BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047754
(330 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Q7D|A Chain A, Crystal Structure Of Human Inositol 1,3,4-Trisphosphate
56-Kinase (Itpk1) In Complex With Amppnp And Mn2+
pdb|2Q7D|B Chain B, Crystal Structure Of Human Inositol 1,3,4-Trisphosphate
56-Kinase (Itpk1) In Complex With Amppnp And Mn2+
Length = 346
Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 168/328 (51%), Gaps = 21/328 (6%)
Query: 11 KIGYVFAPNKEQTVIQPSLITKATEQGIGLIRIDPDKPLTEQGPFDCIMHKLY------- 63
++GY + K + + + ++G+ +++++ +P+ EQGP D I+HKL
Sbjct: 20 RVGYWLSEKKIKKLNFQAFAELCRKRGMEVVQLNLSRPIEEQGPLDVIIHKLTDVILEAD 79
Query: 64 -----GPDWTQQLQQFSSRNPDVRIIDPPESIERLHNRDSMLEVVSRLKIELNKEKVSVP 118
+ + Q++ +P+ ++DP +I L +R E++ +++ + +++ P
Sbjct: 80 QNDSQSLELVHRFQEYIDAHPETIVLDPLPAIRTLLDRSKSYELIRKIEAYMEDDRICSP 139
Query: 119 NQAVVSETELVTRDMA--IEELKLRFPLIAKPLEANGSDKSHQMYLIFDNEGLEVLEAPI 176
+ T L D +E+ L FP I K A+G++ SH+M ++F+ EGL ++ P
Sbjct: 140 --PFMELTSLCGDDTMRLLEKNGLTFPFICKTRVAHGTN-SHEMAIVFNQEGLNAIQPPC 196
Query: 177 LLQEFVNHGGIIFKVYVAGSSVKCVKRKSLPDISEEKMKSLKGFLPFSQIS---SNSVDA 233
++Q F+NH +++KV+V G S V+R SL + S F +S S+SV
Sbjct: 197 VVQNFINHNAVLYKVFVVGESYTVVQRPSLKNFSAGTSDRESIFFNSHNVSKPESSSVLT 256
Query: 234 DEEVDLEKTEMPREGFVVELSRALREALGLNLFNFDLIRDAGERDGYLVIDINYLPGYAK 293
+ + E P + + ELSRALR+ALG++LF D+I + + + VIDIN PGY
Sbjct: 257 ELDKIEGVFERPSDEVIRELSRALRQALGVSLFGIDIIIN-NQTGQHAVIDINAFPGYEG 315
Query: 294 LPGYETLLMDFFLNVAKSKAVEEVTSGD 321
+ + T L++ V + ++ +GD
Sbjct: 316 VSEFFTDLLNHIATVLQGQSTAMAATGD 343
>pdb|2QB5|A Chain A, Crystal Structure Of Human Inositol 1,3,4-Trisphosphate
56-Kinase (Itpk1) In Complex With Adp And Mn2+
pdb|2QB5|B Chain B, Crystal Structure Of Human Inositol 1,3,4-Trisphosphate
56-Kinase (Itpk1) In Complex With Adp And Mn2+
Length = 347
Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 168/328 (51%), Gaps = 21/328 (6%)
Query: 11 KIGYVFAPNKEQTVIQPSLITKATEQGIGLIRIDPDKPLTEQGPFDCIMHKLY------- 63
++GY + K + + + ++G+ +++++ +P+ EQGP D I+HKL
Sbjct: 21 RVGYWLSEKKIKKLNFQAFAELCRKRGMEVVQLNLSRPIEEQGPLDVIIHKLTDVILEAD 80
Query: 64 -----GPDWTQQLQQFSSRNPDVRIIDPPESIERLHNRDSMLEVVSRLKIELNKEKVSVP 118
+ + Q++ +P+ ++DP +I L +R E++ +++ + +++ P
Sbjct: 81 QNDSQSLELVHRFQEYIDAHPETIVLDPLPAIRTLLDRSKSYELIRKIEAYMEDDRICSP 140
Query: 119 NQAVVSETELVTRDMA--IEELKLRFPLIAKPLEANGSDKSHQMYLIFDNEGLEVLEAPI 176
+ T L D +E+ L FP I K A+G++ SH+M ++F+ EGL ++ P
Sbjct: 141 --PFMELTSLCGDDTMRLLEKNGLTFPFICKTRVAHGTN-SHEMAIVFNQEGLNAIQPPC 197
Query: 177 LLQEFVNHGGIIFKVYVAGSSVKCVKRKSLPDISEEKMKSLKGFLPFSQIS---SNSVDA 233
++Q F+NH +++KV+V G S V+R SL + S F +S S+SV
Sbjct: 198 VVQNFINHNAVLYKVFVVGESYTVVQRPSLKNFSAGTSDRESIFFNSHNVSKPESSSVLT 257
Query: 234 DEEVDLEKTEMPREGFVVELSRALREALGLNLFNFDLIRDAGERDGYLVIDINYLPGYAK 293
+ + E P + + ELSRALR+ALG++LF D+I + + + VIDIN PGY
Sbjct: 258 ELDKIEGVFERPSDEVIRELSRALRQALGVSLFGIDIIIN-NQTGQHAVIDINAFPGYEG 316
Query: 294 LPGYETLLMDFFLNVAKSKAVEEVTSGD 321
+ + T L++ V + ++ +GD
Sbjct: 317 VSEFFTDLLNHIATVLQGQSTAMAATGD 344
>pdb|2ODT|X Chain X, Structure Of Human Inositol 1,3,4-Trisphosphate 56-Kinase
Length = 328
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 161/321 (50%), Gaps = 21/321 (6%)
Query: 11 KIGYVFAPNKEQTVIQPSLITKATEQGIGLIRIDPDKPLTEQGPFDCIMHKLY------- 63
++GY + K + + + ++G +++++ +P+ EQGP D I+HKL
Sbjct: 10 RVGYWLSEKKIKKLNFQAFAELCRKRGXEVVQLNLSRPIEEQGPLDVIIHKLTDVILEAD 69
Query: 64 -----GPDWTQQLQQFSSRNPDVRIIDPPESIERLHNRDSMLEVVSRLKIELNKEKVSVP 118
+ + Q++ +P+ ++DP +I L +R E++ +++ +++ P
Sbjct: 70 QNDSQSLELVHRFQEYIDAHPETIVLDPLPAIRTLLDRSKSYELIRKIEAYXEDDRICSP 129
Query: 119 NQAVVSETELVTRDMA--IEELKLRFPLIAKPLEANGSDKSHQMYLIFDNEGLEVLEAPI 176
T L D +E+ L FP I K A+G++ SH+ ++F+ EGL ++ P
Sbjct: 130 --PFXELTSLCGDDTXRLLEKNGLTFPFICKTRVAHGTN-SHEXAIVFNQEGLNAIQPPC 186
Query: 177 LLQEFVNHGGIIFKVYVAGSSVKCVKRKSLPDISEEKMKSLKGFLPFSQIS---SNSVDA 233
++Q F+NH +++KV+V G S V+R SL + S F +S S+SV
Sbjct: 187 VVQNFINHNAVLYKVFVVGESYTVVQRPSLKNFSAGTSDRESIFFNSHNVSKPESSSVLT 246
Query: 234 DEEVDLEKTEMPREGFVVELSRALREALGLNLFNFDLIRDAGERDGYLVIDINYLPGYAK 293
+ + E P + + ELSRALR+ALG++LF D+I + + + VIDIN PGY
Sbjct: 247 ELDKIEGVFERPSDEVIRELSRALRQALGVSLFGIDIIIN-NQTGQHAVIDINAFPGYEG 305
Query: 294 LPGYETLLMDFFLNVAKSKAV 314
+ + T L++ V + ++
Sbjct: 306 VSEFFTDLLNHIATVLQGQST 326
>pdb|1Z2N|X Chain X, Inositol 1,3,4-trisphosphate 5/6-kinase Complexed Mg2+/adp
pdb|1Z2O|X Chain X, Inositol 1,3,4-Trisphosphate 56-Kinase In Complex With
Mg2+ADPINS(1,3,4,6)P4
pdb|1Z2P|X Chain X, Inositol 1,3,4-Trisphosphate 56-Kinase In Complex With
Mg2+AMP- PcpINS(1,3,4)P3
Length = 324
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 27/240 (11%)
Query: 70 QLQQFSSRNPDVRIIDPPESIERLHNRDSMLEVVSRLKIELNKEKVSVPNQAVVSETELV 129
+++++ +P V ++ +H+ S E ++ L I K + +PN V E V
Sbjct: 73 EMRKYEKDHPKVLFLES----SAIHDMMSSREEINALLI---KNNIPIPNSFSVKSKEEV 125
Query: 130 TRDMAIEELKLRFPLIAKPLEANGSDKSHQMYLIFDNEGLEVLEAPILLQEFVNHGGIIF 189
+ + ++L L P I KP A G+ +HQM ++ + EG++ + P L Q ++NH I
Sbjct: 126 IQLLQSKQLIL--PFIVKPENAQGTFNAHQMKIVLEQEGIDDIHFPCLCQHYINHNNKIV 183
Query: 190 KVYVAGSSVKCVKRKSLPDISEEKMKSL--------------KGFLPFSQISSNSVDADE 235
