Query 047759
Match_columns 102
No_of_seqs 102 out of 332
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 04:21:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047759.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047759hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ydu_A AT5G01610; DUF538, stru 100.0 2.7E-35 9.4E-40 217.2 5.2 84 16-102 49-132 (170)
2 3k9d_A LMO1179 protein, aldehy 54.2 9.8 0.00033 30.3 3.3 31 7-37 137-174 (464)
3 3r64_A NAD dependent benzaldeh 52.5 11 0.00037 30.5 3.3 30 7-36 177-210 (508)
4 3b4w_A Aldehyde dehydrogenase; 44.1 17 0.00058 29.3 3.2 31 7-37 175-208 (495)
5 2d4e_A 5-carboxymethyl-2-hydro 43.6 18 0.00061 29.3 3.3 31 7-37 191-224 (515)
6 4dng_A Uncharacterized aldehyd 43.3 20 0.00067 28.6 3.5 30 7-36 172-205 (485)
7 1uzb_A 1-pyrroline-5-carboxyla 42.5 17 0.00058 29.4 3.0 31 7-37 202-235 (516)
8 3k2w_A Betaine-aldehyde dehydr 42.4 19 0.00064 29.0 3.3 30 7-36 177-209 (497)
9 1bxs_A Aldehyde dehydrogenase; 42.3 16 0.00054 29.6 2.8 31 7-37 188-221 (501)
10 2w8n_A Succinate-semialdehyde 42.2 16 0.00055 29.3 2.8 30 7-36 175-207 (487)
11 1o04_A Aldehyde dehydrogenase, 42.1 16 0.00054 29.5 2.8 31 7-37 187-220 (500)
12 3qth_A Uncharacterized protein 42.0 12 0.00043 26.9 2.0 15 19-33 144-158 (176)
13 1a4s_A ALDH, betaine aldehyde 41.6 20 0.00067 29.0 3.3 31 7-37 184-217 (503)
14 2o2p_A Formyltetrahydrofolate 41.1 20 0.00068 29.1 3.3 31 7-37 207-240 (517)
15 4e3x_A Delta-1-pyrroline-5-car 41.1 22 0.00075 29.3 3.5 31 6-36 227-260 (563)
16 2npb_A Selenoprotein W; struct 39.8 31 0.0011 22.3 3.5 37 19-65 21-59 (96)
17 3rh9_A Succinate-semialdehyde 39.0 21 0.00072 28.9 3.1 31 7-37 176-209 (506)
18 3ros_A NAD-dependent aldehyde 38.5 21 0.00072 28.7 3.0 30 7-36 152-184 (484)
19 2wme_A BADH, betaine aldehyde 37.3 21 0.00072 28.8 2.8 30 7-36 171-203 (490)
20 3ed6_A Betaine aldehyde dehydr 36.8 22 0.00075 28.9 2.8 30 7-36 199-231 (520)
21 3i44_A Aldehyde dehydrogenase; 36.4 26 0.0009 28.2 3.3 30 7-36 190-222 (497)
22 3r31_A BADH, betaine aldehyde 36.2 25 0.00085 28.6 3.1 31 7-37 179-212 (517)
23 4e4g_A Methylmalonate-semialde 35.8 28 0.00097 28.2 3.4 30 7-36 191-223 (521)
24 2ve5_A BADH, betaine aldehyde 35.7 23 0.00079 28.2 2.8 30 7-36 171-203 (490)
25 3ty7_A Putative aldehyde dehyd 35.5 24 0.00082 28.1 2.8 30 7-36 168-200 (478)
26 2nzc_A Hypothetical protein; s 35.2 9.4 0.00032 24.7 0.3 17 83-99 66-82 (86)
27 2f9z_C Protein (chemotaxis met 34.7 46 0.0016 23.4 3.9 38 17-58 106-149 (159)
28 3ju8_A Succinylglutamic semial 34.6 31 0.0011 27.6 3.4 30 7-36 168-200 (490)
29 2oqm_A Hypothetical protein; s 34.5 16 0.00056 26.7 1.6 15 19-33 163-177 (192)
30 2imp_A Lactaldehyde dehydrogen 33.8 26 0.00089 27.9 2.8 30 7-36 171-203 (479)
31 3prl_A NADP-dependent glyceral 33.5 31 0.001 27.9 3.2 31 7-37 181-214 (505)
32 3ifg_A Succinate-semialdehyde 33.4 27 0.00093 28.0 2.9 31 7-37 177-210 (484)
33 3iwj_A Putative aminoaldehyde 33.3 27 0.00091 28.1 2.8 31 7-37 180-213 (503)
