----~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 281 --------IPRS-LS----VKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp --------CCTT-SC----HHHHHHHHHHTCSCTTTSTTC
T ss_pred --------CCCc-CC----HHHHHHHHHHhcCCHhHcCCC
Confidence 0001 01 124588999999999999985
No 142
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=4.9e-37 Score=342.55 Aligned_cols=274 Identities=15% Similarity=0.177 Sum_probs=214.0
Q ss_pred HhccccccccccccceeEEEEEE-CCceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEee
Q 047739 802 TRQFDEENVLSRTRYGLVFKACY-NDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDY 880 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e~ 880 (1099)
.++|+..+.||+|+||.||+|.. .+|+.||+|.+.... ..+.+.+|++++++++|++++..+.++.......++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEe
Confidence 46899999999999999999997 568999999885433 3356899999999999999888888776667777999999
Q ss_pred cCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEE---CCCCcEEEeccccccccCCC
Q 047739 881 MPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLF---DADFEAHLSDFGLDRLTIPT 957 (1099)
Q Consensus 881 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll---~~~~~~kl~DfGla~~~~~~ 957 (1099)
+ +|+|.+++... ...+++..+..++.|++.||+|||+.+|+||||||+||++ +.++.+||+|||+++.....
T Consensus 87 ~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 87 L-GPSLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp C-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred c-CCCHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 9 89999999743 2358999999999999999999999999999999999999 48889999999999865322
Q ss_pred CCCC----ccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCc---hhHHHHHHHHhhhccccc
Q 047739 958 PAEA----STSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQD---EDIVKWVKKQLQKGQITE 1030 (1099)
Q Consensus 958 ~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~---~~~~~~~~~~~~~~~~~~ 1030 (1099)
.... .......||..|+|||.+.+..++.++||||||+++|||++|+.||..... ......+...........
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEV 241 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHH
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHH
Confidence 2111 123456899999999999999999999999999999999999999976332 223333332211111110
Q ss_pred cccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCCCCCCCCCCCC
Q 047739 1031 LLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPDIPSSADPTT 1094 (1099)
Q Consensus 1031 ~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~ 1094 (1099)
..+.+ + ..+.+++.+||+.||++|||+.||++.|+++.............|
T Consensus 242 -~~~~~--------~----~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~~~~~dw 292 (296)
T 3uzp_A 242 -LCKGY--------P----SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 292 (296)
T ss_dssp -HTTTS--------C----HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCCSSCCCGG
T ss_pred -HHhhC--------C----HHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCcccccccc
Confidence 01111 0 124578999999999999999999999998876655544444433
No 143
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=6e-37 Score=352.25 Aligned_cols=248 Identities=20% Similarity=0.291 Sum_probs=196.1
Q ss_pred cccccccccccceeEEEEEEC-CceEEEEEECCCCC-ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEeecC
Q 047739 805 FDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS-LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMP 882 (1099)
Q Consensus 805 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e~~~ 882 (1099)
|...++||+|+||.||+|... +|..||+|.+.... ...+.+.+|++++++++||||+++++++.. ....++||||++
T Consensus 91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~lv~E~~~ 169 (373)
T 2x4f_A 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFES-KNDIVLVMEYVD 169 (373)
T ss_dssp EEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEEECCT
T ss_pred eecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEE-CCEEEEEEeCCC
Confidence 344678999999999999875 58999999986544 345779999999999999999999999985 455799999999
Q ss_pred CCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEE--CCCCcEEEeccccccccCCCCCC
Q 047739 883 NGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLF--DADFEAHLSDFGLDRLTIPTPAE 960 (1099)
Q Consensus 883 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll--~~~~~~kl~DfGla~~~~~~~~~ 960 (1099)
+|+|.+++.... ..+++..+..++.||++||+|||+.+|+||||||+||++ +.++.+||+|||+++....
T Consensus 170 ~~~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~---- 241 (373)
T 2x4f_A 170 GGELFDRIIDES----YNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP---- 241 (373)
T ss_dssp TCEEHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCT----
T ss_pred CCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCC----
Confidence 999999987532 348999999999999999999999999999999999999 6778999999999986532
Q ss_pred CccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcccCCC
Q 047739 961 ASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLELD 1040 (1099)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 1040 (1099)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||....+.+....+..... .. .+..+...
T Consensus 242 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~--~~---~~~~~~~~- 315 (373)
T 2x4f_A 242 REKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRW--DL---EDEEFQDI- 315 (373)
T ss_dssp TCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC--CS---CSGGGTTS-
T ss_pred ccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC--CC---ChhhhccC-
Confidence 1223445799999999999988899999999999999999999999987766555444433211 00 01111000
Q ss_pred CCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1041 PESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
. ..+.+++.+||+.||++|||+.|+++
T Consensus 316 ----~----~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 316 ----S----EEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp ----C----HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ----C----HHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 13468999999999999999999987
No 144
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=5.2e-37 Score=352.15 Aligned_cols=249 Identities=21% Similarity=0.300 Sum_probs=199.3
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCC----CccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDG----SLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLL 876 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 876 (1099)
.++|.+.+.||+|+||.||+|... +++.||+|.+... ....+.+.+|++++++++|||||++++++.+. ...|+
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~-~~~~l 92 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDE-EDMFM 92 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-SEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC-CEEEE
Confidence 367999999999999999999986 4789999998532 22346788999999999999999999999854 55699
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCC
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIP 956 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 956 (1099)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+.||+||||||+||+++.++.+||+|||+++...
T Consensus 93 v~e~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~- 166 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQQN-----VHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP- 166 (384)
T ss_dssp EECCCTTEEHHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeecc-
Confidence 99999999999999752 348999999999999999999999999999999999999999999999999998652
Q ss_pred CCCCCccccccccCccccCcccccc---CCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhcccccccc
Q 047739 957 TPAEASTSTTAVGTLGYVSPEAALT---GETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLE 1033 (1099)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 1033 (1099)
........+||+.|+|||++.. ..++.++||||+||++|||++|+.||...........+... ...... ..
T Consensus 167 ---~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~-~~~~~~--~p 240 (384)
T 4fr4_A 167 ---RETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF-ETTVVT--YP 240 (384)
T ss_dssp ---TTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHH-HHCCCC--CC
T ss_pred ---CCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHH-hhcccC--CC
Confidence 2233456789999999999874 45899999999999999999999999765443332222221 111100 00
Q ss_pred CcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCC-HHHHHH
Q 047739 1034 PGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPT-MSDIVF 1075 (1099)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs-~~evl~ 1075 (1099)
..+ . ..+.+++.+||+.||++||+ ++++.+
T Consensus 241 ~~~--------s----~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 241 SAW--------S----QEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp TTS--------C----HHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred CcC--------C----HHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 000 0 13468899999999999998 777764
No 145
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=5.1e-37 Score=348.38 Aligned_cols=254 Identities=23% Similarity=0.354 Sum_probs=197.1
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCC--CccHHHHHHHHHHhhhccCCcceEEeeEEecCCC------
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDG--SLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPD------ 872 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------ 872 (1099)
.++|+..+.||+|+||.||+|+++ +|+.||+|++... ....+.+.+|++++++++||||+++++++.+...
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 467999999999999999999986 6899999998533 3345779999999999999999999999864332
Q ss_pred --------------------------------------------------ceEEEEeecCCCCHHHHHhhhccCCCCCCC
Q 047739 873 --------------------------------------------------LRLLVYDYMPNGNLGTLLQEASHQDGHVLN 902 (1099)
Q Consensus 873 --------------------------------------------------~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~ 902 (1099)
..++||||+++|+|.+++.... .....+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~ 162 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC--SLEDRE 162 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC--SGGGSC
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc--Cccchh
Confidence 2689999999999999998633 223457
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCCCC---------CccccccccCccc
Q 047739 903 WPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTPAE---------ASTSTTAVGTLGY 973 (1099)
Q Consensus 903 ~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~---------~~~~~~~~gt~~y 973 (1099)
+..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++........ ........||+.|
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 242 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred hHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence 7788999999999999999999999999999999999999999999999865332111 1223456799999
Q ss_pred cCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcccCCCCCChhHHHHHHHH
Q 047739 974 VSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGV 1053 (1099)
Q Consensus 974 ~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 1053 (1099)
+|||++.+..++.++||||+|+++|||++|..|+. +... ............. .......+.
T Consensus 243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~-----~~~~-~~~~~~~~~~~~~-------------~~~~~~~~~ 303 (332)
T 3qd2_B 243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM-----ERVR-IITDVRNLKFPLL-------------FTQKYPQEH 303 (332)
T ss_dssp SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH-----HHHH-HHHHHHTTCCCHH-------------HHHHCHHHH
T ss_pred cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh-----HHHH-HHHHhhccCCCcc-------------cccCChhHH
Confidence 99999999999999999999999999999887642 1111 1111111111110 111112346
Q ss_pred HHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1054 KVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1054 ~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
+++.+||+.||++|||+.|+++.
T Consensus 304 ~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 304 MMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHHHccCCCCcCCCHHHHhhc
Confidence 79999999999999999999874
No 146
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=2.2e-37 Score=353.04 Aligned_cols=267 Identities=17% Similarity=0.183 Sum_probs=199.1
Q ss_pred HhccccccccccccceeEEEEEEC----CceEEEEEECCCCCcc------------HHHHHHHHHHhhhccCCcceEEee
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN----DGMVLSIRRLPDGSLD------------ENLFRKEAEFLGKVRHRNLTVLRG 865 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~------------~~~~~~E~~~l~~l~H~niv~l~~ 865 (1099)
.++|.+.+.||+|+||.||+|.+. .+..||+|........ .+.+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 357999999999999999999986 5788999988654321 134667888999999999999999
Q ss_pred EEecC---CCceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCC-
Q 047739 866 YYAGA---PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADF- 941 (1099)
Q Consensus 866 ~~~~~---~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~- 941 (1099)
++... ....++||||+ +++|.+++.... .+++..+..++.||+.||+|||+.+|+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~ 189 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-----TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNP 189 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-----BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSST
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCC
Confidence 98752 45679999999 999999997532 589999999999999999999999999999999999998877
Q ss_pred -cEEEeccccccccCCCCC----CCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCC-CchhH
Q 047739 942 -EAHLSDFGLDRLTIPTPA----EASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFT-QDEDI 1015 (1099)
Q Consensus 942 -~~kl~DfGla~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~-~~~~~ 1015 (1099)
.+||+|||+++....... .........||..|+|||++.+..++.++|||||||++|||++|+.||... .....
T Consensus 190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~ 269 (345)
T 2v62_A 190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA 269 (345)
T ss_dssp TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHH
T ss_pred CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHH
Confidence 999999999976532211 112234568999999999999999999999999999999999999999643 22222
Q ss_pred HHHHHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccC
Q 047739 1016 VKWVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRV 1082 (1099)
Q Consensus 1016 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 1082 (1099)
......... ..+......... ....+ ..+.+++.+||+.||++||++.+|++.|+....
T Consensus 270 ~~~~~~~~~-~~~~~~~~~~~~---~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 270 VQTAKTNLL-DELPQSVLKWAP---SGSSC----CEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHHH-HTTTHHHHHHSC---TTSCC----HHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHHHHhhc-ccccHHHHhhcc---ccccH----HHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 222222211 111111110000 00000 134678999999999999999999999998765
No 147
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.1e-37 Score=346.87 Aligned_cols=255 Identities=21% Similarity=0.302 Sum_probs=202.7
Q ss_pred Hhcccccc-ccccccceeEEEEEEC---CceEEEEEECCCCCc---cHHHHHHHHHHhhhccCCcceEEeeEEecCCCce
Q 047739 802 TRQFDEEN-VLSRTRYGLVFKACYN---DGMVLSIRRLPDGSL---DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR 874 (1099)
Q Consensus 802 ~~~~~~~~-~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 874 (1099)
.++|.+.+ .||+|+||.||+|.+. .+..||+|.+..... ..+.+.+|++++++++||||+++++++. .+..
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~ 92 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE--AESW 92 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE--SSSE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC--CCCc
Confidence 46788887 9999999999999653 468899999865432 2467899999999999999999999994 3446
Q ss_pred EEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccccc
Q 047739 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLT 954 (1099)
Q Consensus 875 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~ 954 (1099)
++||||+++|+|.+++... ..+++..+..++.|+++||+|||+.+|+||||||+||+++.++.+||+|||+++..
T Consensus 93 ~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 167 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167 (291)
T ss_dssp EEEEECCTTEEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEEeCCCCCHHHHHHhC-----cCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence 8999999999999999753 34889999999999999999999999999999999999999999999999999865
Q ss_pred CCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhcccccccc
Q 047739 955 IPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLE 1033 (1099)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 1033 (1099)
..............++..|+|||.+.+..++.++||||+|+++|||++ |+.||......+....+.. +..... .
T Consensus 168 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~----~~~~~~-~ 242 (291)
T 1xbb_A 168 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK----GERMGC-P 242 (291)
T ss_dssp CTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT----TCCCCC-C
T ss_pred ccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc----CCCCCC-C
Confidence 332222222334557789999999988889999999999999999999 9999987666554443332 111100 0
Q ss_pred CcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcc
Q 047739 1034 PGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGC 1080 (1099)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~ 1080 (1099)
. ..+ ..+.+++.+||+.||++||++.|+++.|+++
T Consensus 243 ~--------~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 243 A--------GCP----REMYDLMNLCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp T--------TCC----HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred C--------CCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0 001 1345789999999999999999999999875
No 148
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2.7e-37 Score=344.96 Aligned_cols=259 Identities=25% Similarity=0.367 Sum_probs=203.5
Q ss_pred hccccccccccccceeEEEEEECC----ceEEEEEECCCCCc--cHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEE
Q 047739 803 RQFDEENVLSRTRYGLVFKACYND----GMVLSIRRLPDGSL--DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLL 876 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 876 (1099)
.+|...++||+|+||.||+|.+.+ +..||+|.+..... ..+.+.+|++++++++||||+++++++...+...++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 468888999999999999998643 34689999865332 346789999999999999999999997766667799
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCC
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIP 956 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 956 (1099)
||||+++|+|.+++... ...+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++....
T Consensus 105 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNE----THNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEECCTTCBHHHHHHCT----TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEeCCCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccc
Confidence 99999999999999742 34578999999999999999999999999999999999999999999999999986532
Q ss_pred CCC-CCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhccccccccC
Q 047739 957 TPA-EASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLEP 1034 (1099)
Q Consensus 957 ~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1034 (1099)
... .........+|+.|+|||.+.+..++.++||||+|+++|||++ |.+||......+....+..... ...
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~~- 253 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR------LLQ- 253 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCC------CCC-
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCC------CCC-
Confidence 211 1122345568889999999999999999999999999999999 5666665555444433322110 000
Q ss_pred cccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccC
Q 047739 1035 GLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRV 1082 (1099)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~ 1082 (1099)
+...+ ..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 254 ------~~~~~----~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 254 ------PEYCP----DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp ------CTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------CccCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 01111 124678999999999999999999999998754
No 149
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=4e-37 Score=344.34 Aligned_cols=262 Identities=21% Similarity=0.328 Sum_probs=203.8
Q ss_pred HhccccccccccccceeEEEEEE-----CCceEEEEEECCCCC--ccHHHHHHHHHHhhhccCCcceEEeeEEecCC-Cc
Q 047739 802 TRQFDEENVLSRTRYGLVFKACY-----NDGMVLSIRRLPDGS--LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAP-DL 873 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~ 873 (1099)
.++|+..+.||+|+||.||+|.+ .+++.||+|++.... ...+.+.+|++++++++||||+++++++.... ..
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 35689999999999999999985 358999999986432 23477999999999999999999999987542 44
Q ss_pred eEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccc
Q 047739 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRL 953 (1099)
Q Consensus 874 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~ 953 (1099)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+|+||||||+||+++.++.+||+|||+++.
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 175 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKA 175 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEEeCCCCcHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECccccccc
Confidence 689999999999999996532 3489999999999999999999999999999999999999999999999999987
Q ss_pred cCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCC-----------chhHHHHHHHH
Q 047739 954 TIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQ-----------DEDIVKWVKKQ 1022 (1099)
Q Consensus 954 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~-----------~~~~~~~~~~~ 1022 (1099)
...............||..|+|||++.+..++.++||||+|+++|||++|..|+.... .......+...
T Consensus 176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (302)
T 4e5w_A 176 IETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT 255 (302)
T ss_dssp CCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHH
T ss_pred ccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHH
Confidence 6433222234455678899999999999899999999999999999999999864211 01111111111
Q ss_pred hhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcc
Q 047739 1023 LQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGC 1080 (1099)
Q Consensus 1023 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~ 1080 (1099)
...+.... . +.... ..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 256 ~~~~~~~~--------~-~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 256 LKEGKRLP--------C-PPNCP----DEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp HHTTCCCC--------C-CTTCC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HhccCCCC--------C-CCCCC----HHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 11111000 0 01111 1346899999999999999999999999865
No 150
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=349.27 Aligned_cols=259 Identities=21% Similarity=0.330 Sum_probs=202.6
Q ss_pred HhccccccccccccceeEEEEEECC-ce----EEEEEECCCC--CccHHHHHHHHHHhhhccCCcceEEeeEEecCCCce
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYND-GM----VLSIRRLPDG--SLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR 874 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~-g~----~vavK~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 874 (1099)
.++|+..++||+|+||.||+|.+.. ++ +|++|.+... ....+.+.+|++++++++||||+++++++.... .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~ 91 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST--V 91 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS--E
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC--c
Confidence 3579999999999999999999753 33 4688877543 334578999999999999999999999998543 6
Q ss_pred EEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccccc
Q 047739 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLT 954 (1099)
Q Consensus 875 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~ 954 (1099)
++|+||+++|+|.+++... ...+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++..
T Consensus 92 ~~v~~~~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~ 167 (327)
T 3lzb_A 92 QLITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEEECCCSSCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred eEEEEecCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence 8999999999999999753 234899999999999999999999999999999999999999999999999999865
Q ss_pred CCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhcccccccc
Q 047739 955 IPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLE 1033 (1099)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 1033 (1099)
... ..........+|..|+|||++.+..++.++||||+|+++|||++ |+.||......+....+....... .
T Consensus 168 ~~~-~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~-----~- 240 (327)
T 3lzb_A 168 GAE-EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP-----Q- 240 (327)
T ss_dssp -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC-----C-
T ss_pred cCc-cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC-----C-
Confidence 322 12223334567889999999999999999999999999999999 999998877666554443321100 0
Q ss_pred CcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCC
Q 047739 1034 PGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGP 1084 (1099)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 1084 (1099)
+.... ..+.+++.+||+.||++||++.|+++.|+++...+
T Consensus 241 -------~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 280 (327)
T 3lzb_A 241 -------PPICT----IDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp -------CTTBC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred -------CccCC----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence 01111 12457899999999999999999999999887544
No 151
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=6.8e-37 Score=361.69 Aligned_cols=263 Identities=21% Similarity=0.240 Sum_probs=199.7
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCC---ccHHHHHHHHHHhhhccCCcceEEeeEEecCC-----C
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS---LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAP-----D 872 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~ 872 (1099)
.++|+..+.||+|+||.||+|... +|+.||+|++.... ...+.+.+|++++++++||||+++++++.... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 468999999999999999999875 58999999986432 23467889999999999999999999987432 3
Q ss_pred ceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccc
Q 047739 873 LRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR 952 (1099)
Q Consensus 873 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~ 952 (1099)
..|+||||+++ ++.+.+.. .+++..+..++.||++||+|||+.||+||||||+||+++.++.+||+|||+|+
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred eEEEEEeCCCC-CHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 46999999975 57666642 28899999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhcccc---
Q 047739 953 LTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQIT--- 1029 (1099)
Q Consensus 953 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~--- 1029 (1099)
.... .......+||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+..+....+.+........
T Consensus 213 ~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~ 288 (464)
T 3ttj_A 213 TAGT----SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 288 (464)
T ss_dssp --------CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred ecCC----CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 6521 223455789999999999999999999999999999999999999998877666555554433221000
Q ss_pred -------ccccC--ccc----------CCCCCChhHH--HHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1030 -------ELLEP--GLL----------ELDPESSEWE--EFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1030 -------~~~d~--~~~----------~~~~~~~~~~--~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
..+.. ... ...+...... .-..+.+++.+||+.||++|||++|+++.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 289 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp TSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 000 0000011111 12346789999999999999999999874
No 152
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=4.3e-37 Score=346.50 Aligned_cols=259 Identities=22% Similarity=0.354 Sum_probs=203.3
Q ss_pred ccccccccccccceeEEEEEEC-----CceEEEEEECCCCC--ccHHHHHHHHHHhhhccCCcceEEeeEEecC-CCceE
Q 047739 804 QFDEENVLSRTRYGLVFKACYN-----DGMVLSIRRLPDGS--LDENLFRKEAEFLGKVRHRNLTVLRGYYAGA-PDLRL 875 (1099)
Q Consensus 804 ~~~~~~~lg~G~~g~Vy~~~~~-----~g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~~ 875 (1099)
.|...+.||+|+||.||++.++ +++.||+|++.... ...+.+.+|++++++++||||+++++++.+. ....+
T Consensus 32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 3589999999999999999763 57899999997543 2346789999999999999999999999864 35568
Q ss_pred EEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccC
Q 047739 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTI 955 (1099)
Q Consensus 876 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 955 (1099)
+||||+++|+|.+++... .+++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++...
T Consensus 112 lv~e~~~~~~L~~~l~~~------~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp EEECCCTTCBHHHHGGGS------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred EEEecccCCcHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 999999999999999752 38999999999999999999999999999999999999999999999999998763
Q ss_pred CCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchh-----------HHHHHHHHhh
Q 047739 956 PTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDED-----------IVKWVKKQLQ 1024 (1099)
Q Consensus 956 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~-----------~~~~~~~~~~ 1024 (1099)
.............+|..|+|||++.+..++.++||||+|+++|||++|+.||....... ....+.....
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence 32222233445678889999999999899999999999999999999999986432210 0111111111
Q ss_pred hccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhccc
Q 047739 1025 KGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCR 1081 (1099)
Q Consensus 1025 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 1081 (1099)
.+... ..+.... ..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 266 ~~~~~---------~~~~~~~----~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 309 (318)
T 3lxp_A 266 RGERL---------PRPDKCP----AEVYHLMKNCWETEASFRPTFENLIPILKTVH 309 (318)
T ss_dssp TTCCC---------CCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccCC---------CCCcccc----HHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 11100 0011111 23468999999999999999999999998774
No 153
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4e-37 Score=345.23 Aligned_cols=266 Identities=21% Similarity=0.264 Sum_probs=197.1
Q ss_pred HHhccccccccccccceeEEEEEEC-CceEEEEEECCCCCcc----HHHHHHHHHHhhhccCCcceEEeeEEecCCCceE
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLD----ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 875 (1099)
..++|.+.+.||+|+||.||+|... +++.||+|.+...... .+.+.+|++++++++||||+++++++.. +...+
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-~~~~~ 110 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEI-DGQLY 110 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEee-CCeEE
Confidence 3578999999999999999999986 6899999998643222 3678899999999999999999999985 45569
Q ss_pred EEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccC
Q 047739 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTI 955 (1099)
Q Consensus 876 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 955 (1099)
+||||+++++|.+++... ..+++..+..++.|+++||+|||+.+|+||||||+||+++.++.+||+|||+++...
T Consensus 111 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 111 VDMRLINGVDLAAMLRRQ-----GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EEEECCCCEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEEEecCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 999999999999999863 248999999999999999999999999999999999999999999999999997652
Q ss_pred CCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCc
Q 047739 956 PTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPG 1035 (1099)
Q Consensus 956 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1035 (1099)
. ..........|+..|+|||.+.+..++.++||||||+++|||++|+.||...........+.. .........+.
T Consensus 186 ~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~---~~~~~~~~~~~ 260 (309)
T 2h34_A 186 D--EKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQ---AIPRPSTVRPG 260 (309)
T ss_dssp -------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHS---CCCCGGGTSTT
T ss_pred c--cccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhcc---CCCCccccCCC
Confidence 2 112233456799999999999998999999999999999999999999976544322221111 00000111111
Q ss_pred ccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCC-CHHHHHHHhhcccCCCCCCCC
Q 047739 1036 LLELDPESSEWEEFLLGVKVALLCTAPDPIDRP-TMSDIVFMLEGCRVGPDIPSS 1089 (1099)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RP-s~~evl~~L~~~~~~~~~~~~ 1089 (1099)
+. ..+.+++.+||+.||++|| +++++++.|++.....+...+
T Consensus 261 ~~------------~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~~~~ 303 (309)
T 2h34_A 261 IP------------VAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQDRA 303 (309)
T ss_dssp CC------------THHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-------
T ss_pred CC------------HHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhcccch
Confidence 10 1235789999999999999 999999999988666654443
No 154
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.7e-37 Score=346.92 Aligned_cols=273 Identities=23% Similarity=0.290 Sum_probs=204.3
Q ss_pred HHHHHhccccccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhc--cCCcceEEeeEEecCC---C
Q 047739 798 TVEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKV--RHRNLTVLRGYYAGAP---D 872 (1099)
Q Consensus 798 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l--~H~niv~l~~~~~~~~---~ 872 (1099)
.....++|++.+.||+|+||.||+|++. ++.||+|++... ....+.+|.+++... +||||+++++++.... .
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 108 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT--EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT 108 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG--GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred ccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc--ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence 3445678999999999999999999987 889999998543 334455666666554 8999999999987543 4
Q ss_pred ceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccC--------CceecCCCCCCEEECCCCcEE
Q 047739 873 LRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTS--------NMVHGDIKPQNVLFDADFEAH 944 (1099)
Q Consensus 873 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~--------~iiH~Dlk~~NIll~~~~~~k 944 (1099)
..++||||+++|+|.++++. ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 109 ~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 182 (337)
T 3mdy_A 109 QLYLITDYHENGSLYDYLKS------TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCC 182 (337)
T ss_dssp EEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred ceEEEEeccCCCcHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEE
Confidence 56999999999999999975 2489999999999999999999998 999999999999999999999
Q ss_pred EeccccccccCCCCCC-CccccccccCccccCccccccCCCCCc------CchhhHHHHHHHHHhC----------CCCC
Q 047739 945 LSDFGLDRLTIPTPAE-ASTSTTAVGTLGYVSPEAALTGETTKE------SDVYSFGIVLLELLTG----------KRPV 1007 (1099)
Q Consensus 945 l~DfGla~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~------~DV~S~G~il~elltg----------~~P~ 1007 (1099)
|+|||+++........ ........||+.|+|||++.+..++.+ +|||||||++|||++| +.||
T Consensus 183 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~ 262 (337)
T 3mdy_A 183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY 262 (337)
T ss_dssp ECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccH
Confidence 9999999765322111 122335689999999999988776665 9999999999999999 6777
Q ss_pred CCCCch-hHHHHHHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCCCC
Q 047739 1008 MFTQDE-DIVKWVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPDI 1086 (1099)
Q Consensus 1008 ~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~ 1086 (1099)
...... .....+................+ ........+.+++.+||+.||++|||+.||++.|+++....+.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~ 335 (337)
T 3mdy_A 263 HDLVPSDPSYEDMREIVCIKKLRPSFPNRW-------SSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDI 335 (337)
T ss_dssp TTTSCSSCCHHHHHHHHTTSCCCCCCCGGG-------GGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTTC
T ss_pred hhhcCCCCchhhhHHHHhhhccCccccccc-------hhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhccc
Confidence 543221 11222222222111111111111 0112223456899999999999999999999999988766543
No 155
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=4.7e-37 Score=349.81 Aligned_cols=247 Identities=26% Similarity=0.379 Sum_probs=198.2
Q ss_pred HhccccccccccccceeEEEEEE-CCceEEEEEECCCCCcc----HHHHHHHHHHhhhccCCcceEEeeEEecCCCceEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACY-NDGMVLSIRRLPDGSLD----ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLL 876 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 876 (1099)
.+.|+..+.||+|+||.||+|.. .+|+.||+|++...... .+.+.+|++++++++||||+++++++... ...++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-~~~~l 131 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE-HTAWL 131 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-TEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC-CeEEE
Confidence 45699999999999999999997 46899999998543222 25688999999999999999999999854 55699
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCC
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIP 956 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 956 (1099)
||||+. |++.+++.... ..+++..+..++.|+++||+|||+.+|+||||||+||+++.++.+||+|||+++....
T Consensus 132 v~e~~~-g~l~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 132 VMEYCL-GSASDLLEVHK----KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp EEECCS-EEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred EEecCC-CCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 999997 68888886432 3589999999999999999999999999999999999999999999999999976521
Q ss_pred CCCCCccccccccCccccCccccc---cCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhcccccccc
Q 047739 957 TPAEASTSTTAVGTLGYVSPEAAL---TGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLE 1033 (1099)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 1033 (1099)
.....||+.|+|||++. ...++.++|||||||++|||++|+.||...........+.. ........
T Consensus 207 -------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~----~~~~~~~~ 275 (348)
T 1u5q_A 207 -------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ----NESPALQS 275 (348)
T ss_dssp -------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH----SCCCCCCC
T ss_pred -------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh----cCCCCCCC
Confidence 23457999999999985 56789999999999999999999999976654443332222 11111111
Q ss_pred CcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHh
Q 047739 1034 PGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFML 1077 (1099)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L 1077 (1099)
.. .+ ..+.+++.+||+.||++|||++|+++.-
T Consensus 276 ~~--------~~----~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 276 GH--------WS----EYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp TT--------SC----HHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred CC--------CC----HHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 10 01 1235789999999999999999998653
No 156
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2e-36 Score=361.69 Aligned_cols=321 Identities=21% Similarity=0.240 Sum_probs=220.0
Q ss_pred eeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccC
Q 047739 296 LQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEG 375 (1099)
Q Consensus 296 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~ 375 (1099)
-+.++.++++++. +|..+. +++++|||++|+|++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 13 ~~~v~c~~~~l~~-ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 89 (477)
T 2id5_A 13 DRAVLCHRKRFVA-VPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89 (477)
T ss_dssp TTEEECCSCCCSS-CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-CCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCC
Confidence 3578888888884 454443 5788999999998887788888888888888888888888888888888888888888
Q ss_pred CcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccC
Q 047739 376 NRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVP 455 (1099)
Q Consensus 376 N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 455 (1099)
|++++..+..|.++++|++|+|++|++.+..+..|.++++|++|+|++|.+++..+..|.++++|+.|+|++|.+++..+
T Consensus 90 n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 169 (477)
T 2id5_A 90 NRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT 169 (477)
T ss_dssp SCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCH
T ss_pred CcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccCh
Confidence 88886555667888888888888888887777788888888888888888877777777777788888888887776666
Q ss_pred cccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhcccc
Q 047739 456 ASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMS 535 (1099)
Q Consensus 456 ~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 535 (1099)
..+.++++|+.|+|++|.+.+..+..|.++++|+.|++++|.+.+.++.......+|+.|+|++|++++..+..|..+++
T Consensus 170 ~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 249 (477)
T 2id5_A 170 EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVY 249 (477)
T ss_dssp HHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTT
T ss_pred hHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccc
Confidence 66777777777777777777666667777777777777777666555555554555666666666665443345555555
Q ss_pred cceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccCcccEEeccC
Q 047739 536 LRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSI 615 (1099)
Q Consensus 536 L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 615 (1099)
|++|+|++|.+++..+ ..|.++++|++|+|++|++++..|..+..+++|+.|+|++
T Consensus 250 L~~L~Ls~n~l~~~~~------------------------~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 305 (477)
T 2id5_A 250 LRFLNLSYNPISTIEG------------------------SMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSG 305 (477)
T ss_dssp CCEEECCSSCCCEECT------------------------TSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCS
T ss_pred cCeeECCCCcCCccCh------------------------hhccccccCCEEECCCCccceECHHHhcCcccCCEEECCC
Confidence 5555555555544333 3444444555555555555544444555555555555555
Q ss_pred ccccccCCcccCCCCCCCEEECcCcccc
Q 047739 616 NNLTGEIPDEISKCSSLRSLLVNSNHLS 643 (1099)
Q Consensus 616 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 643 (1099)
|++++..+..+..+++|+.|+|++|++.
T Consensus 306 N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 333 (477)
T 2id5_A 306 NQLTTLEESVFHSVGNLETLILDSNPLA 333 (477)
T ss_dssp SCCSCCCGGGBSCGGGCCEEECCSSCEE
T ss_pred CcCceeCHhHcCCCcccCEEEccCCCcc
Confidence 5555433334445555555555555554
No 157
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-36 Score=361.11 Aligned_cols=321 Identities=23% Similarity=0.235 Sum_probs=278.4
Q ss_pred ceEEEeccccccccCCCCCCCCCCceeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEcc
Q 047739 271 IRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMA 350 (1099)
Q Consensus 271 l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~ 350 (1099)
-+.++...+.++.+|.. ..+.+++|+|++|+|++..+..|..+++|++|+|++|.|++..|..|+++++|++|+|+
T Consensus 13 ~~~v~c~~~~l~~ip~~----~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 88 (477)
T 2id5_A 13 DRAVLCHRKRFVAVPEG----IPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLR 88 (477)
T ss_dssp TTEEECCSCCCSSCCSC----CCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcCcCCCC----CCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECC
Confidence 35788888999988763 24689999999999999989999999999999999999998889999999999999999
Q ss_pred CCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCcccc
Q 047739 351 NNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSL 430 (1099)
Q Consensus 351 ~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 430 (1099)
+|+++...+..|.++++|++|+|++|++++..|..|..+++|++|+|++|.+++..+..|.++++|++|+|++|++++..
T Consensus 89 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 168 (477)
T 2id5_A 89 SNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIP 168 (477)
T ss_dssp SSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCC
T ss_pred CCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccC
Confidence 99999877778999999999999999999888999999999999999999999999999999999999999999999877
Q ss_pred chhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCC
Q 047739 431 PEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLP 510 (1099)
Q Consensus 431 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~ 510 (1099)
+..+..+++|+.|+|++|.+++..+..|..+++|+.|++++|.+.+.++..+....+|++|++++|++++..+..+..++
T Consensus 169 ~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 248 (477)
T 2id5_A 169 TEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLV 248 (477)
T ss_dssp HHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCT
T ss_pred hhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCcc
Confidence 78899999999999999999988888999999999999999998888888777778999999999999966667899999
Q ss_pred ccceeeeccccccCCCchhhhcccccceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEec
Q 047739 511 NLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELR 590 (1099)
Q Consensus 511 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~ 590 (1099)
+|+.|+|++|.+++..+..|..+++|++|+|++|++++..|..|..+++|+.|++++|++++..+..|..+++|++|+|+
T Consensus 249 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 328 (477)
T 2id5_A 249 YLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILD 328 (477)
T ss_dssp TCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECC
T ss_pred ccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEcc
Confidence 99999999999998888888888999999988888876666666555555555555555554444444444455555555
Q ss_pred CCccc
Q 047739 591 SNSLT 595 (1099)
Q Consensus 591 ~N~l~ 595 (1099)
+|.+.
T Consensus 329 ~N~l~ 333 (477)
T 2id5_A 329 SNPLA 333 (477)
T ss_dssp SSCEE
T ss_pred CCCcc
Confidence 55444
No 158
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-36 Score=346.99 Aligned_cols=266 Identities=23% Similarity=0.307 Sum_probs=200.6
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCc---cHHHHHHHHHHhhhccCCcceEEeeEEecCC-----C
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL---DENLFRKEAEFLGKVRHRNLTVLRGYYAGAP-----D 872 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~ 872 (1099)
.++|...+.||+|+||.||+|.+. +|+.||+|++..... ..+.+.+|++++++++||||+++++++.... .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 467999999999999999999985 589999999854332 2366889999999999999999999987542 2
Q ss_pred ceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccc
Q 047739 873 LRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR 952 (1099)
Q Consensus 873 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~ 952 (1099)
..|+||||+ +++|.++++. ..+++..+..++.||++||+|||+.||+||||||+||+++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 176 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH------EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR 176 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred eEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence 359999999 7899999975 248899999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCccccccccCccccCcccccc-CCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhcc----
Q 047739 953 LTIPTPAEASTSTTAVGTLGYVSPEAALT-GETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ---- 1027 (1099)
Q Consensus 953 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~---- 1027 (1099)
.... .....+||..|+|||++.+ ..++.++||||+||+++||++|+.||.+.+..+....+........
T Consensus 177 ~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~ 250 (367)
T 1cm8_A 177 QADS------EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFV 250 (367)
T ss_dssp ECCS------SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred cccc------ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 6421 2345688999999999887 6799999999999999999999999987776655555444322110
Q ss_pred --------------ccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH--HhhcccCCCC
Q 047739 1028 --------------ITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF--MLEGCRVGPD 1085 (1099)
Q Consensus 1028 --------------~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~--~L~~~~~~~~ 1085 (1099)
+.......+....+.. -..+.+++.+|++.||++|||++|+++ .++......+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~~~~ 319 (367)
T 1cm8_A 251 QRLQSDEAKNYMKGLPELEKKDFASILTNA-----SPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTED 319 (367)
T ss_dssp HTCSCHHHHHHHHHSCCCCCCCGGGTCTTC-----CHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC----
T ss_pred HHhhhHHHHHHHHhCCCCCCCCHHHHCCCC-----CHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcCCcc
Confidence 0000011111111111 123468999999999999999999998 4555544333
No 159
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.3e-37 Score=346.64 Aligned_cols=245 Identities=20% Similarity=0.280 Sum_probs=197.0
Q ss_pred hccccccccccccceeEEEEEE-CCceEEEEEECCCCC----ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEE
Q 047739 803 RQFDEENVLSRTRYGLVFKACY-NDGMVLSIRRLPDGS----LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLV 877 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 877 (1099)
.+|.+.+.||+|+||.||+|.+ .+++.||+|.+.... ...+.+.+|++++++++||||+++++++.. +...++|
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~~~lv 87 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITT-PTDIVMV 87 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEEEE
Confidence 5799999999999999999997 468999999985321 123578999999999999999999999985 4556999
Q ss_pred EeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCC
Q 047739 878 YDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPT 957 (1099)
Q Consensus 878 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 957 (1099)
|||+ +|+|.+++... ..+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++....
T Consensus 88 ~E~~-~g~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~- 160 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEK-----KRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD- 160 (336)
T ss_dssp ECCC-CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT-
T ss_pred EECC-CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccC-
Confidence 9999 68999998753 2489999999999999999999999999999999999999999999999999986522
Q ss_pred CCCCccccccccCccccCccccccCCC-CCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcc
Q 047739 958 PAEASTSTTAVGTLGYVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGL 1036 (1099)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1036 (1099)
.......+||+.|+|||++.+..+ +.++||||+||++|||++|+.||.......... .+....
T Consensus 161 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~-------------~i~~~~ 224 (336)
T 3h4j_B 161 ---GNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK-------------KVNSCV 224 (336)
T ss_dssp ---SBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC-------------CCCSSC
T ss_pred ---CcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH-------------HHHcCC
Confidence 223345689999999999988776 689999999999999999999997543322111 111111
Q ss_pred cCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1037 LELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
...+.. .. ..+.+++.+||+.||.+|||++|+++.
T Consensus 225 ~~~p~~-~s----~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 225 YVMPDF-LS----PGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CCCCTT-SC----HHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred CCCccc-CC----HHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 111111 11 124578999999999999999999874
No 160
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.5e-37 Score=345.71 Aligned_cols=261 Identities=22% Similarity=0.324 Sum_probs=198.3
Q ss_pred HhccccccccccccceeEEEEEEC--Cc--eEEEEEECCCCC----ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCc
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN--DG--MVLSIRRLPDGS----LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~--~g--~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 873 (1099)
.++|++.+.||+|+||.||+|.+. ++ ..||+|.+.... ...+.+.+|++++++++||||+++++++....
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 94 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-- 94 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC--
Confidence 467999999999999999999863 23 468999886432 23467899999999999999999999998543
Q ss_pred eEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccc
Q 047739 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRL 953 (1099)
Q Consensus 874 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~ 953 (1099)
.++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+.+|+||||||+||+++.++.+||+|||+++.
T Consensus 95 ~~~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 95 MKMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp CEEEEECCTTCBHHHHHHHHG----GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred ceeeEecccCCCHHHHHHhcc----CCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEcccccccc
Confidence 589999999999999997632 3488999999999999999999999999999999999999999999999999986
Q ss_pred cCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhccccccc
Q 047739 954 TIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELL 1032 (1099)
Q Consensus 954 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1099)
...............+|..|+|||++.+..++.++||||+|+++|||++ |+.||......+....+... .. ....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~---~~-~~~~ 246 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE---GE-RLPR 246 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTS---CC-CCCC
T ss_pred ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHcc---CC-CCCC
Confidence 5333222223345568889999999998889999999999999999999 99999877665544433221 10 0000
Q ss_pred cCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCC
Q 047739 1033 EPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGP 1084 (1099)
Q Consensus 1033 d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 1084 (1099)
. ...+ ..+.+++.+||+.||++|||+.++++.|+++.+..
T Consensus 247 ~--------~~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 247 P--------EDCP----QDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp C--------TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred C--------cCcC----HHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 0 0011 13457899999999999999999999999876543
No 161
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.6e-37 Score=342.43 Aligned_cols=259 Identities=24% Similarity=0.334 Sum_probs=204.2
Q ss_pred ccccccccccccceeEEEEEECC----ceEEEEEECCCCCc--cHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEE
Q 047739 804 QFDEENVLSRTRYGLVFKACYND----GMVLSIRRLPDGSL--DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLV 877 (1099)
Q Consensus 804 ~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 877 (1099)
.|...++||+|+||.||+|.+.+ +..||+|.+..... ..+.+.+|++++++++||||+++++++.......++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 45667899999999999998632 34799999865333 2367889999999999999999999998666656899
Q ss_pred EeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCC
Q 047739 878 YDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPT 957 (1099)
Q Consensus 878 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 957 (1099)
|||+.+|+|.+++... ...+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++.....
T Consensus 102 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSP----QRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp ECCCTTCBHHHHHHCT----TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred EecccCCCHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 9999999999999752 345889999999999999999999999999999999999999999999999999754221
Q ss_pred CC-CCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCC-CCCCCchhHHHHHHHHhhhccccccccCc
Q 047739 958 PA-EASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP-VMFTQDEDIVKWVKKQLQKGQITELLEPG 1035 (1099)
Q Consensus 958 ~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1035 (1099)
.. .........+|..|+|||.+.+..++.++||||+|+++|||++|..| |......+....+..... ... .
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~~----~-- 250 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRR-LPQ----P-- 250 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCC-CCC----C--
T ss_pred cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCC-CCC----C--
Confidence 11 12233456788999999999999999999999999999999995555 444444444433332211 000 0
Q ss_pred ccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCC
Q 047739 1036 LLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVG 1083 (1099)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 1083 (1099)
.... ..+.+++.+||+.||.+|||+.|+++.|+++...
T Consensus 251 ------~~~~----~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 288 (298)
T 3pls_A 251 ------EYCP----DSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288 (298)
T ss_dssp ------TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ------ccch----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0001 1345789999999999999999999999987543
No 162
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=5.7e-37 Score=341.94 Aligned_cols=269 Identities=16% Similarity=0.199 Sum_probs=207.0
Q ss_pred HHHhccccccccccccceeEEEEEE-CCceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEE
Q 047739 800 EATRQFDEENVLSRTRYGLVFKACY-NDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVY 878 (1099)
Q Consensus 800 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 878 (1099)
...++|+..+.||+|+||.||+|.. .+++.||+|.+.... ..+.+.+|++++++++|++++..++++.......++||
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc-cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 3457899999999999999999997 568999999864432 23458899999999999998888888766777789999
Q ss_pred eecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEE---CCCCcEEEeccccccccC
Q 047739 879 DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLF---DADFEAHLSDFGLDRLTI 955 (1099)
Q Consensus 879 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll---~~~~~~kl~DfGla~~~~ 955 (1099)
||+ +|+|.+++... ...+++..+..++.|++.||+|||+.+|+||||||+||++ +.++.+||+|||+++...
T Consensus 85 e~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp ECC-CCBHHHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred Ecc-CCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 999 89999999753 2348999999999999999999999999999999999999 788999999999998653
Q ss_pred CCCCCC----ccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCch---hHHHHHHHHhhhccc
Q 047739 956 PTPAEA----STSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDE---DIVKWVKKQLQKGQI 1028 (1099)
Q Consensus 956 ~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~---~~~~~~~~~~~~~~~ 1028 (1099)
...... .......||..|+|||.+.+..++.++||||+||++|||++|+.||...... .....+.........
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 239 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh
Confidence 322111 2234568999999999999999999999999999999999999999764332 222222222111111
Q ss_pred cccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCCCCC
Q 047739 1029 TELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPDIP 1087 (1099)
Q Consensus 1029 ~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 1087 (1099)
. .....+. ..+.+++.+||+.||++|||+.||++.|+++.......
T Consensus 240 ~-~~~~~~~------------~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~ 285 (296)
T 4hgt_A 240 E-VLCKGYP------------SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS 285 (296)
T ss_dssp H-HHTTTSC------------HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCC
T ss_pred h-hhhccCC------------HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 0 0001110 13468899999999999999999999999876544433
No 163
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1e-36 Score=346.35 Aligned_cols=251 Identities=20% Similarity=0.322 Sum_probs=198.4
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCC----ccHHHHHHHHHHhhhc-cCCcceEEeeEEecCCCceE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS----LDENLFRKEAEFLGKV-RHRNLTVLRGYYAGAPDLRL 875 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~ 875 (1099)
.++|+..+.||+|+||.||+|+.+ +++.||+|.+.... ...+.+.+|.++++++ +||||+++++++.+ ....|
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~-~~~~~ 86 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-ESRLF 86 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEe-CCEEE
Confidence 357999999999999999999986 58999999986432 1235688999999988 89999999999985 45679
Q ss_pred EEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccC
Q 047739 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTI 955 (1099)
Q Consensus 876 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 955 (1099)
+||||+++|+|.+++.+. ..+++..+..++.||+.||+|||+.||+||||||+||+++.++.+||+|||+++...
T Consensus 87 lv~e~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 87 FVIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp EEECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 999999999999999753 248999999999999999999999999999999999999999999999999998532
Q ss_pred CCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCch-----hHHHHHHHHhhhccccc
Q 047739 956 PTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDE-----DIVKWVKKQLQKGQITE 1030 (1099)
Q Consensus 956 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~-----~~~~~~~~~~~~~~~~~ 1030 (1099)
. ........+||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.+.+......
T Consensus 162 ~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~- 237 (345)
T 3a8x_A 162 R---PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR- 237 (345)
T ss_dssp C---TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC-
T ss_pred C---CCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC-
Confidence 1 122345568999999999999999999999999999999999999999642211 1111222222222110
Q ss_pred cccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCH------HHHHH
Q 047739 1031 LLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTM------SDIVF 1075 (1099)
Q Consensus 1031 ~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~------~evl~ 1075 (1099)
+.. . .. ..+.+++.+||+.||++||++ .|+++
T Consensus 238 -~p~-------~-~s----~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~ 275 (345)
T 3a8x_A 238 -IPR-------S-LS----VKAASVLKSFLNKDPKERLGCHPQTGFADIQG 275 (345)
T ss_dssp -CCT-------T-SC----HHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred -CCC-------C-CC----HHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence 011 1 11 124578999999999999995 56654
No 164
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.3e-36 Score=349.15 Aligned_cols=265 Identities=19% Similarity=0.243 Sum_probs=207.3
Q ss_pred HHHhccccccccccccceeEEEEEEC-CceEEEEEECCCCCccHHHHHHHHHHhhhcc-----CCcceEEeeEEecCCCc
Q 047739 800 EATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFRKEAEFLGKVR-----HRNLTVLRGYYAGAPDL 873 (1099)
Q Consensus 800 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~-----H~niv~l~~~~~~~~~~ 873 (1099)
...++|.+.++||+|+||.||+|.+. +++.||+|++.......+.+..|++++++++ ||||+++++++... +.
T Consensus 32 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~-~~ 110 (360)
T 3llt_A 32 LLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYY-DH 110 (360)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEET-TE
T ss_pred EecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeEC-Ce
Confidence 34678999999999999999999984 5889999999765555677889999999996 99999999999854 55
Q ss_pred eEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECC--------------
Q 047739 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDA-------------- 939 (1099)
Q Consensus 874 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~-------------- 939 (1099)
.++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+.||+||||||+||+++.
T Consensus 111 ~~lv~e~~-~~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~ 186 (360)
T 3llt_A 111 MCLIFEPL-GPSLYEIITRNN---YNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVT 186 (360)
T ss_dssp EEEEECCC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTT
T ss_pred eEEEEcCC-CCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhccc
Confidence 69999999 899999998532 234899999999999999999999999999999999999975
Q ss_pred -----------CCcEEEeccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCC
Q 047739 940 -----------DFEAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVM 1008 (1099)
Q Consensus 940 -----------~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~ 1008 (1099)
++.+||+|||+|+.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.
T Consensus 187 ~~~~~~~~~~~~~~~kl~DFG~a~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 260 (360)
T 3llt_A 187 DGKKIQIYRTKSTGIKLIDFGCATFKSD------YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR 260 (360)
T ss_dssp TCCEEEEEEESCCCEEECCCTTCEETTS------CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred ccccccccccCCCCEEEEeccCceecCC------CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCC
Confidence 78999999999985421 2235679999999999999999999999999999999999999998
Q ss_pred CCCchhHHHHHHHHhhhcc-----------ccccccCc-cc-CCCCCChhHHH---------------HHHHHHHHHhcC
Q 047739 1009 FTQDEDIVKWVKKQLQKGQ-----------ITELLEPG-LL-ELDPESSEWEE---------------FLLGVKVALLCT 1060 (1099)
Q Consensus 1009 ~~~~~~~~~~~~~~~~~~~-----------~~~~~d~~-~~-~~~~~~~~~~~---------------~~~~~~li~~Cl 1060 (1099)
.....+....+........ ....++.. .. ........... -..+.+++.+||
T Consensus 261 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L 340 (360)
T 3llt_A 261 THEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSIL 340 (360)
T ss_dssp CSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHC
T ss_pred CCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHh
Confidence 7766655554443321100 00000000 00 00000000000 033568999999
Q ss_pred CCCCCCCCCHHHHHH
Q 047739 1061 APDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1061 ~~dP~~RPs~~evl~ 1075 (1099)
+.||++|||++|+++
T Consensus 341 ~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 341 QIDPTLRPSPAELLK 355 (360)
T ss_dssp CSSGGGSCCHHHHTT
T ss_pred cCChhhCCCHHHHhc
Confidence 999999999999975
No 165
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=9.6e-37 Score=343.07 Aligned_cols=264 Identities=19% Similarity=0.291 Sum_probs=201.4
Q ss_pred HHHhccccccccccccceeEEEEEEC----CceEEEEEECCCCCcc---HHHHHHHHHHhhhccCCcceEEeeEEecCCC
Q 047739 800 EATRQFDEENVLSRTRYGLVFKACYN----DGMVLSIRRLPDGSLD---ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPD 872 (1099)
Q Consensus 800 ~~~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 872 (1099)
...++|...+.||+|+||.||+|.+. .+..||+|.+...... .+.+.+|++++++++||||+++++++.....
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 35678999999999999999999864 3568999998654332 3568899999999999999999999875432
Q ss_pred ----ceEEEEeecCCCCHHHHHhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEec
Q 047739 873 ----LRLLVYDYMPNGNLGTLLQEASH-QDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSD 947 (1099)
Q Consensus 873 ----~~~lV~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~D 947 (1099)
..++||||+++|+|.+++..... .....+++..++.++.|+++||+|||+.+|+||||||+||+++.++.+||+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~D 190 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVAD 190 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECS
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEee
Confidence 34899999999999999964322 2345689999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhc
Q 047739 948 FGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKG 1026 (1099)
Q Consensus 948 fGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~ 1026 (1099)
||+++...... .........+++.|+|||.+.+..++.++||||||+++|||++ |..||...........+.....
T Consensus 191 fg~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~-- 267 (313)
T 3brb_A 191 FGLSKKIYSGD-YYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHR-- 267 (313)
T ss_dssp CSCC-----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCC--
T ss_pred cCcceeccccc-ccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCC--
Confidence 99997652211 1122344567889999999999999999999999999999999 8999987766665554432211
Q ss_pred cccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhccc
Q 047739 1027 QITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCR 1081 (1099)
Q Consensus 1027 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 1081 (1099)
... .+ ... ..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 268 --~~~-~~--------~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~ 307 (313)
T 3brb_A 268 --LKQ-PE--------DCL----DELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307 (313)
T ss_dssp --CCC-BT--------TCC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CCC-Cc--------ccc----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 000 00 001 13467899999999999999999999998764
No 166
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.5e-36 Score=336.53 Aligned_cols=252 Identities=24% Similarity=0.321 Sum_probs=197.5
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCC--CccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDG--SLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVY 878 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 878 (1099)
.++|...+.||+|+||.||+|... ++..||+|.+... ....+.+.+|++++++++||||+++++++.+ ....++||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~ 99 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFED-YHNMYIVM 99 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheec-CCeEEEEE
Confidence 468999999999999999999985 5889999988543 2345789999999999999999999999984 45569999
Q ss_pred eecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEE---CCCCcEEEeccccccccC
Q 047739 879 DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLF---DADFEAHLSDFGLDRLTI 955 (1099)
Q Consensus 879 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll---~~~~~~kl~DfGla~~~~ 955 (1099)
||+++|+|.+++..... ....+++..+..++.|+++||+|||+.||+||||||+||++ +.++.+||+|||+++...
T Consensus 100 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 100 ETCEGGELLERIVSAQA-RGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CCCSCCBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred EeCCCCcHHHHHHhhhh-cccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 99999999999975422 23458999999999999999999999999999999999999 456889999999997652
Q ss_pred CCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCc
Q 047739 956 PTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPG 1035 (1099)
Q Consensus 956 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1035 (1099)
. ........||..|+|||.+. +.++.++||||+|+++|||++|+.||......+....+.... .... ..
T Consensus 179 ~----~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~--~~~~--~~-- 247 (285)
T 3is5_A 179 S----DEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKE--PNYA--VE-- 247 (285)
T ss_dssp ------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCC--C---
T ss_pred C----cccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCC--cccc--cc--
Confidence 2 22334567999999999875 578999999999999999999999998766555443332211 0000 00
Q ss_pred ccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1036 LLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
..+.. ..+.+++.+||+.||++|||+.|+++
T Consensus 248 ---~~~~~------~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 248 ---CRPLT------PQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ----CCCC------HHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ---cCcCC------HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00001 12457899999999999999999986
No 167
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=8.8e-37 Score=342.91 Aligned_cols=268 Identities=19% Similarity=0.290 Sum_probs=198.3
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCC----ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS----LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLL 876 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 876 (1099)
..+|.+.+.||+|+||.||+|... +|..||+|++.... ...+.+.+|++++++++||||+++++++... ...++
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~l 109 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED-NELNI 109 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET-TEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC-CcEEE
Confidence 457999999999999999999974 68999999986422 2346688999999999999999999999854 45699
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCC
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIP 956 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 956 (1099)
||||+++|+|.+++..... ....+++..++.++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++....
T Consensus 110 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp EEECCCSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred EEecCCCCCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 9999999999999976432 234589999999999999999999999999999999999999999999999999876422
Q ss_pred CCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcc
Q 047739 957 TPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGL 1036 (1099)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1036 (1099)
.........|+..|+|||++.+..++.++||||||+++|||++|+.||....... .. +...+...........
T Consensus 189 ---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~-~~~~~~~~~~~~~~~~-- 261 (310)
T 2wqm_A 189 ---KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-YS-LCKKIEQCDYPPLPSD-- 261 (310)
T ss_dssp -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCH-HH-HHHHHHTTCSCCCCTT--
T ss_pred ---CCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhH-HH-HHHHhhcccCCCCccc--
Confidence 1122334578999999999999999999999999999999999999997543221 11 1122222221111111
Q ss_pred cCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCCCCCC
Q 047739 1037 LELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPDIPS 1088 (1099)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 1088 (1099)
... ..+.+++.+||+.||++|||+.||++.|+++.+....+.
T Consensus 262 ------~~~----~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~ 303 (310)
T 2wqm_A 262 ------HYS----EELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSL 303 (310)
T ss_dssp ------TSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC---
T ss_pred ------ccC----HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhh
Confidence 011 124578999999999999999999999999876655543
No 168
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=6.5e-37 Score=339.27 Aligned_cols=255 Identities=24% Similarity=0.405 Sum_probs=204.2
Q ss_pred HHhccccccccccccceeEEEEEEC-CceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEec----------
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAG---------- 869 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~---------- 869 (1099)
...+|+..+.||+|+||.||+|.+. +++.||+|.+.... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 4568999999999999999999986 68999999986532 467899999999999999999998753
Q ss_pred -----CCCceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEE
Q 047739 870 -----APDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAH 944 (1099)
Q Consensus 870 -----~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~k 944 (1099)
.....++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.||+||||||+||+++.++.+|
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRR---GEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEE
Confidence 1234589999999999999997532 24589999999999999999999999999999999999999999999
Q ss_pred EeccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhh
Q 047739 945 LSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQ 1024 (1099)
Q Consensus 945 l~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~ 1024 (1099)
|+|||+++..... .......||+.|+|||.+.+..++.++||||||+++|||++|..|+... . .......
T Consensus 163 l~Dfg~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-----~-~~~~~~~ 232 (284)
T 2a19_B 163 IGDFGLVTSLKND----GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-----S-KFFTDLR 232 (284)
T ss_dssp ECCCTTCEESSCC----SCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-----H-HHHHHHH
T ss_pred ECcchhheecccc----ccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-----H-HHHHHhh
Confidence 9999999765321 2234457999999999999999999999999999999999999886421 1 1111122
Q ss_pred hccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCCCCC
Q 047739 1025 KGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPDIP 1087 (1099)
Q Consensus 1025 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 1087 (1099)
.+.+...++ ..+.+++.+||+.||++||++.|+++.|+.+...+...
T Consensus 233 ~~~~~~~~~----------------~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~ 279 (284)
T 2a19_B 233 DGIISDIFD----------------KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKN 279 (284)
T ss_dssp TTCCCTTSC----------------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-----
T ss_pred cccccccCC----------------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCcc
Confidence 221111111 12357899999999999999999999999887766543
No 169
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=3.4e-37 Score=377.26 Aligned_cols=248 Identities=21% Similarity=0.292 Sum_probs=197.5
Q ss_pred cccccccceeEEEEEEC---CceEEEEEECCCCCc---cHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEeecC
Q 047739 809 NVLSRTRYGLVFKACYN---DGMVLSIRRLPDGSL---DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYMP 882 (1099)
Q Consensus 809 ~~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e~~~ 882 (1099)
+.||+|+||.||+|.+. .+..||||++..... ..+.+.+|++++++++|||||++++++.. +..++||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA--ESWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES--SSEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec--CCEEEEEEccC
Confidence 47999999999999763 468899999975433 24779999999999999999999999973 33689999999
Q ss_pred CCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCCCCCc
Q 047739 883 NGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTPAEAS 962 (1099)
Q Consensus 883 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 962 (1099)
+|+|.++++.. ..+++..+..|+.||+.||+|||+.+|+||||||+||+++.++.+||+|||+|+..........
T Consensus 453 ~g~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 527 (635)
T 4fl3_A 453 LGPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527 (635)
T ss_dssp TEEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------
T ss_pred CCCHHHHHhhC-----CCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccc
Confidence 99999999752 3489999999999999999999999999999999999999999999999999986633322223
Q ss_pred cccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhccccccccCcccCCCC
Q 047739 963 TSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLELDP 1041 (1099)
Q Consensus 963 ~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 1041 (1099)
......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+....+..... ... .
T Consensus 528 ~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~----~~~-p-------- 594 (635)
T 4fl3_A 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER----MGC-P-------- 594 (635)
T ss_dssp -------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC----CCC-C--------
T ss_pred cccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC----CCC-C--------
Confidence 3344567889999999999999999999999999999998 9999987776655544433211 100 0
Q ss_pred CChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcc
Q 047739 1042 ESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGC 1080 (1099)
Q Consensus 1042 ~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~ 1080 (1099)
...+ ..+.+++.+||+.||++||++.+|++.|+++
T Consensus 595 ~~~~----~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 595 AGCP----REMYDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp TTCC----HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCCC----HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 1111 1345789999999999999999999999864
No 170
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=2.9e-37 Score=350.64 Aligned_cols=262 Identities=22% Similarity=0.304 Sum_probs=207.1
Q ss_pred HhccccccccccccceeEEEEEECC------ceEEEEEECCCCCc--cHHHHHHHHHHhhhc-cCCcceEEeeEEecCCC
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYND------GMVLSIRRLPDGSL--DENLFRKEAEFLGKV-RHRNLTVLRGYYAGAPD 872 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 872 (1099)
.++|...+.||+|+||.||+|.+.. +..||+|.+..... ..+.+.+|+++++++ +||||+++++++... .
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-~ 123 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG-G 123 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-S
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC-C
Confidence 5689999999999999999999753 24799999865432 346789999999999 899999999999854 4
Q ss_pred ceEEEEeecCCCCHHHHHhhhccC---------CCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcE
Q 047739 873 LRLLVYDYMPNGNLGTLLQEASHQ---------DGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEA 943 (1099)
Q Consensus 873 ~~~lV~e~~~~gsL~~~l~~~~~~---------~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~ 943 (1099)
..++||||+++|+|.+++...... ....+++..+..++.|++.||+|||+.||+||||||+||+++.++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~ 203 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA 203 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEE
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeE
Confidence 569999999999999999764311 12457999999999999999999999999999999999999999999
Q ss_pred EEeccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHH
Q 047739 944 HLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQ 1022 (1099)
Q Consensus 944 kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~ 1022 (1099)
||+|||+++..... ..........||+.|+|||++.+..++.++||||||+++|||++ |..||...........+...
T Consensus 204 kl~Dfg~~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~ 282 (333)
T 2i1m_A 204 KIGDFGLARDIMND-SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD 282 (333)
T ss_dssp EBCCCGGGCCGGGC-TTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHH
T ss_pred EECccccccccccc-cceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhc
Confidence 99999999865322 12223344567889999999999999999999999999999999 99999765544333322221
Q ss_pred hhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhccc
Q 047739 1023 LQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCR 1081 (1099)
Q Consensus 1023 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 1081 (1099)
..... . +...+ ..+.+++.+||+.||.+|||+.|+++.|+++.
T Consensus 283 ~~~~~-----~-------~~~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 283 GYQMA-----Q-------PAFAP----KNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp TCCCC-----C-------CTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCC-----C-------CCCCC----HHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 11100 0 01111 13457899999999999999999999998754
No 171
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=7.5e-37 Score=340.24 Aligned_cols=265 Identities=20% Similarity=0.307 Sum_probs=198.9
Q ss_pred hccccccccccccceeEEEEEEC-CceEEEEEECCCCCc---cHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEE
Q 047739 803 RQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL---DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVY 878 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 878 (1099)
++|+..+.||+|+||.||+|... +|+.||+|++..... ..+.+.+|++++++++||||+++++++.+. ...++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~lv~ 80 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD-KKLTLVF 80 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEET-TEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeC-CEEEEEE
Confidence 47899999999999999999986 588999999854332 236788999999999999999999999854 5569999
Q ss_pred eecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCC
Q 047739 879 DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTP 958 (1099)
Q Consensus 879 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 958 (1099)
||+++ ++.+++... ...+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~~-~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~-- 153 (292)
T 3o0g_A 81 EFCDQ-DLKKYFDSC----NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGI-- 153 (292)
T ss_dssp ECCSE-EHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCS--
T ss_pred ecCCC-CHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCC--
Confidence 99975 676666542 24589999999999999999999999999999999999999999999999999986521
Q ss_pred CCCccccccccCccccCccccccCC-CCCcCchhhHHHHHHHHHhCCCCCC-CCCchhHHHHHHHHhhhccccccc---c
Q 047739 959 AEASTSTTAVGTLGYVSPEAALTGE-TTKESDVYSFGIVLLELLTGKRPVM-FTQDEDIVKWVKKQLQKGQITELL---E 1033 (1099)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~S~G~il~elltg~~P~~-~~~~~~~~~~~~~~~~~~~~~~~~---d 1033 (1099)
.........||..|+|||++.+.. ++.++||||+||++|||++|..||. .....+....+............. .
T Consensus 154 -~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 232 (292)
T 3o0g_A 154 -PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTK 232 (292)
T ss_dssp -CCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGG
T ss_pred -ccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcc
Confidence 223334568899999999998766 7999999999999999999888854 444444444444332221110000 0
Q ss_pred -CcccCC--CCCC-----hhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1034 -PGLLEL--DPES-----SEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1034 -~~~~~~--~~~~-----~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
+..... .+.. .....-..+.+++.+|++.||++|||++|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp STTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000000 0000 000001234589999999999999999999873
No 172
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.8e-37 Score=343.17 Aligned_cols=245 Identities=22% Similarity=0.234 Sum_probs=190.3
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCcc---HHHHHHHHHHhhhc-cCCcceEEeeEEecCCCceEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLD---ENLFRKEAEFLGKV-RHRNLTVLRGYYAGAPDLRLL 876 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~l 876 (1099)
.++|+..++||+|+||+||+|.+. +|+.||||++...... ...+.+|+..+.++ +||||+++++++.+ ....++
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~-~~~~~l 134 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE-GGILYL 134 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe-CCEEEE
Confidence 468999999999999999999987 6899999998543322 23455666666655 89999999999985 455699
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCC
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIP 956 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 956 (1099)
||||+ +|+|.+++.... ..+++..+..++.|++.||+|||+.+|+||||||+||+++.++.+||+|||+++....
T Consensus 135 v~e~~-~~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~ 209 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWG----ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT 209 (311)
T ss_dssp EEECC-CCBHHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred EEecc-CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence 99999 679999987642 4589999999999999999999999999999999999999999999999999876522
Q ss_pred CCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcc
Q 047739 957 TPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGL 1036 (1099)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1036 (1099)
........||+.|+|||++.+ .++.++|||||||++|||++|..|+.... .... +..+..........
T Consensus 210 ----~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~---~~~~----~~~~~~~~~~~~~~ 277 (311)
T 3p1a_A 210 ----AGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE---GWQQ----LRQGYLPPEFTAGL 277 (311)
T ss_dssp ---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH---HHHH----HTTTCCCHHHHTTS
T ss_pred ----CCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc---HHHH----HhccCCCcccccCC
Confidence 223345579999999998875 78999999999999999999977664321 1111 11111111111111
Q ss_pred cCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1037 LELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
-..+.+++.+||+.||++|||++|+++.
T Consensus 278 ------------~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 278 ------------SSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp ------------CHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ------------CHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 0234689999999999999999999863
No 173
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=7.4e-37 Score=360.45 Aligned_cols=249 Identities=22% Similarity=0.306 Sum_probs=204.2
Q ss_pred hccccccccccccceeEEEEEEC-CceEEEEEECCCCC----ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEE
Q 047739 803 RQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS----LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLV 877 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 877 (1099)
.+|.+.+.||+|+||.||+|.+. +|+.||+|.+.... ...+.+.+|++++++++||||+++++++.. +...++|
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~-~~~~~lv 94 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST-PSDIFMV 94 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEE
Confidence 57899999999999999999986 68999999985432 123578899999999999999999999985 4567999
Q ss_pred EeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCC
Q 047739 878 YDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPT 957 (1099)
Q Consensus 878 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 957 (1099)
|||+++|+|.+++.+. ..+++..+..++.||+.||+|||+.||+||||||+||+++.++.+||+|||+++....
T Consensus 95 ~E~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~- 168 (476)
T 2y94_A 95 MEYVSGGELFDYICKN-----GRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD- 168 (476)
T ss_dssp EECCSSEEHHHHTTSS-----SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCT-
T ss_pred EeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhccc-
Confidence 9999999999999742 3489999999999999999999999999999999999999999999999999986522
Q ss_pred CCCCccccccccCccccCccccccCCC-CCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcc
Q 047739 958 PAEASTSTTAVGTLGYVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGL 1036 (1099)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1036 (1099)
.......+||+.|+|||++.+..+ +.++||||+||++|||++|+.||...........+... ... . +
T Consensus 169 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~----~~~--~-p-- 236 (476)
T 2y94_A 169 ---GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDG----IFY--T-P-- 236 (476)
T ss_dssp ---TCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTT----CCC--C-C--
T ss_pred ---cccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC----CcC--C-C--
Confidence 223345689999999999988765 68999999999999999999999876665554443321 110 0 0
Q ss_pred cCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH--Hhhc
Q 047739 1037 LELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF--MLEG 1079 (1099)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~--~L~~ 1079 (1099)
.... ..+.+++.+||+.||++|||+.||++ .+.+
T Consensus 237 -----~~~s----~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~ 272 (476)
T 2y94_A 237 -----QYLN----PSVISLLKHMLQVDPMKRATIKDIREHEWFKQ 272 (476)
T ss_dssp -----TTCC----HHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHT
T ss_pred -----ccCC----HHHHHHHHHHcCCCchhCcCHHHHHhCHHhhh
Confidence 0001 12457899999999999999999997 4543
No 174
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2e-36 Score=341.62 Aligned_cols=252 Identities=19% Similarity=0.268 Sum_probs=204.3
Q ss_pred HHhccccccccccccceeEEEEEEC-CceEEEEEECCCCCc-------cHHHHHHHHHHhhhccCCcceEEeeEEecCCC
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL-------DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPD 872 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 872 (1099)
..++|++.+.||+|+||.||+|... +|..||+|.+..... ..+.+.+|++++++++||||+++++++.+ ..
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~ 88 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN-RT 88 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SS
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEec-CC
Confidence 3567999999999999999999986 588999998854321 35779999999999999999999999985 45
Q ss_pred ceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCC----cEEEecc
Q 047739 873 LRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADF----EAHLSDF 948 (1099)
Q Consensus 873 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~----~~kl~Df 948 (1099)
..++||||+++|+|.+++... ..+++..+..++.|+++||+|||+.||+||||||+||+++.++ .+||+||
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 89 DVVLILELVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp EEEEEECCCCSCBHHHHHHTC-----SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccC
Confidence 569999999999999999742 3489999999999999999999999999999999999999887 7999999
Q ss_pred ccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccc
Q 047739 949 GLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQI 1028 (1099)
Q Consensus 949 Gla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 1028 (1099)
|+++.... ........||+.|+|||++.+..++.++||||+|+++|||++|+.||......+....+..... ..
T Consensus 164 g~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~--~~ 237 (321)
T 2a2a_A 164 GLAHEIED----GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSY--DF 237 (321)
T ss_dssp TTCEECCT----TCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCC--CC
T ss_pred ccceecCc----cccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhccc--cc
Confidence 99986522 1223456799999999999999999999999999999999999999987665554443322110 00
Q ss_pred cccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1029 TELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1029 ~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
........ -..+.+++.+||+.||++|||+.|+++.
T Consensus 238 ~~~~~~~~------------~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 238 DEEFFSHT------------SELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp CHHHHTTC------------CHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred Chhhhccc------------CHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000000 0134689999999999999999999874
No 175
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.9e-37 Score=357.65 Aligned_cols=275 Identities=20% Similarity=0.211 Sum_probs=207.9
Q ss_pred hccccccccccccceeEEEEEECC-ceEEEEEECCCCC--ccHHHHHHHHHHhhhccCCcceEEeeEEecCC-CceEEEE
Q 047739 803 RQFDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGS--LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAP-DLRLLVY 878 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~~lV~ 878 (1099)
++|.+.++||+|+||.||+|.+.. |+.||+|++.... ...+.+.+|++++++++||||+++++++.... ...++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 578999999999999999999864 8999999986433 23467889999999999999999999987543 3568999
Q ss_pred eecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEE----CCCCcEEEecccccccc
Q 047739 879 DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLF----DADFEAHLSDFGLDRLT 954 (1099)
Q Consensus 879 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll----~~~~~~kl~DfGla~~~ 954 (1099)
||+++|+|.+++..... ...+++..++.++.|++.||+|||+.||+||||||+||++ +.++.+||+|||+++..
T Consensus 89 e~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~ 166 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (396)
T ss_dssp CCCTTEEHHHHTTSGGG--TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEEC
T ss_pred ecCCCCCHHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEc
Confidence 99999999999986322 2348999999999999999999999999999999999999 78888999999999865
Q ss_pred CCCCCCCccccccccCccccCcccccc--------CCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhc
Q 047739 955 IPTPAEASTSTTAVGTLGYVSPEAALT--------GETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKG 1026 (1099)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 1026 (1099)
.. ........||..|+|||++.+ ..++.++|||||||++|||++|+.||...........+...+..+
T Consensus 167 ~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 242 (396)
T 4eut_A 167 ED----DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (396)
T ss_dssp CC----GGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHS
T ss_pred cC----CCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcC
Confidence 22 223345679999999998865 467889999999999999999999996533222111111112211
Q ss_pred cccccc-------cCc--cc-CCCC-CChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCC
Q 047739 1027 QITELL-------EPG--LL-ELDP-ESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVG 1083 (1099)
Q Consensus 1027 ~~~~~~-------d~~--~~-~~~~-~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 1083 (1099)
...... ... +. .... .......-..+.+++.+||+.||++||++.|+++.++++...
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 111000 000 00 0011 111122233456899999999999999999999999876543
No 176
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=4.6e-37 Score=352.14 Aligned_cols=244 Identities=25% Similarity=0.369 Sum_probs=192.3
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCc----cHHHHHHHHHH-hhhccCCcceEEeeEEecCCCceE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL----DENLFRKEAEF-LGKVRHRNLTVLRGYYAGAPDLRL 875 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~~ 875 (1099)
.++|+..++||+|+||.||+|+.+ +++.||+|++..... ..+.+.+|..+ ++.++||||+++++++.+ .+..|
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~-~~~~~ 115 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT-ADKLY 115 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEEC-SSEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEe-CCEEE
Confidence 467999999999999999999986 478999999854322 23456677776 577899999999999985 45679
Q ss_pred EEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccC
Q 047739 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTI 955 (1099)
Q Consensus 876 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 955 (1099)
+||||+++|+|.+++.+. ..+++.....++.||+.||+|||+.||+||||||+||+++.++.+||+|||+++...
T Consensus 116 lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQRE-----RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred EEEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence 999999999999999863 247889999999999999999999999999999999999999999999999998532
Q ss_pred CCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCc
Q 047739 956 PTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPG 1035 (1099)
Q Consensus 956 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1035 (1099)
. ........+||+.|+|||++.+..++.++||||+||++|||++|+.||......+..+.+... .. .+.+.
T Consensus 191 ~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~----~~--~~~~~ 261 (373)
T 2r5t_A 191 E---HNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK----PL--QLKPN 261 (373)
T ss_dssp C---CCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHS----CC--CCCSS
T ss_pred c---CCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc----cc--CCCCC
Confidence 1 122345678999999999999999999999999999999999999999877665555544332 11 01111
Q ss_pred ccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHH
Q 047739 1036 LLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSD 1072 (1099)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~e 1072 (1099)
+ . ..+.+++.+||+.||++||++.+
T Consensus 262 ~--------~----~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 262 I--------T----NSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp S--------C----HHHHHHHHHHTCSSGGGSTTTTT
T ss_pred C--------C----HHHHHHHHHHcccCHHhCCCCCC
Confidence 1 1 12457899999999999999854
No 177
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=9e-37 Score=360.48 Aligned_cols=247 Identities=21% Similarity=0.307 Sum_probs=194.9
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCC----CccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDG----SLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLL 876 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 876 (1099)
.++|+..++||+|+||.||+|... +|+.||+|.+... ......+.+|++++++++||||+++++++... +..++
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~-~~~~l 225 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH-DRLCF 225 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEET-TEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeC-CEEEE
Confidence 467999999999999999999975 5899999998532 22335678899999999999999999999854 45699
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHcc-CCceecCCCCCCEEECCCCcEEEeccccccccC
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHT-SNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTI 955 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 955 (1099)
||||+++|+|.+++... ..+++..+..++.||++||+|||+ .||+||||||+||+++.++.+||+|||+|+...
T Consensus 226 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300 (446)
T ss_dssp EECCCSSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred EEeeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence 99999999999999753 348999999999999999999998 999999999999999999999999999997532
Q ss_pred CCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCc
Q 047739 956 PTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPG 1035 (1099)
Q Consensus 956 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1035 (1099)
.........+||+.|+|||++.+..++.++||||+||++|||++|+.||...........+.... ...+ .
T Consensus 301 ---~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~--~~~p----~- 370 (446)
T 4ejn_A 301 ---KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE--IRFP----R- 370 (446)
T ss_dssp ---C-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCC----T-
T ss_pred ---CCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCC--CCCC----c-
Confidence 12233455789999999999999999999999999999999999999998776665555443321 0111 0
Q ss_pred ccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHH
Q 047739 1036 LLELDPESSEWEEFLLGVKVALLCTAPDPIDRP-----TMSDIVF 1075 (1099)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RP-----s~~evl~ 1075 (1099)
. .. ..+.+++.+||+.||++|| +++|+++
T Consensus 371 ------~-~~----~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 371 ------T-LG----PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp ------T-SC----HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ------c-CC----HHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 0 01 1245899999999999999 9999986
No 178
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=8.3e-37 Score=337.51 Aligned_cols=246 Identities=24% Similarity=0.390 Sum_probs=199.5
Q ss_pred HhccccccccccccceeEEEEEECC-ceEEEEEECCCCCc----cHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSL----DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLL 876 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 876 (1099)
.++|++.+.||+|+||.||+|.+.. +..||+|.+..... ..+.+.+|++++++++||||+++++++.+. ...++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~l 86 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TRVYL 86 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS-SEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecC-CEEEE
Confidence 4689999999999999999998764 67899999854221 245688999999999999999999999854 55699
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCC
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIP 956 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 956 (1099)
||||+++|+|.+++... ..+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++....
T Consensus 87 v~e~~~~~~l~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~- 160 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP- 160 (279)
T ss_dssp EECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred EEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCC-
Confidence 99999999999999764 238899999999999999999999999999999999999999999999999986432
Q ss_pred CCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcc
Q 047739 957 TPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGL 1036 (1099)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1036 (1099)
........||..|+|||.+.+..++.++||||+|+++|||++|+.||......+....+.... ......
T Consensus 161 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~----- 229 (279)
T 3fdn_A 161 ----SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE--FTFPDF----- 229 (279)
T ss_dssp -----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC--CCCCTT-----
T ss_pred ----cccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCC--CCCCCc-----
Confidence 122344679999999999999999999999999999999999999998766555444433210 000000
Q ss_pred cCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1037 LELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
.. ..+.+++.+||+.||++|||+.|+++.
T Consensus 230 -------~~----~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 230 -------VT----EGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp -------SC----HHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred -------CC----HHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00 123578999999999999999999974
No 179
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.4e-36 Score=336.72 Aligned_cols=251 Identities=20% Similarity=0.303 Sum_probs=203.3
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCc---cHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL---DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLV 877 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 877 (1099)
.++|++.+.||+|+||.||+|... +|..||+|.+..... ..+.+.+|++++++++||||+++++++.. +...++|
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v 83 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-ESFHYLV 83 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEc-CCEEEEE
Confidence 467999999999999999999986 488999999854332 23668899999999999999999999984 4556999
Q ss_pred EeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCc---EEEecccccccc
Q 047739 878 YDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFE---AHLSDFGLDRLT 954 (1099)
Q Consensus 878 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~---~kl~DfGla~~~ 954 (1099)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+.||+||||||+||+++.++. +||+|||++...
T Consensus 84 ~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~ 158 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158 (284)
T ss_dssp ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEc
Confidence 9999999999998753 34899999999999999999999999999999999999986655 999999999765
Q ss_pred CCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccC
Q 047739 955 IPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEP 1034 (1099)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1034 (1099)
.. ........||+.|+|||.+.+..++.++||||+|+++|||++|+.||...........+...... ...+
T Consensus 159 ~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~-----~~~~ 229 (284)
T 3kk8_A 159 ND----SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD-----YPSP 229 (284)
T ss_dssp CS----SCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC-----CCTT
T ss_pred cc----CccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhcccc-----CCch
Confidence 22 22334567999999999999999999999999999999999999999877665555444332111 1111
Q ss_pred cccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1035 GLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
.+.. .. ..+.+++.+||+.||++|||+.|+++.