KV+ G+++K R SLP++ +KS+ +G + I NS +
Sbjct: 184 KVFCIGNTLKWQTRTSLPNVHRCGIKSVDFNNQHLEDILSWPEGVIDKQDIIENSANRFG 243
Query: 236 EVDLEK---TEMPREGFVVELSRALREALGLNLFNFDLIRDAGERDGYLVIDINYLPGYA 292
LE + E + +L+ +R ALG+ L D I++ E+ LV+D+N P Y
Sbjct: 244 SKILEDPILLNLTSEAEMRDLAYKVRCALGVQLCGIDFIKE-NEQGNPLVVDVNVFPSYG 302
>pdb|2V7Z|A Chain A, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein
From Rattus Norvegicus In Post-Atp Hydrolysis State
pdb|2V7Z|B Chain B, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein
From Rattus Norvegicus In Post-Atp Hydrolysis State
Length = 543
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 24/151 (15%)
Query: 185 GGIIFKVYVAGSSVKCVKRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEM 244
GG F + + KRK DISE K ++++ + + ++ + + +E +
Sbjct: 229 GGEDFDNRMVNHFIAEFKRKHKKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL 287
Query: 245 PREG--FVVELSRALREALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPG 296
EG F ++RA E L +LF L +RDA + D + DI + G ++P
Sbjct: 288 -YEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPK 345
Query: 297 YETLLMDFFLNVAKSKAVEEVTSGDELNESV 327
+ LL DFF +G ELN+S+
Sbjct: 346 IQKLLQDFF-------------NGKELNKSI 363
>pdb|1BA0|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal
1nge 3
Length = 386
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
KRK DISE K ++++ + + ++ + + +E + EG F ++RA E
Sbjct: 246 KRKHKKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL-YEGIDFYTSITRARFE 303
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + DI + G ++P + LL DFF
Sbjct: 304 ELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPKIQKLLQDFF-------- 354
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 355 -----NGKELNKSI 363
>pdb|1YUW|A Chain A, Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214A
MUTANT
Length = 554
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
KRK DISE K ++++ + + ++ + + +E + EG F ++RA E
Sbjct: 246 KRKHKKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL-YEGIDFYTSITRARFE 303
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + DI + G ++P + LL DFF
Sbjct: 304 ELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPKIQKLLQDFF-------- 354
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 355 -----NGKELNKSI 363
>pdb|3C7N|B Chain B, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex
Length = 554
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 24/151 (15%)
Query: 185 GGIIFKVYVAGSSVKCVKRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEM 244
GG F + + KRK DISE K ++++ + + ++ + + +E +
Sbjct: 229 GGEDFDNRMVNHFIAEFKRKHKKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL 287
Query: 245 PREG--FVVELSRALREALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPG 296
EG F ++RA E L +LF L +RDA + D + DI + G ++P
Sbjct: 288 -YEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPK 345
Query: 297 YETLLMDFFLNVAKSKAVEEVTSGDELNESV 327
+ LL DFF +G ELN+S+
Sbjct: 346 IQKLLQDFF-------------NGKELNKSI 363
>pdb|1KAY|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71a Mutant
Length = 381
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
KRK DISE K ++++ + + ++ + + +E + EG F ++RA E
Sbjct: 246 KRKHKKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL-YEGIDFYTSITRARFE 303
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + DI + G ++P + LL DFF
Sbjct: 304 ELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPKIQKLLQDFF-------- 354
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 355 -----NGKELNKSI 363
>pdb|1NGB|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
KRK DISE K ++++ + + ++ + + +E + EG F ++RA E
Sbjct: 246 KRKHKKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL-YEGIDFYTSITRARFE 303
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + DI + G ++P + LL DFF
Sbjct: 304 ELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPKIQKLLQDFF-------- 354
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 355 -----NGKELNKSI 363
>pdb|1KAZ|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71e Mutant
Length = 381
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
KRK DISE K ++++ + + ++ + + +E + EG F ++RA E
Sbjct: 246 KRKHKKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL-YEGIDFYTSITRARFE 303
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + DI + G ++P + LL DFF
Sbjct: 304 ELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPKIQKLLQDFF-------- 354
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 355 -----NGKELNKSI 363
>pdb|1NGG|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
KRK DISE K ++++ + + ++ + + +E + EG F ++RA E
Sbjct: 246 KRKHKKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL-YEGIDFYTSITRARFE 303
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + DI + G ++P + LL DFF
Sbjct: 304 ELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPKIQKLLQDFF-------- 354
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 355 -----NGKELNKSI 363
>pdb|1KAX|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71m Mutant
Length = 381
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
KRK DISE K ++++ + + ++ + + +E + EG F ++RA E