34 1t90_A MMSDH, probable methylm 33.2 32 0.0011 27.5 3.3 31 7-37 170-203 (486)
35 2k8q_A Protein SHQ1; beta-sand 32.8 34 0.0012 23.6 3.0 18 41-58 63-80 (134)
36 3ek1_A Aldehyde dehydrogenase; 32.6 33 0.0011 27.7 3.2 30 7-36 197-229 (504)
37 1euh_A NADP dependent non phos 32.5 29 0.001 27.6 2.9 31 7-37 172-205 (475)
38 2p0g_A Selenoprotein W-related 32.1 69 0.0024 21.1 4.3 35 20-64 23-58 (105)
39 3jz4_A Succinate-semialdehyde 31.5 30 0.001 27.6 2.8 30 7-36 174-206 (481)
40 3p7j_A Heterochromatin protein 31.2 32 0.0011 22.1 2.4 29 25-56 17-45 (87)
41 3my7_A Alcohol dehydrogenase/a 31.0 38 0.0013 26.7 3.3 30 7-36 132-168 (452)
42 3qan_A 1-pyrroline-5-carboxyla 31.0 38 0.0013 27.6 3.4 31 7-37 201-234 (538)
43 2oka_A Hypothetical protein; P 30.8 67 0.0023 21.1 4.1 35 20-64 25-60 (104)
44 3u4j_A NAD-dependent aldehyde 29.9 33 0.0011 27.9 2.8 30 7-36 190-222 (528)
45 1uxt_A Glyceraldehyde-3-phosph 29.6 40 0.0014 27.1 3.3 31 7-37 186-219 (501)
46 3etf_A Putative succinate-semi 29.0 40 0.0014 26.6 3.1 30 7-36 155-187 (462)
47 3hg9_A PILM; structural genomi 28.9 54 0.0019 22.5 3.4 61 26-91 43-103 (131)
48 2r41_A Uncharacterized protein 28.9 1.3E+02 0.0045 20.1 5.4 37 19-57 30-66 (110)
49 3eud_A Protein SHQ1; CS domain 28.3 48 0.0016 22.5 3.0 31 27-58 64-94 (115)
50 4h3u_A Hypothetical protein; s 28.1 26 0.00091 22.8 1.7 18 20-37 139-156 (158)
51 2e2s_A Agelenin; cystine knot, 27.3 20 0.00069 19.7 0.8 13 89-101 19-31 (36)
52 3dex_A SAV_2001; alpha-beta pr 26.9 98 0.0033 20.5 4.3 32 19-58 31-63 (107)
53 1nrv_A Growth factor receptor- 26.3 33 0.0011 21.3 1.9 26 10-36 7-32 (105)
54 1ulr_A Putative acylphosphatas 25.7 57 0.002 20.2 2.9 21 39-59 29-49 (88)
55 2f68_X Collagen adhesin; beta 23.8 75 0.0026 24.1 3.7 34 42-78 230-263 (313)
56 1rja_A Tyrosine-protein kinase 22.9 39 0.0013 20.8 1.7 25 11-36 5-29 (100)
57 3q9p_A Heat shock protein beta 22.5 50 0.0017 20.0 2.1 33 24-59 52-84 (85)
58 3pqz_A Growth factor receptor- 22.3 44 0.0015 21.1 1.9 26 10-36 16-41 (117)
59 1aot_F FYN protein-tyrosine ki 22.2 43 0.0015 20.7 1.8 26 10-36 7-32 (106)
60 2fhm_A Probable acylphosphatas 22.0 61 0.0021 20.1 2.5 20 39-58 29-48 (91)
61 3kf6_B Protein TEN1; OB fold, 21.7 77 0.0026 21.2 3.0 49 40-100 30-84 (105)
62 2fa8_A Hypothetical protein AT 21.5 83 0.0028 20.6 3.1 35 20-64 27-62 (105)
63 2bjd_A Acylphosphatase; hypert 21.4 67 0.0023 20.5 2.6 20 39-58 41-60 (101)
64 4f9i_A Proline dehydrogenase/d 21.2 71 0.0024 28.5 3.5 30 7-36 695-727 (1026)
65 2j6l_A Aldehyde dehydrogenase 20.8 58 0.002 26.1 2.7 31 7-37 186-223 (500)
66 4ghk_A Gamma-glutamyl phosphat 20.7 60 0.002 25.6 2.7 31 7-37 164-201 (444)
67 2odb_B Serine/threonine-protei 20.5 77 0.0026 16.6 2.3 14 40-53 11-24 (35)
68 2y53_A Aldehyde dehydrogenase 20.2 71 0.0024 25.8 3.0 30 7-36 180-213 (534)
69 2aug_A Growth factor receptor- 20.2 62 0.0021 21.1 2.3 27 9-36 27-53 (126)
70 2vh7_A Acylphosphatase-1; hydr 20.0 76 0.0026 20.0 2.6 20 39-58 35-54 (99)
No 1
