Query 047751
Match_columns 580
No_of_seqs 232 out of 1642
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 04:13:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047751.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047751hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zcd_A Na(+)/H(+) antiporter 1 99.9 7.6E-23 2.6E-27 215.7 7.9 297 205-533 58-383 (388)
2 3zux_A Transporter, ASBTNM; tr 98.1 0.0019 6.6E-08 66.8 29.2 105 209-319 43-152 (332)
3 3zux_A Transporter, ASBTNM; tr 82.6 17 0.00058 37.0 13.8 122 402-533 29-155 (332)
4 2l0e_A Sodium/hydrogen exchang 58.3 2.2 7.5E-05 28.5 0.1 28 264-291 3-30 (33)
5 2k3c_A TMIX peptide; membrane 20.0 1.3 4.3E-05 29.6 -6.1 26 384-409 5-30 (33)
6 1b9u_A Protein (ATP synthase); 16.0 2.3E+02 0.0078 18.2 4.4 25 338-362 8-32 (34)
7 1zcd_A Na(+)/H(+) antiporter 1 10.4 2.5E+02 0.0087 29.0 4.9 22 423-444 63-84 (388)
8 3aqp_A Probable secdf protein- 9.1 1.8E+03 0.061 24.4 16.4 151 213-371 576-731 (741)
9 4dx5_A Acriflavine resistance 6.0 2.7E+03 0.091 23.8 18.5 32 243-274 369-400 (1057)
10 2zy9_A Mg2+ transporter MGTE; 5.9 2E+03 0.07 22.3 10.1 14 52-65 171-184 (473)
No 1
>1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A
Probab=99.87 E-value=7.6e-23 Score=215.72 Aligned_cols=297 Identities=13% Similarity=0.053 Sum_probs=218.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCChhHH----HHhhh--HHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhcc
Q 047751 205 VQVETVAQFGVIFLLFALGLEFSTAKL----RVVRA--VAILGGLLQIFLFMCLCGIIASLCGGKPSEGVFVGVLLSMSS 278 (580)
Q Consensus 205 ~~le~la~lGli~llF~~GLeld~~~l----~~~~~--~av~ia~~~~ll~~~l~~~~~~~lg~~~~~al~ig~~ls~TS 278 (580)
...+-+.+-.+.+++|.+|+|+|.+.+ ++.+| .+...++.++++|+++ ++.++....++..-..+...|+
T Consensus 58 ~l~~windglm~lFff~vGLEik~e~l~G~L~~~~~a~~p~~aAlgGmivP~~i----y~~~~~~~~~~~~gw~ip~ATd 133 (388)
T 1zcd_A 58 NMLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALL----YLAFNYADPITREGWAIPAATD 133 (388)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTSSTTTSHHHHHHHHHHTTTTHHH----HGGGCCSSTTHHHHTSSSSCCC
T ss_pred cHHHHHhhHhHHHHHHHHHHHhhHHHhcchhhhhhhHHHHHHHHHHHHHHHHHH----HHHHhcCChhhhhhhHHHHHHH
Confidence 456778889999999999999999877 55555 4677888999999876 2445665566777888888899
Q ss_pred HHHHHHHHhhhccc-CcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 047751 279 TAVVLKFLMERNSI-SALHGQVTIGTLILQDCAVGLLFALLPVLGGSSGVLQGVISMTKSLVTLITFLAILTILSRTCVP 357 (580)
Q Consensus 279 ~~Vv~~iL~e~~~~-~s~~g~l~ls~avl~Dv~~~lllal~~~l~~~~~~~~~~~~~~~~ll~~v~filv~~~v~r~~~~ 357 (580)
