Query 047742
Match_columns 91
No_of_seqs 177 out of 1045
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 04:03:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047742.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047742hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 99.6 5.4E-16 1.8E-20 115.9 6.5 58 1-58 286-344 (356)
2 1w9y_A 1-aminocyclopropane-1-c 99.6 4.4E-16 1.5E-20 115.0 4.5 58 1-58 232-292 (319)
3 3oox_A Putative 2OG-Fe(II) oxy 99.6 9.7E-16 3.3E-20 112.5 5.7 58 1-58 246-308 (312)
4 1odm_A Isopenicillin N synthas 99.5 2.1E-14 7.2E-19 106.2 6.7 56 1-58 268-323 (331)
5 1dcs_A Deacetoxycephalosporin 99.5 1.2E-14 4E-19 106.9 1.5 57 1-58 241-304 (311)
6 3on7_A Oxidoreductase, iron/as 98.9 1.5E-09 5E-14 78.7 3.9 44 1-58 229-276 (280)
7 2rg4_A Uncharacterized protein 72.4 2.5 8.6E-05 28.9 2.7 23 2-24 186-209 (216)
8 3dl3_A Tellurite resistance pr 32.7 33 0.0011 21.6 2.7 23 1-24 80-102 (119)
9 3bb6_A Uncharacterized protein 17.3 97 0.0033 19.7 2.6 24 1-24 81-104 (127)
10 1e5r_A Proline oxidase; oxidor 11.8 1.2E+02 0.004 21.8 2.0 19 2-20 157-175 (290)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=99.62 E-value=5.4e-16 Score=115.90 Aligned_cols=58 Identities=24% Similarity=0.299 Sum_probs=54.8
Q ss_pred CcceeeeCCCCCeEEEEeeecCCCCc-eEecCCCCcCCCCCCCCccccHHHHHHHHHhc
Q 047742 1 IEHRAVVNSVQERLSVATAYSLRYDG-EVYPAPSLISEKTPPLFRRVRIEEYFRSRYAL 58 (91)
Q Consensus 1 v~HRVv~~~~~~R~Sia~F~~P~~d~-~I~Plpelv~~~~p~~Y~~~t~~eyl~~~~~~ 58 (91)
++|||++++.++|||+|||+.|+.|+ +|+|+++|+++++|++|++++++||+..++..
T Consensus 286 ~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~~~~~p~~y~~~t~~eyl~~~~~~ 344 (356)
T 1gp6_A 286 ILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFG 344 (356)
T ss_dssp CCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHHHHHHH
T ss_pred cCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhcCCCCCccCCCccHHHHHHHHHHh
Confidence 47999999999999999999999999 99999999999999999999999999987765
No 2
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=99.60 E-value=4.4e-16 Score=115.00 Aligned_cols=58 Identities=24% Similarity=0.544 Sum_probs=50.2
Q ss_pred CcceeeeCCCCCeEEEEeeecCCCCceEecCCCCcCCC---CCCCCccccHHHHHHHHHhc
Q 047742 1 IEHRAVVNSVQERLSVATAYSLRYDGEVYPAPSLISEK---TPPLFRRVRIEEYFRSRYAL 58 (91)
Q Consensus 1 v~HRVv~~~~~~R~Sia~F~~P~~d~~I~Plpelv~~~---~p~~Y~~~t~~eyl~~~~~~ 58 (91)
++|||++++.++|||+|||+.|+.|++|+|+++|++++ +|++|++++++||+..++..
T Consensus 232 ~~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~ 292 (319)
T 1w9y_A 232 VMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGL 292 (319)
T ss_dssp CCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTT
T ss_pred ccceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhh
Confidence 57999999999999999999999999999999999988 69999999999999987765
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=99.59 E-value=9.7e-16 Score=112.48 Aligned_cols=58 Identities=17% Similarity=0.246 Sum_probs=52.6
Q ss_pred CcceeeeCC----CCCeEEEEeeecCCCCceEecCCCCcCCCCCCCCc-cccHHHHHHHHHhc
Q 047742 1 IEHRAVVNS----VQERLSVATAYSLRYDGEVYPAPSLISEKTPPLFR-RVRIEEYFRSRYAL 58 (91)
Q Consensus 1 v~HRVv~~~----~~~R~Sia~F~~P~~d~~I~Plpelv~~~~p~~Y~-~~t~~eyl~~~~~~ 58 (91)
++|||+++. ..+|||+|||+.|+.|++|+|+++|+++++|++|+ +++++||+..++..
T Consensus 246 ~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~ 308 (312)
T 3oox_A 246 TVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLRE 308 (312)
T ss_dssp CCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHH
T ss_pred CCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHH
Confidence 479998763 46799999999999999999999999999999999 99999999988753
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=99.51 E-value=2.1e-14 Score=106.17 Aligned_cols=56 Identities=18% Similarity=0.142 Sum_probs=51.2
Q ss_pred CcceeeeCCCCCeEEEEeeecCCCCceEecCCCCcCCCCCCCCccccHHHHHHHHHhc
Q 047742 1 IEHRAVVNSVQERLSVATAYSLRYDGEVYPAPSLISEKTPPLFRRVRIEEYFRSRYAL 58 (91)
Q Consensus 1 v~HRVv~~~~~~R~Sia~F~~P~~d~~I~Plpelv~~~~p~~Y~~~t~~eyl~~~~~~ 58 (91)
++|||++ +.++|||+|||+.|+.|++|+|+++|+++++ ++|++++++||+..+++.