Sbjct: 246 KRKHKKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL-YEGIDFYTSITRARFE 303
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + DI + G ++P + LL DFF
Sbjct: 304 ELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPKIQKLLQDFF-------- 354
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 355 -----NGKELNKSI 363
>pdb|1NGC|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
KRK DISE K ++++ + + ++ + + +E + EG F ++RA E
Sbjct: 246 KRKHKKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL-YEGIDFYTSITRARFE 303
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + DI + G ++P + LL DFF
Sbjct: 304 ELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPKIQKLLQDFF-------- 354
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 355 -----NGKELNKSI 363
>pdb|1NGE|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
KRK DISE K ++++ + + ++ + + +E + EG F ++RA E
Sbjct: 246 KRKHKKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL-YEGIDFYTSITRARFE 303
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + DI + G ++P + LL DFF
Sbjct: 304 ELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPKIQKLLQDFF-------- 354
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 355 -----NGKELNKSI 363
>pdb|1NGA|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 35.0 bits (79), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
KRK DISE K ++++ + + ++ + + +E + EG F ++RA E
Sbjct: 246 KRKHKKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL-YEGIDFYTSITRARFE 303
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + DI + G ++P + LL DFF
Sbjct: 304 ELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPKIQKLLQDFF-------- 354
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 355 -----NGKELNKSI 363
>pdb|2QWN|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi State
pdb|2QWO|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #1
pdb|2QWP|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #2
pdb|2QWQ|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Hydrolyzed Form
pdb|2QWR|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Intact Form
Length = 394
Score = 35.0 bits (79), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
KRK DISE K ++++ + + ++ + + +E + EG F ++RA E
Sbjct: 246 KRKHKKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL-YEGIDFYTSITRARFE 303
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + DI + G ++P + LL DFF
Sbjct: 304 ELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPKIQKLLQDFF-------- 354
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 355 -----NGKELNKSI 363
>pdb|2BUP|A Chain A, T13g Mutant Of The Atpase Fragment Of Bovine Hsc70
Length = 381
Score = 35.0 bits (79), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
KRK DISE K ++++ + + ++ + + +E + EG F ++RA E
Sbjct: 246 KRKHKKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL-YEGIDFYTSITRARFE 303
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + DI + G ++P + LL DFF
Sbjct: 304 ELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPKIQKLLQDFF-------- 354
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 355 -----NGKELNKSI 363
>pdb|3CQX|A Chain A, Chaperone Complex
pdb|3CQX|B Chain B, Chaperone Complex
Length = 386
Score = 35.0 bits (79), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
KRK DISE K ++++ + + ++ + + +E + EG F ++RA E
Sbjct: 251 KRKHKKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL-YEGIDFYTSITRARFE 308
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + DI + G ++P + LL DFF
Sbjct: 309 ELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPKIQKLLQDFF-------- 359
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 360 -----NGKELNKSI 368
>pdb|1NGD|A Chain A, Structural Basis Of The 70-kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
KRK DISE K ++++ + + ++ + + +E + EG F ++RA E
Sbjct: 246 KRKHKKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL-YEGIDFYTSITRARFE 303
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + DI + G ++P + LL DFF
Sbjct: 304 ELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPKIQKLLQDFF-------- 354
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 355 -----NGKELNKSI 363
>pdb|1NGF|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
KRK DISE K ++++ + + ++ + + +E + EG F ++RA E
Sbjct: 246 KRKHKKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL-YEGIDFYTSITRARFE 303
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + DI + G ++P + LL DFF
Sbjct: 304 ELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPKIQKLLQDFF-------- 354
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 355 -----NGKELNKSI 363
>pdb|1NGH|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
KRK DISE K ++++ + + ++ + + +E + EG F ++RA E
Sbjct: 246 KRKHKKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL-YEGIDFYTSITRARFE 303
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + DI + G ++P + LL DFF
Sbjct: 304 ELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPKIQKLLQDFF-------- 354
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 355 -----NGKELNKSI 363
