BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>047744
MKGGILEVLLVNAEGIKHTNIFGTPSYYVIARCGNQEHRSKNSMVKGEKAWWNEKFIFEF
PMSDWKLLTHIKFRIMDTELLTDGGFVGETVFSYIHDQTSVNQCRYYLGGIITDQSNDKE
LIEVKPAPYNVLLEDDTYKGQIVIGFKFIVN

High Scoring Gene Products

Symbol, full name Information P value
AT4G00467 protein from Arabidopsis thaliana 4.2e-40
AT3G55470 protein from Arabidopsis thaliana 2.0e-08
AT1G63220 protein from Arabidopsis thaliana 4.8e-07
AT4G34150 protein from Arabidopsis thaliana 0.00022

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  047744
        (151 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:4515103319 - symbol:AT4G00467 "AT4G00467" spec...   427  4.2e-40   1
TAIR|locus:2099946 - symbol:AT3G55470 "AT3G55470" species...   128  2.0e-08   1
TAIR|locus:2038461 - symbol:AT1G63220 "AT1G63220" species...   115  4.8e-07   1
TAIR|locus:2124321 - symbol:AT4G34150 "AT4G34150" species...   104  0.00022   1


>TAIR|locus:4515103319 [details] [associations]
            symbol:AT4G00467 "AT4G00467" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168
            SMART:SM00239 EMBL:CP002687 GenomeReviews:CT486007_GR
            InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004 EMBL:AL161472
            IPI:IPI00891965 RefSeq:NP_001118904.1 UniGene:At.73535
            ProteinModelPortal:B3H4G1 SMR:B3H4G1 EnsemblPlants:AT4G00467.1
            GeneID:6240657 KEGG:ath:AT4G00467 TAIR:At4g00467 eggNOG:NOG280920
            HOGENOM:HOG000064562 OMA:INAKLLY PhylomeDB:B3H4G1
            ProtClustDB:CLSN2925557 Genevestigator:B3H4G1 Uniprot:B3H4G1
        Length = 202

 Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
 Identities = 84/149 (56%), Positives = 106/149 (71%)

Query:     1 MKGGILEVLLVNAEGIKHTNIFGTPSYYVIARCGNQEHRSKNSMVKGEKAWWNEKFIFEF 60
             MK GILEV L++A GI HTN  GTP YYV+ +CG +E+RSK S    + A WN+KF+F+F
Sbjct:     1 MKRGILEVFLIDAHGITHTNFIGTPVYYVLLQCGTKEYRSKMSKGDNDNALWNQKFVFDF 60

Query:    61 PMSDWKLLTHIKFRIMDTELLTDGGFVGETVFSYIHDQTSVNQCRYYLGGIITDQSNDKE 120
             PMS WK LT+IK RI+D EL  DGGFVGET+   IH           LGGIIT+   D+ 
Sbjct:    61 PMSQWKKLTYIKLRILDKELFNDGGFVGETI---IH-----------LGGIITE-GRDRG 105

Query:   121 LIEVKPAPYNVLLEDDTYKGQIVIGFKFI 149
              IE+KPAPYNV+LEDDT+KG++ +G +FI
Sbjct:   106 YIEIKPAPYNVVLEDDTFKGELKVGLRFI 134


>TAIR|locus:2099946 [details] [associations]
            symbol:AT3G55470 "AT3G55470" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0006612 "protein targeting to
            membrane" evidence=RCA] [GO:0009963 "positive regulation of
            flavonoid biosynthetic process" evidence=RCA] [GO:0010363
            "regulation of plant-type hypersensitive response" evidence=RCA]
            InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168 SMART:SM00239
            EMBL:CP002686 GenomeReviews:BA000014_GR InterPro:IPR018029
            SUPFAM:SSF49562 PROSITE:PS50004 EMBL:AL132975 HOGENOM:HOG000005983
            UniGene:At.26631 UniGene:At.35023 EMBL:BT025730 EMBL:AK117139
            IPI:IPI00530875 PIR:T47686 RefSeq:NP_191107.1
            ProteinModelPortal:Q9M2T2 SMR:Q9M2T2 STRING:Q9M2T2 PRIDE:Q9M2T2
            EnsemblPlants:AT3G55470.1 GeneID:824713 KEGG:ath:AT3G55470
            TAIR:At3g55470 InParanoid:Q9M2T2 OMA:NEVFKFQ PhylomeDB:Q9M2T2
            ProtClustDB:CLSN2685296 Genevestigator:Q9M2T2 Uniprot:Q9M2T2
        Length = 156

 Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 43/155 (27%), Positives = 76/155 (49%)

Query:     1 MKGGILEVLLVNAEGIKHTNIFGTPSYYVIARCGNQEHRSKNSMVK---GEKAWWNEKFI 57
             M  GILEV L++ +G+K ++  G    YV  +   Q  +S  S+ K   G    WN+K  
Sbjct:     1 MAVGILEVSLISGKGLKRSDFLGKIDPYVEIQYKGQTRKS--SVAKEDGGRNPTWNDKLK 58

Query:    58 F--EFPMS--DWKLLTHIKFRIMDTELLTDGGFVGETVFSYIHDQTSVNQCRYYLGGIIT 113
             +  EFP S  D+KL+     ++MD +  +   F+GE     +H    V +        + 
Sbjct:    59 WRAEFPGSGADYKLIV----KVMDHDTFSSDDFIGEAT---VH----VKE--------LL 99