T Consensus 230 ~~~~-----~~----~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 230 EWDT-----VT----PEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp TTTT-----SC----HHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhcc-----cC----HHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 1100 01 124578999999999999999999873
No 180
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8.3e-37 Score=336.74 Aligned_cols=244 Identities=18% Similarity=0.296 Sum_probs=179.3
Q ss_pred hccccccccccccceeEEEEEEC-CceEEEEEECCCCCc----cHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEE
Q 047739 803 RQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL----DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLV 877 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 877 (1099)
++|++.+.||+|+||.||+|.+. +|+.||+|.+..... ..+.+.+|++++++++||||+++++++.+. ...++|
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~lv 91 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSK-DEIIMV 91 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECS-SCEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecC-CeEEEE
Confidence 47999999999999999999864 689999999865322 246789999999999999999999999854 456999
Q ss_pred EeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCC
Q 047739 878 YDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPT 957 (1099)
Q Consensus 878 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 957 (1099)
|||+ ++++.+++... ..+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++....
T Consensus 92 ~e~~-~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~- 164 (275)
T 2eue_A 92 IEYA-GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD- 164 (275)
T ss_dssp EECC-CEEHHHHHHTS-----SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC------
T ss_pred ehhc-CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEeecccceeccC-
Confidence 9999 67888888642 3489999999999999999999999999999999999999999999999999975422
Q ss_pred CCCCccccccccCccccCccccccCCC-CCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcc
Q 047739 958 PAEASTSTTAVGTLGYVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGL 1036 (1099)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1036 (1099)
........||..|+|||.+.+..+ +.++||||+|+++|||++|+.||...........+..... .....
T Consensus 165 ---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~----- 234 (275)
T 2eue_A 165 ---GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY--TLPKF----- 234 (275)
T ss_dssp -------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CCCTT-----
T ss_pred ---cccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCcc-----
Confidence 222344579999999999987765 7899999999999999999999987665554443332211 11100
Q ss_pred cCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1037 LELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
.. ..+.+++.+||+.||++|||+.|+++
T Consensus 235 -------~~----~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 235 -------LS----PGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -------SC----HHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -------CC----HHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 01 12457899999999999999999975
No 181
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.6e-36 Score=334.90 Aligned_cols=250 Identities=24% Similarity=0.279 Sum_probs=202.1
Q ss_pred HHhccccccccccccceeEEEEEECC-ceEEEEEECCCC-CccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEE
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDG-SLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVY 878 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 878 (1099)
..++|.+.+.||+|+||.||+|.... +..||+|++... ....+.+.+|++++++++||||+++++++.+ ....++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~ 85 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFED-NTDIYLVM 85 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCeEEEEE
Confidence 45689999999999999999999864 678999988543 3345789999999999999999999999984 45569999
Q ss_pred eecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEE---CCCCcEEEeccccccccC
Q 047739 879 DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLF---DADFEAHLSDFGLDRLTI 955 (1099)
Q Consensus 879 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll---~~~~~~kl~DfGla~~~~ 955 (1099)
||+++++|.+++... ..+++..+..++.|++.||+|||+.||+||||||+||++ +.++.+||+|||++....
T Consensus 86 e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~ 160 (277)
T 3f3z_A 86 ELCTGGELFERVVHK-----RVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160 (277)
T ss_dssp ECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred eccCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence 999999999998753 338999999999999999999999999999999999999 788999999999997652
Q ss_pred CCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCc
Q 047739 956 PTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPG 1035 (1099)
Q Consensus 956 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1035 (1099)
. ........||+.|+|||.+.+ .++.++||||+|+++|||++|+.||......+....+..... .........
T Consensus 161 ~----~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 233 (277)
T 3f3z_A 161 P----GKMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTF--TFPEKDWLN 233 (277)
T ss_dssp T----TSCBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC--CCCHHHHTT
T ss_pred C----ccchhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC--CCCchhhhc
Confidence 2 223345679999999998765 489999999999999999999999987666554444333211 000000000
Q ss_pred ccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1036 LLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
. -..+.+++.+|++.||++||++.|+++
T Consensus 234 ~------------~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 234 V------------SPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp S------------CHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred C------------CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 023457899999999999999999985
No 182
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=3.5e-37 Score=348.89 Aligned_cols=267 Identities=22% Similarity=0.369 Sum_probs=207.3
Q ss_pred HhccccccccccccceeEEEEEEC------CceEEEEEECCCCC--ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCc
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN------DGMVLSIRRLPDGS--LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 873 (1099)
.++|.+.+.||+|+||.||+|.+. ++..||+|.+.... .....+.+|+.++++++||||+++++++.... .
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~ 107 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL-P 107 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-S
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC-C
Confidence 468999999999999999999842 46789999996432 33467889999999999999999999998544 4
Q ss_pred eEEEEeecCCCCHHHHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECC---CCcEEEecc
Q 047739 874 RLLVYDYMPNGNLGTLLQEASHQ--DGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDA---DFEAHLSDF 948 (1099)
Q Consensus 874 ~~lV~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~---~~~~kl~Df 948 (1099)
.++||||+++|+|.+++...... ....+++..++.++.|+++||+|||+.||+||||||+||+++. +..+||+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Df 187 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 187 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECcc
Confidence 59999999999999999864322 2245899999999999999999999999999999999999984 446999999
Q ss_pred ccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhcc
Q 047739 949 GLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQ 1027 (1099)
Q Consensus 949 Gla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~ 1027 (1099)
|+++..... ..........||..|+|||++.+..++.++||||||+++|||++ |+.||......+....+... .
T Consensus 188 g~~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~----~ 262 (327)
T 2yfx_A 188 GMARDIYRA-SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG----G 262 (327)
T ss_dssp HHHHHHHC-------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT----C
T ss_pred ccccccccc-cccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcC----C
Confidence 998754211 11223345678999999999998999999999999999999998 99999876655544433321 1
Q ss_pred ccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCCCCC
Q 047739 1028 ITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPDIP 1087 (1099)
Q Consensus 1028 ~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 1087 (1099)
... .. ...+ ..+.+++.+||+.||++||++.|+++.|+.+...++..
T Consensus 263 ~~~-~~--------~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~~~ 309 (327)
T 2yfx_A 263 RMD-PP--------KNCP----GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 309 (327)
T ss_dssp CCC-CC--------TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHHH
T ss_pred CCC-CC--------CCCC----HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHHHh
Confidence 100 00 0011 12457899999999999999999999999887665543
No 183
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.8e-37 Score=349.45 Aligned_cols=263 Identities=24% Similarity=0.266 Sum_probs=201.3
Q ss_pred HHHHHhccccccccccccceeEEEEEEC-CceEEEEEECCCC------CccHHHHHHHHHHhhhccCCcceEEeeEEecC
Q 047739 798 TVEATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDG------SLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870 (1099)
Q Consensus 798 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 870 (1099)
+....++|.+.+.||+|+||.||+|... ++..||+|.+... ....+.+.+|++++++++||||+++++++.+
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~- 99 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED- 99 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc-
Confidence 3567789999999999999999999985 5789999988432 2344779999999999999999999999985
Q ss_pred CCceEEEEeecCCCCHHHHHhhhccC-----------------------------------CCCCCCHHHHHHHHHHHHH
Q 047739 871 PDLRLLVYDYMPNGNLGTLLQEASHQ-----------------------------------DGHVLNWPMRHLIALGVAR 915 (1099)
Q Consensus 871 ~~~~~lV~e~~~~gsL~~~l~~~~~~-----------------------------------~~~~l~~~~~~~i~~~ia~ 915 (1099)
....++||||+++|+|.+++...... ....+++..+..++.|+++
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 45679999999999999999632111 0122457778889999999
Q ss_pred HHHHHccCCceecCCCCCCEEECCCC--cEEEeccccccccCCCC-CCCccccccccCccccCcccccc--CCCCCcCch
Q 047739 916 GLAFLHTSNMVHGDIKPQNVLFDADF--EAHLSDFGLDRLTIPTP-AEASTSTTAVGTLGYVSPEAALT--GETTKESDV 990 (1099)
Q Consensus 916 ~L~~LH~~~iiH~Dlk~~NIll~~~~--~~kl~DfGla~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DV 990 (1099)
||+|||+.+|+||||||+||+++.++ .+||+|||+++...... ..........||+.|+|||.+.+ ..++.++||
T Consensus 180 ~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di 259 (345)
T 3hko_A 180 ALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDA 259 (345)
T ss_dssp HHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHH
T ss_pred HHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHH
Confidence 99999999999999999999998766 89999999998542221 12223456679999999999875 678999999
Q ss_pred hhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCH
Q 047739 991 YSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTM 1070 (1099)
Q Consensus 991 ~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~ 1070 (1099)
||+|+++|||++|+.||......+....+....... ..+..... -..+.+++.+||+.||++||++
T Consensus 260 wslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-----~~~~~~~~---------~~~~~~li~~~l~~~p~~Rps~ 325 (345)
T 3hko_A 260 WSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCF-----ENPNYNVL---------SPLARDLLSNLLNRNVDERFDA 325 (345)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCT-----TSGGGGGS---------CHHHHHHHHHHSCSCTTTSCCH
T ss_pred HHHHHHHHHHHHCCCCCCCCChHHHHHHHHhccccc-----CCcccccC---------CHHHHHHHHHHcCCChhHCCCH
Confidence 999999999999999998776655444433321100 00110000 0134578999999999999999
Q ss_pred HHHHH
Q 047739 1071 SDIVF 1075 (1099)
Q Consensus 1071 ~evl~ 1075 (1099)
.|+++
T Consensus 326 ~~~l~ 330 (345)
T 3hko_A 326 MRALQ 330 (345)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99987
No 184
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=7.5e-37 Score=354.90 Aligned_cols=210 Identities=21% Similarity=0.259 Sum_probs=176.9
Q ss_pred Hhccccccccccc--cceeEEEEEEC-CceEEEEEECCCCCcc---HHHHHHHHHHhhhccCCcceEEeeEEecCCCceE
Q 047739 802 TRQFDEENVLSRT--RYGLVFKACYN-DGMVLSIRRLPDGSLD---ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875 (1099)
Q Consensus 802 ~~~~~~~~~lg~G--~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 875 (1099)
..+|++.++||+| +||.||+|+.. +|+.||+|++...... .+.+.+|++++++++|||||++++++... ...+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~ 102 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD-NELW 102 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-TEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEEC-CEEE
Confidence 4579999999999 99999999987 6899999998643322 35688899999999999999999999854 4569
Q ss_pred EEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccC
Q 047739 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTI 955 (1099)
Q Consensus 876 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 955 (1099)
+||||+++|+|.+++... ....+++..+..++.||++||+|||+.+|+||||||+||+++.++.+||+|||.+....
T Consensus 103 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~ 179 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTH---FMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMI 179 (389)
T ss_dssp EEEECCTTCBHHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred EEEEccCCCCHHHHHhhh---cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence 999999999999999753 22348999999999999999999999999999999999999999999999999886432
Q ss_pred CCC----CCCccccccccCccccCcccccc--CCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhH
Q 047739 956 PTP----AEASTSTTAVGTLGYVSPEAALT--GETTKESDVYSFGIVLLELLTGKRPVMFTQDEDI 1015 (1099)
Q Consensus 956 ~~~----~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~ 1015 (1099)
... .........+||..|+|||++.+ ..++.++||||+||++|||++|+.||......+.
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~ 245 (389)
T 3gni_B 180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM 245 (389)
T ss_dssp ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH
T ss_pred cccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence 111 11122234579999999999987 5799999999999999999999999976555443
No 185
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.2e-37 Score=348.55 Aligned_cols=251 Identities=21% Similarity=0.310 Sum_probs=191.8
Q ss_pred HhccccccccccccceeEEEEEECCceEEEEEECCCCCcc---HHHHHHHHHHhhhccC--CcceEEeeEEecCCCceEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLD---ENLFRKEAEFLGKVRH--RNLTVLRGYYAGAPDLRLL 876 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~~l 876 (1099)
.++|++.+.||+|+||.||+|...+++.||+|++...... .+.+.+|++++++++| |||+++++++.. +...++
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~-~~~~~l 86 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-DQYIYM 86 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEee-CCEEEE
Confidence 4579999999999999999999988999999998644333 3668899999999986 999999999984 456799
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCC
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIP 956 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 956 (1099)
|||+ .+|+|.+++... ..+++..+..++.|+++||+|||+.+|+||||||+||+++ ++.+||+|||+++....
T Consensus 87 v~e~-~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~ 159 (343)
T 3dbq_A 87 VMEC-GNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 159 (343)
T ss_dssp EECC-CSEEHHHHHHHS-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred EEeC-CCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence 9995 578999999853 3488999999999999999999999999999999999997 57899999999986532
Q ss_pred CCCCCccccccccCccccCcccccc-----------CCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhh
Q 047739 957 TPAEASTSTTAVGTLGYVSPEAALT-----------GETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQK 1025 (1099)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~ 1025 (1099)
. .........+||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ...+......
T Consensus 160 ~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~~~~~~ 236 (343)
T 3dbq_A 160 D-TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ--ISKLHAIIDP 236 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH--HHHHHHHHCT
T ss_pred c-cccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH--HHHHHHHhcC
Confidence 2 11223345689999999999865 67889999999999999999999999754332 1111111111
Q ss_pred ccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1026 GQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1026 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
.. .... . .... ..+.+++.+||+.||++|||+.|+++.
T Consensus 237 ~~-~~~~-------~-~~~~----~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 237 NH-EIEF-------P-DIPE----KDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp TS-CCCC-------C-CCSC----HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred Cc-ccCC-------c-ccCC----HHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 10 0000 0 1111 124578999999999999999999865
No 186
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=3.6e-37 Score=340.42 Aligned_cols=261 Identities=21% Similarity=0.311 Sum_probs=207.9
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCc---cHHHHHHHHHHhhhccCCcceEEeeEEec-CCCceEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL---DENLFRKEAEFLGKVRHRNLTVLRGYYAG-APDLRLL 876 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~~l 876 (1099)
.++|+..+.||+|+||.||+|... +++.||+|.+..... ..+.+.+|++++++++||||+++++++.+ .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 468999999999999999999986 589999999865432 34668899999999999999999998753 3456799
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCC-----ceecCCCCCCEEECCCCcEEEeccccc
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSN-----MVHGDIKPQNVLFDADFEAHLSDFGLD 951 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-----iiH~Dlk~~NIll~~~~~~kl~DfGla 951 (1099)
||||+++|+|.+++..... ....+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 85 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~ 163 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163 (279)
T ss_dssp EEECCTTEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred EEeCCCCCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence 9999999999999986432 3345899999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhcccccc
Q 047739 952 RLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITEL 1031 (1099)
Q Consensus 952 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1099)
+.... .........||..|+|||.+.+..++.++||||+|+++|||++|+.||......+....+.. +.....
T Consensus 164 ~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~----~~~~~~ 236 (279)
T 2w5a_A 164 RILNH---DTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE----GKFRRI 236 (279)
T ss_dssp HHC------CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH----TCCCCC
T ss_pred eeecc---ccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhh----cccccC
Confidence 76421 11223345789999999999998999999999999999999999999987665554444333 211111
Q ss_pred ccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCC
Q 047739 1032 LEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVG 1083 (1099)
Q Consensus 1032 ~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 1083 (1099)
... .+ ..+.+++.+||+.||++||++.|+++.+....+.
T Consensus 237 -~~~--------~~----~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~ 275 (279)
T 2w5a_A 237 -PYR--------YS----DELNEIITRMLNLKDYHRPSVEEILENPLILEHH 275 (279)
T ss_dssp -CTT--------SC----HHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred -Ccc--------cC----HHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhc
Confidence 110 01 1345789999999999999999999987654433
No 187
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=4.2e-37 Score=347.03 Aligned_cols=272 Identities=22% Similarity=0.327 Sum_probs=198.8
Q ss_pred HhccccccccccccceeEEEEEECCceEEEEEECCCCCc---cHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSL---DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVY 878 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 878 (1099)
.++|+..+.||+|+||.||+|.+++. ||+|.+..... ..+.+.+|++++++++||||+++++++.+.. ..++||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~~--~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~iv~ 108 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHGE--VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP-HLAIIT 108 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESSS--EEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS-CEEEEC
T ss_pred HHHeEEeeEeccCCceEEEEEEEcCe--EEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC-ceEEEe
Confidence 46799999999999999999998753 88888854322 2356889999999999999999999998554 469999
Q ss_pred eecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCC
Q 047739 879 DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTP 958 (1099)
Q Consensus 879 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 958 (1099)
||+++++|.+++... ...+++..+..++.|+++||+|||+.||+||||||+||+++ ++.+||+|||+++......
T Consensus 109 e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~ 183 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDA----KIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQ 183 (319)
T ss_dssp BCCCSEEHHHHTTSS----CCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC------
T ss_pred ecccCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCcccccccc
Confidence 999999999999742 24588999999999999999999999999999999999998 6799999999987542111
Q ss_pred --CCCccccccccCccccCcccccc---------CCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhcc
Q 047739 959 --AEASTSTTAVGTLGYVSPEAALT---------GETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027 (1099)
Q Consensus 959 --~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 1027 (1099)
..........||..|+|||.+.+ ..++.++||||||+++|||++|+.||...........+.. +.
T Consensus 184 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~----~~ 259 (319)
T 2y4i_B 184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGT----GM 259 (319)
T ss_dssp ----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHT----TC
T ss_pred ccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcc----CC
Confidence 11223345569999999998864 3578899999999999999999999987665544433322 11
Q ss_pred ccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCCCCCCCCCCCCCCC
Q 047739 1028 ITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPDIPSSADPTTQPS 1097 (1099)
Q Consensus 1028 ~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~ 1097 (1099)
......... . ..+.+++.+||+.||++|||+.|+++.|+++.......+.....++++
T Consensus 260 ~~~~~~~~~---~---------~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~~~~~~~~~~~~ 317 (319)
T 2y4i_B 260 KPNLSQIGM---G---------KEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSHPGHFWKSA 317 (319)
T ss_dssp CCCCCCSSC---C---------TTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----------------
T ss_pred CCCCCcCCC---C---------HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhccCCCCccccccc
Confidence 111111111 0 013578999999999999999999999999988776666555555554
No 188
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.9e-36 Score=337.82 Aligned_cols=264 Identities=23% Similarity=0.329 Sum_probs=198.8
Q ss_pred hccccccccccccceeEEEEEECC-ceEEEEEECCCCCcc---HHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEE
Q 047739 803 RQFDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLD---ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVY 878 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 878 (1099)
++|+..+.||+|+||.||+|.+.. |+.||+|++...... .+.+.+|++++++++||||+++++++.. ....++||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~ 81 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRR-KRRLHLVF 81 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeec-CCeEEEEE
Confidence 579999999999999999999864 899999988654433 3568899999999999999999999985 45569999
Q ss_pred eecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCC
Q 047739 879 DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTP 958 (1099)
Q Consensus 879 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 958 (1099)
||+++++|.+++... ..+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++....
T Consensus 82 e~~~~~~l~~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-- 154 (311)
T 4agu_A 82 EYCDHTVLHELDRYQ-----RGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTG-- 154 (311)
T ss_dssp ECCSEEHHHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EeCCCchHHHHHhhh-----cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccC--
Confidence 999999998887642 3489999999999999999999999999999999999999999999999999976521
Q ss_pred CCCccccccccCccccCcccccc-CCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccc--------c
Q 047739 959 AEASTSTTAVGTLGYVSPEAALT-GETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQI--------T 1029 (1099)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~--------~ 1029 (1099)
.........||..|+|||.+.+ ..++.++||||+|+++|||++|+.||......+....+......... .
T Consensus 155 -~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (311)
T 4agu_A 155 -PSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTN 233 (311)
T ss_dssp ------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTC
T ss_pred -cccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccc
Confidence 1223345679999999999876 56899999999999999999999999887766655554443221100 0
Q ss_pred cccc-CcccCCCCCChhHH-----HHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1030 ELLE-PGLLELDPESSEWE-----EFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1030 ~~~d-~~~~~~~~~~~~~~-----~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
.... ....... .....+ .-..+.+++.+||+.||++|||++|+++.
T Consensus 234 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 234 QYFSGVKIPDPE-DMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GGGTTCCCCCCS-SCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccccCcCCCcc-ccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000 0000000 000000 01124689999999999999999999864
No 189
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.6e-36 Score=342.84 Aligned_cols=269 Identities=20% Similarity=0.299 Sum_probs=199.8
Q ss_pred hccccccccccccceeEEEEEEC-CceEEEEEECCCCCccH--HHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEe
Q 047739 803 RQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDE--NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYD 879 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~--~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e 879 (1099)
++|...+.||+|+||.||+|... +++.||+|++....... ..+.+|++++++++||||+++++++... ...++|||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~lv~e 80 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTE-KSLTLVFE 80 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECS-SCEEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeC-CEEEEEec
Confidence 47899999999999999999986 68899999986433222 2456899999999999999999999854 45699999
Q ss_pred ecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCCC
Q 047739 880 YMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTPA 959 (1099)
Q Consensus 880 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 959 (1099)
|++ |+|.+++... ...+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~--- 152 (324)
T 3mtl_A 81 YLD-KDLKQYLDDC----GNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSI--- 152 (324)
T ss_dssp CCS-EEHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC-----
T ss_pred ccc-cCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccC---
Confidence 997 5999998753 24589999999999999999999999999999999999999999999999999975421
Q ss_pred CCccccccccCccccCcccccc-CCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccc---cccC-
Q 047739 960 EASTSTTAVGTLGYVSPEAALT-GETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITE---LLEP- 1034 (1099)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~---~~d~- 1034 (1099)
.........||..|+|||++.+ ..++.++||||+||++|||++|+.||......+....+........... ....
T Consensus 153 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 232 (324)
T 3mtl_A 153 PTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE 232 (324)
T ss_dssp ----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCH
T ss_pred CccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcch
Confidence 1223345678999999999876 5689999999999999999999999988777776666655433221100 0000
Q ss_pred -----cccCCCCCChhH---HHHHHHHHHHHhcCCCCCCCCCCHHHHHH--Hhhcc
Q 047739 1035 -----GLLELDPESSEW---EEFLLGVKVALLCTAPDPIDRPTMSDIVF--MLEGC 1080 (1099)
Q Consensus 1035 -----~~~~~~~~~~~~---~~~~~~~~li~~Cl~~dP~~RPs~~evl~--~L~~~ 1080 (1099)
.+.......... ..-..+.+++.+||+.||++|||++|+++ .+...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 288 (324)
T 3mtl_A 233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSL 288 (324)
T ss_dssp HHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGG
T ss_pred hhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhc
Confidence 000000000000 00123468999999999999999999987 44444
No 190
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=5.8e-36 Score=343.57 Aligned_cols=255 Identities=24% Similarity=0.379 Sum_probs=203.9
Q ss_pred HHHHHHhccccccccccccceeEEEEEEC-CceEEEEEECCCCCcc---------HHHHHHHHHHhhhc-cCCcceEEee
Q 047739 797 ETVEATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLD---------ENLFRKEAEFLGKV-RHRNLTVLRG 865 (1099)
Q Consensus 797 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---------~~~~~~E~~~l~~l-~H~niv~l~~ 865 (1099)
......++|.+.+.||+|+||.||+|.+. +|+.||||++...... .+.+.+|+.+++++ +||||+++++
T Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 33455678999999999999999999986 6899999988543211 35678999999999 7999999999
Q ss_pred EEecCCCceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEE
Q 047739 866 YYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHL 945 (1099)
Q Consensus 866 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl 945 (1099)
++.. ....++||||+++|+|.+++... ..+++..+..++.||+.||+|||+.||+||||||+||+++.++.+||
T Consensus 168 ~~~~-~~~~~lv~e~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl 241 (365)
T 2y7j_A 168 SYES-SSFMFLVFDLMRKGELFDYLTEK-----VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRL 241 (365)
T ss_dssp EEEB-SSEEEEEECCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEE
T ss_pred EEee-CCEEEEEEEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEE
Confidence 9985 45679999999999999999753 34899999999999999999999999999999999999999999999
Q ss_pred eccccccccCCCCCCCccccccccCccccCcccccc------CCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHH
Q 047739 946 SDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALT------GETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWV 1019 (1099)
Q Consensus 946 ~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~ 1019 (1099)
+|||++..... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+
T Consensus 242 ~DfG~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i 317 (365)
T 2y7j_A 242 SDFGFSCHLEP----GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMI 317 (365)
T ss_dssp CCCTTCEECCT----TCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred EecCcccccCC----CcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 99999976532 123345689999999998863 35889999999999999999999999876655444433
Q ss_pred HHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1020 KKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1020 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
... ... ...+.+.. . -..+.+++.+||+.||++|||+.|+++
T Consensus 318 ~~~----~~~-~~~~~~~~---~------~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 318 MEG----QYQ-FSSPEWDD---R------SSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HHT----CCC-CCHHHHSS---S------CHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HhC----CCC-CCCccccc---C------CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 321 110 00000000 0 012457999999999999999999987
No 191
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.2e-36 Score=353.14 Aligned_cols=254 Identities=21% Similarity=0.310 Sum_probs=189.9
Q ss_pred Hhccccc-cccccccceeEEEEEEC-CceEEEEEECCCCCccHHHHHHHHHHhhh-ccCCcceEEeeEEec---CCCceE
Q 047739 802 TRQFDEE-NVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFRKEAEFLGK-VRHRNLTVLRGYYAG---APDLRL 875 (1099)
Q Consensus 802 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~---~~~~~~ 875 (1099)
.++|... ++||+|+||.||+|... +|+.||+|++.. ...+.+|++++.+ .+||||+++++++.. +....|
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 3466665 78999999999999986 588999999853 3467889988755 489999999998863 244568
Q ss_pred EEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECC---CCcEEEecccccc
Q 047739 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDA---DFEAHLSDFGLDR 952 (1099)
Q Consensus 876 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~---~~~~kl~DfGla~ 952 (1099)
+||||+++|+|.+++... ....+++..+..++.||+.||+|||+.||+||||||+||+++. ++.+||+|||+++
T Consensus 136 lv~E~~~gg~L~~~l~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDR---GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp EEEECCCSEEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEeCCCCcHHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEeccccc
Confidence 999999999999999752 2345899999999999999999999999999999999999987 7899999999998
Q ss_pred ccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccc
Q 047739 953 LTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELL 1032 (1099)
Q Consensus 953 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1099)
.... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||...............+..+... ..
T Consensus 213 ~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~-~~ 287 (400)
T 1nxk_A 213 ETTS----HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE-FP 287 (400)
T ss_dssp ECC---------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCC-CC
T ss_pred ccCC----CCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCccc-CC
Confidence 6421 223345689999999999999999999999999999999999999997654322111111111111110 01
Q ss_pred cCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1033 EPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1033 d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
.+.+.. .. ..+.+++.+||+.||++|||+.|+++.
T Consensus 288 ~~~~~~-----~s----~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 288 NPEWSE-----VS----EEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp TTTTTT-----SC----HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred Cccccc-----CC----HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 111100 01 124579999999999999999999974
No 192
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.6e-36 Score=361.84 Aligned_cols=252 Identities=22% Similarity=0.293 Sum_probs=202.3
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCC----CccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDG----SLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLL 876 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 876 (1099)
.++|+..++||+|+||.||+|... +|+.||+|++... ....+.+.+|++++++++||||+++++++.+ ....|+
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-~~~l~l 261 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET-KDALCL 261 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEee-CCEEEE
Confidence 457999999999999999999986 6899999998532 2234668899999999999999999999985 456799
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCC
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIP 956 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 956 (1099)
||||+++|+|.+++.... ...+++..+..++.||+.||+|||+.||+||||||+||+++.++.+||+|||+|+....
T Consensus 262 VmEy~~gg~L~~~l~~~~---~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMG---QAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp EECCCCSCBHHHHHHSSS---SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEcCCCCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 999999999999997532 23489999999999999999999999999999999999999999999999999986522
Q ss_pred CCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcc
Q 047739 957 TPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGL 1036 (1099)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1036 (1099)
.......+||+.|+|||++.+..++.++||||+||++|||++|+.||...........+...+..... .+...+
T Consensus 339 ----~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~--~~p~~~ 412 (576)
T 2acx_A 339 ----GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPE--EYSERF 412 (576)
T ss_dssp ----TCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCC--CCCTTS
T ss_pred ----CccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccc--cCCccC
Confidence 12234568999999999999989999999999999999999999999765432222222222221110 011111
Q ss_pred cCCCCCChhHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHH
Q 047739 1037 LELDPESSEWEEFLLGVKVALLCTAPDPIDRP-----TMSDIVF 1075 (1099)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RP-----s~~evl~ 1075 (1099)
. ..+.+++.+||+.||++|| +++||++
T Consensus 413 --------s----~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 413 --------S----PQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp --------C----HHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred --------C----HHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 0 1345789999999999999 7888875
No 193
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=5.7e-37 Score=348.67 Aligned_cols=268 Identities=22% Similarity=0.290 Sum_probs=194.2
Q ss_pred HhccccccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHH--hhhccCCcceEEeeEEec----CCCceE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEF--LGKVRHRNLTVLRGYYAG----APDLRL 875 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~--l~~l~H~niv~l~~~~~~----~~~~~~ 875 (1099)
.++|.+.+.||+|+||.||+|++ +++.||+|++.... ...+..|.++ +..++||||+++++++.. .....+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 88 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN--RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL 88 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence 46799999999999999999987 58899999986433 3344444444 556899999999976532 233458
Q ss_pred EEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccC---------CceecCCCCCCEEECCCCcEEEe
Q 047739 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTS---------NMVHGDIKPQNVLFDADFEAHLS 946 (1099)
Q Consensus 876 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~---------~iiH~Dlk~~NIll~~~~~~kl~ 946 (1099)
+||||+++|+|.+++... ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 89 lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 89 LVMEYYPNGSLXKYLSLH------TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred EEEecCCCCcHHHHHhhc------ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEe
Confidence 999999999999999752 258899999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCC-----CCCccccccccCccccCcccccc-------CCCCCcCchhhHHHHHHHHHhCCCCCCCCCch-
Q 047739 947 DFGLDRLTIPTP-----AEASTSTTAVGTLGYVSPEAALT-------GETTKESDVYSFGIVLLELLTGKRPVMFTQDE- 1013 (1099)
Q Consensus 947 DfGla~~~~~~~-----~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DV~S~G~il~elltg~~P~~~~~~~- 1013 (1099)
|||+++...... ..........||..|+|||++.+ ..++.++|||||||++|||++|..||......
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 999998653221 11222335679999999999876 34667899999999999999998776432211
Q ss_pred hH-------------HHHHHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcc
Q 047739 1014 DI-------------VKWVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGC 1080 (1099)
Q Consensus 1014 ~~-------------~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~ 1080 (1099)
.. ...+............+...+ ... ......+.+++.+||+.||++|||+.|+++.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~l 316 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAW----KEN--SLAVRSLKETIEDCWDQDAEARLTAQXAEERMAEL 316 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTC----CCC--SHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHhhhcccCCCchHHHHHhhhcccccCCCCCccc----ccc--cchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHH
Confidence 00 011111111111111111111 011 11122356899999999999999999999999987
Q ss_pred cCCC
Q 047739 1081 RVGP 1084 (1099)
Q Consensus 1081 ~~~~ 1084 (1099)
...-
T Consensus 317 l~~~ 320 (336)
T 3g2f_A 317 MMIW 320 (336)
T ss_dssp HHCC
T ss_pred HHHH
Confidence 6443
No 194
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=4.6e-36 Score=332.30 Aligned_cols=256 Identities=19% Similarity=0.293 Sum_probs=202.5
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCC-------ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCc
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS-------LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 873 (1099)
.++|++.+.||+|+||.||+|... +|+.||+|.+.... ...+.+.+|++++++++||||+++++++.. ...
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~ 82 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN-KTD 82 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecC-CCe
Confidence 467999999999999999999987 58899999885332 135779999999999999999999999985 455
Q ss_pred eEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCC----cEEEeccc
Q 047739 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADF----EAHLSDFG 949 (1099)
Q Consensus 874 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~----~~kl~DfG 949 (1099)
.++||||+++++|.+++... ..+++..+..++.|+++||+|||+.||+||||||+||+++.++ .+||+|||
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 83 VVLILELVSGGELFDFLAEK-----ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEEeecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 69999999999999999753 3489999999999999999999999999999999999998877 89999999
Q ss_pred cccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhcccc
Q 047739 950 LDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQIT 1029 (1099)
Q Consensus 950 la~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 1029 (1099)
+++.... ........|++.|+|||++.+..++.++||||+|+++|||++|+.||......+....+..... ...
T Consensus 158 ~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~ 231 (283)
T 3bhy_A 158 IAHKIEA----GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNY--DFD 231 (283)
T ss_dssp TCEECC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC--CCC
T ss_pred cceeccC----CCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhccc--CCc
Confidence 9976522 1223445799999999999988999999999999999999999999987665544433322100 000
Q ss_pred ccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH--Hhhccc
Q 047739 1030 ELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF--MLEGCR 1081 (1099)
Q Consensus 1030 ~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~--~L~~~~ 1081 (1099)
....+.. -..+.+++.+||+.||++||++.|+++ .++.+.
T Consensus 232 ~~~~~~~------------~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 232 EEYFSNT------------SELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp HHHHTTC------------CHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred chhcccC------------CHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 0000000 013467999999999999999999997 444443
No 195
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.4e-36 Score=351.57 Aligned_cols=250 Identities=20% Similarity=0.296 Sum_probs=192.1
Q ss_pred hccccccccccccceeEEEEEECCceEEEEEECCCCCc---cHHHHHHHHHHhhhcc--CCcceEEeeEEecCCCceEEE
Q 047739 803 RQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSL---DENLFRKEAEFLGKVR--HRNLTVLRGYYAGAPDLRLLV 877 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~~lV 877 (1099)
++|++.+.||+|+||.||+|...+++.||+|.+..... ..+.+.+|++++++++ ||||+++++++... ...|+|
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~-~~~~lv 134 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD-QYIYMV 134 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-SEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecC-CEEEEE
Confidence 46999999999999999999988899999999854332 2367899999999996 59999999998854 457999
Q ss_pred EeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCC
Q 047739 878 YDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPT 957 (1099)
Q Consensus 878 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 957 (1099)
|| +.+|+|.+++... ..+++..+..++.||++||+|||+.+|+||||||+||+++ ++.+||+|||+++.....
T Consensus 135 ~E-~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~ 207 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 207 (390)
T ss_dssp EE-CCSEEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC---
T ss_pred Ee-cCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCC
Confidence 99 4578999999853 2478889999999999999999999999999999999996 589999999999865321
Q ss_pred CCCCccccccccCccccCcccccc-----------CCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhc
Q 047739 958 PAEASTSTTAVGTLGYVSPEAALT-----------GETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKG 1026 (1099)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 1026 (1099)
.........+||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ...+..... +
T Consensus 208 -~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~--~~~~~~~~~-~ 283 (390)
T 2zmd_A 208 -TTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ--ISKLHAIID-P 283 (390)
T ss_dssp -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH--HHHHHHHHC-T
T ss_pred -CccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH--HHHHHHHhC-c
Confidence 11122345689999999999865 36889999999999999999999999754332 111111111 1
Q ss_pred cccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1027 QITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1027 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
...... . .... ..+.+++.+||+.||++||++.|+++.
T Consensus 284 ~~~~~~-------~-~~~~----~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 284 NHEIEF-------P-DIPE----KDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp TSCCCC-------C-CCSC----HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccCCC-------C-ccch----HHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 110000 0 1011 134578999999999999999999864
No 196
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.7e-36 Score=346.82 Aligned_cols=268 Identities=21% Similarity=0.309 Sum_probs=206.8
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCcc--HHHHHHHHHHhhhccCCcceEEeeEEecCC----Cce
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLD--ENLFRKEAEFLGKVRHRNLTVLRGYYAGAP----DLR 874 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~~ 874 (1099)
..+|+..+.||+|+||.||+|... ++..||+|++...... .+.+.+|++++++++||||+++++++.... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 468999999999999999999875 6889999998643322 367889999999999999999999986432 356
Q ss_pred EEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccccc
Q 047739 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLT 954 (1099)
Q Consensus 875 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~ 954 (1099)
++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++..
T Consensus 106 ~iv~e~~~-~~L~~~l~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKT------QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEEEECCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEcccC-cCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 99999997 599999874 23899999999999999999999999999999999999999999999999999865
Q ss_pred CCCCCCCccccccccCccccCcccccc-CCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhcccccc--
Q 047739 955 IPTPAEASTSTTAVGTLGYVSPEAALT-GETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITEL-- 1031 (1099)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~-- 1031 (1099)
.............+||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+....+............
T Consensus 179 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 258 (364)
T 3qyz_A 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 258 (364)
T ss_dssp CGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHT
T ss_pred CCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 333222233455689999999998764 45899999999999999999999999887777666665543322111000
Q ss_pred -cc---Cc--ccCCCCCChhHHHH-----HHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1032 -LE---PG--LLELDPESSEWEEF-----LLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1032 -~d---~~--~~~~~~~~~~~~~~-----~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
.+ .. ..........+... ..+.+++.+||+.||++|||+.|+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 259 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp CCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 00 00000011111111 235689999999999999999999973
No 197
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.7e-36 Score=342.21 Aligned_cols=267 Identities=21% Similarity=0.268 Sum_probs=200.0
Q ss_pred HHhccccccccccccceeEEEEEEC-CceEEEEEECCCCCcc------HHHHHHHHHHhhhccCCcceEEeeEEecCCCc
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLD------ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL 873 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~------~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 873 (1099)
..++|...+.||+|+||.||+|.+. +|+.||+|.+...... .+.+.+|++++++++||||+++++++... ..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~ 86 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK-SN 86 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCT-TC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeC-Cc
Confidence 4578999999999999999999986 5899999998643221 24688999999999999999999999854 45
Q ss_pred eEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccc
Q 047739 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRL 953 (1099)
Q Consensus 874 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~ 953 (1099)
.++||||+++ +|.+++... ...+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++.
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDN----SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTC----CSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred eEEEEEcCCC-CHHHHHHhc----CcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEeccccee
Confidence 6999999985 888888642 34588899999999999999999999999999999999999999999999999986
Q ss_pred cCCCCCCCccccccccCccccCccccccC-CCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccc
Q 047739 954 TIPTPAEASTSTTAVGTLGYVSPEAALTG-ETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELL 1032 (1099)
Q Consensus 954 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1099)
... .........||+.|+|||++.+. .++.++||||+||++|||++|..||......+....+.............
T Consensus 162 ~~~---~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 238 (346)
T 1ua2_A 162 FGS---PNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 238 (346)
T ss_dssp TTS---CCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSS
T ss_pred ccC---CcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhh
Confidence 522 12233456799999999998764 47899999999999999999999998877666655555443222111100
Q ss_pred c----CcccCCCC-CChhHHH-----HHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1033 E----PGLLELDP-ESSEWEE-----FLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1033 d----~~~~~~~~-~~~~~~~-----~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
+ +....... ....... -..+.+++.+||+.||++|||+.|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 239 DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp STTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0 00000000 0001111 1235689999999999999999999985
No 198
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1e-35 Score=352.97 Aligned_cols=195 Identities=22% Similarity=0.329 Sum_probs=152.9
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCc---cHHHHHHHHHHhhhccCCcceEEeeEEecC----CCc
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL---DENLFRKEAEFLGKVRHRNLTVLRGYYAGA----PDL 873 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~----~~~ 873 (1099)
.++|++.++||+|+||.||+|.+. +|+.||+|++..... ..+.+.+|++++++++|||||++++++... ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 468999999999999999999876 589999999865322 346788999999999999999999998533 245
Q ss_pred eEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccc
Q 047739 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRL 953 (1099)
Q Consensus 874 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~ 953 (1099)
.|+||||+. |+|.+++... ..+++..+..++.||++||+|||+.||+||||||+|||++.++.+||+|||+|+.
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 205 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTP-----VYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLART 205 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEeccc-cchhhhcccC-----CCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchh
Confidence 699999984 7999998742 3489999999999999999999999999999999999999999999999999986
Q ss_pred cCCCCCC------------------------CccccccccCccccCccccc-cCCCCCcCchhhHHHHHHHHHh
Q 047739 954 TIPTPAE------------------------ASTSTTAVGTLGYVSPEAAL-TGETTKESDVYSFGIVLLELLT 1002 (1099)
Q Consensus 954 ~~~~~~~------------------------~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DV~S~G~il~ellt 1002 (1099)
....... .......+||++|+|||++. ...++.++||||+||++|||++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 5322111 01234568999999999864 5669999999999999999999
No 199
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=3e-36 Score=335.02 Aligned_cols=248 Identities=22% Similarity=0.353 Sum_probs=196.1
Q ss_pred hccccccccccccceeEEEEEEC-CceEEEEEECCCCC---ccHHHHHHHHHHhhhccCCcceEEeeEEecC---CCceE
Q 047739 803 RQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS---LDENLFRKEAEFLGKVRHRNLTVLRGYYAGA---PDLRL 875 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---~~~~~ 875 (1099)
+.|...+.||+|+||.||+|.+. ++..||+|.+.... ...+.+.+|++++++++||||+++++++... ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 34778889999999999999885 57889999885432 2346789999999999999999999988642 34568
Q ss_pred EEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCC--ceecCCCCCCEEEC-CCCcEEEecccccc
Q 047739 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSN--MVHGDIKPQNVLFD-ADFEAHLSDFGLDR 952 (1099)
Q Consensus 876 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~--iiH~Dlk~~NIll~-~~~~~kl~DfGla~ 952 (1099)
+||||+++|+|.+++... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++ .++.+||+|||++.
T Consensus 106 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEEEecCCCCHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence 999999999999999763 34889999999999999999999999 99999999999998 78999999999997
Q ss_pred ccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccc
Q 047739 953 LTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELL 1032 (1099)
Q Consensus 953 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1099)
... ........||+.|+|||.+. +.++.++||||+|+++|||++|+.||......... ......+......
T Consensus 181 ~~~-----~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~~~~ 251 (290)
T 1t4h_A 181 LKR-----ASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI---YRRVTSGVKPASF 251 (290)
T ss_dssp GCC-----TTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH---HHHHTTTCCCGGG
T ss_pred ccc-----ccccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHH---HHHHhccCCcccc
Confidence 542 12234457999999999876 45899999999999999999999999764443221 1111222111111
Q ss_pred cCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1033 EPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1033 d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
+... ...+.+++.+||+.||++|||+.|+++.
T Consensus 252 ~~~~------------~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 252 DKVA------------IPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp GGCC------------CHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCCC------------CHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 1111 0134689999999999999999999863
No 200
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=5.2e-36 Score=351.21 Aligned_cols=264 Identities=20% Similarity=0.260 Sum_probs=207.3
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCccHHHHHHHHHHhhhc------cCCcceEEeeEEecCCCce
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFRKEAEFLGKV------RHRNLTVLRGYYAGAPDLR 874 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l------~H~niv~l~~~~~~~~~~~ 874 (1099)
..+|++.++||+|+||.||+|... +++.||+|++.......+.+.+|+++++.+ .|+||+++++++... ...
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~-~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR-NHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET-TEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC-CeE
Confidence 457999999999999999999876 489999999977655567788999999888 467999999999854 556
Q ss_pred EEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCc--EEEecccccc
Q 047739 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFE--AHLSDFGLDR 952 (1099)
Q Consensus 875 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~--~kl~DfGla~ 952 (1099)
++||||+. |+|.+++.... ...+++..+..++.||++||+|||+.+|+||||||+||+++.++. +||+|||+|+
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNK---FQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999996 69999998632 234899999999999999999999999999999999999999887 9999999997
Q ss_pred ccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccc----
Q 047739 953 LTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQI---- 1028 (1099)
Q Consensus 953 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~---- 1028 (1099)
... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+.........
T Consensus 251 ~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~ 324 (429)
T 3kvw_A 251 YEH------QRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLD 324 (429)
T ss_dssp ETT------CCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred ecC------CcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence 542 1233468999999999999999999999999999999999999999887776655555443221100
Q ss_pred -----cccccCc--------------------------ccCCCCCChhHHHH------HHHHHHHHhcCCCCCCCCCCHH
Q 047739 1029 -----TELLEPG--------------------------LLELDPESSEWEEF------LLGVKVALLCTAPDPIDRPTMS 1071 (1099)
Q Consensus 1029 -----~~~~d~~--------------------------~~~~~~~~~~~~~~------~~~~~li~~Cl~~dP~~RPs~~ 1071 (1099)
...++.. .....+....+... ..+.+++.+||+.||++|||++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~ 404 (429)
T 3kvw_A 325 ASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPG 404 (429)
T ss_dssp TBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred hhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHH
Confidence 0000000 00011122222222 2356899999999999999999
Q ss_pred HHHHH
Q 047739 1072 DIVFM 1076 (1099)
Q Consensus 1072 evl~~ 1076 (1099)
|+++.
T Consensus 405 e~L~H 409 (429)
T 3kvw_A 405 QALRH 409 (429)
T ss_dssp HHHTS
T ss_pred HHhCC
Confidence 99984
No 201
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=4.3e-36 Score=332.73 Aligned_cols=250 Identities=20% Similarity=0.316 Sum_probs=203.6
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCC----CccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDG----SLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLL 876 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 876 (1099)
.++|.+.+.||+|+||.||+|... ++..||+|.+... ....+.+.+|++++++++||||+++++++.+ ....++
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~l 91 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD-RKRIYL 91 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc-CCEEEE
Confidence 367999999999999999999986 5789999998532 1224678999999999999999999999985 456699
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCC
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIP 956 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 956 (1099)
||||+++|+|.+++... ..+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||++.....
T Consensus 92 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 92 MLEFAPRGELYKELQKH-----GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp EECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred EEEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 99999999999999864 2488999999999999999999999999999999999999999999999999875421
Q ss_pred CCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcc
Q 047739 957 TPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGL 1036 (1099)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1036 (1099)
.......|+..|+|||++.+..++.++||||+|+++|||++|+.||......+....+.. ... .+
T Consensus 167 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~----~~~------~~ 231 (284)
T 2vgo_A 167 -----LRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN----VDL------KF 231 (284)
T ss_dssp -----SCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT----TCC------CC
T ss_pred -----cccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhc----ccc------CC
Confidence 123346799999999999999999999999999999999999999987655444333221 110 00
Q ss_pred cCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH--Hhhcc
Q 047739 1037 LELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF--MLEGC 1080 (1099)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~--~L~~~ 1080 (1099)
.+.. + ..+.+++.+|++.||++||++.|+++ .+...
T Consensus 232 ---~~~~-~----~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~ 269 (284)
T 2vgo_A 232 ---PPFL-S----DGSKDLISKLLRYHPPQRLPLKGVMEHPWVKAN 269 (284)
T ss_dssp ---CTTS-C----HHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHH
T ss_pred ---CCcC-C----HHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhh
Confidence 0010 1 12357899999999999999999986 44433
No 202
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=349.22 Aligned_cols=254 Identities=13% Similarity=0.134 Sum_probs=203.0
Q ss_pred HhccccccccccccceeEEEEE------ECCceEEEEEECCCCCccHHHHHHHHHHhhhcc---CCcceEEeeEEecCCC
Q 047739 802 TRQFDEENVLSRTRYGLVFKAC------YNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVR---HRNLTVLRGYYAGAPD 872 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~------~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~ 872 (1099)
.++|.+.++||+|+||.||+|. ..+++.||+|++... ....+.+|++++++++ |+||+++++++... +
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~-~ 140 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ-N 140 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS-S
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecC-C
Confidence 4679999999999999999994 446889999998653 4567888999888887 99999999999854 4
Q ss_pred ceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECC-----------CC
Q 047739 873 LRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDA-----------DF 941 (1099)
Q Consensus 873 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~-----------~~ 941 (1099)
..++||||+++|+|.++++.........+++..++.++.||++||+|||+.||+||||||+|||++. ++
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~ 220 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSA 220 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CT
T ss_pred CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccC
Confidence 4699999999999999998765555667999999999999999999999999999999999999998 89
Q ss_pred cEEEeccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHH
Q 047739 942 EAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKK 1021 (1099)
Q Consensus 942 ~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~ 1021 (1099)
.+||+|||+|+..... .........+||..|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 221 ~~kl~DFG~a~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~------- 292 (365)
T 3e7e_A 221 GLALIDLGQSIDMKLF-PKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE------- 292 (365)
T ss_dssp TEEECCCTTCEEGGGS-CTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-------
T ss_pred CEEEeeCchhhhhhcc-CCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-------
Confidence 9999999999754211 22334456789999999999999999999999999999999999999986432210
Q ss_pred HhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCC-CCHHHHHHHhhccc
Q 047739 1022 QLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDR-PTMSDIVFMLEGCR 1081 (1099)
Q Consensus 1022 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~R-Ps~~evl~~L~~~~ 1081 (1099)
.. ....+... +.. + ...+++..|++.+|.+| |++.++.+.|++..
T Consensus 293 ----~~----~~~~~~~~-~~~---~---~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l 338 (365)
T 3e7e_A 293 ----CK----PEGLFRRL-PHL---D---MWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVF 338 (365)
T ss_dssp ----EE----ECSCCTTC-SSH---H---HHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHH
T ss_pred ----ee----echhcccc-CcH---H---HHHHHHHHHcCCCCCCcchHHHHHHHHHHHHH
Confidence 00 11111111 111 1 22367888999999998 67888888887654
No 203
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.3e-36 Score=341.97 Aligned_cols=263 Identities=22% Similarity=0.342 Sum_probs=203.8
Q ss_pred HhccccccccccccceeEEEEEE-----CCceEEEEEECCCCC-ccHHHHHHHHHHhhhccCCcceEEeeEEecCC-Cce
Q 047739 802 TRQFDEENVLSRTRYGLVFKACY-----NDGMVLSIRRLPDGS-LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAP-DLR 874 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~ 874 (1099)
.++|++.+.||+|+||.||+|.+ .+|+.||+|++.... ...+.+.+|++++++++||||+++++++.... ...
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 45789999999999999999985 358999999986543 33467999999999999999999999986443 356
Q ss_pred EEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccccc
Q 047739 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLT 954 (1099)
Q Consensus 875 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~ 954 (1099)
++||||+++|+|.+++... ...+++..++.++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++..
T Consensus 120 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~ 195 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 195 (326)
T ss_dssp EEEECCCTTCBHHHHHHHS----TTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEECCCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence 8999999999999999753 234899999999999999999999999999999999999999999999999999865
Q ss_pred CCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCch------------hHHHHHHHH
Q 047739 955 IPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDE------------DIVKWVKKQ 1022 (1099)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~------------~~~~~~~~~ 1022 (1099)
..............++..|+|||.+.+..++.++||||+|+++|||++|..||.....+ .....+...
T Consensus 196 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (326)
T 2w1i_A 196 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 275 (326)
T ss_dssp CSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHH
T ss_pred cccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHH
Confidence 33222112233456788899999999888999999999999999999999987532110 001111111
Q ss_pred hhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhccc
Q 047739 1023 LQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCR 1081 (1099)
Q Consensus 1023 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 1081 (1099)
+..+... ..+...+ ..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 276 ~~~~~~~---------~~~~~~~----~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 276 LKNNGRL---------PRPDGCP----DEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp HHTTCCC---------CCCTTCC----HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhcCCCC---------CCCCccc----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1111100 0011111 23457899999999999999999999998764
No 204
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.4e-36 Score=343.94 Aligned_cols=260 Identities=25% Similarity=0.369 Sum_probs=203.1
Q ss_pred HhccccccccccccceeEEEEEEC-CceE--EEEEECCCC--CccHHHHHHHHHHhhhc-cCCcceEEeeEEecCCCceE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMV--LSIRRLPDG--SLDENLFRKEAEFLGKV-RHRNLTVLRGYYAGAPDLRL 875 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~--vavK~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~ 875 (1099)
.++|...+.||+|+||.||+|.+. ++.. |++|.+... ....+.+.+|+++++++ +||||+++++++.+. ...+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~-~~~~ 102 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR-GYLY 102 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEET-TEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeC-CceE
Confidence 367999999999999999999875 4554 588887542 23346789999999999 899999999999854 5569
Q ss_pred EEEeecCCCCHHHHHhhhcc-----------CCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEE
Q 047739 876 LVYDYMPNGNLGTLLQEASH-----------QDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAH 944 (1099)
Q Consensus 876 lV~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~k 944 (1099)
+||||+++|+|.+++..... .....+++..++.++.|+++||+|||+.||+||||||+||+++.++.+|
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~k 182 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK 182 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEE
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEE
Confidence 99999999999999975421 2234689999999999999999999999999999999999999999999
Q ss_pred EeccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHh
Q 047739 945 LSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQL 1023 (1099)
Q Consensus 945 l~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~ 1023 (1099)
|+|||+++... .........++..|+|||++.+..++.++||||+|+++|||++ |+.||......+....+.
T Consensus 183 L~Dfg~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~--- 255 (327)
T 1fvr_A 183 IADFGLSRGQE----VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP--- 255 (327)
T ss_dssp ECCTTCEESSC----EECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGG---
T ss_pred EcccCcCcccc----ccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhh---
Confidence 99999987431 1222334567889999999988889999999999999999998 999998766544333222
Q ss_pred hhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCC
Q 047739 1024 QKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVG 1083 (1099)
Q Consensus 1024 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 1083 (1099)
.+.... . +...+ ..+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 256 -~~~~~~--------~-~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 256 -QGYRLE--------K-PLNCD----DEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp -GTCCCC--------C-CTTBC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred -cCCCCC--------C-CCCCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 111000 0 01111 1245789999999999999999999999876543
No 205
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.5e-35 Score=339.06 Aligned_cols=268 Identities=19% Similarity=0.228 Sum_probs=206.2
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCc---cHHHHHHHHHHhhhccCCcceEEeeEEecC-------
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL---DENLFRKEAEFLGKVRHRNLTVLRGYYAGA------- 870 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------- 870 (1099)
..+|++.+.||+|+||.||+|... +|+.||+|++..... ....+.+|++++++++||||+++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 368999999999999999999984 689999999854332 235688999999999999999999998753
Q ss_pred CCceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccc
Q 047739 871 PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGL 950 (1099)
Q Consensus 871 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGl 950 (1099)
....++||||++ |+|.+.+... ...+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||+
T Consensus 96 ~~~~~lv~e~~~-~~l~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 96 KGSIYLVFDFCE-HDLAGLLSNV----LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp -CEEEEEEECCS-EEHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CceEEEEEeccC-CCHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchh
Confidence 335689999997 4888877642 23489999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCC-CCCccccccccCccccCcccccc-CCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccc
Q 047739 951 DRLTIPTP-AEASTSTTAVGTLGYVSPEAALT-GETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQI 1028 (1099)
Q Consensus 951 a~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 1028 (1099)
++...... ..........||+.|+|||++.+ ..++.++||||+||++|||++|+.||...........+........
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~- 249 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT- 249 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC-
T ss_pred cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC-
Confidence 98653221 12233455689999999999876 4579999999999999999999999988777666655554432211
Q ss_pred cccccCcc---------cCCCCC-ChhHHHH------HHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1029 TELLEPGL---------LELDPE-SSEWEEF------LLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1029 ~~~~d~~~---------~~~~~~-~~~~~~~------~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
....+.. ...... ....+.+ ..+.+++.+||+.||++|||++|+++.
T Consensus 250 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 250 -PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp -TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 1110000 000000 1111111 125689999999999999999999874
No 206
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-36 Score=342.20 Aligned_cols=254 Identities=23% Similarity=0.353 Sum_probs=198.6
Q ss_pred HHHhccccccccccccceeEEEEEEC-CceEEEEEECCCCCccHHHHHHHHHHhhhc-cCCcceEEeeEEecC-----CC
Q 047739 800 EATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFRKEAEFLGKV-RHRNLTVLRGYYAGA-----PD 872 (1099)
Q Consensus 800 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~-----~~ 872 (1099)
...++|++.+.||+|+||.||+|.+. +|+.||+|.+.......+.+.+|+++++++ +||||+++++++... ..
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~ 100 (326)
T 2x7f_A 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 100 (326)
T ss_dssp CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCC
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccc
Confidence 34678999999999999999999984 689999999876666678899999999999 799999999998753 35
Q ss_pred ceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccc
Q 047739 873 LRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR 952 (1099)
Q Consensus 873 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~ 952 (1099)
..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++.
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~ 177 (326)
T 2x7f_A 101 QLWLVMEFCGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSA 177 (326)
T ss_dssp EEEEEEECCTTEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC
T ss_pred eEEEEEEcCCCCcHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCce
Confidence 6799999999999999998532 2458899999999999999999999999999999999999999999999999987
Q ss_pred ccCCCCCCCccccccccCccccCccccc-----cCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhcc
Q 047739 953 LTIPTPAEASTSTTAVGTLGYVSPEAAL-----TGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027 (1099)
Q Consensus 953 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 1027 (1099)
.... .........||..|+|||++. +..++.++||||||+++|||++|+.||...........+.. ..
T Consensus 178 ~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~~ 250 (326)
T 2x7f_A 178 QLDR---TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR----NP 250 (326)
T ss_dssp ----------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH----SC
T ss_pred ecCc---CccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhc----Cc
Confidence 6421 112234457999999999987 56789999999999999999999999976554433322221 11
Q ss_pred ccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1028 ITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1028 ~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
........+ . ..+.+++.+||+.||++||++.|+++
T Consensus 251 ~~~~~~~~~--------~----~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 251 APRLKSKKW--------S----KKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp CCCCSCSCS--------C----HHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cccCCcccc--------C----HHHHHHHHHHhccChhhCCCHHHHhh
Confidence 111111111 1 13457899999999999999999987
No 207
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=6.5e-36 Score=336.79 Aligned_cols=258 Identities=19% Similarity=0.283 Sum_probs=192.9
Q ss_pred hccccc-cccccccceeEEEEEEC-CceEEEEEECCCCC-ccHHHHHHHHHHhhhc-cCCcceEEeeEEecCCCceEEEE
Q 047739 803 RQFDEE-NVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS-LDENLFRKEAEFLGKV-RHRNLTVLRGYYAGAPDLRLLVY 878 (1099)
Q Consensus 803 ~~~~~~-~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV~ 878 (1099)
++|.+. ++||+|+||.||+|... +++.||+|++.... ...+.+.+|+++++++ +||||+++++++.+. +..++||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~-~~~~lv~ 90 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEE-DRFYLVF 90 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEET-TEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC-CEEEEEE
Confidence 467774 78999999999999865 68999999985443 3457799999999985 799999999999854 5569999
Q ss_pred eecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCc---EEEeccccccccC
Q 047739 879 DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFE---AHLSDFGLDRLTI 955 (1099)
Q Consensus 879 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~---~kl~DfGla~~~~ 955 (1099)
||+++|+|.+++... ..+++..+..++.|+++||+|||+.+|+||||||+||+++.++. +||+|||+++...
T Consensus 91 e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 165 (316)
T 2ac3_A 91 EKMRGGSILSHIHKR-----RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK 165 (316)
T ss_dssp ECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred EcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence 999999999999863 24889999999999999999999999999999999999988766 9999999987542
Q ss_pred CCCC----CCccccccccCccccCcccccc-----CCCCCcCchhhHHHHHHHHHhCCCCCCCCCchh-----------H
Q 047739 956 PTPA----EASTSTTAVGTLGYVSPEAALT-----GETTKESDVYSFGIVLLELLTGKRPVMFTQDED-----------I 1015 (1099)
Q Consensus 956 ~~~~----~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~-----------~ 1015 (1099)
.... ........+||..|+|||++.+ ..++.++||||+||++|||++|+.||......+ .
T Consensus 166 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 245 (316)
T 2ac3_A 166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPAC 245 (316)
T ss_dssp ----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHH
T ss_pred cCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhH
Confidence 2111 1112234569999999999875 458899999999999999999999997643211 0
Q ss_pred HHHHHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1016 VKWVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1016 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
...+...+..+... .....+... -..+.+++.+||+.||++|||+.|+++.
T Consensus 246 ~~~~~~~i~~~~~~-~~~~~~~~~---------~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 246 QNMLFESIQEGKYE-FPDKDWAHI---------SCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHHHCCCC-CCHHHHTTS---------CHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHhccCcc-cCchhcccC---------CHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 11112222222110 000000000 0234689999999999999999999984
No 208
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.2e-36 Score=342.32 Aligned_cols=266 Identities=19% Similarity=0.243 Sum_probs=195.4
Q ss_pred HHHhccccccccccccceeEEEEEEC-CceEEEEEECCCCCcc---HHHHHHHHHHhhhccCCcceEEeeEEecCCCceE
Q 047739 800 EATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLD---ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875 (1099)
Q Consensus 800 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 875 (1099)
...++|.+.++||+|+||.||+|... +++.||+|++...... .+.+.+|++++++++||||+++++++.+. ...+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~ 109 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHN-HRLH 109 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEET-TEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecC-CEEE
Confidence 34678999999999999999999875 6899999999654332 35678999999999999999999999854 5569
Q ss_pred EEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEE-----CCCCcEEEecccc
Q 047739 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLF-----DADFEAHLSDFGL 950 (1099)
Q Consensus 876 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll-----~~~~~~kl~DfGl 950 (1099)
+||||++ |+|.+++... ..+++..+..++.||+.||+|||+.+|+||||||+||++ +.++.+||+|||+
T Consensus 110 lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 110 LIFEYAE-NDLKKYMDKN-----PDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EEEECCS-EEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EEEecCC-CCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 9999997 5999999753 238999999999999999999999999999999999999 4556699999999
Q ss_pred ccccCCCCCCCccccccccCccccCccccccC-CCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhcccc
Q 047739 951 DRLTIPTPAEASTSTTAVGTLGYVSPEAALTG-ETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQIT 1029 (1099)
Q Consensus 951 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 1029 (1099)
++.... .........||..|+|||++.+. .++.++||||+||++|||++|+.||......+....+..........
T Consensus 184 a~~~~~---~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 260 (329)
T 3gbz_A 184 ARAFGI---PIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDT 260 (329)
T ss_dssp HHHHC--------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTT
T ss_pred ccccCC---cccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchh
Confidence 976521 12233456789999999999875 48999999999999999999999998776665555544432211100
Q ss_pred cc--------ccCcccCCCCCChhHH----HHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1030 EL--------LEPGLLELDPESSEWE----EFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1030 ~~--------~d~~~~~~~~~~~~~~----~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
.. ....+........... .-..+.+++.+||+.||++|||++|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 261 TWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 00 0000000000000000 0123468999999999999999999987
No 209
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.3e-36 Score=341.25 Aligned_cols=242 Identities=19% Similarity=0.314 Sum_probs=197.4
Q ss_pred HHhccccccccccccceeEEEEEEC-CceEEEEEECCCCCc---------cHHHHHHHHHHhhhccCCcceEEeeEEecC
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL---------DENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 870 (1099)
..++|+..+.||+|+||.||+|... +++.||+|.+..... ..+.+.+|++++++++||||+++++++.+
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~- 100 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN- 100 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC-
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee-
Confidence 4678999999999999999999875 589999999865432 22457889999999999999999999984
Q ss_pred CCceEEEEeecCCC-CHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccc
Q 047739 871 PDLRLLVYDYMPNG-NLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFG 949 (1099)
Q Consensus 871 ~~~~~lV~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfG 949 (1099)
....++||||+.+| +|.+++... ..+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||
T Consensus 101 ~~~~~lv~e~~~~g~~l~~~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 101 QGFFQLVMEKHGSGLDLFAFIDRH-----PRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp SSEEEEEEECCTTSCBHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEEeCCCCccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecc
Confidence 45669999999777 999999753 348999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCccccccccCccccCccccccCCC-CCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccc
Q 047739 950 LDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQI 1028 (1099)
Q Consensus 950 la~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 1028 (1099)
+++.... ........||+.|+|||++.+..+ +.++||||+|+++|||++|+.||......
T Consensus 176 ~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------------- 236 (335)
T 3dls_A 176 SAAYLER----GKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET--------------- 236 (335)
T ss_dssp TCEECCT----TCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG---------------
T ss_pred cceECCC----CCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH---------------
Confidence 9986522 223345679999999999988876 78999999999999999999999642110
Q ss_pred cccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1029 TELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1029 ~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
....... +.... ..+.+++.+||+.||++|||+.|+++.
T Consensus 237 ---~~~~~~~--~~~~~----~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 ---VEAAIHP--PYLVS----KELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ---TTTCCCC--SSCCC----HHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ---HhhccCC--CcccC----HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000 00011 124578999999999999999999985
No 210
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.5e-36 Score=349.34 Aligned_cols=271 Identities=20% Similarity=0.257 Sum_probs=186.3
Q ss_pred Hhcccc-ccccccccceeEEEEEEC---CceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEec-CCCceEE
Q 047739 802 TRQFDE-ENVLSRTRYGLVFKACYN---DGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAG-APDLRLL 876 (1099)
Q Consensus 802 ~~~~~~-~~~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~~l 876 (1099)
.+.|+. .++||+|+||.||+|.++ ++..||+|++..... .+.+.+|++++++++||||+++++++.. .....++
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 345665 568999999999999976 478999999975433 3568899999999999999999999863 4556789
Q ss_pred EEeecCCCCHHHHHhhhcc----CCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEE----CCCCcEEEecc
Q 047739 877 VYDYMPNGNLGTLLQEASH----QDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLF----DADFEAHLSDF 948 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~----~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll----~~~~~~kl~Df 948 (1099)
||||++ |+|.+++..... .....+++..+..++.||+.||+|||+.+|+||||||+||++ +.++.+||+||
T Consensus 98 v~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 176 (405)
T 3rgf_A 98 LFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADM 176 (405)
T ss_dssp EEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCT
T ss_pred EEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEEC
Confidence 999996 588888864321 122348999999999999999999999999999999999999 67889999999
Q ss_pred ccccccCCCCCCCccccccccCccccCccccccC-CCCCcCchhhHHHHHHHHHhCCCCCCCCCch---------hHHHH
Q 047739 949 GLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTG-ETTKESDVYSFGIVLLELLTGKRPVMFTQDE---------DIVKW 1018 (1099)
Q Consensus 949 Gla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~G~il~elltg~~P~~~~~~~---------~~~~~ 1018 (1099)
|+|+...............+||+.|+|||++.+. .++.++||||+||++|||++|+.||...... +....
T Consensus 177 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~ 256 (405)
T 3rgf_A 177 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR 256 (405)
T ss_dssp TCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHH
T ss_pred CCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHH
Confidence 9998653222222334567899999999999874 4899999999999999999999999755432 22333
Q ss_pred HHHHhhhccccccccCcccCCC-------------CCChhHHH---------HHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1019 VKKQLQKGQITELLEPGLLELD-------------PESSEWEE---------FLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1019 ~~~~~~~~~~~~~~d~~~~~~~-------------~~~~~~~~---------~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
+......... ...+.+.... ........ -..+.+++.+||+.||++|||++|+++.
T Consensus 257 i~~~~g~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 257 IFNVMGFPAD--KDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHHHHCCCCT--TTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhhCCCCh--hhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 3322221110 0000000000 00000000 1234689999999999999999999985
No 211
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.3e-36 Score=348.43 Aligned_cols=267 Identities=20% Similarity=0.350 Sum_probs=201.2
Q ss_pred HHHhccccccccccccceeEEEEEEC-CceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecC--------
Q 047739 800 EATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA-------- 870 (1099)
Q Consensus 800 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-------- 870 (1099)
...++|...+.||+|+||.||+|... +|+.||+|++.... +...+|++++++++||||+++++++...
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 80 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP---RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPP 80 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHTTCCCTTBCCEEEEEEEC--------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHHcCCCCccchhheeeecCccccccc
Confidence 34678999999999999999999874 68999999985432 2345799999999999999999998532
Q ss_pred -----------------------------CCceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHc
Q 047739 871 -----------------------------PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLH 921 (1099)
Q Consensus 871 -----------------------------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH 921 (1099)
....++||||++ |+|.+.+..... ....+++..+..++.||++||+|||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 81 QPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIR-SGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp -----------------------------CCEEEEEECCCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 223689999998 588888875432 3356899999999999999999999
Q ss_pred cCCceecCCCCCCEEEC-CCCcEEEeccccccccCCCCCCCccccccccCccccCccccccC-CCCCcCchhhHHHHHHH
Q 047739 922 TSNMVHGDIKPQNVLFD-ADFEAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTG-ETTKESDVYSFGIVLLE 999 (1099)
Q Consensus 922 ~~~iiH~Dlk~~NIll~-~~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~G~il~e 999 (1099)
+.||+||||||+||+++ .++.+||+|||+|+.... ........||..|+|||.+.+. .++.++||||+||++||
T Consensus 159 ~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e 234 (383)
T 3eb0_A 159 SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIP----SEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGE 234 (383)
T ss_dssp TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCT----TSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCC----CCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHH
Confidence 99999999999999998 689999999999986522 2233456789999999998875 48999999999999999
Q ss_pred HHhCCCCCCCCCchhHHHHHHHHhhhcccccc--ccCcccCC---CCCChhHHHH------HHHHHHHHhcCCCCCCCCC
Q 047739 1000 LLTGKRPVMFTQDEDIVKWVKKQLQKGQITEL--LEPGLLEL---DPESSEWEEF------LLGVKVALLCTAPDPIDRP 1068 (1099)
Q Consensus 1000 lltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~~~~~---~~~~~~~~~~------~~~~~li~~Cl~~dP~~RP 1068 (1099)
|++|+.||......+....+.+.......... .++.+.+. ......+... ..+.+++.+||+.||++||
T Consensus 235 ll~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 314 (383)
T 3eb0_A 235 LILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRI 314 (383)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSC
T ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCC
Confidence 99999999887766655555443322111000 00000000 0001111111 2356899999999999999
Q ss_pred CHHHHHH
Q 047739 1069 TMSDIVF 1075 (1099)
Q Consensus 1069 s~~evl~ 1075 (1099)
|+.|+++
T Consensus 315 t~~e~l~ 321 (383)
T 3eb0_A 315 NPYEAMA 321 (383)
T ss_dssp CHHHHHT
T ss_pred CHHHHhc
Confidence 9999984
No 212
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=5.4e-36 Score=353.71 Aligned_cols=261 Identities=18% Similarity=0.216 Sum_probs=203.4
Q ss_pred HhccccccccccccceeEEEEEE-CCceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEee
Q 047739 802 TRQFDEENVLSRTRYGLVFKACY-NDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDY 880 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e~ 880 (1099)
.++|.+.++||+|+||.||+|.+ .+++.||||.+.... ..+.+.+|+++++.++|++.+..+.++.......++||||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~ 84 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL 84 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC-SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc-ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence 46799999999999999999997 468999999875433 2345889999999998865555555554456677999999
Q ss_pred cCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEE---CCCCcEEEeccccccccCCC
Q 047739 881 MPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLF---DADFEAHLSDFGLDRLTIPT 957 (1099)
Q Consensus 881 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll---~~~~~~kl~DfGla~~~~~~ 957 (1099)
+ +++|.+++... ...+++..++.|+.||+.||+|||+.+|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 85 ~-g~sL~~ll~~~----~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 85 L-GPSLEDLFNFC----SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp C-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred C-CCCHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 9 89999999753 2358999999999999999999999999999999999999 68899999999999865332
Q ss_pred CCCC----ccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHH---HHHhhhccccc
Q 047739 958 PAEA----STSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWV---KKQLQKGQITE 1030 (1099)
Q Consensus 958 ~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~---~~~~~~~~~~~ 1030 (1099)
.... .......||..|+|||++.+..++.++|||||||++|||++|+.||.........+.+ ........+..
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEA 239 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHH
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHH
Confidence 2111 1233678999999999999999999999999999999999999999875543332222 22211111111
Q ss_pred cccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhccc
Q 047739 1031 LLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCR 1081 (1099)
Q Consensus 1031 ~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 1081 (1099)
.. ..+. ..+.+++.+||+.||++||++.+|++.|+++.
T Consensus 240 l~-~~~p------------~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~ 277 (483)
T 3sv0_A 240 LC-RGYP------------TEFASYFHYCRSLRFDDKPDYSYLKRLFRDLF 277 (483)
T ss_dssp HH-TTSC------------HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred Hh-cCCc------------HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 11 1110 13468999999999999999999999998773
No 213
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=5.6e-36 Score=341.39 Aligned_cols=272 Identities=21% Similarity=0.277 Sum_probs=209.2
Q ss_pred HHHHHHhccccccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhh--ccCCcceEEeeEEecCC---
Q 047739 797 ETVEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGK--VRHRNLTVLRGYYAGAP--- 871 (1099)
Q Consensus 797 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~--- 871 (1099)
......++|.+.+.||+|+||.||+|.+. |+.||+|.+.. ...+.+.+|+++++. ++||||+++++++....
T Consensus 36 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~--~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 36 VQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSS--REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECG--GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred ecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCc--hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 34456789999999999999999999985 88999999853 345678889999988 78999999999998554
Q ss_pred CceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHc--------cCCceecCCCCCCEEECCCCcE
Q 047739 872 DLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLH--------TSNMVHGDIKPQNVLFDADFEA 943 (1099)
Q Consensus 872 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~iiH~Dlk~~NIll~~~~~~ 943 (1099)
...++||||+++|+|.+++++. .+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~ 186 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 186 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCE
T ss_pred ceeEEEEeecCCCcHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCE
Confidence 2579999999999999999752 3899999999999999999999 8999999999999999999999
Q ss_pred EEeccccccccCCCCCC-CccccccccCccccCccccccCC------CCCcCchhhHHHHHHHHHhC----------CCC
Q 047739 944 HLSDFGLDRLTIPTPAE-ASTSTTAVGTLGYVSPEAALTGE------TTKESDVYSFGIVLLELLTG----------KRP 1006 (1099)
Q Consensus 944 kl~DfGla~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DV~S~G~il~elltg----------~~P 1006 (1099)
||+|||+++........ ........||..|+|||++.+.. ++.++||||||+++|||++| +.|
T Consensus 187 kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p 266 (342)
T 1b6c_B 187 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 266 (342)
T ss_dssp EECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccC
Confidence 99999999765322111 11234567999999999987653 33689999999999999999 778
Q ss_pred CCCCCchh-HHHHHHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCC
Q 047739 1007 VMFTQDED-IVKWVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGP 1084 (1099)
Q Consensus 1007 ~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 1084 (1099)
|....... ....+............+...+ ...+....+.+++.+||+.||++|||+.||++.|+++....
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 267 YYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW-------QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG-------GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred ccccCcCcccHHHHHHHHHHHHhCCCCcccc-------cchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 86542211 1222222222221111111111 11123344578999999999999999999999999876543
No 214
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.1e-36 Score=353.72 Aligned_cols=252 Identities=20% Similarity=0.298 Sum_probs=190.1
Q ss_pred HHHhccccccccccccceeEEEEEEC-CceEEEEEECCCCCc---------cHHHHHHHHHHhhhccCCcceEEeeEEec
Q 047739 800 EATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL---------DENLFRKEAEFLGKVRHRNLTVLRGYYAG 869 (1099)
Q Consensus 800 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 869 (1099)
...++|.+.+.||+|+||.||+|... +++.||+|.+..... ....+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 45678999999999999999999876 478999999853211 12358899999999999999999999863
Q ss_pred CCCceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCC---CcEEEe
Q 047739 870 APDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDAD---FEAHLS 946 (1099)
Q Consensus 870 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~---~~~kl~ 946 (1099)
...++||||+++|+|.+++... ..+++..+..++.|+++||+|||+.+|+||||||+||+++.+ +.+||+
T Consensus 212 --~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 212 --EDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp --SEEEEEEECCTTCBGGGGTSSS-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred --CceEEEEEcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEe
Confidence 3368999999999999988642 358999999999999999999999999999999999999754 459999
Q ss_pred ccccccccCCCCCCCccccccccCccccCcccccc---CCCCCcCchhhHHHHHHHHHhCCCCCCCCCch-hHHHHHHHH
Q 047739 947 DFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALT---GETTKESDVYSFGIVLLELLTGKRPVMFTQDE-DIVKWVKKQ 1022 (1099)
Q Consensus 947 DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DV~S~G~il~elltg~~P~~~~~~~-~~~~~~~~~ 1022 (1099)
|||+|+... ........+||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+..
T Consensus 285 DFG~a~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~- 359 (419)
T 3i6u_A 285 DFGHSKILG----ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS- 359 (419)
T ss_dssp CSSTTTSCC---------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHT-
T ss_pred ecccceecC----CCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhc-
Confidence 999998652 2223345689999999999863 56788999999999999999999999754432 22222221
Q ss_pred hhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1023 LQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1023 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
+... ...+.+... -..+.+++.+||+.||++||+++|+++.
T Consensus 360 ---~~~~-~~~~~~~~~---------~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 360 ---GKYN-FIPEVWAEV---------SEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp ---TCCC-CCHHHHTTS---------CHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ---CCCC-CCchhhccc---------CHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 1110 000000000 1234689999999999999999999874
No 215
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.5e-38 Score=351.47 Aligned_cols=268 Identities=22% Similarity=0.297 Sum_probs=187.8
Q ss_pred HhccccccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhh--ccCCcceEEeeEEecCCC---ceEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGK--VRHRNLTVLRGYYAGAPD---LRLL 876 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~~---~~~l 876 (1099)
.++|.+.+.||+|+||.||+|++. |+.||+|++... ....+.+|.+++.. ++||||+++++++..... ..++
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T--THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc--chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 367999999999999999999876 889999998643 44667788888887 799999999999875542 5689
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHc--------cCCceecCCCCCCEEECCCCcEEEecc
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLH--------TSNMVHGDIKPQNVLFDADFEAHLSDF 948 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~iiH~Dlk~~NIll~~~~~~kl~Df 948 (1099)
||||+++|+|.+++++. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 79 v~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DF 152 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEECCTTCCHHHHHHHC------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCC
T ss_pred EEeccCCCCHHHHHhcc------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeec
Confidence 99999999999999752 3778889999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCCCC-CccccccccCccccCccccccC------CCCCcCchhhHHHHHHHHHhC----------CCCCCCCC
Q 047739 949 GLDRLTIPTPAE-ASTSTTAVGTLGYVSPEAALTG------ETTKESDVYSFGIVLLELLTG----------KRPVMFTQ 1011 (1099)
Q Consensus 949 Gla~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DV~S~G~il~elltg----------~~P~~~~~ 1011 (1099)
|+++........ ........||+.|+|||++.+. .++.++||||||+++|||++| +.||....
T Consensus 153 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~ 232 (303)
T 3gxj_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp CC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTC
T ss_pred CcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccC
Confidence 999765322211 1123445799999999998776 344689999999999999999 66664322
Q ss_pred chh-HHHHHHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCCC
Q 047739 1012 DED-IVKWVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPD 1085 (1099)
Q Consensus 1012 ~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 1085 (1099)
... ....+................+ ...+....+.+++.+||+.||++|||+.||++.|+++.....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~~ 300 (303)
T 3gxj_A 233 PSDPSVEEMRKVVCEQKLRPNIPNRW-------QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp C-CCCCC-CHHHHTTSCCCCCCCGGG-------GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC--
T ss_pred CCCccHHHHHHHHHHhhcCCCccccc-------cchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhcc
Confidence 110 0111111111111111111111 111233456789999999999999999999999999876554
No 216
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=8.9e-37 Score=344.06 Aligned_cols=264 Identities=20% Similarity=0.288 Sum_probs=201.8
Q ss_pred HhccccccccccccceeEEEEEE-CCceEEEEEECCCCC-ccHHHHHHHHHHhhhccCCcceEEeeEEec---CCCceEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACY-NDGMVLSIRRLPDGS-LDENLFRKEAEFLGKVRHRNLTVLRGYYAG---APDLRLL 876 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~---~~~~~~l 876 (1099)
.++|+..+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|++++++++||||+++++++.. .....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 46799999999999999999998 568999999885433 345678999999999999999999999863 2335689
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCC
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIP 956 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 956 (1099)
||||+++|+|.+++..... ....+++..++.++.|+++||+|||+.+|+||||||+||+++.++.+||+|||+++....
T Consensus 108 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 186 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACI 186 (317)
T ss_dssp EEECCTTCBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCE
T ss_pred EEEeCCCCcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhccc
Confidence 9999999999999986432 345689999999999999999999999999999999999999999999999999875421
Q ss_pred CCCCC------ccccccccCccccCccccccCC---CCCcCchhhHHHHHHHHHhCCCCCCCCC--chhHHHHHHHHhhh
Q 047739 957 TPAEA------STSTTAVGTLGYVSPEAALTGE---TTKESDVYSFGIVLLELLTGKRPVMFTQ--DEDIVKWVKKQLQK 1025 (1099)
Q Consensus 957 ~~~~~------~~~~~~~gt~~y~aPE~~~~~~---~~~~~DV~S~G~il~elltg~~P~~~~~--~~~~~~~~~~~~~~ 1025 (1099)
..... .......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||.... .......+. .