.+....++...+.. ++..++.+++.+++||+.+|++++++.. ++. +.. .... .++++++..+
T Consensus 134 IAfal~vL~~lg~~~p~~l~~flLalAvvDDl~aiivIAvfyt----~~~--~~~---~l~~-~~~~~~~~~~------- 196 (388)
T 1zcd_A 134 IAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALFYT----NDL--SMA---SLGV-AAVAIAVLAV------- 196 (388)
T ss_dssp HHHHHHHHHSSCSSSCSSSHHHHHHHHHHHHHHHHHHHHHHSC----CCC--CHH---HHHH-HHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHHc----CCc--cHH---HHHH-HHHHHHHHHH-------
Confidence 99999999998654 5556799999999999999999888632 111 111 1111 1111111111
Q ss_pred HHHHHHHhhccCcchHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHhcCC-----CchhhHHHhHHhHH-HHHHHHH
Q 047751 358 WCLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTT-----DLAQHTLEQVEPIR-NFFAALF 431 (580)
Q Consensus 358 ~l~~~~~~~~~~~~e~~~l~~l~l~l~~~~lae~lGls~~lGaFvaGl~l~~~-----~~~~~l~~~l~~i~-~~f~plF 431 (580)
.+ |. ..++...+..+ .+..++.++..|+|+.+|+|++|+++|.. +..++++++++++. .+++|+|
T Consensus 197 --l~---r~--~v~~~~~y~~l--gl~~w~~~~~sGvHatigg~l~Gl~ip~~~~~~~~~~~~le~~l~p~v~~~ilPlF 267 (388)
T 1zcd_A 197 --LN---LC--GARRTGVYILV--GVVLWTAVLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLILPLF 267 (388)
T ss_dssp --HH---HT--TCCCTHHHHHH--HHHHHHHTTTSHHHHHHHHHHHHHHSCCCGGGSSCHHHHHHHHHHHHHHHTHHHHH
T ss_pred --HH---Hh--cchhHHHHHHH--HHHHHHHHHHhCccHHHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 11 11 11222222223 23556777999999999999999999985 34678999999996 5889999
Q ss_pred -HHHHhhhhhHH---hHhHHHHHHHHHHHHHHHHHHHHHHHHHhhc----------CCChHHHHHHHHHHHhHHHHHHHH
Q 047751 432 -LASIGMLIHVH---FLWNHVDILLAAVLLVIVVKTVVVATVIKGF----------RYSNKTSLLVGMSLAQIGEFAFVL 497 (580)
Q Consensus 432 -Fv~iGl~id~~---~l~~~~~~~l~~vl~~~~~K~l~~~l~~~~~----------~~~~r~a~~lgl~L~~rG~~~lvl 497 (580)
|+..|.++|.. .+.+ ...+.+.+..+++|+++++..++.. |+++||...+|+.++.++++++++
T Consensus 268 aFanaGv~l~~~~~~~l~~--~~~lgi~~glvvGK~~Gi~~~~~l~~rl~~~~lp~g~~~~~~~~vg~L~gigftmsL~I 345 (388)
T 1zcd_A 268 AFANAGVSLQGVTLDGLTS--ILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMVVGILCGIGFTMSIFI 345 (388)
T ss_dssp HHHHCCCCCSSSCCCTHHH--HSSTTTTHHHHHTTGGGSTTHHHHTSSCTTTCCCCSCCGGGGTTHHHHTTCCHHHHHHH
T ss_pred HHHhcCeeecccchhhccC--hHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCCCCCCHHHHHHHHHHhccchHHHHHH
Confidence 99999999874 2222 1223444566899999855555544 899999999999999999999999
Q ss_pred HHHHHhCCC--ChHHHHHHHHHHHHHHHHHHHHHHHhh
Q 047751 498 LSRASNLHL--VEGKLYLLLLGTTALSLVTTPLLFKLI 533 (580)
Q Consensus 498 a~~a~~~gi--i~~~~~~~lv~~vllS~l~~Pll~~l~ 533 (580)
++.+.+.+. +.++.+..++...++|.+++|++.|..