>pdb|1QQO|A Chain A, E175s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
KRK DISE K ++++ + + ++ + + +E + EG F ++RA E
Sbjct: 243 KRKHKKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL-YEGIDFYTSITRARFE 300
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + DI + G ++P + LL DFF
Sbjct: 301 ELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPKIQKLLQDFF-------- 351
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 352 -----NGKELNKSI 360
>pdb|3FZF|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP
pdb|3FZH|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZK|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZL|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZM|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3LDQ|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH SMALL
MOLECULE Inhibitor
pdb|3M3Z|A Chain A, Crystal Structure Of Hsc70/bag1 In Complex With Small
Molecule Inhibitor
Length = 381
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
KRK DISE K ++++ + + ++ + + +E + EG F ++RA E
Sbjct: 246 KRKHKKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL-YEGIDFYTSITRARFE 303
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + DI + G ++P + LL DFF
Sbjct: 304 ELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPKIQKLLQDFF-------- 354
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 355 -----NGKELNKSI 363
>pdb|1HX1|A Chain A, Crystal Structure Of A Bag Domain In Complex With The
Hsc70 Atpase Domain
Length = 400
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
KRK DISE K ++++ + + ++ + + +E + EG F ++RA E
Sbjct: 265 KRKHKKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL-YEGIDFYTSITRARFE 322
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + DI + G ++P + LL DFF
Sbjct: 323 ELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPKIQKLLQDFF-------- 373
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 374 -----NGKELNKSI 382
>pdb|1ATS|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences
The Structure Of The Active Site But Is Not Essential
For Atp Hydrolysis
Length = 386
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
KRK DISE K ++++ + + ++ + + +E + EG F ++RA E
Sbjct: 246 KRKHKKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL-YEGIDFYTSITRARFE 303
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + DI + G ++P + LL DFF
Sbjct: 304 ELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPKIQKLLQDFF-------- 354
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 355 -----NGKELNKSI 363
>pdb|1HPM|A Chain A, How Potassium Affects The Activity Of The Molecular
Chaperone Hsc70. Ii. Potassium Binds Specifically In The
Atpase Active Site
pdb|1NGI|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
pdb|1NGJ|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
pdb|3HSC|A Chain A, Three-Dimensional Structure Of The Atpase Fragment Of A
70k Heat-Shock Cognate Protein
Length = 386
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
KRK DISE K ++++ + + ++ + + +E + EG F ++RA E
Sbjct: 246 KRKHKKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL-YEGIDFYTSITRARFE 303
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + DI + G ++P + LL DFF
Sbjct: 304 ELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPKIQKLLQDFF-------- 354
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 355 -----NGKELNKSI 363
>pdb|1BUP|A Chain A, T13s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 386
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
KRK DISE K ++++ + + ++ + + +E + EG F ++RA E
Sbjct: 246 KRKHKKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL-YEGIDFYTSITRARFE 303
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + DI + G ++P + LL DFF
Sbjct: 304 ELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPKIQKLLQDFF-------- 354
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 355 -----NGKELNKSI 363
>pdb|1ATR|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences
The Structure Of The Active Site But Is Not Essential
For Atp Hydrolysis
Length = 386
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
KRK DISE K ++++ + + ++ + + +E + EG F ++RA E
Sbjct: 246 KRKHKKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL-YEGIDFYTSITRARFE 303
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + DI + G ++P + LL DFF
Sbjct: 304 ELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPKIQKLLQDFF-------- 354
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 355 -----NGKELNKSI 363
>pdb|1BA1|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal
Mutant With Cys 17 Replaced By Lys
Length = 386
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
KRK DISE K ++++ + + ++ + + +E + EG F ++RA E
Sbjct: 246 KRKHKKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL-YEGIDFYTSITRARFE 303
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + DI + G ++P + LL DFF
Sbjct: 304 ELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPKIQKLLQDFF-------- 354
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 355 -----NGKELNKSI 363
>pdb|2QW9|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo
State