T Consensus 187 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~----~ 262 (317)
T 2buj_A 187 HVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ----N 262 (317)
T ss_dssp EEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHH----C
T ss_pred ccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhh----c
Confidence 10000 0112346799999999987554 6899999999999999999999985311 111111111 1
Q ss_pred ccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCC
Q 047739 1026 GQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVG 1083 (1099)
Q Consensus 1026 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~ 1083 (1099)
... . +. ....+ ..+.+++.+||+.||++||++.|+++.|+.+...
T Consensus 263 -~~~-~--~~-----~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 263 -QLS-I--PQ-----SPRHS----SALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp -C---C--CC-----CTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred -cCC-C--Cc-----cccCC----HHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 000 0 00 00001 1346799999999999999999999999988643
No 217
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=8.7e-36 Score=356.11 Aligned_cols=251 Identities=22% Similarity=0.291 Sum_probs=202.6
Q ss_pred HHhccccccccccccceeEEEEEEC-CceEEEEEECCC---CCccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEE
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPD---GSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLL 876 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 876 (1099)
..++|.+.++||+|+||.||+|... +++.||+|++.. .....+.+.+|++++++++||||+++++++.+ ....|+
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~l 98 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-SSSFYI 98 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEc-CCEEEE
Confidence 4568999999999999999999986 689999999843 22345778999999999999999999999985 455699
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEEC---CCCcEEEeccccccc
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFD---ADFEAHLSDFGLDRL 953 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~---~~~~~kl~DfGla~~ 953 (1099)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+.||+||||||+||+++ .++.+||+|||+++.
T Consensus 99 v~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 99 VGELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp EECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 99999999999998753 3489999999999999999999999999999999999995 456799999999986
Q ss_pred cCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhcccccccc
Q 047739 954 TIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLE 1033 (1099)
Q Consensus 954 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 1033 (1099)
... .......+||+.|+|||++.+ .++.++||||+||++|+|++|+.||......+....+........ .
T Consensus 174 ~~~----~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~-----~ 243 (486)
T 3mwu_A 174 FQQ----NTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD-----L 243 (486)
T ss_dssp BCC----C----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSC-----S
T ss_pred CCC----CCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC-----C
Confidence 522 223345689999999999875 589999999999999999999999988776665555443211110 0
Q ss_pred CcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1034 PGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
+.+... . ..+.+++.+||+.||++|||+.|+++.
T Consensus 244 ~~~~~~---s------~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 244 PQWRTI---S------DDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp GGGGGS---C------HHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred cccCCC---C------HHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111100 0 124589999999999999999999974
No 218
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=335.45 Aligned_cols=249 Identities=20% Similarity=0.340 Sum_probs=179.1
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCc----cHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL----DENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLL 876 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 876 (1099)
.++|.+.+.||+|+||.||+|... +|+.||+|.+..... ..+.+.+|++++++++||||+++++++.+ ....++
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~l 88 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFED-SNYVYL 88 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEEC-SSEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEcc-CCeEEE
Confidence 457999999999999999999974 689999999853221 23678999999999999999999999985 456699
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCC
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIP 956 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 956 (1099)
||||+++++|.+++... ...+++..+..++.|+++||+|||+.+|+||||||+||+++.++.+||+|||++.....
T Consensus 89 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNR----VKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp EEECCTTEEHHHHHHTC----SSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EEecCCCCcHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 99999999999999742 24589999999999999999999999999999999999999999999999999976521
Q ss_pred CCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcc
Q 047739 957 TPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGL 1036 (1099)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1036 (1099)
. ........||+.|+|||.+.+..++.++||||+|+++|||++|+.||......+....+ ... ..
T Consensus 165 ~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~----~~~--------~~ 229 (278)
T 3cok_A 165 P---HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV----VLA--------DY 229 (278)
T ss_dssp ------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----C----CSS--------CC
T ss_pred C---CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHH----hhc--------cc
Confidence 1 12233467899999999999888999999999999999999999999765443322111 000 00
Q ss_pred cCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1037 LELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
... .... ..+.+++.+||+.||++||+++|+++.
T Consensus 230 -~~~-~~~~----~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 230 -EMP-SFLS----IEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp -CCC-TTSC----HHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -CCc-cccC----HHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 000 1111 134579999999999999999999873
No 219
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=6.6e-36 Score=338.97 Aligned_cols=260 Identities=18% Similarity=0.271 Sum_probs=198.9
Q ss_pred HhccccccccccccceeEEEEEE-CCceEEEEEECCCCCccHHHHHHHHHHhhhcc-CCcceEEeeEEecC-CCceEEEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACY-NDGMVLSIRRLPDGSLDENLFRKEAEFLGKVR-HRNLTVLRGYYAGA-PDLRLLVY 878 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~-~~~~~lV~ 878 (1099)
.++|++.+.||+|+||.||+|.. .+++.||+|.+.. ...+.+.+|++++++++ ||||+++++++.+. ....++||
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP--VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS--CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc--cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 46799999999999999999987 4689999999864 34577999999999997 99999999999853 44568999
Q ss_pred eecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCC-cEEEeccccccccCCC
Q 047739 879 DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADF-EAHLSDFGLDRLTIPT 957 (1099)
Q Consensus 879 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~-~~kl~DfGla~~~~~~ 957 (1099)
||+++++|.++++. +++..+..++.|+++||+|||+.||+||||||+||+++.++ .+||+|||+++.....
T Consensus 113 e~~~~~~l~~~~~~--------~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 113 EHVNNTDFKQLYQT--------LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp ECCCCCCHHHHGGG--------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred eccCchhHHHHHHh--------CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 99999999998863 78899999999999999999999999999999999999776 8999999999865322
Q ss_pred CCCCccccccccCccccCcccccc-CCCCCcCchhhHHHHHHHHHhCCCCCCCCCc-hhHHHHHHHHhhhccccccccC-
Q 047739 958 PAEASTSTTAVGTLGYVSPEAALT-GETTKESDVYSFGIVLLELLTGKRPVMFTQD-EDIVKWVKKQLQKGQITELLEP- 1034 (1099)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~G~il~elltg~~P~~~~~~-~~~~~~~~~~~~~~~~~~~~d~- 1034 (1099)
.......||..|+|||.+.+ ..++.++||||+||++|||++|+.||..... .+....+..........+.++.
T Consensus 185 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 260 (330)
T 3nsz_A 185 ----QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 260 (330)
T ss_dssp ----CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred ----CccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHh
Confidence 22345679999999999887 6689999999999999999999999954333 2222222222111111111000
Q ss_pred ------------------cccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1035 ------------------GLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1035 ------------------~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
.+............-..+.+++.+||+.||++|||++|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp TCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000000000000123468999999999999999999987
No 220
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.1e-36 Score=341.44 Aligned_cols=247 Identities=21% Similarity=0.339 Sum_probs=176.0
Q ss_pred ccccccccceeEEEEEEC-CceEEEEEECCCCCccHHHHHHHHHHhhhcc-CCcceEEeeEEecCCCceEEEEeecCCCC
Q 047739 808 ENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFRKEAEFLGKVR-HRNLTVLRGYYAGAPDLRLLVYDYMPNGN 885 (1099)
Q Consensus 808 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~lV~e~~~~gs 885 (1099)
.+.||+|+||.||+|.+. +++.||+|.+.. .....+.+|+++++++. ||||+++++++.+ +...|+||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~-~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISK--RMEANTQKEITALKLCEGHPNIVKLHEVFHD-QLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEG--GGHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEECh--hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEc-CCEEEEEEEccCCCc
Confidence 378999999999999986 589999999853 24567889999999997 9999999999985 455699999999999
Q ss_pred HHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCC---cEEEeccccccccCCCCCCCc
Q 047739 886 LGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADF---EAHLSDFGLDRLTIPTPAEAS 962 (1099)
Q Consensus 886 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~---~~kl~DfGla~~~~~~~~~~~ 962 (1099)
|.+++... ..+++..+..++.|+++||+|||+.||+||||||+||+++.++ .+||+|||+++.... ...
T Consensus 93 L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~---~~~ 164 (325)
T 3kn6_A 93 LFERIKKK-----KHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP---DNQ 164 (325)
T ss_dssp HHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred HHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCC---CCC
Confidence 99999853 3489999999999999999999999999999999999997665 899999999986422 222
Q ss_pred cccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchh---HHHHHHHHhhhccccccccCcccCC
Q 047739 963 TSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDED---IVKWVKKQLQKGQITELLEPGLLEL 1039 (1099)
Q Consensus 963 ~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~~~ 1039 (1099)
.....+||..|+|||++.+..++.++||||+|+++|||++|+.||....... ....+...+..+...
T Consensus 165 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~---------- 234 (325)
T 3kn6_A 165 PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFS---------- 234 (325)
T ss_dssp -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCC----------
T ss_pred cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCC----------
Confidence 3345678999999999999999999999999999999999999997543311 111222222222111
Q ss_pred CCCChhHHH-HHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1040 DPESSEWEE-FLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1040 ~~~~~~~~~-~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
.....+.. -..+.+++.+||+.||++|||++|+++.
T Consensus 235 -~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 235 -FEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp -CCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred -CCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 01111111 1234689999999999999999998753
No 221
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=332.87 Aligned_cols=256 Identities=20% Similarity=0.255 Sum_probs=200.7
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCC-----ccHHHHHHHHHHhhhccCCcceEEeeEEec-CCCce
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS-----LDENLFRKEAEFLGKVRHRNLTVLRGYYAG-APDLR 874 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~ 874 (1099)
.++|.+.+.||+|+||.||+|... ++..||+|.+.... ...+.+.+|++++++++||||+++++++.. +....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999975 58899999986432 234679999999999999999999999853 34456
Q ss_pred EEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccccc
Q 047739 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLT 954 (1099)
Q Consensus 875 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~ 954 (1099)
++||||+++| |.+++... ....+++..+..++.|+++||+|||+.+|+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSV---PEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHS---TTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhC---cccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999876 77877653 2345899999999999999999999999999999999999999999999999999865
Q ss_pred CCCCCCCccccccccCccccCccccccCC--CCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccc
Q 047739 955 IPTPAEASTSTTAVGTLGYVSPEAALTGE--TTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELL 1032 (1099)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1099)
.+. ..........||..|+|||++.+.. ++.++||||+|+++|||++|+.||...........+.. +... .
T Consensus 160 ~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~----~~~~--~ 232 (305)
T 2wtk_C 160 HPF-AADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGK----GSYA--I 232 (305)
T ss_dssp CTT-CSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH----CCCC--C
T ss_pred Ccc-ccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhc----CCCC--C
Confidence 322 1223334567999999999987644 37799999999999999999999987665544443332 1110 0
Q ss_pred cCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH--hhcc
Q 047739 1033 EPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM--LEGC 1080 (1099)
Q Consensus 1033 d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~--L~~~ 1080 (1099)
. .... ..+.+++.+||+.||++|||++|+++. +.+.
T Consensus 233 ~--------~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~ 270 (305)
T 2wtk_C 233 P--------GDCG----PPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKK 270 (305)
T ss_dssp C--------SSSC----HHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSC
T ss_pred C--------CccC----HHHHHHHHHHccCChhhCCCHHHHhcCcccccC
Confidence 0 0011 123578999999999999999999964 5444
No 222
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.7e-35 Score=347.52 Aligned_cols=200 Identities=24% Similarity=0.337 Sum_probs=165.3
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCC---ccHHHHHHHHHHhhhccCCcceEEeeEEecCC----Cc
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS---LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAP----DL 873 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~ 873 (1099)
.++|.+.+.||+|+||.||+|.+. +++.||+|++.... ...+.+.+|++++++++||||+++++++.... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 468999999999999999999976 58899999996532 23467889999999999999999999987543 45
Q ss_pred eEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccc
Q 047739 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRL 953 (1099)
Q Consensus 874 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~ 953 (1099)
.|+||||++ |+|.+++... ..+++..+..++.||++||+|||+.||+||||||+||+++.++.+||+|||+|+.
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTP-----IFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEecCC-cCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 799999996 6999999742 3489999999999999999999999999999999999999999999999999986
Q ss_pred cCCCCCC-------------------CccccccccCccccCcccc-ccCCCCCcCchhhHHHHHHHHHhCCCCC
Q 047739 954 TIPTPAE-------------------ASTSTTAVGTLGYVSPEAA-LTGETTKESDVYSFGIVLLELLTGKRPV 1007 (1099)
Q Consensus 954 ~~~~~~~-------------------~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DV~S~G~il~elltg~~P~ 1007 (1099)
....... .......+||++|+|||++ ....++.++||||+||++|||++|..||
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 5322111 0123567899999999986 4566999999999999999999854444
No 223
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2.9e-36 Score=342.26 Aligned_cols=247 Identities=21% Similarity=0.354 Sum_probs=202.9
Q ss_pred HhccccccccccccceeEEEEEECC-ceEEEEEECCCCC----ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGS----LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLL 876 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 876 (1099)
.++|...+.||+|+||.||++.+.+ ++.||+|.+.... ...+.+.+|++++++++||||+++++++.+ .+..++
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~l 118 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED-NDFVFV 118 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CCeEEE
Confidence 4689999999999999999999864 7899999985432 234678899999999999999999999985 456799
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCC
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIP 956 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 956 (1099)
||||+++++|.+++... ..+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++....
T Consensus 119 v~e~~~~~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 193 (335)
T 2owb_A 119 VLELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 193 (335)
T ss_dssp EECCCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EEecCCCCCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceeccc
Confidence 99999999999998753 3489999999999999999999999999999999999999999999999999986522
Q ss_pred CCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcc
Q 047739 957 TPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGL 1036 (1099)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1036 (1099)
. ........||..|+|||++.+..++.++||||||+++|||++|+.||......+....+... ...+. .
T Consensus 194 ~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~--~~~~~----~-- 262 (335)
T 2owb_A 194 D---GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIP----K-- 262 (335)
T ss_dssp T---TCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT--CCCCC----T--
T ss_pred C---cccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcC--CCCCC----c--
Confidence 1 22334567999999999999989999999999999999999999999876554443333221 00000 0
Q ss_pred cCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1037 LELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
. .. ..+.+++.+||+.||++||++.|+++
T Consensus 263 -----~-~~----~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 263 -----H-IN----PVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp -----T-SC----HHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred -----c-CC----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0 01 12357899999999999999999997
No 224
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=3.4e-36 Score=341.62 Aligned_cols=252 Identities=18% Similarity=0.274 Sum_probs=197.2
Q ss_pred HHhccccccccccccceeEEEEEEC-CceEEEEEECCCCCccHHHHHHHHHHhhhc-cCCcceEEeeEEecCCCceEEEE
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFRKEAEFLGKV-RHRNLTVLRGYYAGAPDLRLLVY 878 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV~ 878 (1099)
..++|+..+.||+|+||.||+|..+ +|+.||+|.+..... ...+|++++.++ +||||+++++++.+ +...|+||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~-~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDD-GKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEEC-SSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEc-CCEEEEEE
Confidence 4678999999999999999999986 589999999865432 346788999888 79999999999984 45679999
Q ss_pred eecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCC----CcEEEecccccccc
Q 047739 879 DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDAD----FEAHLSDFGLDRLT 954 (1099)
Q Consensus 879 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~----~~~kl~DfGla~~~ 954 (1099)
||+++|+|.+++... ..+++.....++.||+.||+|||+.||+||||||+||++..+ +.+||+|||+++..
T Consensus 96 E~~~gg~L~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 96 ELMKGGELLDKILRQ-----KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp CCCCSCBHHHHHHTC-----TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred eCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 999999999999742 348999999999999999999999999999999999998433 35999999999865
Q ss_pred CCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccC
Q 047739 955 IPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEP 1034 (1099)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1034 (1099)
... .......+||+.|+|||++.+..++.++||||+||++|||++|+.||......... .+...+..+... ....
T Consensus 171 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~-~~~~~i~~~~~~-~~~~ 245 (342)
T 2qr7_A 171 RAE---NGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPE-EILARIGSGKFS-LSGG 245 (342)
T ss_dssp BCT---TCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHH-HHHHHHHHCCCC-CCST
T ss_pred cCC---CCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHH-HHHHHHccCCcc-cCcc
Confidence 321 22334568999999999998888899999999999999999999999764332222 222222222211 0000
Q ss_pred cccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1035 GLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
.+.. .. ..+.+++.+||+.||++||++.|+++
T Consensus 246 ~~~~-----~s----~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 246 YWNS-----VS----DTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp TTTT-----SC----HHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred cccc-----CC----HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0000 00 12457899999999999999999986
No 225
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=6.5e-36 Score=342.83 Aligned_cols=260 Identities=22% Similarity=0.330 Sum_probs=187.5
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCc---cHHHHHHHHHHhhhccCCcceEEeeEEecC-----CC
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL---DENLFRKEAEFLGKVRHRNLTVLRGYYAGA-----PD 872 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~ 872 (1099)
.++|...+.||+|+||.||+|... +|+.||+|++..... ..+.+.+|++++++++||||+++++++... ..
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 468999999999999999999874 589999999965322 346788999999999999999999998643 24
Q ss_pred ceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccc
Q 047739 873 LRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR 952 (1099)
Q Consensus 873 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~ 952 (1099)
..|+|+||+ +++|.++++. ..+++..+..++.||++||+|||+.||+||||||+||+++.++.+||+|||+++
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp CCEEEEECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC-----
T ss_pred eEEEEeccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 468999999 6899988864 348999999999999999999999999999999999999999999999999997
Q ss_pred ccCCCCCCCccccccccCccccCcccccc-CCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhcccc--
Q 047739 953 LTIPTPAEASTSTTAVGTLGYVSPEAALT-GETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQIT-- 1029 (1099)
Q Consensus 953 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~-- 1029 (1099)
... ......+||..|+|||++.+ ..++.++||||+||++|||++|+.||.+.+..+....+.+........
T Consensus 181 ~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~ 254 (367)
T 2fst_X 181 HTA------DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 254 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred ccc------ccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 642 12345689999999999887 678999999999999999999999998877766665555443221100
Q ss_pred -cccc-------CcccCCCCCChhHHHH-----HHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1030 -ELLE-------PGLLELDPESSEWEEF-----LLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1030 -~~~d-------~~~~~~~~~~~~~~~~-----~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
.... ..+.... ...+... ..+.+++.+||+.||++|||+.|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 255 KKISSESARNYIQSLTQMP--KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp TTCCCHHHHHHHHTSCCCC--CCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHhhhHHHHHHHhccCCCC--CCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0000 0000000 0011111 234689999999999999999999874
No 226
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=3.1e-36 Score=346.37 Aligned_cols=272 Identities=20% Similarity=0.279 Sum_probs=204.3
Q ss_pred CHHHHHHHHhccccccccccccceeEEEEEECCceEEEEEECCCCCcc------------HHHHHHHHHHhhhccCCcce
Q 047739 794 TLAETVEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLD------------ENLFRKEAEFLGKVRHRNLT 861 (1099)
Q Consensus 794 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~------------~~~~~~E~~~l~~l~H~niv 861 (1099)
..++.....++|...+.||+|+||.||+|...+|..||+|++...... .+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 355677788999999999999999999999988999999998532211 26789999999999999999
Q ss_pred EEeeEEecC----CCceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEE
Q 047739 862 VLRGYYAGA----PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLF 937 (1099)
Q Consensus 862 ~l~~~~~~~----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll 937 (1099)
++++++... ....++||||++ |+|.+++... ...+++..+..++.|++.||+|||+.||+||||||+||++
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ----RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL 167 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEE
Confidence 999998532 235689999997 6888888742 3458999999999999999999999999999999999999
Q ss_pred CCCCcEEEeccccccccCCCCCCCccccccccCccccCcccccc-CCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHH
Q 047739 938 DADFEAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALT-GETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIV 1016 (1099)
Q Consensus 938 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~ 1016 (1099)
+.++.+||+|||+++... .........||..|+|||++.+ ..++.++||||+||++|||++|+.||......+..
T Consensus 168 ~~~~~~kl~Dfg~~~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~ 243 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDT----ADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243 (362)
T ss_dssp CTTCCEEECCTTC-------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred cCCCCEEEEecCcccccc----cccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 999999999999997542 1223345678999999999877 67899999999999999999999999887766655
Q ss_pred HHHHHHhhhccccc-----------cccCcccCCCCCChhHHH-----HHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1017 KWVKKQLQKGQITE-----------LLEPGLLELDPESSEWEE-----FLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1017 ~~~~~~~~~~~~~~-----------~~d~~~~~~~~~~~~~~~-----~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
..+........... ........... ..+.. -..+.+++.+||+.||++|||+.|+++.
T Consensus 244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPA--RAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCC--CCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHcCCCChHHhhhccchhhhHHHHhhcccCCh--hhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 55544333221111 01111111100 01111 1234689999999999999999999973
No 227
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=6.7e-36 Score=346.62 Aligned_cols=269 Identities=20% Similarity=0.308 Sum_probs=200.1
Q ss_pred HhccccccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecCCC-----ceEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPD-----LRLL 876 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-----~~~l 876 (1099)
..+|...++||+|+||.||+|++.++..||+|++.... +...+|++++++++||||+++++++..... ..++
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~---~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK---RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT---TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc---chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 34799999999999999999999877778888875432 223479999999999999999999864322 2579
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEEC-CCCcEEEeccccccccC
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFD-ADFEAHLSDFGLDRLTI 955 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~-~~~~~kl~DfGla~~~~ 955 (1099)
||||+++ ++.+.+..... ....+++..+..++.||++||+|||+.||+||||||+||+++ .++.+||+|||+|+...
T Consensus 116 v~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~ 193 (394)
T 4e7w_A 116 VLEYVPE-TVYRASRHYAK-LKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193 (394)
T ss_dssp EEECCSE-EHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred EeeccCc-cHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence 9999986 45444433221 234589999999999999999999999999999999999999 79999999999998652
Q ss_pred CCCCCCccccccccCccccCccccccC-CCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccc------
Q 047739 956 PTPAEASTSTTAVGTLGYVSPEAALTG-ETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQI------ 1028 (1099)
Q Consensus 956 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~------ 1028 (1099)
.. ......+||+.|+|||++.+. .++.++||||+||++|||++|+.||.+....+....+.+.......
T Consensus 194 ~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~ 269 (394)
T 4e7w_A 194 AG----EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTM 269 (394)
T ss_dssp TT----CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred CC----CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 22 223456789999999998765 5899999999999999999999999887766555554443221110
Q ss_pred -cccccCcccCCCCCChhHHH------HHHHHHHHHhcCCCCCCCCCCHHHHHHH--hhccc
Q 047739 1029 -TELLEPGLLELDPESSEWEE------FLLGVKVALLCTAPDPIDRPTMSDIVFM--LEGCR 1081 (1099)
Q Consensus 1029 -~~~~d~~~~~~~~~~~~~~~------~~~~~~li~~Cl~~dP~~RPs~~evl~~--L~~~~ 1081 (1099)
.......+.... ...+.. -..+.+++.+||+.||++|||+.|+++. ++++.
T Consensus 270 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (394)
T 4e7w_A 270 NPNYMEHKFPQIR--PHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR 329 (394)
T ss_dssp CGGGSSSCCCCCC--CCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred Chhhhhhcccccc--CCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence 001111111100 011111 1235689999999999999999999974 55443
No 228
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=3e-36 Score=358.90 Aligned_cols=254 Identities=22% Similarity=0.294 Sum_probs=201.0
Q ss_pred hccccccccccccceeEEEEEEC-CceEEEEEECCCCC----ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEE
Q 047739 803 RQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS----LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLV 877 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 877 (1099)
++|...++||+|+||.||+|+.+ +|+.||+|++.... ...+.+.+|++++++++||||+++++++.. ....|+|
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-~~~l~lV 263 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET-KTDLCLV 263 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEee-CCEEEEE
Confidence 67888999999999999999986 58999999985422 234668899999999999999999999885 4557999
Q ss_pred EeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCC
Q 047739 878 YDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPT 957 (1099)
Q Consensus 878 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 957 (1099)
|||+++|+|.+++..... ....+++.....++.||+.||+|||+.||+||||||+||+++.++.+||+|||+++.....
T Consensus 264 mE~~~gg~L~~~l~~~~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~ 342 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG 342 (543)
T ss_dssp ECCCTTCBHHHHHHTSST-TSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEeccCCCHHHHHHHhhc-ccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCC
Confidence 999999999999975322 2345899999999999999999999999999999999999999999999999999865221
Q ss_pred CCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCccc
Q 047739 958 PAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLL 1037 (1099)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1037 (1099)
.......+||+.|+|||++.+..++.++||||+||++|||++|+.||...........+.+.+...... ..+.+
T Consensus 343 ---~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~--~p~~~- 416 (543)
T 3c4z_A 343 ---QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVT--YPDKF- 416 (543)
T ss_dssp ---CCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCC--CCTTS-
T ss_pred ---CcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccC--CCccc-
Confidence 222344689999999999999999999999999999999999999997653321122222222222110 00111
Q ss_pred CCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCH-----HHHHH
Q 047739 1038 ELDPESSEWEEFLLGVKVALLCTAPDPIDRPTM-----SDIVF 1075 (1099)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~-----~evl~ 1075 (1099)
. ..+.+++.+||+.||++||++ .||.+
T Consensus 417 -------s----~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 417 -------S----PASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp -------C----HHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred -------C----HHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 1 123578999999999999975 66653
No 229
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=5.8e-36 Score=335.14 Aligned_cols=250 Identities=23% Similarity=0.362 Sum_probs=201.8
Q ss_pred HHhccccccccccccceeEEEEEEC-CceEEEEEECCCCC-ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEE
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS-LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVY 878 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 878 (1099)
..++|...+.||+|+||.||+|... +|+.||+|.+.... ...+.+.+|++++++++||||+++++++.+ ....++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~ 85 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYES-TTHYYLVM 85 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhccc-CCEEEEEE
Confidence 4578999999999999999999986 68999999986543 234678999999999999999999999985 45569999
Q ss_pred eecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEE---CCCCcEEEeccccccccC
Q 047739 879 DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLF---DADFEAHLSDFGLDRLTI 955 (1099)
Q Consensus 879 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll---~~~~~~kl~DfGla~~~~ 955 (1099)
||+++|+|.+++... ..+++..+..++.|++.||+|||+.||+||||||+||++ +.++.+||+|||+++...
T Consensus 86 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 160 (304)
T 2jam_A 86 QLVSGGELFDRILER-----GVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ 160 (304)
T ss_dssp CCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred EcCCCccHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence 999999999999753 248899999999999999999999999999999999999 788999999999987541
Q ss_pred CCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCc
Q 047739 956 PTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPG 1035 (1099)
Q Consensus 956 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1035 (1099)
........||+.|+|||++.+..++.++||||+|+++|||++|+.||...........+...... ...+.
T Consensus 161 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~-----~~~~~ 230 (304)
T 2jam_A 161 -----NGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYE-----FESPF 230 (304)
T ss_dssp -----CBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCC-----CCTTT
T ss_pred -----CCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC-----CCccc
Confidence 12234457999999999999989999999999999999999999999876655544444332110 00000
Q ss_pred ccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1036 LLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
.. . .+ ..+.+++.+||+.||++||++.|+++
T Consensus 231 ~~----~-~~----~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 231 WD----D-IS----ESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp TT----T-SC----HHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cc----c-CC----HHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00 0 01 13457999999999999999999987
No 230
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=4.4e-36 Score=334.46 Aligned_cols=248 Identities=20% Similarity=0.347 Sum_probs=202.4
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCC----ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS----LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLL 876 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 876 (1099)
.++|...+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|++++++++||||+++++++.+ .+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~l 92 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED-NDFVFV 92 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeecc-CCEEEE
Confidence 467999999999999999999986 47889999885432 234678899999999999999999999985 455699
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCC
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIP 956 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 956 (1099)
||||+++++|.+++... ..+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++....
T Consensus 93 v~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 167 (294)
T 2rku_A 93 VLELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 167 (294)
T ss_dssp EEECCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence 99999999999998753 2489999999999999999999999999999999999999999999999999976522
Q ss_pred CCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcc
Q 047739 957 TPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGL 1036 (1099)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1036 (1099)
. ........||..|+|||.+.+..++.++||||+|+++|||++|+.||......+....+.. .... ...
T Consensus 168 ~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~----~~~~--~~~-- 236 (294)
T 2rku_A 168 D---GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK----NEYS--IPK-- 236 (294)
T ss_dssp T---TCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT----TCCC--CCT--
T ss_pred C---ccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhh----ccCC--Ccc--
Confidence 1 2223446799999999999988899999999999999999999999987655443332221 1100 000
Q ss_pred cCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1037 LELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
. .+ ..+.+++.+||+.||++|||++|+++.
T Consensus 237 -----~-~~----~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 237 -----H-IN----PVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp -----T-SC----HHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -----c-cC----HHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0 01 124578999999999999999999973
No 231
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-36 Score=345.81 Aligned_cols=254 Identities=23% Similarity=0.335 Sum_probs=199.2
Q ss_pred HhccccccccccccceeEEEEEE----CCceEEEEEECCCCC-----ccHHHHHHHHHHhhhc-cCCcceEEeeEEecCC
Q 047739 802 TRQFDEENVLSRTRYGLVFKACY----NDGMVLSIRRLPDGS-----LDENLFRKEAEFLGKV-RHRNLTVLRGYYAGAP 871 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~-----~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 871 (1099)
.++|++.++||+|+||.||+|+. .+|+.||+|++.... ...+.+.+|+++++++ +||||+++++++...
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~- 131 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE- 131 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET-
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeC-
Confidence 46899999999999999999998 368999999986432 2345678899999999 699999999998854
Q ss_pred CceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccc
Q 047739 872 DLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLD 951 (1099)
Q Consensus 872 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla 951 (1099)
...++||||+++|+|.+++... ..+++..+..++.||++||+|||+.+|+||||||+||+++.++.+||+|||++
T Consensus 132 ~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 132 TKLHLILDYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp TEEEEEECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred ceEEEEeecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 4569999999999999999753 24889999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCccccccccCccccCcccccc--CCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhcccc
Q 047739 952 RLTIPTPAEASTSTTAVGTLGYVSPEAALT--GETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQIT 1029 (1099)
Q Consensus 952 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 1029 (1099)
+.... .........+||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+..........
T Consensus 207 ~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 284 (355)
T 1vzo_A 207 KEFVA--DETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP 284 (355)
T ss_dssp EECCG--GGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCC
T ss_pred eeccc--CCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCC
Confidence 76421 12223345679999999999985 347899999999999999999999997544332222222222211100
Q ss_pred ccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHHHh
Q 047739 1030 ELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRP-----TMSDIVFML 1077 (1099)
Q Consensus 1030 ~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RP-----s~~evl~~L 1077 (1099)
..+ .. . ..+.+++.+||+.||++|| ++.|+++..
T Consensus 285 --~~~-------~~-~----~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 285 --YPQ-------EM-S----ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp --CCT-------TS-C----HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred --CCc-------cc-C----HHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 000 10 0 1245789999999999999 999998754
No 232
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=6.6e-36 Score=349.52 Aligned_cols=269 Identities=23% Similarity=0.346 Sum_probs=200.6
Q ss_pred hccccccccccccceeEEEEEEC-CceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecC-----CCceEE
Q 047739 803 RQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA-----PDLRLL 876 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~~l 876 (1099)
.+|+..++||+|+||.||+|.+. +|+.||+|++.... +.+.+|++++++++|||||++++++... ....++
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 46899999999999999999986 58999999985432 2345799999999999999999988532 123469
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCC-CcEEEeccccccccC
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDAD-FEAHLSDFGLDRLTI 955 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~-~~~kl~DfGla~~~~ 955 (1099)
||||+++ ++.+.+..... ....+++..+..++.||++||+|||+.||+||||||+|||++.+ +.+||+|||+++...
T Consensus 131 v~e~~~~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~ 208 (420)
T 1j1b_A 131 VLDYVPE-TVYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208 (420)
T ss_dssp EEECCCE-EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred ehhcccc-cHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence 9999975 77777664322 33568999999999999999999999999999999999999965 678999999998652
Q ss_pred CCCCCCccccccccCccccCccccccC-CCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccc--cc
Q 047739 956 PTPAEASTSTTAVGTLGYVSPEAALTG-ETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITE--LL 1032 (1099)
Q Consensus 956 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~--~~ 1032 (1099)
.. ......+||..|+|||++.+. .++.++||||+||++|||++|+.||......+....+.+......... ..
T Consensus 209 ~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~ 284 (420)
T 1j1b_A 209 RG----EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 284 (420)
T ss_dssp TT----CCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred cC----CCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 21 223346789999999998765 689999999999999999999999987766554444443322111000 00
Q ss_pred cCcccCC---CCCChhHHHH------HHHHHHHHhcCCCCCCCCCCHHHHHH--Hhhcc
Q 047739 1033 EPGLLEL---DPESSEWEEF------LLGVKVALLCTAPDPIDRPTMSDIVF--MLEGC 1080 (1099)
Q Consensus 1033 d~~~~~~---~~~~~~~~~~------~~~~~li~~Cl~~dP~~RPs~~evl~--~L~~~ 1080 (1099)
.+.+.++ ......|... ..+.+++.+||+.||++||++.|+++ .++++
T Consensus 285 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~ 343 (420)
T 1j1b_A 285 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 343 (420)
T ss_dssp CSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred ChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccc
Confidence 1111110 0011122211 24568999999999999999999986 44444
No 233
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1e-37 Score=360.30 Aligned_cols=244 Identities=17% Similarity=0.154 Sum_probs=187.9
Q ss_pred HhccccccccccccceeEEEEEE-CCceEEEEEECCC----CCccHHHHHHHH---HHhhhccCCcceEEe-------eE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACY-NDGMVLSIRRLPD----GSLDENLFRKEA---EFLGKVRHRNLTVLR-------GY 866 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~----~~~~~~~~~~E~---~~l~~l~H~niv~l~-------~~ 866 (1099)
.++|...+.||+|+||.||+|.+ .+|+.||+|++.. .....+.+.+|+ +.+++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46789999999999999999997 4689999999852 223457789999 555566899999998 55
Q ss_pred EecCCC----------------ceEEEEeecCCCCHHHHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHccCCceec
Q 047739 867 YAGAPD----------------LRLLVYDYMPNGNLGTLLQEASHQD--GHVLNWPMRHLIALGVARGLAFLHTSNMVHG 928 (1099)
Q Consensus 867 ~~~~~~----------------~~~lV~e~~~~gsL~~~l~~~~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~ 928 (1099)
+...+. ..|+||||+ +|+|.+++....... ...+++..++.|+.||++||+|||+.||+||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHr 230 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT 230 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 553321 258999999 689999998643322 1345568888999999999999999999999
Q ss_pred CCCCCCEEECCCCcEEEeccccccccCCCCCCCccccccccCccccCccccccC-----------CCCCcCchhhHHHHH
Q 047739 929 DIKPQNVLFDADFEAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTG-----------ETTKESDVYSFGIVL 997 (1099)
Q Consensus 929 Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DV~S~G~il 997 (1099)
||||+||+++.++.+||+|||+|+.. .......+| ..|+|||++.+. .++.++|||||||++
T Consensus 231 Dikp~NIll~~~~~~kL~DFG~a~~~------~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il 303 (377)
T 3byv_A 231 YLRPVDIVLDQRGGVFLTGFEHLVRD------GARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI 303 (377)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEET------TCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH
T ss_pred CCCHHHEEEcCCCCEEEEechhheec------CCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHH
Confidence 99999999999999999999999853 123345577 999999999887 799999999999999
Q ss_pred HHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 998 LELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 998 ~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
|||++|+.||........... ....... . + ..+.+++.+||+.||++||++.|+++
T Consensus 304 ~elltg~~Pf~~~~~~~~~~~-------------~~~~~~~---~--~----~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 304 YWIWCADLPITKDAALGGSEW-------------IFRSCKN---I--P----QPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHSSCCC------CCSGG-------------GGSSCCC---C--C----HHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHCCCCCcccccccchhh-------------hhhhccC---C--C----HHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 999999999965432211110 0010000 0 1 12457899999999999999999986
No 234
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.6e-35 Score=342.11 Aligned_cols=346 Identities=19% Similarity=0.205 Sum_probs=214.9
Q ss_pred CCCCCCCCCCCC-CcccceEecCCcEeEEecCCCccccccccccccccccceEEccCCccCcccCc-ccccCCcccEEEe
Q 047739 44 LNGWDSSTPAAP-CDWRGVACTNNRVTELRLPRLQLSGRISDHLSNLRMLRKLSLRSNSFNGTIPA-TLAQCTLLRAVFL 121 (1099)
Q Consensus 44 l~~w~~~~~~~~-c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~-~~~~l~~L~~L~l 121 (1099)
+++|.+..+ | |.|.+..|... .+.+..........+.-..++.|+.|++++|.+.. +|. .+..+++|++|+|
T Consensus 3 ~~~~~~~~~--C~~~~~~~~c~~~---~~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~-l~~~~~~~l~~L~~L~L 76 (390)
T 3o6n_A 3 VKPRQPEYK--CIDSNLQYDCVFY---DVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRK-LPAALLDSFRQVELLNL 76 (390)
T ss_dssp ----CCEEC--BCC------EEEE---SCEECSSCCCCEESCSSGGGCCCSEEEEESCEESE-ECTHHHHHCCCCSEEEC
T ss_pred cCCCCCccc--eehhhhhhcccee---eeeeecccccccccccccccCCceEEEecCCchhh-CChhHhcccccCcEEEC
Confidence 578987543 4 45766666521 11122222233333444568999999999999884 554 4789999999999
Q ss_pred ccccCCCccCcccccCCCCceeecccccCCCcccCCcc--cccceeeCCCCccCCCCCCCCccccccccccccccccccc
Q 047739 122 QYNSLSGNLPANIGNLSNLEILNVAANRLSGEIANDLP--RNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSRE 199 (1099)
Q Consensus 122 ~~n~l~g~~p~~~~~l~~L~~L~ls~N~l~~~i~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 199 (1099)
++|++++..|..++.+++|++|+|++|.+++..|..+. ++|++|+|++|+++...+..|+++++|++|++++|++++
T Consensus 77 ~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~- 155 (390)
T 3o6n_A 77 NDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLER- 155 (390)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCB-
T ss_pred CCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCc-
Confidence 99999988888999999999999999999987776665 788889999998885544557888889999998888873
Q ss_pred cccccccccCccccccCceeEEEccCCcCCccChhhhcCCCCccEEEcccccCCCccCcccccccCCCCCcceEEEeccc
Q 047739 200 VPATFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFN 279 (1099)
Q Consensus 200 ~~~~~~g~lp~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n 279 (1099)
..|..++.+++|++|++++|++++.. ++.+++|++|++++|.+++. ..++.++.+++++|
T Consensus 156 -------~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~~~----------~~~~~L~~L~l~~n 215 (390)
T 3o6n_A 156 -------IEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTL----------AIPIAVEELDASHN 215 (390)
T ss_dssp -------CCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCCSEE----------ECCSSCSEEECCSS
T ss_pred -------cChhhccCCCCCCEEECCCCcCCccc---cccccccceeeccccccccc----------CCCCcceEEECCCC
Confidence 33445667888888888888888653 55678888888888887632 12345566666666
Q ss_pred cccccCCCCCCCCCCceeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCC
Q 047739 280 AFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVP 359 (1099)
Q Consensus 280 ~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~ 359 (1099)
.+..++... .++|+.|+|++|++++. .++..+++|++|+|++|.+++..|..|.++++|++|+|++|++++ ++
T Consensus 216 ~l~~~~~~~----~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~ 288 (390)
T 3o6n_A 216 SINVVRGPV----NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LN 288 (390)
T ss_dssp CCCEEECCC----CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EE
T ss_pred eeeeccccc----cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cC
Confidence 555554321 24555555555555542 345555555555555555555555555555555555555555553 23
Q ss_pred ccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCc
Q 047739 360 VEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLS 427 (1099)
Q Consensus 360 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 427 (1099)
..+..+++|++|+|++|+++ .+|..+..+++|++|++++|.++... +..+++|+.|++++|.+.
T Consensus 289 ~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~---~~~~~~L~~L~l~~N~~~ 352 (390)
T 3o6n_A 289 LYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWD 352 (390)
T ss_dssp CSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEE
T ss_pred cccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeC---chhhccCCEEEcCCCCcc
Confidence 33444555555555555555 34444444445555555555444321 333444444444444443
No 235
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.1e-35 Score=332.16 Aligned_cols=263 Identities=22% Similarity=0.341 Sum_probs=201.3
Q ss_pred hccccccccccccceeEEEEEEC-CceEEEEEECCCCCcc---HHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEE
Q 047739 803 RQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLD---ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVY 878 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 878 (1099)
++|+..+.||+|+||.||+|... +|+.||+|.+...... .+.+.+|++++++++||||+++++++... +..++||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~lv~ 81 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVF 81 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEET-TEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecC-CceEEEE
Confidence 57899999999999999999986 6899999998654322 36788999999999999999999999854 4569999
Q ss_pred eecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCC
Q 047739 879 DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTP 958 (1099)
Q Consensus 879 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 958 (1099)
||++ |+|.+++.... ...+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++....
T Consensus 82 e~~~-~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~-- 155 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASA---LTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-- 155 (299)
T ss_dssp ECCS-EEHHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCC--
T ss_pred Eccc-CCHHHHHHhhh---ccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccC--
Confidence 9997 69999997532 23488999999999999999999999999999999999999999999999999976421
Q ss_pred CCCccccccccCccccCccccccCC-CCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCccc
Q 047739 959 AEASTSTTAVGTLGYVSPEAALTGE-TTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLL 1037 (1099)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1037 (1099)
.........||..|+|||.+.+.. ++.++||||+|+++|||++|+.||......+....+.+..... .+...+...
T Consensus 156 -~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 232 (299)
T 2r3i_A 156 -PVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVVWPGVT 232 (299)
T ss_dssp -CSBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC--CTTTSTTGG
T ss_pred -CccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCC--chhhhhHhh
Confidence 122234457899999999988765 7899999999999999999999998776655554444432211 111100000
Q ss_pred C-------CCC-CChhHHH-----HHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1038 E-------LDP-ESSEWEE-----FLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1038 ~-------~~~-~~~~~~~-----~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
. +.. ....... -..+.+++.+|++.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp GSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0 000 0000000 023468999999999999999999998
No 236
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.1e-35 Score=342.25 Aligned_cols=263 Identities=19% Similarity=0.221 Sum_probs=193.9
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCc---cHHHHHHHHHHhhhccCCcceEEeeEEecCC-----C
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL---DENLFRKEAEFLGKVRHRNLTVLRGYYAGAP-----D 872 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~ 872 (1099)
.++|...+.||+|+||.||+|... +++.||+|++..... ..+.+.+|++++++++||||+++++++.... .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 467999999999999999999875 589999999864322 2356889999999999999999999987543 2
Q ss_pred ceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccc
Q 047739 873 LRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR 952 (1099)
Q Consensus 873 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~ 952 (1099)
..++||||++ |+|.+++.. .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 175 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175 (371)
T ss_dssp EEEEEEECCS-EEHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred ceEEEEEcCC-CCHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccc
Confidence 5699999997 578888852 37899999999999999999999999999999999999999999999999997
Q ss_pred ccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccc----
Q 047739 953 LTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQI---- 1028 (1099)
Q Consensus 953 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~---- 1028 (1099)
.... .......+||..|+|||++.+..++.++||||+||++|||++|+.||...+..+....+.........
T Consensus 176 ~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 251 (371)
T 2xrw_A 176 TAGT----SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 251 (371)
T ss_dssp ------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHT
T ss_pred cccc----ccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 5421 22234568999999999999999999999999999999999999999877665544443322111000
Q ss_pred ------cccc--cCccc-----------CCCCCChh-HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1029 ------TELL--EPGLL-----------ELDPESSE-WEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1029 ------~~~~--d~~~~-----------~~~~~~~~-~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
.... .+.+. ..+..... ...-..+.+++.+||+.||++|||++|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 252 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp TSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0000 00000 00001111 1112346789999999999999999999873
No 237
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=5.6e-36 Score=343.86 Aligned_cols=203 Identities=24% Similarity=0.412 Sum_probs=174.6
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCC--ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS--LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVY 878 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 878 (1099)
.++|+..+.||+|+||.||+|.+. ++..||+|.+.... ...+.+.+|++++++++||||+++++++... ...++||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~lv~ 110 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-GEISICM 110 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEET-TEEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEEC-CEEEEEE
Confidence 357999999999999999999986 58899999986542 2346789999999999999999999999854 5569999
Q ss_pred eecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccC-CceecCCCCCCEEECCCCcEEEeccccccccCCC
Q 047739 879 DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTS-NMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPT 957 (1099)
Q Consensus 879 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 957 (1099)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++....
T Consensus 111 e~~~~~~L~~~l~~~~-----~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~- 184 (360)
T 3eqc_A 111 EHMDGGSLDQVLKKAG-----RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID- 184 (360)
T ss_dssp CCCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH-
T ss_pred ECCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCccccc-
Confidence 9999999999998642 488999999999999999999996 999999999999999999999999999865411
Q ss_pred CCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhH
Q 047739 958 PAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDI 1015 (1099)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~ 1015 (1099)
.......||+.|+|||++.+..++.++||||+|+++|||++|+.||......+.
T Consensus 185 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 238 (360)
T 3eqc_A 185 ----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 238 (360)
T ss_dssp ----HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHH
T ss_pred ----ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 123345799999999999999999999999999999999999999987655443
No 238
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=4.6e-36 Score=358.66 Aligned_cols=250 Identities=22% Similarity=0.307 Sum_probs=204.4
Q ss_pred HHhccccccccccccceeEEEEEEC-CceEEEEEECCCC----CccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceE
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDG----SLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 875 (1099)
..++|+..++||+|+||.||+|... +|+.||+|++... ....+.+.+|++++++++||||+++++++.+ ....+
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~ 102 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED-KGYFY 102 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCEEE
Confidence 3568999999999999999999986 6899999998433 3345779999999999999999999999985 45669
Q ss_pred EEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEE---CCCCcEEEecccccc
Q 047739 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLF---DADFEAHLSDFGLDR 952 (1099)
Q Consensus 876 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll---~~~~~~kl~DfGla~ 952 (1099)
+||||+.+|+|.+++... ..+++..+..++.||+.||+|||+.||+||||||+||++ +.++.+||+|||+++
T Consensus 103 lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 103 LVGEVYTGGELFDEIISR-----KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp EEECCCCSCBHHHHHHTC-----SCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 999999999999999742 348999999999999999999999999999999999999 567899999999998
Q ss_pred ccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccc
Q 047739 953 LTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELL 1032 (1099)
Q Consensus 953 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1099)
.... .......+||+.|+|||++.+ .++.++||||+||++|||++|+.||......+....+........
T Consensus 178 ~~~~----~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~----- 247 (484)
T 3nyv_A 178 HFEA----SKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE----- 247 (484)
T ss_dssp HBCC----CCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-----
T ss_pred Eccc----ccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC-----
Confidence 6522 223345679999999998875 689999999999999999999999988776665555443211100
Q ss_pred cCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1033 EPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1033 d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
.+.+.... ..+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~s---------~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 248 LPQWKKVS---------ESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp SGGGGGSC---------HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CcccccCC---------HHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 01111000 12458999999999999999999986
No 239
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.3e-35 Score=355.24 Aligned_cols=250 Identities=22% Similarity=0.301 Sum_probs=199.1
Q ss_pred HHhccccccccccccceeEEEEEEC-CceEEEEEECCCCC---ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEE
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS---LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLL 876 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 876 (1099)
..++|...+.||+|+||.||+|... ++..||+|.+.... .....+.+|++++++++||||+++++++.+ ....|+
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~l 113 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFED-KRNYYL 113 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEEE
Confidence 3567999999999999999999986 58899999985432 234678999999999999999999999985 455699
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECC---CCcEEEeccccccc
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDA---DFEAHLSDFGLDRL 953 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~---~~~~kl~DfGla~~ 953 (1099)
||||+++|+|.+++... ..+++..+..++.||++||+|||+.||+||||||+||+++. ++.+||+|||+++.
T Consensus 114 v~e~~~~g~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 114 VMECYKGGELFDEIIHR-----MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 99999999999998753 34889999999999999999999999999999999999976 45599999999986
Q ss_pred cCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhcccccccc
Q 047739 954 TIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLE 1033 (1099)
Q Consensus 954 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 1033 (1099)
... .......+||+.|+|||++. +.++.++||||+||++|||++|+.||......+....+...... ...
T Consensus 189 ~~~----~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~-----~~~ 258 (494)
T 3lij_A 189 FEN----QKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYT-----FDS 258 (494)
T ss_dssp CBT----TBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC-----CCS
T ss_pred CCC----CccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-----CCc
Confidence 522 22334568999999999876 56999999999999999999999999887766655554432111 011
Q ss_pred CcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1034 PGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
+.+... . ..+.+++.+||+.||++|||+.|+++
T Consensus 259 ~~~~~~---s------~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 259 PEWKNV---S------EGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp GGGTTS---C------HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhcccC---C------HHHHHHHHHHCCCChhhCccHHHHhc
Confidence 111100 0 12457899999999999999999985
No 240
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2.7e-35 Score=333.38 Aligned_cols=267 Identities=23% Similarity=0.297 Sum_probs=206.1
Q ss_pred HHhccccccccccccceeEEEEEE--CCceEEEEEECCCCC---ccHHHHHHHHHHhhhc---cCCcceEEeeEEec---
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACY--NDGMVLSIRRLPDGS---LDENLFRKEAEFLGKV---RHRNLTVLRGYYAG--- 869 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~g~~vavK~~~~~~---~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~--- 869 (1099)
+.++|++.+.||+|+||.||+|.+ .+|+.||+|++.... .....+.+|+++++++ +||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999998 368899999885322 1234577888888877 89999999999862
Q ss_pred -CCCceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecc
Q 047739 870 -APDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDF 948 (1099)
Q Consensus 870 -~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~Df 948 (1099)
.....++||||++ |+|.+++.... ...+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVP---EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSC---TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecC
Confidence 3445689999997 69999997532 234899999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccc
Q 047739 949 GLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQI 1028 (1099)
Q Consensus 949 Gla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 1028 (1099)
|+++... .........||..|+|||++.+..++.++||||+|+++|||++|+.||......+....+.........
T Consensus 165 g~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 240 (326)
T 1blx_A 165 GLARIYS----FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 240 (326)
T ss_dssp CSCCCCC----GGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCG
T ss_pred ccccccc----CCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCc
Confidence 9997642 122344567999999999999999999999999999999999999999887766665555543322111
Q ss_pred ccccc--------------CcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH--Hhhcc
Q 047739 1029 TELLE--------------PGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF--MLEGC 1080 (1099)
Q Consensus 1029 ~~~~d--------------~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~--~L~~~ 1080 (1099)
..... .......+.. + ..+.+++.+||+.||++||++.|+++ .+.++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~ 303 (326)
T 1blx_A 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDI-D----ELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 303 (326)
T ss_dssp GGSCTTCSSCGGGSCCCCCCCGGGTCCSC-C----HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred ccCccccccchhhhcccCcchhhhccccC-C----HHHHHHHHHHcCCCcccCCCHHHHhcCcccccc
Confidence 11000 0000000000 0 12457899999999999999999995 35444
No 241
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.3e-35 Score=356.17 Aligned_cols=251 Identities=22% Similarity=0.264 Sum_probs=201.2
Q ss_pred HHhccccccccccccceeEEEEEEC-CceEEEEEECCCCC--------------ccHHHHHHHHHHhhhccCCcceEEee
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS--------------LDENLFRKEAEFLGKVRHRNLTVLRG 865 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--------------~~~~~~~~E~~~l~~l~H~niv~l~~ 865 (1099)
..++|.+.++||+|+||.||+|... ++..||+|.+.... ...+.+.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 4578999999999999999999986 47899999985432 22467889999999999999999999
Q ss_pred EEecCCCceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCC---c
Q 047739 866 YYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADF---E 942 (1099)
Q Consensus 866 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~---~ 942 (1099)
++.+ ....++||||+++|+|.+++... ..+++..+..++.||+.||+|||+.||+||||||+||+++.++ .
T Consensus 114 ~~~~-~~~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 114 VFED-KKYFYLVTEFYEGGELFEQIINR-----HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EEEC-SSEEEEEEECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSS
T ss_pred EEEc-CCEEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCcc
Confidence 9984 45669999999999999999753 3489999999999999999999999999999999999998775 6
Q ss_pred EEEeccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHH
Q 047739 943 AHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQ 1022 (1099)
Q Consensus 943 ~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~ 1022 (1099)
+||+|||+++.... .......+||+.|+|||++. +.++.++||||+||++|+|++|+.||......+....+...
T Consensus 188 ~kl~Dfg~a~~~~~----~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~ 262 (504)
T 3q5i_A 188 IKIVDFGLSSFFSK----DYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKG 262 (504)
T ss_dssp EEECCCTTCEECCT----TSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred EEEEECCCCEEcCC----CCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence 99999999986522 22344567999999999876 56999999999999999999999999887766655554432
Q ss_pred hhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1023 LQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1023 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
..... .+.+... -..+.+++.+||+.||.+|||++|+++.
T Consensus 263 ----~~~~~-~~~~~~~---------s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 263 ----KYYFD-FNDWKNI---------SDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp ----CCCCC-HHHHTTS---------CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ----CCCCC-ccccCCC---------CHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 11000 0000000 0234689999999999999999999863
No 242
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=5.5e-36 Score=330.34 Aligned_cols=253 Identities=23% Similarity=0.272 Sum_probs=200.1
Q ss_pred HHhccccccccccccceeEEEEEEC-CceEEEEEECCCC--CccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEE
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDG--SLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLV 877 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 877 (1099)
..++|++.+.||+|+||.||+|... +++.||+|.+... ....+.+.+|++++++++||||+++++++.+ +...++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv 83 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-GNIQYLF 83 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEc-CCEEEEE
Confidence 4578999999999999999999986 6889999998532 2334778999999999999999999999985 4556999
Q ss_pred EeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCC
Q 047739 878 YDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPT 957 (1099)
Q Consensus 878 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 957 (1099)
|||+++|+|.+++... ..+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||.+......
T Consensus 84 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 84 LEYCSGGELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp EECCTTEEGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred EEecCCCcHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence 9999999999998642 34899999999999999999999999999999999999999999999999999754221
Q ss_pred CCCCccccccccCccccCccccccCCC-CCcCchhhHHHHHHHHHhCCCCCCCCCchhH-HHHHHHHhhhccccccccCc
Q 047739 958 PAEASTSTTAVGTLGYVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPVMFTQDEDI-VKWVKKQLQKGQITELLEPG 1035 (1099)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~S~G~il~elltg~~P~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~ 1035 (1099)
. .........||..|+|||.+.+..+ +.++||||+|+++|||++|+.||........ ...+.. .... .. .
T Consensus 159 ~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~---~~-~ 230 (276)
T 2yex_A 159 N-RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE---KKTY---LN-P 230 (276)
T ss_dssp T-EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHT---TCTT---ST-T
T ss_pred c-chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhh---cccc---cC-c
Confidence 1 1122345679999999999987765 7789999999999999999999976544321 111111 1000 00 0
Q ss_pred ccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1036 LLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
.... + ..+.+++.+||+.||++|||+.|+++.
T Consensus 231 ~~~~-----~----~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 231 WKKI-----D----SAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp GGGS-----C----HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred hhhc-----C----HHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 0000 0 123578999999999999999999863
No 243
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=9.1e-36 Score=337.79 Aligned_cols=265 Identities=22% Similarity=0.369 Sum_probs=198.5
Q ss_pred HhccccccccccccceeEEEEEECC-ceEEEEEECCCCCcc---HHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLD---ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLV 877 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 877 (1099)
.++|+..+.||+|+||.||+|.... |+.||+|++...... .+.+.+|++++++++||||+++++++.+ ....++|
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv 102 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKK-KKRWYLV 102 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeec-CCEEEEE
Confidence 4689999999999999999999864 899999988544332 3567899999999999999999999985 4556999
Q ss_pred EeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCC
Q 047739 878 YDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPT 957 (1099)
Q Consensus 878 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 957 (1099)
|||+++++|.++.... ..+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++....
T Consensus 103 ~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~- 176 (331)
T 4aaa_A 103 FEFVDHTILDDLELFP-----NGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA- 176 (331)
T ss_dssp EECCSEEHHHHHHHST-----TCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred EecCCcchHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecC-
Confidence 9999998888876532 3489999999999999999999999999999999999999999999999999976422
Q ss_pred CCCCccccccccCccccCccccccC-CCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhc----------
Q 047739 958 PAEASTSTTAVGTLGYVSPEAALTG-ETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKG---------- 1026 (1099)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~---------- 1026 (1099)
.........||..|+|||++.+. .++.++||||+|+++|||++|+.||......+....+.......
T Consensus 177 --~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (331)
T 4aaa_A 177 --PGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNK 254 (331)
T ss_dssp ---------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHH
T ss_pred --CccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhh
Confidence 12233456799999999998875 68999999999999999999999998776655444443321110
Q ss_pred --cccccccCcccCCCCCChhHH-HHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1027 --QITELLEPGLLELDPESSEWE-EFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1027 --~~~~~~d~~~~~~~~~~~~~~-~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
.......+......+....+. .-..+.+++.+||+.||++|||++|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 255 NPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp CGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000000111100000000000 0123568999999999999999999875
No 244
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=5.8e-36 Score=330.16 Aligned_cols=246 Identities=22% Similarity=0.294 Sum_probs=193.1
Q ss_pred hccccccccccccceeEEEEEEC-CceEEEEEECCCCC----ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEE
Q 047739 803 RQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS----LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLV 877 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 877 (1099)
++|.+.+.||+|+||.||+|.+. +|+.||+|.+.... ...+.+.+|++++++++||||+++++++.. +...++|
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv 89 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST-PTDFFMV 89 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec-CCeEEEE
Confidence 57899999999999999999986 68999999985322 224578899999999999999999999985 4567999
Q ss_pred EeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCC
Q 047739 878 YDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPT 957 (1099)
Q Consensus 878 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 957 (1099)
|||+++++|.+++... ..+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||++.....
T Consensus 90 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~- 163 (276)
T 2h6d_A 90 MEYVSGGELFDYICKH-----GRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD- 163 (276)
T ss_dssp EECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred EeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCC-
Confidence 9999999999999753 2388999999999999999999999999999999999999999999999999976522
Q ss_pred CCCCccccccccCccccCccccccCCC-CCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcc
Q 047739 958 PAEASTSTTAVGTLGYVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGL 1036 (1099)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1036 (1099)
........|++.|+|||.+.+..+ +.++||||+|+++|||++|+.||.........+.+... ... ..
T Consensus 164 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~----~~~--~~--- 231 (276)
T 2h6d_A 164 ---GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG----VFY--IP--- 231 (276)
T ss_dssp ----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC----CCC--CC---
T ss_pred ---CcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcC----ccc--Cc---
Confidence 122334578999999999987765 58999999999999999999999776555444433321 100 00
Q ss_pred cCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1037 LELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
...+ ..+.+++.+||+.||++|||+.|+++.
T Consensus 232 -----~~~~----~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 232 -----EYLN----RSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp -----TTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -----hhcC----HHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0001 124578999999999999999999974
No 245
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.2e-35 Score=332.34 Aligned_cols=248 Identities=23% Similarity=0.322 Sum_probs=203.3
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCC--CccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDG--SLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVY 878 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 878 (1099)
.+.|+..+.||+|+||.||+|... +++.||+|.+... ....+.+.+|+.++++++||||+++++++... ...++||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~lv~ 99 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD-TKLWIIM 99 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEET-TEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEEEEE
Confidence 457999999999999999999875 5889999998543 23457899999999999999999999999854 4569999
Q ss_pred eecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCC
Q 047739 879 DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTP 958 (1099)
Q Consensus 879 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 958 (1099)
||+++++|.+++.. ..+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++......
T Consensus 100 e~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~- 172 (303)
T 3a7i_A 100 EYLGGGSALDLLEP------GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT- 172 (303)
T ss_dssp ECCTTEEHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTT-
T ss_pred EeCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCcc-
Confidence 99999999999864 34899999999999999999999999999999999999999999999999999765221
Q ss_pred CCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcccC
Q 047739 959 AEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLE 1038 (1099)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 1038 (1099)
........||..|+|||++.+..++.++||||||+++|||++|+.||...........+.. .... .....
T Consensus 173 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~~~~-~~~~~--- 242 (303)
T 3a7i_A 173 --QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK----NNPP-TLEGN--- 242 (303)
T ss_dssp --BCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH----SCCC-CCCSS---
T ss_pred --ccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhc----CCCC-CCccc---
Confidence 2233456799999999999999999999999999999999999999976655444333222 1111 01111
Q ss_pred CCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1039 LDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
.+ ..+.+++.+||+.||++|||+.|+++.
T Consensus 243 -----~~----~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 243 -----YS----KPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp -----CC----HHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred -----cC----HHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 11 124578999999999999999999874
No 246
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=9.4e-36 Score=365.93 Aligned_cols=256 Identities=22% Similarity=0.352 Sum_probs=204.6
Q ss_pred HHhccccccccccccceeEEEEEECC----ceEEEEEECCCCCcc--HHHHHHHHHHhhhccCCcceEEeeEEecCCCce
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYND----GMVLSIRRLPDGSLD--ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLR 874 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 874 (1099)
..++|+..+.||+|+||.||+|.+.. +..||+|.+...... .+.+.+|+.++++++||||+++++++.+ +..
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~--~~~ 465 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE--NPV 465 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSC
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec--Cce
Confidence 35678999999999999999998742 578999998654322 3678999999999999999999999863 346
Q ss_pred EEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccccc
Q 047739 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLT 954 (1099)
Q Consensus 875 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~ 954 (1099)
++||||+++|+|.++++.. ...+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++..
T Consensus 466 ~lv~E~~~~g~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~ 541 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQVR----KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541 (656)
T ss_dssp EEEEECCTTCBHHHHHHHT----TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred EEEEEcCCCCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeec
Confidence 9999999999999999753 234899999999999999999999999999999999999999999999999999865
Q ss_pred CCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhcccccccc
Q 047739 955 IPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITELLE 1033 (1099)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 1033 (1099)
... .........+|+.|+|||++.+..++.++||||||+++|||++ |..||......+....+..... .. ..
T Consensus 542 ~~~--~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~----~~-~~ 614 (656)
T 2j0j_A 542 EDS--TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER----LP-MP 614 (656)
T ss_dssp CC------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCC----CC-CC
T ss_pred CCC--cceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC----CC-CC
Confidence 221 2222334567889999999998999999999999999999997 9999987766665554433211 00 00
Q ss_pred CcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhccc
Q 047739 1034 PGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCR 1081 (1099)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~ 1081 (1099)
+ ..+ ..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 615 ~--------~~~----~~l~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 615 P--------NCP----PTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp T--------TCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred c--------ccc----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 0 111 13457899999999999999999999998764
No 247
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.8e-35 Score=333.84 Aligned_cols=269 Identities=21% Similarity=0.312 Sum_probs=196.7
Q ss_pred HhccccccccccccceeEEEEEECC-ceEEEEEECCCCCc-cHHHHHHHHHHhhhccCCcceEEeeEEec----------
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSL-DENLFRKEAEFLGKVRHRNLTVLRGYYAG---------- 869 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~---------- 869 (1099)
.++|...+.||+|+||.||+|.... |+.||+|++..... ..+.+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 4579999999999999999999875 89999998865432 34678999999999999999999998742
Q ss_pred ---CCCceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEEC-CCCcEEE
Q 047739 870 ---APDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFD-ADFEAHL 945 (1099)
Q Consensus 870 ---~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~-~~~~~kl 945 (1099)
.....++||||++ |+|.+++.. ..+++..+..++.|+++||+|||+.||+||||||+||+++ +++.+||
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl 162 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKI 162 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEE
T ss_pred cccccCceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEE
Confidence 2345689999997 699999863 3488999999999999999999999999999999999997 5679999
Q ss_pred eccccccccCCCCCCCccccccccCccccCcccccc-CCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhh
Q 047739 946 SDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALT-GETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQ 1024 (1099)
Q Consensus 946 ~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~ 1024 (1099)
+|||+++................+|..|+|||.+.+ ..++.++||||||+++|||++|+.||......+....+.....
T Consensus 163 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 242 (320)
T 2i6l_A 163 GDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIP 242 (320)
T ss_dssp CCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSC
T ss_pred ccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence 999999865332222233445678999999998865 6789999999999999999999999987766555444433211
Q ss_pred hcc----------ccccccCcccCCCCCChhHHH-----HHHHHHHHHhcCCCCCCCCCCHHHHHH--Hhhcc
Q 047739 1025 KGQ----------ITELLEPGLLELDPESSEWEE-----FLLGVKVALLCTAPDPIDRPTMSDIVF--MLEGC 1080 (1099)
Q Consensus 1025 ~~~----------~~~~~d~~~~~~~~~~~~~~~-----~~~~~~li~~Cl~~dP~~RPs~~evl~--~L~~~ 1080 (1099)
... +.......... ....... -..+.+++.+||+.||++|||++|+++ .+...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 312 (320)
T 2i6l_A 243 VVHEEDRQELLSVIPVYIRNDMTE---PHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIY 312 (320)
T ss_dssp CCCHHHHHHHHTTSCHHHHHHTTS---CCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTT
T ss_pred CCchhhhhhhhhcCcccccccccC---CCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccc
Confidence 000 00000000000 0000000 123468999999999999999999987 45443
No 248
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.3e-36 Score=342.47 Aligned_cols=262 Identities=18% Similarity=0.234 Sum_probs=187.0
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCC-ccHHHHHHHHHHhhhcc-CCcceEEeeEEe-------cCC
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS-LDENLFRKEAEFLGKVR-HRNLTVLRGYYA-------GAP 871 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~~~~~-------~~~ 871 (1099)
..+|++.++||+|+||.||+|.+. +++.||+|++.... ...+.+.+|+.+++++. ||||+++++++. ...
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 357999999999999999999975 58899999885433 33467889999999996 999999999984 233
Q ss_pred CceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCC--ceecCCCCCCEEECCCCcEEEeccc
Q 047739 872 DLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSN--MVHGDIKPQNVLFDADFEAHLSDFG 949 (1099)
Q Consensus 872 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~--iiH~Dlk~~NIll~~~~~~kl~DfG 949 (1099)
...++||||+. |+|.+++.... ....+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg 183 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKME--SRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFG 183 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHH--TTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred ceEEEEEEecC-CCHHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCc
Confidence 44689999996 79999997532 2345899999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCC---------ccccccccCccccCcccc---ccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHH
Q 047739 950 LDRLTIPTPAEA---------STSTTAVGTLGYVSPEAA---LTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVK 1017 (1099)
Q Consensus 950 la~~~~~~~~~~---------~~~~~~~gt~~y~aPE~~---~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~ 1017 (1099)
+++......... .......||+.|+|||++ .+..++.++||||||+++|||++|+.||..........
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~ 263 (337)
T 3ll6_A 184 SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVN 263 (337)
T ss_dssp TCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred cceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhc
Confidence 998653222111 112245699999999998 56678899999999999999999999996543321111
Q ss_pred HHHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCCCC
Q 047739 1018 WVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPDI 1086 (1099)
Q Consensus 1018 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~ 1086 (1099)
. ........ ... ..+.+++.+||+.||++||++.|+++.|+.+......
T Consensus 264 ---~-----~~~~~~~~------~~~------~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~ 312 (337)
T 3ll6_A 264 ---G-----KYSIPPHD------TQY------TVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNV 312 (337)
T ss_dssp ----------CCCCTTC------CSS------GGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTC
T ss_pred ---C-----cccCCccc------ccc------hHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCC
Confidence 0 00000000 000 1135789999999999999999999999988755443
No 249
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=3.1e-36 Score=337.20 Aligned_cols=267 Identities=21% Similarity=0.291 Sum_probs=185.6
Q ss_pred HHhccccccccccccceeEEEEEEC-CceEEEEEECCCCC--ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEE
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS--LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLV 877 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 877 (1099)
..++|++.+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|++++++++||||+++++++.... ..++|
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv 91 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD-ELWLV 91 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSS-CEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecC-CcEEE
Confidence 3568999999999999999999864 68899999986432 23467889999999999999999999998554 56999
Q ss_pred EeecCCCCHHHHHhhhcc---CCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccccc
Q 047739 878 YDYMPNGNLGTLLQEASH---QDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLT 954 (1099)
Q Consensus 878 ~e~~~~gsL~~~l~~~~~---~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~ 954 (1099)
|||+++|+|.+++..... .....+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++..
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 171 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL 171 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHC
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchhee
Confidence 999999999999975321 12345899999999999999999999999999999999999999999999999998754
Q ss_pred CCCCC--CCccccccccCccccCcccccc-CCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhcccccc
Q 047739 955 IPTPA--EASTSTTAVGTLGYVSPEAALT-GETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITEL 1031 (1099)
Q Consensus 955 ~~~~~--~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1099)
..... .........||+.|+|||.+.+ ..++.++||||+|+++|||++|+.||........................
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 251 (303)
T 2vwi_A 172 ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGV 251 (303)
T ss_dssp C---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC--
T ss_pred ccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcccccc
Confidence 32211 1122344679999999999875 56899999999999999999999999876554433222111000000000
Q ss_pred ccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1032 LEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1032 ~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
.++... .. .. ..+.+++.+||+.||.+||++.|+++.
T Consensus 252 ~~~~~~---~~-~~----~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 252 QDKEML---KK-YG----KSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp ---CCC---CC-CC----HHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ccchhh---hh-hh----HHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 000000 00 00 124578999999999999999999873
No 250
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.4e-35 Score=335.57 Aligned_cols=256 Identities=20% Similarity=0.243 Sum_probs=201.2
Q ss_pred HHHHhccccc-cccccccceeEEEEEEC-CceEEEEEECCCC---CccHHHHHHHHHHhhhcc-CCcceEEeeEEecCCC
Q 047739 799 VEATRQFDEE-NVLSRTRYGLVFKACYN-DGMVLSIRRLPDG---SLDENLFRKEAEFLGKVR-HRNLTVLRGYYAGAPD 872 (1099)
Q Consensus 799 ~~~~~~~~~~-~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~ 872 (1099)
....++|.+. +.||+|+||.||+|... +|+.||+|.+... ......+.+|+.++++++ ||||+++++++.. ..
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~-~~ 102 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN-TS 102 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SS
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe-CC
Confidence 4455677776 89999999999999986 5899999998542 223577899999999995 6999999999984 45
Q ss_pred ceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECC---CCcEEEeccc
Q 047739 873 LRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDA---DFEAHLSDFG 949 (1099)
Q Consensus 873 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~---~~~~kl~DfG 949 (1099)
..++||||+++|+|.+++... ....+++..+..++.|++.||+|||+.||+||||||+||+++. ++.+||+|||
T Consensus 103 ~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg 179 (327)
T 3lm5_A 103 EIILILEYAAGGEIFSLCLPE---LAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFG 179 (327)
T ss_dssp EEEEEEECCTTEEGGGGGSSC---C-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGG
T ss_pred eEEEEEEecCCCcHHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCc
Confidence 569999999999999998632 2355899999999999999999999999999999999999987 7899999999
Q ss_pred cccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhcccc
Q 047739 950 LDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQIT 1029 (1099)
Q Consensus 950 la~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 1029 (1099)
+++.... ........||+.|+|||++.+..++.++||||+|+++|||++|+.||......+....+..... ..
T Consensus 180 ~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~--~~- 252 (327)
T 3lm5_A 180 MSRKIGH----ACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNV--DY- 252 (327)
T ss_dssp GCEEC-------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CC-
T ss_pred cccccCC----ccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhccc--cc-
Confidence 9986522 2223446799999999999999999999999999999999999999987666554444333211 00
Q ss_pred ccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1030 ELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1030 ~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
..+.+. ... ..+.+++.+||+.||++|||++|+++.
T Consensus 253 --~~~~~~-----~~~----~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 253 --SEETFS-----SVS----QLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp --CTTTTT-----TSC----HHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred --Cchhhc-----ccC----HHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 000000 000 124578999999999999999999874
No 251
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.2e-35 Score=335.52 Aligned_cols=250 Identities=21% Similarity=0.296 Sum_probs=194.5
Q ss_pred HHhccccccccccccceeEEEEEEC-CceEEEEEECCCCCc---------cHHHHHHHHHHhhhccCCcceEEeeEEecC
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL---------DENLFRKEAEFLGKVRHRNLTVLRGYYAGA 870 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 870 (1099)
..++|.+.+.||+|+||.||+|.+. +++.||+|.+..... ....+.+|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 4578999999999999999999986 479999999864321 124588999999999999999999998743
Q ss_pred CCceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCc---EEEec
Q 047739 871 PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFE---AHLSD 947 (1099)
Q Consensus 871 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~---~kl~D 947 (1099)
. .++||||+++|+|.+++... ..+++.....++.||++||+|||+.||+||||||+||+++.++. +||+|
T Consensus 88 -~-~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 88 -D-YYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp -S-EEEEEECCTTEETHHHHSTT-----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred -c-eEEEEecCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 3 69999999999999998642 35899999999999999999999999999999999999987654 99999
Q ss_pred cccccccCCCCCCCccccccccCccccCccccc---cCCCCCcCchhhHHHHHHHHHhCCCCCCCCCch-hHHHHHHHHh
Q 047739 948 FGLDRLTIPTPAEASTSTTAVGTLGYVSPEAAL---TGETTKESDVYSFGIVLLELLTGKRPVMFTQDE-DIVKWVKKQL 1023 (1099)
Q Consensus 948 fGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~-~~~~~~~~~~ 1023 (1099)
||+++... .........||..|+|||++. ...++.++||||+|+++|||++|+.||...... .....+....
T Consensus 161 fg~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 236 (322)
T 2ycf_A 161 FGHSKILG----ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGK 236 (322)
T ss_dssp CTTCEECC----CCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTC
T ss_pred Cccceecc----cccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCc
Confidence 99998652 122234467999999999874 466889999999999999999999999754433 2222222210
Q ss_pred hhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1024 QKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1024 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
. ....+ ..... -..+.+++.+||+.||++||++.|+++
T Consensus 237 ~-~~~~~-~~~~~------------~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 237 Y-NFIPE-VWAEV------------SEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp C-CCCHH-HHTTS------------CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred c-ccCch-hhhhc------------CHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 0 00000 00000 123468999999999999999999884
No 252
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=3.1e-35 Score=337.86 Aligned_cols=279 Identities=18% Similarity=0.248 Sum_probs=199.9
Q ss_pred HHHHHHHhccccccccccccceeEEEEEEC-CceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecCCC--
Q 047739 796 AETVEATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPD-- 872 (1099)
Q Consensus 796 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-- 872 (1099)
.+.....++|.+.+.||+|+||.||+|.+. +|..||+|++.........+.+|++.+++++||||+++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 345667889999999999999999999985 58999999986655555667888999999999999999999864222
Q ss_pred ----ceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHc--cCCceecCCCCCCEEECC-CCcEEE
Q 047739 873 ----LRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLH--TSNMVHGDIKPQNVLFDA-DFEAHL 945 (1099)
Q Consensus 873 ----~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--~~~iiH~Dlk~~NIll~~-~~~~kl 945 (1099)
..++||||+++ +|.+.+.... .....+++..+..++.|++.|+.||| +.||+||||||+||+++. ++.+||
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl 173 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYY-RRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKL 173 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEE
T ss_pred ccceeEEEEeecccc-cHHHHHHHHh-hcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEE
Confidence 25799999975 6665554322 23455889999999999999999999 999999999999999996 899999
Q ss_pred eccccccccCCCCCCCccccccccCccccCccccccCC-CCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhh
Q 047739 946 SDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGE-TTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQ 1024 (1099)
Q Consensus 946 ~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~ 1024 (1099)
+|||+++.... ........||..|+|||++.+.. ++.++|||||||++|||++|+.||...........+.+...
T Consensus 174 ~Dfg~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 249 (360)
T 3e3p_A 174 CDFGSAKKLSP----SEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLG 249 (360)
T ss_dssp CCCTTCBCCCT----TSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC
T ss_pred eeCCCceecCC----CCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcC
Confidence 99999986532 22234567899999999987654 89999999999999999999999988776666555544322
Q ss_pred hccc--cccccCccc---CCCCCChhHHH---------HHHHHHHHHhcCCCCCCCCCCHHHHHHH--hhcc
Q 047739 1025 KGQI--TELLEPGLL---ELDPESSEWEE---------FLLGVKVALLCTAPDPIDRPTMSDIVFM--LEGC 1080 (1099)
Q Consensus 1025 ~~~~--~~~~d~~~~---~~~~~~~~~~~---------~~~~~~li~~Cl~~dP~~RPs~~evl~~--L~~~ 1080 (1099)
.... ....++... ........+.. -..+.+++.+||+.||++|||+.|+++. +.+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 321 (360)
T 3e3p_A 250 CPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDEL 321 (360)
T ss_dssp CCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGG
T ss_pred CCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCcccccc
Confidence 1110 000000000 00001111111 1345689999999999999999999974 4444
No 253
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=8.6e-36 Score=367.45 Aligned_cols=248 Identities=22% Similarity=0.320 Sum_probs=203.3
Q ss_pred HHhccccccccccccceeEEEEEEC-CceEEEEEECCCC----CccHHHHHHHHHHhhhc-cCCcceEEeeEEecCCCce
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDG----SLDENLFRKEAEFLGKV-RHRNLTVLRGYYAGAPDLR 874 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 874 (1099)
..++|++.++||+|+||.||+|.++ +++.||+|++... ....+.+..|.+++..+ +||+|+++++++.+ .+..
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~-~~~~ 417 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT-MDRL 417 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBC-SSEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEe-CCEE
Confidence 3568999999999999999999986 4789999998532 22345678899999987 79999999999874 4567
Q ss_pred EEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccccc
Q 047739 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLT 954 (1099)
Q Consensus 875 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~ 954 (1099)
|+||||+++|+|.++++.. ..+++..+..++.||+.||+|||+.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 418 ~lV~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp EEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred EEEEeCcCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 9999999999999999864 24899999999999999999999999999999999999999999999999999854
Q ss_pred CCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccC
Q 047739 955 IPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEP 1034 (1099)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1034 (1099)
.. ........+||+.|+|||++.+..++.++|||||||++|||++|+.||...+..++.+.+... ... +..
T Consensus 493 ~~---~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~----~~~--~p~ 563 (674)
T 3pfq_A 493 IW---DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH----NVA--YPK 563 (674)
T ss_dssp CC---TTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSS----CCC--CCT
T ss_pred cc---CCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhC----CCC--CCc
Confidence 21 223345678999999999999999999999999999999999999999887766655554331 110 001
Q ss_pred cccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCH-----HHHHH
Q 047739 1035 GLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTM-----SDIVF 1075 (1099)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~-----~evl~ 1075 (1099)
.+ . ..+.+++.+||+.||++||++ +||.+
T Consensus 564 ~~--------s----~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 564 SM--------S----KEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp TS--------C----HHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred cC--------C----HHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 00 1 134689999999999999997 77764
No 254
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.1e-35 Score=330.94 Aligned_cols=251 Identities=22% Similarity=0.340 Sum_probs=197.1
Q ss_pred HHhccccccccccccceeEEEEEEC-CceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEe
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYD 879 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e 879 (1099)
..++|+..+.||+|+||.||+|.+. +|+.||+|.+.... ..+.+.+|++++++++||||+++++++.. ....++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFK-NTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEe-CCEEEEEee
Confidence 4568999999999999999999986 48999999986533 34678999999999999999999999985 445699999
Q ss_pred ecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCCC
Q 047739 880 YMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTPA 959 (1099)
Q Consensus 880 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 959 (1099)
|+++|+|.+++... ...+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++.....