Query:   114 DQSNDKELIEVKPAPYNVLLEDDTYKGQIVIGFKF 148
             +   +K   E++P  YN++  D ++ G+++IG  +
Sbjct:   100 EMGVEKGTAELRPTKYNIVDSDLSFVGELLIGVSY 134


>TAIR|locus:2038461 [details] [associations]
            symbol:AT1G63220 "AT1G63220" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168
            SMART:SM00239 EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC022355
            InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004 EMBL:AY054623
            EMBL:AY081504 EMBL:AY085843 IPI:IPI00525156 PIR:H96657
            RefSeq:NP_176511.1 UniGene:At.24672 PDB:1WFJ PDBsum:1WFJ
            ProteinModelPortal:Q9C8S6 SMR:Q9C8S6 PaxDb:Q9C8S6 PRIDE:Q9C8S6
            EnsemblPlants:AT1G63220.1 GeneID:842627 KEGG:ath:AT1G63220
            TAIR:At1g63220 eggNOG:NOG289233 HOGENOM:HOG000005983
            InParanoid:Q9C8S6 OMA:GLENTDF PhylomeDB:Q9C8S6
            ProtClustDB:CLSN2682388 EvolutionaryTrace:Q9C8S6
            Genevestigator:Q9C8S6 GermOnline:AT1G63220 Uniprot:Q9C8S6
        Length = 147

 Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 38/146 (26%), Positives = 68/146 (46%)

Query:     1 MKGGILEVLLVNAEGIKHTNIFGTPSYYVIARCGNQEHRSKNSMVKGEKAWWNEKFIFEF 60
             M  G LEV+LV+A+G++  +       YV   C  Q+ +S  +   G    WNE FIF  
Sbjct:     1 MPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFT- 59

Query:    61 PMSDWKLLTHIKFRIMDTELLTDGGFVGETVFSY--IHDQTSVNQCRYYLGGIITDQSND 118
              +S+    T +K +I D ++ T+   VGE       +  + S+    Y    ++ D+   
Sbjct:    60 -VSEGT--TELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAY---NVVKDEEYK 113

Query:   119 KEL---IEVKPAPYNVL-LEDDTYKG 140
              E+   +  KP+      +++++Y G
Sbjct:   114 GEIWVALSFKPSENRSRGMDEESYGG 139


>TAIR|locus:2124321 [details] [associations]
            symbol:AT4G34150 "AT4G34150" species:3702 "Arabidopsis
            thaliana" [GO:0009409 "response to cold" evidence=IEP] [GO:0005829
            "cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
            [GO:0006612 "protein targeting to membrane" evidence=RCA]
            [GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0009611
            "response to wounding" evidence=RCA] [GO:0009612 "response to
            mechanical stimulus" evidence=RCA] [GO:0009646 "response to absence
            of light" evidence=RCA] [GO:0010200 "response to chitin"
            evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
            response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
            protein response" evidence=RCA] [GO:0043069 "negative regulation of
            programmed cell death" evidence=RCA] [GO:0052542 "defense response
            by callose deposition" evidence=RCA] InterPro:IPR000008
            InterPro:IPR008973 Pfam:PF00168 SMART:SM00239 GO:GO:0005829
            GO:GO:0009506 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009409
            InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004
            InterPro:IPR021934 PROSITE:PS51516 eggNOG:NOG85357 EMBL:AF412098
            EMBL:BT000766 EMBL:BT014883 IPI:IPI00522312 RefSeq:NP_567956.1
            UniGene:At.20546 ProteinModelPortal:Q945K9 SMR:Q945K9 IntAct:Q945K9
            STRING:Q945K9 PaxDb:Q945K9 PRIDE:Q945K9 EnsemblPlants:AT4G34150.1
            GeneID:829563 KEGG:ath:AT4G34150 TAIR:At4g34150
            HOGENOM:HOG000029763 InParanoid:Q945K9 OMA:TDINRDP PhylomeDB:Q945K9
            ProtClustDB:CLSN2721561 Genevestigator:Q945K9 Uniprot:Q945K9
        Length = 247

 Score = 104 (41.7 bits), Expect = 0.00022, P = 0.00022
 Identities = 26/88 (29%), Positives = 43/88 (48%)

Query:     1 MKGGILEVLLVNAEGIKHTNIFGTPSYYVIARCGNQEHRSKNSMVKGEKAWWNEKFIFEF 60
             ++G ILEV +V  + +K T  F     YV+   G + HR++     G+ A + EKFIF  
Sbjct:     7 IQGQILEVTVVGCQKLKDTEWFSRQDPYVVLEYGGRSHRTRTCTDGGKNAVFQEKFIFTL 66

Query:    61 PMSDWKLLTHIKFRIMDTELLTDGGFVG 88
                    L  +K  + ++  L+   F+G
Sbjct:    67 IEG----LRDLKVAVWNSNTLSTDDFIG 90


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.140   0.429    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      151       151   0.00097  104 3  11 22  0.47    31
                                                     30  0.40    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  602 (64 KB)
  Total size of DFA:  160 KB (2095 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  14.77u 0.11s 14.88t   Elapsed:  00:00:02
  Total cpu time:  14.77u 0.11s 14.88t   Elapsed:  00:00:03
  Start:  Mon May 20 17:33:11 2013   End:  Mon May 20 17:33:14 2013

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