pdb|2QW9|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo
State
pdb|2QWL|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Adp
State
pdb|2QWL|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Adp
State
pdb|2QWM|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The AdpVi
State
pdb|2QWM|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The AdpVi
State
Length = 394
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
KRK DISE K ++++ + + ++ + + +E + EG F ++RA E
Sbjct: 246 KRKHKKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL-YEGIDFYTSITRARFE 303
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + DI + G ++P + LL DFF
Sbjct: 304 ELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPKIQKLLQDFF-------- 354
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 355 -----NGKELNKSI 363
>pdb|1QQN|A Chain A, D206s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
KR DISE K ++++ + + ++ + + +E + EG F ++RA E
Sbjct: 243 KRAHAKDISENK-RAVRRLATACERAKRTLSSSTQASIEIDSL-YEGIDFYTSITRARFE 300
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + DI + G ++P + LL DFF
Sbjct: 301 ELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPKIQKLLQDFF-------- 351
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 352 -----NGKELNKSI 360
>pdb|1QQM|A Chain A, D199s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
KR DISE K ++++ + + ++ + + +E + EG F ++RA E
Sbjct: 243 KRAHAKDISENK-RAVRRLRTACERAKRTLSSSTQASIEIDSL-YEGIDFYTSITRARFE 300
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + DI + G ++P + LL DFF
Sbjct: 301 ELNADLFRGTLDPVEKALRDA-KLDKSQIHDIVLVGGSTRIPKIQKLLQDFF-------- 351
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 352 -----NGKELNKSI 360
>pdb|1CE8|A Chain A, Carbamoyl Phosphate Synthetase From Escherichis Coli With
Complexed With The Allosteric Ligand Imp
pdb|1CE8|C Chain C, Carbamoyl Phosphate Synthetase From Escherichis Coli With
Complexed With The Allosteric Ligand Imp
pdb|1CE8|E Chain E, Carbamoyl Phosphate Synthetase From Escherichis Coli With
Complexed With The Allosteric Ligand Imp
pdb|1CE8|G Chain G, Carbamoyl Phosphate Synthetase From Escherichis Coli With
Complexed With The Allosteric Ligand Imp
pdb|1M6V|A Chain A, Crystal Structure Of The G359f (Small Subunit) Point
Mutant Of Carbamoyl Phosphate Synthetase
pdb|1M6V|C Chain C, Crystal Structure Of The G359f (Small Subunit) Point
Mutant Of Carbamoyl Phosphate Synthetase
pdb|1M6V|E Chain E, Crystal Structure Of The G359f (Small Subunit) Point
Mutant Of Carbamoyl Phosphate Synthetase
pdb|1M6V|G Chain G, Crystal Structure Of The G359f (Small Subunit) Point
Mutant Of Carbamoyl Phosphate Synthetase
Length = 1073
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 25/107 (23%)
Query: 87 PESIERLHNRDSMLEVVSRLKIELNKEKVSVPNQAVVSETELVTRDMAIEELK-LRFPLI 145
P++I+R +R+ V RLK++ P A V+ E MA+E+ K + +PL+
Sbjct: 666 PDAIDRAEDRERFQHAVERLKLKQ-------PANATVTAIE-----MAVEKAKEIGYPLV 713
Query: 146 AKPLEANGSDKSHQMYLIFDNEGLEVL---------EAPILLQEFVN 183
+P G M +++D L +AP+LL F++
Sbjct: 714 VRPSYVLG---GRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLD 757
>pdb|1JDB|B Chain B, Carbamoyl Phosphate Synthetase From Escherichia Coli
pdb|1JDB|E Chain E, Carbamoyl Phosphate Synthetase From Escherichia Coli
pdb|1JDB|H Chain H, Carbamoyl Phosphate Synthetase From Escherichia Coli
pdb|1JDB|K Chain K, Carbamoyl Phosphate Synthetase From Escherichia Coli
pdb|1BXR|A Chain A, Structure Of Carbamoyl Phosphate Synthetase Complexed With
The Atp Analog Amppnp
pdb|1BXR|C Chain C, Structure Of Carbamoyl Phosphate Synthetase Complexed With
The Atp Analog Amppnp
pdb|1BXR|E Chain E, Structure Of Carbamoyl Phosphate Synthetase Complexed With
The Atp Analog Amppnp
pdb|1BXR|G Chain G, Structure Of Carbamoyl Phosphate Synthetase Complexed With
The Atp Analog Amppnp
pdb|1C30|A Chain A, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
Subunit Mutation C269s
pdb|1C30|C Chain C, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
Subunit Mutation C269s
pdb|1C30|E Chain E, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
Subunit Mutation C269s
pdb|1C30|G Chain G, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
Subunit Mutation C269s
pdb|1C3O|A Chain A, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
Small Subunit Mutant C269s With Bound Glutamine
pdb|1C3O|C Chain C, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
Small Subunit Mutant C269s With Bound Glutamine
pdb|1C3O|E Chain E, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
Small Subunit Mutant C269s With Bound Glutamine
pdb|1C3O|G Chain G, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
Small Subunit Mutant C269s With Bound Glutamine
pdb|1CS0|A Chain A, Crystal Structure Of Carbamoyl Phosphate Synthetase
Complexed At Cys269 In The Small Subunit With The
Tetrahedral Mimic L-glutamate Gamma-semialdehyde
pdb|1CS0|C Chain C, Crystal Structure Of Carbamoyl Phosphate Synthetase
Complexed At Cys269 In The Small Subunit With The
Tetrahedral Mimic L-glutamate Gamma-semialdehyde
pdb|1CS0|E Chain E, Crystal Structure Of Carbamoyl Phosphate Synthetase
Complexed At Cys269 In The Small Subunit With The