T Consensus 346 a~laf~~~~~~~~~~ak~~il~~s~~s~i~g~~~L~~~ 383 (388)
T 1zcd_A 346 ASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVR 383 (388)
T ss_dssp HHHHSTTSSCSSHHHHHHHHHHHHHTTTSTTTGGGTTT
T ss_pred HHHhccCCchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999998876 356778888888999999999887764
No 2
>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A*
Probab=98.15 E-value=0.0019 Score=66.85 Aligned_cols=105 Identities=13% Similarity=0.179 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHhhcCChhHHHHhhh---HHHHHHHHHHH-HHHHHHHHHHHhcCCChHHHHHHHHHHhhccH-HHHH
Q 047751 209 TVAQFGVIFLLFALGLEFSTAKLRVVRA---VAILGGLLQIF-LFMCLCGIIASLCGGKPSEGVFVGVLLSMSST-AVVL 283 (580)
Q Consensus 209 ~la~lGli~llF~~GLeld~~~l~~~~~---~av~ia~~~~l-l~~~l~~~~~~~lg~~~~~al~ig~~ls~TS~-~Vv~ 283 (580)
.....++.+++|..|+.++.+++++..+ ......+...+ .| ++++.+.++++.+.. ...|.++....| ++.+
T Consensus 43 ~~i~~~l~~~mf~~G~~l~~~~l~~~~~~~~~~~~~l~~~~vi~P-ll~~~l~~~~~l~~~--~~~Glil~~~~P~~~~s 119 (332)
T 3zux_A 43 PYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMP-ATAWCLSKLLNLPAE--IAVGVILVGCCPGGTAS 119 (332)
T ss_dssp GGHHHHHHHHHHHHHHHCCGGGGHHHHHSHHHHHHHHHHHHHHHH-HHHHHHHHHTTCCHH--HHHHHHHHHHSCCCTHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHhCcHHHHHHHHHHHHHHH-HHHHHHHHHhCCChH--HHHHHHHHhcCCchhHH
Confidence 3445688899999999999999985443 33333344443 34 344555566666543 233333322111 1122
Q ss_pred HHHhhhcccCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 047751 284 KFLMERNSISALHGQVTIGTLILQDCAVGLLFALLP 319 (580)
Q Consensus 284 ~iL~e~~~~~s~~g~l~ls~avl~Dv~~~lllal~~ 319 (580)
.++...- +.+. ....+...++.+.+.+...+..
T Consensus 120 ~v~t~~a--~Gd~-~la~~~~~~stll~~~~~Pl~~ 152 (332)
T 3zux_A 120 NVMTYLA--RGNV-ALSVAVTSVSTLTSPLLTPAIF 152 (332)
T ss_dssp HHHHHHT--TCCH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHh--CCCH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 2344432 2332 4666677778877776665443
No 3
>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A*
Probab=82.61 E-value=17 Score=36.99 Aligned_cols=122 Identities=14% Similarity=0.123 Sum_probs=65.0
Q ss_pred HHHHHhcCCCchhhHHHhHHhHHHHHHHHHHHHHhhhhhHHhHhH---HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChH
Q 047751 402 AAGVMISTTDLAQHTLEQVEPIRNFFAALFLASIGMLIHVHFLWN---HVDILLAAVLLVIVVKTVVVATVIKGFRYSNK 478 (580)
Q Consensus 402 vaGl~l~~~~~~~~l~~~l~~i~~~f~plFFv~iGl~id~~~l~~---~~~~~l~~vl~~~~~K~l~~~l~~~~~~~~~r 478 (580)
+.|...|+... .+++.....+.+-+...|++++.+.+.. ++.......+.-++..++.++..++.++.+..
T Consensus 29 ~lg~~~P~~~~------~~~~~i~~~l~~~mf~~G~~l~~~~l~~~~~~~~~~~~~l~~~~vi~Pll~~~l~~~~~l~~~ 102 (332)
T 3zux_A 29 AAAFFAPDTFK------WAGPYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPAE 102 (332)
T ss_dssp HHHHHCGGGTG------GGGGGHHHHHHHHHHHHHHHCCGGGGHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHcchhhh------hhHHHHHHHHHHHHHHHHhCCCHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCCChH
Confidence 56666665311 1234444566667788888998877753 33334444445566677777777777766643
Q ss_pred HHHHHHH-HHHhHHHHHHHHHHHHHhCCCChHHHHHHHH-HHHHHHHHHHHHHHHhh
Q 047751 479 TSLLVGM-SLAQIGEFAFVLLSRASNLHLVEGKLYLLLL-GTTALSLVTTPLLFKLI 533 (580)
Q Consensus 479 ~a~~lgl-~L~~rG~~~lvla~~a~~~gii~~~~~~~lv-~~vllS~l~~Pll~~l~ 533 (580)
...-+-+ +..|-|..+.++... .|- |.+....++ ..++++.++.|++..++
T Consensus 103 ~~~Glil~~~~P~~~~s~v~t~~---a~G-d~~la~~~~~~stll~~~~~Pl~~~l~ 155 (332)
T 3zux_A 103 IAVGVILVGCCPGGTASNVMTYL---ARG-NVALSVAVTSVSTLTSPLLTPAIFLML 155 (332)
T ss_dssp HHHHHHHHHHSCCCTHHHHHHHH---TTC-CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCchhHHHHHHHH---hCC-CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3221111 123444444443322 222 222222222 35666777778777665
No 4
>2l0e_A Sodium/hydrogen exchanger 1; transmembrane helix, membrane protein, NHE1; NMR {Homo sapiens}
Probab=58.30 E-value=2.2 Score=28.46 Aligned_cols=28 Identities=18% Similarity=0.342 Sum_probs=24.1
Q ss_pred hHHHHHHHHHHhhccHHHHHHHHhhhcc
Q 047751 264 PSEGVFVGVLLSMSSTAVVLKFLMERNS 291 (580)
Q Consensus 264 ~~~al~ig~~ls~TS~~Vv~~iL~e~~~ 291 (580)
+..++.+|+++|+|++..+..++++.+.