T Consensus 105 ~~~~~~L~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~--- 177 (314)
T 3com_A 105 YCGAGSVSDIIRLR----NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD--- 177 (314)
T ss_dssp CCTTEEHHHHHHHH----TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBT---
T ss_pred cCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhh---
Confidence 99999999999742 23589999999999999999999999999999999999999999999999999976422
Q ss_pred CCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcccCC
Q 047739 960 EASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLEL 1039 (1099)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 1039 (1099)
.........||..|+|||.+.+..++.++||||+|+++|||++|+.||...........+.. ........+
T Consensus 178 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~----- 248 (314)
T 3com_A 178 TMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPT----NPPPTFRKP----- 248 (314)
T ss_dssp TBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH----SCCCCCSSG-----
T ss_pred hccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhc----CCCcccCCc-----
Confidence 12233456799999999999998999999999999999999999999976554333222211 110000000
Q ss_pred CCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1040 DPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1040 ~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
..+. ..+.+++.+||+.||++|||+.|+++
T Consensus 249 ----~~~~--~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 249 ----ELWS--DNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp ----GGSC--HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ----ccCC--HHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0000 13457899999999999999999986
No 255
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=6.7e-36 Score=332.25 Aligned_cols=252 Identities=19% Similarity=0.287 Sum_probs=184.1
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCccH---HHHHHHHHHhhhccCCcceEEeeEEecCCCceEEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDE---NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLV 877 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~---~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 877 (1099)
.++|+..+.||+|+||.||+|... +|+.||+|++....... +.+.++...++.++||||+++++++.+. ...++|
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~-~~~~lv 84 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFRE-GDVWIC 84 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECS-SSEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeecc-CCEEEE
Confidence 468999999999999999999984 68999999986543222 3344555568888999999999999854 456999
Q ss_pred EeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccC-CceecCCCCCCEEECCCCcEEEeccccccccCC
Q 047739 878 YDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTS-NMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIP 956 (1099)
Q Consensus 878 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 956 (1099)
|||++ |+|.+++..... ....+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++....
T Consensus 85 ~e~~~-~~l~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 85 MELMD-TSLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp EECCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred Eehhc-cchHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 99997 599888875322 335689999999999999999999998 999999999999999999999999999976522
Q ss_pred CCCCCccccccccCccccCcccc----ccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccc
Q 047739 957 TPAEASTSTTAVGTLGYVSPEAA----LTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELL 1032 (1099)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1099)
........||+.|+|||++ .+..++.++||||+|+++|||++|+.||....... ..+........ ....
T Consensus 163 ----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~-~~~~ 235 (290)
T 3fme_A 163 ----DVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF--QQLKQVVEEPS-PQLP 235 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH--HHHHHHHHSCC-CCCC
T ss_pred ----cccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchH--HHHHHHhccCC-CCcc
Confidence 2223345799999999996 45678999999999999999999999997533321 11112211111 1111
Q ss_pred cCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1033 EPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1033 d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
.. ... ..+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~--------~~~----~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 236 AD--------KFS----AEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp TT--------TSC----HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cc--------cCC----HHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 10 001 12467899999999999999999987
No 256
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=5.9e-35 Score=334.51 Aligned_cols=270 Identities=21% Similarity=0.280 Sum_probs=202.7
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCc--cHHHHHHHHHHhhhccCCcceEEeeEEecC----CCce
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL--DENLFRKEAEFLGKVRHRNLTVLRGYYAGA----PDLR 874 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~----~~~~ 874 (1099)
.++|...+.||+|+||.||+|.+. +|+.||+|.+..... ....+.+|++++++++||||+++++++... ....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 467999999999999999999986 589999999864332 235688999999999999999999988643 2556
Q ss_pred EEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccccc
Q 047739 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLT 954 (1099)
Q Consensus 875 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~ 954 (1099)
++||||++ |+|.+++.. ..+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++..
T Consensus 90 ~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIST------QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII 162 (353)
T ss_dssp EEEECCCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEeccC-ccHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence 99999997 699999875 24899999999999999999999999999999999999999999999999999865
Q ss_pred CCCCCCC-------ccccccccCccccCcccccc-CCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhc
Q 047739 955 IPTPAEA-------STSTTAVGTLGYVSPEAALT-GETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKG 1026 (1099)
Q Consensus 955 ~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~ 1026 (1099)
....... ......+||..|+|||++.+ ..++.++||||+||++|||++|+.||......+....+.......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (353)
T 2b9h_A 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTP 242 (353)
T ss_dssp C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC
Confidence 3221111 11234578999999998765 678999999999999999999999998776655444443332211
Q ss_pred ccccccc-----------CcccCCCCCChhHHH-----HHHHHHHHHhcCCCCCCCCCCHHHHHH--Hhhcc
Q 047739 1027 QITELLE-----------PGLLELDPESSEWEE-----FLLGVKVALLCTAPDPIDRPTMSDIVF--MLEGC 1080 (1099)
Q Consensus 1027 ~~~~~~d-----------~~~~~~~~~~~~~~~-----~~~~~~li~~Cl~~dP~~RPs~~evl~--~L~~~ 1080 (1099)
....... ....... ....+. -..+.+++.+||+.||++|||++|+++ .++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 312 (353)
T 2b9h_A 243 HSDNDLRCIESPRAREYIKSLPMYP--AAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTY 312 (353)
T ss_dssp CSTTTTTTCCCHHHHHHHHTSCCCC--CCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred chhccccccccchhhHHhhcccCCC--CcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence 1000000 0000000 000000 123468999999999999999999997 44443
No 257
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.9e-35 Score=328.51 Aligned_cols=250 Identities=23% Similarity=0.318 Sum_probs=200.9
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCC----------ccHHHHHHHHHHhhhcc-CCcceEEeeEEec
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS----------LDENLFRKEAEFLGKVR-HRNLTVLRGYYAG 869 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----------~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~ 869 (1099)
.++|+..+.||+|+||.||+|... +|+.||+|.+.... ...+.+.+|+++++++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 468999999999999999999986 58999999985432 11356789999999996 9999999999974
Q ss_pred CCCceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccc
Q 047739 870 APDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFG 949 (1099)
Q Consensus 870 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfG 949 (1099)
....++||||+++|+|.+++... ..+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||
T Consensus 96 -~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 96 -NTFFFLVFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp -SSEEEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred -CCeEEEEEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEeccc
Confidence 45679999999999999999753 348999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCccccccccCccccCccccc------cCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHh
Q 047739 950 LDRLTIPTPAEASTSTTAVGTLGYVSPEAAL------TGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQL 1023 (1099)
Q Consensus 950 la~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~ 1023 (1099)
++..... ........|+..|+|||++. ...++.++||||+|+++|||++|+.||...........+...
T Consensus 170 ~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~- 244 (298)
T 1phk_A 170 FSCQLDP----GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG- 244 (298)
T ss_dssp TCEECCT----TCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-
T ss_pred chhhcCC----CcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcC-
Confidence 9976532 12334567999999999885 456889999999999999999999999876655444433322
Q ss_pred hhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1024 QKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1024 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
... ...+..... -..+.+++.+||+.||++|||+.|+++
T Consensus 245 ---~~~-~~~~~~~~~---------~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 245 ---NYQ-FGSPEWDDY---------SDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp ---CCC-CCTTTGGGS---------CHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ---Ccc-cCccccccc---------CHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 110 000100000 013458999999999999999999986
No 258
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.2e-36 Score=350.80 Aligned_cols=254 Identities=13% Similarity=0.037 Sum_probs=178.7
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCc----cHHHHHHHHHHhhhc--cCCcceEEe-------eEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL----DENLFRKEAEFLGKV--RHRNLTVLR-------GYY 867 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l--~H~niv~l~-------~~~ 867 (1099)
..+|...+.||+|+||.||+|.+. +|+.||+|++..... ..+.+.+|+++++.+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 346889999999999999999976 689999999976443 235677886555555 599988855 333
Q ss_pred ecCC----------------CceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHH------HHHHHHHHHHHHHHccCCc
Q 047739 868 AGAP----------------DLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMR------HLIALGVARGLAFLHTSNM 925 (1099)
Q Consensus 868 ~~~~----------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~------~~i~~~ia~~L~~LH~~~i 925 (1099)
...+ ...|+||||++ |+|.+++..... .+.+..+ ..++.||++||+|||+.||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~i 215 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF----VYVFRGDEGILALHILTAQLIRLAANLQSKGL 215 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc----ccchhhhhhhhhHHHHHHHHHHHHHHHHHCCC
Confidence 3211 23689999998 899999986432 2455566 7888999999999999999
Q ss_pred eecCCCCCCEEECCCCcEEEeccccccccCCCCCCCccccccccCccccCcccccc--CCCCCcCchhhHHHHHHHHHhC
Q 047739 926 VHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALT--GETTKESDVYSFGIVLLELLTG 1003 (1099)
Q Consensus 926 iH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DV~S~G~il~elltg 1003 (1099)
+||||||+||+++.++.+||+|||+|+... .......+|+.|+|||++.+ ..++.++|||||||++|||++|
T Consensus 216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg 289 (371)
T 3q60_A 216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVG------TRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCL 289 (371)
T ss_dssp EETTCSGGGEEECTTSCEEECCGGGEEETT------CEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHS
T ss_pred ccCcCCHHHEEECCCCCEEEEecceeeecC------CCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhC
Confidence 999999999999999999999999998541 12224567799999999987 6799999999999999999999
Q ss_pred CCCCCCCCchhHHHHHHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1004 KRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1004 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
+.||.......... ......................+ ..+.+++.+||+.||++|||+.|+++
T Consensus 290 ~~Pf~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~----~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 290 FLPFGLVTPGIKGS-----WKRPSLRVPGTDSLAFGSCTPLP----DFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp SCSTTBCCTTCTTC-----CCBCCTTSCCCCSCCCTTSSCCC----HHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCCCcCcccccc-----hhhhhhhhccccccchhhccCCC----HHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 99997653321100 00000000000000000000111 13457899999999999999999974
No 259
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.5e-35 Score=328.52 Aligned_cols=252 Identities=24% Similarity=0.398 Sum_probs=193.2
Q ss_pred ccccccccccccceeEEEEEEC-CceEEEEEECCCCC-ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEEeec
Q 047739 804 QFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS-LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVYDYM 881 (1099)
Q Consensus 804 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~e~~ 881 (1099)
+|....+||+|+||.||+|.+. ++..||+|.+.... ...+.+.+|++++++++||||+++++++... ...++||||+
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~lv~e~~ 101 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSEN-GFIKIFMEQV 101 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEET-TEEEEEEECC
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeC-CcEEEEEEeC
Confidence 3555669999999999999975 57899999986543 3357799999999999999999999999854 4569999999
Q ss_pred CCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECC-CCcEEEeccccccccCCCCCC
Q 047739 882 PNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDA-DFEAHLSDFGLDRLTIPTPAE 960 (1099)
Q Consensus 882 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~-~~~~kl~DfGla~~~~~~~~~ 960 (1099)
++++|.+++... .....+++..+..++.|+++||+|||+.||+||||||+||+++. ++.+||+|||+++.....
T Consensus 102 ~~~~L~~~l~~~--~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~--- 176 (295)
T 2clq_A 102 PGGSLSALLRSK--WGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI--- 176 (295)
T ss_dssp SEEEHHHHHHHT--TCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCCHHHHHHhh--ccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCC---
Confidence 999999999753 22334678889999999999999999999999999999999987 899999999999765221
Q ss_pred CccccccccCccccCccccccCC--CCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcccC
Q 047739 961 ASTSTTAVGTLGYVSPEAALTGE--TTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLE 1038 (1099)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 1038 (1099)
........||..|+|||++.+.. ++.++||||||+++|||++|+.||........... ..... .. .+.+
T Consensus 177 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~-~~-----~~~~-- 247 (295)
T 2clq_A 177 NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF-KVGMF-KV-----HPEI-- 247 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHH-HHHHH-CC-----CCCC--
T ss_pred CCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHH-hhccc-cc-----cccc--
Confidence 12234567999999999987643 78999999999999999999999975443322111 11111 00 0000
Q ss_pred CCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1039 LDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
. .... ..+.+++.+||+.||++||++.|+++.
T Consensus 248 -~-~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 248 -P-ESMS----AEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp -C-TTSC----HHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred -c-ccCC----HHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 0011 124578999999999999999999863
No 260
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=5.5e-35 Score=338.08 Aligned_cols=263 Identities=19% Similarity=0.217 Sum_probs=204.6
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCccHHHHHHHHHHhhhcc-CC-----cceEEeeEEecCCCce
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFRKEAEFLGKVR-HR-----NLTVLRGYYAGAPDLR 874 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~-H~-----niv~l~~~~~~~~~~~ 874 (1099)
.++|++.+.||+|+||.||+|... +++.||+|++.......+.+.+|+++++.++ |+ +|+++++++... ...
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~-~~~ 131 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR-NHL 131 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET-TEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC-Cce
Confidence 468999999999999999999876 5889999999765555577888999999885 55 499999998854 556
Q ss_pred EEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHcc--CCceecCCCCCCEEEC--CCCcEEEecccc
Q 047739 875 LLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHT--SNMVHGDIKPQNVLFD--ADFEAHLSDFGL 950 (1099)
Q Consensus 875 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~--~~iiH~Dlk~~NIll~--~~~~~kl~DfGl 950 (1099)
++||||++ |+|.+++.... ...+++..+..++.|++.||+|||+ .||+||||||+||+++ .++.+||+|||+
T Consensus 132 ~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~ 207 (382)
T 2vx3_A 132 CLVFEMLS-YNLYDLLRNTN---FRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGS 207 (382)
T ss_dssp EEEEECCC-CBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred EEEEecCC-CCHHHHHhhcC---cCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence 99999996 59999998532 2348999999999999999999994 6999999999999994 578899999999
Q ss_pred ccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccc--
Q 047739 951 DRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQI-- 1028 (1099)
Q Consensus 951 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~-- 1028 (1099)
|+.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+.........
T Consensus 208 a~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~ 281 (382)
T 2vx3_A 208 SCQLGQ------RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHI 281 (382)
T ss_dssp CEETTC------CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHH
T ss_pred ceeccc------ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 986521 233468999999999999999999999999999999999999999887776666655543221100
Q ss_pred -----------cccccCccc----------CCCCC-----------------------ChhHHHHHHHHHHHHhcCCCCC
Q 047739 1029 -----------TELLEPGLL----------ELDPE-----------------------SSEWEEFLLGVKVALLCTAPDP 1064 (1099)
Q Consensus 1029 -----------~~~~d~~~~----------~~~~~-----------------------~~~~~~~~~~~~li~~Cl~~dP 1064 (1099)
....+..+. ...+. .....+...+.+++.+||+.||
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP 361 (382)
T 2vx3_A 282 LDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDP 361 (382)
T ss_dssp HTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCT
T ss_pred HHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCCh
Confidence 000000000 00000 0111233456789999999999
Q ss_pred CCCCCHHHHHH
Q 047739 1065 IDRPTMSDIVF 1075 (1099)
Q Consensus 1065 ~~RPs~~evl~ 1075 (1099)
++|||++|+++
T Consensus 362 ~~Rpta~e~L~ 372 (382)
T 2vx3_A 362 KTRIQPYYALQ 372 (382)
T ss_dssp TTSCCHHHHTT
T ss_pred hhCCCHHHHhc
Confidence 99999999986
No 261
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=4.8e-35 Score=333.11 Aligned_cols=264 Identities=17% Similarity=0.247 Sum_probs=203.6
Q ss_pred HhccccccccccccceeEEEEEE-C-CceEEEEEECCCCCccHHHHHHHHHHhhhccCCc------ceEEeeEEecCCCc
Q 047739 802 TRQFDEENVLSRTRYGLVFKACY-N-DGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRN------LTVLRGYYAGAPDL 873 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~-~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~~~~~ 873 (1099)
.++|++.+.||+|+||.||+|.. . +++.||+|.+.......+.+.+|++++++++|++ ++++++++... ..
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~-~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH-GH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET-TE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC-Cc
Confidence 35799999999999999999987 3 5899999999765555678899999999997654 99999999854 45
Q ss_pred eEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECC--------------
Q 047739 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDA-------------- 939 (1099)
Q Consensus 874 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~-------------- 939 (1099)
.++||||+ +++|.+++.... ...+++..+..++.|+++||+|||+.||+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENG---FLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcC---CCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccc
Confidence 69999999 889999997532 235889999999999999999999999999999999999987
Q ss_pred -----CCcEEEeccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchh
Q 047739 940 -----DFEAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDED 1014 (1099)
Q Consensus 940 -----~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~ 1014 (1099)
++.+||+|||+++.... ......||..|+|||++.+..++.++||||+|+++|||++|+.||...+..+
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 241 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDE------HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE 241 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTS------CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH
T ss_pred cccccCCCceEeeCcccccCcc------ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence 66899999999976421 2234679999999999999999999999999999999999999998776655
Q ss_pred HHHHHHHHhhhccc--------cccccCcccCCCCC------------------ChhHHHHHHHHHHHHhcCCCCCCCCC
Q 047739 1015 IVKWVKKQLQKGQI--------TELLEPGLLELDPE------------------SSEWEEFLLGVKVALLCTAPDPIDRP 1068 (1099)
Q Consensus 1015 ~~~~~~~~~~~~~~--------~~~~d~~~~~~~~~------------------~~~~~~~~~~~~li~~Cl~~dP~~RP 1068 (1099)
....+......... .......-...... ......-..+.+++.+||+.||++||
T Consensus 242 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 321 (339)
T 1z57_A 242 HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRI 321 (339)
T ss_dssp HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccccc
Confidence 54444332211000 00000000000000 00001123456899999999999999
Q ss_pred CHHHHHHH
Q 047739 1069 TMSDIVFM 1076 (1099)
Q Consensus 1069 s~~evl~~ 1076 (1099)
|+.|+++.
T Consensus 322 t~~ell~h 329 (339)
T 1z57_A 322 TLREALKH 329 (339)
T ss_dssp CHHHHTTS
T ss_pred CHHHHhcC
Confidence 99999853
No 262
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.9e-35 Score=330.71 Aligned_cols=252 Identities=20% Similarity=0.337 Sum_probs=196.5
Q ss_pred HHhccccccccccccceeEEEEEEC-CceEEEEEECCCCC-ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEEE
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS-LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLVY 878 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 878 (1099)
..++|++.+.||+|+||.||+|.+. ++..||+|.+.... ...+.+.+|++++++++||||+++++++... ...++||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~lv~ 95 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHD-GKLWIMI 95 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC--CEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeC-CeEEEEE
Confidence 3568999999999999999999986 48899999986543 3457789999999999999999999999854 4569999
Q ss_pred eecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCCC
Q 047739 879 DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTP 958 (1099)
Q Consensus 879 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 958 (1099)
||+++|+|.+++.... ..+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||++.....
T Consensus 96 e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-- 169 (302)
T 2j7t_A 96 EFCPGGAVDAIMLELD----RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK-- 169 (302)
T ss_dssp ECCTTEEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH--
T ss_pred EeCCCCcHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccc--
Confidence 9999999999987532 3489999999999999999999999999999999999999999999999998753210
Q ss_pred CCCccccccccCccccCccccc-----cCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhcccccccc
Q 047739 959 AEASTSTTAVGTLGYVSPEAAL-----TGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLE 1033 (1099)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 1033 (1099)
.........||..|+|||++. +..++.++||||+|+++|||++|+.||...........+.. ........
T Consensus 170 -~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~ 244 (302)
T 2j7t_A 170 -TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK----SDPPTLLT 244 (302)
T ss_dssp -HHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH----SCCCCCSS
T ss_pred -cccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhc----cCCcccCC
Confidence 011223457899999999883 56789999999999999999999999987655443332222 11111100
Q ss_pred CcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1034 PGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
+ ...+ ..+.+++.+||+.||++|||+.|+++
T Consensus 245 ~-------~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 245 P-------SKWS----VEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp G-------GGSC----HHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred c-------cccC----HHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0 0000 12457899999999999999999876
No 263
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1e-34 Score=355.85 Aligned_cols=347 Identities=18% Similarity=0.169 Sum_probs=224.3
Q ss_pred CCCCCCCCCCCCCCCc----ccceEecCCcEeEEecCCCccccccccccccccccceEEccCCccCcccCcccccCCccc
Q 047739 42 GALNGWDSSTPAAPCD----WRGVACTNNRVTELRLPRLQLSGRISDHLSNLRMLRKLSLRSNSFNGTIPATLAQCTLLR 117 (1099)
Q Consensus 42 ~~l~~w~~~~~~~~c~----w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~ 117 (1099)
..+++|.++.+ ||. |.+|.|+. + ++-... .......-..++.++.|++++|.+.+..+..++.+++|+
T Consensus 7 ~~l~~~~~~~~--C~~~~~~~~c~~~~~-~---i~~~~~--~~~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~ 78 (597)
T 3oja_B 7 YNVKPRQPEYK--CIDSNLQYDCVFYDV-H---IDMQTQ--DVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVE 78 (597)
T ss_dssp ----CCCSEEC--CCCC--CCSEEECSC-E---ECSSCC--CCEESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCS
T ss_pred ccccCCCCCCc--CcccCcCceeEecCc-e---eccccc--ccccCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCc
Confidence 45689987543 442 66655541 1 111111 122222334578999999999999865555688999999
Q ss_pred EEEeccccCCCccCcccccCCCCceeecccccCCCcccCCcc--cccceeeCCCCccCCCCCCCCccccccccccccccc
Q 047739 118 AVFLQYNSLSGNLPANIGNLSNLEILNVAANRLSGEIANDLP--RNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNK 195 (1099)
Q Consensus 118 ~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~N~l~~~i~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~ 195 (1099)
+|+|++|.+++..|..++.+++|++|+|++|.+++..|..+. ++|++|+|++|.|++..+..|+++++|++|+|++|+
T Consensus 79 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~ 158 (597)
T 3oja_B 79 LLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNN 158 (597)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCc
Confidence 999999999998888999999999999999999987776655 788888888888886666667888888888888888
Q ss_pred cccccccccccccCccccccCceeEEEccCCcCCccChhhhcCCCCccEEEcccccCCCccCcccccccCCCCCcceEEE
Q 047739 196 FSREVPATFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQ 275 (1099)
Q Consensus 196 l~~~~~~~~~g~lp~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~ 275 (1099)
++ +..|..++.+++|++|++++|.+++.. ++.+++|++|++++|.+++. + .|++++.|+
T Consensus 159 l~--------~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l-~---------~~~~L~~L~ 217 (597)
T 3oja_B 159 LE--------RIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTL-A---------IPIAVEELD 217 (597)
T ss_dssp CC--------BCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEE-E---------CCTTCSEEE
T ss_pred CC--------CCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccc-c---------CCchhheee
Confidence 87 344556777888888888888888753 45578888888888887632 1 223444444
Q ss_pred eccccccccCCCCCCCCCCceeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccC
Q 047739 276 LGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFG 355 (1099)
Q Consensus 276 l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~ 355 (1099)
+++|.+..++... .++|+.|+|++|.+++ +..++.+++|++|+|++|.++
T Consensus 218 ls~n~l~~~~~~~----------------------------~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~ 267 (597)
T 3oja_B 218 ASHNSINVVRGPV----------------------------NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELE 267 (597)
T ss_dssp CCSSCCCEEECSC----------------------------CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCC
T ss_pred ccCCccccccccc----------------------------CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccC
Confidence 4444444433221 1345555555555543 244555555555555555555
Q ss_pred ccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhh
Q 047739 356 GAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVL 435 (1099)
Q Consensus 356 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 435 (1099)
+..|..|..+++|++|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|.+++. + +.
T Consensus 268 ~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~ 342 (597)
T 3oja_B 268 KIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LS 342 (597)
T ss_dssp EEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CC
T ss_pred CCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hh
Confidence 5555555555555555555555553 3444455555555555555555 3444455566666666666666533 2 44
Q ss_pred CCCCCCEEEccCCcCcc
Q 047739 436 GMNNLSTLDLSENKFSG 452 (1099)
Q Consensus 436 ~l~~L~~L~Ls~N~l~~ 452 (1099)
.+++|+.|+|++|.+.+
T Consensus 343 ~~~~L~~L~l~~N~~~~ 359 (597)
T 3oja_B 343 THHTLKNLTLSHNDWDC 359 (597)
T ss_dssp TTCCCSEEECCSSCEEH
T ss_pred hcCCCCEEEeeCCCCCC
Confidence 56667777777776653
No 264
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.7e-35 Score=328.53 Aligned_cols=247 Identities=19% Similarity=0.282 Sum_probs=194.9
Q ss_pred HHhccccccccccccceeEEEEEEC-CceEEEEEECCCC---CccHHHHHHHHHHhhhc-cCCcceEEeeEEecCCCceE
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDG---SLDENLFRKEAEFLGKV-RHRNLTVLRGYYAGAPDLRL 875 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~ 875 (1099)
..++|++.+.||+|+||.||+|... +++.||+|.+... ......+.+|+..+.++ +||||+++++++.+. +..+
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~-~~~~ 87 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAED-DHML 87 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEET-TEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecC-CeEE
Confidence 4578999999999999999999986 6899999998643 33456788999999999 999999999999854 5569
Q ss_pred EEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCC---------------
Q 047739 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDAD--------------- 940 (1099)
Q Consensus 876 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~--------------- 940 (1099)
+||||+++|+|.+++..... ....+++..+..++.|+++||+|||+.+|+||||||+||+++.+
T Consensus 88 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 88 IQNEYCNGGSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EEEECCTTCBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-----------------
T ss_pred EEEEecCCCcHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 99999999999999986432 12458999999999999999999999999999999999999844
Q ss_pred ----CcEEEeccccccccCCCCCCCccccccccCccccCccccccC-CCCCcCchhhHHHHHHHHHhCCCCCCCCCchhH
Q 047739 941 ----FEAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTG-ETTKESDVYSFGIVLLELLTGKRPVMFTQDEDI 1015 (1099)
Q Consensus 941 ----~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~ 1015 (1099)
..+||+|||.+..... .....||..|+|||++.+. .++.++||||+|+++|||++|..|+.... .
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---~ 236 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISS-------PQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD---Q 236 (289)
T ss_dssp ---CCCEEECCCTTCEETTC-------SCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---H
T ss_pred cCCceEEEEcccccccccCC-------ccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh---H
Confidence 4799999999976521 1234599999999998765 56689999999999999999998764321 1
Q ss_pred HHHHHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1016 VKWVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1016 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
...+ ..+..... .+ . .+ ..+.+++.+||+.||++|||+.|+++.
T Consensus 237 ~~~~----~~~~~~~~-~~-------~-~~----~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 237 WHEI----RQGRLPRI-PQ-------V-LS----QEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp HHHH----HTTCCCCC-SS-------C-CC----HHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred HHHH----HcCCCCCC-Cc-------c-cC----HHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 2211 11211111 11 1 01 124578999999999999999999864
No 265
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=3.2e-35 Score=342.58 Aligned_cols=264 Identities=20% Similarity=0.233 Sum_probs=200.4
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCccHHHHHHHHHHhhhcc--------CCcceEEeeEEec---
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFRKEAEFLGKVR--------HRNLTVLRGYYAG--- 869 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~--------H~niv~l~~~~~~--- 869 (1099)
.++|++.++||+|+||.||+|... +++.||+|++.......+.+.+|++++++++ |+||+++++++..
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 367999999999999999999875 5899999999766555678899999999996 7889999998862
Q ss_pred CCCceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccC-CceecCCCCCCEEECCCC-------
Q 047739 870 APDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTS-NMVHGDIKPQNVLFDADF------- 941 (1099)
Q Consensus 870 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-~iiH~Dlk~~NIll~~~~------- 941 (1099)
.....++||||+ +|++.+++... ....+++..+..++.||+.||+|||+. ||+||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~ 191 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWIIKS---NYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLA 191 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHH
T ss_pred CCceEEEEEecc-CccHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhh
Confidence 334568999999 56777777642 224589999999999999999999998 999999999999999775
Q ss_pred ------------------------------------------cEEEeccccccccCCCCCCCccccccccCccccCcccc
Q 047739 942 ------------------------------------------EAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAA 979 (1099)
Q Consensus 942 ------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 979 (1099)
.+||+|||+++.... .....+||..|+|||++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~------~~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK------HFTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB------CSCSCCSCGGGCCHHHH
T ss_pred hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccc------cCccCCCCCcccCChhh
Confidence 799999999986521 23445799999999999
Q ss_pred ccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCch------hHHHHHHHHhhh--------cccc-ccccC--cc---cCC
Q 047739 980 LTGETTKESDVYSFGIVLLELLTGKRPVMFTQDE------DIVKWVKKQLQK--------GQIT-ELLEP--GL---LEL 1039 (1099)
Q Consensus 980 ~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~------~~~~~~~~~~~~--------~~~~-~~~d~--~~---~~~ 1039 (1099)
.+..++.++|||||||++|||++|+.||...... .....+...... +... +.+.. .+ ...
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL 345 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence 9999999999999999999999999999764432 122222221111 0000 00000 00 000
Q ss_pred CCC----------ChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1040 DPE----------SSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1040 ~~~----------~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
.+. ....+.-..+.+++.+||+.||++|||++|+++
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 000 001222344678999999999999999999986
No 266
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.2e-35 Score=338.19 Aligned_cols=252 Identities=19% Similarity=0.311 Sum_probs=194.5
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCc--cHHHHHHHHHH-hhhccCCcceEEeeEEecCCCceEEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL--DENLFRKEAEF-LGKVRHRNLTVLRGYYAGAPDLRLLV 877 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~~lV 877 (1099)
.++|+..+.||+|+||.||+|... +|+.||+|++..... ....+..|..+ ++.++||||+++++++... +..++|
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~-~~~~lv 128 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFRE-GDVWIC 128 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECS-SCEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeC-CcEEEE
Confidence 467899999999999999999974 689999999865433 23455566655 7788999999999999854 456999
Q ss_pred EeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccC-CceecCCCCCCEEECCCCcEEEeccccccccCC
Q 047739 878 YDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTS-NMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIP 956 (1099)
Q Consensus 878 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 956 (1099)
|||+++ +|.+++..... ....+++..+..++.||++||+|||+. ||+||||||+||+++.++.+||+|||+++...
T Consensus 129 ~e~~~~-~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~- 205 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV- 205 (340)
T ss_dssp ECCCSE-EHHHHHHHHHH-TSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHS-
T ss_pred HHHhhC-cHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCceecc-
Confidence 999975 99999875322 335689999999999999999999987 99999999999999999999999999997652
Q ss_pred CCCCCccccccccCccccCccccc----cCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccc
Q 047739 957 TPAEASTSTTAVGTLGYVSPEAAL----TGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELL 1032 (1099)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1099)
.........||..|+|||++. ...++.++|||||||++|||++|+.||....... ..+....... .....
T Consensus 206 ---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~--~~~~~~~~~~-~~~~~ 279 (340)
T 3an0_A 206 ---DSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF--QQLKQVVEEP-SPQLP 279 (340)
T ss_dssp ---CHHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH--HHHHHHHHSC-CCCCC
T ss_pred ---cccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchH--HHHHHHhcCC-CCCCC
Confidence 112233457999999999964 3468899999999999999999999997543321 1112221111 11110
Q ss_pred cCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1033 EPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1033 d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
...+ . ..+.+++.+||+.||++||++.|+++
T Consensus 280 ~~~~--------~----~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 280 ADKF--------S----AEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp GGGS--------C----HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cccC--------C----HHHHHHHHHHccCCcccCcCHHHHhc
Confidence 0000 0 13468899999999999999999987
No 267
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=6.8e-35 Score=335.78 Aligned_cols=259 Identities=22% Similarity=0.277 Sum_probs=198.2
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCcc---HHHHHHHHHHhhhccCCcceEEeeEEecCCCc----
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLD---ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL---- 873 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~---- 873 (1099)
.++|...+.||+|+||.||+|.+. +|+.||+|++...... .+.+.+|++++++++||||+++++++......
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 468999999999999999999875 5899999999654333 36788999999999999999999999754332
Q ss_pred -eEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccc
Q 047739 874 -RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR 952 (1099)
Q Consensus 874 -~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~ 952 (1099)
.++||||++ |+|.+++.. .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 192 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM-------EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR 192 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC-
T ss_pred eEEEEEcccc-ccHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCccc
Confidence 389999997 688877742 38999999999999999999999999999999999999999999999999997
Q ss_pred ccCCCCCCCccccccccCccccCcccccc-CCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccc--c
Q 047739 953 LTIPTPAEASTSTTAVGTLGYVSPEAALT-GETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQI--T 1029 (1099)
Q Consensus 953 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~--~ 1029 (1099)
... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+....+......... .
T Consensus 193 ~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 266 (371)
T 4exu_A 193 HAD------AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFV 266 (371)
T ss_dssp -------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred ccc------cCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHH
Confidence 542 12344678999999999887 67899999999999999999999999877665555544432221100 0
Q ss_pred cccc--------CcccCCCCCChhHHH-----HHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1030 ELLE--------PGLLELDPESSEWEE-----FLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1030 ~~~d--------~~~~~~~~~~~~~~~-----~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
..+. ...... ....+.. -..+.+++.+||+.||++|||++|+++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 267 QKLNDKAAKSYIQSLPQT--PRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp TTCSCHHHHHHHHHSCCC--CCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHhhhhhhhhhhhccCCC--cchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0000 000000 0000000 1235689999999999999999999874
No 268
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.8e-34 Score=330.35 Aligned_cols=256 Identities=21% Similarity=0.267 Sum_probs=197.3
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCcc---HHHHHHHHHHhhhccCCcceEEeeEEecCCC-----
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLD---ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPD----- 872 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----- 872 (1099)
.++|...+.||+|+||.||+|.+. +|+.||+|.+...... .+.+.+|+.++++++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 357899999999999999999985 5899999998654332 3568899999999999999999999875432
Q ss_pred ceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEecccccc
Q 047739 873 LRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR 952 (1099)
Q Consensus 873 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~ 952 (1099)
..++||||++ |+|.+++.. .+++..+..++.||++||+|||+.||+||||||+||+++.++.+||+|||+++
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~ 174 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL-------KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR 174 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS-------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTT
T ss_pred eEEEEecccc-CCHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeeccccc
Confidence 2489999997 688877742 38999999999999999999999999999999999999999999999999997
Q ss_pred ccCCCCCCCccccccccCccccCcccccc-CCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhcc----
Q 047739 953 LTIPTPAEASTSTTAVGTLGYVSPEAALT-GETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ---- 1027 (1099)
Q Consensus 953 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~---- 1027 (1099)
... .......||..|+|||++.+ ..++.++||||+|+++|||++|+.||......+....+........
T Consensus 175 ~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 248 (353)
T 3coi_A 175 HAD------AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFV 248 (353)
T ss_dssp C--------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHH
T ss_pred CCC------CCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 542 12334578999999999887 6789999999999999999999999987766555444443221110
Q ss_pred --------------ccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1028 --------------ITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1028 --------------~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
+.......+....+.. -..+.+++.+|++.||++|||++|+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 249 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRA-----SPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp TTCSCHHHHHHHHTSCBCSSCCTTTTCTTS-----CHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHhhHHHHHHHHhCcCCCCccHHHhcCCc-----CHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000001111111110 1234688999999999999999999863
No 269
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=4e-35 Score=328.06 Aligned_cols=256 Identities=21% Similarity=0.344 Sum_probs=190.9
Q ss_pred HHhccccccccccccceeEEEEEEC-CceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEecC---------
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAGA--------- 870 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--------- 870 (1099)
..++|+..+.||+|+||.||+|... +|+.||+|.+.......+.+.+|++++++++||||+++++++.+.
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 3568999999999999999999975 689999999865444457789999999999999999999988643
Q ss_pred ---CCceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEec
Q 047739 871 ---PDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSD 947 (1099)
Q Consensus 871 ---~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~D 947 (1099)
....++||||+++|+|.+++... ...+++..++.++.|+++||+|||+.||+||||||+||+++.++.+||+|
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSE----NLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHS----CGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECC
T ss_pred cccCCceEEEEecCCCCCHHHhhhcc----ccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEee
Confidence 34568999999999999999752 23478889999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCC-----------CCccccccccCccccCccccccC-CCCCcCchhhHHHHHHHHHhCCCCCCCCCchhH
Q 047739 948 FGLDRLTIPTPA-----------EASTSTTAVGTLGYVSPEAALTG-ETTKESDVYSFGIVLLELLTGKRPVMFTQDEDI 1015 (1099)
Q Consensus 948 fGla~~~~~~~~-----------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~ 1015 (1099)
||+++....... .........||..|+|||++.+. .++.++||||+|+++|||++ ||.... +.
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~--~~ 234 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM--ER 234 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH--HH
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch--hH
Confidence 999976532110 01223456799999999998764 68999999999999999998 553211 11
Q ss_pred HHHHHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1016 VKWVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1016 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
... ...+..... ...+.+. .. ....+.+++.+||+.||++|||+.|+++.
T Consensus 235 ~~~-~~~~~~~~~--~~~~~~~----~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 235 VNI-LKKLRSVSI--EFPPDFD----DN----KMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHH-HHHHHSTTC--CCCTTCC----TT----TSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHH-HHhcccccc--ccCcccc----cc----chHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 111 111111110 0111110 00 01224578999999999999999999874
No 270
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=6.2e-35 Score=323.89 Aligned_cols=251 Identities=22% Similarity=0.314 Sum_probs=201.1
Q ss_pred HHHhccccccccccccceeEEEEEEC-CceEEEEEECCCC---CccHHHHHHHHHHhhhccCCcceEEeeEEecCCCceE
Q 047739 800 EATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDG---SLDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRL 875 (1099)
Q Consensus 800 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 875 (1099)
...++|++.+.||+|+||.||+|... +++.||+|.+... ....+.+.+|++++++++||||+++++++.. ....+
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 97 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-SSSFY 97 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeC-CCeEE
Confidence 45678999999999999999999986 6889999998532 2345778999999999999999999999985 45569
Q ss_pred EEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCC---CcEEEecccccc
Q 047739 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDAD---FEAHLSDFGLDR 952 (1099)
Q Consensus 876 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~---~~~kl~DfGla~ 952 (1099)
+||||+++++|.+++... ..+++..+..++.|+++||+|||+.||+||||||+||+++.+ +.+||+|||+++
T Consensus 98 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~ 172 (287)
T 2wei_A 98 IVGELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (287)
T ss_dssp EEECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred EEEEccCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcce
Confidence 999999999999998753 248999999999999999999999999999999999999754 479999999997
Q ss_pred ccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccc
Q 047739 953 LTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELL 1032 (1099)
Q Consensus 953 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1099)
..... .......||..|+|||.+.+ .++.++||||+|+++|||++|+.||......+....+.. +......
T Consensus 173 ~~~~~----~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~~~ 243 (287)
T 2wei_A 173 CFQQN----TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVET----GKYAFDL 243 (287)
T ss_dssp TBCCC----SSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH----CCCCCCS
T ss_pred eecCC----CccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc----CCCCCCc
Confidence 65221 22234568999999998865 589999999999999999999999987665554443332 2111000
Q ss_pred cCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1033 EPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1033 d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
+.+... . ..+.+++.+||+.||++|||+.|+++
T Consensus 244 -~~~~~~---~------~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 244 -PQWRTI---S------DDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp -GGGTTS---C------HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -hhhhhc---C------HHHHHHHHHHcccChhhCcCHHHHhc
Confidence 000000 0 12457999999999999999999997
No 271
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=9.8e-36 Score=340.25 Aligned_cols=263 Identities=17% Similarity=0.285 Sum_probs=201.3
Q ss_pred HhccccccccccccceeEEEEEECCceEEEEEECCCCCcc------------------HHHHHHHHHHhhhccCCcceEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLD------------------ENLFRKEAEFLGKVRHRNLTVL 863 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~------------------~~~~~~E~~~l~~l~H~niv~l 863 (1099)
.++|.+.+.||+|+||.||+|.+ +|+.||+|.+...... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 35799999999999999999999 8999999998532211 1789999999999999999999
Q ss_pred eeEEecCCCceEEEEeecCCCCHHHHHhhh---ccCCCCCCCHHHHHHHHHHHHHHHHHHcc-CCceecCCCCCCEEECC
Q 047739 864 RGYYAGAPDLRLLVYDYMPNGNLGTLLQEA---SHQDGHVLNWPMRHLIALGVARGLAFLHT-SNMVHGDIKPQNVLFDA 939 (1099)
Q Consensus 864 ~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~---~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~iiH~Dlk~~NIll~~ 939 (1099)
++++.+. +..++||||+++|+|.+++... .......+++..+..++.|++.||+|||+ .||+||||||+||+++.
T Consensus 109 ~~~~~~~-~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~ 187 (348)
T 2pml_X 109 EGIITNY-DEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDK 187 (348)
T ss_dssp SEEEESS-SEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECT
T ss_pred EEEEeeC-CeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcC
Confidence 9999854 5679999999999999983321 11124568999999999999999999999 99999999999999999
Q ss_pred CCcEEEeccccccccCCCCCCCccccccccCccccCccccccC-CCCC-cCchhhHHHHHHHHHhCCCCCCCCCc-hhHH
Q 047739 940 DFEAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTG-ETTK-ESDVYSFGIVLLELLTGKRPVMFTQD-EDIV 1016 (1099)
Q Consensus 940 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DV~S~G~il~elltg~~P~~~~~~-~~~~ 1016 (1099)
++.+||+|||.++.... .......||..|+|||.+.+. .++. ++||||+|+++|||++|+.||..... .+..
T Consensus 188 ~~~~kl~dfg~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 262 (348)
T 2pml_X 188 NGRVKLSDFGESEYMVD-----KKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELF 262 (348)
T ss_dssp TSCEEECCCTTCEECBT-----TEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHH
T ss_pred CCcEEEecccccccccc-----ccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Confidence 99999999999976422 134456799999999999877 5666 99999999999999999999987655 3333
Q ss_pred HHHHHHhhhcccccccc--CcccCCCCC--Chh-HHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1017 KWVKKQLQKGQITELLE--PGLLELDPE--SSE-WEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1017 ~~~~~~~~~~~~~~~~d--~~~~~~~~~--~~~-~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
..+.. +......+ ......... ... ...-..+.+++.+||+.||.+||++.|+++
T Consensus 263 ~~i~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 263 NNIRT----KNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HHHTS----CCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHhc----cCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 33222 21110000 000000000 000 000123468999999999999999999987
No 272
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=3.1e-35 Score=339.63 Aligned_cols=269 Identities=17% Similarity=0.206 Sum_probs=201.2
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCccHHHHHHHHHHhhhcc-----------CCcceEEeeEEec
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFRKEAEFLGKVR-----------HRNLTVLRGYYAG 869 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~~~~~~ 869 (1099)
..+|.+.+.||+|+||.||+|... +++.||+|.+.......+.+.+|++++++++ ||||+++++++..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 357999999999999999999974 6899999999876666678899999999986 8999999999874
Q ss_pred CC---CceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccC-CceecCCCCCCEEEC------C
Q 047739 870 AP---DLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTS-NMVHGDIKPQNVLFD------A 939 (1099)
Q Consensus 870 ~~---~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-~iiH~Dlk~~NIll~------~ 939 (1099)
.. ...++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+. ||+||||||+||+++ .
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~ 173 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYE---HRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPEN 173 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTT
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhh---ccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcC
Confidence 32 2568999999 889999998632 23489999999999999999999998 999999999999994 4
Q ss_pred CCcEEEeccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCch------
Q 047739 940 DFEAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDE------ 1013 (1099)
Q Consensus 940 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~------ 1013 (1099)
.+.+||+|||+++.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......
T Consensus 174 ~~~~kl~Dfg~a~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 174 LIQIKIADLGNACWYDE------HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp EEEEEECCCTTCEETTB------CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred cceEEEcccccccccCC------CCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 45899999999976521 233457899999999999999999999999999999999999999754321
Q ss_pred hHHHHHHHHhhhcccccc-----------cc-----CcccCCCC----------CChhHHHHHHHHHHHHhcCCCCCCCC
Q 047739 1014 DIVKWVKKQLQKGQITEL-----------LE-----PGLLELDP----------ESSEWEEFLLGVKVALLCTAPDPIDR 1067 (1099)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~-----------~d-----~~~~~~~~----------~~~~~~~~~~~~~li~~Cl~~dP~~R 1067 (1099)
+....+..... ..+.. +. ........ ...+...-..+.+++.+||+.||++|
T Consensus 248 ~~~~~~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 325 (373)
T 1q8y_A 248 DHIAQIIELLG--ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKR 325 (373)
T ss_dssp HHHHHHHHHHC--SCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTC
T ss_pred HHHHHHHHhcC--CCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCcccc
Confidence 11222222111 11000 00 00000000 00011222345689999999999999
Q ss_pred CCHHHHHH--HhhcccC
Q 047739 1068 PTMSDIVF--MLEGCRV 1082 (1099)
Q Consensus 1068 Ps~~evl~--~L~~~~~ 1082 (1099)
||++|+++ .+.+...
T Consensus 326 pt~~ell~hp~f~~~~~ 342 (373)
T 1q8y_A 326 ADAGGLVNHPWLKDTLG 342 (373)
T ss_dssp BCHHHHHTCGGGTTCTT
T ss_pred CCHHHHhhChhhhcccC
Confidence 99999998 4554433
No 273
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=5.2e-34 Score=331.18 Aligned_cols=308 Identities=19% Similarity=0.216 Sum_probs=171.9
Q ss_pred CceeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEc
Q 047739 294 SVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDL 373 (1099)
Q Consensus 294 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 373 (1099)
++++.|++++|.++.+.+..|..+++|++|+|++|.+++..+..|+++++|++|+|++|.+++..|..+..+++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 45566666666665544444555666666666666665555555556666666666666655555555555555555555
Q ss_pred cCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccc
Q 047739 374 EGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGE 453 (1099)
Q Consensus 374 s~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 453 (1099)
++|+++...+..|.++++|++|++++|.+++..+..|.++++|++|++++|++++. .+..+++|+.|++
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l-------- 193 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANV-------- 193 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEEC--------
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeec--------
Confidence 55555533233345555555555555555544444555555555555555555432 1233444444444
Q ss_pred cCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhcc
Q 047739 454 VPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSL 533 (1099)
Q Consensus 454 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 533 (1099)
++|.+++. ....+|++|++++|.+... |.. ..++|+.|++++|.+++. ..+..+
T Consensus 194 ----------------~~n~l~~~-----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l 247 (390)
T 3o6n_A 194 ----------------SYNLLSTL-----AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNY 247 (390)
T ss_dssp ----------------CSSCCSEE-----ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGC
T ss_pred ----------------cccccccc-----CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCC
Confidence 44444321 1123455555555555532 211 234566666666666532 355666
Q ss_pred cccceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccCcccEEec
Q 047739 534 MSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDL 613 (1099)
Q Consensus 534 ~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 613 (1099)
++|++|++++|.+++..|..+..+++|+.|++++|++++ +|..+..+++|++|+|++|+++ .+|..+..+++|+.|+|
T Consensus 248 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L 325 (390)
T 3o6n_A 248 PGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYL 325 (390)
T ss_dssp TTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEEC
T ss_pred CCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEEC
Confidence 666666666666666556666666666666666666653 4555566667777777777776 45666666677777777
Q ss_pred cCccccccCCcccCCCCCCCEEECcCcccc
Q 047739 614 SINNLTGEIPDEISKCSSLRSLLVNSNHLS 643 (1099)
Q Consensus 614 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 643 (1099)
++|++++ +| +..+++|+.|++++|++.
T Consensus 326 ~~N~i~~-~~--~~~~~~L~~L~l~~N~~~ 352 (390)
T 3o6n_A 326 DHNSIVT-LK--LSTHHTLKNLTLSHNDWD 352 (390)
T ss_dssp CSSCCCC-CC--CCTTCCCSEEECCSSCEE
T ss_pred CCCccce-eC--chhhccCCEEEcCCCCcc
Confidence 7776663 33 455556666666666555
No 274
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.6e-34 Score=329.35 Aligned_cols=263 Identities=19% Similarity=0.283 Sum_probs=201.9
Q ss_pred HhccccccccccccceeEEEEEEC-C-ceEEEEEECCCCCccHHHHHHHHHHhhhccCCc------ceEEeeEEecCCCc
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-D-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRN------LTVLRGYYAGAPDL 873 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~-g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~~~~~ 873 (1099)
.++|++.+.||+|+||.||+|... + +..||+|.+.......+.+.+|++++++++|++ ++.+++++... ..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH-GH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET-TE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC-Ce
Confidence 468999999999999999999975 3 479999999765555678899999999998766 89999988754 45
Q ss_pred eEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEE----------------
Q 047739 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLF---------------- 937 (1099)
Q Consensus 874 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll---------------- 937 (1099)
.++||||+ +|++.+++... ....+++..+..++.||++||+|||+.||+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~---~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKEN---NFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccccccccccc
Confidence 69999999 67888887653 22458999999999999999999999999999999999999
Q ss_pred ---CCCCcEEEeccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchh
Q 047739 938 ---DADFEAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDED 1014 (1099)
Q Consensus 938 ---~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~ 1014 (1099)
+.++.+||+|||+++.... ......||..|+|||++.+..++.++||||+||++|||++|+.||......+
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 246 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHE------HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 246 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTS------CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred ccccCCCcEEEeecCccccccc------cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 5678999999999975421 2234679999999999999999999999999999999999999998776655
Q ss_pred HHHHHHHHhhhcc--------ccccccCcccCCCCC------------------ChhHHHHHHHHHHHHhcCCCCCCCCC
Q 047739 1015 IVKWVKKQLQKGQ--------ITELLEPGLLELDPE------------------SSEWEEFLLGVKVALLCTAPDPIDRP 1068 (1099)
Q Consensus 1015 ~~~~~~~~~~~~~--------~~~~~d~~~~~~~~~------------------~~~~~~~~~~~~li~~Cl~~dP~~RP 1068 (1099)
....+........ ........-...... ......-..+.+++.+||+.||++||
T Consensus 247 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 326 (355)
T 2eu9_A 247 HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRI 326 (355)
T ss_dssp HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCc
Confidence 5444433321100 000000000000000 00011122456899999999999999
Q ss_pred CHHHHHH
Q 047739 1069 TMSDIVF 1075 (1099)
Q Consensus 1069 s~~evl~ 1075 (1099)
|++|+++
T Consensus 327 t~~e~l~ 333 (355)
T 2eu9_A 327 TLAEALL 333 (355)
T ss_dssp CHHHHTT
T ss_pred CHHHHhc
Confidence 9999985
No 275
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=7.3e-35 Score=327.67 Aligned_cols=252 Identities=20% Similarity=0.286 Sum_probs=191.1
Q ss_pred HHhccccccccccccceeEEEEEECCceEEEEEECCCCCc---cHHHHHHHHHHhhhcc--CCcceEEeeEEecCCCceE
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSL---DENLFRKEAEFLGKVR--HRNLTVLRGYYAGAPDLRL 875 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~~ 875 (1099)
..++|++.+.||+|+||.||+|...+++.||+|.+..... ..+.+.+|++++++++ ||||+++++++.. +...+
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~-~~~~~ 104 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-DQYIY 104 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC-SSEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec-CCEEE
Confidence 3567999999999999999999998899999999854332 3467899999999997 5999999999985 45579
Q ss_pred EEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccC
Q 047739 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTI 955 (1099)
Q Consensus 876 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 955 (1099)
+||| +.+++|.+++... ..+++..+..++.|+++||+|||+.+|+||||||+||++++ +.+||+|||+++...
T Consensus 105 lv~e-~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~ 177 (313)
T 3cek_A 105 MVME-CGNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQ 177 (313)
T ss_dssp EEEC-CCSEEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-TEEEECCCSSSCC--
T ss_pred EEEe-cCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC-CeEEEeecccccccc
Confidence 9999 5578999999853 34889999999999999999999999999999999999965 899999999998653
Q ss_pred CCCCCCccccccccCccccCcccccc-----------CCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhh
Q 047739 956 PTPAEASTSTTAVGTLGYVSPEAALT-----------GETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQ 1024 (1099)
Q Consensus 956 ~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~ 1024 (1099)
... .........||+.|+|||.+.+ ..++.++||||||+++|||++|+.||....... ..+.....
T Consensus 178 ~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~--~~~~~~~~ 254 (313)
T 3cek_A 178 PDT-TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI--SKLHAIID 254 (313)
T ss_dssp -------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH--HHHHHHHC
T ss_pred Ccc-ccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH--HHHHHHHh
Confidence 221 1122345679999999999875 468889999999999999999999997543321 11111111
Q ss_pred hccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1025 KGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1025 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
... .. .+ . ...+ ..+.+++.+||+.||++||++.|+++.
T Consensus 255 ~~~-~~----~~---~-~~~~----~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 255 PNH-EI----EF---P-DIPE----KDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp TTS-CC----CC---C-CCSC----HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccc-cc----CC---c-ccch----HHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 110 00 00 0 1111 134578999999999999999999974
No 276
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=9.8e-35 Score=329.63 Aligned_cols=260 Identities=22% Similarity=0.321 Sum_probs=173.0
Q ss_pred HHhccccc-cccccccceeEEEEEEC-CceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeEEec---CCCceE
Q 047739 801 ATRQFDEE-NVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGYYAG---APDLRL 875 (1099)
Q Consensus 801 ~~~~~~~~-~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~---~~~~~~ 875 (1099)
..++|.+. ++||+|+||.||+|.+. +|+.||+|++.... ....+....++.++||||+++++++.. .....+
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP---KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH---HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH---HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 35678884 56999999999999987 58999999985432 222233344566799999999999864 233468
Q ss_pred EEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECC---CCcEEEecccccc
Q 047739 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDA---DFEAHLSDFGLDR 952 (1099)
Q Consensus 876 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~---~~~~kl~DfGla~ 952 (1099)
+||||+++|+|.+++... ....+++..+..++.|+++||+|||+.||+||||||+||+++. ++.+||+|||+++
T Consensus 103 lv~e~~~gg~L~~~l~~~---~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQER---GDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp EEEECCTTEEHHHHHHTC----CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEeccCCCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 999999999999999853 2346899999999999999999999999999999999999976 4559999999997
Q ss_pred ccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccc
Q 047739 953 LTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELL 1032 (1099)
Q Consensus 953 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1099)
... ........||+.|+|||++.+..++.++||||+|+++|||++|+.||..................+.. ...
T Consensus 180 ~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~ 253 (336)
T 3fhr_A 180 ETT-----QNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQY-GFP 253 (336)
T ss_dssp EC---------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------CCC
T ss_pred ecc-----ccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhcccc-ccC
Confidence 542 12233467899999999998888999999999999999999999999765544332222222111111 001
Q ss_pred cCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH--Hhhccc
Q 047739 1033 EPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF--MLEGCR 1081 (1099)
Q Consensus 1033 d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~--~L~~~~ 1081 (1099)
.+.+. ... ..+.+++.+||+.||++|||+.|+++ .+.+..
T Consensus 254 ~~~~~-----~~~----~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 295 (336)
T 3fhr_A 254 NPEWS-----EVS----EDAKQLIRLLLKTDPTERLTITQFMNHPWINQSM 295 (336)
T ss_dssp TTTST-----TCC----HHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGG
T ss_pred chhhc-----cCC----HHHHHHHHHHCCCChhHCcCHHHHhcCccccccc
Confidence 11110 001 12457899999999999999999998 555443
No 277
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=5.3e-35 Score=331.02 Aligned_cols=256 Identities=20% Similarity=0.305 Sum_probs=175.6
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCc--cHHHHHHHHH-HhhhccCCcceEEeeEEecCCCceEEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL--DENLFRKEAE-FLGKVRHRNLTVLRGYYAGAPDLRLLV 877 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~~lV 877 (1099)
.++|...+.||+|+||.||+|... +|+.||+|.+..... ....+.+|+. +++.++||||+++++++... +..++|
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~-~~~~lv 99 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFRE-GDCWIC 99 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECS-SEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeC-CceEEE
Confidence 367899999999999999999985 689999999865432 2344556665 77778999999999999854 556999
Q ss_pred EeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccC-CceecCCCCCCEEECCCCcEEEeccccccccCC
Q 047739 878 YDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTS-NMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIP 956 (1099)
Q Consensus 878 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 956 (1099)
|||++ |+|.+++..........+++..+..++.|+++||+|||+. ||+||||||+||+++.++.+||+|||+++....
T Consensus 100 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 100 MELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp ECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred EeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 99997 4888888754333446689999999999999999999999 999999999999999999999999999976522
Q ss_pred CCCCCccccccccCccccCcccc----ccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccc
Q 047739 957 TPAEASTSTTAVGTLGYVSPEAA----LTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELL 1032 (1099)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1099)
........||..|+|||++ .+..++.++||||||+++|||++|+.||...... ...+.. ...+......
T Consensus 179 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~-~~~~~~~~~~ 251 (327)
T 3aln_A 179 ----SIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV--FDQLTQ-VVKGDPPQLS 251 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC---------CC-CCCSCCCCCC
T ss_pred ----ccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH--HHHHHH-HhcCCCCCCC
Confidence 1222344799999999998 4567899999999999999999999999754321 111110 1111111110
Q ss_pred cCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1033 EPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1033 d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
... ..... ..+.+++.+||+.||++||++.|+++
T Consensus 252 ~~~-----~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 252 NSE-----EREFS----PSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCS-----SCCCC----HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred Ccc-----cccCC----HHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 000 00011 13467899999999999999999975
No 278
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.1e-34 Score=327.49 Aligned_cols=276 Identities=23% Similarity=0.295 Sum_probs=210.5
Q ss_pred CChhhHHHHHHHHHhC-CCCCCCCCCCCC--CCCCCCCcccceEecC----------CcEeEEecCCCcccccccccccc
Q 047739 22 DRSPEIEALTSFKLNL-HDPLGALNGWDS--STPAAPCDWRGVACTN----------NRVTELRLPRLQLSGRISDHLSN 88 (1099)
Q Consensus 22 ~~~~~~~~l~~~k~~~-~~~~~~l~~w~~--~~~~~~c~w~gv~c~~----------~~v~~l~l~~~~l~g~~~~~l~~ 88 (1099)
+..+|+.||++||+++ .||.+.+.+|.. .....+|.|.||+|+. .+|+.|+|+++++. .+|+.+++
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~ 102 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFR 102 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGG
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhhh
Confidence 3458999999999999 688888889941 1234579999999952 78999999999998 89999999
Q ss_pred ccccceEEccCCccCcccCcccccCCcccEEEeccccCCCccCcccccCCCCceeecccccCCCcccCCcccccceeeCC
Q 047739 89 LRMLRKLSLRSNSFNGTIPATLAQCTLLRAVFLQYNSLSGNLPANIGNLSNLEILNVAANRLSGEIANDLPRNLKYFDLS 168 (1099)
Q Consensus 89 l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~N~l~~~i~~~~~~~L~~L~ls 168 (1099)
+++|++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..++++++|++|+|++|++.+.+|..+...
T Consensus 103 l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~------- 173 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAST------- 173 (328)
T ss_dssp GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEE-------
T ss_pred CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhc-------
Confidence 999999999999999 89999999999999999999999 889999999999999999999988888765421
Q ss_pred CCccCCCCCCCCccccccccccccccccccccccccccccCccccccCceeEEEccCCcCCccChhhhcCCCCccEEEcc
Q 047739 169 SNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLA 248 (1099)
Q Consensus 169 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls 248 (1099)
.++..|+++++|++|+|++|+++ .+|..++.+++|++|++++|++++ +|..|+.+++|++|+|+
T Consensus 174 ------~~~~~~~~l~~L~~L~L~~n~l~---------~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls 237 (328)
T 4fcg_A 174 ------DASGEHQGLVNLQSLRLEWTGIR---------SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLR 237 (328)
T ss_dssp ------C-CCCEEESTTCCEEEEEEECCC---------CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECT
T ss_pred ------cchhhhccCCCCCEEECcCCCcC---------cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECc
Confidence 22345677899999999999887 577788889999999999999986 55578899999999999
Q ss_pred cccCCCccCcccccccCCCCCcceEEEeccccccccCCCCCCCCCCceeEEEcCCCccccCcchhccCCCCccEEeCCCC
Q 047739 249 QNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGN 328 (1099)
Q Consensus 249 ~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 328 (1099)
+|++.+.+|..+ ..+++|++|+|++|.+.+.+|..+..+++|++|+|++|
T Consensus 238 ~n~~~~~~p~~~------------------------------~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n 287 (328)
T 4fcg_A 238 GCTALRNYPPIF------------------------------GGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGC 287 (328)
T ss_dssp TCTTCCBCCCCT------------------------------TCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTC
T ss_pred CCcchhhhHHHh------------------------------cCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCC
Confidence 988876554421 11334555555555554455555555555555555555
Q ss_pred ccccCchhhhCCCCCCCEEEccCCc
Q 047739 329 SISGKIPAQIGGLWRLEELKMANNS 353 (1099)
Q Consensus 329 ~i~~~~p~~~~~l~~L~~L~L~~n~ 353 (1099)
.+.+.+|..|+++++|+.+++..+.
T Consensus 288 ~~~~~iP~~l~~L~~L~~l~l~~~~ 312 (328)
T 4fcg_A 288 VNLSRLPSLIAQLPANCIILVPPHL 312 (328)
T ss_dssp TTCCCCCGGGGGSCTTCEEECCGGG
T ss_pred CchhhccHHHhhccCceEEeCCHHH
Confidence 5555555555555555555544443
No 279
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=9.4e-34 Score=347.30 Aligned_cols=311 Identities=20% Similarity=0.191 Sum_probs=229.1
Q ss_pred CCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEE
Q 047739 341 LWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLN 420 (1099)
Q Consensus 341 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 420 (1099)
+.+++.|++++|.++...+..+..+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 56788999999999877777788889999999999999877777888888888888888888888888888888888888
Q ss_pred cccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcc
Q 047739 421 LRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSG 500 (1099)
Q Consensus 421 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 500 (1099)
|++|.+++..+..|.++++|++|+|++|.+++..|..|+++++|+.|+|++|.+++. .++.+++|+.|++++|.+++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCCSE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCcccc
Confidence 888888865555568888888888888888888888888888888888888888754 25566778888888887763
Q ss_pred cCCcccCCCCccceeeeccccccCCCchhhhcccccceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCC
Q 047739 501 ELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGN 580 (1099)
Q Consensus 501 ~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~ 580 (1099)
+...++|+.|++++|.++.. +..+ .++|+.|+|++|.+++ +..+..+++|+.|++++|.+++.+|..|++
T Consensus 207 -----l~~~~~L~~L~ls~n~l~~~-~~~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 276 (597)
T 3oja_B 207 -----LAIPIAVEELDASHNSINVV-RGPV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVK 276 (597)
T ss_dssp -----EECCTTCSEEECCSSCCCEE-ECSC--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTT
T ss_pred -----ccCCchhheeeccCCccccc-cccc--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcC
Confidence 23345677777777777633 2222 2567777777777764 355666677777777777776666666666
Q ss_pred CCCCceEEecCCcccCcCCcchhccCcccEEeccCccccccCCcccCCCCCCCEEECcCccccccCChhhhccCCCCeee
Q 047739 581 CSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLD 660 (1099)
Q Consensus 581 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 660 (1099)
+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..++.+++|+.|+|++|++++. | +..+++|+.|+
T Consensus 277 l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~ 351 (597)
T 3oja_B 277 MQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLT 351 (597)
T ss_dssp CSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEE
T ss_pred ccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEE
Confidence 7777777777777763 4555566667777777777766 4666666667777777777776633 2 45566666777
Q ss_pred cCCCcCCCc
Q 047739 661 LSANNLSGE 669 (1099)
Q Consensus 661 ls~N~l~~~ 669 (1099)
+++|++++.
T Consensus 352 l~~N~~~~~ 360 (597)
T 3oja_B 352 LSHNDWDCN 360 (597)
T ss_dssp CCSSCEEHH
T ss_pred eeCCCCCCh
Confidence 777766643
No 280
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=338.76 Aligned_cols=251 Identities=21% Similarity=0.300 Sum_probs=183.8
Q ss_pred HhccccccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhc-cCCcceEEeeEEecCCCceEEEEee
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKV-RHRNLTVLRGYYAGAPDLRLLVYDY 880 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV~e~ 880 (1099)
..+|...++||+|+||+||.....+|+.||||++..... ..+.+|+++++++ +|||||++++++.+ ....|+||||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~--~~~~~E~~~l~~l~~HpnIv~l~~~~~~-~~~~~lv~E~ 99 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF--SFADREVQLLRESDEHPNVIRYFCTEKD-RQFQYIAIEL 99 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE--EECHHHHHHHHHSCCCTTBCCEEEEEEE-TTEEEEEEEC
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH--HHHHHHHHHHHhccCCCCcCeEEEEEec-CCEEEEEEEC
Confidence 346889999999999997666666789999999865432 3467899999999 79999999999884 4556999999
Q ss_pred cCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECC-----CCcEEEeccccccccC
Q 047739 881 MPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDA-----DFEAHLSDFGLDRLTI 955 (1099)
Q Consensus 881 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~-----~~~~kl~DfGla~~~~ 955 (1099)
+. |+|.+++.... ....+.....++.||++||+|||+.+|+||||||+||+++. ...+||+|||+|+...
T Consensus 100 ~~-g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~ 174 (432)
T 3p23_A 100 CA-ATLQEYVEQKD----FAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174 (432)
T ss_dssp CS-EEHHHHHHSSS----CCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred CC-CCHHHHHHhcC----CCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence 96 69999997532 22444556789999999999999999999999999999943 3468899999998653
Q ss_pred CCCCCCccccccccCccccCccccc---cCCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHHHHHHhhhcccccc
Q 047739 956 PTPAEASTSTTAVGTLGYVSPEAAL---TGETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKWVKKQLQKGQITEL 1031 (1099)
Q Consensus 956 ~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1099)
............+||+.|+|||++. ...++.++||||+||++|||++ |..||.......... ....... .
T Consensus 175 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~----~~~~~~~-~- 248 (432)
T 3p23_A 175 VGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI----LLGACSL-D- 248 (432)
T ss_dssp -----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHH----HTTCCCC-T-
T ss_pred CCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHH----HhccCCc-c-
Confidence 3222223345578999999999987 4567889999999999999999 999986543322111 1111100 0
Q ss_pred ccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1032 LEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1032 ~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
...+... .-..+.+++.+||+.||++|||+.||++
T Consensus 249 ------~~~~~~~---~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 249 ------CLHPEKH---EDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp ------TSCTTCH---HHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ------ccCcccc---ccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 0111111 1122457999999999999999999984
No 281
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=4e-33 Score=318.41 Aligned_cols=307 Identities=24% Similarity=0.372 Sum_probs=172.8
Q ss_pred ccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCC
Q 047739 314 LTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLK 393 (1099)
Q Consensus 314 ~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 393 (1099)
+..+++|++|++++|.++. ++ .+..+++|++|++++|++++..+ +..+++|++|+|++|++++ ++ .+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCS
T ss_pred chhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcCC
Confidence 3455667777777776653 33 35566666666666666653322 5566666666666666552 22 344444444
Q ss_pred eeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCc
Q 047739 394 SLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNA 473 (1099)
Q Consensus 394 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~ 473 (1099)
+|++++|.+++..+ + ..+++|+.|++++|.....+ ..+..+++|+.|++++|.
T Consensus 114 ~L~l~~n~i~~~~~--~------------------------~~l~~L~~L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~ 166 (347)
T 4fmz_A 114 ELYLNEDNISDISP--L------------------------ANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESK 166 (347)
T ss_dssp EEECTTSCCCCCGG--G------------------------TTCTTCCEEECTTCTTCCCC-GGGTTCTTCCEEECCSSC
T ss_pred EEECcCCcccCchh--h------------------------ccCCceeEEECCCCCCcccc-cchhhCCCCcEEEecCCC
Confidence 44444444443222 4 44444444444444332222 224444455555555554
Q ss_pred CCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhcccccceecccccccCCCCCCc
Q 047739 474 FSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPAT 553 (1099)
Q Consensus 474 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 553 (1099)
+.+..+ +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|.+++..+
T Consensus 167 ~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~-- 238 (347)
T 4fmz_A 167 VKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP-- 238 (347)
T ss_dssp CCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--
T ss_pred cCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--
Confidence 443222 4455555555555555543222 4555555556666555553322 5556666666666666654333
Q ss_pred ccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccCcccEEeccCccccccCCcccCCCCCCC
Q 047739 554 FSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSLR 633 (1099)
Q Consensus 554 l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 633 (1099)
+..+++|+.|++++|++++. +.+..+++|++|++++|++++ + ..+..+++|+.|++++|++++..|..++.+++|+
T Consensus 239 ~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 314 (347)
T 4fmz_A 239 LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISD-I-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLT 314 (347)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCS
T ss_pred hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCC-C-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCC
Confidence 55566666666666666532 346666777777777777764 3 3466777777777777777766666677777777
Q ss_pred EEECcCccccccCChhhhccCCCCeeecCCCcCC
Q 047739 634 SLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLS 667 (1099)
Q Consensus 634 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~ 667 (1099)
.|++++|++++..| +..+++|+.||+++|+++
T Consensus 315 ~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 315 TLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp EEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 77777777775444 667777777777777764
No 282
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.2e-34 Score=340.35 Aligned_cols=255 Identities=20% Similarity=0.256 Sum_probs=182.3
Q ss_pred ccccccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhc-cCCcceEEeeEEecCCCceEEEEeecC
Q 047739 804 QFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKV-RHRNLTVLRGYYAGAPDLRLLVYDYMP 882 (1099)
Q Consensus 804 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV~e~~~ 882 (1099)
.|...++||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+ +...|+||||+.
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~--~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~-~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIRYYCSETT-DRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG--GHHHHHHHHHHHHHHTTSTTBCCEEEEEEC-SSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH--HHHHHHHHHHHHHhccCCCCcCeEEEEEec-CCeEEEEEecCC
Confidence 45567889999999998877778999999998542 245678999999987 89999999999874 456799999995
Q ss_pred CCCHHHHHhhhccCCC--CCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCC-------------CcEEEec
Q 047739 883 NGNLGTLLQEASHQDG--HVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDAD-------------FEAHLSD 947 (1099)
Q Consensus 883 ~gsL~~~l~~~~~~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~-------------~~~kl~D 947 (1099)
|+|.+++........ ...++..++.++.||+.||+|||+.||+||||||+||+++.+ +.+||+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~D 171 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 171 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECC
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcc
Confidence 699999986432211 112344567899999999999999999999999999999654 4899999
Q ss_pred cccccccCCCCCC-CccccccccCccccCcccccc-------CCCCCcCchhhHHHHHHHHHh-CCCCCCCCCchhHHHH
Q 047739 948 FGLDRLTIPTPAE-ASTSTTAVGTLGYVSPEAALT-------GETTKESDVYSFGIVLLELLT-GKRPVMFTQDEDIVKW 1018 (1099)
Q Consensus 948 fGla~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DV~S~G~il~ellt-g~~P~~~~~~~~~~~~ 1018 (1099)
||+++........ ........||+.|+|||++.+ ..++.++||||+||++|||++ |+.||....... ..
T Consensus 172 FG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~ 249 (434)
T 2rio_A 172 FGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SN 249 (434)
T ss_dssp CTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH--HH
T ss_pred cccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH--HH
Confidence 9999865322111 112345689999999999875 568999999999999999999 999996543322 11
Q ss_pred HHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1019 VKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1019 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
+.. +... .+... .......-..+.+++.+||+.||++|||+.||++
T Consensus 250 i~~----~~~~---~~~~~----~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 250 IIR----GIFS---LDEMK----CLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHH----TCCC---CCCCT----TCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred Hhc----CCCC---ccccc----ccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 111 1100 00000 0011111234568999999999999999999985
No 283
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-34 Score=325.82 Aligned_cols=242 Identities=24% Similarity=0.332 Sum_probs=188.6
Q ss_pred HHHhccccccccccccceeEEEEEEC-CceEEEEEECCCCCc-------cHHHHHHHHHHhhhc----cCCcceEEeeEE
Q 047739 800 EATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL-------DENLFRKEAEFLGKV----RHRNLTVLRGYY 867 (1099)
Q Consensus 800 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-------~~~~~~~E~~~l~~l----~H~niv~l~~~~ 867 (1099)
...++|.+.+.||+|+||.||+|... +++.||+|.+..... ....+.+|+++++++ +||||+++++++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 34678999999999999999999874 688999999965432 224466899999999 899999999998
Q ss_pred ecCCCceEEEEee-cCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEEC-CCCcEEE
Q 047739 868 AGAPDLRLLVYDY-MPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFD-ADFEAHL 945 (1099)
Q Consensus 868 ~~~~~~~~lV~e~-~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~-~~~~~kl 945 (1099)
... +..++|||| +.+++|.+++... ..+++..+..++.|+++||+|||+.||+||||||+||+++ .++.+||
T Consensus 108 ~~~-~~~~~v~e~~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl 181 (312)
T 2iwi_A 108 ETQ-EGFMLVLERPLPAQDLFDYITEK-----GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKL 181 (312)
T ss_dssp ------CEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEE
T ss_pred ecC-CeEEEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEE
Confidence 754 445899999 7889999999863 2489999999999999999999999999999999999999 8899999
Q ss_pred eccccccccCCCCCCCccccccccCccccCccccccCCCC-CcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhh
Q 047739 946 SDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETT-KESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQ 1024 (1099)
Q Consensus 946 ~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~ 1024 (1099)
+|||+++.... .......||..|+|||++.+..+. .++||||+|+++|||++|+.||.... . +..
T Consensus 182 ~dfg~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~----~~~--- 247 (312)
T 2iwi_A 182 IDFGSGALLHD-----EPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ--E----ILE--- 247 (312)
T ss_dssp CCCSSCEECCS-----SCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--H----HHH---
T ss_pred EEcchhhhccc-----CcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH--H----Hhh---
Confidence 99999986522 123456799999999998877664 58999999999999999999996421 1 111
Q ss_pred hccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1025 KGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1025 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
... .+.. . .. ..+.+++.+||+.||++|||++|+++.
T Consensus 248 -~~~--~~~~-------~-~~----~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 248 -AEL--HFPA-------H-VS----PDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp -TCC--CCCT-------T-SC----HHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -hcc--CCcc-------c-CC----HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 100 0000 0 01 124578999999999999999999984
No 284
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=4e-33 Score=318.41 Aligned_cols=305 Identities=23% Similarity=0.333 Sum_probs=221.5
Q ss_pred CCCceeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEE
Q 047739 292 CSSVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLL 371 (1099)
Q Consensus 292 ~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 371 (1099)
.+++|++|++++|.+... + .+..+++|++|++++|.+++. +. |.++++|++|++++|.+++. ..+..+++|++|
T Consensus 42 ~l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L 115 (347)
T 4fmz_A 42 ELESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITDI--SALQNLTNLREL 115 (347)
T ss_dssp HHTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEE
T ss_pred hcccccEEEEeCCccccc-h-hhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEE
Confidence 457899999999999864 4 388999999999999999864 44 99999999999999999853 469999999999
Q ss_pred EccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCc
Q 047739 372 DLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFS 451 (1099)
Q Consensus 372 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 451 (1099)
+|++|++++ ++. +..+++|++|++++|......+ .+.++++|++|++++|.+.+..+ +..+++|+.|++++|.++
T Consensus 116 ~l~~n~i~~-~~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~ 190 (347)
T 4fmz_A 116 YLNEDNISD-ISP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIE 190 (347)
T ss_dssp ECTTSCCCC-CGG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCC
T ss_pred ECcCCcccC-chh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccc
Confidence 999999985 444 8899999999999996654443 38888889999999888875433 777888888888888887
Q ss_pred cccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhh
Q 047739 452 GEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFS 531 (1099)
Q Consensus 452 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 531 (1099)
+..+ +..+++|+.|++++|.+.+..+ +..+++|++|++++|++++..+ +..+++|+.|++++|.+++.
T Consensus 191 ~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~------ 258 (347)
T 4fmz_A 191 DISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI------ 258 (347)
T ss_dssp CCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC------
T ss_pred cccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC------
Confidence 4433 6667777777777777764433 5566666666666666653322 44555555555555555432
Q ss_pred cccccceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccCcccEE
Q 047739 532 SLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVL 611 (1099)
Q Consensus 532 ~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 611 (1099)
..+..+++|+.|++++|++++. +.+..+++|++|++++|++++..|..++.+++|+.|
T Consensus 259 --------------------~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 316 (347)
T 4fmz_A 259 --------------------NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTL 316 (347)
T ss_dssp --------------------GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEE
T ss_pred --------------------hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEE
Confidence 2344445555555555555532 346667777778888887777667777778888888
Q ss_pred eccCccccccCCcccCCCCCCCEEECcCcccc
Q 047739 612 DLSINNLTGEIPDEISKCSSLRSLLVNSNHLS 643 (1099)
Q Consensus 612 ~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 643 (1099)
++++|++++..| +..+++|++|++++|+++
T Consensus 317 ~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 317 FLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp ECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EccCCccccccC--hhhhhccceeehhhhccc
Confidence 888888775444 677788888888888765
No 285
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.2e-34 Score=326.86 Aligned_cols=241 Identities=23% Similarity=0.348 Sum_probs=193.9
Q ss_pred HHhccccccccccccceeEEEEEEC-CceEEEEEECCCCCc-------cHHHHHHHHHHhhhcc--CCcceEEeeEEecC
Q 047739 801 ATRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSL-------DENLFRKEAEFLGKVR--HRNLTVLRGYYAGA 870 (1099)
Q Consensus 801 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-------~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~ 870 (1099)
..++|.+.+.||+|+||.||+|... +++.||+|.+..... ..+.+.+|++++++++ ||||+++++++..
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~- 119 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER- 119 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC-
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec-
Confidence 4568999999999999999999874 689999999854322 2255778999999996 5999999999985
Q ss_pred CCceEEEEeecCC-CCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEEC-CCCcEEEecc
Q 047739 871 PDLRLLVYDYMPN-GNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFD-ADFEAHLSDF 948 (1099)
Q Consensus 871 ~~~~~lV~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~-~~~~~kl~Df 948 (1099)
+...++||||+.+ ++|.+++... ..+++..+..++.|+++||+|||+.+|+||||||+||+++ .++.+||+||
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITER-----GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCC
T ss_pred CCcEEEEEEcCCCCccHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 4556999999986 8999999753 3488999999999999999999999999999999999999 7899999999
Q ss_pred ccccccCCCCCCCccccccccCccccCccccccCCC-CCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhcc
Q 047739 949 GLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGET-TKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQ 1027 (1099)
Q Consensus 949 Gla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 1027 (1099)
|+++.... .......||..|+|||++.+..+ +.++||||||+++|||++|+.||.... . +. ...
T Consensus 195 g~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--~----~~----~~~ 259 (320)
T 3a99_A 195 GSGALLKD-----TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--E----II----RGQ 259 (320)
T ss_dssp TTCEECCS-----SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--H----HH----HCC
T ss_pred cccccccc-----ccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh--h----hh----ccc
Confidence 99986521 22334579999999999887765 688899999999999999999996421 1 11 111
Q ss_pred ccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 047739 1028 ITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFM 1076 (1099)
Q Consensus 1028 ~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1076 (1099)
. .....+ + ..+.+++.+||+.||++|||++|+++.
T Consensus 260 ~--~~~~~~--------~----~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 260 V--FFRQRV--------S----SECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp C--CCSSCC--------C----HHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred c--cccccC--------C----HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 011110 1 124578999999999999999999873
No 286
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.9e-33 Score=316.99 Aligned_cols=249 Identities=18% Similarity=0.267 Sum_probs=175.4
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCCccH---HHHHHHHHHhhhccCCcceEEeeEEecCCCceEEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDE---NLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLV 877 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~---~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 877 (1099)
.++|+..+.||+|+||.||+|.+. +|+.||+|.+....... +.+.++..+++.++||||+++++++... ...++|
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~-~~~~lv 102 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITN-TDVFIA 102 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-SEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecC-CcEEEE
Confidence 467999999999999999999986 68999999986543322 3344555678888999999999999854 566999
Q ss_pred EeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccC-CceecCCCCCCEEECCCCcEEEeccccccccCC
Q 047739 878 YDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTS-NMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIP 956 (1099)
Q Consensus 878 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 956 (1099)
|||+ ++.+..+.... ...+++..+..++.|+++||+|||+. ||+||||||+||+++.++.+||+|||+++....
T Consensus 103 ~e~~-~~~~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 103 MELM-GTCAEKLKKRM----QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp ECCC-SEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred Eecc-CCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence 9999 45555555432 23489999999999999999999995 999999999999999999999999999975422
Q ss_pred CCCCCccccccccCccccCccccc-----cCCCCCcCchhhHHHHHHHHHhCCCCCCCCCc-hhHHHHHHHHhhhccccc
Q 047739 957 TPAEASTSTTAVGTLGYVSPEAAL-----TGETTKESDVYSFGIVLLELLTGKRPVMFTQD-EDIVKWVKKQLQKGQITE 1030 (1099)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~S~G~il~elltg~~P~~~~~~-~~~~~~~~~~~~~~~~~~ 1030 (1099)
........||..|+|||++. ...++.++||||||+++|||++|+.||..... .+....+.. +....