Tetrahedral Mimic L-glutamate Gamma-semialdehyde
pdb|1CS0|G Chain G, Crystal Structure Of Carbamoyl Phosphate Synthetase
Complexed At Cys269 In The Small Subunit With The
Tetrahedral Mimic L-glutamate Gamma-semialdehyde
pdb|1KEE|A Chain A, Inactivation Of The Amidotransferase Activity Of Carbamoyl
Phosphate Synthetase By The Antibiotic Acivicin
pdb|1KEE|C Chain C, Inactivation Of The Amidotransferase Activity Of Carbamoyl
Phosphate Synthetase By The Antibiotic Acivicin
pdb|1KEE|E Chain E, Inactivation Of The Amidotransferase Activity Of Carbamoyl
Phosphate Synthetase By The Antibiotic Acivicin
pdb|1KEE|G Chain G, Inactivation Of The Amidotransferase Activity Of Carbamoyl
Phosphate Synthetase By The Antibiotic Acivicin
pdb|1T36|A Chain A, Crystal Structure Of E. Coli Carbamoyl Phosphate
Synthetase Small Subunit Mutant C248d Complexed With
Uridine 5'-Monophosphate
pdb|1T36|C Chain C, Crystal Structure Of E. Coli Carbamoyl Phosphate
Synthetase Small Subunit Mutant C248d Complexed With
Uridine 5'-Monophosphate
pdb|1T36|E Chain E, Crystal Structure Of E. Coli Carbamoyl Phosphate
Synthetase Small Subunit Mutant C248d Complexed With
Uridine 5'-Monophosphate
pdb|1T36|G Chain G, Crystal Structure Of E. Coli Carbamoyl Phosphate
Synthetase Small Subunit Mutant C248d Complexed With
Uridine 5'-Monophosphate
Length = 1073
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 25/107 (23%)
Query: 87 PESIERLHNRDSMLEVVSRLKIELNKEKVSVPNQAVVSETELVTRDMAIEELK-LRFPLI 145
P++I+R +R+ V RLK++ P A V+ E MA+E+ K + +PL+
Sbjct: 666 PDAIDRAEDRERFQHAVERLKLKQ-------PANATVTAIE-----MAVEKAKEIGYPLV 713
Query: 146 AKPLEANGSDKSHQMYLIFDNEGLEVL---------EAPILLQEFVN 183
+P G M +++D L +AP+LL F++
Sbjct: 714 VRPSYVLG---GRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLD 757
>pdb|3GDQ|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein
1-Like Atpase Domain In Complex With Adp And Inorganic
Phosphate
Length = 408
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 24/151 (15%)
Query: 185 GGIIFKVYVAGSSVKCVKRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEM 244
GG F + V+ KRK DIS+ K ++++ + + ++ + + +LE +
Sbjct: 253 GGEDFDNRLVSHFVEEFKRKHKKDISQNK-RAVRRLRTACERAKRTLSSSTQANLEIDSL 311
Query: 245 PREG--FVVELSRALREALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPG 296
EG F ++RA E L +LF L +RDA + D + DI + G ++P
Sbjct: 312 -YEGIDFYTSITRARFEELCADLFRGTLEPVEKALRDA-KMDKAKIHDIVLVGGSTRIPK 369
Query: 297 YETLLMDFFLNVAKSKAVEEVTSGDELNESV 327
+ LL D+F +G +LN+S+
Sbjct: 370 VQRLLQDYF-------------NGRDLNKSI 387
>pdb|1S3X|A Chain A, The Crystal Structure Of The Human Hsp70 Atpase Domain
Length = 382
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 24/151 (15%)
Query: 185 GGIIFKVYVAGSSVKCVKRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEM 244
GG F + V+ KRK DIS+ K ++++ + + ++ + + LE +
Sbjct: 229 GGEDFDNRLVNHFVEEFKRKHKKDISQNK-RAVRRLRTACERAKRTLSSSTQASLEIDSL 287
Query: 245 PREG--FVVELSRALREALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPG 296
EG F ++RA E L +LF L +RDA + D + D+ + G ++P
Sbjct: 288 -FEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDA-KLDKAQIHDLVLVGGSTRIPK 345
Query: 297 YETLLMDFFLNVAKSKAVEEVTSGDELNESV 327
+ LL DFF +G +LN+S+
Sbjct: 346 VQKLLQDFF-------------NGRDLNKSI 363
>pdb|3D2F|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70
pdb|3D2F|D Chain D, Crystal Structure Of A Complex Of Sse1p And Hsp70
Length = 382
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 24/151 (15%)
Query: 185 GGIIFKVYVAGSSVKCVKRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEM 244
GG F + V+ KRK DIS+ K ++++ + + ++ + + LE +
Sbjct: 229 GGEDFDNRLVNHFVEEFKRKHKKDISQNK-RAVRRLRTACERAKRTLSSSTQASLEIDSL 287
Query: 245 PREG--FVVELSRALREALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPG 296
EG F ++RA E L +LF L +RDA + D + D+ + G ++P
Sbjct: 288 -FEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDA-KLDKAQIHDLVLVGGSTRIPK 345
Query: 297 YETLLMDFFLNVAKSKAVEEVTSGDELNESV 327
+ LL DFF +G +LN+S+
Sbjct: 346 VQKLLQDFF-------------NGRDLNKSI 363
>pdb|2E8A|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In
Complex With Amp-Pnp
Length = 391
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 24/151 (15%)
Query: 185 GGIIFKVYVAGSSVKCVKRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEM 244
GG F + V+ KRK DIS+ K ++++ + + ++ + + LE +
Sbjct: 232 GGEDFDNRLVNHFVEEFKRKHKKDISQNK-RAVRRLRTACERAKRTLSSSTQASLEIDSL 290
Query: 245 PREG--FVVELSRALREALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPG 296
EG F ++RA E L +LF L +RDA + D + D+ + G ++P
Sbjct: 291 -FEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDA-KLDKAQIHDLVLVGGSTRIPK 348
Query: 297 YETLLMDFFLNVAKSKAVEEVTSGDELNESV 327
+ LL DFF +G +LN+S+
Sbjct: 349 VQKLLQDFF-------------NGRDLNKSI 366
>pdb|2E88|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In The
Apo Form
Length = 391
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 24/151 (15%)
Query: 185 GGIIFKVYVAGSSVKCVKRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEM 244
GG F + V+ KRK DIS+ K ++++ + + ++ + + LE +
Sbjct: 232 GGEDFDNRLVNHFVEEFKRKHKKDISQNK-RAVRRLRTACERAKRTLSSSTQASLEIDSL 290