T Consensus 3 ~~~~llfGAiis~TDpVavlaif~~~~v 30 (33)
T 2l0e_A 3 KKDNLLFGSIISAVDPVAVLAVFEEIHK 30 (33)
T ss_dssp CCCCCTTHHHHTTCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHccCCChHHHHHHHHHcCC
Confidence 4456789999999999999999999874
No 5
>2k3c_A TMIX peptide; membrane peptide, dodecylphosphocholine micelle, NHE1, Na+/H+ transporter, metal transport; NMR {Synthetic}
Probab=19.98 E-value=1.3 Score=29.58 Aligned_cols=26 Identities=19% Similarity=0.273 Sum_probs=22.5
Q ss_pred HHHHHHHHhCchHHHHHHHHHHHhcC
Q 047751 384 LVAWCSDKLGLSLELGSFAAGVMIST 409 (580)
Q Consensus 384 ~~~~lae~lGls~~lGaFvaGl~l~~ 409 (580)
..+.++|.+++|++++.+.+|+.+++
T Consensus 5 ~~Yl~AE~~~lSGIlavv~~Gi~~~~ 30 (33)
T 2k3c_A 5 MAYLSAELFHLSGIMALIASGVVMRP 30 (33)
T ss_dssp TTTGGGSSSTTTTTTTTTTTTSCCCC
T ss_pred HHHHHHHHhCcChHHHHHHHHHHHhh
Confidence 45678899999999999999998875
No 6
>1b9u_A Protein (ATP synthase); membrane protein, hydrolase; HET: GMA; NMR {Synthetic} SCOP: j.35.1.1
Probab=15.96 E-value=2.3e+02 Score=18.18 Aligned_cols=25 Identities=16% Similarity=0.159 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH
Q 047751 338 LVTLITFLAILTILSRTCVPWCLKL 362 (580)
Q Consensus 338 ll~~v~filv~~~v~r~~~~~l~~~ 362 (580)
+...+.|+++.+++.+++.+++.+-
T Consensus 8 ~~~~i~Flil~~~l~kf~~~Pi~~~ 32 (34)
T 1b9u_A 8 LGQAIAFVLFVLFCMKYVWPPLMAA 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445567777788888887776553
No 7
>1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A
Probab=10.39 E-value=2.5e+02 Score=29.01 Aligned_cols=22 Identities=18% Similarity=0.486 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHhhhhhHHhH
Q 047751 423 IRNFFAALFLASIGMLIHVHFL 444 (580)
Q Consensus 423 i~~~f~plFFv~iGl~id~~~l 444 (580)
++|-++.+||..+|+.+|.+.+
T Consensus 63 indglm~lFff~vGLEik~e~l 84 (388)
T 1zcd_A 63 INDALMAVFFLLVGLEVKRELM 84 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHhHHHHHHHHHHHhhHHHh
Confidence 4689999999999999998765
No 8
>3aqp_A Probable secdf protein-export membrane protein; translocon, cell membrane, MEM protein transport, translocation, transmembrane, transport; 3.30A {Thermus thermophilus} PDB: 2rrn_A
Probab=9.14 E-value=1.8e+03 Score=24.43 Aligned_cols=151 Identities=13% Similarity=0.051 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhcCChhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhh-----ccHHHHHHHHh
Q 047751 213 FGVIFLLFALGLEFSTAKLRVVRAVAILGGLLQIFLFMCLCGIIASLCGGKPSEGVFVGVLLSM-----SSTAVVLKFLM 287 (580)
Q Consensus 213 lGli~llF~~GLeld~~~l~~~~~~av~ia~~~~ll~~~l~~~~~~~lg~~~~~al~ig~~ls~-----TS~~Vv~~iL~ 287 (580)
+++++++...-+.+++. ....+++...++.+.+..+.+++|.+......+|.+... -+.-++.++-.