T Consensus 178 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~----~~~~~ 249 (318)
T 2dyl_A 178 ----DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ----EEPPL 249 (318)
T ss_dssp -------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHH----SCCCC
T ss_pred ----CccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhc----cCCCC
Confidence 12233457999999999984 45688999999999999999999999976332 222222221 11110
Q ss_pred cccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 047739 1031 LLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVF 1075 (1099)
Q Consensus 1031 ~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1075 (1099)
. .. . ...+ ..+.+++.+||+.||.+||++.|+++
T Consensus 250 ~-~~-~-----~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 250 L-PG-H-----MGFS----GDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp C-CS-S-----SCCC----HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred C-Cc-c-----CCCC----HHHHHHHHHHccCChhHCcCHHHHhh
Confidence 0 00 0 0001 12457899999999999999999976
No 287
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=5.2e-34 Score=315.42 Aligned_cols=234 Identities=12% Similarity=0.047 Sum_probs=179.3
Q ss_pred hccccccccccccceeEEEEEECC-ceEEEEEECCCCCcc----HHHHHHHHHHhhhccCCcceEEeeEEecCCCceEEE
Q 047739 803 RQFDEENVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLD----ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLLV 877 (1099)
Q Consensus 803 ~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 877 (1099)
++|.+.+.||+|+||.||+|.+.. |+.||+|.+...... .+.+.+|++++++++||||+++++++... +..|+|
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~-~~~~lv 109 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTR-AGGLVV 109 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET-TEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEEC-CcEEEE
Confidence 579999999999999999999864 899999999764332 26789999999999999999999999854 556999
Q ss_pred EeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCCC
Q 047739 878 YDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPT 957 (1099)
Q Consensus 878 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 957 (1099)
|||+++++|.++++.. ....+..+++.|+++||+|||+.||+||||||+||+++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~-------- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS-------PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA-------- 174 (286)
T ss_dssp EECCCEEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCC--------
T ss_pred EEecCCCCHHHHHhcC-------CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecc--------
Confidence 9999999999999631 3555788899999999999999999999999999999999999998554
Q ss_pred CCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCccc
Q 047739 958 PAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLL 1037 (1099)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1037 (1099)
|++ .++.++|||||||++|||++|+.||.............+.. .+... ...
T Consensus 175 ---------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~-~~~~~-----~~~ 226 (286)
T 3uqc_A 175 ---------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDT-AGQPI-----EPA 226 (286)
T ss_dssp ---------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCT-TSCBC-----CHH
T ss_pred ---------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHh-ccCCC-----Chh
Confidence 233 26889999999999999999999997654322100000000 00000 000
Q ss_pred CCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhhcccCCCCC
Q 047739 1038 ELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIVFMLEGCRVGPDI 1086 (1099)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~ 1086 (1099)
...+.. + ..+.+++.+||+.||++| |+.|+++.|+++....+.
T Consensus 227 ~~~~~~-~----~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~~ 269 (286)
T 3uqc_A 227 DIDRDI-P----FQISAVAARSVQGDGGIR-SASTLLNLMQQATAVADR 269 (286)
T ss_dssp HHCTTS-C----HHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC----
T ss_pred hcccCC-C----HHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCCc
Confidence 000000 0 124689999999999999 999999999998766553
No 288
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=5.2e-34 Score=342.90 Aligned_cols=263 Identities=21% Similarity=0.290 Sum_probs=191.9
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCC--ccHHHHHHHHHHhhhccCCcceEEeeEEec-----CCCc
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS--LDENLFRKEAEFLGKVRHRNLTVLRGYYAG-----APDL 873 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-----~~~~ 873 (1099)
..+|++.++||+|+||.||+|.+. +|..||+|++.... ...+.+.+|++++++++||||+++++++.. ....
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 367999999999999999999875 58999999986532 234678999999999999999999998764 2445
Q ss_pred eEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCc---EEEecccc
Q 047739 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFE---AHLSDFGL 950 (1099)
Q Consensus 874 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~---~kl~DfGl 950 (1099)
.++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+.||+||||||+||+++.++. +||+|||+
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~--~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFE--NCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSS--CTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred EEEEEEeCCCCCHHHHHHhcc--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccc
Confidence 689999999999999998532 2345889999999999999999999999999999999999987664 99999999
Q ss_pred ccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhc----
Q 047739 951 DRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKG---- 1026 (1099)
Q Consensus 951 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~---- 1026 (1099)
++.... ........||..|+|||.+.+..++.++||||+|+++|||++|+.||...... ..|........
T Consensus 171 a~~~~~----~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~--~~~~~~i~~~~~~~~ 244 (676)
T 3qa8_A 171 AKELDQ----GELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP--VQWHGKVREKSNEHI 244 (676)
T ss_dssp CCBTTS----CCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH--HHSSTTCC------C
T ss_pred cccccc----ccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch--hhhhhhhhcccchhh
Confidence 986522 22234568999999999999999999999999999999999999999754322 11111000000
Q ss_pred cccccccCc--ccCC--CCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHH
Q 047739 1027 QITELLEPG--LLEL--DPESSEWEEFLLGVKVALLCTAPDPIDRPTMSD 1072 (1099)
Q Consensus 1027 ~~~~~~d~~--~~~~--~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~e 1072 (1099)
...+..... +... .+.......-..+.+++.+||+.||++|||++|
T Consensus 245 ~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~e 294 (676)
T 3qa8_A 245 VVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQ 294 (676)
T ss_dssp CSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTT
T ss_pred hhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHH
Confidence 000000000 0000 000011111223468999999999999999976
No 289
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.7e-33 Score=315.69 Aligned_cols=256 Identities=29% Similarity=0.481 Sum_probs=182.4
Q ss_pred CCCEEEccCCcCcc--ccCcccCCCCcccEEEccC-CcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCcccee
Q 047739 439 NLSTLDLSENKFSG--EVPASIGNLSQLMVFNLSG-NAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVI 515 (1099)
Q Consensus 439 ~L~~L~Ls~N~l~~--~~~~~l~~l~~L~~L~L~~-N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 515 (1099)
+++.|+|++|.+++ .+|..++++++|++|+|++ |.+.+.+|..|+++++|++|++++|++++.+|..+..+++|++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 130 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEE
Confidence 34445555555544 4455555555555555553 55555555555556666666666666665666666666666666
Q ss_pred eeccccccCCCchhhhcccccceecccccccCCCCCCcccccc-eeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcc
Q 047739 516 ALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATFSFLR-SVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSL 594 (1099)
Q Consensus 516 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~-~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l 594 (1099)
+|++|.+++.+|..|..+++|++|++++|++++.+|..+..++ +|+.|++++|++++.+|..++.++ |++|+|++|++
T Consensus 131 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l 209 (313)
T 1ogq_A 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNML 209 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEE
T ss_pred eCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcc
Confidence 6666666666666666667777777777777666666666666 677777777777777777777776 88888888888
Q ss_pred cCcCCcchhccCcccEEeccCccccccCCcccCCCCCCCEEECcCccccccCChhhhccCCCCeeecCCCcCCCcCCCCc
Q 047739 595 TGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLSGEIPANL 674 (1099)
Q Consensus 595 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~ 674 (1099)
++.+|..+..+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|..+..+++|+.|++++|+++|.+|..
T Consensus 210 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~- 287 (313)
T 1ogq_A 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG- 287 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-
T ss_pred cCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-
Confidence 877888888888888888888888866555 778888899999999888888888888889999999999998888876
Q ss_pred cccccccccccCCCCcccCCCCccCCCCCCC
Q 047739 675 SSIFGLMNFNVSSNNLQAFANNQDLCGKPLG 705 (1099)
Q Consensus 675 ~~~~~l~~l~l~~n~~~~~~~n~~l~~~~~~ 705 (1099)
..+.+|+.++++ +|+.+||.|+.
T Consensus 288 ~~l~~L~~l~l~--------~N~~lc~~p~~ 310 (313)
T 1ogq_A 288 GNLQRFDVSAYA--------NNKCLCGSPLP 310 (313)
T ss_dssp TTGGGSCGGGTC--------SSSEEESTTSS
T ss_pred ccccccChHHhc--------CCCCccCCCCC
Confidence 677777777744 45567887765
No 290
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=9e-33 Score=343.26 Aligned_cols=239 Identities=19% Similarity=0.285 Sum_probs=188.6
Q ss_pred HhccccccccccccceeEEEEEEC--CceEEEEEECCCCC--ccHHHHHHHHHHhhhccCCcceEEeeEEecCCCc----
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN--DGMVLSIRRLPDGS--LDENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDL---- 873 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~--~g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~---- 873 (1099)
.++|.+.++||+|+||.||+|.+. +|+.||+|.+.... ...+.+.+|++++++++||||+++++++......
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 368999999999999999999986 58999999986432 2235688999999999999999999999854432
Q ss_pred eEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccc
Q 047739 874 RLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRL 953 (1099)
Q Consensus 874 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~ 953 (1099)
.|+||||+++++|.+++.. .+++..++.++.||++||+|||+.||+||||||+||+++.+ .+||+|||+++.
T Consensus 159 ~~lv~E~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~ 230 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSR 230 (681)
T ss_dssp EEEEEECCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred eEEEEEeCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchh
Confidence 5999999999999887753 48999999999999999999999999999999999999986 999999999986
Q ss_pred cCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhcccccccc
Q 047739 954 TIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLE 1033 (1099)
Q Consensus 954 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 1033 (1099)
... .....||+.|+|||++.+. ++.++|||||||++|||++|..||...... .+
T Consensus 231 ~~~-------~~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~-------------~~----- 284 (681)
T 2pzi_A 231 INS-------FGYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVD-------------GL----- 284 (681)
T ss_dssp TTC-------CSCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECS-------------SC-----
T ss_pred ccc-------CCccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccc-------------cc-----
Confidence 521 1446799999999998765 488999999999999999999887531110 00
Q ss_pred CcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCC-HHHHHHHhhcc
Q 047739 1034 PGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPT-MSDIVFMLEGC 1080 (1099)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs-~~evl~~L~~~ 1080 (1099)
............+.+++.+||+.||++||+ ++++.+.+..+
T Consensus 285 ------~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 285 ------PEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp ------CTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ------cccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 001111111123568999999999999995 56666665543
No 291
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.1e-31 Score=304.17 Aligned_cols=288 Identities=19% Similarity=0.272 Sum_probs=165.2
Q ss_pred CCCEEEccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEcc
Q 047739 367 SLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLS 446 (1099)
Q Consensus 367 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 446 (1099)
+++.+++++|.++ .+|..+. ++|+.|++++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 4555555555555 4444332 455555555555555555555666666666666666665555556666666666666
Q ss_pred CCcCccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCc--ccCCcccCCCCccceeeeccccccC
Q 047739 447 ENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFS--GELPIELAGLPNLQVIALQENKLSG 524 (1099)
Q Consensus 447 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~--~~~~~~l~~l~~L~~L~L~~N~l~~ 524 (1099)
+|+++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.++ +..+..+..+ +|+.|++++|++++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 66665 3333332 45666666666665444445566666666666666654 2444555555 56666666666653
Q ss_pred CCchhhhcccccceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhc
Q 047739 525 NVPEGFSSLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISH 604 (1099)
Q Consensus 525 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 604 (1099)
+|..+. ++|++|++++|.+++..+..+..+++|+.|++++|++++..+..++.+++|++|+|++|+++ .+|..+..
T Consensus 187 -l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 262 (332)
T 2ft3_A 187 -IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPD 262 (332)
T ss_dssp -CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGG
T ss_pred -cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhc
Confidence 333332 45666666666666555556666666666666666666555556666666666666666666 56666666
Q ss_pred cCcccEEeccCccccccCCcccCC------CCCCCEEECcCcccc--ccCChhhhccCCCCeeecCCCc
Q 047739 605 LSHLNVLDLSINNLTGEIPDEISK------CSSLRSLLVNSNHLS--GGIPDSLAKLSNLAVLDLSANN 665 (1099)
Q Consensus 605 l~~L~~L~Ls~N~l~~~~p~~l~~------l~~L~~L~Ls~N~l~--~~~p~~l~~l~~L~~L~ls~N~ 665 (1099)
+++|+.|++++|++++..+..+.. ..+|+.|++++|++. +..|..+..+++|+.+++++|+
T Consensus 263 l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 263 LKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 666666666666666444444433 245666666666665 4455666666666666666653
No 292
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.98 E-value=1.9e-31 Score=302.29 Aligned_cols=267 Identities=23% Similarity=0.315 Sum_probs=165.1
Q ss_pred CCCEEEccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEcc
Q 047739 367 SLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLS 446 (1099)
Q Consensus 367 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 446 (1099)
+|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|+++ .+|..+. ++|++|+++
T Consensus 55 ~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~ 131 (332)
T 2ft3_A 55 DTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIH 131 (332)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECC
T ss_pred CCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECC
Confidence 4444444444444443444444444555555555544444555555555555555555555 3333332 455555555
Q ss_pred CCcCccccCcccCCCCcccEEEccCCcCC--CcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccC
Q 047739 447 ENKFSGEVPASIGNLSQLMVFNLSGNAFS--GRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSG 524 (1099)
Q Consensus 447 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~--~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 524 (1099)
+|++++..+..|.++++|+.|++++|.++ +..+..+..+ +|++|++++|++++ +|..+. ++|+.|++++|++++
T Consensus 132 ~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~ 207 (332)
T 2ft3_A 132 DNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQA 207 (332)
T ss_dssp SSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCC
T ss_pred CCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCc
Confidence 55555444445555566666666666554 2445555555 66666666666663 343333 567777777777776
Q ss_pred CCchhhhcccccceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhc
Q 047739 525 NVPEGFSSLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISH 604 (1099)
Q Consensus 525 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 604 (1099)
..+..|..+++|++|++++|.+++..+..+..+++|+.|++++|+++ .+|..++.+++|++|++++|++++..+..+..
T Consensus 208 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~ 286 (332)
T 2ft3_A 208 IELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCP 286 (332)
T ss_dssp CCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSC
T ss_pred cCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccc
Confidence 66667777777777777777777666667777777777777777777 67777777788888888888887555555543
Q ss_pred ------cCcccEEeccCcccc--ccCCcccCCCCCCCEEECcCcc
Q 047739 605 ------LSHLNVLDLSINNLT--GEIPDEISKCSSLRSLLVNSNH 641 (1099)
Q Consensus 605 ------l~~L~~L~Ls~N~l~--~~~p~~l~~l~~L~~L~Ls~N~ 641 (1099)
..+|+.|++++|.+. +..|..+..+++|+.|++++|+
T Consensus 287 ~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 287 VGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 356888888888876 5566778888888888888875
No 293
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.98 E-value=3.2e-31 Score=300.29 Aligned_cols=290 Identities=21% Similarity=0.261 Sum_probs=165.4
Q ss_pred CceeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEc
Q 047739 294 SVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDL 373 (1099)
Q Consensus 294 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 373 (1099)
..++.++++++.++. +|..+. ++|++|+|++|.|++..+..|+++++|++|+|++|.+++..|..|..+++|++|+|
T Consensus 31 c~l~~l~~~~~~l~~-lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLEK-VPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCCS-CCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCccc-cCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 356677777777764 343332 46777777777777666666777777777777777777666777777777777777
Q ss_pred cCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCcc--ccchhhhCCCCCCEEEccCCcCc
Q 047739 374 EGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSG--SLPEEVLGMNNLSTLDLSENKFS 451 (1099)
Q Consensus 374 s~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~ 451 (1099)
++|+++ .+|..+. ++|++|++++|.+++..+..|.++++|++|++++|.++. ..+..+.++++|++|++++|.++
T Consensus 108 s~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 184 (330)
T ss_dssp CSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred CCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc
Confidence 777776 4444333 455555555555555555555555555555555555532 34444555555555555555554
Q ss_pred cccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhh
Q 047739 452 GEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFS 531 (1099)
Q Consensus 452 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 531 (1099)
. +|..+. ++ |++|++++|++++..+..+..+++|+.|++++|.+++..+..|.
T Consensus 185 ~-l~~~~~--~~------------------------L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 237 (330)
T 1xku_A 185 T-IPQGLP--PS------------------------LTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLA 237 (330)
T ss_dssp S-CCSSCC--TT------------------------CSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGG
T ss_pred c-CCcccc--cc------------------------CCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhcc
Confidence 2 222222 34 44444444444444444444444455555555554444444455
Q ss_pred cccccceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCC------CCCCceEEecCCcccC--cCCcchh
Q 047739 532 SLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGN------CSDLEVLELRSNSLTG--HIPTDIS 603 (1099)
Q Consensus 532 ~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~------l~~L~~L~L~~N~l~~--~~p~~~~ 603 (1099)
.+++|++|++++|+++ .+|..+..+++|+.|++++|++++..+..|+. ...|+.|++++|.+.. ..|..+.
T Consensus 238 ~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~ 316 (330)
T 1xku_A 238 NTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFR 316 (330)
T ss_dssp GSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGT
T ss_pred CCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccc
Confidence 5555555555555554 44444555555555555555555444444432 3567778888887752 4456777
Q ss_pred ccCcccEEeccCcc
Q 047739 604 HLSHLNVLDLSINN 617 (1099)
Q Consensus 604 ~l~~L~~L~Ls~N~ 617 (1099)
.+.+|+.++|++|+
T Consensus 317 ~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 317 CVYVRAAVQLGNYK 330 (330)
T ss_dssp TCCCGGGEEC----
T ss_pred cccceeEEEecccC
Confidence 78888888888774
No 294
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.98 E-value=1.5e-35 Score=352.72 Aligned_cols=356 Identities=20% Similarity=0.184 Sum_probs=218.3
Q ss_pred CceeEEEcCCCccccCcch-hccCCCCccEEeCCCCcccc----CchhhhCCCCCCCEEEccCCccCccCCcccc-CCC-
Q 047739 294 SVLQVLDLQQNQIRGAFPL-WLTRASTLTRLDVSGNSISG----KIPAQIGGLWRLEELKMANNSFGGAVPVEIK-QCS- 366 (1099)
Q Consensus 294 ~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~Ls~N~i~~----~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~-~l~- 366 (1099)
+.|++|||++|+++..... .+..+++|++|+|++|.+++ .++..+..+++|++|+|++|.+++..+..+. .+.
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 4677888888887754333 36777888888888888874 3466677778888888888887754333332 234
Q ss_pred ---CCCEEEccCCcCCC----CCCccccCCCCCCeeeccCccccccCCcc-----CCCCCCCCEEEcccCcCcccc----
Q 047739 367 ---SLSLLDLEGNRFSG----EIPEFLGDIRGLKSLTLAANLFSGSIPAS-----FRNLPGLENLNLRHNSLSGSL---- 430 (1099)
Q Consensus 367 ---~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~~~~~-----~~~l~~L~~L~L~~N~l~~~~---- 430 (1099)
+|++|+|++|+++. .++..+..+++|++|+|++|.+++..+.. +...++|++|+|++|++++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 68888888888874 44777778888888888888876443332 233567888888888887643
Q ss_pred chhhhCCCCCCEEEccCCcCccccCcccC-----CCCcccEEEccCCcCCCc----CCCCCCCCCCCCEEEeccCcCccc
Q 047739 431 PEEVLGMNNLSTLDLSENKFSGEVPASIG-----NLSQLMVFNLSGNAFSGR----IPASLGNLLKLTTLDLSKQNFSGE 501 (1099)
Q Consensus 431 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~-----~l~~L~~L~L~~N~l~~~----~~~~l~~l~~L~~L~L~~n~l~~~ 501 (1099)
+..+..+++|++|++++|.++...+..+. ..++|+.|++++|.+++. ++..+..+++|++|++++|.+++.
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 242 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 242 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChH
Confidence 55566678888888888888755444443 255788888888877753 355566677788888888877643
Q ss_pred C-----CcccCCCCccceeeeccccccCC----CchhhhcccccceecccccccCCCCCCcccccceeeEEEccCCcCCC
Q 047739 502 L-----PIELAGLPNLQVIALQENKLSGN----VPEGFSSLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISG 572 (1099)
Q Consensus 502 ~-----~~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~ 572 (1099)
. +..+..+++|+.|++++|.+++. ++..+..+++|++|++++|.+.+..+..+...
T Consensus 243 ~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~--------------- 307 (461)
T 1z7x_W 243 GMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCET--------------- 307 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHH---------------
T ss_pred HHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHH---------------
Confidence 2 22233567777777777777643 45556667777777777777654433333221
Q ss_pred CCCCCCCCCCCCceEEecCCcccCc----CCcchhccCcccEEeccCccccccCCcccCC-----CCCCCEEECcCcccc
Q 047739 573 SIPPELGNCSDLEVLELRSNSLTGH----IPTDISHLSHLNVLDLSINNLTGEIPDEISK-----CSSLRSLLVNSNHLS 643 (1099)
Q Consensus 573 ~~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~-----l~~L~~L~Ls~N~l~ 643 (1099)
.....++|++|+|++|.+++. ++..+..+++|+.|+|++|++++..+..+.. .++|++|+|++|+++
T Consensus 308 ----l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~ 383 (461)
T 1z7x_W 308 ----LLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVS 383 (461)
T ss_dssp ----HTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred ----hccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCC
Confidence 000113444444444444432 2333444455555555555554332222221 345555555555554
Q ss_pred c----cCChhhhccCCCCeeecCCCcCCC
Q 047739 644 G----GIPDSLAKLSNLAVLDLSANNLSG 668 (1099)
Q Consensus 644 ~----~~p~~l~~l~~L~~L~ls~N~l~~ 668 (1099)
+ .+|..+..+++|+.||+++|++++
T Consensus 384 ~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 384 DSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp HHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred hhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 3 444555555555555555555543
No 295
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.97 E-value=3.4e-32 Score=303.70 Aligned_cols=238 Identities=19% Similarity=0.304 Sum_probs=177.9
Q ss_pred Hhccccc-cccccccceeEEEEEEC-CceEEEEEECCCCCccHHHHHHHHHHh-hhccCCcceEEeeEEec---CCCceE
Q 047739 802 TRQFDEE-NVLSRTRYGLVFKACYN-DGMVLSIRRLPDGSLDENLFRKEAEFL-GKVRHRNLTVLRGYYAG---APDLRL 875 (1099)
Q Consensus 802 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~---~~~~~~ 875 (1099)
.++|.+. ++||+|+||.||+|... +++.||+|.+.. ...+.+|++++ +..+||||+++++++.. .....+
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 3567776 78999999999999984 688999999853 35678899988 55689999999999864 244568
Q ss_pred EEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECC---CCcEEEecccccc
Q 047739 876 LVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDA---DFEAHLSDFGLDR 952 (1099)
Q Consensus 876 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~---~~~~kl~DfGla~ 952 (1099)
+||||+++|+|.+++... ....+++..+..++.|++.||+|||+.+|+||||||+||+++. ++.+||+|||+++
T Consensus 92 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 168 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDR---GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168 (299)
T ss_dssp EEECCCCSCBHHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecccccc
Confidence 999999999999999863 2345899999999999999999999999999999999999998 7889999999986
Q ss_pred ccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCCCCCchhHHHHHHHHhhhccccccc
Q 047739 953 LTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELL 1032 (1099)
Q Consensus 953 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1099)
... +..++.++||||+||++|||++|+.||............ ....
T Consensus 169 ~~~-------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~---------~~~~ 214 (299)
T 3m2w_A 169 ETT-------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM---------KTRI 214 (299)
T ss_dssp ECT-------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCS---------CCSS
T ss_pred ccc-------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHH---------HHHH
Confidence 431 134678999999999999999999999754332211000 0000
Q ss_pred cCcccCCCCCChhHH-HHHHHHHHHHhcCCCCCCCCCCHHHHHH--HhhcccC
Q 047739 1033 EPGLLELDPESSEWE-EFLLGVKVALLCTAPDPIDRPTMSDIVF--MLEGCRV 1082 (1099)
Q Consensus 1033 d~~~~~~~~~~~~~~-~~~~~~~li~~Cl~~dP~~RPs~~evl~--~L~~~~~ 1082 (1099)
....... ....+. .-..+.+++.+||+.||++|||+.|+++ .+.+...
T Consensus 215 ~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~ 265 (299)
T 3m2w_A 215 RMGQYEF--PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 265 (299)
T ss_dssp CTTCCSS--CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGG
T ss_pred hhccccC--CchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhccccc
Confidence 0000000 000000 0123467999999999999999999997 4444433
No 296
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=1.2e-30 Score=295.57 Aligned_cols=289 Identities=20% Similarity=0.272 Sum_probs=202.4
Q ss_pred CccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeecc
Q 047739 319 TLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLA 398 (1099)
Q Consensus 319 ~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 398 (1099)
+++.++++++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|+.+++|++|+++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 5677777777766 3444332 356666666666665555555666666666666666655545555555555555555
Q ss_pred CccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCCC--
Q 047739 399 ANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSG-- 476 (1099)
Q Consensus 399 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~-- 476 (1099)
+|+++. +|..+. ++|++|++++|.+++..+..+.++++|+.|++++|.++.
T Consensus 109 ~n~l~~-------------------------l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 161 (330)
T 1xku_A 109 KNQLKE-------------------------LPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSG 161 (330)
T ss_dssp SSCCSB-------------------------CCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGG
T ss_pred CCcCCc-------------------------cChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccC
Confidence 555542 232222 344555555555544444444555555555555555532
Q ss_pred cCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhcccccceecccccccCCCCCCcccc
Q 047739 477 RIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATFSF 556 (1099)
Q Consensus 477 ~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~ 556 (1099)
..+..+.++++|++|++++|.++ .+|..+. ++|+.|++++|++++..+..|..+++|++|++++|.+++..+..+..
T Consensus 162 ~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 238 (330)
T 1xku_A 162 IENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLAN 238 (330)
T ss_dssp BCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGG
T ss_pred cChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccC
Confidence 44556666777777777777776 3444443 78999999999999888999999999999999999999888889999
Q ss_pred cceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhc------cCcccEEeccCccccc--cCCcccCC
Q 047739 557 LRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISH------LSHLNVLDLSINNLTG--EIPDEISK 628 (1099)
Q Consensus 557 l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~------l~~L~~L~Ls~N~l~~--~~p~~l~~ 628 (1099)
+++|+.|++++|+++ .+|..+..+++|++|+|++|++++..+..+.. ...|+.|++++|.+.. ..|..+..
T Consensus 239 l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~ 317 (330)
T 1xku_A 239 TPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRC 317 (330)
T ss_dssp STTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTT
T ss_pred CCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCcccccc
Confidence 999999999999999 78999999999999999999999766666643 4789999999999863 55678899
Q ss_pred CCCCCEEECcCcc
Q 047739 629 CSSLRSLLVNSNH 641 (1099)
Q Consensus 629 l~~L~~L~Ls~N~ 641 (1099)
+.+++.++|++|+
T Consensus 318 ~~~l~~l~L~~N~ 330 (330)
T 1xku_A 318 VYVRAAVQLGNYK 330 (330)
T ss_dssp CCCGGGEEC----
T ss_pred ccceeEEEecccC
Confidence 9999999999995
No 297
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.97 E-value=2e-32 Score=319.23 Aligned_cols=243 Identities=16% Similarity=0.118 Sum_probs=177.9
Q ss_pred HhccccccccccccceeEEEEEEC-CceEEEEEECCCCC----ccHHHHHHHHHHhhhccC-Ccce--------------
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS----LDENLFRKEAEFLGKVRH-RNLT-------------- 861 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H-~niv-------------- 861 (1099)
.++|...++||+|+||.||+|.+. +|+.||||++.... ...+.+.+|+.+++.++| +|..
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 346788899999999999999965 68999999986322 224679999999999987 3211
Q ss_pred -E------EeeEEecC----CCceEEEEeecCCCCHHHHHhhhc--cCCCCCCCHHHHHHHHHHHHHHHHHHccCCceec
Q 047739 862 -V------LRGYYAGA----PDLRLLVYDYMPNGNLGTLLQEAS--HQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHG 928 (1099)
Q Consensus 862 -~------l~~~~~~~----~~~~~lV~e~~~~gsL~~~l~~~~--~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~ 928 (1099)
. +..++... ....+++|+++ +++|.++++... ......+++..+..++.|+++||+|||+.+|+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHr 235 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT 235 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 1 11111111 12246777766 689999986432 1223457888999999999999999999999999
Q ss_pred CCCCCCEEECCCCcEEEeccccccccCCCCCCCccccccccCccccCcccc----------ccCCCCCcCchhhHHHHHH
Q 047739 929 DIKPQNVLFDADFEAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAA----------LTGETTKESDVYSFGIVLL 998 (1099)
Q Consensus 929 Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DV~S~G~il~ 998 (1099)
||||+|||++.++.+||+|||+++... ......+| +.|+|||++ .+..++.++|||||||++|
T Consensus 236 DiKp~NILl~~~~~~kL~DFG~a~~~~------~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 236 YLRPVDIVLDQRGGVFLTGFEHLVRDG------ASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETT------EEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred CcccceEEEecCCeEEEEeccceeecC------CccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 999999999999999999999987542 12345577 999999998 5556888999999999999
Q ss_pred HHHhCCCCCCCCCchhHHHHHHHHhhhccccccccCcccCCCCCChhHHHHHHHHHHHHhcCCCCCCCCCCHHHHH
Q 047739 999 ELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVALLCTAPDPIDRPTMSDIV 1074 (1099)
Q Consensus 999 elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl 1074 (1099)
||++|+.||.......... ..+. ..... + ..+.+++.+||+.||++||++.|++
T Consensus 309 elltg~~Pf~~~~~~~~~~------------~~~~-~~~~~-----~----~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 309 WIWCADLPNTDDAALGGSE------------WIFR-SCKNI-----P----QPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp HHHHSSCCCCTTGGGSCSG------------GGGS-SCCCC-----C----HHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred HHHHCCCCCCCcchhhhHH------------HHHh-hcccC-----C----HHHHHHHHHHccCChhhCcCHHHHH
Confidence 9999999997544322111 0111 00011 1 2346789999999999999976653
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=3e-35 Score=350.08 Aligned_cols=355 Identities=19% Similarity=0.196 Sum_probs=245.3
Q ss_pred CCccEEeCCCCccccCchhh-hCCCCCCCEEEccCCccCcc----CCccccCCCCCCEEEccCCcCCCCCCccc-cCCC-
Q 047739 318 STLTRLDVSGNSISGKIPAQ-IGGLWRLEELKMANNSFGGA----VPVEIKQCSSLSLLDLEGNRFSGEIPEFL-GDIR- 390 (1099)
Q Consensus 318 ~~L~~L~Ls~N~i~~~~p~~-~~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~- 390 (1099)
++|++|||++|+++...... +..+++|++|+|++|.+++. ++..+..+++|++|+|++|++++..+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 46899999999997544333 77888999999999998753 46667788899999999998875444333 2343
Q ss_pred ---CCCeeeccCccccc----cCCccCCCCCCCCEEEcccCcCccccchhhhC-----CCCCCEEEccCCcCccccCccc
Q 047739 391 ---GLKSLTLAANLFSG----SIPASFRNLPGLENLNLRHNSLSGSLPEEVLG-----MNNLSTLDLSENKFSGEVPASI 458 (1099)
Q Consensus 391 ---~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~Ls~N~l~~~~~~~l 458 (1099)
+|++|+|++|.++. .++..+.++++|++|+|++|.+++..+..+.. .++|++|+|++|.+++....
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~-- 160 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCE-- 160 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH--
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHH--
Confidence 57777777777663 44666666667777777777665443433322 34566666666655542211
Q ss_pred CCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccC-----CCCccceeeeccccccCC----Cchh
Q 047739 459 GNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELA-----GLPNLQVIALQENKLSGN----VPEG 529 (1099)
Q Consensus 459 ~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~-----~l~~L~~L~L~~N~l~~~----~p~~ 529 (1099)
.++..+..+++|++|++++|.+++..+..+. ..++|+.|++++|.+++. ++..
T Consensus 161 ------------------~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 222 (461)
T 1z7x_W 161 ------------------PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGI 222 (461)
T ss_dssp ------------------HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHH
T ss_pred ------------------HHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHH
Confidence 1122333344555555555554433222222 234666666666666543 3555
Q ss_pred hhcccccceecccccccCCCC-----CCcccccceeeEEEccCCcCCCC----CCCCCCCCCCCceEEecCCcccCcCCc
Q 047739 530 FSSLMSLRYLNLSFNGFVGQI-----PATFSFLRSVVVLSFSGNHISGS----IPPELGNCSDLEVLELRSNSLTGHIPT 600 (1099)
Q Consensus 530 ~~~l~~L~~L~Ls~N~l~~~~-----~~~l~~l~~L~~L~ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~p~ 600 (1099)
+..+++|++|++++|.+++.. +..+..+++|+.|++++|+++.. ++..+..+++|++|+|++|.+++..+.
T Consensus 223 l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 302 (461)
T 1z7x_W 223 VASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGAR 302 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHH
T ss_pred HHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHH
Confidence 666677777777777765432 22233467788888888887743 566677789999999999999765555
Q ss_pred chhcc-----CcccEEeccCcccccc----CCcccCCCCCCCEEECcCccccccCChhhhc-----cCCCCeeecCCCcC
Q 047739 601 DISHL-----SHLNVLDLSINNLTGE----IPDEISKCSSLRSLLVNSNHLSGGIPDSLAK-----LSNLAVLDLSANNL 666 (1099)
Q Consensus 601 ~~~~l-----~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~-----l~~L~~L~ls~N~l 666 (1099)
.+... ++|+.|++++|.+++. ++..+..+++|++|+|++|++++..+..+.. .++|+.|++++|++
T Consensus 303 ~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i 382 (461)
T 1z7x_W 303 LLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDV 382 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCC
Confidence 55543 6999999999999865 5677788899999999999998766666654 67999999999999
Q ss_pred CC----cCCCCccccccccccccCCCCccc
Q 047739 667 SG----EIPANLSSIFGLMNFNVSSNNLQA 692 (1099)
Q Consensus 667 ~~----~~p~~~~~~~~l~~l~l~~n~~~~ 692 (1099)
++ .+|..+..+++|+.+++++|++..
T Consensus 383 ~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 383 SDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp CHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred ChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 97 788888889999999999999874
No 299
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=3.2e-32 Score=309.34 Aligned_cols=191 Identities=14% Similarity=0.105 Sum_probs=159.3
Q ss_pred HhccccccccccccceeEEEEEECCceEEEEEECCCCCc---------cHHHHHHHHHHhhhcc---------CCcceEE
Q 047739 802 TRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSL---------DENLFRKEAEFLGKVR---------HRNLTVL 863 (1099)
Q Consensus 802 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~---------H~niv~l 863 (1099)
.++|++.+.||+|+||.||+|++ +|+.||+|++..... ..+.+.+|++++++++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46799999999999999999998 689999999854321 2377899999999986 7777777
Q ss_pred eeEEe-----------------c------------CCCceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHH
Q 047739 864 RGYYA-----------------G------------APDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVA 914 (1099)
Q Consensus 864 ~~~~~-----------------~------------~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia 914 (1099)
.+++. . +....|+||||+++|++.+.+.+ ..+++..+..++.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLT 171 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHH
Confidence 66542 1 14567999999999977766643 3479999999999999
Q ss_pred HHHHHHc-cCCceecCCCCCCEEECCCC--------------------cEEEeccccccccCCCCCCCccccccccCccc
Q 047739 915 RGLAFLH-TSNMVHGDIKPQNVLFDADF--------------------EAHLSDFGLDRLTIPTPAEASTSTTAVGTLGY 973 (1099)
Q Consensus 915 ~~L~~LH-~~~iiH~Dlk~~NIll~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y 973 (1099)
.||+||| +.+|+||||||+|||++.++ .+||+|||+|+.... ...+||..|
T Consensus 172 ~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~--------~~~~gt~~y 243 (336)
T 2vuw_A 172 ASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD--------GIVVFCDVS 243 (336)
T ss_dssp HHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET--------TEEECCCCT
T ss_pred HHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC--------CcEEEeecc
Confidence 9999999 89999999999999999887 899999999986521 235899999
Q ss_pred cCccccccCCCCCcCchhhHHHH-HHHHHhCCCCCC
Q 047739 974 VSPEAALTGETTKESDVYSFGIV-LLELLTGKRPVM 1008 (1099)
Q Consensus 974 ~aPE~~~~~~~~~~~DV~S~G~i-l~elltg~~P~~ 1008 (1099)
+|||++.+.. +.++||||+|++ .+++++|..||.
T Consensus 244 ~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 244 MDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp TCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred cChhhhcCCC-ccceehhhhhCCCCcccccccCCCc
Confidence 9999998665 889999998777 777888999974
No 300
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.97 E-value=6.4e-33 Score=341.00 Aligned_cols=454 Identities=17% Similarity=0.138 Sum_probs=259.3
Q ss_pred CCcccceEecCCcEeEEecCCCccccccccccccccccceEEccCCcc---CcccCcccc------------cCCcccEE
Q 047739 55 PCDWRGVACTNNRVTELRLPRLQLSGRISDHLSNLRMLRKLSLRSNSF---NGTIPATLA------------QCTLLRAV 119 (1099)
Q Consensus 55 ~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~---~~~~p~~~~------------~l~~L~~L 119 (1099)
|++|.+|.+...+...+ . +......+..+..++.|++|+|+++.. .|.+|..++ .+++|++|
T Consensus 41 ck~W~~~~~~~~~~l~~--~-~~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L 117 (592)
T 3ogk_B 41 CRRWFKIDSETREHVTM--A-LCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSV 117 (592)
T ss_dssp CHHHHHHHHHHCCEEEE--S-CGGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEE
T ss_pred hHHHHHhhhccccEEEE--e-eccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeE
Confidence 45899997654433332 2 223334445577899999999988543 245555444 78899999
Q ss_pred EeccccCCCccCcccccC-C-CCceeeccccc-CCCc-ccCC--cccccceeeCCCCccCCC----CCCCCccccccccc
Q 047739 120 FLQYNSLSGNLPANIGNL-S-NLEILNVAANR-LSGE-IAND--LPRNLKYFDLSSNGFSGP----IPTSISNLSQLQLI 189 (1099)
Q Consensus 120 ~l~~n~l~g~~p~~~~~l-~-~L~~L~ls~N~-l~~~-i~~~--~~~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L 189 (1099)
+|++|.+++..+..++.. + +|++|+|++|. ++.. ++.. -.++|++|+|++|.+++. ++..+.++++|++|
T Consensus 118 ~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L 197 (592)
T 3ogk_B 118 HFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVL 197 (592)
T ss_dssp EEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEE
T ss_pred EeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEE
Confidence 999999988877777664 4 49999998876 2211 1111 116888888888888755 44455677888888
Q ss_pred cccccccccccccccccccCccccccCceeEEEccCCcCCccChhhhcCCCCccEEEcccccCCCccCcccccccCCCCC
Q 047739 190 NFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSGYPP 269 (1099)
Q Consensus 190 ~ls~N~l~~~~~~~~~g~lp~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~ 269 (1099)
++++|.+++... +.++..+.++++|++|++++|.+.+ +|..+..+++|++|+++.+... ++...
T Consensus 198 ~L~~n~~~~~~~----~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~--~~~~~--------- 261 (592)
T 3ogk_B 198 NFYMTEFAKISP----KDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNED--IGMPE--------- 261 (592)
T ss_dssp ECTTCCCSSCCH----HHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCC--TTCTT---------
T ss_pred EeeccCCCccCH----HHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccc--cchHH---------
Confidence 888888763322 2455556677888888888888875 6677888888888888763322 11000
Q ss_pred cceEEEeccccccccCCCCCCCCCCceeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCch-hhhCCCCCCCEEE
Q 047739 270 SIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIP-AQIGGLWRLEELK 348 (1099)
Q Consensus 270 ~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p-~~~~~l~~L~~L~ 348 (1099)
.......+++|+.|+++++... .+|..+..+++|++|+|++|.+++... ..+.++++|++|+
T Consensus 262 ----------------~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~ 324 (592)
T 3ogk_B 262 ----------------KYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLE 324 (592)
T ss_dssp ----------------SSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEE
T ss_pred ----------------HHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEe
Confidence 0011122456777777765333 456666677777777777777654333 3356777777777
Q ss_pred ccCCccCccCCccccCCCCCCEEEccC-----------CcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCC
Q 047739 349 MANNSFGGAVPVEIKQCSSLSLLDLEG-----------NRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLE 417 (1099)
Q Consensus 349 L~~n~l~~~~~~~l~~l~~L~~L~Ls~-----------N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 417 (1099)
++++...+.++..+..+++|++|+|++ |.+++... +..+.++++|+
T Consensus 325 L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~-----------------------~~l~~~~~~L~ 381 (592)
T 3ogk_B 325 TRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGL-----------------------IALAQGCQELE 381 (592)
T ss_dssp EEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHH-----------------------HHHHHHCTTCS
T ss_pred ccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHH-----------------------HHHHhhCccCe
Confidence 773322222333334566677777762 33332111 11122244555
Q ss_pred EEEcccCcCccccchhhhC-CCCCCEEEcc----CCcCccc-----cCcccCCCCcccEEEccCCc--CCCcCCCCCC-C
Q 047739 418 NLNLRHNSLSGSLPEEVLG-MNNLSTLDLS----ENKFSGE-----VPASIGNLSQLMVFNLSGNA--FSGRIPASLG-N 484 (1099)
Q Consensus 418 ~L~L~~N~l~~~~~~~~~~-l~~L~~L~Ls----~N~l~~~-----~~~~l~~l~~L~~L~L~~N~--l~~~~~~~l~-~ 484 (1099)
+|+++.|++++..+..+.. +++|+.|+++ .|.+++. ++..+.++++|+.|+|++|. +++..+..+. .
T Consensus 382 ~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~ 461 (592)
T 3ogk_B 382 YMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQY 461 (592)
T ss_dssp EEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHS
T ss_pred EEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHh
Confidence 5555555555444444443 5555555553 4444432 22223445555555554322 3333222222 2
Q ss_pred CCCCCEEEeccCcCcc-cCCcccCCCCccceeeeccccccCC-CchhhhcccccceecccccccCCCCCCcc-cccceee
Q 047739 485 LLKLTTLDLSKQNFSG-ELPIELAGLPNLQVIALQENKLSGN-VPEGFSSLMSLRYLNLSFNGFVGQIPATF-SFLRSVV 561 (1099)
Q Consensus 485 l~~L~~L~L~~n~l~~-~~~~~l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l-~~l~~L~ 561 (1099)
+++|++|++++|++++ .++..+..+++|+.|+|++|.+++. ++..+..+++|++|++++|++++.....+ ..++.+.
T Consensus 462 ~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~ 541 (592)
T 3ogk_B 462 SPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWN 541 (592)
T ss_dssp CTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEE
T ss_pred CccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcE
Confidence 4556666666666654 2233345566666666666665433 22333456666677777666654433222 2334444
Q ss_pred EEEccC
Q 047739 562 VLSFSG 567 (1099)
Q Consensus 562 ~L~ls~ 567 (1099)
...+..
T Consensus 542 ~~~~~~ 547 (592)
T 3ogk_B 542 IELIPS 547 (592)
T ss_dssp EEEECC
T ss_pred EEEecC
Confidence 444433
No 301
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1.5e-30 Score=293.49 Aligned_cols=278 Identities=21% Similarity=0.288 Sum_probs=176.7
Q ss_pred HHHhCCCCCCCCCCCCCCCCCCCCcccceEecC----CcEeEEecCCCcccccccccc--ccccccceEEccCCccCccc
Q 047739 33 FKLNLHDPLGALNGWDSSTPAAPCDWRGVACTN----NRVTELRLPRLQLSGRISDHL--SNLRMLRKLSLRSNSFNGTI 106 (1099)
Q Consensus 33 ~k~~~~~~~~~l~~w~~~~~~~~c~w~gv~c~~----~~v~~l~l~~~~l~g~~~~~l--~~l~~L~~L~L~~n~~~~~~ 106 (1099)
.|.++.|+..+|..|+..-..+||.|.++-|.. ..+.. ..+..+ ..++..+ ...+.++.|+|++|.+. .+
T Consensus 21 ~~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~--~~g~~~-~~~~~~l~~~~~~~l~~L~L~~n~l~-~l 96 (328)
T 4fcg_A 21 GSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIET--RTGRAL-KATADLLEDATQPGRVALELRSVPLP-QF 96 (328)
T ss_dssp --CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCC--SHHHHH-HHHHHHHHHHTSTTCCEEEEESSCCS-SC
T ss_pred ccccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccc--cCCcch-hhhHHHHhcccccceeEEEccCCCch-hc
Confidence 455666777788899854334579999998842 11111 111111 1111222 24578999999999998 88
Q ss_pred CcccccCCcccEEEeccccCCCccCcccccCCCCceeecccccCCCcccCCcccccceeeCCCCccCCCCCCCCcccccc
Q 047739 107 PATLAQCTLLRAVFLQYNSLSGNLPANIGNLSNLEILNVAANRLSGEIANDLPRNLKYFDLSSNGFSGPIPTSISNLSQL 186 (1099)
Q Consensus 107 p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~N~l~~~i~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L 186 (1099)
|..++++++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..++++++|
T Consensus 97 p~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-----------------------~lp~~l~~l~~L 152 (328)
T 4fcg_A 97 PDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-----------------------ALPASIASLNRL 152 (328)
T ss_dssp CSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-----------------------CCCGGGGGCTTC
T ss_pred ChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-----------------------cCcHHHhcCcCC
Confidence 988999999999999999999 88988998888888888777765 456667777788
Q ss_pred ccccccccccccccccccccccCcccc---------ccCceeEEEccCCcCCccChhhhcCCCCccEEEcccccCCCccC
Q 047739 187 QLINFSFNKFSREVPATFEGTLPSAIA---------NCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVP 257 (1099)
Q Consensus 187 ~~L~ls~N~l~~~~~~~~~g~lp~~l~---------~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 257 (1099)
++|++++|++. +.+|..++ .+++|++|++++|+++ .+|..++.+++|++|+|++|++
T Consensus 153 ~~L~L~~n~~~--------~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l----- 218 (328)
T 4fcg_A 153 RELSIRACPEL--------TELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPL----- 218 (328)
T ss_dssp CEEEEEEETTC--------CCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCC-----
T ss_pred CEEECCCCCCc--------cccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCC-----
Confidence 88888877766 34444333 3444555555555544 3444444444444444444444
Q ss_pred cccccccCCCCCcceEEEeccccccccCCCCCCCCCCceeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhh
Q 047739 258 ASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQ 337 (1099)
Q Consensus 258 ~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~ 337 (1099)
++ +|..+..+++|++|+|++|.+.+.+|..
T Consensus 219 -------------------------------------------------~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~ 248 (328)
T 4fcg_A 219 -------------------------------------------------SA-LGPAIHHLPKLEELDLRGCTALRNYPPI 248 (328)
T ss_dssp -------------------------------------------------CC-CCGGGGGCTTCCEEECTTCTTCCBCCCC
T ss_pred -------------------------------------------------Cc-CchhhccCCCCCEEECcCCcchhhhHHH
Confidence 32 2334555666666666666666666666
Q ss_pred hCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeeccCccc
Q 047739 338 IGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLF 402 (1099)
Q Consensus 338 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l 402 (1099)
|+++++|++|+|++|.+.+.+|..+.++++|++|+|++|++.+.+|+.++++++|+.+++..+.+
T Consensus 249 ~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 249 FGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp TTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred hcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 66666666666666666666666666666666666666666666666666666666666555544
No 302
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=9.8e-32 Score=330.45 Aligned_cols=81 Identities=9% Similarity=0.041 Sum_probs=41.3
Q ss_pred CceeEEEcCCCccccC----cchhccCCCCccEEeCCCCcccc----CchhhhCCCCCCCEEEccCCccCccCCccccCC
Q 047739 294 SVLQVLDLQQNQIRGA----FPLWLTRASTLTRLDVSGNSISG----KIPAQIGGLWRLEELKMANNSFGGAVPVEIKQC 365 (1099)
Q Consensus 294 ~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~Ls~N~i~~----~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l 365 (1099)
++|++|+|++|.+++. ++..+..+++|++|+|++|.+++ .++..+.++++|++|+|++|.+.+ ++..+..+
T Consensus 164 ~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~ 242 (592)
T 3ogk_B 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAA 242 (592)
T ss_dssp TTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHC
T ss_pred CCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhh
Confidence 4455555555555443 22233445556666666665542 233334455555555555555553 34445555
Q ss_pred CCCCEEEccC
Q 047739 366 SSLSLLDLEG 375 (1099)
Q Consensus 366 ~~L~~L~Ls~ 375 (1099)
++|++|+++.
T Consensus 243 ~~L~~L~l~~ 252 (592)
T 3ogk_B 243 ANLEEFCGGS 252 (592)
T ss_dssp TTCCEEEECB
T ss_pred hHHHhhcccc
Confidence 5555555554
No 303
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=5.9e-29 Score=284.41 Aligned_cols=284 Identities=20% Similarity=0.209 Sum_probs=151.4
Q ss_pred CCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEc
Q 047739 342 WRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNL 421 (1099)
Q Consensus 342 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 421 (1099)
+.....++++|.++ .+|..+. ++|++|+|++|++++..+..+.++++|++|++++|++++..+..|.++++|++|+|
T Consensus 31 ~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (353)
T 2z80_A 31 DRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDL 107 (353)
T ss_dssp CTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEEC
Confidence 34445666666666 3444443 36666666666666554556666666666666666666666666666666666666
Q ss_pred ccCcCccccchhhhCCCCCCEEEccCCcCccccC-cccCCCCcccEEEccCC-cCCCcCCCCCCCCCCCCEEEeccCcCc
Q 047739 422 RHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVP-ASIGNLSQLMVFNLSGN-AFSGRIPASLGNLLKLTTLDLSKQNFS 499 (1099)
Q Consensus 422 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L~L~~N-~l~~~~~~~l~~l~~L~~L~L~~n~l~ 499 (1099)
++|++++..+..+.++++|++|++++|++++..+ ..+.++++|+.|++++| .+++..+..|.++++|++|++++|+++
T Consensus 108 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~ 187 (353)
T 2z80_A 108 SYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQ 187 (353)
T ss_dssp CSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcC
Confidence 6666664444446666666666666666664333 35556666666666665 344444455555556666666666555
Q ss_pred ccCCcccCCCCccceeeeccccccCCCchhhhcccccceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCC
Q 047739 500 GELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELG 579 (1099)
Q Consensus 500 ~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~ 579 (1099)
+..|..+..+++|+.|++++|+++...+..+..+++|++|++++|.+++..+..+.. ..
T Consensus 188 ~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~---------------------~~ 246 (353)
T 2z80_A 188 SYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELST---------------------GE 246 (353)
T ss_dssp EECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC---------------------------
T ss_pred ccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccc---------------------cc
Confidence 555555555555555555555554222222233445555555555444322221110 11
Q ss_pred CCCCCceEEecCCcccCcCCcchhccCcccEEeccCccccccCCcccCCCCCCCEEECcCccccccCChh-hhccCCCCe
Q 047739 580 NCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDS-LAKLSNLAV 658 (1099)
Q Consensus 580 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~ 658 (1099)
....++.++|++|.+++ |.+. .+|..+..+++|+.|+|++|+++ .+|.. +.++++|+.
T Consensus 247 ~~~~l~~l~L~~~~l~~-------------------~~l~-~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~ 305 (353)
T 2z80_A 247 TNSLIKKFTFRNVKITD-------------------ESLF-QVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQK 305 (353)
T ss_dssp CCCCCCEEEEESCBCCH-------------------HHHH-HHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCE
T ss_pred ccchhhccccccccccC-------------------cchh-hhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCE
Confidence 23445555555555443 1221 23444455555555555555555 33333 355555555
Q ss_pred eecCCCcCCCcC
Q 047739 659 LDLSANNLSGEI 670 (1099)
Q Consensus 659 L~ls~N~l~~~~ 670 (1099)
|++++|++++..
T Consensus 306 L~L~~N~~~~~~ 317 (353)
T 2z80_A 306 IWLHTNPWDCSC 317 (353)
T ss_dssp EECCSSCBCCCH
T ss_pred EEeeCCCccCcC
Confidence 555555555433
No 304
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=6.7e-29 Score=300.94 Aligned_cols=294 Identities=26% Similarity=0.342 Sum_probs=216.6
Q ss_pred CCCCCCCCCCCCCCCCCCcccceEec--------CCcEeEEecCCCccccccccccccccccceEEccCCccCcccCccc
Q 047739 39 DPLGALNGWDSSTPAAPCDWRGVACT--------NNRVTELRLPRLQLSGRISDHLSNLRMLRKLSLRSNSFNGTIPATL 110 (1099)
Q Consensus 39 ~~~~~l~~w~~~~~~~~c~w~gv~c~--------~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~ 110 (1099)
|.....++|.... .||.|+|..|. ...++.|+++++++. .+|+.+. ++|+.|+|++|.++ .+|.
T Consensus 7 ~~~~~w~~W~~~~--~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~-- 78 (622)
T 3g06_A 7 EYDAVWSAWRRAA--PAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA-- 78 (622)
T ss_dssp ---CHHHHHHHTC--CGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC--
T ss_pred HHHHHHHHHHhcC--CcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC--
Confidence 3455667887543 47999775442 256889999999988 7887776 89999999999988 5776
Q ss_pred ccCCcccEEEeccccCCCccCcccccCCCCceeecccccCCCcccCCcccccceeeCCCCccCCCCCCCCcccccccccc
Q 047739 111 AQCTLLRAVFLQYNSLSGNLPANIGNLSNLEILNVAANRLSGEIANDLPRNLKYFDLSSNGFSGPIPTSISNLSQLQLIN 190 (1099)
Q Consensus 111 ~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~N~l~~~i~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ 190 (1099)
.+++|++|+|++|+|+ .+|. .+++|++|+|++|.+++ +|. ..++|+.|++++|+|++ +|.. +++|++|+
T Consensus 79 -~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~-~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~ 147 (622)
T 3g06_A 79 -LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA-LPSGLCKLWIFGNQLTS-LPVL---PPGLQELS 147 (622)
T ss_dssp -CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC-CCTTCCEEECCSSCCSC-CCCC---CTTCCEEE
T ss_pred -cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC-CCCCcCEEECCCCCCCc-CCCC---CCCCCEEE
Confidence 6789999999999998 4666 67889999999999886 444 56788899999998884 5554 48888888
Q ss_pred ccccccccccccccccccCccccccCceeEEEccCCcCCccChhhhcCCCCccEEEcccccCCCccCcccccccCCCCCc
Q 047739 191 FSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSGYPPS 270 (1099)
Q Consensus 191 ls~N~l~~~~~~~~~g~lp~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~ 270 (1099)
|++|++++ +|. .+++|+.|++++|.+++ +| ..+++|++|+|++|+|++ +|.
T Consensus 148 Ls~N~l~~---------l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~------------ 198 (622)
T 3g06_A 148 VSDNQLAS---------LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPT------------ 198 (622)
T ss_dssp CCSSCCSC---------CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC------------
T ss_pred CcCCcCCC---------cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCC------------
Confidence 88888873 333 23578888888888876 34 456788888888888873 332
Q ss_pred ceEEEeccccccccCCCCCCCCCCceeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEcc
Q 047739 271 IRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMA 350 (1099)
Q Consensus 271 l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~ 350 (1099)
..++|+.|++++|.++. +|. .+++|++|+|++|+|++ +| ..+++|++|+|+
T Consensus 199 ---------------------~~~~L~~L~L~~N~l~~-l~~---~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls 249 (622)
T 3g06_A 199 ---------------------LPSELYKLWAYNNRLTS-LPA---LPSGLKELIVSGNRLTS-LP---VLPSELKELMVS 249 (622)
T ss_dssp ---------------------CCTTCCEEECCSSCCSS-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECC
T ss_pred ---------------------ccchhhEEECcCCcccc-cCC---CCCCCCEEEccCCccCc-CC---CCCCcCcEEECC
Confidence 12457777777777774 332 23678888888888875 44 455778888888
Q ss_pred CCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCC
Q 047739 351 NNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLP 414 (1099)
Q Consensus 351 ~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 414 (1099)
+|+|+. +|. .+++|++|+|++|+|+ .+|..+.++++|+.|+|++|.+++..|..+.+++
T Consensus 250 ~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 250 GNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 888874 444 5677888888888888 6777888888888888888888887777766554
No 305
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.2e-28 Score=281.71 Aligned_cols=286 Identities=19% Similarity=0.229 Sum_probs=227.4
Q ss_pred CCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCee
Q 047739 316 RASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSL 395 (1099)
Q Consensus 316 ~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 395 (1099)
.++.....|+++|.++ .+|..+. ++|++|++++|++++..+..+.++++|++|+|++|++++..|..|.++++|++|
T Consensus 29 ~C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 29 SCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp EECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 3455667999999998 5777665 489999999999998878799999999999999999998888899999999999
Q ss_pred eccCccccccCCccCCCCCCCCEEEcccCcCccccc-hhhhCCCCCCEEEccCC-cCccccCcccCCCCcccEEEccCCc
Q 047739 396 TLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLP-EEVLGMNNLSTLDLSEN-KFSGEVPASIGNLSQLMVFNLSGNA 473 (1099)
Q Consensus 396 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N-~l~~~~~~~l~~l~~L~~L~L~~N~ 473 (1099)
+|++|++++..+..|.++++|++|+|++|++++..+ ..+..+++|++|++++| .++...+..+.++++|+.|++++|+
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 185 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASD 185 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCC
Confidence 999999998777779999999999999999995433 47889999999999999 5777778899999999999999999
Q ss_pred CCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhcccccceecccccccCCCCCCc
Q 047739 474 FSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPAT 553 (1099)
Q Consensus 474 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 553 (1099)
+++..|..+.++++|++|++++|++....+..+..+++|+.|++++|++++..+..+...
T Consensus 186 l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~-------------------- 245 (353)
T 2z80_A 186 LQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTG-------------------- 245 (353)
T ss_dssp CCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC-------------------------
T ss_pred cCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccc--------------------
Confidence 998889999999999999999999975544445668999999999999987654433211
Q ss_pred ccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccCcccEEeccCccccccCCcc-cCCCCCC
Q 047739 554 FSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDE-ISKCSSL 632 (1099)
Q Consensus 554 l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L 632 (1099)
.....++.++++++.+ ++|.+. .+|..+..+++|+.|+|++|+++ .+|.. +..+++|
T Consensus 246 -~~~~~l~~l~L~~~~l-------------------~~~~l~-~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L 303 (353)
T 2z80_A 246 -ETNSLIKKFTFRNVKI-------------------TDESLF-QVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSL 303 (353)
T ss_dssp --CCCCCCEEEEESCBC-------------------CHHHHH-HHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTC
T ss_pred -cccchhhccccccccc-------------------cCcchh-hhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCC
Confidence 1122344455544433 334444 45566666777777777777776 45555 3677777
Q ss_pred CEEECcCccccccC
Q 047739 633 RSLLVNSNHLSGGI 646 (1099)
Q Consensus 633 ~~L~Ls~N~l~~~~ 646 (1099)
++|+|++|++.+..
T Consensus 304 ~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 304 QKIWLHTNPWDCSC 317 (353)
T ss_dssp CEEECCSSCBCCCH
T ss_pred CEEEeeCCCccCcC
Confidence 77777777777543
No 306
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=5.7e-30 Score=287.18 Aligned_cols=253 Identities=20% Similarity=0.234 Sum_probs=142.4
Q ss_pred cccccccceEEccCCccCcccCcccccCCcccEEEeccccC-CCccCcccc-------cCCCCceeecccccCCCcccCC
Q 047739 86 LSNLRMLRKLSLRSNSFNGTIPATLAQCTLLRAVFLQYNSL-SGNLPANIG-------NLSNLEILNVAANRLSGEIAND 157 (1099)
Q Consensus 86 l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l-~g~~p~~~~-------~l~~L~~L~ls~N~l~~~i~~~ 157 (1099)
.+..+.|+.|+|++|.+ .+|..+... |++|+|++|++ .+.+|..+. ++++|++|+|++|++++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 45566677777777776 666655554 66777777777 355665554 5666666666655555444432
Q ss_pred cccccceeeCCCCccCCCCCCCCccccccccccccccccccccccccccccCcccccc-----CceeEEEccCCcCCccC
Q 047739 158 LPRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANC-----SSLVHLSAQGNALGGVI 232 (1099)
Q Consensus 158 ~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l~~l-----~~L~~L~l~~N~l~~~~ 232 (1099)
+. ++.+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..
T Consensus 115 ~~--------------------~~~l~~L~~L~Ls~N~l~~~---------~~~~~~l~~~~~~~L~~L~L~~N~l~~~~ 165 (312)
T 1wwl_A 115 LL--------------------EATGPDLNILNLRNVSWATR---------DAWLAELQQWLKPGLKVLSIAQAHSLNFS 165 (312)
T ss_dssp SS--------------------SCCSCCCSEEEEESCBCSSS---------SSHHHHHHTTCCTTCCEEEEESCSCCCCC
T ss_pred HH--------------------HhcCCCccEEEccCCCCcch---------hHHHHHHHHhhcCCCcEEEeeCCCCccch
Confidence 20 14444444444444444411 2223333 45555555555555555
Q ss_pred hhhhcCCCCccEEEcccccCCCcc--CcccccccCCCCCcceEEEeccccccccCCCCCCCCCCceeEEEcCCCcccc--
Q 047739 233 PPAIGALPKLQVVSLAQNNLSGVV--PASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRG-- 308 (1099)
Q Consensus 233 p~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~~-- 308 (1099)
|..|+.+++|++|+|++|++.+.+ |... ....+++|++|+|++|+|++
T Consensus 166 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~----------------------------~~~~l~~L~~L~L~~N~l~~~~ 217 (312)
T 1wwl_A 166 CEQVRVFPALSTLDLSDNPELGERGLISAL----------------------------CPLKFPTLQVLALRNAGMETPS 217 (312)
T ss_dssp TTTCCCCSSCCEEECCSCTTCHHHHHHHHS----------------------------CTTSCTTCCEEECTTSCCCCHH
T ss_pred HHHhccCCCCCEEECCCCCcCcchHHHHHH----------------------------HhccCCCCCEEECCCCcCcchH
Confidence 555555555555555555554331 1110 00113445555555555552
Q ss_pred -CcchhccCCCCccEEeCCCCccccCch-hhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccc
Q 047739 309 -AFPLWLTRASTLTRLDVSGNSISGKIP-AQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFL 386 (1099)
Q Consensus 309 -~~~~~~~~l~~L~~L~Ls~N~i~~~~p-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 386 (1099)
.....+..+++|++|+|++|++++..| ..+..+++|++|+|++|+++ .+|..+. ++|++|||++|+|++. |. +
T Consensus 218 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~ 292 (312)
T 1wwl_A 218 GVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-P 292 (312)
T ss_dssp HHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-T
T ss_pred HHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-H
Confidence 122334456677777777777766554 34555677777777777776 5555555 6777777777777744 55 6
Q ss_pred cCCCCCCeeeccCccccc
Q 047739 387 GDIRGLKSLTLAANLFSG 404 (1099)
Q Consensus 387 ~~l~~L~~L~L~~n~l~~ 404 (1099)
..+++|++|+|++|++++
T Consensus 293 ~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 293 DELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp TTSCEEEEEECTTCTTTC
T ss_pred hhCCCCCEEeccCCCCCC
Confidence 777777777777777764
No 307
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=5.8e-28 Score=270.33 Aligned_cols=261 Identities=23% Similarity=0.256 Sum_probs=191.1
Q ss_pred CceeEEEcCCCccccCcchhccCCCCccEEeCCCCccccC--chhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEE
Q 047739 294 SVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGK--IPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLL 371 (1099)
Q Consensus 294 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~--~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 371 (1099)
++|++|+|++|+++.+.+..|..+++|++|+|++|.++.. .+..+.++++|++|+|++|.+. .+|..+..+++|++|
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L 106 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHL 106 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEE
Confidence 5678888888888866666678888888888888888733 3566777888888888888887 456667788888888
Q ss_pred EccCCcCCCCCC-ccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCcc-ccchhhhCCCCCCEEEccCCc
Q 047739 372 DLEGNRFSGEIP-EFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSG-SLPEEVLGMNNLSTLDLSENK 449 (1099)
Q Consensus 372 ~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~ 449 (1099)
+|++|++++..+ ..+..+++|++|++++|.+.+..+..|.++++|++|+|++|.+++ ..|..+..+++|++|+|++|.
T Consensus 107 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 186 (306)
T 2z66_A 107 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ 186 (306)
T ss_dssp ECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSC
T ss_pred ECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCC
Confidence 888888875544 567778888888888888887777778888888888888888775 467777778888888888888
Q ss_pred CccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCC-ccceeeeccccccCCCch
Q 047739 450 FSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLP-NLQVIALQENKLSGNVPE 528 (1099)
Q Consensus 450 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~-~L~~L~L~~N~l~~~~p~ 528 (1099)
+++..|..+..+++|+.|+|++|++++..+..+..+++|++|++++|++++..|..+..++ +|+.|+|++|.+++..+.
T Consensus 187 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~ 266 (306)
T 2z66_A 187 LEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 266 (306)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGG
T ss_pred cCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccCh
Confidence 8777777778888888888888888766666777778888888888888777777777774 788888888877654321
Q ss_pred -h-hhcccccceecccccccCCCCCCccc
Q 047739 529 -G-FSSLMSLRYLNLSFNGFVGQIPATFS 555 (1099)
Q Consensus 529 -~-~~~l~~L~~L~Ls~N~l~~~~~~~l~ 555 (1099)
. ..-+...+.+....+.+....|..+.
T Consensus 267 ~~~~~~l~~~~~~~~~~~~~~C~~p~~~~ 295 (306)
T 2z66_A 267 QSFLQWIKDQRQLLVEVERMECATPSDKQ 295 (306)
T ss_dssp HHHHHHHHHTGGGBSCGGGCBEEESGGGT
T ss_pred HHHHHHHHhhhhhhccccccccCCchhhC
Confidence 1 12233444455555555544454443
No 308
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=3e-28 Score=272.72 Aligned_cols=182 Identities=27% Similarity=0.386 Sum_probs=82.2
Q ss_pred CCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccC-cccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEE
Q 047739 413 LPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVP-ASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTL 491 (1099)
Q Consensus 413 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L 491 (1099)
+++|++|+|++|.++ .+|..+.++++|++|++++|.+++..+ ..+..+++|+.|++++|.+.+..+..+.++++|++|
T Consensus 77 ~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 155 (306)
T 2z66_A 77 TTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 155 (306)
T ss_dssp CSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEE
T ss_pred ccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEE
Confidence 334444444444433 233333344444444444444433222 234444444444444444444444444444444444
Q ss_pred EeccCcCcc-cCCcccCCCCccceeeeccccccCCCchhhhcccccceecccccccCCCCCCcccccceeeEEEccCCcC
Q 047739 492 DLSKQNFSG-ELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHI 570 (1099)
Q Consensus 492 ~L~~n~l~~-~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l 570 (1099)
++++|.+++ ..|..+..+++|+.|++++|++++..|..|..+++|++|++++|++++..+..+..+++|+.|++++|++
T Consensus 156 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 235 (306)
T 2z66_A 156 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 235 (306)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCC
T ss_pred ECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCC
Confidence 444444443 2344444444444444444444444444444444555555555555444444444444455555555555
Q ss_pred CCCCCCCCCCCC-CCceEEecCCccc
Q 047739 571 SGSIPPELGNCS-DLEVLELRSNSLT 595 (1099)
Q Consensus 571 ~~~~p~~l~~l~-~L~~L~L~~N~l~ 595 (1099)
++..|..+..++ +|++|+|++|.++
T Consensus 236 ~~~~~~~~~~~~~~L~~L~L~~N~~~ 261 (306)
T 2z66_A 236 MTSKKQELQHFPSSLAFLNLTQNDFA 261 (306)
T ss_dssp CBCSSSSCCCCCTTCCEEECTTCCEE
T ss_pred cccCHHHHHhhhccCCEEEccCCCee
Confidence 544444555442 5555555555554
No 309
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.5e-29 Score=283.64 Aligned_cols=203 Identities=17% Similarity=0.164 Sum_probs=156.7
Q ss_pred CCCCCCCCCCCCCCCcccceE--ecCCcEeEEecCCCccccccccccccccccceEEccCCcc-CcccCcccc-------
Q 047739 42 GALNGWDSSTPAAPCDWRGVA--CTNNRVTELRLPRLQLSGRISDHLSNLRMLRKLSLRSNSF-NGTIPATLA------- 111 (1099)
Q Consensus 42 ~~l~~w~~~~~~~~c~w~gv~--c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~-~~~~p~~~~------- 111 (1099)
+...+|... ..|+.|..+. |...+++.+++.++.+ .+|+.+... |+.|+|++|.+ .+.+|..+.
T Consensus 19 ~~~~~~~~~--~~c~~~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~ 92 (312)
T 1wwl_A 19 DPKPDWSSA--FNCLGAADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVL 92 (312)
T ss_dssp SSSCCGGGG--GGSSSCSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHH
T ss_pred ccccchHHH--hhhhccccEEEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhc
Confidence 335678643 2355666654 4457789999999999 888777766 99999999999 567888887
Q ss_pred cCCcccEEEeccccCCCccCccc--ccCCCCceeecccccCCCcccCCcc-------cccceeeCCCCccCCCCCCCCcc
Q 047739 112 QCTLLRAVFLQYNSLSGNLPANI--GNLSNLEILNVAANRLSGEIANDLP-------RNLKYFDLSSNGFSGPIPTSISN 182 (1099)
Q Consensus 112 ~l~~L~~L~l~~n~l~g~~p~~~--~~l~~L~~L~ls~N~l~~~i~~~~~-------~~L~~L~ls~N~l~~~~p~~~~~ 182 (1099)
++++|++|+|++|+++|.+|..+ +.+++|++|+|++|++++. |..+. ++|++|+|++|++++..|..|++
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc
Confidence 89999999999999999999987 9999999999999999987 55433 68888888888888877788888
Q ss_pred ccccccccccccccccccccccccccCccc--cccCceeEEEccCCcCCcc---ChhhhcCCCCccEEEcccccCCCccC
Q 047739 183 LSQLQLINFSFNKFSREVPATFEGTLPSAI--ANCSSLVHLSAQGNALGGV---IPPAIGALPKLQVVSLAQNNLSGVVP 257 (1099)
Q Consensus 183 l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l--~~l~~L~~L~l~~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p 257 (1099)
+++|++|+|++|++.+.. .+|..+ +.+++|++|++++|++++. ....+..+++|++|+|++|++++..|
T Consensus 172 l~~L~~L~Ls~N~l~~~~------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 245 (312)
T 1wwl_A 172 FPALSTLDLSDNPELGER------GLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAG 245 (312)
T ss_dssp CSSCCEEECCSCTTCHHH------HHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCC
T ss_pred CCCCCEEECCCCCcCcch------HHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccc
Confidence 888888888888876321 123334 6677888888888888732 22345677788888888887775443
No 310
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1.4e-27 Score=264.31 Aligned_cols=236 Identities=23% Similarity=0.223 Sum_probs=119.8
Q ss_pred CccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCc-CCCCCCccccCCCCCCeeec
Q 047739 319 TLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNR-FSGEIPEFLGDIRGLKSLTL 397 (1099)
Q Consensus 319 ~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L 397 (1099)
+|++|+|++|.|++..+..|.++++|++|+|++|.+++..+..+..+++|++|+|++|+ ++...|..+..+++|++|++
T Consensus 33 ~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l 112 (285)
T 1ozn_A 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (285)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEEC
Confidence 44444444444444333444444444444444444444444444444444444444443 44333444444555555555
Q ss_pred cCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCCCc
Q 047739 398 AANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGR 477 (1099)
Q Consensus 398 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 477 (1099)
++|.+++..+..|.++++|++|++++|++++..+..+..+++|++|+|++|++++..+..+..+++|+.|++++|++++.
T Consensus 113 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 192 (285)
T 1ozn_A 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHV 192 (285)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccccc
Confidence 55555544445555555555555555555544444455555555555555555544444455555555555555555555
Q ss_pred CCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhcccccceecccccccCCCCCCccc
Q 047739 478 IPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATFS 555 (1099)
Q Consensus 478 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 555 (1099)
.|..|.++++|+.|++++|++++..+..+..+++|+.|++++|.+....+.. .-...++.+..+.+.+....|..+.
T Consensus 193 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 193 HPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGGGT
T ss_pred CHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchHhC
Confidence 5555555556666666666665544445555666666666666655332211 1123344455555555555555443
No 311
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=2.4e-27 Score=262.37 Aligned_cols=268 Identities=21% Similarity=0.223 Sum_probs=177.5
Q ss_pred eEEEeccccccccCCCCCCCCCCceeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccC
Q 047739 272 RVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMAN 351 (1099)
Q Consensus 272 ~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~ 351 (1099)
+.++.+.+.++.++.. ..+.|++|+|++|++++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 14 ~~~~c~~~~l~~ip~~----~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQAVPVG----IPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCSSCCTT----CCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCcccCCcC----CCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 4566677777666542 245677777777777766666677777777777777777766667777777777777777
Q ss_pred Cc-cCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCcccc
Q 047739 352 NS-FGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSL 430 (1099)
Q Consensus 352 n~-l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 430 (1099)
|. ++...+..+..+++|++|+|++|++++..|..+..+++|++|++++|++++..+..|.++++|++|+|++|++++..
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccC
Confidence 75 66555666777777777777777777666666777777777777777777666666777777777777777777555
Q ss_pred chhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCC
Q 047739 431 PEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLP 510 (1099)
Q Consensus 431 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~ 510 (1099)
+..+.++++|+.|+|++|.+++..|..+.++++|+.|++++|++++..+..+.++++|++|++++|.+....+.. .-..
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~ 248 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWA 248 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHH
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHH
Confidence 555677777777777777777666777777777777777777777655556677777777777777766332211 1123
Q ss_pred ccceeeeccccccCCCchhhhc--ccccceeccccc
Q 047739 511 NLQVIALQENKLSGNVPEGFSS--LMSLRYLNLSFN 544 (1099)
Q Consensus 511 ~L~~L~L~~N~l~~~~p~~~~~--l~~L~~L~Ls~N 544 (1099)
.++.+....+.+....|..+.+ +..++..++.+|
T Consensus 249 ~l~~~~~~~~~~~c~~p~~l~g~~l~~l~~~~l~~C 284 (285)
T 1ozn_A 249 WLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQGC 284 (285)
T ss_dssp HHHHCCSEECCCBEEESGGGTTCBGGGSCGGGSCCC
T ss_pred HHHhcccccCccccCCchHhCCcChhhcCHHHhccC
Confidence 3445555666666556655543 334444444433
No 312
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=1.3e-28 Score=292.80 Aligned_cols=234 Identities=22% Similarity=0.191 Sum_probs=120.0
Q ss_pred CCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEe
Q 047739 414 PGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDL 493 (1099)
Q Consensus 414 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L 493 (1099)
++|++|+|++|.+++..|..|..+++|++|+|++|.+++..| +..+++|+.|+|++|.+++..+ .++|++|++
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L 106 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHA 106 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEEC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEEC
Confidence 355555555555555445555555555555555555554333 5555555555555555543221 144455555
Q ss_pred ccCcCcccCCcccCCCCccceeeeccccccCCCchhhhcccccceecccccccCCCCCCcccccceeeEEEccCCcCCCC
Q 047739 494 SKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGS 573 (1099)
Q Consensus 494 ~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~ 573 (1099)
++|.++ +..+. .+++|++|+|++|.+++..|..++.+++|+.|++++|++++.
T Consensus 107 ~~N~l~------------------------~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 159 (487)
T 3oja_A 107 ANNNIS------------------------RVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTV 159 (487)
T ss_dssp CSSCCC------------------------CEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEE
T ss_pred cCCcCC------------------------CCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCc
Confidence 555444 33322 234455555555555544455555555555555555555544
Q ss_pred CCCCCC-CCCCCceEEecCCcccCcCCcchhccCcccEEeccCccccccCCcccCCCCCCCEEECcCccccccCChhhhc
Q 047739 574 IPPELG-NCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAK 652 (1099)
Q Consensus 574 ~p~~l~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~ 652 (1099)
+|..+. .+++|+.|+|++|.+++. |. ...+++|+.|+|++|.+++ +|..+..+++|+.|+|++|+|+ .+|..+..
T Consensus 160 ~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~-~lp~~l~~ 235 (487)
T 3oja_A 160 NFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRF 235 (487)
T ss_dssp EGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCC
T ss_pred ChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCc-ccchhhcc
Confidence 444443 455555555555555533 21 2235555555555555553 3334555555555566555555 24555555
Q ss_pred cCCCCeeecCCCcCC-CcCCCCcccccccccccc
Q 047739 653 LSNLAVLDLSANNLS-GEIPANLSSIFGLMNFNV 685 (1099)
Q Consensus 653 l~~L~~L~ls~N~l~-~~~p~~~~~~~~l~~l~l 685 (1099)
+++|+.|++++|+++ +.+|..+..+..+..+++
T Consensus 236 l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~ 269 (487)
T 3oja_A 236 SQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAK 269 (487)
T ss_dssp CTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHH
T ss_pred CCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEec
Confidence 555666666666555 444444555555555543
No 313
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=1.1e-26 Score=273.82 Aligned_cols=246 Identities=23% Similarity=0.247 Sum_probs=132.5
Q ss_pred eeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccC
Q 047739 296 LQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEG 375 (1099)
Q Consensus 296 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~ 375 (1099)
...++.+++.++. +|..+. ++++.|+|++|+|++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~~-iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLRE-VPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCSS-CCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcCc-CCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 3455666666653 333332 4566666666666665556666666666666666666655556666666666666666
Q ss_pred CcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccC-cCccccchhhhCCCCCCEEEccCCcCcccc
Q 047739 376 NRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHN-SLSGSLPEEVLGMNNLSTLDLSENKFSGEV 454 (1099)
Q Consensus 376 N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 454 (1099)
|++++..+..|..+++|++|+|++|+++...+..|.++++|++|+|++| .+....+..|.++++|++|+|++|+++. +
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~ 200 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-I 200 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-C
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-c
Confidence 6666444455666666666666666666555556666666666666663 3332233345555556666666555552 2
Q ss_pred CcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhccc
Q 047739 455 PASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLM 534 (1099)
Q Consensus 455 ~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 534 (1099)
| .+..+++|+.|+|++|++++..|..|.++++|+.|++++|++++..+..|.++++|+.|+|++|++++..+..|..++
T Consensus 201 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 279 (440)
T 3zyj_A 201 P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLH 279 (440)
T ss_dssp C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCT
T ss_pred c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcccc
Confidence 2 244445555555555555544444455555555555555544444444444444444444444444433333333344
Q ss_pred ccceeccccccc
Q 047739 535 SLRYLNLSFNGF 546 (1099)
Q Consensus 535 ~L~~L~Ls~N~l 546 (1099)
+|+.|+|++|.+
T Consensus 280 ~L~~L~L~~Np~ 291 (440)
T 3zyj_A 280 HLERIHLHHNPW 291 (440)
T ss_dssp TCCEEECCSSCE
T ss_pred CCCEEEcCCCCc
Confidence 444444444433
No 314
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=9.6e-27 Score=275.36 Aligned_cols=247 Identities=23% Similarity=0.241 Sum_probs=140.6
Q ss_pred eeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccC
Q 047739 296 LQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEG 375 (1099)
Q Consensus 296 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~ 375 (1099)
...++.+++.++. +|..+. +++++|+|++|.|++..|..|.++++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 56 ~~~v~c~~~~l~~-iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLSE-VPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcCc-cCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 3456666666653 333332 4667777777777666666666666677777766666666666666666666666666
Q ss_pred CcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccC-cCccccchhhhCCCCCCEEEccCCcCcccc
Q 047739 376 NRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHN-SLSGSLPEEVLGMNNLSTLDLSENKFSGEV 454 (1099)
Q Consensus 376 N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 454 (1099)
|++++..+..|..+++|++|+|++|+++...+..|.++++|++|+|++| .+....+..|.++++|++|+|++|++++.
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~- 211 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM- 211 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-
Confidence 6666554555666666666666666665555555666666666666653 33322223344555555555555555422
Q ss_pred CcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhccc
Q 047739 455 PASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLM 534 (1099)
Q Consensus 455 ~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 534 (1099)
| . +..+++|++|+|++|++++..|..|.++++|+.|+|++|++++..+..|..++
T Consensus 212 ~-~------------------------~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 266 (452)
T 3zyi_A 212 P-N------------------------LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLA 266 (452)
T ss_dssp C-C------------------------CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred c-c------------------------ccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCC
Confidence 1 2 34444455555555555544455555555555555555555555555555555
Q ss_pred ccceecccccccCCCCCCcccccceeeEEEccCCcCC
Q 047739 535 SLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHIS 571 (1099)
Q Consensus 535 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~ 571 (1099)
+|++|+|++|++++..+..+..+++|+.|+|++|++.