Query: 245 PREG--FVVELSRALREALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPG 296
EG F ++RA E L +LF L +RDA + D + D+ + G ++P
Sbjct: 291 -FEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDA-KLDKAQIHDLVLVGGSTRIPK 348
Query: 297 YETLLMDFFLNVAKSKAVEEVTSGDELNESV 327
+ LL DFF +G +LN+S+
Sbjct: 349 VQKLLQDFF-------------NGRDLNKSI 366
>pdb|1HJO|A Chain A, Atpase Domain Of Human Heat Shock 70kda Protein 1
Length = 380
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 24/151 (15%)
Query: 185 GGIIFKVYVAGSSVKCVKRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEM 244
GG F + V+ KRK DIS+ K ++++ + + ++ + + LE +
Sbjct: 227 GGEDFDNRLVNHFVEEFKRKHKKDISQNK-RAVRRLRTACERAKRTLSSSTQASLEIDSL 285
Query: 245 PREG--FVVELSRALREALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPG 296
EG F ++RA E L +LF L +RDA + D + D+ + G ++P
Sbjct: 286 -FEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDA-KLDKAQIHDLVLVGGSTRIPK 343
Query: 297 YETLLMDFFLNVAKSKAVEEVTSGDELNESV 327
+ LL DFF +G +LN+S+
Sbjct: 344 VQKLLQDFF-------------NGRDLNKSI 361
>pdb|3A8Y|A Chain A, Crystal Structure Of The Complex Between The Bag5 Bd5 And
Hsp70 Nbd
pdb|3A8Y|B Chain B, Crystal Structure Of The Complex Between The Bag5 Bd5 And
Hsp70 Nbd
pdb|3ATU|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp- And Mg
Ion-Bound State
pdb|3ATV|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp-Bound And
Mg Ion-Free State
pdb|3AY9|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp-, Mg Ion-,
And K Ion- Bound State
Length = 392
Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 24/151 (15%)
Query: 185 GGIIFKVYVAGSSVKCVKRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEM 244
GG F + V+ KRK DIS+ K ++++ + + ++ + + LE +
Sbjct: 233 GGEDFDNRLVNHFVEEFKRKHKKDISQNK-RAVRRLRTACERAKRTLSSSTQASLEIDSL 291
Query: 245 PREG--FVVELSRALREALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPG 296
EG F ++RA E L +LF L +RDA + D + D+ + G ++P
Sbjct: 292 -FEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDA-KLDKAQIHDLVLVGGSTRIPK 349
Query: 297 YETLLMDFFLNVAKSKAVEEVTSGDELNESV 327
+ LL DFF +G +LN+S+
Sbjct: 350 VQKLLQDFF-------------NGRDLNKSI 367
>pdb|1XQS|C Chain C, Crystal Structure Of The Hspbp1 Core Domain Complexed With
The Fragment Of Hsp70 Atpase Domain
pdb|1XQS|D Chain D, Crystal Structure Of The Hspbp1 Core Domain Complexed With
The Fragment Of Hsp70 Atpase Domain
Length = 191
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 11/129 (8%)
Query: 185 GGIIFKVYVAGSSVKCVKRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEM 244
GG F + V+ KRK DIS+ K ++++ + + ++ + + LE +
Sbjct: 49 GGEDFDNRLVNHFVEEFKRKHKKDISQNK-RAVRRLRTACERAKRTLSSSTQASLEIDSL 107
Query: 245 PREG--FVVELSRALREALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPG 296
EG F ++RA E L +LF L +RDA + D + D+ + G ++P
Sbjct: 108 F-EGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDA-KLDKAQIHDLVLVGGSTRIPK 165
Query: 297 YETLLMDFF 305
+ LL DFF
Sbjct: 166 VQKLLQDFF 174
>pdb|3D2E|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
pdb|3D2E|D Chain D, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
Length = 382
Score = 31.2 bits (69), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 24/151 (15%)
Query: 185 GGIIFKVYVAGSSVKCVKRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEM 244
GG F + V+ KRK DIS+ K ++++ + + ++ + + LE +
Sbjct: 229 GGEDFDNRLVNHFVEEFKRKHKKDISQNK-RAVRRLRTACERAKRTLSSSTQASLEIDSL 287
Query: 245 PREG--FVVELSRALREALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPG 296
EG F ++RA E L +LF L +RDA + D + D+ + G ++P
Sbjct: 288 -FEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDA-KLDKAQIHDLVLVGGSTRIPK 345
Query: 297 YETLLMDFFLNVAKSKAVEEVTSGDELNESV 327
+ LL DFF +G +LN+S+
Sbjct: 346 VQKLLQDFF-------------NGRDLNKSI 363
>pdb|3JXU|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1a
(Hsp70-1) Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 409
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 11/129 (8%)
Query: 185 GGIIFKVYVAGSSVKCVKRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEM 244
GG F + V+ KRK DIS+ K ++++ + + ++ + + LE +
Sbjct: 251 GGEDFDNRLVNHFVEEFKRKHKKDISQNK-RAVRRLRTACERAKRTLSSSTQASLEIDSL 309
Query: 245 PREG--FVVELSRALREALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPG 296
EG F ++RA E L +LF L +RDA + D + D+ + G ++P
Sbjct: 310 -FEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDA-KLDKAQIHDLVLVGGSTRIPK 367
Query: 297 YETLLMDFF 305
+ LL DFF
Sbjct: 368 VQKLLQDFF 376
>pdb|1A9X|A Chain A, Carbamoyl Phosphate Synthetase: Caught In The Act Of
Glutamine Hydrolysis
pdb|1A9X|C Chain C, Carbamoyl Phosphate Synthetase: Caught In The Act Of
Glutamine Hydrolysis
pdb|1A9X|E Chain E, Carbamoyl Phosphate Synthetase: Caught In The Act Of
Glutamine Hydrolysis
pdb|1A9X|G Chain G, Carbamoyl Phosphate Synthetase: Caught In The Act Of
Glutamine Hydrolysis
Length = 1073
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 25/107 (23%)
Query: 87 PESIERLHNRDSMLEVVSRLKIELNKEKVSVPNQAVVSETELVTRDMAIEELK-LRFPLI 145
P++I+R +R+ V RLK++ P A V+ E MA+E+ K + +PL+