T Consensus 576 lali~i~l~l~~~Fs~~--------~~l~~l~~l~~~~~~~~g~l~l~g~~l~~~~i~~~l~liGisvd~~I~l~~r~re 647 (741)
T 3aqp_A 576 VGLGLILLYVAFRFDWT--------FGVASILAVAHDVAIVAGMYSLLGLEFSIPTIAALLTIVGYSINDSIVVSDRIRE 647 (741)
T ss_dssp HHHHHHHHHHHHHSCHH--------HHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhhcceEEehHHHHH
Q ss_pred hhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhc
Q 047751 288 ERNSISALHGQVTIGTLILQDCAVGLLFALLPVLGGSSGVLQGVISMTKSLVTLITFLAILTILSRTCVPWCLKLMISLS 367 (580)
Q Consensus 288 e~~~~~s~~g~l~ls~avl~Dv~~~lllal~~~l~~~~~~~~~~~~~~~~ll~~v~filv~~~v~r~~~~~l~~~~~~~~ 367 (580)
+++..+..--+-++..++-+-.-..+.-++...+....-...+....-.....+++.+++..+....+.|.++.++.++.
T Consensus 648 ~~~~~~g~~~~eav~~a~~~~~~~il~Tsltt~~g~~~L~~~g~~~~~~~g~~~~~Gl~~~~~~sl~l~Pal~~~~~~~~ 727 (741)
T 3aqp_A 648 NQKLLRHLPYAELVNRSINQTLSRTVMTSLTTLLPILALLFLGGSVLRDFALAIFVGIFVGTYSSIYVVSALVVAWKNRR 727 (741)
T ss_dssp HHHHCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q ss_pred cCcc
Q 047751 368 SQTN 371 (580)
Q Consensus 368 ~~~~ 371 (580)
+..+
T Consensus 728 ~~~~ 731 (741)
T 3aqp_A 728 KAQE 731 (741)
T ss_dssp ----
T ss_pred cccC
No 9
>4dx5_A Acriflavine resistance protein B; multidrug efflux protein, membrane protein, transpor; HET: LMT OCT D10 HEX D12 MIY C14 LMU DD9 UND GOL; 1.90A {Escherichia coli} PDB: 2hrt_A* 2gif_A* 4dx7_A* 4dx6_A* 3noc_A* 1oy6_A* 1oy9_A* 1oyd_A* 1oy8_A* 1oye_A 2rdd_A* 2w1b_A* 3d9b_A 2i6w_A* 3nog_A* 1t9x_A* 1t9t_A* 1t9v_A* 1t9w_A* 1t9u_A* ...
Probab=6.04 E-value=2.7e+03 Score=23.82 Aligned_cols=32 Identities=9% Similarity=0.053 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 047751 243 LLQIFLFMCLCGIIASLCGGKPSEGVFVGVLL 274 (580)
Q Consensus 243 ~~~~ll~~~l~~~~~~~lg~~~~~al~ig~~l 274 (580)
++.+.+.++.+.++.+++|.+....-.+|.++
T Consensus 369 ~~~ip~~~~~~~~~l~~~g~~ln~~sl~gl~~ 400 (1057)
T 4dx5_A 369 TIAVPVVLLGTFAVLAAFGFSINTLTMFGMVL 400 (1057)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHH
Confidence 33344444444555677888665444444433
No 10
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=5.88 E-value=2e+03 Score=22.26 Aligned_cols=14 Identities=0% Similarity=-0.045 Sum_probs=8.2
Q ss_pred cccHHHHHHHHHHh
Q 047751 52 EDSFADMIDRALEK 65 (580)
Q Consensus 52 ~~~~~~~~~~~~~~ 65 (580)
+.|+.+.++..-+.
T Consensus 171 ~~tv~ea~~~~~~~ 184 (473)
T 2zy9_A 171 GMTVEEVLRFLRRA 184 (473)
T ss_dssp TCBHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhc
Confidence 44676666665543
Done!