T Consensus 267 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 267 SLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp TCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred CCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 5666666666665555555555666666666666554
No 315
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=1.1e-28 Score=277.43 Aligned_cols=263 Identities=18% Similarity=0.183 Sum_probs=169.2
Q ss_pred eccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCC
Q 047739 396 TLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFS 475 (1099)
Q Consensus 396 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 475 (1099)
+++.+.+.......+..+++|++|+|++|++++..|..|..+++|++|+|++|.+++..+ +..+++|++|+|++|+++
T Consensus 16 ~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~ 93 (317)
T 3o53_A 16 KVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQ 93 (317)
T ss_dssp SCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEE
T ss_pred eccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccc
Confidence 333344433333334444555555555555555555555555555555555555554333 555555666666665555
Q ss_pred CcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhcccccceecccccccCCCCCCcc-
Q 047739 476 GRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATF- 554 (1099)
Q Consensus 476 ~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l- 554 (1099)
+.. ..++|++|++++|++++..+. .+++|+.|++++|++++..+..+..+++|++|++++|.+++..+..+
T Consensus 94 ~l~-----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 165 (317)
T 3o53_A 94 ELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELA 165 (317)
T ss_dssp EEE-----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGG
T ss_pred ccc-----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHh
Confidence 322 225666666666666644332 24556666677776666555566666777777777777766555554
Q ss_pred cccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccCcccEEeccCccccccCCcccCCCCCCCE
Q 047739 555 SFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSLRS 634 (1099)
Q Consensus 555 ~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 634 (1099)
..+++|++|++++|++++. +. ...+++|++|+|++|+++ .+|..+..+++|+.|+|++|+++ .+|..+..+++|+.
T Consensus 166 ~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~ 241 (317)
T 3o53_A 166 ASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEH 241 (317)
T ss_dssp GGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCE
T ss_pred hccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCC-cchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCE
Confidence 3566777777777777643 32 234788888888888888 45666888888888888888888 57888888888888
Q ss_pred EECcCcccc-ccCChhhhccCCCCeeecCCC-cCCCcCCC
Q 047739 635 LLVNSNHLS-GGIPDSLAKLSNLAVLDLSAN-NLSGEIPA 672 (1099)
Q Consensus 635 L~Ls~N~l~-~~~p~~l~~l~~L~~L~ls~N-~l~~~~p~ 672 (1099)
|++++|+++ +.+|..+..+++|+.+++++| .++|..|.
T Consensus 242 L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 242 FDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp EECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred EEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 888888887 777888888888888888844 45655544
No 316
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=8.4e-27 Score=275.86 Aligned_cols=247 Identities=21% Similarity=0.183 Sum_probs=140.8
Q ss_pred CeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCC
Q 047739 393 KSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGN 472 (1099)
Q Consensus 393 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N 472 (1099)
..++.+++.++. +|..+. ++|++|+|++|++++..+..|.++++|+.|+|++|.+++..+..|.++++|++|+|++|
T Consensus 57 ~~v~c~~~~l~~-iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 57 SKVVCTRRGLSE-VPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp CEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred cEEEECCCCcCc-cCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 344444444442 233222 34555555555555444445555555555555555555444445555555555555555
Q ss_pred cCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhcccccceeccccc-ccCCCCC
Q 047739 473 AFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFN-GFVGQIP 551 (1099)
Q Consensus 473 ~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~~ 551 (1099)
++++..+..|.++++|++|+|++|+++ ...+..|..+++|++|++++| .+....+
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~------------------------~~~~~~~~~l~~L~~L~l~~~~~l~~i~~ 189 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIE------------------------SIPSYAFNRVPSLMRLDLGELKKLEYISE 189 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCC------------------------EECTTTTTTCTTCCEEECCCCTTCCEECT
T ss_pred cCCccChhhhcccCCCCEEECCCCCcc------------------------eeCHhHHhcCCcccEEeCCCCCCccccCh
Confidence 554433344444444444444444444 333344445555555555552 2322223
Q ss_pred CcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccCcccEEeccCccccccCCcccCCCCC
Q 047739 552 ATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSS 631 (1099)
Q Consensus 552 ~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 631 (1099)
..|..+++|+.|++++|++++ +| .+..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..|..+..+++
T Consensus 190 ~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 267 (452)
T 3zyi_A 190 GAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLAS 267 (452)
T ss_dssp TTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred hhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCC
Confidence 345555566666666666653 23 3666677777777777777666677777777777777777777666667777777
Q ss_pred CCEEECcCccccccCChhhhccCCCCeeecCCCcCCC
Q 047739 632 LRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLSG 668 (1099)
Q Consensus 632 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~ 668 (1099)
|+.|+|++|+|++..+..+..+++|+.|+|++|++..
T Consensus 268 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 268 LVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp CCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred CCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 7777777777776556666777777777777777653
No 317
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=1.2e-26 Score=273.38 Aligned_cols=247 Identities=24% Similarity=0.261 Sum_probs=153.4
Q ss_pred CCEEEccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccC
Q 047739 368 LSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSE 447 (1099)
Q Consensus 368 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 447 (1099)
...++.+++.++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 456666666666 5555444 4566666666666666666666677777777777777666666666677777777777
Q ss_pred CcCccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCc-CcccCCcccCCCCccceeeeccccccCCC
Q 047739 448 NKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQN-FSGELPIELAGLPNLQVIALQENKLSGNV 526 (1099)
Q Consensus 448 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~-l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 526 (1099)
|+++...+..|..+++|+.|+|++|+++...+..|.++++|++|++++|+ +....+..|.++++|+.|+|++|+++
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~--- 198 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR--- 198 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS---
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc---
Confidence 77665555566666666666666666665555566666666666666632 33222233444444444444444444
Q ss_pred chhhhcccccceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccC
Q 047739 527 PEGFSSLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLS 606 (1099)
Q Consensus 527 p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 606 (1099)
.+| .+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..+..|..++
T Consensus 199 ----------------------~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 255 (440)
T 3zyj_A 199 ----------------------EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQ 255 (440)
T ss_dssp ----------------------SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCT
T ss_pred ----------------------ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCC
Confidence 122 244455556666666666655566666666777777777777666666667777
Q ss_pred cccEEeccCccccccCCcccCCCCCCCEEECcCcccc
Q 047739 607 HLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLS 643 (1099)
Q Consensus 607 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 643 (1099)
+|+.|+|++|++++..+..+..+++|+.|+|++|++.
T Consensus 256 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 256 SLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp TCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred CCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 7777777777777555555666777777777777764
No 318
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=1.8e-26 Score=279.65 Aligned_cols=266 Identities=27% Similarity=0.340 Sum_probs=155.5
Q ss_pred CCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcc
Q 047739 343 RLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLR 422 (1099)
Q Consensus 343 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 422 (1099)
+++.|++++|.++ .+|..+. ++|++|+|++|+|+ .+|. .+++|++|+|++|+|+++ |. .+++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~l-p~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTSL-PV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSCC-CC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCcC-CC---CCCCCCEEECc
Confidence 5777888888777 5565554 67777777777777 4554 356666666666666642 32 45666666666
Q ss_pred cCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccC
Q 047739 423 HNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGEL 502 (1099)
Q Consensus 423 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 502 (1099)
+|++++ +|. .+.+|+.|++++|++++ +|.. +++|+.|+|++|++++ +|. .+.+|+.|++++|
T Consensus 110 ~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N------ 171 (622)
T 3g06_A 110 SNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNN------ 171 (622)
T ss_dssp SCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSS------
T ss_pred CCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCC------
Confidence 666663 333 34556666666666553 3322 2455555555555552 222 1234444445444
Q ss_pred CcccCCCCccceeeeccccccCCCchhhhcccccceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCC
Q 047739 503 PIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCS 582 (1099)
Q Consensus 503 ~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~ 582 (1099)
++++ +| ..+++|+.|++++|.+++ +|.. +++|+.|++++|+++ .+|.. ++
T Consensus 172 ------------------~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~-~l~~~---~~ 221 (622)
T 3g06_A 172 ------------------QLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PS 221 (622)
T ss_dssp ------------------CCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-SCCCC---CT
T ss_pred ------------------CCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc-ccCCC---CC
Confidence 4442 22 223455555555555553 2221 245566666666665 34432 35
Q ss_pred CCceEEecCCcccCcCCcchhccCcccEEeccCccccccCCcccCCCCCCCEEECcCccccccCChhhhccCCCCeeecC
Q 047739 583 DLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLS 662 (1099)
Q Consensus 583 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls 662 (1099)
+|+.|+|++|++++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+.++++|+.|+|+
T Consensus 222 ~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~ 292 (622)
T 3g06_A 222 GLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 292 (622)
T ss_dssp TCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECC
T ss_pred CCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEec
Confidence 67777777777763 45 34466777777777776 4555 4566777777777777 667777777777777777
Q ss_pred CCcCCCcCCCCccc
Q 047739 663 ANNLSGEIPANLSS 676 (1099)
Q Consensus 663 ~N~l~~~~p~~~~~ 676 (1099)
+|++++.+|..+..
T Consensus 293 ~N~l~~~~~~~l~~ 306 (622)
T 3g06_A 293 GNPLSERTLQALRE 306 (622)
T ss_dssp SCCCCHHHHHHHHH
T ss_pred CCCCCCcCHHHHHh
Confidence 77777766665444
No 319
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=6.9e-28 Score=270.84 Aligned_cols=267 Identities=21% Similarity=0.235 Sum_probs=140.9
Q ss_pred eeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccC
Q 047739 296 LQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEG 375 (1099)
Q Consensus 296 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~ 375 (1099)
++.++++.+.+...++..+..+++|++|+|++|+|++..|..|+++++|++|+|++|.+++..+ +..+++|++|+|++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 4445555555554444444444555555555555555445555555555555555555543322 44444444444444
Q ss_pred CcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccC
Q 047739 376 NRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVP 455 (1099)
Q Consensus 376 N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 455 (1099)
|+++ +.. ..++|++|++++|++++..+. .+++|++|++++|++++..+
T Consensus 90 n~l~------------------------~l~-----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~ 137 (317)
T 3o53_A 90 NYVQ------------------------ELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRD 137 (317)
T ss_dssp SEEE------------------------EEE-----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGG
T ss_pred Cccc------------------------ccc-----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccc
Confidence 4443 211 114455555555555433222 13445555555555554444
Q ss_pred cccCCCCcccEEEccCCcCCCcCCCCC-CCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhccc
Q 047739 456 ASIGNLSQLMVFNLSGNAFSGRIPASL-GNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLM 534 (1099)
Q Consensus 456 ~~l~~l~~L~~L~L~~N~l~~~~~~~l-~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 534 (1099)
..+..+++|+.|+|++|.+++..+..+ ..+++|++|++++|.+++. +. ...++
T Consensus 138 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-------------------------~~-~~~l~ 191 (317)
T 3o53_A 138 LDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-------------------------KG-QVVFA 191 (317)
T ss_dssp BCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-------------------------EC-CCCCT
T ss_pred hhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-------------------------cc-ccccc
Confidence 444444455555555554444333333 2344444444444444422 11 11245
Q ss_pred ccceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCccc-CcCCcchhccCcccEEec
Q 047739 535 SLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLT-GHIPTDISHLSHLNVLDL 613 (1099)
Q Consensus 535 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L 613 (1099)
+|++|++++|++++. |..+..+++|+.|++++|+++ .+|..+..+++|+.|+|++|.++ +.+|..+..+++|+.|++
T Consensus 192 ~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l 269 (317)
T 3o53_A 192 KLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAK 269 (317)
T ss_dssp TCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHH
T ss_pred cCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEEC
Confidence 555555555555532 223555555666666666665 45667777888888888888887 667778888888888888
Q ss_pred cC-ccccccCCc
Q 047739 614 SI-NNLTGEIPD 624 (1099)
Q Consensus 614 s~-N~l~~~~p~ 624 (1099)
++ +.++|..|.
T Consensus 270 ~~~~~l~~~~~~ 281 (317)
T 3o53_A 270 QTVKKLTGQNEE 281 (317)
T ss_dssp HHHHHHHSSSSC
T ss_pred CCchhccCCchh
Confidence 84 456665444
No 320
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=4.5e-30 Score=315.76 Aligned_cols=186 Identities=16% Similarity=0.201 Sum_probs=116.8
Q ss_pred CCcccceEecCCcEeEEecCCCccccccc-cccccccccceEEccCCccCcc---cCc------------ccccCCcccE
Q 047739 55 PCDWRGVACTNNRVTELRLPRLQLSGRIS-DHLSNLRMLRKLSLRSNSFNGT---IPA------------TLAQCTLLRA 118 (1099)
Q Consensus 55 ~c~w~gv~c~~~~v~~l~l~~~~l~g~~~-~~l~~l~~L~~L~L~~n~~~~~---~p~------------~~~~l~~L~~ 118 (1099)
|++|.++... ....+++.... +..+ ..+..++.|+.|+|+++..... .|. ....+++|++
T Consensus 34 ck~W~~~~~~--~~~~l~~~~~~--~~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~ 109 (594)
T 2p1m_B 34 CKSWYEIERW--CRRKVFIGNCY--AVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEE 109 (594)
T ss_dssp CHHHHHHHHH--HCCEEEESSTT--SSCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCE
T ss_pred HHHHHHhhhh--hceEEeecccc--ccCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCe
Confidence 5589999322 23455554322 2222 3467889999999999864322 222 2346889999
Q ss_pred EEeccccCCCccCcccc-cCCCCceeecccc-cCCCc-ccCCc--ccccceeeCCCCccCCCCCCCC----ccccccccc
Q 047739 119 VFLQYNSLSGNLPANIG-NLSNLEILNVAAN-RLSGE-IANDL--PRNLKYFDLSSNGFSGPIPTSI----SNLSQLQLI 189 (1099)
Q Consensus 119 L~l~~n~l~g~~p~~~~-~l~~L~~L~ls~N-~l~~~-i~~~~--~~~L~~L~ls~N~l~~~~p~~~----~~l~~L~~L 189 (1099)
|+|++|.+++..+..+. .+++|++|+|++| .+++. ++... .++|++|+|++|.+++..+.++ ..+++|+.|
T Consensus 110 L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L 189 (594)
T 2p1m_B 110 IRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSL 189 (594)
T ss_dssp EEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEE
T ss_pred EEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEE
Confidence 99999999888777775 7889999999888 55432 22222 2678888888887765443333 355677777
Q ss_pred cccccccccccccccccccCccccccCceeEEEccCC-cCCccChhhhcCCCCccEEEcccc
Q 047739 190 NFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGN-ALGGVIPPAIGALPKLQVVSLAQN 250 (1099)
Q Consensus 190 ~ls~N~l~~~~~~~~~g~lp~~l~~l~~L~~L~l~~N-~l~~~~p~~~~~l~~L~~L~Ls~N 250 (1099)
++++|. ..... ..++.-+..+++|++|++++| .+++ ++..+..+++|++|+++.+
T Consensus 190 ~l~~~~-~~~~~----~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~ 245 (594)
T 2p1m_B 190 NISCLA-SEVSF----SALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGY 245 (594)
T ss_dssp ECTTCC-SCCCH----HHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBC
T ss_pred EecccC-CcCCH----HHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccc
Confidence 777775 11111 112222344677777777777 3433 6666777777777776544
No 321
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=1.3e-26 Score=275.64 Aligned_cols=237 Identities=20% Similarity=0.193 Sum_probs=190.2
Q ss_pred CCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEE
Q 047739 388 DIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVF 467 (1099)
Q Consensus 388 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L 467 (1099)
.+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..| +..+++|++|+|++|.+++..+ .++|+.|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 34489999999999999999999999999999999999997666 8999999999999999985443 3899999
Q ss_pred EccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhh-cccccceeccccccc
Q 047739 468 NLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFS-SLMSLRYLNLSFNGF 546 (1099)
Q Consensus 468 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l 546 (1099)
++++|.+++..+.. +++|+.|++++|.+++..|..++.+++|+.|+|++|.+++..|..+. .+++|++|+|++|.+
T Consensus 105 ~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 105 HAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp ECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred ECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 99999999766543 46677788877777766666666666666666666666655555554 455555555555555
Q ss_pred CCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccCcccEEeccCccccccCCccc
Q 047739 547 VGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEI 626 (1099)
Q Consensus 547 ~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l 626 (1099)
+ +. |. +..+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.+++ +|..+
T Consensus 182 ~------------------------~~-~~-~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l 233 (487)
T 3oja_A 182 Y------------------------DV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKAL 233 (487)
T ss_dssp C------------------------EE-EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTC
T ss_pred c------------------------cc-cc-cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhh
Confidence 4 22 21 2347889999999999985 56668999999999999999994 88889
Q ss_pred CCCCCCCEEECcCcccc-ccCChhhhccCCCCeeecC
Q 047739 627 SKCSSLRSLLVNSNHLS-GGIPDSLAKLSNLAVLDLS 662 (1099)
Q Consensus 627 ~~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~ls 662 (1099)
..+++|+.|++++|++. +.+|..+..++.|+.++++
T Consensus 234 ~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 234 RFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred ccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 99999999999999998 7788889999999888886
No 322
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=1.5e-28 Score=302.30 Aligned_cols=87 Identities=23% Similarity=0.298 Sum_probs=41.0
Q ss_pred CCCCCceEEecCCcccCcCCcchhc-cCcccEEeccCccccccCCccc-CCCCCCCEEECcCccccccCCh-hhhccCCC
Q 047739 580 NCSDLEVLELRSNSLTGHIPTDISH-LSHLNVLDLSINNLTGEIPDEI-SKCSSLRSLLVNSNHLSGGIPD-SLAKLSNL 656 (1099)
Q Consensus 580 ~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~l-~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L 656 (1099)
.+++|+.|+|++ .+++..+..++. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|++++..+. .+..+++|
T Consensus 430 ~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L 508 (594)
T 2p1m_B 430 HCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETM 508 (594)
T ss_dssp HCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGS
T ss_pred hCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCC
Confidence 344555555544 444333333333 4555555555555544333322 3355555555555555432222 22335555
Q ss_pred CeeecCCCcCC
Q 047739 657 AVLDLSANNLS 667 (1099)
Q Consensus 657 ~~L~ls~N~l~ 667 (1099)
+.|++++|+++
T Consensus 509 ~~L~l~~~~~~ 519 (594)
T 2p1m_B 509 RSLWMSSCSVS 519 (594)
T ss_dssp SEEEEESSCCB
T ss_pred CEEeeeCCCCC
Confidence 55555555553
No 323
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.92 E-value=6.2e-27 Score=282.09 Aligned_cols=183 Identities=19% Similarity=0.099 Sum_probs=124.0
Q ss_pred ccccccceeEEEEE-ECCceEEEEEECCCCC-----------ccHHHHHHHHHHhhhc-cCCcceEEeeEEecCCCceEE
Q 047739 810 VLSRTRYGLVFKAC-YNDGMVLSIRRLPDGS-----------LDENLFRKEAEFLGKV-RHRNLTVLRGYYAGAPDLRLL 876 (1099)
Q Consensus 810 ~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~-----------~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~l 876 (1099)
..+.|++|.+..++ +--|+.+++|.+.... ...++|.+|+++|+++ .|+||+++++++.++ ...||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~-~~~yL 319 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENA-QSGWL 319 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECS-SEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEEC-CEEEE
Confidence 34555665555443 2236778888884321 1225699999999999 699999999999854 55699
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCC
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIP 956 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 956 (1099)
||||++||+|.+++.+.+ .++.. +|+.||++||+|+|+.|||||||||+|||++.++.+||+|||+|+....
T Consensus 320 VMEyv~G~~L~d~i~~~~-----~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAAGE-----EIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp EEECCCSEEHHHHHHTTC-----CCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred EEecCCCCcHHHHHHhCC-----CCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 999999999999998532 34443 5889999999999999999999999999999999999999999986522
Q ss_pred CCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCC
Q 047739 957 TPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKR 1005 (1099)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~ 1005 (1099)
........+||+.|||||++.+ .+..++|+||+|++.+++.++..
T Consensus 392 ---~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~ 436 (569)
T 4azs_A 392 ---DCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWS 436 (569)
T ss_dssp -----CCSHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred ---CCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccc
Confidence 2234456789999999999875 46778999999999887755543
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=3e-24 Score=236.23 Aligned_cols=208 Identities=24% Similarity=0.245 Sum_probs=148.3
Q ss_pred cccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhcccccceeccc
Q 047739 463 QLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLS 542 (1099)
Q Consensus 463 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 542 (1099)
+|+.|++++|++++..+..|.++++|++|++++|++++..+..+..+++|+.|+|++|.+++..+..|..+++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 45555555555554444455555555555555555555555555566666666666666665555666666777777777
Q ss_pred ccccCCCCCCcccccceeeEEEccCCcCCCC-CCCCCCCCCCCceEEecCCcccCcCCcchhccCccc----EEeccCcc
Q 047739 543 FNGFVGQIPATFSFLRSVVVLSFSGNHISGS-IPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLN----VLDLSINN 617 (1099)
Q Consensus 543 ~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~----~L~Ls~N~ 617 (1099)
+|.+.+..+..+..+++|++|++++|++++. +|..++++++|++|+|++|++++..+..+..+.+|+ .|++++|+
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 7777666565677777777777777777753 577888888999999999999876667787777777 89999999
Q ss_pred ccccCCcccCCCCCCCEEECcCccccccCChhhhccCCCCeeecCCCcCCCcCC
Q 047739 618 LTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLSGEIP 671 (1099)
Q Consensus 618 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p 671 (1099)
+++ +|.......+|+.|+|++|++++..+..+.++++|+.|++++|++++..|
T Consensus 189 l~~-~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 189 MNF-IQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CCE-ECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred ccc-cCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 985 44444555689999999999987666678889999999999999987654
No 325
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=1.2e-23 Score=231.32 Aligned_cols=221 Identities=21% Similarity=0.229 Sum_probs=130.2
Q ss_pred EEccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcC
Q 047739 371 LDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKF 450 (1099)
Q Consensus 371 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 450 (1099)
.+.++..++ .+|..+. ++|++|++++|.+++..+..|.++++|++|+|++|++++..+..+.++++|++|+|++|.+
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 88 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (276)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCcc
Confidence 444444444 4444433 3566666666666655555666666666666666666655555666666666666666666
Q ss_pred ccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCccc-CCcccCCCCccceeeeccccccCCCchh
Q 047739 451 SGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGE-LPIELAGLPNLQVIALQENKLSGNVPEG 529 (1099)
Q Consensus 451 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~L~~N~l~~~~p~~ 529 (1099)
++..+..|.++++|+.|++++|++++..+..+.++++|++|++++|++++. +|..+..+++|+.|++++|++++..+..
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 168 (276)
T 2z62_A 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 168 (276)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred CccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHH
Confidence 666666666666677777766666655555666677777777777776643 4666666777777777777776665666
Q ss_pred hhcccccc----eecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCccc
Q 047739 530 FSSLMSLR----YLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLT 595 (1099)
Q Consensus 530 ~~~l~~L~----~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 595 (1099)
|..+.+|+ .|++++|.+++..+..+.. .+|+.|++++|++++..+..+..+++|++|+|++|.++
T Consensus 169 ~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 237 (276)
T 2z62_A 169 LRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 237 (276)
T ss_dssp GHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBC
T ss_pred hhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCccc
Confidence 66666665 5555666555433333322 24555555555554333333444444555555544444
No 326
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.90 E-value=7.2e-23 Score=224.27 Aligned_cols=202 Identities=19% Similarity=0.240 Sum_probs=127.4
Q ss_pred ceeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEcc
Q 047739 295 VLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLE 374 (1099)
Q Consensus 295 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls 374 (1099)
..+.+++++++++. +|..+. ++|++|+|++|+|++..+..|+++++|++|+|++|.++...+..|..+++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 35667777777774 444333 467777777777776655667777777777777777775555556667777777777
Q ss_pred CCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCcccc
Q 047739 375 GNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEV 454 (1099)
Q Consensus 375 ~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 454 (1099)
+|++++..+..|..+++|++|++++|.+++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|.+++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 77776555555666666666666666666666666666666666666666666544444556666666666666666555
Q ss_pred CcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCc
Q 047739 455 PASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFS 499 (1099)
Q Consensus 455 ~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~ 499 (1099)
+..|.++++|+.|+|++|++++..+..|..+++|+.|++++|.+.
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 555555666666666666665444444555555555555555544
No 327
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=1e-23 Score=231.20 Aligned_cols=225 Identities=22% Similarity=0.261 Sum_probs=127.8
Q ss_pred eeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccC
Q 047739 296 LQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEG 375 (1099)
Q Consensus 296 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~ 375 (1099)
+..+++..+.+.... .+..+++|+.|++++|.++. + ..+..+++|++|+|++|.+++. ..+..+++|++|+|++
T Consensus 21 l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~ 94 (272)
T 3rfs_A 21 TIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTG 94 (272)
T ss_dssp HHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTT
T ss_pred HHHHHhcCccccccc--ccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCC
Confidence 344455555554332 24455666666666666652 2 2456666666666666666542 3556666666666666
Q ss_pred CcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccC
Q 047739 376 NRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVP 455 (1099)
Q Consensus 376 N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 455 (1099)
|++++..+..+..+++|++|++++|++++..+..|.++++|++|+|++|++++..+..+..+++|+.|++++|++++..+
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 174 (272)
T 3rfs_A 95 NQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPE 174 (272)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCH
Confidence 66665555555666666666666666665555556666666666666666665444445556666666666666655555
Q ss_pred cccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhcc
Q 047739 456 ASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSL 533 (1099)
Q Consensus 456 ~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 533 (1099)
..++.+++|+.|++++|++++..+..+.++++|++|++++|.+.+. +++|+.|+++.|.++|.+|..++.+
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 175 GVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCB
T ss_pred HHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCccccc
Confidence 5555555666666666665555555555555555555555554422 3344555555555555555444443
No 328
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=1.8e-23 Score=229.20 Aligned_cols=228 Identities=20% Similarity=0.256 Sum_probs=187.4
Q ss_pred CCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeec
Q 047739 318 STLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTL 397 (1099)
Q Consensus 318 ~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 397 (1099)
.++..+++..+.+.+. ..+..+.+|+.|++++|.++. ...+..+++|++|+|++|++++ + ..+..+++|++|++
T Consensus 19 ~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~--~~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L 92 (272)
T 3rfs_A 19 AETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS--VQGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLIL 92 (272)
T ss_dssp HHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC--CTTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEEC
T ss_pred HHHHHHHhcCcccccc--cccccccceeeeeeCCCCccc--ccccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEEC
Confidence 3566778888887644 345678899999999999874 3458889999999999999985 3 47888999999999
Q ss_pred cCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCCCc
Q 047739 398 AANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGR 477 (1099)
Q Consensus 398 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 477 (1099)
++|.+++..+..|.++++|++|+|++|++++..+..+..+++|++|++++|.+++..+..+..+++|+.|++++|++++.
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 172 (272)
T 3rfs_A 93 TGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSL 172 (272)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCcc
Confidence 99999988888889999999999999999877777788889999999999999877777788888899999999988877
Q ss_pred CCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhcccccceecccccccCCCCCCccccc
Q 047739 478 IPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATFSFL 557 (1099)
Q Consensus 478 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l 557 (1099)
.+..+.++++|++|++++|++++..+..+..+++|+.|++++|.+.+. +++|++|+++.|.++|.+|..++.+
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 173 PEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCB
T ss_pred CHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCccccc
Confidence 777788888888888888888877777788888888888888887643 4467788888888888877777655
Q ss_pred c
Q 047739 558 R 558 (1099)
Q Consensus 558 ~ 558 (1099)
.
T Consensus 246 ~ 246 (272)
T 3rfs_A 246 A 246 (272)
T ss_dssp C
T ss_pred C
Confidence 4
No 329
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.90 E-value=1.5e-22 Score=221.66 Aligned_cols=203 Identities=21% Similarity=0.290 Sum_probs=156.9
Q ss_pred CccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeecc
Q 047739 319 TLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLA 398 (1099)
Q Consensus 319 ~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 398 (1099)
+.+.+++++|.++ .+|..+. .+|++|+|++|++++..+..|.++++|++|+|++|+++...+..|..+++|++|+++
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 5778999999888 4665554 578888888888887777788888888888888888886555667778888888888
Q ss_pred CccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCCCcC
Q 047739 399 ANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRI 478 (1099)
Q Consensus 399 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 478 (1099)
+|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..|..+++|+.|+|++|++++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 88888777777788888888888888888766677777888888888888887666666777788888888888777666
Q ss_pred CCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccC
Q 047739 479 PASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSG 524 (1099)
Q Consensus 479 ~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 524 (1099)
+..|.++++|++|++++|++++..+..+..+++|+.|+|++|.+..
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 6667777777777777777776555566777777777777777653
No 330
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=1.6e-24 Score=248.21 Aligned_cols=255 Identities=19% Similarity=0.225 Sum_probs=186.9
Q ss_pred EEEcCCCccccCcchhccCCCCccEEeCCCCccccCch----hhhCCCC-CCCEEEccCCccCccCCccccCC-----CC
Q 047739 298 VLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIP----AQIGGLW-RLEELKMANNSFGGAVPVEIKQC-----SS 367 (1099)
Q Consensus 298 ~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p----~~~~~l~-~L~~L~L~~n~l~~~~~~~l~~l-----~~ 367 (1099)
.++|+.|.+++.+|..+...++|++|||++|.|++..+ ..|.+++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35788888888888877777779999999999887766 7778888 89999999999887777776664 88
Q ss_pred CCEEEccCCcCCCCCCcccc----CC-CCCCeeeccCccccccCCcc----CCC-CCCCCEEEcccCcCccccc----hh
Q 047739 368 LSLLDLEGNRFSGEIPEFLG----DI-RGLKSLTLAANLFSGSIPAS----FRN-LPGLENLNLRHNSLSGSLP----EE 433 (1099)
Q Consensus 368 L~~L~Ls~N~l~~~~p~~~~----~l-~~L~~L~L~~n~l~~~~~~~----~~~-l~~L~~L~L~~N~l~~~~~----~~ 433 (1099)
|++|+|++|++++..+..+. .+ ++|++|+|++|++++..+.. +.. .++|++|+|++|++++... ..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 99999999998876666443 34 78888888888888766544 334 3588889998888885443 34
Q ss_pred hhCCC-CCCEEEccCCcCccccCccc----CCC-CcccEEEccCCcCCCc----CCCCCCC-CCCCCEEEeccCcCcccC
Q 047739 434 VLGMN-NLSTLDLSENKFSGEVPASI----GNL-SQLMVFNLSGNAFSGR----IPASLGN-LLKLTTLDLSKQNFSGEL 502 (1099)
Q Consensus 434 ~~~l~-~L~~L~Ls~N~l~~~~~~~l----~~l-~~L~~L~L~~N~l~~~----~~~~l~~-l~~L~~L~L~~n~l~~~~ 502 (1099)
+..++ +|++|+|++|++++..+..+ ..+ ++|+.|+|++|.+++. ++..+.. .++|++|+|++|.+++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 45555 88888888888876665443 344 5888888888888853 3334444 358888888888887654
Q ss_pred C----cccCCCCccceeeeccccccCCCch-------hhhcccccceecccccccCCCCCC
Q 047739 503 P----IELAGLPNLQVIALQENKLSGNVPE-------GFSSLMSLRYLNLSFNGFVGQIPA 552 (1099)
Q Consensus 503 ~----~~l~~l~~L~~L~L~~N~l~~~~p~-------~~~~l~~L~~L~Ls~N~l~~~~~~ 552 (1099)
+ ..+..+++|+.|+|++|.+.+..+. .+..+++|++||+++|.+.+..+.
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~ 302 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSI 302 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCH
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchH
Confidence 4 3356678888888888886544333 455667788888888887655443
No 331
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.89 E-value=4.2e-24 Score=256.02 Aligned_cols=186 Identities=14% Similarity=0.195 Sum_probs=140.5
Q ss_pred ccccccccccceeEEEEEECCceEEEEEECCCCCcc---------HHHHHHHHHHhhhccCCcceEEeeEEecCCCceEE
Q 047739 806 DEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLD---------ENLFRKEAEFLGKVRHRNLTVLRGYYAGAPDLRLL 876 (1099)
Q Consensus 806 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~---------~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 876 (1099)
...++||+|+||.||+|.+. +..+++|+....... .+.+.+|++++++++||||+++..++..... .|+
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~-~~l 416 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDN-KRI 416 (540)
T ss_dssp ---------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTT-TEE
T ss_pred CCCCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCc-cEE
Confidence 44678999999999999655 566777765332211 2458999999999999999955555554333 499
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCCcEEEeccccccccCC
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIP 956 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 956 (1099)
||||+++|+|.++++. +..++.|+++||+|||+.+|+||||||+||+++. .+||+|||+|+....
T Consensus 417 VmE~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 417 MMSYINGKLAKDVIED-------------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EEECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EEECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 9999999999999974 4578999999999999999999999999999999 999999999987522
Q ss_pred CCCCC----ccccccccCccccCcccccc--CCCCCcCchhhHHHHHHHHHhCCCCCC
Q 047739 957 TPAEA----STSTTAVGTLGYVSPEAALT--GETTKESDVYSFGIVLLELLTGKRPVM 1008 (1099)
Q Consensus 957 ~~~~~----~~~~~~~gt~~y~aPE~~~~--~~~~~~~DV~S~G~il~elltg~~P~~ 1008 (1099)
..... .......||+.|||||++.. ..|+..+|+|+..+-..+.+.++.+|.
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 11000 01235689999999999976 567888999999999888888877763
No 332
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=2.2e-22 Score=222.39 Aligned_cols=177 Identities=21% Similarity=0.199 Sum_probs=105.7
Q ss_pred CccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeecc
Q 047739 319 TLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLA 398 (1099)
Q Consensus 319 ~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 398 (1099)
++++|+|++|.|++..+..|.++++|++|+|++|.+++..+. ..+++|++|+|++|+++ .+|..+..+++|++|+|+
T Consensus 32 ~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~ 108 (290)
T 1p9a_G 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVS 108 (290)
T ss_dssp TCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECC
T ss_pred CCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECC
Confidence 444445555544444444455555555555555555432221 44555555555555555 455555556666666666
Q ss_pred CccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCCCcC
Q 047739 399 ANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRI 478 (1099)
Q Consensus 399 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 478 (1099)
+|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|+++...+..|.++++|+.|+|++|+++ .+
T Consensus 109 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~i 187 (290)
T 1p9a_G 109 FNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TI 187 (290)
T ss_dssp SSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CC
T ss_pred CCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-cc
Confidence 66666555566666666666666666666555555566666666666666666555555666677777777777776 55
Q ss_pred CCCCCCCCCCCEEEeccCcCc
Q 047739 479 PASLGNLLKLTTLDLSKQNFS 499 (1099)
Q Consensus 479 ~~~l~~l~~L~~L~L~~n~l~ 499 (1099)
|..+..+.+|+.|+|++|.+.
T Consensus 188 p~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 188 PKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CTTTTTTCCCSEEECCSCCBC
T ss_pred ChhhcccccCCeEEeCCCCcc
Confidence 666666667777777777665
No 333
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=2.7e-22 Score=221.67 Aligned_cols=203 Identities=19% Similarity=0.255 Sum_probs=151.3
Q ss_pred ccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCC
Q 047739 314 LTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLK 393 (1099)
Q Consensus 314 ~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 393 (1099)
+..+++++++++++|.++ .+|..+. +++++|+|++|.+++..+..|..+++|++|+|++|+|++. +.. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcCC
Confidence 456667777777777776 4554443 5678888888888777777777888888888888887743 322 6777788
Q ss_pred eeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCc
Q 047739 394 SLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNA 473 (1099)
Q Consensus 394 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~ 473 (1099)
+|+|++|+++ .+|..+.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 8888888877 456677778888888888888876666777778888888888888877666677778888888888888
Q ss_pred CCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeecccccc
Q 047739 474 FSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLS 523 (1099)
Q Consensus 474 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~ 523 (1099)
++...+..|.++++|+.|+|++|+++ .+|..+..+++|+.|+|++|.+.
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 87655566777788888888888877 56667777777888888888775
No 334
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=1e-24 Score=249.84 Aligned_cols=257 Identities=19% Similarity=0.220 Sum_probs=127.2
Q ss_pred EEccCCccCccCCccccCCCCCCEEEccCCcCCCCCC----ccccCCC-CCCeeeccCccccccCCccCCCC-----CCC
Q 047739 347 LKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIP----EFLGDIR-GLKSLTLAANLFSGSIPASFRNL-----PGL 416 (1099)
Q Consensus 347 L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l-----~~L 416 (1099)
++|++|.+++.+|..+...++|++|||++|++++..+ +.+..++ +|++|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4566666665555555555556666666666654444 4444554 55555555555554444444332 555
Q ss_pred CEEEcccCcCccccchhhhC----C-CCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCCCcCCCCCCC-CCCCCE
Q 047739 417 ENLNLRHNSLSGSLPEEVLG----M-NNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGN-LLKLTT 490 (1099)
Q Consensus 417 ~~L~L~~N~l~~~~~~~~~~----l-~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~-l~~L~~ 490 (1099)
++|+|++|++++..+..+.. + ++|++|+|++|.+++..+..+.. .+.. .++|++
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~--------------------~l~~~~~~L~~ 142 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQ--------------------AFSNLPASITS 142 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH--------------------HHTTSCTTCCE
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHH--------------------HHHhCCCceeE
Confidence 55555555555444433222 2 44555555555554333322211 1112 134555
Q ss_pred EEeccCcCcccCC----cccCCCC-ccceeeeccccccCCCchhhhcc-----cccceecccccccCCC----CCCcccc
Q 047739 491 LDLSKQNFSGELP----IELAGLP-NLQVIALQENKLSGNVPEGFSSL-----MSLRYLNLSFNGFVGQ----IPATFSF 556 (1099)
Q Consensus 491 L~L~~n~l~~~~~----~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~----~~~~l~~ 556 (1099)
|+|++|++++... ..+..++ +|++|+|++|++++..+..+... ++|++|+|++|.+++. ++..+..
T Consensus 143 L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~ 222 (362)
T 3goz_A 143 LNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSS 222 (362)
T ss_dssp EECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHH
T ss_pred EEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhc
Confidence 5555555543222 2223333 55555555555555444433322 3566666666665542 2222322
Q ss_pred -cceeeEEEccCCcCCCCCC----CCCCCCCCCceEEecCCcccCc-------CCcchhccCcccEEeccCccccccCC
Q 047739 557 -LRSVVVLSFSGNHISGSIP----PELGNCSDLEVLELRSNSLTGH-------IPTDISHLSHLNVLDLSINNLTGEIP 623 (1099)
Q Consensus 557 -l~~L~~L~ls~N~l~~~~p----~~l~~l~~L~~L~L~~N~l~~~-------~p~~~~~l~~L~~L~Ls~N~l~~~~p 623 (1099)
.++|+.|++++|++++..+ ..+..+++|++|+|++|.+.+. ++..+..+++|+.||+++|++.+..+
T Consensus 223 ~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 223 IPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp SCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred CCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 2355566666665554322 2345566677777777764422 22344556667777777777665433
No 335
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=2.2e-23 Score=233.37 Aligned_cols=205 Identities=20% Similarity=0.230 Sum_probs=127.1
Q ss_pred cccceeeCCCCccCCCCCCCC--ccccccccccccccccccccccccccccC-ccccccCceeEEEccCCcCCccChhhh
Q 047739 160 RNLKYFDLSSNGFSGPIPTSI--SNLSQLQLINFSFNKFSREVPATFEGTLP-SAIANCSSLVHLSAQGNALGGVIPPAI 236 (1099)
Q Consensus 160 ~~L~~L~ls~N~l~~~~p~~~--~~l~~L~~L~ls~N~l~~~~~~~~~g~lp-~~l~~l~~L~~L~l~~N~l~~~~p~~~ 236 (1099)
++|++|++++|++++.+|..+ +++++|++|+|++|++++..+ .++ ..+..+++|++|+|++|++++..+..|
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~-----~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~ 165 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRS-----WLAELQQWLKPGLKVLSIAQAHSPAFSCEQV 165 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTS-----SHHHHHTTBCSCCCEEEEECCSSCCCCTTSC
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhh-----hhHHHHhhhccCCCEEEeeCCCcchhhHHHh
Confidence 346666667777777777777 888999999999999884322 011 234467889999999999988888888
Q ss_pred cCCCCccEEEcccccCCCc--cCcccccccCCCCCcceEEEeccccccccCCCCCCCCCCceeEEEcCCCccccCcchhc
Q 047739 237 GALPKLQVVSLAQNNLSGV--VPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWL 314 (1099)
Q Consensus 237 ~~l~~L~~L~Ls~N~l~~~--~p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~ 314 (1099)
+.+++|++|+|++|++.+. ++. +..+
T Consensus 166 ~~l~~L~~L~Ls~N~l~~~~~~~~----------------------------------------------------~~~~ 193 (310)
T 4glp_A 166 RAFPALTSLDLSDNPGLGERGLMA----------------------------------------------------ALCP 193 (310)
T ss_dssp CCCTTCCEEECCSCTTCHHHHHHT----------------------------------------------------TSCT
T ss_pred ccCCCCCEEECCCCCCccchhhhH----------------------------------------------------HHhh
Confidence 8899999999999987642 111 0112
Q ss_pred cCCCCccEEeCCCCccccCchh----hhCCCCCCCEEEccCCccCccCCccccCC---CCCCEEEccCCcCCCCCCcccc
Q 047739 315 TRASTLTRLDVSGNSISGKIPA----QIGGLWRLEELKMANNSFGGAVPVEIKQC---SSLSLLDLEGNRFSGEIPEFLG 387 (1099)
Q Consensus 315 ~~l~~L~~L~Ls~N~i~~~~p~----~~~~l~~L~~L~L~~n~l~~~~~~~l~~l---~~L~~L~Ls~N~l~~~~p~~~~ 387 (1099)
..+++|++|+|++|+++. ++. .++++++|++|+|++|++++..|..+..+ ++|++|+|++|+|+ .+|..+.
T Consensus 194 ~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~ 271 (310)
T 4glp_A 194 HKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP 271 (310)
T ss_dssp TSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC
T ss_pred hcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc
Confidence 233445555555555541 221 13445555555555555555445444444 45666666666665 4454443
Q ss_pred CCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCc
Q 047739 388 DIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLS 427 (1099)
Q Consensus 388 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 427 (1099)
++|++|+|++|++++. |. +..+++|+.|+|++|.++
T Consensus 272 --~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 272 --AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp --SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred --CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 5666666666666643 22 456667777777777765
No 336
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=1.3e-22 Score=219.59 Aligned_cols=189 Identities=22% Similarity=0.235 Sum_probs=166.2
Q ss_pred CCcccceEecCCcEeEEecCCCccccccccccccccccceEEccCCccCcccCcccccCCcccEEEeccccCCCccCccc
Q 047739 55 PCDWRGVACTNNRVTELRLPRLQLSGRISDHLSNLRMLRKLSLRSNSFNGTIPATLAQCTLLRAVFLQYNSLSGNLPANI 134 (1099)
Q Consensus 55 ~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~ 134 (1099)
||.|.|++|.. ..+.++++++++. .+|+.+. +.|+.|+|++|++.+..|..++++++|++|+|++|++++..|..+
T Consensus 4 Cp~~~gC~C~~-~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 79 (251)
T 3m19_A 4 CETVTGCTCNE-GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVF 79 (251)
T ss_dssp CHHHHSSEEEG-GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTT
T ss_pred CCCCCceEcCC-CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHh
Confidence 78999999963 2346888888876 5666555 689999999999999888899999999999999999999888889
Q ss_pred ccCCCCceeecccccCCCcccCCcc--cccceeeCCCCccCCCCCCCCccccccccccccccccccccccccccccCccc
Q 047739 135 GNLSNLEILNVAANRLSGEIANDLP--RNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAI 212 (1099)
Q Consensus 135 ~~l~~L~~L~ls~N~l~~~i~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l 212 (1099)
+++++|++|+|++|.+++..+..+. ++|++|+|++|+|++..+..|.++++|++|+|++|+|++. .|..+
T Consensus 80 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--------~~~~~ 151 (251)
T 3m19_A 80 DDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSI--------PAGAF 151 (251)
T ss_dssp TTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC--------CTTTT
T ss_pred ccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCcc--------CHHHc
Confidence 9999999999999999977666554 8999999999999987778899999999999999999832 23357
Q ss_pred cccCceeEEEccCCcCCccChhhhcCCCCccEEEcccccCCCc
Q 047739 213 ANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGV 255 (1099)
Q Consensus 213 ~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 255 (1099)
+.+++|++|+|++|++++..+..|..+++|++|+|++|.+++.
T Consensus 152 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 152 DKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 7889999999999999998888999999999999999999854
No 337
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.88 E-value=8e-24 Score=253.20 Aligned_cols=216 Identities=25% Similarity=0.342 Sum_probs=135.1
Q ss_pred CCCCCCCCCCCCCC-----cccce-EecCCcEeEEecCCCccccccccccccccccceEEccCCccCcccCcccccCCcc
Q 047739 43 ALNGWDSSTPAAPC-----DWRGV-ACTNNRVTELRLPRLQLSGRISDHLSNLRMLRKLSLRSNSFNGTIPATLAQCTLL 116 (1099)
Q Consensus 43 ~l~~w~~~~~~~~c-----~w~gv-~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L 116 (1099)
.+.+|..+ ..|| .|.|+ .|..++++.|+|+++++.+ ||+.+. ++|++|+|++|.++ .+| +.+++|
T Consensus 32 ~l~~W~~~--~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L 102 (571)
T 3cvr_A 32 AWDKWEKQ--ALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASL 102 (571)
T ss_dssp HHHHHHTT--CCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTC
T ss_pred HHHHHhcc--CCccccccchhhhccccccCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCC
Confidence 45678653 3478 79999 8987778888888888877 776653 67788888888777 566 446677
Q ss_pred cEEEeccccCCCccCcccccCCCCceeecccccCCCcccCCcccccceeeCCCCccCCCCCCCCcccccccccccccccc
Q 047739 117 RAVFLQYNSLSGNLPANIGNLSNLEILNVAANRLSGEIANDLPRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKF 196 (1099)
Q Consensus 117 ~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~N~l~~~i~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l 196 (1099)
++|+|++|+|++ ||. +.+ +|++|+|++|.+++ +|. .+++|++|+|++|+|
T Consensus 103 ~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-----------------------lp~---~l~~L~~L~Ls~N~l 152 (571)
T 3cvr_A 103 EYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-----------------------LPE---LPALLEYINADNNQL 152 (571)
T ss_dssp CEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-----------------------CCC---CCTTCCEEECCSSCC
T ss_pred CEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-----------------------CCC---cCccccEEeCCCCcc
Confidence 777777777776 665 443 55555555555554 333 345566666666655
Q ss_pred ccccccccccccCccccccCceeEEEccCCcCCccChhhhcCCCCccEEEcccccCCCccCcccccccCCCCCcceEEEe
Q 047739 197 SREVPATFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQL 276 (1099)
Q Consensus 197 ~~~~~~~~~g~lp~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~l 276 (1099)
+ .+|. .+++|++|+|++|+|++ +|. |. ++|++|+|++|+|+ .+|. |.. ++
T Consensus 153 ~---------~lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~--~~~------~L----- 202 (571)
T 3cvr_A 153 T---------MLPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA--VPV------RN----- 202 (571)
T ss_dssp S---------CCCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC--CC--------------
T ss_pred C---------cCCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh--HHH------hh-----
Confidence 5 2333 34566666666666665 444 44 67777777777776 4443 110 00
Q ss_pred ccccccccCCCCCCCCCCceeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhhhCCC
Q 047739 277 GFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGL 341 (1099)
Q Consensus 277 ~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l 341 (1099)
......|+.|+|++|+|+. +|..+..+++|++|+|++|.+++.+|..|..+
T Consensus 203 -------------~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 203 -------------HHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp ------------------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred -------------hcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 0011234777777777764 55556667777777777777777777666554
No 338
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=1.5e-24 Score=251.17 Aligned_cols=249 Identities=22% Similarity=0.279 Sum_probs=157.6
Q ss_pred CCccCCCCCCCCEEEcccCcCccccchh----hhCCCCCCEEEccCCcC---ccccCcccCCCCcccEEEccCCcCCCcC
Q 047739 406 IPASFRNLPGLENLNLRHNSLSGSLPEE----VLGMNNLSTLDLSENKF---SGEVPASIGNLSQLMVFNLSGNAFSGRI 478 (1099)
Q Consensus 406 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~----~~~l~~L~~L~Ls~N~l---~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 478 (1099)
++..+..+++|++|+|++|++++..+.. +..+++|++|+|++|.+ ++.+|..+. .+
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~-----------------~l 86 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALR-----------------LL 86 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHH-----------------HH
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHH-----------------HH
Confidence 4445555666666666666666443322 44556666666666432 233333220 00
Q ss_pred CCCCCCCCCCCEEEeccCcCcc----cCCcccCCCCccceeeeccccccCCCchhh----hcc---------cccceecc
Q 047739 479 PASLGNLLKLTTLDLSKQNFSG----ELPIELAGLPNLQVIALQENKLSGNVPEGF----SSL---------MSLRYLNL 541 (1099)
Q Consensus 479 ~~~l~~l~~L~~L~L~~n~l~~----~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~----~~l---------~~L~~L~L 541 (1099)
...+..+++|++|+|++|.+++ .++..+..+++|+.|+|++|.+++..+..+ ..+ ++|++|++
T Consensus 87 ~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L 166 (386)
T 2ca6_A 87 LQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIIC 166 (386)
T ss_dssp HHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEC
T ss_pred HHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEEC
Confidence 0112344555555555555543 244445555555555555555543322222 222 67777777
Q ss_pred cccccC-CCCC---CcccccceeeEEEccCCcCC--C---CCCCCCCCCCCCceEEecCCccc----CcCCcchhccCcc
Q 047739 542 SFNGFV-GQIP---ATFSFLRSVVVLSFSGNHIS--G---SIPPELGNCSDLEVLELRSNSLT----GHIPTDISHLSHL 608 (1099)
Q Consensus 542 s~N~l~-~~~~---~~l~~l~~L~~L~ls~N~l~--~---~~p~~l~~l~~L~~L~L~~N~l~----~~~p~~~~~l~~L 608 (1099)
++|+++ +.++ ..+..+++|+.|++++|+++ + ..|..+..+++|++|+|++|.++ +.+|..+..+++|
T Consensus 167 ~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L 246 (386)
T 2ca6_A 167 GRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNL 246 (386)
T ss_dssp CSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTC
T ss_pred CCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCc
Confidence 777775 2333 34556677777777777776 2 34447788888999999999985 4677788888999
Q ss_pred cEEeccCcccccc----CCccc--CCCCCCCEEECcCccccc----cCChhh-hccCCCCeeecCCCcCCCcCC
Q 047739 609 NVLDLSINNLTGE----IPDEI--SKCSSLRSLLVNSNHLSG----GIPDSL-AKLSNLAVLDLSANNLSGEIP 671 (1099)
Q Consensus 609 ~~L~Ls~N~l~~~----~p~~l--~~l~~L~~L~Ls~N~l~~----~~p~~l-~~l~~L~~L~ls~N~l~~~~p 671 (1099)
+.|+|++|.+++. +|..+ +.+++|+.|+|++|++++ .+|..+ .++++|+.|++++|++++..|
T Consensus 247 ~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 247 RELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp CEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 9999999998865 56666 448899999999999986 478777 668999999999999986553
No 339
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=1.6e-23 Score=237.56 Aligned_cols=252 Identities=20% Similarity=0.274 Sum_probs=143.3
Q ss_pred eeEEEcCCCccccCcchhccCC--CCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCcc-CCccccCCCCCCEEE
Q 047739 296 LQVLDLQQNQIRGAFPLWLTRA--STLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGA-VPVEIKQCSSLSLLD 372 (1099)
Q Consensus 296 L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~ 372 (1099)
++.+++++|.+. +..+..+ ++++.|++++|.+++..+. +..+++|++|+|++|.+++. ++..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 566777776665 3445555 6677777777777655443 44566777777777766654 555666666777777
Q ss_pred ccCCcCCCCCCccccCCCCCCeeeccCc-cccc-cCCccCCCCCCCCEEEcccC-cCccc-cchhhhCCC-CCCEEEccC
Q 047739 373 LEGNRFSGEIPEFLGDIRGLKSLTLAAN-LFSG-SIPASFRNLPGLENLNLRHN-SLSGS-LPEEVLGMN-NLSTLDLSE 447 (1099)
Q Consensus 373 Ls~N~l~~~~p~~~~~l~~L~~L~L~~n-~l~~-~~~~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~-~L~~L~Ls~ 447 (1099)
|++|.+++..+..++.+++|++|++++| .+++ .++..+.++++|++|++++| .+++. ++..+..++ +|++|++++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~ 204 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSG 204 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCS
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCC
Confidence 7777666666666666666666666666 4554 24445556666666666666 66543 455556666 666666666
Q ss_pred C--cCc-cccCcccCCCCcccEEEccCCc-CCCcCCCCCCCCCCCCEEEeccCc-CcccCCcccCCCCccceeeeccccc
Q 047739 448 N--KFS-GEVPASIGNLSQLMVFNLSGNA-FSGRIPASLGNLLKLTTLDLSKQN-FSGELPIELAGLPNLQVIALQENKL 522 (1099)
Q Consensus 448 N--~l~-~~~~~~l~~l~~L~~L~L~~N~-l~~~~~~~l~~l~~L~~L~L~~n~-l~~~~~~~l~~l~~L~~L~L~~N~l 522 (1099)
| .++ +.++..+.++++|+.|++++|. +++..+..+.++++|++|++++|. +.......+..+++|+.|++++| +
T Consensus 205 ~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i 283 (336)
T 2ast_B 205 YRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-V 283 (336)
T ss_dssp CGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-S
T ss_pred CcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-c
Confidence 6 343 3344455556666666666665 454455555556666666666653 22111123445555555555555 2
Q ss_pred cCCCchhhhcc-cccceecccccccCCCCCCccc
Q 047739 523 SGNVPEGFSSL-MSLRYLNLSFNGFVGQIPATFS 555 (1099)
Q Consensus 523 ~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~~~~l~ 555 (1099)
+.. .+..+ .+|+.|++++|++++..|..++
T Consensus 284 ~~~---~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 284 PDG---TLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp CTT---CHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred CHH---HHHHHHhhCcceEEecccCccccCCccc
Confidence 221 22222 2244444555555544444433
No 340
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=5.9e-24 Score=246.07 Aligned_cols=242 Identities=21% Similarity=0.277 Sum_probs=159.4
Q ss_pred CcchhccCCCCccEEeCCCCccccCch----hhhCCCCCCCEEEccCCc---cCccCCccc-------cCCCCCCEEEcc
Q 047739 309 AFPLWLTRASTLTRLDVSGNSISGKIP----AQIGGLWRLEELKMANNS---FGGAVPVEI-------KQCSSLSLLDLE 374 (1099)
Q Consensus 309 ~~~~~~~~l~~L~~L~Ls~N~i~~~~p----~~~~~l~~L~~L~L~~n~---l~~~~~~~l-------~~l~~L~~L~Ls 374 (1099)
.++..+..+++|++|+|++|.|++..+ ..|..+++|++|+|++|. +++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 455667778888888888888876543 346678888888888853 444455444 577888888888
Q ss_pred CCcCCC----CCCccccCCCCCCeeeccCccccccCCccC----CCC---------CCCCEEEcccCcCc-cccc---hh
Q 047739 375 GNRFSG----EIPEFLGDIRGLKSLTLAANLFSGSIPASF----RNL---------PGLENLNLRHNSLS-GSLP---EE 433 (1099)
Q Consensus 375 ~N~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~----~~l---------~~L~~L~L~~N~l~-~~~~---~~ 433 (1099)
+|++++ .+|..+..+++|++|+|++|.++...+..+ ..+ ++|++|+|++|+++ +.++ ..
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 888876 356667777777777777777764333333 333 77778888887776 3333 35
Q ss_pred hhCCCCCCEEEccCCcCcc-----ccCcccCCCCcccEEEccCCcCC----CcCCCCCCCCCCCCEEEeccCcCccc---
Q 047739 434 VLGMNNLSTLDLSENKFSG-----EVPASIGNLSQLMVFNLSGNAFS----GRIPASLGNLLKLTTLDLSKQNFSGE--- 501 (1099)
Q Consensus 434 ~~~l~~L~~L~Ls~N~l~~-----~~~~~l~~l~~L~~L~L~~N~l~----~~~~~~l~~l~~L~~L~L~~n~l~~~--- 501 (1099)
+..+++|++|+|++|+++. ..+..+..+++|+.|+|++|.++ ..+|..+..+++|++|+|++|.+++.
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 262 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 262 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHH
Confidence 5667777777777777762 33446667777777777777774 34555666677777777777776644
Q ss_pred -CCccc--CCCCccceeeeccccccC----CCchhh-hcccccceecccccccCCCC
Q 047739 502 -LPIEL--AGLPNLQVIALQENKLSG----NVPEGF-SSLMSLRYLNLSFNGFVGQI 550 (1099)
Q Consensus 502 -~~~~l--~~l~~L~~L~L~~N~l~~----~~p~~~-~~l~~L~~L~Ls~N~l~~~~ 550 (1099)
++..+ +.+++|+.|+|++|.+++ .+|..+ .++++|++|++++|.+++..
T Consensus 263 ~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 263 AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 34444 236667777777776665 355555 44566666666666666544
No 341
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.87 E-value=1.4e-22 Score=226.69 Aligned_cols=222 Identities=20% Similarity=0.256 Sum_probs=110.2
Q ss_pred CCCEEEcccCcCccccch---hhhCCCCCCEEEccCCcCccccCccc--CCCCcccEEEccCCcCCCcCC----CCCCCC
Q 047739 415 GLENLNLRHNSLSGSLPE---EVLGMNNLSTLDLSENKFSGEVPASI--GNLSQLMVFNLSGNAFSGRIP----ASLGNL 485 (1099)
Q Consensus 415 ~L~~L~L~~N~l~~~~~~---~~~~l~~L~~L~Ls~N~l~~~~~~~l--~~l~~L~~L~L~~N~l~~~~~----~~l~~l 485 (1099)
.++.+.+.++.++...-. .+..+++|++|++++|.+++..|..+ ..+++|+.|+|++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 355556655555421111 11223456666666666666666655 666666666666666664333 223345
Q ss_pred CCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCC--C--chhhhcccccceecccccccCCCCCC----ccccc
Q 047739 486 LKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGN--V--PEGFSSLMSLRYLNLSFNGFVGQIPA----TFSFL 557 (1099)
Q Consensus 486 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~Ls~N~l~~~~~~----~l~~l 557 (1099)
++|++|++++|++.+..+..+..+++|++|+|++|++.+. + +..+..+++|++|+|++|+++. ++. .+..+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcC
Confidence 6666666666666655555666666666666666655421 1 1112455566666666666541 111 12334
Q ss_pred ceeeEEEccCCcCCCCCCCCCCCC---CCCceEEecCCcccCcCCcchhccCcccEEeccCccccccCCcccCCCCCCCE
Q 047739 558 RSVVVLSFSGNHISGSIPPELGNC---SDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSLRS 634 (1099)
Q Consensus 558 ~~L~~L~ls~N~l~~~~p~~l~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 634 (1099)
++|++|++++|++++..|+.+..+ ++|++|+|++|+++ .+|..+. ++|+.|||++|+|++ +|. +..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~-~~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNR-APQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCS-CCC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCC-Cch-hhhCCCccE
Confidence 444444444444444444444433 34555555555554 3444332 344444444444442 222 333444444
Q ss_pred EECcCccc
Q 047739 635 LLVNSNHL 642 (1099)
Q Consensus 635 L~Ls~N~l 642 (1099)
|+|++|++
T Consensus 299 L~L~~N~l 306 (310)
T 4glp_A 299 LTLDGNPF 306 (310)
T ss_dssp EECSSTTT
T ss_pred EECcCCCC
Confidence 44444444
No 342
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=2.2e-23 Score=236.53 Aligned_cols=254 Identities=20% Similarity=0.248 Sum_probs=180.1
Q ss_pred CCccEEeCCCCccccCchhhhCCC--CCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCC-CCccccCCCCCCe
Q 047739 318 STLTRLDVSGNSISGKIPAQIGGL--WRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGE-IPEFLGDIRGLKS 394 (1099)
Q Consensus 318 ~~L~~L~Ls~N~i~~~~p~~~~~l--~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~ 394 (1099)
..++.+|+++|.+. +..+..+ .+++.|++++|.+.+..+. +..+++|++|+|++|.+++. ++..+..+++|++
T Consensus 47 ~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~ 122 (336)
T 2ast_B 47 SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQN 122 (336)
T ss_dssp TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSE
T ss_pred hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCE
Confidence 35889999999886 5667777 8899999999999876655 55789999999999998765 7778888888999
Q ss_pred eeccCccccccCCccCCCCCCCCEEEcccC-cCccc-cchhhhCCCCCCEEEccCC-cCccc-cCcccCCCC-cccEEEc
Q 047739 395 LTLAANLFSGSIPASFRNLPGLENLNLRHN-SLSGS-LPEEVLGMNNLSTLDLSEN-KFSGE-VPASIGNLS-QLMVFNL 469 (1099)
Q Consensus 395 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~~L~~L~Ls~N-~l~~~-~~~~l~~l~-~L~~L~L 469 (1099)
|+|++|.+++..+..+.++++|++|+|++| .+++. ++..+.++++|++|++++| .+++. ++..+..++ +|+.|+|
T Consensus 123 L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l 202 (336)
T 2ast_B 123 LSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNL 202 (336)
T ss_dssp EECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEEC
T ss_pred EeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEe
Confidence 999998888778888888888889998888 67753 5666778888888888888 88754 466677777 8888888
Q ss_pred cCC--cCC-CcCCCCCCCCCCCCEEEeccCc-CcccCCcccCCCCccceeeecccc-ccCCCchhhhcccccceeccccc
Q 047739 470 SGN--AFS-GRIPASLGNLLKLTTLDLSKQN-FSGELPIELAGLPNLQVIALQENK-LSGNVPEGFSSLMSLRYLNLSFN 544 (1099)
Q Consensus 470 ~~N--~l~-~~~~~~l~~l~~L~~L~L~~n~-l~~~~~~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N 544 (1099)
++| .++ +.++..+.++++|++|++++|. +++..+..+..+++|+.|++++|. +.......+..+++|++|++++|
T Consensus 203 ~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 203 SGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp CSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 888 444 3445556667777777777777 565666667777777777777774 22221224556666777777666
Q ss_pred ccCCCCCCccccc-ceeeEEEccCCcCCCCCCCCCC
Q 047739 545 GFVGQIPATFSFL-RSVVVLSFSGNHISGSIPPELG 579 (1099)
Q Consensus 545 ~l~~~~~~~l~~l-~~L~~L~ls~N~l~~~~p~~l~ 579 (1099)
++. ..+..+ .++..|++++|++++..|..++
T Consensus 283 -i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 283 -VPD---GTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp -SCT---TCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred -cCH---HHHHHHHhhCcceEEecccCccccCCccc
Confidence 221 122222 2244444555555555555444
No 343
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=8e-22 Score=211.77 Aligned_cols=179 Identities=17% Similarity=0.228 Sum_probs=99.4
Q ss_pred CceeEEEcCCCccccCcchhccCCCCccEEeCCCCc-cccCchhhhCCCCCCCEEEccC-CccCccCCccccCCCCCCEE
Q 047739 294 SVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNS-ISGKIPAQIGGLWRLEELKMAN-NSFGGAVPVEIKQCSSLSLL 371 (1099)
Q Consensus 294 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~-i~~~~p~~~~~l~~L~~L~L~~-n~l~~~~~~~l~~l~~L~~L 371 (1099)
+.|++|+|++|+++++.+..|..+++|++|++++|+ +++..+..|.++++|++|+|++ |++++..+..|..+++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 356666666666666555566666666666666665 6655555666666666666666 66665555566666666666
Q ss_pred EccCCcCCCCCCccccCCCCCC---eeeccCc-cccccCCccCCCCCCCC-EEEcccCcCccccchhhhCCCCCCEEEcc
Q 047739 372 DLEGNRFSGEIPEFLGDIRGLK---SLTLAAN-LFSGSIPASFRNLPGLE-NLNLRHNSLSGSLPEEVLGMNNLSTLDLS 446 (1099)
Q Consensus 372 ~Ls~N~l~~~~p~~~~~l~~L~---~L~L~~n-~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 446 (1099)
+|++|++++ +|. +..+++|+ +|++++| .+++..+..|.++++|+ +|++++|+++ .+|.......+|+.|+|+
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~ 187 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLN 187 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcC
Confidence 666666663 444 55555555 5555555 55554444555555555 5555555554 233222222445555555
Q ss_pred CCc-CccccCcccCCC-CcccEEEccCCcCC
Q 047739 447 ENK-FSGEVPASIGNL-SQLMVFNLSGNAFS 475 (1099)
Q Consensus 447 ~N~-l~~~~~~~l~~l-~~L~~L~L~~N~l~ 475 (1099)
+|+ +++..+..|.++ ++|+.|++++|+++
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT 218 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCCC
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCccc
Confidence 552 443334444444 44444444444444
No 344
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=1.6e-21 Score=211.01 Aligned_cols=181 Identities=20% Similarity=0.279 Sum_probs=126.3
Q ss_pred CCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhcccccceecccccccCCCCCCcccccceeeEEEccC
Q 047739 488 LTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSG 567 (1099)
Q Consensus 488 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~ 567 (1099)
.++++++++.++ .+|..+. ++++.|+|++|.+++..+..|..+++|++|+|++|.+++..+..+..+++|++|++++
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 445555555555 3343333 4566666666666655555666666666677776666666666666677777777777
Q ss_pred CcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccCcccEEeccCccccccCCcccCCCCCCCEEECcCccccccCC
Q 047739 568 NHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIP 647 (1099)
Q Consensus 568 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 647 (1099)
|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|+|++|+|++..+..+..+++|+.|+|++|++++..+
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 172 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCH
Confidence 77776666667777788888888888875555556778888888888888876555567788888888888888886666
Q ss_pred hhhhccCCCCeeecCCCcCCCcCC
Q 047739 648 DSLAKLSNLAVLDLSANNLSGEIP 671 (1099)
Q Consensus 648 ~~l~~l~~L~~L~ls~N~l~~~~p 671 (1099)
..+..+++|+.|++++|++++..+
T Consensus 173 ~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 173 GAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp TTTTTCTTCCEEECCSCCBCTTST
T ss_pred HHHhCCCCCCEEEeeCCceeCCcc
Confidence 778888888888888888876533
No 345
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.86 E-value=1.5e-21 Score=209.72 Aligned_cols=197 Identities=15% Similarity=0.195 Sum_probs=133.3
Q ss_pred CCccEEeCCCCccccCchhhhCCCCCCCEEEccCCc-cCccCCccccCCCCCCEEEccC-CcCCCCCCccccCCCCCCee
Q 047739 318 STLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNS-FGGAVPVEIKQCSSLSLLDLEG-NRFSGEIPEFLGDIRGLKSL 395 (1099)
Q Consensus 318 ~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~-l~~~~~~~l~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L 395 (1099)
.+|++|+|++|+|++..+..|+++++|++|++++|+ ++...+..|..+++|++|+|++ |++++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 378888888888887666678888888888888886 7766666788888888888887 88876666677777777777
Q ss_pred eccCccccccCCccCCCCCCCC---EEEcccC-cCccccchhhhCCCCCC-EEEccCCcCccccCcccCCCCcccEEEcc
Q 047739 396 TLAANLFSGSIPASFRNLPGLE---NLNLRHN-SLSGSLPEEVLGMNNLS-TLDLSENKFSGEVPASIGNLSQLMVFNLS 470 (1099)
Q Consensus 396 ~L~~n~l~~~~~~~~~~l~~L~---~L~L~~N-~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~ 470 (1099)
++++|++++ +|. |.++++|+ +|++++| ++++..+..|.++++|+ .|++++|+++...+..+.. ++|+.|+|+
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~ 187 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLN 187 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcC
Confidence 777777775 444 66677776 7777777 67655555566677777 7777777776333333333 566666666
Q ss_pred CCc-CCCcCCCCCCCC-CCCCEEEeccCcCcccCCcccCCCCccceeeeccc
Q 047739 471 GNA-FSGRIPASLGNL-LKLTTLDLSKQNFSGELPIELAGLPNLQVIALQEN 520 (1099)
Q Consensus 471 ~N~-l~~~~~~~l~~l-~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N 520 (1099)
+|+ +++..+..|.++ ++|+.|++++|++++. |.. .+++|+.|+++++
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNT 236 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCceeeccCc
Confidence 663 665445556666 6666666666666532 222 3445555555443
No 346
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=2.3e-21 Score=220.79 Aligned_cols=207 Identities=17% Similarity=0.137 Sum_probs=126.4
Q ss_pred CccccccccccccccccccccccccccccCccccccCceeEEEccCCcCCccChhhhcCCCCccEEEcccccCCCccCcc
Q 047739 180 ISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVVPAS 259 (1099)
Q Consensus 180 ~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 259 (1099)
++.++. +.++.++|+|+ +||..+ .+++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.+|..
T Consensus 6 ~C~C~~-~~v~C~~~~Lt---------~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~ 73 (350)
T 4ay9_X 6 ICHCSN-RVFLCQESKVT---------EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEAD 73 (350)
T ss_dssp SSEEET-TEEEEESTTCC---------SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTT
T ss_pred ccEeeC-CEEEecCCCCC---------ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChh
Confidence 344433 56788888887 566555 357899999999999777788999999999999999987777766
Q ss_pred cccccCCCCCcceEEEeccccccccCCCCCCCCCCceeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhhhC
Q 047739 260 MFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIG 339 (1099)
Q Consensus 260 ~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~ 339 (1099)
.|.++. ..++.+.++.|+|+.+.|..|..+++|++|++++|+|++..+..+.
T Consensus 74 ~f~~L~----------------------------~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~ 125 (350)
T 4ay9_X 74 VFSNLP----------------------------KLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKI 125 (350)
T ss_dssp SBCSCT----------------------------TCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTC
T ss_pred Hhhcch----------------------------hhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhc
Confidence 655421 1233455666777766666677777777777777777655555555
Q ss_pred CCCCCCEEEccC-CccCccCCccccCCC-CCCEEEccCCcCCCCCCccccCCCCCCeeeccC-ccccccCCccCCCCCCC
Q 047739 340 GLWRLEELKMAN-NSFGGAVPVEIKQCS-SLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAA-NLFSGSIPASFRNLPGL 416 (1099)
Q Consensus 340 ~l~~L~~L~L~~-n~l~~~~~~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L 416 (1099)
...++..|++.+ +++....+..|..+. .+++|+|++|+|+ .+|.......+|++|++.+ |.++.+.++.|.++++|
T Consensus 126 ~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L 204 (350)
T 4ay9_X 126 HSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGP 204 (350)
T ss_dssp CBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECC
T ss_pred ccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCccc
Confidence 555666666644 445544444444443 4555666666665 2333322334455555442 33443333444444444
Q ss_pred CEEEcccCcCc
Q 047739 417 ENLNLRHNSLS 427 (1099)
Q Consensus 417 ~~L~L~~N~l~ 427 (1099)
++|+|++|+|+
T Consensus 205 ~~LdLs~N~l~ 215 (350)
T 4ay9_X 205 VILDISRTRIH 215 (350)
T ss_dssp SEEECTTSCCC
T ss_pred chhhcCCCCcC
Confidence 44444444444
No 347
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=6.3e-21 Score=212.83 Aligned_cols=192 Identities=24% Similarity=0.406 Sum_probs=90.4
Q ss_pred CCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCee
Q 047739 316 RASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSL 395 (1099)
Q Consensus 316 ~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 395 (1099)
.+++|++|++++|.++. ++ .+..+++|++|+|++|.+++..+ +..+++|++|+|++|++++ ++ .+..+++|++|
T Consensus 39 ~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L 112 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTL 112 (308)
T ss_dssp HHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEE
T ss_pred HcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEE
Confidence 34455555555555542 23 35555555555555555553322 5555555555555555542 22 34445555555
Q ss_pred eccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCC
Q 047739 396 TLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFS 475 (1099)
Q Consensus 396 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 475 (1099)
++++|++++.. .+.++++|++|++++|++++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|+++
T Consensus 113 ~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~ 186 (308)
T 1h6u_A 113 DLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKIS 186 (308)
T ss_dssp ECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccC
Confidence 55555544321 14455555555555555553222 4455555555555555543222 444445555555555444
Q ss_pred CcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeecccccc
Q 047739 476 GRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLS 523 (1099)
Q Consensus 476 ~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~ 523 (1099)
+..+ +..+++|++|++++|++++.. .+..+++|+.|++++|+++
T Consensus 187 ~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 187 DISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp CCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEE
T ss_pred cChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeee
Confidence 3222 344444444444444444222 1333444444444444443
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=6.5e-21 Score=217.02 Aligned_cols=242 Identities=16% Similarity=0.152 Sum_probs=131.5
Q ss_pred CEEEccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccc-hhhhCCCCCCE-EEcc
Q 047739 369 SLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLP-EEVLGMNNLST-LDLS 446 (1099)
Q Consensus 369 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~-L~Ls 446 (1099)
++++.++++++ .+|..+. +++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.+| ..|.++++++. +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 56777778777 6666552 567777777777776666677777777777777777655444 34566666554 4555
Q ss_pred CCcCccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEecc-CcCcccCCcccCCCCccceeeeccccccCC
Q 047739 447 ENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSK-QNFSGELPIELAGLPNLQVIALQENKLSGN 525 (1099)
Q Consensus 447 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~-n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 525 (1099)
.|+++...|..|.++++|+.|++++|+++...+..+....++..|++.+ +++....+..|..+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~--------------- 153 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS--------------- 153 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSB---------------
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcc---------------
Confidence 6677666666667777777777777776655555555555566666644 344433333333332
Q ss_pred CchhhhcccccceecccccccCCCCCCcccccceeeEEEccC-CcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhc
Q 047739 526 VPEGFSSLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSG-NHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISH 604 (1099)
Q Consensus 526 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~-N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 604 (1099)
..++.|++++|+++.. +.......+|+.|++++ |.++...+..|.++++|++|+|++|+|+ .+|.. .
T Consensus 154 --------~~l~~L~L~~N~i~~i-~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~--~ 221 (350)
T 4ay9_X 154 --------FESVILWLNKNGIQEI-HNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPSY--G 221 (350)
T ss_dssp --------SSCEEEECCSSCCCEE-CTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC-CCCSS--S
T ss_pred --------hhhhhhccccccccCC-ChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC-ccChh--h
Confidence 1244444444444422 22222233455555543 3333222234555555666666666555 33321 1
Q ss_pred cCcccEEeccCccccccCCcccCCCCCCCEEECcCcc
Q 047739 605 LSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNH 641 (1099)
Q Consensus 605 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 641 (1099)
+.+|+.|.+.++.--..+|. +.++++|+.++++++.
T Consensus 222 ~~~L~~L~~l~~~~l~~lP~-l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 222 LENLKKLRARSTYNLKKLPT-LEKLVALMEASLTYPS 257 (350)
T ss_dssp CTTCCEEECTTCTTCCCCCC-TTTCCSCCEEECSCHH
T ss_pred hccchHhhhccCCCcCcCCC-chhCcChhhCcCCCCc
Confidence 22333333332222224443 5556666666665543
No 349
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=1.5e-20 Score=209.85 Aligned_cols=192 Identities=22% Similarity=0.352 Sum_probs=164.1
Q ss_pred CCceeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEE
Q 047739 293 SSVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLD 372 (1099)
Q Consensus 293 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 372 (1099)
+++|++|++++|+++.. + .+..+++|++|+|++|.+++..+ +.++++|++|+|++|.+++. ..+..+++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~ 113 (308)
T 1h6u_A 40 LDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLD 113 (308)
T ss_dssp HHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEE
T ss_pred cCCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEE
Confidence 45688999999998864 4 58889999999999999986544 89999999999999999853 4688899999999
Q ss_pred ccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCcc
Q 047739 373 LEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSG 452 (1099)
Q Consensus 373 Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 452 (1099)
|++|++++ ++. +..+++|++|++++|.+++..+ +.++++|+.|+|++|++++. +. +..+++|+.|++++|.+++
T Consensus 114 l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~ 187 (308)
T 1h6u_A 114 LTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDNKISD 187 (308)
T ss_dssp CTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCCccCc
Confidence 99999985 443 8899999999999999987654 88899999999999999864 33 8899999999999999986
Q ss_pred ccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcc
Q 047739 453 EVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSG 500 (1099)
Q Consensus 453 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 500 (1099)
..+ +..+++|+.|+|++|++++..+ +..+++|+.|++++|++++
T Consensus 188 ~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 188 ISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred Chh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 554 8889999999999999996553 8899999999999999974
No 350
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.84 E-value=1.8e-21 Score=213.50 Aligned_cols=149 Identities=15% Similarity=0.066 Sum_probs=118.8
Q ss_pred HHHHHhccccccccccccceeEEEEEECCceEEEEEECCCCCc-------------------cHHHHHHHHHHhhhccCC
Q 047739 798 TVEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSL-------------------DENLFRKEAEFLGKVRHR 858 (1099)
Q Consensus 798 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~-------------------~~~~~~~E~~~l~~l~H~ 858 (1099)
.......|.+.+.||+|+||.||+|.+.+|+.||+|.+..... ....+.+|++++++++
T Consensus 85 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-- 162 (282)
T 1zar_A 85 LVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-- 162 (282)
T ss_dssp HHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--
T ss_pred HHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--
Confidence 3344556677899999999999999997799999999864321 2456889999999999
Q ss_pred cceEEeeEEecCCCceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEEC
Q 047739 859 NLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFD 938 (1099)
Q Consensus 859 niv~l~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~ 938 (1099)
| +++.+++.. ...++||||+++|+|.+ +.. .....++.|+++||+|||+.||+||||||+||+++
T Consensus 163 ~-~~v~~~~~~--~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~ 227 (282)
T 1zar_A 163 G-LAVPKVYAW--EGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS 227 (282)
T ss_dssp T-SSSCCEEEE--ETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE
T ss_pred C-CCcCeEEec--cceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE
Confidence 4 556565543 23499999999999988 431 12346899999999999999999999999999999
Q ss_pred CCCcEEEeccccccccCCCCCCCccccccccCccccCccccc
Q 047739 939 ADFEAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAAL 980 (1099)
Q Consensus 939 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 980 (1099)
++.+||+|||+|+.. ..|+|||++.
T Consensus 228 -~~~vkl~DFG~a~~~----------------~~~~a~e~l~ 252 (282)
T 1zar_A 228 -EEGIWIIDFPQSVEV----------------GEEGWREILE 252 (282)
T ss_dssp -TTEEEECCCTTCEET----------------TSTTHHHHHH
T ss_pred -CCcEEEEECCCCeEC----------------CCCCHHHHHH
Confidence 999999999998643 3478898764
No 351
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.82 E-value=2.4e-20 Score=223.13 Aligned_cols=188 Identities=27% Similarity=0.432 Sum_probs=103.1
Q ss_pred CCCEEEccCCcCccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeec
Q 047739 439 NLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQ 518 (1099)
Q Consensus 439 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~ 518 (1099)
+|+.|+|++|.+++ +|..+. ++|+.|+|++|+|+ .+| ..+++|++|++++|+|++ +|. +.. +|+.|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 55555555555554 333332 45555555555555 334 234555566666665554 343 333 55555555
Q ss_pred cccccCCCchhhhcccccceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcC
Q 047739 519 ENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHI 598 (1099)
Q Consensus 519 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 598 (1099)
+|++++ +|. .+++|++|++++|.+++ +|. .+++|+.|++++|++++ +|. |. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 555554 333 34556666666666654 333 34556666666666654 444 44 56666666666666 45
Q ss_pred CcchhccCcc-------cEEeccCccccccCCcccCCCCCCCEEECcCccccccCChhhhccC
Q 047739 599 PTDISHLSHL-------NVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLS 654 (1099)
Q Consensus 599 p~~~~~l~~L-------~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 654 (1099)
|. +.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|++++.+|..+..+.