Sbjct: 666 PDAIDRAEDRERFQHAVERLKLKQ-------PANATVTAIE-----MAVEKAKEIGYPLV 713
Query: 146 AKPLEANGSDKSHQMYLIFDNEGLEVL---------EAPILLQEFVN 183
+ G M +++D L +AP+LL F++
Sbjct: 714 VRASYVLG---GRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLD 757
>pdb|3FE1|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
pdb|3FE1|B Chain B, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
pdb|3FE1|C Chain C, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 403
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 24/134 (17%)
Query: 202 KRKSLPDISEEKMKSLKGFLPFSQISSNSVDADEEVDLEKTEMPREG--FVVELSRALRE 259
+RK D+S K ++L+ + + ++ + + LE + EG F ++RA E
Sbjct: 266 RRKHGKDLSGNK-RALRRLRTACERAKRTLSSSTQATLEIDSLF-EGVDFYTSITRARFE 323
Query: 260 ALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLMDFFLNVAKSKA 313
L +LF L +RDA + D + D+ + G ++P + LL DFF
Sbjct: 324 ELCSDLFRSTLEPVEKALRDA-KLDKAQIHDVVLVGGSTRIPKVQKLLQDFF-------- 374
Query: 314 VEEVTSGDELNESV 327
+G ELN+S+
Sbjct: 375 -----NGKELNKSI 383
>pdb|1BHY|A Chain A, Low Temperature Middle Resolution Structure Of P64k From
Masc Data
Length = 482
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 118 PNQAVVSETELVTRDMAIEELKLRFPLIAKPLE-ANGSDKSHQMYLIFDNE 167
P A V ETEL + A + K FP A ANG DK LIFD E
Sbjct: 366 PEVAWVGETELSAKASARKITKANFPWAASGRAIANGCDKPFTK-LIFDAE 415
>pdb|4FSV|A Chain A, Crystal Structure Of A Heat Shock 70kda Protein 2 (Hspa2)
From Homo Sapiens At 1.80 A Resolution
Length = 387
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 20/85 (23%)
Query: 249 FVVELSRALREALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLM 302
F ++RA E L +LF L +RDA + D + +I + G ++P + LL
Sbjct: 296 FYTSITRARFEELNADLFRGTLEPVEKALRDA-KLDKGQIQEIVLVGGSTRIPKIQKLLQ 354
Query: 303 DFFLNVAKSKAVEEVTSGDELNESV 327
DFF +G ELN+S+
Sbjct: 355 DFF-------------NGKELNKSI 366
>pdb|3I33|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 2
(Hsp70-2) Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 404
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 20/85 (23%)
Query: 249 FVVELSRALREALGLNLFNFDL------IRDAGERDGYLVIDINYLPGYAKLPGYETLLM 302
F ++RA E L +LF L +RDA + D + +I + G ++P + LL
Sbjct: 314 FYTSITRARFEELNADLFRGTLEPVEKALRDA-KLDKGQIQEIVLVGGSTRIPKIQKLLQ 372
Query: 303 DFFLNVAKSKAVEEVTSGDELNESV 327
DFF +G ELN+S+
Sbjct: 373 DFF-------------NGKELNKSI 384
>pdb|2V2G|A Chain A, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V2G|B Chain B, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V2G|C Chain C, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V2G|D Chain D, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V32|A Chain A, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V32|B Chain B, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V32|C Chain C, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V32|D Chain D, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V41|A Chain A, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|B Chain B, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|C Chain C, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|D Chain D, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|E Chain E, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|F Chain F, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|G Chain G, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|H Chain H, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
Length = 233
Score = 27.7 bits (60), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 14/117 (11%)
Query: 27 PSLITKATEQGIGLIRIDPDKPLTEQGPFDCIMHKLYGPDWTQQLQQFSSRNPDVRIIDP 86
P + + E + L +DPD+ + P C + GPD +L I
Sbjct: 97 PIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLS-----------ILY 145
Query: 87 PESIERLHNRDSMLEVVSRLKIELNKEKVSVPNQAVVSETELVTRDMAIEELKLRFP 143
P + R N +L V+ L++ K KV+ P + +V ++ EE K FP
Sbjct: 146 PATTGR--NFSEILRVIDSLQLTAQK-KVATPADWQPGDRCMVVPGVSAEEAKTLFP 199
>pdb|3CF4|A Chain A, Structure Of The Codh Component Of The M. Barkeri Acds
Complex
Length = 807
Score = 27.7 bits (60), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 18/121 (14%)
Query: 42 RIDPDKPLTEQG--------PFDCIM-HKLYGPDWTQQLQQFSSRNPDVRI-------ID 85
+ DP+ PL E G PF C++ H + G + + ++ + I ID
Sbjct: 223 KADPEAPLVEIGMGTIDKSKPFLCVIGHNVAGVTYMMDYMEDNNLTDKMEIAGLCCTAID 282
Query: 86 PPESIERLHNRDSMLEVVSRLKIELNKEKVSVPNQAVVSETELVTRDMAIEELKLRFPLI 145
E R +V+ + EL + +P+ VV E + V D+ E KL+ P+I
Sbjct: 283 LTRYKEA-DRRPPYAKVIGSMSKELKVIRSGMPDVIVVDE-QCVRGDIVPEAQKLKIPVI 340
Query: 146 A 146
A
Sbjct: 341 A 341
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.136 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,822,940
Number of Sequences: 62578
Number of extensions: 413395
Number of successful extensions: 1291
Number of sequences better than 100.0: 57
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 1277
Number of HSP's gapped (non-prelim): 57
length of query: 330
length of database: 14,973,337
effective HSP length: 99
effective length of query: 231
effective length of database: 8,778,115
effective search space: 2027744565
effective search space used: 2027744565
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)