>1ydu_A AT5G01610; DUF538, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG unknown function; NMR {Arabidopsis thaliana} SCOP: b.162.1.1
Probab=100.00 E-value=2.7e-35 Score=217.23 Aligned_cols=84 Identities=25% Similarity=0.489 Sum_probs=80.5
Q ss_pred cchhhHHHHHHhCCCCCCCcCCCCceEEEEEccccEEEEEecCeEEEEEeecCeEEEEceEEEEEEecCceeccceeEEE
Q 047759 16 EGLKLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEHEFKMISKLVSYDTEINGYVDKMKIKKLRGVKAK 95 (102)
Q Consensus 16 ~~~~~a~elL~~~gLP~GLLP~~~V~~y~l~~~tG~f~v~l~~~c~~~f~~~~~~v~Y~~~ItG~l~~g~i~~L~GVk~k 95 (102)
.+++++||+|++||||+|||| ++|++|+||++||+|||+|+++|+|.|+. +++|+|+++|||+|++|+|++|+||++|
T Consensus 49 ~~~~ta~elL~e~gLP~GLLP-~~V~~Y~l~~~tG~f~V~l~~~C~~~f~~-~~~v~Y~~~VtG~l~~GkI~~L~GVk~K 126 (170)
T 1ydu_A 49 KMQKPLPELLKEYDLPIGIFP-GDATNYEFDEETKKLTVLIPSICEVGYKD-SSVLKFTTTVTGHLEKGKLTDVEGIKTK 126 (170)
T ss_dssp TTTSSCHHHHHHHSCTTCTTT-SSSCEEEECTTTCSEEEECSSCEEEESTT-SSEEEECSEEEEEECSSCEEEEESCEEE
T ss_pred cccccHHHHHHHcCCCCCcCC-CCCeEEEEECCCcEEEEEeCCCEEEEecC-ccEEEEcCEEEEEEcCCcCccccCEEEE
Confidence 367899999999999999999 79999999999999999999999999985 8999999999999999999999999999
Q ss_pred EEeecCC
Q 047759 96 ELMLWPP 102 (102)
Q Consensus 96 ~lf~W~~ 102 (102)
+| +|+|
T Consensus 127 ~L-lWv~ 132 (170)
T 1ydu_A 127 VM-IWVK 132 (170)
T ss_dssp SS-SEES
T ss_pred EE-EEee
Confidence 99 9986
No 2
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=54.17 E-value=9.8 Score=30.28 Aligned_cols=31 Identities=26% Similarity=0.333 Sum_probs=24.3
Q ss_pred ccEEEeccccchhhHH-------HHHHhCCCCCCCcCC
Q 047759 7 GGIVKKGHEEGLKLAV-------SLLKKFELPEGLLPL 37 (102)
Q Consensus 7 ~a~v~~g~~~~~~~a~-------elL~~~gLP~GLLP~ 37 (102)
++.|+++++.+..++. +++.+.|||.|++-.
T Consensus 137 N~VVlKps~~ap~t~~~l~~ll~~~~~~aG~P~gvv~v 174 (464)
T 3k9d_A 137 NSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISC 174 (464)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEE
T ss_pred CeEEEECCcchHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 5778888887776654 567999999999863
No 3
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=52.47 E-value=11 Score=30.50 Aligned_cols=30 Identities=13% Similarity=0.314 Sum_probs=24.4
Q ss_pred ccEEEeccccchhhH----HHHHHhCCCCCCCcC
Q 047759 7 GGIVKKGHEEGLKLA----VSLLKKFELPEGLLP 36 (102)
Q Consensus 7 ~a~v~~g~~~~~~~a----~elL~~~gLP~GLLP 36 (102)
++.|++..+.+..++ .++|++.|||.|.+-
T Consensus 177 N~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~ 210 (508)
T 3r64_A 177 NAVVIKPASDTPVTGGVIPARIFEEAGVPAGVIS 210 (508)
T ss_dssp CEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEE
T ss_pred CEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEE
Confidence 567888888776555 789999999999875
No 4
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=44.09 E-value=17 Score=29.30 Aligned_cols=31 Identities=29% Similarity=0.352 Sum_probs=23.9
Q ss_pred ccEEEeccccchhh---HHHHHHhCCCCCCCcCC
Q 047759 7 GGIVKKGHEEGLKL---AVSLLKKFELPEGLLPL 37 (102)
Q Consensus 7 ~a~v~~g~~~~~~~---a~elL~~~gLP~GLLP~ 37 (102)
++.|++..+.+..+ +.++|++.|||.|.+-.