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 54 433 44 66666666666 4666666666666666666666666666665554
No 352
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.82 E-value=1.6e-21 Score=242.33 Aligned_cols=215 Identities=20% Similarity=0.198 Sum_probs=106.2
Q ss_pred hhhHHHHHHHHHhCC-CCCCCCCCCCCCCCCCCCcccceEecCCcEeEEecCCCccccccccccccccccceEEccCCcc
Q 047739 24 SPEIEALTSFKLNLH-DPLGALNGWDSSTPAAPCDWRGVACTNNRVTELRLPRLQLSGRISDHLSNLRMLRKLSLRSNSF 102 (1099)
Q Consensus 24 ~~~~~~l~~~k~~~~-~~~~~l~~w~~~~~~~~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~ 102 (1099)
..++.+|+++..+.. +....-.+|.... ...+.|.+++++..+|++|+|.++++.+. +. ..|+.++|+.|.+
T Consensus 131 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~l~L~~n~~~~~-~~-----~~l~~l~Ls~~~i 203 (727)
T 4b8c_D 131 DCTKQALMEMADTLTDSKTAKKQQPTGDS-TPSGTATNSAVSTPLTPKIELFANGKDEA-NQ-----ALLQHKKLSQYSI 203 (727)
T ss_dssp -CCCHHHHHHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred ccchhhhhhhhhhcccccCcccCCCcCCC-CccccCCCceecCCccceEEeeCCCCCcc-hh-----hHhhcCccCcccc
Confidence 368899999998873 2233445775432 23489999999999999999998887763 32 2345555666555
Q ss_pred Cc---------ccCcccccCCcccEEEeccccCCCccCcccccCCCCceeecccccCCCcccCCcc--cccceeeCCCCc
Q 047739 103 NG---------TIPATLAQCTLLRAVFLQYNSLSGNLPANIGNLSNLEILNVAANRLSGEIANDLP--RNLKYFDLSSNG 171 (1099)
Q Consensus 103 ~~---------~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~N~l~~~i~~~~~--~~L~~L~ls~N~ 171 (1099)
.+ ..|..+..++.|+.|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..+. ++|++|+|++|+
T Consensus 204 ~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~ 281 (727)
T 4b8c_D 204 DEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNR 281 (727)
T ss_dssp ------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSC
T ss_pred cCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCc
Confidence 43 23667888888888888888887 78888888888888888888887 6666554 567777777777
Q ss_pred cCCCCCCCCccccccccccccccccccccccccccccCccccccCceeEEEccCCcCCccChhhhcCCC-CccEEEcccc
Q 047739 172 FSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAIGALP-KLQVVSLAQN 250 (1099)
Q Consensus 172 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~-~L~~L~Ls~N 250 (1099)
|+ .+|..|+++++|++|+|++|.|+ .||..++.+++|++|+|++|.|++.+|..+..+. .+..|+|++|
T Consensus 282 l~-~lp~~~~~l~~L~~L~L~~N~l~---------~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N 351 (727)
T 4b8c_D 282 LT-SLPAELGSCFQLKYFYFFDNMVT---------TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDN 351 (727)
T ss_dssp CS-SCCSSGGGGTTCSEEECCSSCCC---------CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred CC-ccChhhcCCCCCCEEECCCCCCC---------ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccC
Confidence 76 56666777777777777777664 4566666666777777777777666666654432 2223566666
Q ss_pred cCCCccC
Q 047739 251 NLSGVVP 257 (1099)
Q Consensus 251 ~l~~~~p 257 (1099)
.+++.+|
T Consensus 352 ~l~~~~p 358 (727)
T 4b8c_D 352 RPEIPLP 358 (727)
T ss_dssp CCCCCCC
T ss_pred cccCcCc
Confidence 6665443
No 353
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.81 E-value=1.9e-19 Score=188.65 Aligned_cols=159 Identities=22% Similarity=0.230 Sum_probs=71.0
Q ss_pred CCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEcc
Q 047739 391 GLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLS 470 (1099)
Q Consensus 391 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~ 470 (1099)
+|++|++++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|+.|+|+
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 33444444444443333334444444444444444443333333444444444444444443333334444444444444
Q ss_pred CCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhcccccceecccccccCCCC
Q 047739 471 GNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQI 550 (1099)
Q Consensus 471 ~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 550 (1099)
+|++++..+..|.++++|++|++++|++++..+..+..+++|+.|++++|.+.+ .+++|++|+++.|+++|.+
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~i 181 (208)
T 2o6s_A 109 TNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVV 181 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTB
T ss_pred CCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCcee
Confidence 444443333344444444444444444443333334444445555555444432 1234555555555555555
Q ss_pred CCcccc
Q 047739 551 PATFSF 556 (1099)
Q Consensus 551 ~~~l~~ 556 (1099)
|..++.
T Consensus 182 p~~~~~ 187 (208)
T 2o6s_A 182 RNSAGS 187 (208)
T ss_dssp BCTTSS
T ss_pred eccCcc
Confidence 544443
No 354
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.81 E-value=3.1e-19 Score=187.02 Aligned_cols=181 Identities=22% Similarity=0.237 Sum_probs=99.8
Q ss_pred cEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeeccCc
Q 047739 321 TRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAAN 400 (1099)
Q Consensus 321 ~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n 400 (1099)
+.++.+++.++ .+|..+ .++|++|++++|++++..+..+..+++|++|+|++|+++
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~--------------------- 65 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ--------------------- 65 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC---------------------
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccC---------------------
Confidence 45666666665 233322 234555555555555444444455555555555555554
Q ss_pred cccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCCCcCCC
Q 047739 401 LFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPA 480 (1099)
Q Consensus 401 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 480 (1099)
+..+..|.++++|++|+|++|++++..+..+.++++|++|+|++|++++..+..+.++++|+.|+|++|++++..+.
T Consensus 66 ---~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 142 (208)
T 2o6s_A 66 ---SLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDG 142 (208)
T ss_dssp ---CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred ---ccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHH
Confidence 44444445555555555555555544444445555555555555555554444555566666666666666654444
Q ss_pred CCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhcccc
Q 047739 481 SLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMS 535 (1099)
Q Consensus 481 ~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 535 (1099)
.+.++++|++|++++|.+.+ .+++|+.|+++.|++++.+|+.++.++.
T Consensus 143 ~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 143 VFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred HhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 55666666666666665542 3456667777777777777766665543
No 355
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=3.4e-19 Score=189.53 Aligned_cols=158 Identities=22% Similarity=0.302 Sum_probs=119.9
Q ss_pred CCcccceEecCCcEeEEecCCCccccccccccccccccceEEccCCccCcccCcccccCCcccEEEeccccCCCccCccc
Q 047739 55 PCDWRGVACTNNRVTELRLPRLQLSGRISDHLSNLRMLRKLSLRSNSFNGTIPATLAQCTLLRAVFLQYNSLSGNLPANI 134 (1099)
Q Consensus 55 ~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~ 134 (1099)
.|+|++|.|++.+++ .+|..+. +.|++|+|++|++++..|..++.+++|++|+|++|+|++..+..+
T Consensus 18 ~Cs~~~v~c~~~~l~-----------~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~ 84 (229)
T 3e6j_A 18 SCSGTTVDCRSKRHA-----------SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVF 84 (229)
T ss_dssp EEETTEEECTTSCCS-----------SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred EEeCCEeEccCCCcC-----------ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhc
Confidence 599999999865433 3333332 788888999988888778888888888888888888875555556
Q ss_pred ccCCCCceeecccccCCCcccCCcccccceeeCCCCccCCCCCCCCccccccccccccccccccccccccccccCccccc
Q 047739 135 GNLSNLEILNVAANRLSGEIANDLPRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIAN 214 (1099)
Q Consensus 135 ~~l~~L~~L~ls~N~l~~~i~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l~~ 214 (1099)
+++++|++|+|++|.++ +..+..|..+++|++|+|++|+|+ .+|..+..
T Consensus 85 ~~l~~L~~L~Ls~N~l~----------------------~l~~~~~~~l~~L~~L~Ls~N~l~---------~lp~~~~~ 133 (229)
T 3e6j_A 85 DSLTQLTVLDLGTNQLT----------------------VLPSAVFDRLVHLKELFMCCNKLT---------ELPRGIER 133 (229)
T ss_dssp TTCTTCCEEECCSSCCC----------------------CCCTTTTTTCTTCCEEECCSSCCC---------SCCTTGGG
T ss_pred ccCCCcCEEECCCCcCC----------------------ccChhHhCcchhhCeEeccCCccc---------ccCccccc
Confidence 77777777776666665 344455677788888888888876 56667777
Q ss_pred cCceeEEEccCCcCCccChhhhcCCCCccEEEcccccCCCcc
Q 047739 215 CSSLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGVV 256 (1099)
Q Consensus 215 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 256 (1099)
+++|++|+|++|+|++..+..|..+++|++|+|++|.+....
T Consensus 134 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 134 LTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred CCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 888888888888888777777888888888888888887544
No 356
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.79 E-value=1.1e-21 Score=236.09 Aligned_cols=35 Identities=17% Similarity=0.151 Sum_probs=22.5
Q ss_pred ceeEEEccCCcCCccChhhhcCCCCccEEEcccccCC
Q 047739 217 SLVHLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLS 253 (1099)
Q Consensus 217 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 253 (1099)
.|+.|+|++|+|++ +|. |+.+++|++|+|++|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~ 476 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR 476 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc
Confidence 36667777777765 344 666666666666666665
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.77 E-value=1.4e-18 Score=191.98 Aligned_cols=171 Identities=27% Similarity=0.364 Sum_probs=84.5
Q ss_pred cCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCe
Q 047739 315 TRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKS 394 (1099)
Q Consensus 315 ~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 394 (1099)
..+++|++|++++|.+++. + .+..+++|++|+|++|++++..+ +..+++|++|+|++|++++ ++ .+..+++|++
T Consensus 43 ~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCE
T ss_pred hhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCE
Confidence 3455566666666665532 2 35555556666666665554332 5555555555555555553 22 2444555555
Q ss_pred eeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCcC
Q 047739 395 LTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAF 474 (1099)
Q Consensus 395 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l 474 (1099)
|++++|++++. ..+.++++|+.|++++|++++. ..+..+++|+.|++++|++++..+ +..+++|+.|+|++|.+
T Consensus 117 L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 117 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp EECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcC
Confidence 55555554432 2344455555555555555432 344455555555555555543332 44445555555555544
Q ss_pred CCcCCCCCCCCCCCCEEEeccCcCc
Q 047739 475 SGRIPASLGNLLKLTTLDLSKQNFS 499 (1099)
Q Consensus 475 ~~~~~~~l~~l~~L~~L~L~~n~l~ 499 (1099)
++. + .+.++++|+.|++++|+++
T Consensus 191 ~~l-~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 191 SDL-R-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp CBC-G-GGTTCTTCSEEEEEEEEEE
T ss_pred CCC-h-hhccCCCCCEEECcCCccc
Confidence 421 2 2444444444444444443
No 358
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.77 E-value=1.4e-18 Score=210.27 Aligned_cols=189 Identities=25% Similarity=0.351 Sum_probs=110.1
Q ss_pred eeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccC
Q 047739 296 LQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEG 375 (1099)
Q Consensus 296 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~ 375 (1099)
+..++++.+.+....+ +..+++|+.|+|++|.|+. ++ .|..+++|+.|+|++|.+++..+ +..+++|+.|+|++
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 3444555555554433 3456667777777777663 23 46666667777777776665433 66666667777766
Q ss_pred CcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccC
Q 047739 376 NRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVP 455 (1099)
Q Consensus 376 N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 455 (1099)
|++++ +| .+..+++|++|+|++|.+.+. ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|.+++..|
T Consensus 97 N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 97 NKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp SCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 66663 22 455566666666666666542 3455566666666666666543 445566666666666666654444
Q ss_pred cccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcc
Q 047739 456 ASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSG 500 (1099)
Q Consensus 456 ~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 500 (1099)
+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++.+
T Consensus 171 --l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 171 --LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp --GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred --hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 55566666666666666532 235555566666666655553
No 359
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.77 E-value=2.1e-18 Score=208.79 Aligned_cols=189 Identities=20% Similarity=0.256 Sum_probs=107.3
Q ss_pred ccceeeCCCCccCCCCCCCCccccccccccccccccccccccccccccCccccccCceeEEEccCCcCCccChhhhcCCC
Q 047739 161 NLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAIGALP 240 (1099)
Q Consensus 161 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 240 (1099)
++..+.++.+.+...++ +..+++|+.|++++|.++ .+| .++.+++|+.|+|++|++++..| +..++
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~---------~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~ 87 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK---------SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLK 87 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC---------CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCT
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC---------CCh-HHccCCCCCEEEeeCCCCCCChh--hccCC
Confidence 44555566666654433 456777777777777776 333 36677777777777777776554 77777
Q ss_pred CccEEEcccccCCCccCcccccccCCCCCcceEEEeccccccccCCCCCCCCCCceeEEEcCCCccccCcchhccCCCCc
Q 047739 241 KLQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTL 320 (1099)
Q Consensus 241 ~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L 320 (1099)
+|++|+|++|+|++ +|. ...+++|++|+|++|+|+++ ..+..+++|
T Consensus 88 ~L~~L~Ls~N~l~~-l~~-------------------------------l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L 133 (605)
T 1m9s_A 88 NLGWLFLDENKIKD-LSS-------------------------------LKDLKKLKSLSLEHNGISDI--NGLVHLPQL 133 (605)
T ss_dssp TCCEEECCSSCCCC-CTT-------------------------------STTCTTCCEEECTTSCCCCC--GGGGGCTTC
T ss_pred CCCEEECcCCCCCC-Chh-------------------------------hccCCCCCEEEecCCCCCCC--ccccCCCcc
Confidence 77777777777752 110 11234455555555555542 235555566
Q ss_pred cEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeeccCc
Q 047739 321 TRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAAN 400 (1099)
Q Consensus 321 ~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n 400 (1099)
+.|+|++|.|++. ..|..+++|++|+|++|.+++..| +..+++|+.|+|++|+|++. | .+..+++|+.|+|++|
T Consensus 134 ~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~L~~N 207 (605)
T 1m9s_A 134 ESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQ 207 (605)
T ss_dssp SEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEECCSE
T ss_pred CEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEccCC
Confidence 6666666665543 345555555555555555554333 55555555555555555532 2 3444444444444444
Q ss_pred ccc
Q 047739 401 LFS 403 (1099)
Q Consensus 401 ~l~ 403 (1099)
.+.
T Consensus 208 ~l~ 210 (605)
T 1m9s_A 208 ECL 210 (605)
T ss_dssp EEE
T ss_pred cCc
Confidence 444
No 360
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=6.7e-21 Score=229.39 Aligned_cols=203 Identities=20% Similarity=0.211 Sum_probs=104.9
Q ss_pred cccccccccccccccccccccccccccCccccccCceeEEEccCCc-------------CCccChhhhcCCCCccEEE-c
Q 047739 182 NLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNA-------------LGGVIPPAIGALPKLQVVS-L 247 (1099)
Q Consensus 182 ~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l~~l~~L~~L~l~~N~-------------l~~~~p~~~~~l~~L~~L~-L 247 (1099)
.+++|+.|+|++|+|+ .||++|+++++|++|++++|. +.+.+|..++.+++|+.|+ +
T Consensus 347 ~~~~L~~L~Ls~n~L~---------~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l 417 (567)
T 1dce_A 347 TDEQLFRCELSVEKST---------VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPM 417 (567)
T ss_dssp TTTTSSSCCCCHHHHH---------HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGG
T ss_pred cCccceeccCChhhHH---------hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcch
Confidence 3445555555555554 445555555555555554443 5567788888888888888 7
Q ss_pred ccccCCCccCcccccccCCCCCcceEEEeccccccccCCCCCCCCCCceeEEEcCCCccccCcchhccCCCCccEEeCCC
Q 047739 248 AQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSG 327 (1099)
Q Consensus 248 s~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 327 (1099)
+.|.+. .+..+.++.|.+..++. ..|+.|+|++|+|++
T Consensus 418 ~~n~~~----------------~L~~l~l~~n~i~~l~~-------~~L~~L~Ls~n~l~~------------------- 455 (567)
T 1dce_A 418 RAAYLD----------------DLRSKFLLENSVLKMEY-------ADVRVLHLAHKDLTV------------------- 455 (567)
T ss_dssp GHHHHH----------------HHHHHHHHHHHHHHHHH-------TTCSEEECTTSCCSS-------------------
T ss_pred hhcccc----------------hhhhhhhhcccccccCc-------cCceEEEecCCCCCC-------------------
Confidence 777653 12222333333333321 124444444444443
Q ss_pred CccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeeccCccccccC-
Q 047739 328 NSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSI- 406 (1099)
Q Consensus 328 N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~- 406 (1099)
+|. |+++++|++|+|++|.|+ .+|..+..+++|++|+|++|+|++ +| .++.+++|++|+|++|+|++..
T Consensus 456 ------lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~ 525 (567)
T 1dce_A 456 ------LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAA 525 (567)
T ss_dssp ------CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSST
T ss_pred ------CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCC
Confidence 333 444445555555555544 344455555555555555555553 34 4555555555555555555444
Q ss_pred CccCCCCCCCCEEEcccCcCccccch---hhhCCCCCCEEEc
Q 047739 407 PASFRNLPGLENLNLRHNSLSGSLPE---EVLGMNNLSTLDL 445 (1099)
Q Consensus 407 ~~~~~~l~~L~~L~L~~N~l~~~~~~---~~~~l~~L~~L~L 445 (1099)
|..|.++++|+.|+|++|.+++..|. .+..+++|+.|++
T Consensus 526 p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 526 IQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp TGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred cHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 55555556666666666666543321 1233566666653
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.76 E-value=2.6e-18 Score=189.78 Aligned_cols=190 Identities=26% Similarity=0.391 Sum_probs=135.6
Q ss_pred CccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeecc
Q 047739 319 TLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLA 398 (1099)
Q Consensus 319 ~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 398 (1099)
++..+.+..+.+++.. .+..+++|++|++++|.+... ..+..+++|++|+|++|++++..+ +..+++|++|+++
T Consensus 25 ~~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~ 98 (291)
T 1h6t_A 25 ETIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLD 98 (291)
T ss_dssp HHHHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccccc--chhhcCcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECC
Confidence 3555567777776433 345678899999999988754 347888899999999999885443 7888888888888
Q ss_pred CccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCCCcC
Q 047739 399 ANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRI 478 (1099)
Q Consensus 399 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 478 (1099)
+|.+++. ..+.++++|++|+|++|++++. ..+..+++|+.|++++|++++. ..+..+++|+.|++++|++++..
T Consensus 99 ~n~l~~~--~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~ 172 (291)
T 1h6t_A 99 ENKVKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIV 172 (291)
T ss_dssp SSCCCCG--GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCG
T ss_pred CCcCCCC--hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccch
Confidence 8888753 3477888888888888888753 4577777888888888877754 46677777777777777777544
Q ss_pred CCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccC
Q 047739 479 PASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSG 524 (1099)
Q Consensus 479 ~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 524 (1099)
+ +..+++|+.|++++|.+++. + .+..+++|+.|++++|+++.
T Consensus 173 ~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 173 P--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp G--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred h--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 4 66677777777777776642 2 35666666666666666653
No 362
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.76 E-value=2.2e-18 Score=196.91 Aligned_cols=156 Identities=23% Similarity=0.221 Sum_probs=85.7
Q ss_pred ccEEeCCCCccccCchhhhC-CCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeecc
Q 047739 320 LTRLDVSGNSISGKIPAQIG-GLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLA 398 (1099)
Q Consensus 320 L~~L~Ls~N~i~~~~p~~~~-~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 398 (1099)
++.|+|++|+|++..+..|. ++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 41 l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 120 (361)
T 2xot_A 41 TALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLY 120 (361)
T ss_dssp CSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECC
Confidence 45555555555544444444 55555555555555554444455555555555555555554444455555555555555
Q ss_pred CccccccCCccCCCCCCCCEEEcccCcCccccchhh---hCCCCCCEEEccCCcCccccCcccCCCCc--ccEEEccCCc
Q 047739 399 ANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEV---LGMNNLSTLDLSENKFSGEVPASIGNLSQ--LMVFNLSGNA 473 (1099)
Q Consensus 399 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~--L~~L~L~~N~ 473 (1099)
+|+|++..+..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|+...+..+..++. |+.|+|++|.
T Consensus 121 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~ 200 (361)
T 2xot_A 121 NNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNP 200 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSC
T ss_pred CCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCC
Confidence 555555555556666666666666666664333333 34566666666666666544455555555 3667777776
Q ss_pred CC
Q 047739 474 FS 475 (1099)
Q Consensus 474 l~ 475 (1099)
+.
T Consensus 201 ~~ 202 (361)
T 2xot_A 201 LE 202 (361)
T ss_dssp EE
T ss_pred cc
Confidence 65
No 363
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.75 E-value=6.1e-18 Score=193.21 Aligned_cols=176 Identities=24% Similarity=0.208 Sum_probs=101.3
Q ss_pred CEEEccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCC-CCCCCCEEEcccCcCccccchhhhCCCCCCEEEccC
Q 047739 369 SLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFR-NLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSE 447 (1099)
Q Consensus 369 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 447 (1099)
+++++++|+++ .+|..+. ..++.|+|++|+|++..+..|. ++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 45555555555 3444333 2355555555555555555555 566666666666666655555566666666666666
Q ss_pred CcCccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCccc---CCCCccceeeeccccccC
Q 047739 448 NKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIEL---AGLPNLQVIALQENKLSG 524 (1099)
Q Consensus 448 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l---~~l~~L~~L~L~~N~l~~ 524 (1099)
|+|+...+..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|++++..+..+ ..+++|+.|+|++|++++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 66665555556666666666666666665555666666666666666666664333333 345666666666666665
Q ss_pred CCchhhhcccc--cceecccccccC
Q 047739 525 NVPEGFSSLMS--LRYLNLSFNGFV 547 (1099)
Q Consensus 525 ~~p~~~~~l~~--L~~L~Ls~N~l~ 547 (1099)
..+..|..++. |+.|+|++|.+.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 55455555554 355566655553
No 364
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.75 E-value=1.1e-17 Score=176.70 Aligned_cols=128 Identities=23% Similarity=0.320 Sum_probs=57.5
Q ss_pred eEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCC
Q 047739 297 QVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGN 376 (1099)
Q Consensus 297 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N 376 (1099)
+.+++++|+++. +|..+. ++|++|+|++|.|++..+..|.++++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 345556665553 233222 34555555555555444444555555555555555555444444554555555555555
Q ss_pred cCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCc
Q 047739 377 RFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLS 427 (1099)
Q Consensus 377 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 427 (1099)
+|+...+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+++
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 141 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ 141 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCC
Confidence 444322233333433333333333333333333333333333333333333
No 365
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.74 E-value=1.6e-17 Score=175.33 Aligned_cols=152 Identities=22% Similarity=0.311 Sum_probs=83.4
Q ss_pred CEEEccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCC
Q 047739 369 SLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSEN 448 (1099)
Q Consensus 369 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 448 (1099)
+.+++++|.++ .+|..+. ++|++|+|++|.|+++.+..|.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 34555555554 3444332 34555555555555555555555555555555555555555555555555555555555
Q ss_pred cCccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeecccccc
Q 047739 449 KFSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLS 523 (1099)
Q Consensus 449 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~ 523 (1099)
.|+...+..|..+++|+.|+|++|++++..+..|.++++|++|+|++|++++..+..+..+++|+.|+|++|.+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 555444444555555555555555555555555555555555555555555544445555555555555555554
No 366
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.74 E-value=2.1e-17 Score=174.48 Aligned_cols=131 Identities=22% Similarity=0.321 Sum_probs=66.6
Q ss_pred CEEEccCCcCCCCCC-ccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccC
Q 047739 369 SLLDLEGNRFSGEIP-EFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSE 447 (1099)
Q Consensus 369 ~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 447 (1099)
++|+|++|+|++..+ ..|..+++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 35 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 114 (220)
T 2v70_A 35 AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRS 114 (220)
T ss_dssp SEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTT
T ss_pred CEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCC
Confidence 344444444443322 2234444444444444444444444455555555555555555544444455555555555555
Q ss_pred CcCccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCc
Q 047739 448 NKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFS 499 (1099)
Q Consensus 448 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~ 499 (1099)
|++++..|..|..+++|+.|+|++|++++..|..|..+++|++|++++|.+.
T Consensus 115 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 115 NRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp SCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred CcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 5555555555555555555555555555444555555555555555555554
No 367
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.74 E-value=1.3e-17 Score=177.18 Aligned_cols=135 Identities=26% Similarity=0.287 Sum_probs=81.8
Q ss_pred cccceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccCcccEEec
Q 047739 534 MSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDL 613 (1099)
Q Consensus 534 ~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 613 (1099)
++|++|+|++|.+++..|..|..+++|+.|+|++|+++...+..|.++++|++|+|++|++++..+..+..+++|+.|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 45555555555555555555555555555555555555444445566666666666666666444444566666666666
Q ss_pred cCccccccCCcccCCCCCCCEEECcCccccccCChhhhccCCCCeeecCCCcCCCc
Q 047739 614 SINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLSGE 669 (1099)
Q Consensus 614 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~ 669 (1099)
++|+|+ .+|..+..+++|+.|+|++|+|++..+..+..+++|+.|++++|++++.
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 666666 5666666666666666666666654455566666667777777766654
No 368
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.74 E-value=1.8e-17 Score=174.90 Aligned_cols=155 Identities=20% Similarity=0.275 Sum_probs=128.8
Q ss_pred CEEEccCCcCCCCCCccccCCCCCCeeeccCccccccCC-ccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccC
Q 047739 369 SLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIP-ASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSE 447 (1099)
Q Consensus 369 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 447 (1099)
+++++++|.++ .+|..+. ..+++|+|++|++++..+ ..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 58899999988 5676654 456899999999987754 5578889999999999999877777888888999999999
Q ss_pred CcCccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCC
Q 047739 448 NKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNV 526 (1099)
Q Consensus 448 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 526 (1099)
|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|+.|+|++|.+....
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 9988877778888888888888888888877888888888888888888888777888888888888888888887543
No 369
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.72 E-value=2.2e-18 Score=214.19 Aligned_cols=223 Identities=22% Similarity=0.228 Sum_probs=118.6
Q ss_pred CCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEe
Q 047739 414 PGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDL 493 (1099)
Q Consensus 414 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L 493 (1099)
+.++.|+|.+|.+.. .+. ..|+.++|+.|.|.+ +++..|.+. ..+..+..+..|+.|+|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~-----~~l~~l~Ls~~~i~~--------------~~~~~n~~~-~~~~~~~~l~~L~~L~L 231 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQ-----ALLQHKKLSQYSIDE--------------DDDIENRMV-MPKDSKYDDQLWHALDL 231 (727)
T ss_dssp ----------------------------------------------------------------------CCCCCCEEEC
T ss_pred CccceEEeeCCCCCc-chh-----hHhhcCccCcccccC--------------cccccccee-cChhhhccCCCCcEEEC
Confidence 345666666666653 222 234555555555542 234455555 55677777888888888
Q ss_pred ccCcCcccCCcccCCCCccceeeeccccccCCCchhhhcccccceecccccccCCCCCCcccccceeeEEEccCCcCCCC
Q 047739 494 SKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGS 573 (1099)
Q Consensus 494 ~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~ 573 (1099)
++|.+. .+|..+..+++|+.|+|++|.|+ .+|..|..+++|++|+|++|.|+ .+|..|+.+++|+.|+|++|.|+ .
T Consensus 232 s~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~ 307 (727)
T 4b8c_D 232 SNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-T 307 (727)
T ss_dssp TTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-C
T ss_pred CCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-c
Confidence 888887 66667778888899999999888 78888899999999999999998 77888999999999999999997 7
Q ss_pred CCCCCCCCCCCceEEecCCcccCcCCcchhccCc-ccEEeccCccccccCCcccCCCCCCCEEECcCc--------cccc
Q 047739 574 IPPELGNCSDLEVLELRSNSLTGHIPTDISHLSH-LNVLDLSINNLTGEIPDEISKCSSLRSLLVNSN--------HLSG 644 (1099)
Q Consensus 574 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N--------~l~~ 644 (1099)
+|..|+++++|++|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|.. |+.|++++| .|.+
T Consensus 308 lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~ 381 (727)
T 4b8c_D 308 LPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQ 381 (727)
T ss_dssp CCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------------------
T ss_pred cChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCccc
Confidence 7888999999999999999999888888766532 335889999999888764 556677777 2333
Q ss_pred cCChhhhccCCCCeeecCCCcCC
Q 047739 645 GIPDSLAKLSNLAVLDLSANNLS 667 (1099)
Q Consensus 645 ~~p~~l~~l~~L~~L~ls~N~l~ 667 (1099)
..+..+.++..+....+++|-+.
T Consensus 382 ~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 382 STEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp --------------------CCC
T ss_pred cccchhhcccccceeeeeccccc
Confidence 33333444444555555555544
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.72 E-value=6.4e-18 Score=183.62 Aligned_cols=166 Identities=20% Similarity=0.278 Sum_probs=85.9
Q ss_pred ceeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEcc
Q 047739 295 VLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLE 374 (1099)
Q Consensus 295 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls 374 (1099)
.+..+++++|.+++.. .+..+++|++|++++|.|+. ++ .+..+++|++|+|++|++++..+ +..+++|++|+|+
T Consensus 20 ~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~ 93 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVN 93 (263)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECC
T ss_pred HHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECC
Confidence 3455566666665433 35556666666666666653 33 45566666666666666664333 5566666666666
Q ss_pred CCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCcccc
Q 047739 375 GNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEV 454 (1099)
Q Consensus 375 ~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 454 (1099)
+|++++ +|.... ++|++|+|++|++++. +.+.++++|+.|+|++|++++. + .+..+++|+.|+|++|++++.
T Consensus 94 ~N~l~~-l~~~~~--~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~- 165 (263)
T 1xeu_A 94 RNRLKN-LNGIPS--ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT- 165 (263)
T ss_dssp SSCCSC-CTTCCC--SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC-
T ss_pred CCccCC-cCcccc--CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch-
Confidence 666653 332221 4555555555555432 2344555555555555555432 2 344445555555555554433
Q ss_pred CcccCCCCcccEEEccCCcCC
Q 047739 455 PASIGNLSQLMVFNLSGNAFS 475 (1099)
Q Consensus 455 ~~~l~~l~~L~~L~L~~N~l~ 475 (1099)
..+..+++|+.|++++|.+.
T Consensus 166 -~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 166 -GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp -TTSTTCCCCCEEEEEEEEEE
T ss_pred -HHhccCCCCCEEeCCCCccc
Confidence 33444444444444444444
No 371
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.71 E-value=1.5e-17 Score=180.05 Aligned_cols=135 Identities=19% Similarity=0.156 Sum_probs=105.1
Q ss_pred cccccccccccceeEEEEEE-CCceE--EEEEECCCCCcc-------------------------HHHHHHHHHHhhhcc
Q 047739 805 FDEENVLSRTRYGLVFKACY-NDGMV--LSIRRLPDGSLD-------------------------ENLFRKEAEFLGKVR 856 (1099)
Q Consensus 805 ~~~~~~lg~G~~g~Vy~~~~-~~g~~--vavK~~~~~~~~-------------------------~~~~~~E~~~l~~l~ 856 (1099)
|++.+.||+|+||.||+|.+ .+|+. ||+|.+...... ...+.+|++++++++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 66788999999999999998 67888 999986432111 136789999999998
Q ss_pred CCcc--eEEeeEEecCCCceEEEEeecCC-C----CHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHc-cCCceec
Q 047739 857 HRNL--TVLRGYYAGAPDLRLLVYDYMPN-G----NLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLH-TSNMVHG 928 (1099)
Q Consensus 857 H~ni--v~l~~~~~~~~~~~~lV~e~~~~-g----sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH-~~~iiH~ 928 (1099)
|+++ ..++++ ...++||||+.+ | +|.++... .++.....++.|++.|++||| +.||+||
T Consensus 129 ~~~i~~p~~~~~-----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~~~givHr 195 (258)
T 1zth_A 129 EAGVSVPQPYTY-----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQEAELVHA 195 (258)
T ss_dssp HTTCCCCCEEEE-----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHHTSCEECS
T ss_pred hCCCCCCeEEEc-----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHHHCCEEeC
Confidence 8864 333332 124899999942 4 66665432 224456789999999999999 9999999
Q ss_pred CCCCCCEEECCCCcEEEecccccccc
Q 047739 929 DIKPQNVLFDADFEAHLSDFGLDRLT 954 (1099)
Q Consensus 929 Dlk~~NIll~~~~~~kl~DfGla~~~ 954 (1099)
||||+|||++. .++|+|||+|...
T Consensus 196 Dlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 196 DLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCHHHEEEcC--cEEEEECcccccC
Confidence 99999999998 9999999999753
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.71 E-value=1.6e-17 Score=180.57 Aligned_cols=171 Identities=23% Similarity=0.330 Sum_probs=133.4
Q ss_pred CCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCee
Q 047739 316 RASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSL 395 (1099)
Q Consensus 316 ~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 395 (1099)
.+.++..+++++|.+++. + .+..+++|++|++++|.++. ++ .+..+++|++|+|++|++++..+ +..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 456788889999999854 3 67888999999999999984 44 78889999999999999985444 8888899999
Q ss_pred eccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCC
Q 047739 396 TLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFS 475 (1099)
Q Consensus 396 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 475 (1099)
+|++|++++..+ +.. ++|++|+|++|++++. +.+..+++|+.|+|++|++++. + .+..+++|+.|+|++|+++
T Consensus 91 ~L~~N~l~~l~~--~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKNLNG--IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSCCTT--CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCCcCc--ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 999998886433 222 7888888888888853 3577888888888888888754 3 5777788888888888887
Q ss_pred CcCCCCCCCCCCCCEEEeccCcCccc
Q 047739 476 GRIPASLGNLLKLTTLDLSKQNFSGE 501 (1099)
Q Consensus 476 ~~~~~~l~~l~~L~~L~L~~n~l~~~ 501 (1099)
+. ..+..+++|+.|++++|++.+.
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ch--HHhccCCCCCEEeCCCCcccCC
Confidence 55 5677777777777777777644
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=1.7e-17 Score=172.10 Aligned_cols=154 Identities=20% Similarity=0.304 Sum_probs=96.6
Q ss_pred CCCCccceeeeccccccCCCchhhhcccccceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCce
Q 047739 507 AGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEV 586 (1099)
Q Consensus 507 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~ 586 (1099)
..+++|+.|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..+..++.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 34455555555555555 333 4555666666666666443 2235556666666666666666556666777777777
Q ss_pred EEecCCcccCcCCcchhccCcccEEeccCcc-ccccCCcccCCCCCCCEEECcCccccccCChhhhccCCCCeeecCCCc
Q 047739 587 LELRSNSLTGHIPTDISHLSHLNVLDLSINN-LTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANN 665 (1099)
Q Consensus 587 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~ 665 (1099)
|++++|++++..|..++.+++|+.|++++|+ ++ .+| .+..+++|+.|++++|++++ ++ .+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 7777777776666667777777777777776 44 455 46677777777777777764 33 66777777777777777
Q ss_pred CCC
Q 047739 666 LSG 668 (1099)
Q Consensus 666 l~~ 668 (1099)
+.+
T Consensus 193 i~~ 195 (197)
T 4ezg_A 193 IGG 195 (197)
T ss_dssp ---
T ss_pred cCC
Confidence 653
No 374
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.71 E-value=1.6e-17 Score=187.21 Aligned_cols=296 Identities=16% Similarity=0.135 Sum_probs=158.1
Q ss_pred cccCccccc--cCceeEEEccCCcCCccChhhhcC-CCCccEEEcccccCCCccCcccccccCCCCCcceEEEecccccc
Q 047739 206 GTLPSAIAN--CSSLVHLSAQGNALGGVIPPAIGA-LPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFT 282 (1099)
Q Consensus 206 g~lp~~l~~--l~~L~~L~l~~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n~~~ 282 (1099)
|+++..+.. +.++++|.++++ +....-..+.. +++|++|||++|+++. |.....
T Consensus 13 g~l~~~l~~~~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~------~~~~~~---------------- 69 (329)
T 3sb4_A 13 GTLISMMTEEEANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKM------YSGKAG---------------- 69 (329)
T ss_dssp TCGGGGSCHHHHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECC------EEESSS----------------
T ss_pred CcHHhhccchhhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEE------ecCccc----------------
Confidence 344444433 567777877764 22222234444 7889999999998861 111000
Q ss_pred ccCCCCCCCCCCceeEEEcCCCccccCcchhccC--------CCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCcc
Q 047739 283 NVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLTR--------ASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSF 354 (1099)
Q Consensus 283 ~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~--------l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l 354 (1099)
..+.+..+.+..|.| .+..|.. +++|++|+|.+ .++.+.+.+|.++++|++|++.+|.+
T Consensus 70 ---------~~~~~~~~~~~~~~I---~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i 136 (329)
T 3sb4_A 70 ---------TYPNGKFYIYMANFV---PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTA 136 (329)
T ss_dssp ---------SSGGGCCEEECTTEE---CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSC
T ss_pred ---------ccccccccccccccc---CHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCc
Confidence 011123333444422 2344555 77888888877 77666666777778888888887777
Q ss_pred CccCCccccCCCCCCEEEccCCc----CCCCCCccccCCCCCC-eeeccCcc-ccccCCccCCCCCCCCEEEcccCcCcc
Q 047739 355 GGAVPVEIKQCSSLSLLDLEGNR----FSGEIPEFLGDIRGLK-SLTLAANL-FSGSIPASFRNLPGLENLNLRHNSLSG 428 (1099)
Q Consensus 355 ~~~~~~~l~~l~~L~~L~Ls~N~----l~~~~p~~~~~l~~L~-~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~N~l~~ 428 (1099)
....+..|..+.++..+.+..+. ........|.++.+|+ .+.+.... +.......-....++..+.+.++-..
T Consensus 137 ~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~- 215 (329)
T 3sb4_A 137 PNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN- 215 (329)
T ss_dssp CEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-
T ss_pred cccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecH-
Confidence 76667777777777666665532 1212223344444444 23322211 00000011112344555555544222
Q ss_pred ccchhh-hCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCC-EEEeccCcCcccCCccc
Q 047739 429 SLPEEV-LGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLT-TLDLSKQNFSGELPIEL 506 (1099)
Q Consensus 429 ~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~-~L~L~~n~l~~~~~~~l 506 (1099)
.....+ ..+++|+.|+|++|+++.+.+.+|.++.+|+.|+|.+| ++...+.+|.++.+|+ .+++.+ .++.+.+..|
T Consensus 216 ~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF 293 (329)
T 3sb4_A 216 ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAF 293 (329)
T ss_dssp HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTT
T ss_pred HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhh
Confidence 111122 13566666666666666555556666666666666665 5545555666666666 666665 4554555555
Q ss_pred CCCCccceeeeccccccCCCchhhhcccccceec
Q 047739 507 AGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLN 540 (1099)
Q Consensus 507 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 540 (1099)
.++++|+.+++++|.++.+.+.+|.++++|+.++
T Consensus 294 ~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 294 MGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp TTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred hCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 5566666666555555544455555555555553
No 375
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.71 E-value=1.3e-17 Score=188.00 Aligned_cols=293 Identities=13% Similarity=0.101 Sum_probs=156.9
Q ss_pred ccccccccc--cccccceEEccCCccCcccCccccc-CCcccEEEeccccCC--CccCcccccCCCCceeecccccCCCc
Q 047739 79 SGRISDHLS--NLRMLRKLSLRSNSFNGTIPATLAQ-CTLLRAVFLQYNSLS--GNLPANIGNLSNLEILNVAANRLSGE 153 (1099)
Q Consensus 79 ~g~~~~~l~--~l~~L~~L~L~~n~~~~~~p~~~~~-l~~L~~L~l~~n~l~--g~~p~~~~~l~~L~~L~ls~N~l~~~ 153 (1099)
.|.++..+. .+..++.|.++++ +.+.--..+.. +++|++|||++|+++ ...+. .++.
T Consensus 12 ~g~l~~~l~~~~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~---~~~~-------------- 73 (329)
T 3sb4_A 12 PGTLISMMTEEEANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAG---TYPN-------------- 73 (329)
T ss_dssp TTCGGGGSCHHHHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSS---SSGG--------------
T ss_pred CCcHHhhccchhhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccc---cccc--------------
Confidence 345554444 3777888888754 22111112233 566777777777666 11111 1111
Q ss_pred ccCCcccccceeeCCCCccCCCCCCCCcc--------ccccccccccccccccccccccccccCccccccCceeEEEccC
Q 047739 154 IANDLPRNLKYFDLSSNGFSGPIPTSISN--------LSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQG 225 (1099)
Q Consensus 154 i~~~~~~~L~~L~ls~N~l~~~~p~~~~~--------l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l~~l~~L~~L~l~~ 225 (1099)
++.+.+..|.|. +.+|.+ +++|+.|+|.+ .++.+.+.+|. .+++|+.|++++
T Consensus 74 --------~~~~~~~~~~I~---~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~--------~~~~L~~l~l~~ 133 (329)
T 3sb4_A 74 --------GKFYIYMANFVP---AYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFK--------GCDNLKICQIRK 133 (329)
T ss_dssp --------GCCEEECTTEEC---TTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTT--------TCTTCCEEEBCC
T ss_pred --------cccccccccccC---HHHhcccccccccccCCCcEEECCc-cccchhHHHhh--------cCcccceEEcCC
Confidence 233333333221 234555 88888888888 77755554444 477888888888
Q ss_pred CcCCccChhhhcCCCCccEEEcccccCC---CccCcccccccCCCCCcceEEEeccccccccCCCCCCCCCCcee-EEEc
Q 047739 226 NALGGVIPPAIGALPKLQVVSLAQNNLS---GVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQ-VLDL 301 (1099)
Q Consensus 226 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~---~~~p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~-~L~L 301 (1099)
|.+..+.+.+|..+.++..+.+..+... ..+....|.+. ..|+ .+++
T Consensus 134 n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~-----------------------------~~L~~~i~~ 184 (329)
T 3sb4_A 134 KTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEG-----------------------------EPLETTIQV 184 (329)
T ss_dssp SSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEES-----------------------------CCCEEEEEE
T ss_pred CCccccchhhhcCCCceEEecCcchhhhhccccccccccccc-----------------------------cccceeEEe
Confidence 8888777788888777777776653221 01222222221 1122 2222
Q ss_pred CCCccccCcchhc----cCCCCccEEeCCCCccccCchhhh-CCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCC
Q 047739 302 QQNQIRGAFPLWL----TRASTLTRLDVSGNSISGKIPAQI-GGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGN 376 (1099)
Q Consensus 302 ~~n~l~~~~~~~~----~~l~~L~~L~Ls~N~i~~~~p~~~-~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N 376 (1099)
.... .++..+ ....+++.+.+.++-.. .....+ ..+++|+.|+|++|+++......|.+|++|+.|+|.+|
T Consensus 185 ~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n 260 (329)
T 3sb4_A 185 GAMG---KLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN 260 (329)
T ss_dssp CTTC---CHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT
T ss_pred cCCC---cHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc
Confidence 2211 111111 12334445554443221 111111 12556666666666666555556666666666666665
Q ss_pred cCCCCCCccccCCCCCC-eeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEE
Q 047739 377 RFSGEIPEFLGDIRGLK-SLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLD 444 (1099)
Q Consensus 377 ~l~~~~p~~~~~l~~L~-~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 444 (1099)
++...+..|.++++|+ .+++.+ .++.+.+.+|.++++|+.+++++|+++...+.+|.++++|+.|+
T Consensus 261 -i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 261 -LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp -CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred -cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 5544455666666666 666666 55556666677777777777767776655556666777776665
No 376
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.69 E-value=6.5e-17 Score=167.66 Aligned_cols=151 Identities=15% Similarity=0.233 Sum_probs=82.1
Q ss_pred CCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEE
Q 047739 341 LWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLN 420 (1099)
Q Consensus 341 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 420 (1099)
+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..+..+.++++|++|+
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 344445555555444 222 3455555555555555443 122455555555555555555555555566666666666
Q ss_pred cccCcCccccchhhhCCCCCCEEEccCCc-CccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCc
Q 047739 421 LRHNSLSGSLPEEVLGMNNLSTLDLSENK-FSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFS 499 (1099)
Q Consensus 421 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~ 499 (1099)
|++|++++..+..+..+++|++|++++|. ++ .++ .+..+++|+.|++++|++++ ++ .+..+++|++|++++|++.
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC---
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccC
Confidence 66666665556666666666666666665 44 233 45556666666666666653 22 4555556666666666554
No 377
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.67 E-value=2.2e-16 Score=162.83 Aligned_cols=132 Identities=21% Similarity=0.265 Sum_probs=84.0
Q ss_pred ceeeeccccccCCCchhhhcccccceecccccccCCCCCC-cccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecC
Q 047739 513 QVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPA-TFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRS 591 (1099)
Q Consensus 513 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~ 591 (1099)
+.+++++|.++ .+|..+. .+|++|++++|++++..+. .+..+++|+.|+|++|++++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 34444444443 3343332 2556666666666544443 356666666666666666666666677777777777777
Q ss_pred CcccCcCCcchhccCcccEEeccCccccccCCcccCCCCCCCEEECcCccccccCC
Q 047739 592 NSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNHLSGGIP 647 (1099)
Q Consensus 592 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 647 (1099)
|++++..+..+..+++|+.|+|++|+|++.+|..+..+++|++|+|++|++++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 77776666667777777777777777776667777777777777777777765543
No 378
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.65 E-value=8.4e-16 Score=158.37 Aligned_cols=133 Identities=23% Similarity=0.317 Sum_probs=120.5
Q ss_pred cceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCC-CCCCCCCCceEEecCCcccCcCCcchhccCcccEEecc
Q 047739 536 LRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPP-ELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLS 614 (1099)
Q Consensus 536 L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~-~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 614 (1099)
-+++++++|.++ .+|..+.. +|+.|++++|++++..+. .++.+++|++|+|++|++++..|..|..+++|+.|+|+
T Consensus 10 ~~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 10 GTTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TTEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 378999999996 66765543 899999999999976664 48999999999999999998889999999999999999
Q ss_pred CccccccCCcccCCCCCCCEEECcCccccccCChhhhccCCCCeeecCCCcCCCcCC
Q 047739 615 INNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLSGEIP 671 (1099)
Q Consensus 615 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p 671 (1099)
+|+|++..|..+..+++|++|+|++|++++.+|..+..+++|+.|++++|++++..+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 999998888889999999999999999999999999999999999999999998655
No 379
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.63 E-value=9.9e-16 Score=154.28 Aligned_cols=137 Identities=23% Similarity=0.222 Sum_probs=117.7
Q ss_pred ccccceecccccccC-CCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccCcccEE
Q 047739 533 LMSLRYLNLSFNGFV-GQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVL 611 (1099)
Q Consensus 533 l~~L~~L~Ls~N~l~-~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 611 (1099)
.++|+.|++++|.++ +.+|..+..+++|+.|++++|++++. ..++.+++|++|+|++|++++.+|..+..+++|+.|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 367888888888887 67788888888999999999998865 788899999999999999997788888889999999
Q ss_pred eccCccccccCC--cccCCCCCCCEEECcCccccccCC---hhhhccCCCCeeecCCCcCCCcCCCC
Q 047739 612 DLSINNLTGEIP--DEISKCSSLRSLLVNSNHLSGGIP---DSLAKLSNLAVLDLSANNLSGEIPAN 673 (1099)
Q Consensus 612 ~Ls~N~l~~~~p--~~l~~l~~L~~L~Ls~N~l~~~~p---~~l~~l~~L~~L~ls~N~l~~~~p~~ 673 (1099)
+|++|++++ +| ..+..+++|+.|++++|++++..+ ..+..+++|+.|++++|.+. ++|..
T Consensus 101 ~Ls~N~l~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~~ 165 (168)
T 2ell_A 101 NLSGNKLKD-ISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPDS 165 (168)
T ss_dssp ECBSSSCCS-SGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCSS
T ss_pred eccCCccCc-chhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hcccc
Confidence 999999985 44 789999999999999999996555 48999999999999999987 45543
No 380
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.61 E-value=1.1e-14 Score=167.40 Aligned_cols=268 Identities=12% Similarity=0.117 Sum_probs=146.0
Q ss_pred eeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccC
Q 047739 296 LQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEG 375 (1099)
Q Consensus 296 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~ 375 (1099)
++.+.+.+ .++.+...+|.+. +|+.+++.+| ++.+...+|.+. +|+.+.+.+ .+.......|.+|++|+.++|++
T Consensus 115 l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~ 189 (401)
T 4fdw_A 115 YNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSK 189 (401)
T ss_dssp CSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTT
T ss_pred ccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCC
Confidence 34444432 3444445556653 5777777655 554555566663 577777664 45545556666677777777776
Q ss_pred CcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccC
Q 047739 376 NRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVP 455 (1099)
Q Consensus 376 N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 455 (1099)
|+++......|. ..+|+.+.|..+ ++.+...+|.++++|+.+++..| ++.....+|.+ .+|+.+.+ .+.++.+..
T Consensus 190 n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~ 264 (401)
T 4fdw_A 190 TKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIAS 264 (401)
T ss_dssp SCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECT
T ss_pred CcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEECh
Confidence 666643334444 456666666533 55555566666666666666553 33333444444 45555555 233443444
Q ss_pred cccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhcccc
Q 047739 456 ASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMS 535 (1099)
Q Consensus 456 ~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 535 (1099)
.+|.++++|+.+++.+|.+.. +.+....+..|.++++|+.+.|. +.++.+...+|.++++
T Consensus 265 ~aF~~c~~L~~l~l~~~~~~~-------------------~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~ 324 (401)
T 4fdw_A 265 RAFYYCPELAEVTTYGSTFND-------------------DPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRK 324 (401)
T ss_dssp TTTTTCTTCCEEEEESSCCCC-------------------CTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCS
T ss_pred hHhhCCCCCCEEEeCCccccC-------------------CcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCC
Confidence 555555555555555544430 00002333445555555555555 2344344455555666
Q ss_pred cceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCC-CCceEEecCCccc
Q 047739 536 LRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCS-DLEVLELRSNSLT 595 (1099)
Q Consensus 536 L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~-~L~~L~L~~N~l~ 595 (1099)
|+.++|..| ++......|.++ +|+.+++++|.+....+..|.+++ +++.|++..+.+.
T Consensus 325 L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 325 VTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred ccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 666666433 444455566666 666666666666555555666663 6777777776654
No 381
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.60 E-value=3.2e-14 Score=163.66 Aligned_cols=265 Identities=8% Similarity=0.074 Sum_probs=166.5
Q ss_pred CCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeec
Q 047739 318 STLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTL 397 (1099)
Q Consensus 318 ~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 397 (1099)
..++.+.+.++ ++.+...+|.+. +|+.+.+.++ ++.....+|.++ +|+.++|.. .++
T Consensus 113 ~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~------------------ 169 (401)
T 4fdw_A 113 KGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLE------------------ 169 (401)
T ss_dssp SSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCC------------------
T ss_pred CCccEEEECCc-cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-Ccc------------------
Confidence 45666666543 333444555553 5666666544 443444445443 455555543 333
Q ss_pred cCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccCCcCCCc
Q 047739 398 AANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGR 477 (1099)
Q Consensus 398 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 477 (1099)
.+...+|.++++|+.++|.+|+++.....+|. ..+|+.+.|..+ ++.+...+|.++++|+.+++..| ++..
T Consensus 170 ------~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I 240 (401)
T 4fdw_A 170 ------QLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTI 240 (401)
T ss_dssp ------EECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEE
T ss_pred ------EehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCc
Confidence 34444455555555555555555533233333 345555555532 44444455555555555555543 3333
Q ss_pred CCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeecccccc-----CCCchhhhcccccceecccccccCCCCCC
Q 047739 478 IPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLS-----GNVPEGFSSLMSLRYLNLSFNGFVGQIPA 552 (1099)
Q Consensus 478 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 552 (1099)
...+|.+ .+|+.+.+. +.++......|.++++|+.+.+.+|.+. .+.+.+|.++++|+.+++. +.++.....
T Consensus 241 ~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~ 317 (401)
T 4fdw_A 241 GQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQG 317 (401)
T ss_dssp CTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTT
T ss_pred ccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhh
Confidence 4445555 456666663 3455455566666666666666666553 3566789999999999999 558777788
Q ss_pred cccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccC-cccEEeccCcccc
Q 047739 553 TFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLS-HLNVLDLSINNLT 619 (1099)
Q Consensus 553 ~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~ 619 (1099)
.|.++++|+.++|..| ++..-+.+|.++ +|+.+++++|.+....+..|..++ .++.|++..+.+.
T Consensus 318 aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 318 LLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp TTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred hhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 9999999999999665 765667899999 999999999999866666777774 7899999988765
No 382
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=1.6e-15 Score=149.35 Aligned_cols=129 Identities=19% Similarity=0.182 Sum_probs=108.0
Q ss_pred ccccceecccccccC-CCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccCcccEE
Q 047739 533 LMSLRYLNLSFNGFV-GQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVL 611 (1099)
Q Consensus 533 l~~L~~L~Ls~N~l~-~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 611 (1099)
.++|+.|++++|.++ +.+|..+..+++|+.|++++|++++. ..++.+++|++|++++|++++.+|..+..+++|+.|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 467888888888887 67777788888888888888888865 778889999999999999987788888889999999
Q ss_pred eccCcccccc-CCcccCCCCCCCEEECcCccccccCC---hhhhccCCCCeeecCC
Q 047739 612 DLSINNLTGE-IPDEISKCSSLRSLLVNSNHLSGGIP---DSLAKLSNLAVLDLSA 663 (1099)
Q Consensus 612 ~Ls~N~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~p---~~l~~l~~L~~L~ls~ 663 (1099)
++++|++++. .|..++.+++|++|++++|++++..+ ..+..+++|+.||+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999862 34788899999999999999986655 5788899999998874
No 383
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.60 E-value=2e-15 Score=152.10 Aligned_cols=132 Identities=19% Similarity=0.219 Sum_probs=61.7
Q ss_pred CCccEEeCCCCccc-cCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeee
Q 047739 318 STLTRLDVSGNSIS-GKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLT 396 (1099)
Q Consensus 318 ~~L~~L~Ls~N~i~-~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 396 (1099)
++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 34445555555444 33444444444455555555444433 3444445555555555555443444444444444444
Q ss_pred ccCccccccC-CccCCCCCCCCEEEcccCcCccccc---hhhhCCCCCCEEEccCCcCc
Q 047739 397 LAANLFSGSI-PASFRNLPGLENLNLRHNSLSGSLP---EEVLGMNNLSTLDLSENKFS 451 (1099)
Q Consensus 397 L~~n~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls~N~l~ 451 (1099)
|++|.+++.. +..+.++++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 4444444321 1344445555555555555553322 24444555555555555444
No 384
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.57 E-value=2.9e-15 Score=147.55 Aligned_cols=126 Identities=20% Similarity=0.237 Sum_probs=63.4
Q ss_pred CccEEeCCCCccc-cCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeec
Q 047739 319 TLTRLDVSGNSIS-GKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTL 397 (1099)
Q Consensus 319 ~L~~L~Ls~N~i~-~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 397 (1099)
+|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|++
T Consensus 18 ~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred cCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 3444444444444 34444444444455555555544433 34445555555555555555444444444555555555
Q ss_pred cCcccccc-CCccCCCCCCCCEEEcccCcCccccc---hhhhCCCCCCEEEcc
Q 047739 398 AANLFSGS-IPASFRNLPGLENLNLRHNSLSGSLP---EEVLGMNNLSTLDLS 446 (1099)
Q Consensus 398 ~~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls 446 (1099)
++|++++. .+..+.++++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 55554432 22445555566666666666654433 345556666666554
No 385
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.56 E-value=1.5e-14 Score=149.00 Aligned_cols=127 Identities=28% Similarity=0.375 Sum_probs=65.7
Q ss_pred ceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccCcccEEeccCc
Q 047739 537 RYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSIN 616 (1099)
Q Consensus 537 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 616 (1099)
+++++++|.++ .+|..+. ++|+.|++++|+++ .+|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 45566666665 3333322 34555555555555 44455555555555555555555444444555555555555555
Q ss_pred cccccCCcccCCCCCCCEEECcCccccccCChhhhccCCCCeeecCCCcCC
Q 047739 617 NLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLS 667 (1099)
Q Consensus 617 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~ 667 (1099)
+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|++.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 555444444555555555555555555333334555555555555555554
No 386
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.56 E-value=8e-14 Score=161.13 Aligned_cols=327 Identities=11% Similarity=0.064 Sum_probs=153.1
Q ss_pred hhccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCCcCCCCCCccccCCCC
Q 047739 312 LWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRG 391 (1099)
Q Consensus 312 ~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 391 (1099)
.+|.++.+|+.+.|..+ ++.+...+|.++++|+.+++.++ ++......|.++++|+.+.+..+ +.......|.++..
T Consensus 65 ~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~ 141 (394)
T 4fs7_A 65 AAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDF 141 (394)
T ss_dssp TTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCC
T ss_pred HHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecccc
Confidence 34555555555555432 44334445555555555555433 33333444555555555444433 22222333443322
Q ss_pred CCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccEEEccC
Q 047739 392 LKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMVFNLSG 471 (1099)
Q Consensus 392 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~ 471 (1099)
++..... .+......+|.++++|+.+.+.++..+ .....|.++.+|+.+++..| ++.+...+|.++..|+.+.+..
T Consensus 142 ~~~~~~~--~~~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~ 217 (394)
T 4fs7_A 142 KEITIPE--GVTVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPN 217 (394)
T ss_dssp SEEECCT--TCCEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCT
T ss_pred cccccCc--cccccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCC
Confidence 2221111 112233445666666666666544322 34445555666666666554 3334445556666666555554
Q ss_pred CcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhcccccceecccccccCCCCC
Q 047739 472 NAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIP 551 (1099)
Q Consensus 472 N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 551 (1099)
+... +...+.....|+.+.+..+ ++......+.++..|+.+.+..+... .....|..+..++.+....+.+ ..
T Consensus 218 ~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~ 290 (394)
T 4fs7_A 218 SLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PE 290 (394)
T ss_dssp TCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CT
T ss_pred CceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceee---cc
Confidence 4332 1222333445566555433 22233444555555666655554333 3344555555555555544332 12
Q ss_pred CcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccCcccEEeccCccccccCCcccCCCCC
Q 047739 552 ATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSS 631 (1099)
Q Consensus 552 ~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 631 (1099)
..|..+.+|+.+.+..+ ++.+-..+|.++.+|+.++|..+ ++..-...|.++.+|+.+++..| ++..-...|..|++
T Consensus 291 ~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~ 367 (394)
T 4fs7_A 291 KTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCIN 367 (394)
T ss_dssp TTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTT
T ss_pred ccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCC
Confidence 33444555555555433 33233345555555555555432 43233345555555555555544 43233345555555
Q ss_pred CCEEECcCccccccCChhhhccCCCC
Q 047739 632 LRSLLVNSNHLSGGIPDSLAKLSNLA 657 (1099)
Q Consensus 632 L~~L~Ls~N~l~~~~p~~l~~l~~L~ 657 (1099)
|+.+++..+ ++ .+..+|.++++|+
T Consensus 368 L~~i~lp~~-~~-~~~~~F~~c~~L~ 391 (394)
T 4fs7_A 368 LKKVELPKR-LE-QYRYDFEDTTKFK 391 (394)
T ss_dssp CCEEEEEGG-GG-GGGGGBCTTCEEE
T ss_pred CCEEEECCC-CE-EhhheecCCCCCc
Confidence 555555433 22 2233444444444
No 387
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.56 E-value=1.7e-14 Score=146.55 Aligned_cols=133 Identities=19% Similarity=0.231 Sum_probs=98.7
Q ss_pred cceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccCcccEEeccC
Q 047739 536 LRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSI 615 (1099)
Q Consensus 536 L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 615 (1099)
.+.+++++|.++. +|..+ .++|+.|++++|++++..+..++++++|++|+|++|++++..+..+..+++|+.|++++
T Consensus 9 ~~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 4566777777663 33332 25677777777777766666677888888888888888865555678888888888888
Q ss_pred ccccccCCcccCCCCCCCEEECcCccccccCChhhhccCCCCeeecCCCcCCCcCC
Q 047739 616 NNLTGEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLSGEIP 671 (1099)
Q Consensus 616 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p 671 (1099)
|++++..+..+..+++|++|+|++|++++..+..+..+++|+.|++++|++++..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 88886655667788888888888888886555567788888888888888887554
No 388
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.56 E-value=2.1e-14 Score=147.89 Aligned_cols=127 Identities=21% Similarity=0.312 Sum_probs=75.6
Q ss_pred eEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccCC
Q 047739 297 QVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEGN 376 (1099)
Q Consensus 297 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N 376 (1099)
+.+++++|+++. +|..+. ++|++|+|++|.|+ .+|..|.++++|++|+|++|.+++..+..|..+++|++|+|++|
T Consensus 13 ~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLKV-LPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCCc-CCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 356666666663 333222 45666666666665 45566666666666666666666555556666666666666666
Q ss_pred cCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCc
Q 047739 377 RFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLS 427 (1099)
Q Consensus 377 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 427 (1099)
+|++..|..|..+++|++|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 666555555555655555555555555555555555556666666655554
No 389
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.55 E-value=1e-13 Score=160.29 Aligned_cols=219 Identities=16% Similarity=0.153 Sum_probs=109.7
Q ss_pred CccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCC
Q 047739 359 PVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMN 438 (1099)
Q Consensus 359 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 438 (1099)
..+|.+|++|+.+.+..+. .......|.++.+|+.+.+..| ++.+...+|.++..|+.+.+..+... +.+......
T Consensus 155 ~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~ 230 (394)
T 4fs7_A 155 DEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKT 230 (394)
T ss_dssp TTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTC
T ss_pred hhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccC
Confidence 4456666666666665443 2233445666666666666554 44455566666666666666554432 223333445
Q ss_pred CCCEEEccCCcCccccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeec
Q 047739 439 NLSTLDLSENKFSGEVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQ 518 (1099)
Q Consensus 439 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~ 518 (1099)
+|+.+.+..+ ++.+....+.++..|+.+.+..+... .....|.++..++.+....+.+. ...+..+.+|+.+.+.
T Consensus 231 ~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~ 305 (394)
T 4fs7_A 231 GVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLL 305 (394)
T ss_dssp CCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEEC
T ss_pred CCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccc
Confidence 6666666543 23244455566666666666655433 44455666666666665544322 2345555556655554
Q ss_pred cccccCCCchhhhcccccceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEe
Q 047739 519 ENKLSGNVPEGFSSLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLEL 589 (1099)
Q Consensus 519 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L 589 (1099)
++ ++.+...+|.++.+|+.+++..+ ++......|.++.+|+.+++..+ ++..-..+|.+|++|+.+++
T Consensus 306 ~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~l 373 (394)
T 4fs7_A 306 DS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVEL 373 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEE
T ss_pred cc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEE
Confidence 43 33334445555555555555422 33233334444444444444333 22222333444444444444
No 390
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.54 E-value=4.7e-14 Score=143.27 Aligned_cols=132 Identities=19% Similarity=0.246 Sum_probs=87.4
Q ss_pred eeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccC
Q 047739 296 LQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEG 375 (1099)
Q Consensus 296 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~ 375 (1099)
.+.+++++|+++.+ |..+ .++|++|++++|++++..+..|+++++|++|+|++|++++..+..+..+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTSV-PTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSSC-CTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCccC-CCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 35666677776643 3222 25677777777777765556667777777777777777765555667777777777777
Q ss_pred CcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCcccc
Q 047739 376 NRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSL 430 (1099)
Q Consensus 376 N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 430 (1099)
|++++..+..+..+++|++|++++|++++..+..|.++++|++|+|++|.+.+..
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 7777555555666666777777766666655555666677777777777766543
No 391
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.54 E-value=5.8e-15 Score=165.29 Aligned_cols=135 Identities=11% Similarity=0.106 Sum_probs=99.1
Q ss_pred cccccccccccceeEEEEEECCceEEEEEECCCCCcc---------------HHH--------HHHHHHHhhhccCCcce
Q 047739 805 FDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLD---------------ENL--------FRKEAEFLGKVRHRNLT 861 (1099)
Q Consensus 805 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~---------------~~~--------~~~E~~~l~~l~H~niv 861 (1099)
|++.+.||+|+||.||+|...+|+.||||.+...... ... ..+|...+.++.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 8899999999999999999999999999986432110 111 23567777777555442
Q ss_pred EEeeEEecCCCceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCEEECCCC
Q 047739 862 VLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNVLFDADF 941 (1099)
Q Consensus 862 ~l~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NIll~~~~ 941 (1099)
...-+.. . . .++||||++++.|.++... .....++.|++.+|.|||+.|||||||||.|||+++++
T Consensus 177 vp~p~~~-~-~-~~LVME~i~G~~L~~l~~~-----------~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 177 VPEPIAQ-S-R-HTIVMSLVDALPMRQVSSV-----------PDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEK 242 (397)
T ss_dssp CCCEEEE-E-T-TEEEEECCSCEEGGGCCCC-----------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEE
T ss_pred CCeeeec-c-C-ceEEEEecCCccHhhhccc-----------HHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCC
Confidence 2211111 1 1 2799999998887654321 12345789999999999999999999999999998776
Q ss_pred ----------cEEEeccccccc
Q 047739 942 ----------EAHLSDFGLDRL 953 (1099)
Q Consensus 942 ----------~~kl~DfGla~~ 953 (1099)
.+.|+||+-+..
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEE
T ss_pred CcccccccccceEEEEeCCccc
Confidence 389999997764
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=1.5e-16 Score=165.09 Aligned_cols=149 Identities=21% Similarity=0.301 Sum_probs=88.6
Q ss_pred ccccceEEccCCccCcccCc------ccccCCcccEEEeccccCCCccCcccccCCCCceeecccccCCCcccCCcc--c
Q 047739 89 LRMLRKLSLRSNSFNGTIPA------TLAQCTLLRAVFLQYNSLSGNLPANIGNLSNLEILNVAANRLSGEIANDLP--R 160 (1099)
Q Consensus 89 l~~L~~L~L~~n~~~~~~p~------~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ls~N~l~~~i~~~~~--~ 160 (1099)
...++.++|+.|.+.|.+|. .++.+++|++|+|++|++++ +| .++.+++|++|+|++|.++ .+|..+. +
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 34444445555555544444 45555555555555555554 44 4555555555555555554 3333222 4
Q ss_pred ccceeeCCCCccCCCCCCCCccccccccccccccccccccccccccccC--ccccccCceeEEEccCCcCCccChh----
Q 047739 161 NLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLP--SAIANCSSLVHLSAQGNALGGVIPP---- 234 (1099)
Q Consensus 161 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp--~~l~~l~~L~~L~l~~N~l~~~~p~---- 234 (1099)
+|++|+|++|++++ +| .++.+++|++|++++|+++. +| ..+..+++|++|++++|.+.+..|.
T Consensus 94 ~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~---------~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~ 162 (198)
T 1ds9_A 94 TLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITN---------WGEIDKLAALDKLEDLLLAGNPLYNDYKENNAT 162 (198)
T ss_dssp HCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCC---------HHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTH
T ss_pred cCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCc---------hhHHHHHhcCCCCCEEEecCCccccccccccch
Confidence 55555555555554 34 46777888888888887762 22 2566777888888888888766554
Q ss_pred ------hhcCCCCccEEEcccccCC
Q 047739 235 ------AIGALPKLQVVSLAQNNLS 253 (1099)
Q Consensus 235 ------~~~~l~~L~~L~Ls~N~l~ 253 (1099)
.+..+++|++|| +|.++
T Consensus 163 ~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 163 SEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred HHHHHHHHHhCCCcEEEC--CcccC
Confidence 377888888886 56554
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.50 E-value=4.1e-16 Score=161.73 Aligned_cols=153 Identities=25% Similarity=0.314 Sum_probs=104.1
Q ss_pred CCccceeeeccccccCCCch------hhhcccccceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCC
Q 047739 509 LPNLQVIALQENKLSGNVPE------GFSSLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCS 582 (1099)
Q Consensus 509 l~~L~~L~L~~N~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~ 582 (1099)
...++.++++.+.+++..|. .|..+++|++|++++|.+++ +| .+..+++|+.|++++|+++ .+|..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 34445555555555544443 67777777777777777765 44 6677777777777777776 5666666667
Q ss_pred CCceEEecCCcccCcCCcchhccCcccEEeccCccccccCC-cccCCCCCCCEEECcCccccccCChh----------hh
Q 047739 583 DLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIP-DEISKCSSLRSLLVNSNHLSGGIPDS----------LA 651 (1099)
Q Consensus 583 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~----------l~ 651 (1099)
+|++|+|++|++++ +| .+..+++|+.|++++|++++..+ ..+..+++|++|++++|++++.+|.. +.
T Consensus 94 ~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~ 171 (198)
T 1ds9_A 94 TLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVK 171 (198)
T ss_dssp HCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHH
T ss_pred cCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHH
Confidence 77888888887774 44 57777888888888888774221 36777788888888888877655542 67
Q ss_pred ccCCCCeeecCCCcCCC
Q 047739 652 KLSNLAVLDLSANNLSG 668 (1099)
Q Consensus 652 ~l~~L~~L~ls~N~l~~ 668 (1099)
.+++|+.|| +|.++.
T Consensus 172 ~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 172 RLPNLKKLD--GMPVDV 186 (198)
T ss_dssp HCSSCSEEC--CGGGTT
T ss_pred hCCCcEEEC--CcccCH
Confidence 777888776 666653
No 394
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.49 E-value=3.4e-14 Score=144.16 Aligned_cols=132 Identities=21% Similarity=0.193 Sum_probs=99.3
Q ss_pred hhcccccceecccccccCCCCCCccccc-ceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccCcc
Q 047739 530 FSSLMSLRYLNLSFNGFVGQIPATFSFL-RSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHL 608 (1099)
Q Consensus 530 ~~~l~~L~~L~Ls~N~l~~~~~~~l~~l-~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 608 (1099)
+..+.+|+.|++++|.++. ++. +..+ ++|+.|++++|++++. ..++.+++|++|+|++|++++..+..+..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 4455667777777777763 343 3333 3777777777777754 567888888999999998885444445888899
Q ss_pred cEEeccCccccccCCc--ccCCCCCCCEEECcCccccccCChh----hhccCCCCeeecCCCcCC
Q 047739 609 NVLDLSINNLTGEIPD--EISKCSSLRSLLVNSNHLSGGIPDS----LAKLSNLAVLDLSANNLS 667 (1099)
Q Consensus 609 ~~L~Ls~N~l~~~~p~--~l~~l~~L~~L~Ls~N~l~~~~p~~----l~~l~~L~~L~ls~N~l~ 667 (1099)
+.|+|++|+++ .+|. .+..+++|+.|++++|+++ .+|.. +..+++|+.||+++|...
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 99999999886 5666 7888889999999999987 55664 888899999999888765
No 395
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.45 E-value=9.1e-14 Score=140.94 Aligned_cols=132 Identities=17% Similarity=0.216 Sum_probs=67.3
Q ss_pred ccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCC
Q 047739 362 IKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLS 441 (1099)
Q Consensus 362 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 441 (1099)
+.++.+|++|+|++|+++ .+|......++|++|++++|.+++. ..|.++++|++|+|++|++++..+..+..+++|+
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred cCCcCCceEEEeeCCCCc-hhHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 334455555555555555 2333222222555555555555543 4555566666666666666643334445666666
Q ss_pred EEEccCCcCccccCc--ccCCCCcccEEEccCCcCCCcCCCC----CCCCCCCCEEEeccCcC
Q 047739 442 TLDLSENKFSGEVPA--SIGNLSQLMVFNLSGNAFSGRIPAS----LGNLLKLTTLDLSKQNF 498 (1099)
Q Consensus 442 ~L~Ls~N~l~~~~~~--~l~~l~~L~~L~L~~N~l~~~~~~~----l~~l~~L~~L~L~~n~l 498 (1099)
+|+|++|.++ .+|. .+..+++|+.|++++|.++ .+|.. +..+++|+.||+++|.+
T Consensus 92 ~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 92 ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred EEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCH
Confidence 6666666664 2332 4555555555555555554 23332 44455555555555444
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.39 E-value=7.5e-13 Score=133.14 Aligned_cols=107 Identities=18% Similarity=0.240 Sum_probs=91.1
Q ss_pred CceeecccccCCCcccCCcccccceeeCCCCccCCCCCCCCccccccccccccccccccccccccccccCccccccCcee
Q 047739 140 LEILNVAANRLSGEIANDLPRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSLV 219 (1099)
Q Consensus 140 L~~L~ls~N~l~~~i~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l~~l~~L~ 219 (1099)
.+++++++|.++. +|..++++|++|+|++|+|++..|..|.++++|++|+|++|+|+++.+ ..+..+++|+
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~--------~~f~~l~~L~ 81 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPA--------GVFDKLTQLT 81 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCT--------TTTTTCTTCC
T ss_pred CCEEEeCCCCcCc-cCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccCh--------hhccCCCCCC
Confidence 4677777777764 777778889999999999998889999999999999999999984332 2346788999
Q ss_pred EEEccCCcCCccChhhhcCCCCccEEEcccccCCCc
Q 047739 220 HLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSGV 255 (1099)
Q Consensus 220 ~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 255 (1099)
+|+|++|+|+++.+.+|..+++|++|+|++|.++..
T Consensus 82 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 82 QLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred EEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 999999999988888899999999999999999854
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.39 E-value=1.2e-12 Score=131.76 Aligned_cols=107 Identities=26% Similarity=0.293 Sum_probs=76.8
Q ss_pred eeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccCcccEEeccCccccccCCcccCCCCCCCEEECcC
Q 047739 560 VVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNS 639 (1099)
Q Consensus 560 L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 639 (1099)
.+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 345666666666 3555443 6777777777777766677777777788888888887755555567778888888888
Q ss_pred ccccccCChhhhccCCCCeeecCCCcCCCc
Q 047739 640 NHLSGGIPDSLAKLSNLAVLDLSANNLSGE 669 (1099)
Q Consensus 640 N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~ 669 (1099)
|+|++..+..|.++++|+.|+|++|++++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 888765566677888888888888887754
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.37 E-value=1.3e-12 Score=131.95 Aligned_cols=104 Identities=22% Similarity=0.335 Sum_probs=90.6
Q ss_pred ceeecccccCCCcccCCcccccceeeCCCCccCCCCCCCCccccccccccccccccccccccccccccCcc-ccccCcee
Q 047739 141 EILNVAANRLSGEIANDLPRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPATFEGTLPSA-IANCSSLV 219 (1099)
Q Consensus 141 ~~L~ls~N~l~~~i~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~-l~~l~~L~ 219 (1099)
+.+++++|+++ .+|..++++|++|+|++|+|++..|..|+++++|++|+|++|+|++ +|.. ++.+++|+
T Consensus 15 ~~l~~~~n~l~-~iP~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~---------i~~~~~~~l~~L~ 84 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA---------IPTGVFDKLTQLT 84 (174)
T ss_dssp SEEECCSSCCS-SCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC---------CCTTTTTTCTTCC
T ss_pred cEEEeCCCCCC-ccCCCcCCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCc---------cChhHhCCcchhh
Confidence 67788888874 6777888899999999999998889999999999999999999983 4443 46789999
Q ss_pred EEEccCCcCCccChhhhcCCCCccEEEcccccCCC
Q 047739 220 HLSAQGNALGGVIPPAIGALPKLQVVSLAQNNLSG 254 (1099)
Q Consensus 220 ~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 254 (1099)
+|+|++|+|+++.+.+|..+++|++|+|++|.+..
T Consensus 85 ~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 85 QLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred EEECCCCccceeCHHHhccccCCCEEEeCCCCccc
Confidence 99999999998888889999999999999999974
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.35 E-value=2.8e-12 Score=129.42 Aligned_cols=105 Identities=25% Similarity=0.295 Sum_probs=71.6
Q ss_pred eEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccCcccEEeccCccccccCCcccCCCCCCCEEECcCc
Q 047739 561 VVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSN 640 (1099)
Q Consensus 561 ~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 640 (1099)
+.+++++|+++ .+|..+. ++|++|+|++|++++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45566666665 4555443 56777777777777666667777777777777777777544444567777777777777
Q ss_pred cccccCChhhhccCCCCeeecCCCcCCC
Q 047739 641 HLSGGIPDSLAKLSNLAVLDLSANNLSG 668 (1099)
Q Consensus 641 ~l~~~~p~~l~~l~~L~~L~ls~N~l~~ 668 (1099)
+|++..+..|..+++|+.|+|++|++..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc
Confidence 7775545557777777777777777764
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.34 E-value=6e-11 Score=136.89 Aligned_cols=156 Identities=8% Similarity=0.079 Sum_probs=70.4
Q ss_pred chhccCCC-CccEEeCCCCccccCchhhhCCCCCCCEEEccCCc---cCccCCccccCCCCCCEEEccCCcCCCCCCccc
Q 047739 311 PLWLTRAS-TLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNS---FGGAVPVEIKQCSSLSLLDLEGNRFSGEIPEFL 386 (1099)
Q Consensus 311 ~~~~~~l~-~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~---l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 386 (1099)
..+|.++. .|+.+.+..+ ++.+...+|.++.+|+.+.+..|. ++..... +|
T Consensus 56 ~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~------------------------aF 110 (394)
T 4gt6_A 56 DRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQ------------------------AF 110 (394)
T ss_dssp TTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTT------------------------TT
T ss_pred HhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechh------------------------hc
Confidence 33444442 3555555433 443444455555555555554432 3322333 44
Q ss_pred cCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccccCcccCCCCcccE
Q 047739 387 GDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGEVPASIGNLSQLMV 466 (1099)
Q Consensus 387 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~ 466 (1099)
.++.+|+.+.+..+ ++.+...+|.++.+|+.+.+..+- .......|.++.+|+.+.+..+ ++.+...+|.+ ..|+.
T Consensus 111 ~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~~-~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~ 186 (394)
T 4gt6_A 111 MFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEGV-TSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQ 186 (394)
T ss_dssp TTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSE
T ss_pred hhcccceeeccCCc-cceehhhhhhhhccccccccccee-eeecccceecccccccccccce-eeEeccccccc-cceeE
Confidence 44444444444332 333344445555555555554322 2233344555555555555443 22233334432 34555
Q ss_pred EEccCCcCCCcCCCCCCCCCCCCEEEeccC
Q 047739 467 FNLSGNAFSGRIPASLGNLLKLTTLDLSKQ 496 (1099)
Q Consensus 467 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n 496 (1099)
+.+..+-.. .....|.++..++......+
T Consensus 187 i~ip~~~~~-i~~~af~~c~~l~~~~~~~~ 215 (394)
T 4gt6_A 187 IHIPAKVTR-IGTNAFSECFALSTITSDSE 215 (394)
T ss_dssp EEECTTCCE-ECTTTTTTCTTCCEEEECCS
T ss_pred EEECCcccc-cccchhhhccccceeccccc
Confidence 555443322 33444555555555554443
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.32 E-value=8.4e-11 Score=135.66 Aligned_cols=151 Identities=11% Similarity=0.134 Sum_probs=100.6
Q ss_pred CceeEEEcCCCccccCcchhccCCCCccEEeCCCCc---cccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCE
Q 047739 294 SVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNS---ISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSL 370 (1099)
Q Consensus 294 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~---i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 370 (1099)
..|+.+.+-.+ ++.+-..+|.++.+|+.+.++.|. ++.+...+|.++.+|+.+.+..+ ++......|..+.+|+.
T Consensus 64 ~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~ 141 (394)
T 4gt6_A 64 YVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDT 141 (394)
T ss_dssp SCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCE
T ss_pred CcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccc
Confidence 45788888654 776777889999999999998774 66556778999999998887655 44456677888888888
Q ss_pred EEccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcC
Q 047739 371 LDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKF 450 (1099)
Q Consensus 371 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 450 (1099)
+.+..+. .......|..+.+|+.+.+..+ ++.+...+|.+ .+|+.+.+..+-.. ....+|.++.+++......+..