T Consensus 268 ~~HRVv~-~~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~~t~~e~l~~~~~~ 323 (331)
T 1odm_A 268 PIHRVKW-VNAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDREPLSYGDYLQNGLVS 323 (331)
T ss_dssp CCEEEEC-CCSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSCCCBHHHHHHHHHHH
T ss_pred CCceeCC-CCCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCCCccHHHHHHHHHHH
Confidence 4799985 5789999999999999999999999999888 899999999999988764
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=99.45 E-value=1.2e-14 Score=106.88 Aligned_cols=57 Identities=11% Similarity=0.018 Sum_probs=51.3
Q ss_pred CcceeeeCC-----CCCeEEEEeeecCCCCceEecCCCCcCCCCCCCC--ccccHHHHHHHHHhc
Q 047742 1 IEHRAVVNS-----VQERLSVATAYSLRYDGEVYPAPSLISEKTPPLF--RRVRIEEYFRSRYAL 58 (91)
Q Consensus 1 v~HRVv~~~-----~~~R~Sia~F~~P~~d~~I~Plpelv~~~~p~~Y--~~~t~~eyl~~~~~~ 58 (91)
++|||++++ .++|||+|||+.|+.|++|+ +++|+++++|++| ++++++||+..++..
T Consensus 241 ~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~~~ 304 (311)
T 1dcs_A 241 PRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGGNYVN 304 (311)
T ss_dssp CCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSCCC
T ss_pred CCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHHHHHH
Confidence 479999987 78999999999999999999 9999999999999 999999999766544
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=98.86 E-value=1.5e-09 Score=78.69 Aligned_cols=44 Identities=16% Similarity=0.193 Sum_probs=37.8
Q ss_pred CcceeeeCC----CCCeEEEEeeecCCCCceEecCCCCcCCCCCCCCccccHHHHHHHHHhc
Q 047742 1 IEHRAVVNS----VQERLSVATAYSLRYDGEVYPAPSLISEKTPPLFRRVRIEEYFRSRYAL 58 (91)
Q Consensus 1 v~HRVv~~~----~~~R~Sia~F~~P~~d~~I~Plpelv~~~~p~~Y~~~t~~eyl~~~~~~ 58 (91)
++|||++++ ..+|||+|||+.|+.|++|+| ++|++||+..+++.
T Consensus 229 ~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~ 276 (280)
T 3on7_A 229 TSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLMERLRE 276 (280)
T ss_dssp CCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHH
T ss_pred CCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHH
Confidence 479998874 468999999999999999985 58999999988764
No 7
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=72.41 E-value=2.5 Score=28.90 Aligned_cols=23 Identities=26% Similarity=0.433 Sum_probs=17.3
Q ss_pred cceeeeCCC-CCeEEEEeeecCCC
Q 047742 2 EHRAVVNSV-QERLSVATAYSLRY 24 (91)
Q Consensus 2 ~HRVv~~~~-~~R~Sia~F~~P~~ 24 (91)
.|.|..+.. .+|+||+|.+.+..
T Consensus 186 ~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 186 RHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CEEECCCCSSSCEEEEEEEEEC--
T ss_pred EEeccCCCCCCCEEEEEEEeecCC
Confidence 589877654 68999999988754
No 8
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=32.74 E-value=33 Score=21.64 Aligned_cols=23 Identities=13% Similarity=-0.052 Sum_probs=17.7
Q ss_pred CcceeeeCCCCCeEEEEeeecCCC
Q 047742 1 IEHRAVVNSVQERLSVATAYSLRY 24 (91)
Q Consensus 1 v~HRVv~~~~~~R~Sia~F~~P~~ 24 (91)
+.|||. .++..|+-+-|+|.|..
T Consensus 80 ~wHrVe-~sdD~~f~leFyc~~~d 102 (119)
T 3dl3_A 80 YWHRIE-LSDDAQFNINFWSDQDK 102 (119)
T ss_dssp CEEEEE-ECTTCEEEEEEEECC--
T ss_pred ceEEEE-ECCCeEEEEEEEECchH
Confidence 369998 67778999999998865
No 9
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=17.33 E-value=97 Score=19.69 Aligned_cols=24 Identities=4% Similarity=-0.123 Sum_probs=19.5
Q ss_pred CcceeeeCCCCCeEEEEeeecCCC
Q 047742 1 IEHRAVVNSVQERLSVATAYSLRY 24 (91)
Q Consensus 1 v~HRVv~~~~~~R~Sia~F~~P~~ 24 (91)
..|||..-++.-|+-+-|||.|..
T Consensus 81 ~wH~Ve~lsdd~~f~leFyc~~~d 104 (127)
T 3bb6_A 81 KWHNIEAMTDDTYFNIDFFVAPEV 104 (127)
T ss_dssp CEEEEEESSTTCEEEEEEEECHHH
T ss_pred CcEEEEEcCCCEEEEEEEEeCCch
Confidence 369998877788999999998754
No 10
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=11.76 E-value=1.2e+02 Score=21.82 Aligned_cols=19 Identities=32% Similarity=0.272 Sum_probs=16.8
Q ss_pred cceeeeCCCCCeEEEEeee
Q 047742 2 EHRAVVNSVQERLSVATAY 20 (91)
Q Consensus 2 ~HRVv~~~~~~R~Sia~F~ 20 (91)
.|.|.+++..+|+.+.+=+
T Consensus 157 ~H~v~N~g~~~RIhLv~D~ 175 (290)
T 1e5r_A 157 VHSAVNFSEISRQSLCVDF 175 (290)
T ss_dssp CEEEEESSSSCCCEEEEEE
T ss_pred eeEEEcCCCCCeEEEEEEe
Confidence 6999999999999988655
Done!