T Consensus 142 i~lp~~~-~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~ 217 (394)
T 4gt6_A 142 VTIPEGV-TSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESY 217 (394)
T ss_dssp EECCTTC-CEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSS
T ss_pred cccccee-eeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhccccceeccccccc
Confidence 8886543 3244556667777777777654 44344455544 45666666554332 3445555566666655544433
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.27 E-value=1.5e-13 Score=156.43 Aligned_cols=158 Identities=18% Similarity=0.192 Sum_probs=82.1
Q ss_pred CceeEEEcCCCccccCcchhccC-----CCCccEEeCCCCccccCchhhhC-CCCCCCEEEccCCccCccCCccc-----
Q 047739 294 SVLQVLDLQQNQIRGAFPLWLTR-----ASTLTRLDVSGNSISGKIPAQIG-GLWRLEELKMANNSFGGAVPVEI----- 362 (1099)
Q Consensus 294 ~~L~~L~L~~n~l~~~~~~~~~~-----l~~L~~L~Ls~N~i~~~~p~~~~-~l~~L~~L~L~~n~l~~~~~~~l----- 362 (1099)
+.|++|+|++|.|+......+.. .++|++|||++|.|+......+. .+.+|++|+|++|.++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 45777777777776533333322 25777777777777643333332 34566777777776664433333
Q ss_pred cCCCCCCEEEccCCcCCCC----CCccccCCCCCCeeeccCcccccc----CCccCCCCCCCCEEEcccCcCccc----c
Q 047739 363 KQCSSLSLLDLEGNRFSGE----IPEFLGDIRGLKSLTLAANLFSGS----IPASFRNLPGLENLNLRHNSLSGS----L 430 (1099)
Q Consensus 363 ~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~ 430 (1099)
...++|++|+|++|.|+.. ++..+..+++|++|+|++|.|+.. ++..+...++|++|+|++|.|++. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 2345666666666666531 223334455555555555555421 133344444555555555555432 1
Q ss_pred chhhhCCCCCCEEEccCCcCc
Q 047739 431 PEEVLGMNNLSTLDLSENKFS 451 (1099)
Q Consensus 431 ~~~~~~l~~L~~L~Ls~N~l~ 451 (1099)
...+...++|++|+|++|.|+
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCC
T ss_pred HHHHHhCCCCCEEeccCCCCC
Confidence 222233445555555555554
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.25 E-value=2.4e-13 Score=154.77 Aligned_cols=187 Identities=20% Similarity=0.197 Sum_probs=88.3
Q ss_pred CceeEEEccCCcCCccChhhhcC-----CCCccEEEcccccCCCccCcccccccCCCCCcceEEEeccccccccCCCCCC
Q 047739 216 SSLVHLSAQGNALGGVIPPAIGA-----LPKLQVVSLAQNNLSGVVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETG 290 (1099)
Q Consensus 216 ~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~ 290 (1099)
+.|++|+|++|.++......+.. .++|++|+|++|.++..-...++.
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~---------------------------- 123 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLP---------------------------- 123 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHH----------------------------
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHH----------------------------
Confidence 45666777777666443333322 256666666666665321111111
Q ss_pred CCCCceeEEEcCCCccccCcchhc-----cCCCCccEEeCCCCccccC----chhhhCCCCCCCEEEccCCccCcc----
Q 047739 291 SCSSVLQVLDLQQNQIRGAFPLWL-----TRASTLTRLDVSGNSISGK----IPAQIGGLWRLEELKMANNSFGGA---- 357 (1099)
Q Consensus 291 ~~~~~L~~L~L~~n~l~~~~~~~~-----~~l~~L~~L~Ls~N~i~~~----~p~~~~~l~~L~~L~L~~n~l~~~---- 357 (1099)
.+.+|++|+|++|+|+......+ ...++|++|+|++|.|+.. ++..+..+++|++|+|++|.+++.
T Consensus 124 -~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~ 202 (372)
T 3un9_A 124 -VFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLEL 202 (372)
T ss_dssp -HHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHH
T ss_pred -HHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHH
Confidence 12235556666665553322222 2345566666666666432 223334555556666655555432
Q ss_pred CCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCC
Q 047739 358 VPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGM 437 (1099)
Q Consensus 358 ~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 437 (1099)
+...+..+++|++|+|++|.|++.... .+...+...++|++|+|++|.|++.....+..+
T Consensus 203 L~~~L~~~~~L~~L~Ls~N~i~~~g~~--------------------~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~ 262 (372)
T 3un9_A 203 LAAQLDRNRQLQELNVAYNGAGDTAAL--------------------ALARAAREHPSLELLHLYFNELSSEGRQVLRDL 262 (372)
T ss_dssp HHHHGGGCSCCCEEECCSSCCCHHHHH--------------------HHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHC
T ss_pred HHHHHhcCCCcCeEECCCCCCCHHHHH--------------------HHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHH
Confidence 133344445555555555555421111 122233344566667777776665544444433
Q ss_pred C-----CCCEEE--ccCCcCc
Q 047739 438 N-----NLSTLD--LSENKFS 451 (1099)
Q Consensus 438 ~-----~L~~L~--Ls~N~l~ 451 (1099)
. .|+.+. +..|.++
T Consensus 263 ~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 263 GGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp C------CEEECCCC----CH
T ss_pred hcCCCccchhhHhhhcCCccC
Confidence 1 155555 5555554
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.22 E-value=1.5e-11 Score=139.39 Aligned_cols=107 Identities=20% Similarity=0.182 Sum_probs=86.2
Q ss_pred CcccceEecCCcEeEEecCCCccccccccccccccccceEEccC-CccCcccCcccccCCcccEEEeccccCCCccCccc
Q 047739 56 CDWRGVACTNNRVTELRLPRLQLSGRISDHLSNLRMLRKLSLRS-NSFNGTIPATLAQCTLLRAVFLQYNSLSGNLPANI 134 (1099)
Q Consensus 56 c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~-n~~~~~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~ 134 (1099)
|.|.+|.|++. ++|.+ ||+ +.+++.|+.|+|++ |.+++..|..|+.|++|++|+|++|+|++.+|..|
T Consensus 8 C~~~~v~~~~~---------n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 76 (347)
T 2ifg_A 8 HGSSGLRCTRD---------GALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAF 76 (347)
T ss_dssp SSSSCEECCSS---------CCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGG
T ss_pred ccCCEEEcCCC---------CCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHh
Confidence 99999999752 13443 777 99999999999996 99998878899999999999999999999999999
Q ss_pred ccCCCCceeecccccCCCcccCCcc-cccceeeCCCCccC
Q 047739 135 GNLSNLEILNVAANRLSGEIANDLP-RNLKYFDLSSNGFS 173 (1099)
Q Consensus 135 ~~l~~L~~L~ls~N~l~~~i~~~~~-~~L~~L~ls~N~l~ 173 (1099)
+++++|++|+|++|+|++..+..+. ..|+.|+|++|.|.
T Consensus 77 ~~l~~L~~L~l~~N~l~~~~~~~~~~~~L~~l~l~~N~~~ 116 (347)
T 2ifg_A 77 HFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLH 116 (347)
T ss_dssp GSCSCCCEEECCSSCCSCCCSTTTCSCCCCEEECCSSCCC
T ss_pred cCCcCCCEEeCCCCccceeCHHHcccCCceEEEeeCCCcc
Confidence 9999999999999998854433322 23666666666655
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.15 E-value=4e-11 Score=135.89 Aligned_cols=101 Identities=24% Similarity=0.217 Sum_probs=51.9
Q ss_pred EccCC-cCCCCCCCCCCCCCCCceEEecC-CcccCcCCcchhccCcccEEeccCccccccCCcccCCCCCCCEEECcCcc
Q 047739 564 SFSGN-HISGSIPPELGNCSDLEVLELRS-NSLTGHIPTDISHLSHLNVLDLSINNLTGEIPDEISKCSSLRSLLVNSNH 641 (1099)
Q Consensus 564 ~ls~N-~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 641 (1099)
+.+++ +++ .+|. +..+++|++|+|++ |+|++..+..|+.|++|+.|+|++|+|++..|..|..+++|+.|+|++|+
T Consensus 14 ~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 91 (347)
T 2ifg_A 14 RCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA 91 (347)
T ss_dssp ECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred EcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCc
Confidence 44444 444 3444 55555555555553 55554444455555555555555555555444555555555555555555
Q ss_pred ccccCChhhhccCCCCeeecCCCcCC
Q 047739 642 LSGGIPDSLAKLSNLAVLDLSANNLS 667 (1099)
Q Consensus 642 l~~~~p~~l~~l~~L~~L~ls~N~l~ 667 (1099)
|++..+..+..++ |+.|+|++|++.
T Consensus 92 l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 92 LESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred cceeCHHHcccCC-ceEEEeeCCCcc
Confidence 5543333343333 555555555554
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.07 E-value=2.9e-10 Score=123.27 Aligned_cols=142 Identities=10% Similarity=0.028 Sum_probs=109.7
Q ss_pred HHHHhccccccccccccceeEEEEEECCceEEEEEECCCCC-ccHHHHHHHHHHhhhcc-CCcceEEeeEEecCCCceEE
Q 047739 799 VEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGS-LDENLFRKEAEFLGKVR-HRNLTVLRGYYAGAPDLRLL 876 (1099)
Q Consensus 799 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~l 876 (1099)
......|+.....+.|+.+.||++... +..+++|...... .....+.+|+++++.+. +..+.++++++.. ....|+
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~-~~~~~l 87 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERH-DGWSNL 87 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE-TTEEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEec-CCceEE
Confidence 344567888888999999999999865 6788899875421 23356899999999985 6677788888774 445699
Q ss_pred EEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHcc----------------------------------
Q 047739 877 VYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHT---------------------------------- 922 (1099)
Q Consensus 877 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~---------------------------------- 922 (1099)
||||++|.++.+.+. +......++.+++++++.||+
T Consensus 88 v~e~i~G~~l~~~~~----------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (263)
T 3tm0_A 88 LMSEADGVLCSEEYE----------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCEN 157 (263)
T ss_dssp EEECCSSEEHHHHCC----------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGG
T ss_pred EEEecCCeehhhccC----------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccc
Confidence 999999988876532 111234678899999999998
Q ss_pred -------------------------CCceecCCCCCCEEECCCCcEEEecccccc
Q 047739 923 -------------------------SNMVHGDIKPQNVLFDADFEAHLSDFGLDR 952 (1099)
Q Consensus 923 -------------------------~~iiH~Dlk~~NIll~~~~~~kl~DfGla~ 952 (1099)
..++|+|+++.||+++++..+.|+||+.+.
T Consensus 158 ~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 158 WEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp GSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 348999999999999876667799999764
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.03 E-value=1.5e-08 Score=116.22 Aligned_cols=108 Identities=13% Similarity=0.160 Sum_probs=49.2
Q ss_pred hhcccccceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccCccc
Q 047739 530 FSSLMSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLN 609 (1099)
Q Consensus 530 ~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 609 (1099)
|.++..|+.+.+..+ ++......|..+.+|+.+.+..+ +.......|.++++|+.+.+.++.++..-...|.++.+|+
T Consensus 236 f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~ 313 (379)
T 4h09_A 236 FYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLS 313 (379)
T ss_dssp TTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCC
T ss_pred ccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCC
Confidence 333444444444332 22233333444444444444322 2222233455555555555555555433344555555566
Q ss_pred EEeccCccccccCCcccCCCCCCCEEECcCc
Q 047739 610 VLDLSINNLTGEIPDEISKCSSLRSLLVNSN 640 (1099)
Q Consensus 610 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 640 (1099)
.++|..+ ++..-...|.+|.+|+.+.+..+
T Consensus 314 ~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 314 SVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp EEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred EEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 6555533 33222344555666666655443
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.99 E-value=2.5e-08 Score=114.25 Aligned_cols=310 Identities=11% Similarity=0.057 Sum_probs=159.4
Q ss_pred CceeEEEcCCCccccCcchhccCCCCccEEeCCCCccccCchhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEc
Q 047739 294 SVLQVLDLQQNQIRGAFPLWLTRASTLTRLDVSGNSISGKIPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDL 373 (1099)
Q Consensus 294 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 373 (1099)
.+|+.+.+.. .++.+-..+|.++.+|+.++|..+ ++.+...+|.++ +|+.+.+..+ +.......|..+ +|+.+++
T Consensus 46 ~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L~~i~l 120 (379)
T 4h09_A 46 DRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DLDDFEF 120 (379)
T ss_dssp GGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CCSEEEC
T ss_pred cCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-CcccccC
Confidence 3455555542 345455566777777777777644 554555667665 5666666543 333344445443 6777777
Q ss_pred cCCcCCCCCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEcccCcCccccchhhhCCCCCCEEEccCCcCccc
Q 047739 374 EGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNLRHNSLSGSLPEEVLGMNNLSTLDLSENKFSGE 453 (1099)
Q Consensus 374 s~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 453 (1099)
..+- +......|.+. +|+...+..+ ++.+....|.++.+++.+.+..+.........+.. +.. ..
T Consensus 121 p~~~-~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~-----------~~~-~~ 185 (379)
T 4h09_A 121 PGAT-TEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLY-----------NKN-KT 185 (379)
T ss_dssp CTTC-CEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEE-----------ETT-SS
T ss_pred CCcc-ccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceec-----------ccc-cc
Confidence 6542 21223334333 4555555433 33455566666677777666554432111110000 000 01
Q ss_pred cCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCcCcccCCcccCCCCccceeeeccccccCCCchhhhcc
Q 047739 454 VPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQNFSGELPIELAGLPNLQVIALQENKLSGNVPEGFSSL 533 (1099)
Q Consensus 454 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 533 (1099)
....+.....+..+.+..+... .....+..+.+|+.+.+..+ +.......+.++..|+.+.+..+ ++.+...+|.++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~ 262 (379)
T 4h09_A 186 ILESYPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNC 262 (379)
T ss_dssp EEEECCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTC
T ss_pred eeccccccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCcccccee
Confidence 1122333334444443333222 33344555555665555443 33344445555566666666544 333444556666
Q ss_pred cccceecccccccCCCCCCcccccceeeEEEccCCcCCCCCCCCCCCCCCCceEEecCCcccCcCCcchhccCcccEEec
Q 047739 534 MSLRYLNLSFNGFVGQIPATFSFLRSVVVLSFSGNHISGSIPPELGNCSDLEVLELRSNSLTGHIPTDISHLSHLNVLDL 613 (1099)
Q Consensus 534 ~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 613 (1099)
.+|+.+.+..+ +.......|..+.+|+.+.+.++.++......|.+|.+|+.+.|..+ ++..-...|.++.+|+.+.+
T Consensus 263 ~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~i 340 (379)
T 4h09_A 263 TALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISY 340 (379)
T ss_dssp TTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCC
T ss_pred ehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEE
Confidence 66666666433 44344455666666666666666666445556777777777777543 44333456677777777777
Q ss_pred cCccccccCCcccCCC
Q 047739 614 SINNLTGEIPDEISKC 629 (1099)
Q Consensus 614 s~N~l~~~~p~~l~~l 629 (1099)
..+ ++..-...|.++
T Consensus 341 p~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 341 PKS-ITLIESGAFEGS 355 (379)
T ss_dssp CTT-CCEECTTTTTTS
T ss_pred CCc-cCEEchhHhhCC
Confidence 554 442233445444
No 409
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.97 E-value=1.2e-11 Score=132.15 Aligned_cols=160 Identities=19% Similarity=0.186 Sum_probs=96.4
Q ss_pred CCcccceEecC--CcEeEEecCC---Cccccccccc-cccccccceEEccCCccCcccCc-ccccCCcccE--EEecccc
Q 047739 55 PCDWRGVACTN--NRVTELRLPR---LQLSGRISDH-LSNLRMLRKLSLRSNSFNGTIPA-TLAQCTLLRA--VFLQYNS 125 (1099)
Q Consensus 55 ~c~w~gv~c~~--~~v~~l~l~~---~~l~g~~~~~-l~~l~~L~~L~L~~n~~~~~~p~-~~~~l~~L~~--L~l~~n~ 125 (1099)
.|.|.|+.|+. .||+.+..++ ..+.|.+.++ +..++. .|..+.|..++.++- .+...+.|+. ++++.|+
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 48999999985 4888877766 5667777643 455554 455555655555442 2555555555 5666663
Q ss_pred CC---CccCcccccCCCCceeecccccCCCcccCCcccccceeeCCCCccCCCCCCCCcccccccccccccccccccccc
Q 047739 126 LS---GNLPANIGNLSNLEILNVAANRLSGEIANDLPRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFSREVPA 202 (1099)
Q Consensus 126 l~---g~~p~~~~~l~~L~~L~ls~N~l~~~i~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~ 202 (1099)
.. +.++..-.++++|++|+||+|.|++.. .+|..++.+++|+.|+|++|+|++.
T Consensus 155 ~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~--------------------~l~~~~~~l~~L~~L~Ls~N~i~~~--- 211 (267)
T 3rw6_A 155 RSCMAATLRIIEENIPELLSLNLSNNRLYRLD--------------------DMSSIVQKAPNLKILNLSGNELKSE--- 211 (267)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEECTTSCCCCCG--------------------GGTTHHHHSTTCCEEECTTSCCCSG---
T ss_pred HHHHHHHHHHHHhhCCCCCEEECCCCCCCCCc--------------------cchhHHhhCCCCCEEECCCCccCCc---
Confidence 22 222222234455555555555444310 3455666777788888888877732
Q ss_pred ccccccCccccccC--ceeEEEccCCcCCccCh-------hhhcCCCCccEEE
Q 047739 203 TFEGTLPSAIANCS--SLVHLSAQGNALGGVIP-------PAIGALPKLQVVS 246 (1099)
Q Consensus 203 ~~~g~lp~~l~~l~--~L~~L~l~~N~l~~~~p-------~~~~~l~~L~~L~ 246 (1099)
..+..++ +|++|+|++|.+.+.+| ..+..+|+|+.||
T Consensus 212 -------~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 212 -------RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp -------GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred -------hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 1233333 78888888888876554 3467788888876
No 410
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.96 E-value=1.4e-09 Score=117.54 Aligned_cols=133 Identities=19% Similarity=0.150 Sum_probs=97.2
Q ss_pred ccccccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhccCCcc--eEEeeEEecCCCceEEEEeec
Q 047739 804 QFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNL--TVLRGYYAGAPDLRLLVYDYM 881 (1099)
Q Consensus 804 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni--v~l~~~~~~~~~~~~lV~e~~ 881 (1099)
++....+.+.|..+.||++...+|..+++|..... ....+.+|+++++.+++.++ .+++++.... +..++||||+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~-~~~~~v~e~i 97 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEA-GRDWLLLGEV 97 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECS-SCEEEEEECC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCC-CCCEEEEEec
Confidence 34444444566679999998877888999987543 33568899999999975554 4477776644 4469999999
Q ss_pred CCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCC-------------------------------------
Q 047739 882 PNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSN------------------------------------- 924 (1099)
Q Consensus 882 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------------------------------------- 924 (1099)
+|.++. ... .+ ...++.++++.++.||+..
T Consensus 98 ~G~~l~--~~~--------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (264)
T 1nd4_A 98 PGQDLL--SSH--------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQG 164 (264)
T ss_dssp SSEETT--TSC--------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTT
T ss_pred CCcccC--cCc--------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccC
Confidence 998773 211 11 2246677777788887643
Q ss_pred ---------------------ceecCCCCCCEEECCCCcEEEecccccc
Q 047739 925 ---------------------MVHGDIKPQNVLFDADFEAHLSDFGLDR 952 (1099)
Q Consensus 925 ---------------------iiH~Dlk~~NIll~~~~~~kl~DfGla~ 952 (1099)
++|+|++|.||+++++..+.|.|||.+.
T Consensus 165 ~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 165 LAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp CCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred ccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 9999999999999887667799999875
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.87 E-value=5.7e-10 Score=125.73 Aligned_cols=163 Identities=12% Similarity=0.101 Sum_probs=79.9
Q ss_pred CCccccccccccccccccccccccccccccCccccccCceeEEEccCCcCCccChhhhc--CCCCccEEEccc--ccCCC
Q 047739 179 SISNLSQLQLINFSFNKFSREVPATFEGTLPSAIANCSSLVHLSAQGNALGGVIPPAIG--ALPKLQVVSLAQ--NNLSG 254 (1099)
Q Consensus 179 ~~~~l~~L~~L~ls~N~l~~~~~~~~~g~lp~~l~~l~~L~~L~l~~N~l~~~~p~~~~--~l~~L~~L~Ls~--N~l~~ 254 (1099)
.+..+++|+.|+|++|.-. .+|. + .+++|++|++..+.++......+. .+|+|++|+|+. |...+
T Consensus 167 ll~~~P~L~~L~L~g~~~l---------~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~ 235 (362)
T 2ra8_A 167 VLDAMPLLNNLKIKGTNNL---------SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGF 235 (362)
T ss_dssp HHHTCTTCCEEEEECCBTC---------BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTC
T ss_pred HHhcCCCCcEEEEeCCCCc---------eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEecccccccc
Confidence 3444566666666655200 1222 2 256677777776666543333443 678888888753 22211
Q ss_pred ccCcccccccCCCCCcceEEEeccccccccCCCCCCCCCCceeEEEcCCCccccCcchhcc---CCCCccEEeCCCCccc
Q 047739 255 VVPASMFCNVSGYPPSIRVVQLGFNAFTNVAGPETGSCSSVLQVLDLQQNQIRGAFPLWLT---RASTLTRLDVSGNSIS 331 (1099)
Q Consensus 255 ~~p~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~---~l~~L~~L~Ls~N~i~ 331 (1099)
... +..+........+++|++|+|++|.+.+..+..+. .+++|++|||+.|.|+
T Consensus 236 ~~~-----------------------~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~ 292 (362)
T 2ra8_A 236 DGD-----------------------MNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLT 292 (362)
T ss_dssp CSC-----------------------GGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCB
T ss_pred chh-----------------------HHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCC
Confidence 100 00000001112245667777776666543222222 3556777777777766
Q ss_pred cCchh----hhCCCCCCCEEEccCCccCccCCccccC-CCCCCEEEccCCc
Q 047739 332 GKIPA----QIGGLWRLEELKMANNSFGGAVPVEIKQ-CSSLSLLDLEGNR 377 (1099)
Q Consensus 332 ~~~p~----~~~~l~~L~~L~L~~n~l~~~~~~~l~~-l~~L~~L~Ls~N~ 377 (1099)
+..+. .+..+++|+.|+|++|.++......+.. + ...++++.++
T Consensus 293 d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 293 DEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred hHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 43222 2234566666666666665433333332 1 2445666555
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.84 E-value=7.3e-10 Score=124.87 Aligned_cols=181 Identities=13% Similarity=0.156 Sum_probs=120.1
Q ss_pred CcEeEEecCCCcccc-c-------cccccccccccceEEccCCccC---------cccCcccccCCcccEEEeccccCCC
Q 047739 66 NRVTELRLPRLQLSG-R-------ISDHLSNLRMLRKLSLRSNSFN---------GTIPATLAQCTLLRAVFLQYNSLSG 128 (1099)
Q Consensus 66 ~~v~~l~l~~~~l~g-~-------~~~~l~~l~~L~~L~L~~n~~~---------~~~p~~~~~l~~L~~L~l~~n~l~g 128 (1099)
.+|++|.+...+..| . +..++.++++|+.|.+..+.+. +.++..+..+++|+.|+|++|.- -
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~-l 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNN-L 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBT-C
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCC-c
Confidence 579999999877764 2 2455778999999999776432 23555667889999999988731 1
Q ss_pred ccCcccccCCCCceeecccccCCCcccCCc----ccccceeeCCC--CccCCC-----CCCCC--ccccccccccccccc
Q 047739 129 NLPANIGNLSNLEILNVAANRLSGEIANDL----PRNLKYFDLSS--NGFSGP-----IPTSI--SNLSQLQLINFSFNK 195 (1099)
Q Consensus 129 ~~p~~~~~l~~L~~L~ls~N~l~~~i~~~~----~~~L~~L~ls~--N~l~~~-----~p~~~--~~l~~L~~L~ls~N~ 195 (1099)
.+|. +. +++|++|+|+.+.++......+ .++|++|+|+. |...|. +...+ ..+++|++|+|++|.
T Consensus 186 ~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~ 263 (362)
T 2ra8_A 186 SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAE 263 (362)
T ss_dssp BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCT
T ss_pred eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCC
Confidence 3444 43 8899999999888875433222 26888888853 322211 11122 347889999998888
Q ss_pred cccccccccccccCccccccCceeEEEccCCcCCccC----hhhhcCCCCccEEEcccccCCC
Q 047739 196 FSREVPATFEGTLPSAIANCSSLVHLSAQGNALGGVI----PPAIGALPKLQVVSLAQNNLSG 254 (1099)
Q Consensus 196 l~~~~~~~~~g~lp~~l~~l~~L~~L~l~~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~ 254 (1099)
++...+..+. ....+++|++|+|+.|.++..- +..+..+++|+.|+|++|.++.
T Consensus 264 i~~~~~~~la-----~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 264 EQNVVVEMFL-----ESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp THHHHHHHHH-----HCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred CchHHHHHHH-----hCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 8643221111 0124678888899888887643 3334567888888888888763
No 413
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.81 E-value=1e-08 Score=116.62 Aligned_cols=139 Identities=15% Similarity=0.207 Sum_probs=102.8
Q ss_pred cccccccccceeEEEEEECCceEEEEEECC--CCC--ccHHHHHHHHHHhhhcc--CCcceEEeeEEecCC--CceEEEE
Q 047739 807 EENVLSRTRYGLVFKACYNDGMVLSIRRLP--DGS--LDENLFRKEAEFLGKVR--HRNLTVLRGYYAGAP--DLRLLVY 878 (1099)
Q Consensus 807 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~--~~~--~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~--~~~~lV~ 878 (1099)
..+.++.|.++.||+....+ ..+++|+.. ... .....+.+|+++++.++ +..+.++++++.+.. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 35678999999999998765 467777765 332 23457889999999997 455778888876442 2358999
Q ss_pred eecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHcc------------------------------------
Q 047739 879 DYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHT------------------------------------ 922 (1099)
Q Consensus 879 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~------------------------------------ 922 (1099)
||++|..+.+... ..++...+..++.++++.|+.||+
T Consensus 121 e~v~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (359)
T 3dxp_A 121 EFVSGRVLWDQSL-------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETES 193 (359)
T ss_dssp ECCCCBCCCCTTC-------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSC
T ss_pred EecCCeecCCCcc-------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcC
Confidence 9999876643211 226778888899999999999996
Q ss_pred ----------------------CCceecCCCCCCEEECCCCc--EEEeccccccc
Q 047739 923 ----------------------SNMVHGDIKPQNVLFDADFE--AHLSDFGLDRL 953 (1099)
Q Consensus 923 ----------------------~~iiH~Dlk~~NIll~~~~~--~kl~DfGla~~ 953 (1099)
..++|+|+++.||+++.++. +.|.||+.+..
T Consensus 194 ~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 194 IPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred ChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 35899999999999987653 68999998864
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.61 E-value=6.4e-09 Score=115.24 Aligned_cols=186 Identities=15% Similarity=0.136 Sum_probs=114.3
Q ss_pred ccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhcc-CCc--ceEEeeEEecCC--CceEEEEeecC
Q 047739 808 ENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVR-HRN--LTVLRGYYAGAP--DLRLLVYDYMP 882 (1099)
Q Consensus 808 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~-H~n--iv~l~~~~~~~~--~~~~lV~e~~~ 882 (1099)
.+.++.|....||+.. ..+++|.-.. ......+.+|+++++.+. +.. +.+++.+..... ...|+|||+++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~-~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKH-SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESS-HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCC-cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 3568899999999864 3467776542 233567899999999884 333 233444432222 12378999999
Q ss_pred CCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHcc----------------------------------------
Q 047739 883 NGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHT---------------------------------------- 922 (1099)
Q Consensus 883 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~---------------------------------------- 922 (1099)
|.++.+.... .++..++..++.++++.++.||+
T Consensus 100 G~~l~~~~~~-------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 100 GVPLTPLLLN-------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp CEECCHHHHH-------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred CeECCccccc-------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 9877653321 15566667777777777777774
Q ss_pred ------------------CCceecCCCCCCEEECC--CCcEEEeccccccccCCCCCCCcccc-----------ccccCc
Q 047739 923 ------------------SNMVHGDIKPQNVLFDA--DFEAHLSDFGLDRLTIPTPAEASTST-----------TAVGTL 971 (1099)
Q Consensus 923 ------------------~~iiH~Dlk~~NIll~~--~~~~kl~DfGla~~~~~~~~~~~~~~-----------~~~gt~ 971 (1099)
..++|+|+++.||++++ ...+.|.||+.+....+...-..... .....+
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHc
Confidence 14799999999999998 45688999998865321100000000 000111
Q ss_pred cccC-ccccccCCCCCcCchhhHHHHHHHHHhCCCCC
Q 047739 972 GYVS-PEAALTGETTKESDVYSFGIVLLELLTGKRPV 1007 (1099)
Q Consensus 972 ~y~a-PE~~~~~~~~~~~DV~S~G~il~elltg~~P~ 1007 (1099)
++.. |+.... .....+.|+++.++|++.+|..+|
T Consensus 253 ~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 253 KHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp TCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 1112 221111 112257899999999999998764
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.36 E-value=6.2e-08 Score=98.38 Aligned_cols=122 Identities=11% Similarity=0.124 Sum_probs=67.0
Q ss_pred cchhccCCCCccEEeCCCC-ccccC----chhhhCCCCCCCEEEccCCccCcc----CCccccCCCCCCEEEccCCcCCC
Q 047739 310 FPLWLTRASTLTRLDVSGN-SISGK----IPAQIGGLWRLEELKMANNSFGGA----VPVEIKQCSSLSLLDLEGNRFSG 380 (1099)
Q Consensus 310 ~~~~~~~l~~L~~L~Ls~N-~i~~~----~p~~~~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~Ls~N~l~~ 380 (1099)
+...+...++|++|+|++| .|... +...+...++|++|+|++|.++.. +...+...++|++|+|++|.|..
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3344556677777777777 66532 334445556666666666666542 22334444566666666666653
Q ss_pred CCCccccCCCCCCeeeccCccccccCCccCCCCCCCCEEEc--ccCcCccc----cchhhhCCCCCCEEEccCCcCc
Q 047739 381 EIPEFLGDIRGLKSLTLAANLFSGSIPASFRNLPGLENLNL--RHNSLSGS----LPEEVLGMNNLSTLDLSENKFS 451 (1099)
Q Consensus 381 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L--~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~ 451 (1099)
.... .+...+...++|++|+| ++|.|... +...+...++|++|+|++|.+.
T Consensus 108 ~g~~--------------------~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 108 SGIL--------------------ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHH--------------------HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHH--------------------HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 2111 12233344455666666 55666543 2233444566777777777664
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.35 E-value=9.8e-08 Score=96.93 Aligned_cols=123 Identities=16% Similarity=0.199 Sum_probs=85.3
Q ss_pred CchhhhCCCCCCCEEEccCC-ccCcc----CCccccCCCCCCEEEccCCcCCCCCCccccCCCCCCeeeccCccccccCC
Q 047739 333 KIPAQIGGLWRLEELKMANN-SFGGA----VPVEIKQCSSLSLLDLEGNRFSGEIPEFLGDIRGLKSLTLAANLFSGSIP 407 (1099)
Q Consensus 333 ~~p~~~~~l~~L~~L~L~~n-~l~~~----~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~ 407 (1099)
.+...+...+.|++|+|++| .++.. +...+...++|++|+|++|+|....... +.
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~--------------------l~ 86 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFA--------------------LA 86 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHH--------------------HH
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHH--------------------HH
Confidence 34456667778888888887 77643 3344555667777777777765322111 22
Q ss_pred ccCCCCCCCCEEEcccCcCccc----cchhhhCCCCCCEEEc--cCCcCccc----cCcccCCCCcccEEEccCCcCC
Q 047739 408 ASFRNLPGLENLNLRHNSLSGS----LPEEVLGMNNLSTLDL--SENKFSGE----VPASIGNLSQLMVFNLSGNAFS 475 (1099)
Q Consensus 408 ~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L--s~N~l~~~----~~~~l~~l~~L~~L~L~~N~l~ 475 (1099)
..+...++|++|+|++|.|... +...+...++|++|+| ++|.|+.. +...+...++|+.|+|++|.+.
T Consensus 87 ~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 87 EMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 2334457788899999988754 3556677889999999 88999754 3345566789999999999986
No 417
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.34 E-value=2.4e-08 Score=106.43 Aligned_cols=65 Identities=28% Similarity=0.403 Sum_probs=30.9
Q ss_pred CCCCceEEecCCcccC--cCCcchhccCcccEEeccCccccccCCcccCCCC--CCCEEECcCccccccCC
Q 047739 581 CSDLEVLELRSNSLTG--HIPTDISHLSHLNVLDLSINNLTGEIPDEISKCS--SLRSLLVNSNHLSGGIP 647 (1099)
Q Consensus 581 l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~--~L~~L~Ls~N~l~~~~p 647 (1099)
+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+|
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 4455555555555554 2334444555555555555555532 2222222 45555555555554333
No 418
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.30 E-value=1.8e-06 Score=96.14 Aligned_cols=134 Identities=17% Similarity=0.151 Sum_probs=93.8
Q ss_pred ccccccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhccC---C-cceEEeeEEecCCCceEEEEe
Q 047739 804 QFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRH---R-NLTVLRGYYAGAPDLRLLVYD 879 (1099)
Q Consensus 804 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H---~-niv~l~~~~~~~~~~~~lV~e 879 (1099)
.+...+.++.|....||+. |..+++|.... ......+.+|+++++.+.+ + .+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~-~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~-----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR-DSVRISQKRELELYRFLENCKLSYQIPAVVYQ-----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE-----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc-HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec-----CCcEEEEe
Confidence 5556778999999999998 55577776533 2224568999999999876 1 22334443 23489999
Q ss_pred ecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccC------------------------------------
Q 047739 880 YMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTS------------------------------------ 923 (1099)
Q Consensus 880 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~------------------------------------ 923 (1099)
|++|.++.+... ..++...+..++.++++.++.||+.
T Consensus 108 ~i~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (320)
T 3r70_A 108 YIKGERITYEQY-------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQL 180 (320)
T ss_dssp CCCCBCCCHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred ecCCcccccccc-------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccc
Confidence 999988763321 1145555666666666666666632
Q ss_pred ---------------------------CceecCCCCCCEEECCCCcEEEecccccccc
Q 047739 924 ---------------------------NMVHGDIKPQNVLFDADFEAHLSDFGLDRLT 954 (1099)
Q Consensus 924 ---------------------------~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~ 954 (1099)
.++|+|++|.||+++.+..+.|.||+.+...
T Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 181 LTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp CCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred ccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 2499999999999998766799999988643
No 419
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.19 E-value=5.4e-06 Score=91.48 Aligned_cols=134 Identities=18% Similarity=0.144 Sum_probs=85.7
Q ss_pred ccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhccCC---cceEEeeEEecCCCceEEEEeecCCC
Q 047739 808 ENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHR---NLTVLRGYYAGAPDLRLLVYDYMPNG 884 (1099)
Q Consensus 808 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~~~~~~~~lV~e~~~~g 884 (1099)
.+.++.|....||+. |..+++|.-. .......+.+|+++++.+.+. .+.+.+.+.....+..++||||++|.
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~-~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK-SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES-SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC-CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 345788888899988 4456667632 222346789999999999753 24455566543445568999999987
Q ss_pred CHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHc-------------------------------------------
Q 047739 885 NLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLH------------------------------------------- 921 (1099)
Q Consensus 885 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH------------------------------------------- 921 (1099)
.+.+..-. .++...+..++.++++.|+.||
T Consensus 99 ~l~~~~~~-------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (306)
T 3tdw_A 99 ILGEDGMA-------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY 171 (306)
T ss_dssp ECHHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred ECchhhhh-------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 77652110 0122223333333333333333
Q ss_pred -----------------cCCceecCCCCCCEEECC---CCc-EEEeccccccc
Q 047739 922 -----------------TSNMVHGDIKPQNVLFDA---DFE-AHLSDFGLDRL 953 (1099)
Q Consensus 922 -----------------~~~iiH~Dlk~~NIll~~---~~~-~kl~DfGla~~ 953 (1099)
...++|+|+++.||+++. ++. +.|.||+.+..
T Consensus 172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 225699999999999987 455 58999998764
No 420
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.14 E-value=8.8e-06 Score=88.63 Aligned_cols=76 Identities=20% Similarity=0.253 Sum_probs=60.0
Q ss_pred ccccccccccceeEEEEEECCceEEEEEECCCCC-ccHHHHHHHHHHhhhccCC---cceEEeeEEecCCCceEEEEeec
Q 047739 806 DEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGS-LDENLFRKEAEFLGKVRHR---NLTVLRGYYAGAPDLRLLVYDYM 881 (1099)
Q Consensus 806 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~---niv~l~~~~~~~~~~~~lV~e~~ 881 (1099)
...+.++.|.++.||++...+|..+++|+..... .....|.+|++.++.+++. .+.+++++. ..++||||+
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~-----~~~lvme~l 92 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD-----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE-----TTEEEEECC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec-----CcEEEEEec
Confidence 3456799999999999999899999999975432 2346789999999999875 466777653 148999999
Q ss_pred CCCCH
Q 047739 882 PNGNL 886 (1099)
Q Consensus 882 ~~gsL 886 (1099)
+++.+
T Consensus 93 ~g~~~ 97 (288)
T 3d1u_A 93 DERPP 97 (288)
T ss_dssp CCCCC
T ss_pred ccCCC
Confidence 99874
No 421
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.92 E-value=2.3e-05 Score=88.51 Aligned_cols=144 Identities=15% Similarity=0.130 Sum_probs=89.0
Q ss_pred ccccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhccCCc--ceEEeeEEecCCCceEEEEeecCC
Q 047739 806 DEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRN--LTVLRGYYAGAPDLRLLVYDYMPN 883 (1099)
Q Consensus 806 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~~~~~lV~e~~~~ 883 (1099)
...+.++.|....+|+... +|..+++|..... ..+.+|+.+++.+.... +.++++++.......|+||||++|
T Consensus 44 ~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred ceEEECCCCCcceEEEEEE-CCcEEEEEeCCch----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 3456788999999999886 4777888876432 35889999999986533 345666665443556999999997
Q ss_pred CCHHH---------------HH---hhhccCC---------------------------CCCCCHHHH------HHHHHH
Q 047739 884 GNLGT---------------LL---QEASHQD---------------------------GHVLNWPMR------HLIALG 912 (1099)
Q Consensus 884 gsL~~---------------~l---~~~~~~~---------------------------~~~l~~~~~------~~i~~~ 912 (1099)
..+.+ .+ +...... .....|... ......
T Consensus 119 ~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 198 (362)
T 3ovc_A 119 VTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQA 198 (362)
T ss_dssp EETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHH
Confidence 65532 11 1110000 000011110 011111
Q ss_pred HHHHHHHHcc----CCceecCCCCCCEEECCCCcEEEecccccccc
Q 047739 913 VARGLAFLHT----SNMVHGDIKPQNVLFDADFEAHLSDFGLDRLT 954 (1099)
Q Consensus 913 ia~~L~~LH~----~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~ 954 (1099)
+....+++.. ..++|+|+++.||++++++.+.|.||+.+...
T Consensus 199 ~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 199 LDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 2222223322 35899999999999988777889999988653
No 422
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.90 E-value=5.1e-05 Score=82.02 Aligned_cols=131 Identities=18% Similarity=0.131 Sum_probs=88.2
Q ss_pred ccccccce-eEEEEEEC-CceEEEEEECCCCCccHHHHHHHHHHhhhcc-CCcceEEeeEEecCCCceEEEEeecCCCCH
Q 047739 810 VLSRTRYG-LVFKACYN-DGMVLSIRRLPDGSLDENLFRKEAEFLGKVR-HRNLTVLRGYYAGAPDLRLLVYDYMPNGNL 886 (1099)
Q Consensus 810 ~lg~G~~g-~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~lV~e~~~~gsL 886 (1099)
.+..|..| .||+.... ++..+++|+-... ....+.+|++.++.+. +--+-++++++.+. +..++|||++++.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~-~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTP-DDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEET-TEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEEC-CeEEEEEEeeCCccc
Confidence 34445544 69998765 4567888875432 3456889999999885 22355667777644 456999999998877
Q ss_pred HHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccC-------------------------------------------
Q 047739 887 GTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTS------------------------------------------- 923 (1099)
Q Consensus 887 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~------------------------------------------- 923 (1099)
.+..... ......++.++++.++.||+.
T Consensus 108 ~~~~~~~---------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (272)
T 4gkh_A 108 FQVLEEY---------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ 178 (272)
T ss_dssp HHHHHHC---------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred cccccCC---------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence 6654321 112233444555555555521
Q ss_pred ---------------CceecCCCCCCEEECCCCcEEEecccccc
Q 047739 924 ---------------NMVHGDIKPQNVLFDADFEAHLSDFGLDR 952 (1099)
Q Consensus 924 ---------------~iiH~Dlk~~NIll~~~~~~kl~DfGla~ 952 (1099)
.++|+|+++.||+++.++.+-|.||+.+.
T Consensus 179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 26899999999999988777899999775
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.87 E-value=2e-05 Score=89.13 Aligned_cols=80 Identities=13% Similarity=0.019 Sum_probs=55.2
Q ss_pred cccc-ccccceeEEEEEEC-------CceEEEEEECCCCC---c-cHHHHHHHHHHhhhcc-C--CcceEEeeEEecCC-
Q 047739 808 ENVL-SRTRYGLVFKACYN-------DGMVLSIRRLPDGS---L-DENLFRKEAEFLGKVR-H--RNLTVLRGYYAGAP- 871 (1099)
Q Consensus 808 ~~~l-g~G~~g~Vy~~~~~-------~g~~vavK~~~~~~---~-~~~~~~~E~~~l~~l~-H--~niv~l~~~~~~~~- 871 (1099)
.+.| +.|....+|+.... ++..+++|.-.... . ....+.+|+++++.+. + -.+.++++++.+..
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88889999998764 26678888765432 1 2356889999999885 2 24566777765432
Q ss_pred -CceEEEEeecCCCCHH
Q 047739 872 -DLRLLVYDYMPNGNLG 887 (1099)
Q Consensus 872 -~~~~lV~e~~~~gsL~ 887 (1099)
...++||||++|..+.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 2348999999986654
No 424
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.70 E-value=0.00018 Score=80.63 Aligned_cols=140 Identities=18% Similarity=0.234 Sum_probs=79.6
Q ss_pred cccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhcc-----CCcceEEe-e-EEecCCCceEEEEeec
Q 047739 809 NVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVR-----HRNLTVLR-G-YYAGAPDLRLLVYDYM 881 (1099)
Q Consensus 809 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~-----H~niv~l~-~-~~~~~~~~~~lV~e~~ 881 (1099)
+.++.|..+.||+....+|. +++|+... ....+..|+++++.+. .|.++... | ++....+..++||||+
T Consensus 38 ~~l~gG~~n~~~~v~~~~~~-~vlk~~~~---~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSGA-VCLKRIHR---PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp EECC----CEEEEEEETTEE-EEEEEECS---CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eeccccccCcEEEEEeCCCC-EEEEecCC---CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 44666788999999887665 77888764 2344556677776663 23333310 1 1111234458999999
Q ss_pred CCCCHH--------------HHHhhhccC---C-C-----CCCCHHHHH-------------------------------
Q 047739 882 PNGNLG--------------TLLQEASHQ---D-G-----HVLNWPMRH------------------------------- 907 (1099)
Q Consensus 882 ~~gsL~--------------~~l~~~~~~---~-~-----~~l~~~~~~------------------------------- 907 (1099)
+|..+. ..++..... . . ....|....
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986542 112221110 0 0 112232210
Q ss_pred HHHHHHHHHHHHHc-------------cCCceecCCCCCCEEECCCCcEEEecccccc
Q 047739 908 LIALGVARGLAFLH-------------TSNMVHGDIKPQNVLFDADFEAHLSDFGLDR 952 (1099)
Q Consensus 908 ~i~~~ia~~L~~LH-------------~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~ 952 (1099)
.+...+..++++++ ...++|+|+++.||+++.++.+.|.||+.+.
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 11122334566665 3579999999999999888899999999765
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.61 E-value=2e-05 Score=77.76 Aligned_cols=34 Identities=18% Similarity=0.169 Sum_probs=16.2
Q ss_pred CCCEEEeccCcCcccCCcccCCCCccceeeeccc
Q 047739 487 KLTTLDLSKQNFSGELPIELAGLPNLQVIALQEN 520 (1099)
Q Consensus 487 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N 520 (1099)
.|+.||++++.++..--..+..+++|+.|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 3455555554444433334444555555555554
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.59 E-value=2.4e-05 Score=77.11 Aligned_cols=83 Identities=12% Similarity=0.101 Sum_probs=42.2
Q ss_pred cccEEEccCCcCCCcCCCCCCCCCCCCEEEeccCc-CcccCCcccCCC----Cccceeeecccc-ccCCCchhhhccccc
Q 047739 463 QLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSKQN-FSGELPIELAGL----PNLQVIALQENK-LSGNVPEGFSSLMSL 536 (1099)
Q Consensus 463 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~-l~~~~~~~l~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~L 536 (1099)
+|+.||++++.+++.....+.++++|++|+|++|. +++.--..++.+ ++|+.|+|++|. +++..-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555554444445556666666666653 443333333332 245555555553 444333444555555
Q ss_pred ceecccccc
Q 047739 537 RYLNLSFNG 545 (1099)
Q Consensus 537 ~~L~Ls~N~ 545 (1099)
++|++++|.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 555555553
No 427
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.58 E-value=0.00023 Score=81.56 Aligned_cols=74 Identities=14% Similarity=0.063 Sum_probs=48.4
Q ss_pred ccccccccceeEEEEEEC-CceEEEEEECCCCC--------ccHHHHHHHHHHhhhccC--Ccce-EEeeEEecCCCceE
Q 047739 808 ENVLSRTRYGLVFKACYN-DGMVLSIRRLPDGS--------LDENLFRKEAEFLGKVRH--RNLT-VLRGYYAGAPDLRL 875 (1099)
Q Consensus 808 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--------~~~~~~~~E~~~l~~l~H--~niv-~l~~~~~~~~~~~~ 875 (1099)
.+.+|.|..+.||++... ++..+++|...... ...+++..|+++++.+.. +..+ +++.+ . .+ ..+
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~-d-~~-~~~ 111 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS-D-TE-MAV 111 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE-E-TT-TTE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE-c-CC-ccE
Confidence 457899999999999754 46788888754221 123567889999998843 4444 45443 2 22 348
Q ss_pred EEEeecCCC
Q 047739 876 LVYDYMPNG 884 (1099)
Q Consensus 876 lV~e~~~~g 884 (1099)
+||||+++.
T Consensus 112 lvmE~l~g~ 120 (397)
T 2olc_A 112 TVMEDLSHL 120 (397)
T ss_dssp EEECCCTTS
T ss_pred EEEEeCCCc
Confidence 999999763
No 428
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.29 E-value=8.9e-05 Score=74.55 Aligned_cols=64 Identities=13% Similarity=0.186 Sum_probs=29.5
Q ss_pred CCCCCCEEEccCCcCCCC----CCccccCCCCCCeeeccCc---cccc----cCCccCCCCCCCCEEEcccCcCc
Q 047739 364 QCSSLSLLDLEGNRFSGE----IPEFLGDIRGLKSLTLAAN---LFSG----SIPASFRNLPGLENLNLRHNSLS 427 (1099)
Q Consensus 364 ~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~n---~l~~----~~~~~~~~l~~L~~L~L~~N~l~ 427 (1099)
.-+.|++|+|++|.|... +-+.+..-+.|++|+|++| .+.. .+...+..-+.|+.|+++.|.+.
T Consensus 96 ~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 96 TSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred cCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 334455555555544421 1223333344555555433 2221 12334444566777777766543
No 429
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.22 E-value=0.00012 Score=73.65 Aligned_cols=112 Identities=12% Similarity=0.135 Sum_probs=59.6
Q ss_pred CCCCCCCEEEccCC-ccCcc----CCccccCCCCCCEEEccCCcCCCC----CCccccCCCCCCeeeccCccccc----c
Q 047739 339 GGLWRLEELKMANN-SFGGA----VPVEIKQCSSLSLLDLEGNRFSGE----IPEFLGDIRGLKSLTLAANLFSG----S 405 (1099)
Q Consensus 339 ~~l~~L~~L~L~~n-~l~~~----~~~~l~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~n~l~~----~ 405 (1099)
.+-+.|++|+|++| +|... +.+.+..-+.|+.|+|++|+|... +.+.+..-+.|++|+|+.|.|.. .
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 33444555555543 44321 333455556677777777777532 23344455667777777777753 2
Q ss_pred CCccCCCCCCCCEEEcccC---cCccc----cchhhhCCCCCCEEEccCCcC
Q 047739 406 IPASFRNLPGLENLNLRHN---SLSGS----LPEEVLGMNNLSTLDLSENKF 450 (1099)
Q Consensus 406 ~~~~~~~l~~L~~L~L~~N---~l~~~----~~~~~~~l~~L~~L~Ls~N~l 450 (1099)
+..++..-+.|++|+|++| .+... +.+.+..-+.|+.|+++.|.+
T Consensus 118 la~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 3334555556777777654 22321 223344455666666665543
No 430
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.09 E-value=0.0039 Score=69.06 Aligned_cols=158 Identities=11% Similarity=0.126 Sum_probs=91.0
Q ss_pred cCCHHHHHHHHhcccc-----ccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhccCCc--ceEEe
Q 047739 792 KITLAETVEATRQFDE-----ENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRN--LTVLR 864 (1099)
Q Consensus 792 ~~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~ 864 (1099)
..+..++....+.|.. ...++ |....||+....+|..+++|.........+.+..|+++++.+.... +.+++
T Consensus 10 ~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~ 88 (328)
T 1zyl_A 10 TLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPV 88 (328)
T ss_dssp CCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCC
T ss_pred CCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeeccee
Confidence 3455555555555543 23466 7788999988777777888988644445677888999988885322 33343
Q ss_pred eEEec-----CCCceEEEEeecCCCCHH-----------HH---HhhhccC----CCCCCCHHHH---------------
Q 047739 865 GYYAG-----APDLRLLVYDYMPNGNLG-----------TL---LQEASHQ----DGHVLNWPMR--------------- 906 (1099)
Q Consensus 865 ~~~~~-----~~~~~~lV~e~~~~gsL~-----------~~---l~~~~~~----~~~~l~~~~~--------------- 906 (1099)
.. .+ ..+..++||||++|..+. .. ++..... .....++...
T Consensus 89 ~~-~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (328)
T 1zyl_A 89 AF-NGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIP 167 (328)
T ss_dssp CB-TTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSC
T ss_pred ec-CCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCC
Confidence 32 11 123457899999874432 11 1211110 0111222111
Q ss_pred -------HHHHHHHHHHHHHH----ccCCceecCCCCCCEEECCCCcEEEeccccccc
Q 047739 907 -------HLIALGVARGLAFL----HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRL 953 (1099)
Q Consensus 907 -------~~i~~~ia~~L~~L----H~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~ 953 (1099)
...+.+++..++-. ....++|+|+++.||+++ + .+.|.||+.+..
T Consensus 168 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 168 SGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 11112222222222 234689999999999999 4 899999987753
No 431
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.08 E-value=0.0023 Score=69.49 Aligned_cols=78 Identities=19% Similarity=0.264 Sum_probs=56.8
Q ss_pred ccccccccccccceeEEEEEECCceEEEEEECCCCCc-cHHHHHHHHHHhhhccCC---cceEEeeEEecCCCceEEEEe
Q 047739 804 QFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSL-DENLFRKEAEFLGKVRHR---NLTVLRGYYAGAPDLRLLVYD 879 (1099)
Q Consensus 804 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~H~---niv~l~~~~~~~~~~~~lV~e 879 (1099)
.+...+.+|.|..+.||+.+..||+.|.+|+-..... ....|.+|++.|+.+.-. -+.+++++. . .++|||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~---~--~~lv~e 90 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---D--RTLAME 90 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---T--TEEEEE
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc---C--ceEEEE
Confidence 4555678999999999999999999999998764432 245689999999988422 233444432 1 279999
Q ss_pred ecCCCCH
Q 047739 880 YMPNGNL 886 (1099)
Q Consensus 880 ~~~~gsL 886 (1099)
|++++..
T Consensus 91 ~l~~~~~ 97 (288)
T 3f7w_A 91 WVDERPP 97 (288)
T ss_dssp CCCCCCC
T ss_pred eecccCC
Confidence 9987643
No 432
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.05 E-value=0.00059 Score=64.10 Aligned_cols=57 Identities=14% Similarity=0.308 Sum_probs=47.5
Q ss_pred ceeecccccCC-CcccCCcccccceeeCCCCccCCCCCCCCccccccccccccccccc
Q 047739 141 EILNVAANRLS-GEIANDLPRNLKYFDLSSNGFSGPIPTSISNLSQLQLINFSFNKFS 197 (1099)
Q Consensus 141 ~~L~ls~N~l~-~~i~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 197 (1099)
..++-++++|+ ..+|..++.+|++|+|++|+|+...+..|..+++|++|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 36778888886 5788888999999999999999666677888888888888888775
No 433
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.03 E-value=0.003 Score=69.80 Aligned_cols=159 Identities=15% Similarity=0.128 Sum_probs=88.1
Q ss_pred cCCHHHHHHHHhcccc-----ccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhccCCcc--eEEe
Q 047739 792 KITLAETVEATRQFDE-----ENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNL--TVLR 864 (1099)
Q Consensus 792 ~~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni--v~l~ 864 (1099)
.++.+++.....+|.. .+.|+.|....+|+....+| .+++|..... ...+.+..|+++++.+....+ .+++
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 4566677777677765 23466788889999988766 4667776542 233456778888887753222 2222
Q ss_pred eEEe-----cCCCceEEEEeecCCCCHHH--------------HHhhhccC-CC------CCCCHHHHHH----------
Q 047739 865 GYYA-----GAPDLRLLVYDYMPNGNLGT--------------LLQEASHQ-DG------HVLNWPMRHL---------- 908 (1099)
Q Consensus 865 ~~~~-----~~~~~~~lV~e~~~~gsL~~--------------~l~~~~~~-~~------~~l~~~~~~~---------- 908 (1099)
.... ...+..++||+|++|..+.. .++..... .. ....|.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 2110 01234589999998754321 12221100 00 0012222110
Q ss_pred --HHHHHHHHHHHHcc-------CCceecCCCCCCEEECCCCcEEEecccccc
Q 047739 909 --IALGVARGLAFLHT-------SNMVHGDIKPQNVLFDADFEAHLSDFGLDR 952 (1099)
Q Consensus 909 --i~~~ia~~L~~LH~-------~~iiH~Dlk~~NIll~~~~~~kl~DfGla~ 952 (1099)
+...+.+.++++++ .+++|+|+++.||+++++..+.|.||+.+.
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 01123344555542 369999999999999987666899998765
No 434
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.90 E-value=0.0032 Score=72.47 Aligned_cols=78 Identities=13% Similarity=0.109 Sum_probs=47.0
Q ss_pred ccCCceecCCCCCCEEECCCCcEEEeccccccccCCCCCCCccccccc--cCccccCccccccCC---CCCcCchhhHHH
Q 047739 921 HTSNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTPAEASTSTTAV--GTLGYVSPEAALTGE---TTKESDVYSFGI 995 (1099)
Q Consensus 921 H~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~---~~~~~DV~S~G~ 995 (1099)
+...++|+|+++.||+++.++ ++|.||+.+....+. .+ ..... -...|++|+...... .....++.+...
T Consensus 230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~--~D--la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (420)
T 2pyw_A 230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMG--FD--IGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIE 304 (420)
T ss_dssp BCCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHH--HH--HHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHH
T ss_pred CCCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchH--HH--HHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHH
Confidence 567899999999999998876 999999988753110 00 00001 113466666543111 111234557777
Q ss_pred HHHHHHhC
Q 047739 996 VLLELLTG 1003 (1099)
Q Consensus 996 il~elltg 1003 (1099)
.+|+...+
T Consensus 305 ~~~~~y~~ 312 (420)
T 2pyw_A 305 QTWNLFNK 312 (420)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77777654
No 435
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.90 E-value=0.0019 Score=70.71 Aligned_cols=71 Identities=15% Similarity=0.052 Sum_probs=42.4
Q ss_pred ccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhccCCcce-EEeeEEecCCCceEEEEeec-CCCC
Q 047739 808 ENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLT-VLRGYYAGAPDLRLLVYDYM-PNGN 885 (1099)
Q Consensus 808 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~~~~~~~~~~~~lV~e~~-~~gs 885 (1099)
.+.|+.|....+|+. ..+++|.............+|+++++.+....+. +++++.. +.-++|+||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~~~---~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHVDP---ATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEECT---TTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEEEC---CCCEEEEeecCCCcc
Confidence 567888999999998 3466776643321112245788888877533333 4444432 2237899999 5544
Q ss_pred H
Q 047739 886 L 886 (1099)
Q Consensus 886 L 886 (1099)
+
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 3
No 436
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.68 E-value=0.0044 Score=69.72 Aligned_cols=140 Identities=16% Similarity=0.162 Sum_probs=79.9
Q ss_pred cccccccceeEEEEEEC--------CceEEEEEECCCCCccHHHHHHHHHHhhhccCCcc-eEEeeEEecCCCceEEEEe
Q 047739 809 NVLSRTRYGLVFKACYN--------DGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNL-TVLRGYYAGAPDLRLLVYD 879 (1099)
Q Consensus 809 ~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~~lV~e 879 (1099)
+.+..|-...+|+.... ++..+++|+............+|.++++.+.-..+ .++++++.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~-----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE-----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT-----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC-----ccEEE
Confidence 45777888899999874 24678888863322345667799999998853223 445555542 38999
Q ss_pred ecCCCCHHH--------------HH---hhhccCCCCCCC--HHHHHHHHHHHH-------------------HHHHHHc
Q 047739 880 YMPNGNLGT--------------LL---QEASHQDGHVLN--WPMRHLIALGVA-------------------RGLAFLH 921 (1099)
Q Consensus 880 ~~~~gsL~~--------------~l---~~~~~~~~~~l~--~~~~~~i~~~ia-------------------~~L~~LH 921 (1099)
|++|..+.. .+ +.....-+.... |....++..++. ..+.++.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 999754431 11 111111111122 333333333321 1222322
Q ss_pred ----c----CCceecCCCCCCEEECCC----CcEEEeccccccc
Q 047739 922 ----T----SNMVHGDIKPQNVLFDAD----FEAHLSDFGLDRL 953 (1099)
Q Consensus 922 ----~----~~iiH~Dlk~~NIll~~~----~~~kl~DfGla~~ 953 (1099)
. ..++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2 258999999999999876 7899999998753
No 437
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.66 E-value=0.0061 Score=67.70 Aligned_cols=141 Identities=12% Similarity=0.054 Sum_probs=72.9
Q ss_pred ccccccccee-EEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhccCCc--ceEEeeEEecCCCceEEEEeecCCCC
Q 047739 809 NVLSRTRYGL-VFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRN--LTVLRGYYAGAPDLRLLVYDYMPNGN 885 (1099)
Q Consensus 809 ~~lg~G~~g~-Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~~~~~lV~e~~~~gs 885 (1099)
+.++.|.... +|+....+|..+++|...... .+.+..|+++++.+.... +.+++.+.. ... ++|||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~--~~~~~~e~~~l~~L~~~g~~vP~v~~~d~--~~g-~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE--GGDTQPFVDLAQYLRNLDISAPEIYAEEH--ARG-LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT--TCCSHHHHHHHHHHHHTTCBCCCEEEEET--TTT-EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC--CccccHHHHHHHHHHhCCCCCCceeeecC--CCC-EEEEeeCCCcc
Confidence 3455454443 667765445666677654322 134567788877774222 344555533 223 78999997766
Q ss_pred HHHHHhhhc-----------------cC---C-CCCCCHHHHH--------------------HHHHHHHHHHHHH----
Q 047739 886 LGTLLQEAS-----------------HQ---D-GHVLNWPMRH--------------------LIALGVARGLAFL---- 920 (1099)
Q Consensus 886 L~~~l~~~~-----------------~~---~-~~~l~~~~~~--------------------~i~~~ia~~L~~L---- 920 (1099)
+.+++.... +. . -...+..... .....+...++.+
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 655443210 00 0 0111111000 0001112222222
Q ss_pred --ccCCceecCCCCCCEEECCC----CcEEEecccccccc
Q 047739 921 --HTSNMVHGDIKPQNVLFDAD----FEAHLSDFGLDRLT 954 (1099)
Q Consensus 921 --H~~~iiH~Dlk~~NIll~~~----~~~kl~DfGla~~~ 954 (1099)
+...++|+|+++.||+++.+ +.+.|.||+.+...
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 23479999999999999874 67999999988643
No 438
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=96.65 E-value=0.011 Score=64.59 Aligned_cols=137 Identities=13% Similarity=0.154 Sum_probs=87.2
Q ss_pred ccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhcc---CCcceEEeeEEecCCCceEEEEeecCCC
Q 047739 808 ENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVR---HRNLTVLRGYYAGAPDLRLLVYDYMPNG 884 (1099)
Q Consensus 808 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~~lV~e~~~~g 884 (1099)
.+.|+.|....+|+.... +..+++|.-... ....+.+|++.++.+. ...+.+++++.... +..++||||+++.
T Consensus 41 ~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~-g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDE-VQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQ-GHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEESS-SCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECS-SEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEEC-CCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecC-CceEEEEEeccCC
Confidence 456899999999999864 556777876432 3567899999999884 25577777777643 4569999999987
Q ss_pred CHH--------H---HHhhhccCC-----------------CCCCCHHHHH---HHHH----------------HHHHH-
Q 047739 885 NLG--------T---LLQEASHQD-----------------GHVLNWPMRH---LIAL----------------GVARG- 916 (1099)
Q Consensus 885 sL~--------~---~l~~~~~~~-----------------~~~l~~~~~~---~i~~----------------~ia~~- 916 (1099)
.+. + .++...... ...-+|.... ++.. .+.+.
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 542 1 223221100 0012454321 1111 11111
Q ss_pred HHHHc----cCCceecCCCCCCEEECCCCcEEEeccc
Q 047739 917 LAFLH----TSNMVHGDIKPQNVLFDADFEAHLSDFG 949 (1099)
Q Consensus 917 L~~LH----~~~iiH~Dlk~~NIll~~~~~~kl~DfG 949 (1099)
...|. ...++|+|+.+.|++++.++ +.|.||+
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 22342 23699999999999999887 8899974
No 439
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.32 E-value=0.0054 Score=57.47 Aligned_cols=57 Identities=25% Similarity=0.353 Sum_probs=39.1
Q ss_pred cEEeccCcccc-ccCCcccCCCCCCCEEECcCccccccCChhhhccCCCCeeecCCCcCC
Q 047739 609 NVLDLSINNLT-GEIPDEISKCSSLRSLLVNSNHLSGGIPDSLAKLSNLAVLDLSANNLS 667 (1099)
Q Consensus 609 ~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~ 667 (1099)
..++.+++.|+ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|++.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 36777777775 24665433 46778888888887555566777778888888877775
No 440
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.26 E-value=0.0078 Score=67.93 Aligned_cols=73 Identities=7% Similarity=-0.013 Sum_probs=44.3
Q ss_pred ccccccccceeEEEEEECCc---------eEEEEEECCCCCccHHHHHHHHHHhhhccCCcc-eEEeeEEecCCCceEEE
Q 047739 808 ENVLSRTRYGLVFKACYNDG---------MVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNL-TVLRGYYAGAPDLRLLV 877 (1099)
Q Consensus 808 ~~~lg~G~~g~Vy~~~~~~g---------~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~~lV 877 (1099)
.+.++.|....+|+....++ ..+++|..............|.++++.+...++ .++++.. . -++|
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~---~~~v 112 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N---GGRI 112 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T---TEEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C---CcEE
Confidence 45677888889999987642 678888865432211234678888888853343 3555443 1 2789
Q ss_pred EeecCCCC
Q 047739 878 YDYMPNGN 885 (1099)
Q Consensus 878 ~e~~~~gs 885 (1099)
|||++|..
T Consensus 113 ~e~i~G~~ 120 (369)
T 3c5i_A 113 EEWLYGDP 120 (369)
T ss_dssp EECCCSEE
T ss_pred EEEecCCc
Confidence 99998754
No 441
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.07 E-value=0.013 Score=67.30 Aligned_cols=72 Identities=14% Similarity=0.189 Sum_probs=48.7
Q ss_pred ccccccccceeEEEEEECC--------ceEEEEEECCCCCccHHHHHHHHHHhhhccCCcc-eEEeeEEecCCCceEEEE
Q 047739 808 ENVLSRTRYGLVFKACYND--------GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNL-TVLRGYYAGAPDLRLLVY 878 (1099)
Q Consensus 808 ~~~lg~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~~lV~ 878 (1099)
.+.|+.|-...||+....+ +..+++|+.... ...+.+.+|..+++.+...++ .++++.+. + .+||
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~---~--g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFS---G--GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEET---T--EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC---C--CEEE
Confidence 3567888889999998753 467888887432 122456689999998854344 45566543 1 4899
Q ss_pred eecCCCC
Q 047739 879 DYMPNGN 885 (1099)
Q Consensus 879 e~~~~gs 885 (1099)
||++|.+
T Consensus 152 e~l~G~~ 158 (429)
T 1nw1_A 152 EYIPSRP 158 (429)
T ss_dssp CCCCEEE
T ss_pred EEeCCcc
Confidence 9998633
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.66 E-value=0.043 Score=63.39 Aligned_cols=73 Identities=10% Similarity=0.077 Sum_probs=46.9
Q ss_pred cccccccceeEEEEEECC-ceEEEEEECCCCCccHHHHHHHHHHhhhccCCcc-eEEeeEEecCCCceEEEEeecCCCCH
Q 047739 809 NVLSRTRYGLVFKACYND-GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNL-TVLRGYYAGAPDLRLLVYDYMPNGNL 886 (1099)
Q Consensus 809 ~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~~lV~e~~~~gsL 886 (1099)
+.|+.|-...+|+....+ +..+++|+........-...+|..+++.+...++ .++++++. . ..||||++|.++
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~---~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFT---N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEET---T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeC---C--eEEEEeeCCccC
Confidence 567888899999998875 4778888764322111112689999999875555 34666552 2 359999987443
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=94.31 E-value=0.11 Score=57.57 Aligned_cols=31 Identities=26% Similarity=0.313 Sum_probs=27.4
Q ss_pred CCceecCCCCCCEEECCCCcEEEeccccccc
Q 047739 923 SNMVHGDIKPQNVLFDADFEAHLSDFGLDRL 953 (1099)
Q Consensus 923 ~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~ 953 (1099)
..++|+|+.+.||+++.++.+.+.||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 3699999999999999888899999987754
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.92 E-value=0.23 Score=55.85 Aligned_cols=29 Identities=24% Similarity=0.322 Sum_probs=26.0
Q ss_pred CceecCCCCCCEEECCC------CcEEEecccccc
Q 047739 924 NMVHGDIKPQNVLFDAD------FEAHLSDFGLDR 952 (1099)
Q Consensus 924 ~iiH~Dlk~~NIll~~~------~~~kl~DfGla~ 952 (1099)
.++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 245 v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred eEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 58999999999999876 789999998775
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=92.88 E-value=0.27 Score=55.89 Aligned_cols=73 Identities=7% Similarity=-0.007 Sum_probs=47.4
Q ss_pred cccccccceeEEEEEECC--------ceEEEEEECCCCCccHHHHHHHHHHhhhccCCcc-eEEeeEEecCCCceEEEEe
Q 047739 809 NVLSRTRYGLVFKACYND--------GMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNL-TVLRGYYAGAPDLRLLVYD 879 (1099)
Q Consensus 809 ~~lg~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~~lV~e 879 (1099)
+.+..|-...+|+....+ +..+++|+........-...+|.++++.+.-.++ .++++.+. -+.|||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~~-----~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADFP-----EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEET-----TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEcC-----CCEEEE
Confidence 457778888999998763 5778888864432221234678999988853333 34444332 178999
Q ss_pred ecCCCCH
Q 047739 880 YMPNGNL 886 (1099)
Q Consensus 880 ~~~~gsL 886 (1099)
|++|..+
T Consensus 151 fI~G~~l 157 (424)
T 3mes_A 151 FIDGEPL 157 (424)
T ss_dssp CCCSEEC
T ss_pred EeCCccC
Confidence 9998653
No 446
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=92.60 E-value=0.62 Score=46.92 Aligned_cols=101 Identities=14% Similarity=0.087 Sum_probs=66.5
Q ss_pred CHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHcc-CCceecCCCCCCEEECCCCcEEEeccccccccCCCCCCCcc
Q 047739 885 NLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHT-SNMVHGDIKPQNVLFDADFEAHLSDFGLDRLTIPTPAEAST 963 (1099)
Q Consensus 885 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~iiH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 963 (1099)
+|.+.|+.. +.++++.+.|.++.|.+.+|.-.-. ..-..+=+.|..|++..+|.|...+ +.+.
T Consensus 34 SL~eIL~~~----~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~----------- 97 (229)
T 2yle_A 34 SLEEILRLY----NQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD----------- 97 (229)
T ss_dssp EHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred cHHHHHHHc----CCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc-----------
Confidence 789999864 3569999999999999999877621 1111333456889999999988763 1110
Q ss_pred ccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCC
Q 047739 964 STTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRP 1006 (1099)
Q Consensus 964 ~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P 1006 (1099)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 ----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1122456787653 3456778899999999999886555
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=85.96 E-value=1.3 Score=50.06 Aligned_cols=30 Identities=23% Similarity=0.366 Sum_probs=25.2
Q ss_pred CceecCCCCCCEEE------CCCCcEEEeccccccc
Q 047739 924 NMVHGDIKPQNVLF------DADFEAHLSDFGLDRL 953 (1099)
Q Consensus 924 ~iiH~Dlk~~NIll------~~~~~~kl~DfGla~~ 953 (1099)
.++|+|+.+.||++ +++..++++||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 36799999999999 4567799999998764
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=73.47 E-value=6.8 Score=39.32 Aligned_cols=116 Identities=11% Similarity=0.049 Sum_probs=73.4
Q ss_pred cCCcceEEeeEEecCCCceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccCCceecCCCCCCE
Q 047739 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTSNMVHGDIKPQNV 935 (1099)
Q Consensus 856 ~H~niv~l~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iiH~Dlk~~NI 935 (1099)
.||+.++. .+-. .++. +++.|-...+..+|-.- ...+...+++++.+|+....++++ -+|--++|+||
T Consensus 43 ~~~~Fl~~-~I~e-~eD~--v~~~y~~~~~~~~f~~i------k~~~~~eKlr~l~ni~~l~~~~~~--r~tf~L~P~NL 110 (215)
T 4ann_A 43 HSPYFIDA-ELTE-LRDS--FQIHYDINDNHTPFDNI------KSFTKNEKLRYLLNIKNLEEVNRT--RYTFVLAPDEL 110 (215)
T ss_dssp CCTTBCCE-EEEE-CSSE--EEEEECCCTTSEEGGGG------GGSCHHHHHHHHHHGGGGGGGGGS--SEECCCSGGGE
T ss_pred cCCcccce-EEEE-cccE--EEEEEEcCcccCCHHHH------HhcCHHHHHHHHHHHHHHHHHhcC--ceEEEEecceE
Confidence 68888866 3333 3344 33444433333333221 227888999999999987755443 36777999999
Q ss_pred EECCCCcEEEeccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCCC
Q 047739 936 LFDADFEAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPVM 1008 (1099)
Q Consensus 936 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~~ 1008 (1099)
++|.++.+++.-.|+...+ +|. ..++..=.-.+=+++..+++++..|.
T Consensus 111 ~f~~~~~p~i~~RGik~~l--------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVV--------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EECTTSCEEESCCEETTTB--------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEcCCCCEEEEEccCccCC--------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999877754322 121 11222224457788888999988763
No 449
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=72.51 E-value=0.47 Score=54.73 Aligned_cols=59 Identities=7% Similarity=0.031 Sum_probs=17.3
Q ss_pred cccccccccceeEEEEEECC-ceEEEE------EECCCCCccH---HHHHHHHHHhhhccCCcceEEeeEEe
Q 047739 807 EENVLSRTRYGLVFKACYND-GMVLSI------RRLPDGSLDE---NLFRKEAEFLGKVRHRNLTVLRGYYA 868 (1099)
Q Consensus 807 ~~~~lg~G~~g~Vy~~~~~~-g~~vav------K~~~~~~~~~---~~~~~E~~~l~~l~H~niv~l~~~~~ 868 (1099)
..+.+| ||.||+|.+.. ...||+ |....+.... ..|.+|..+++..+|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 345666 99999999875 357788 7665433332 45788999999999999999988765
No 450
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=65.93 E-value=18 Score=36.48 Aligned_cols=114 Identities=13% Similarity=0.095 Sum_probs=69.7
Q ss_pred cCCcceEEeeEEecCCCceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHH-HHccCCceecCCCCCC
Q 047739 856 RHRNLTVLRGYYAGAPDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLA-FLHTSNMVHGDIKPQN 934 (1099)
Q Consensus 856 ~H~niv~l~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~-~LH~~~iiH~Dlk~~N 934 (1099)
.||++ .. .+-. .++...+.|+.-+++.=...++ ..+...+++++.+|+.... ++ ..-+|--++|+|
T Consensus 48 ~~~~f-~~-~I~~-~eD~~~i~y~~~~~~~~f~~i~--------~~~~~eKlrll~nl~~L~~~~~--~~r~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI-VR-DIDV-SEDEVKVVIKPPSSFLTFAAIR--------KTTLLSRIRAAIHLVSKVKHHS--ARRLIFIVCPEN 114 (219)
T ss_dssp SCSSS-EE-EEEE-CSSEEEEEEECCTTCEEHHHHH--------TSCHHHHHHHHHHHHHHHSSCC--SSSEECCCCGGG
T ss_pred cCCCC-Ce-EEEE-eCCEEEEEEEcCcccCcHHHHH--------hcCHHHHHHHHHHHHHHHHHhh--hCceeEEEeCce
Confidence 68888 32 2222 3444345455443332222333 2788899999999987655 44 445677789999
Q ss_pred EEECCCCcEEEeccccccccCCCCCCCccccccccCccccCccccccCCCCCcCchhhHHHHHHHHHhCCCCC
Q 047739 935 VLFDADFEAHLSDFGLDRLTIPTPAEASTSTTAVGTLGYVSPEAALTGETTKESDVYSFGIVLLELLTGKRPV 1007 (1099)
Q Consensus 935 Ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G~il~elltg~~P~ 1007 (1099)
|++|.++.+++.-.|+-.. ++|.. .++..=.-.+=+++..++.++..|
T Consensus 115 L~f~~~~~p~i~hRGi~~~--------------------lpP~e-----~~ee~fl~qyKali~all~~K~~F 162 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVKES--------------------LPPDE-----WDDERLLREVKATVLALTEGEYRF 162 (219)
T ss_dssp EEECTTCCEEESCCEETTT--------------------BSSCS-----CCHHHHHHHHHHHHHHHTTCSSCH
T ss_pred EEEeCCCcEEEEEcCCccc--------------------CCCCC-----CCHHHHHHHHHHHHHHHHcCCCCH
Confidence 9999999999997775432 22221 111112335667777788887765
No 451
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=45.00 E-value=1.8e+02 Score=34.07 Aligned_cols=46 Identities=17% Similarity=0.151 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHH--HHHHHccCCceecCCCCCCEEECCCCcEEEecccccc
Q 047739 903 WPMRHLIALGVAR--GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR 952 (1099)
Q Consensus 903 ~~~~~~i~~~ia~--~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~ 952 (1099)
+..+..++..+|- .+.|+=.. +|=+++|||+|.+|++.=+|||...
T Consensus 454 ~~a~~nF~~S~A~ySvv~YILGi----gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYILGV----GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC----CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheeeec----cCCCCcceeEcCCCCEeeeehHHhh
Confidence 4556666655543 23343332 5778999999999999999999874
No 452
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=33.59 E-value=2.9e+02 Score=32.93 Aligned_cols=45 Identities=20% Similarity=0.200 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHH--HHHHHccCCceecCCCCCCEEECCCCcEEEecccccc
Q 047739 904 PMRHLIALGVAR--GLAFLHTSNMVHGDIKPQNVLFDADFEAHLSDFGLDR 952 (1099)
Q Consensus 904 ~~~~~i~~~ia~--~L~~LH~~~iiH~Dlk~~NIll~~~~~~kl~DfGla~ 952 (1099)
..+..++..+|- .+.|+=. =+|=+++|||++.+|++.=+|||.+.
T Consensus 529 ~ar~nF~~SlA~~Svv~YILG----lGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLG----VGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT----CCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHcc----CCCCCCcceEEeCCCCEEEEeehhhh
Confidence 345555555442 2333322 26889999999999999999999874
No 453
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=33.19 E-value=2.5e+02 Score=30.03 Aligned_cols=140 Identities=13% Similarity=0.132 Sum_probs=71.2
Q ss_pred cccccccccccceeEEEEEECCceEEEEEECCCCCccHHHHHHHHHHhhhccCCcceEEeeE-------------Eec--
Q 047739 805 FDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENLFRKEAEFLGKVRHRNLTVLRGY-------------YAG-- 869 (1099)
Q Consensus 805 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~-------------~~~-- 869 (1099)
+...+....|..|.++-.. ++..|+||.. .....+.+-.++...=.+.-|+..-+.-. +..
T Consensus 71 v~~I~~s~~Gstgvff~~t--d~~~~VVK~s--~~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~ 146 (342)
T 1cja_A 71 FKGIERSEKGTEGLFFVET--ESGVFIVKRS--TNIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSF 146 (342)
T ss_dssp EEEEEECCSTTSCEEEEEE--SSCEEEEECC--TTHHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSS
T ss_pred eeEEEeccCCCCCeEEEEe--CCCEEEEeCc--HHHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhh
Confidence 4445556667666555555 4778888854 23334445555554445556654322211 000
Q ss_pred ------CCCceEEEEeecCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHccC----Ccee-cCCCCCCEEEC
Q 047739 870 ------APDLRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTS----NMVH-GDIKPQNVLFD 938 (1099)
Q Consensus 870 ------~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~----~iiH-~Dlk~~NIll~ 938 (1099)
......++|||++|..|.+.-.. .....+.......++ -.-++.+...+ ..++ .-=.+.|||++
T Consensus 147 ~~l~~l~~~~~~l~meyv~G~~L~e~~~~---~~~~~f~~~~~k~LG--~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~ 221 (342)
T 1cja_A 147 RVITTLANQANILLMELVRGITLNKLTTT---SAPEVLTKSTMQQLG--SLMALDVIVNNSDRLPIAWTNEGNLDNIMLS 221 (342)
T ss_dssp CHHHHHTTCSEEEEEECCCEEESTTCCSS---SHHHHSCHHHHHHHH--HHHHHHHHHTCCSSSCSSSCSCCCGGGEEEE
T ss_pred HHHHHhhcccceehhhhcCCCccccchhh---hhhhhcCHHHHHhhc--hhheehhhhcCCccCcccccCCCChhheEEe
Confidence 11234699999987554432111 000112222222111 12345555544 2222 23578999997
Q ss_pred CCCc-EEEeccccccc
Q 047739 939 ADFE-AHLSDFGLDRL 953 (1099)
Q Consensus 939 ~~~~-~kl~DfGla~~ 953 (1099)
++.. +.++|-+.+..
T Consensus 222 ~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 222 ERGATVVPIDSKIIPL 237 (342)
T ss_dssp SBTTCEEECSCCCCCC
T ss_pred CCCCeEEEEcCCcccc
Confidence 6554 88999998864
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=31.39 E-value=1.1e+02 Score=26.20 Aligned_cols=42 Identities=10% Similarity=-0.013 Sum_probs=19.4
Q ss_pred ccCcccCCCCcccEEEccCCcCCCcCCCCCCCCCCCCEEEecc
Q 047739 453 EVPASIGNLSQLMVFNLSGNAFSGRIPASLGNLLKLTTLDLSK 495 (1099)
Q Consensus 453 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~ 495 (1099)
+...+|.++.+|+.+.|-.+ ++.+...+|.+|.+|+.+.+..
T Consensus 11 I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp SCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33344444455555444443 2223344555555555555543
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=28.62 E-value=82 Score=27.09 Aligned_cols=41 Identities=22% Similarity=0.251 Sum_probs=18.3
Q ss_pred chhhhCCCCCCCEEEccCCccCccCCccccCCCCCCEEEccC
Q 047739 334 IPAQIGGLWRLEELKMANNSFGGAVPVEIKQCSSLSLLDLEG 375 (1099)
Q Consensus 334 ~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~ 375 (1099)
...+|.++++|+.+.|-.+ ++.+-..+|.+|.+|+.+.+.+
T Consensus 12 ~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 12 DKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 3344444445554444432 2223344455555555555443
No 456
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=20.24 E-value=19 Score=27.00 Aligned_cols=10 Identities=50% Similarity=0.547 Sum_probs=3.9
Q ss_pred ehhhhhHHHH
Q 047739 727 AASGACLLAL 736 (1099)
Q Consensus 727 ~~~~~~~~~~ 736 (1099)
++++.+++++
T Consensus 16 vl~GLLLL~L 25 (54)
T 2l8s_A 16 AFAGLLLLML 25 (54)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333334333
Done!