T Consensus 175 N~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~v 208 (495)
T 3b4w_A 175 CTIVLKPAAETPLTANALAEVFAEVGLPEGVLSV 208 (495)
T ss_dssp CEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEE
T ss_pred CEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEE
Confidence 56788887775554 47889999999998763
No 5
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=43.62 E-value=18 Score=29.32 Aligned_cols=31 Identities=29% Similarity=0.352 Sum_probs=23.6
Q ss_pred ccEEEeccccchhh---HHHHHHhCCCCCCCcCC
Q 047759 7 GGIVKKGHEEGLKL---AVSLLKKFELPEGLLPL 37 (102)
Q Consensus 7 ~a~v~~g~~~~~~~---a~elL~~~gLP~GLLP~ 37 (102)
++.|++..+.+..+ +.++|++.|||.|.+-.
T Consensus 191 N~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~v 224 (515)
T 2d4e_A 191 NTVVLKPAEWSPFTATKLAEILKEADLPPGVFNL 224 (515)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEE
T ss_pred CeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEE
Confidence 56788888755554 47889999999998753
No 6
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=43.27 E-value=20 Score=28.62 Aligned_cols=30 Identities=20% Similarity=0.273 Sum_probs=23.0
Q ss_pred ccEEEeccccchhh----HHHHHHhCCCCCCCcC
Q 047759 7 GGIVKKGHEEGLKL----AVSLLKKFELPEGLLP 36 (102)
Q Consensus 7 ~a~v~~g~~~~~~~----a~elL~~~gLP~GLLP 36 (102)
++.|++.++.+..+ +.++|.+.|||.|++-
T Consensus 172 N~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~ 205 (485)
T 4dng_A 172 NSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLN 205 (485)
T ss_dssp CEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEE
T ss_pred CEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEE
Confidence 46778887765544 4688999999999875
No 7
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=42.54 E-value=17 Score=29.39 Aligned_cols=31 Identities=13% Similarity=0.419 Sum_probs=23.9
Q ss_pred ccEEEeccccchhh---HHHHHHhCCCCCCCcCC
Q 047759 7 GGIVKKGHEEGLKL---AVSLLKKFELPEGLLPL 37 (102)
Q Consensus 7 ~a~v~~g~~~~~~~---a~elL~~~gLP~GLLP~ 37 (102)
++.|++..+.+..+ +.++|++.|||.|.+-.
T Consensus 202 N~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~v 235 (516)
T 1uzb_A 202 NTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNF 235 (516)
T ss_dssp CEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEE
T ss_pred CeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEE
Confidence 56788888766554 46889999999998753
No 8
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=42.37 E-value=19 Score=28.98 Aligned_cols=30 Identities=27% Similarity=0.302 Sum_probs=23.1
Q ss_pred ccEEEeccccchhh---HHHHHHhCCCCCCCcC
Q 047759 7 GGIVKKGHEEGLKL---AVSLLKKFELPEGLLP 36 (102)
Q Consensus 7 ~a~v~~g~~~~~~~---a~elL~~~gLP~GLLP 36 (102)
++.|+++.+.+..+ +.++|++.|||.|.+-
T Consensus 177 N~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~ 209 (497)
T 3k2w_A 177 NTMVLKPTQETPLATTELGRIAKEAGLPDGVLN 209 (497)
T ss_dssp CEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEE
T ss_pred CEEEEECCCCChHHHHHHHHHHHHhCcCcCeEE
Confidence 56788887766554 4578999999999875
No 9
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=42.35 E-value=16 Score=29.57 Aligned_cols=31 Identities=26% Similarity=0.334 Sum_probs=23.8
Q ss_pred ccEEEeccccchhh---HHHHHHhCCCCCCCcCC
Q 047759 7 GGIVKKGHEEGLKL---AVSLLKKFELPEGLLPL 37 (102)
Q Consensus 7 ~a~v~~g~~~~~~~---a~elL~~~gLP~GLLP~ 37 (102)
++.|++..+.+..+ +.++|++.|||.|.+-.
T Consensus 188 N~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~v 221 (501)
T 1bxs_A 188 NTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNI 221 (501)
T ss_dssp CEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEE
T ss_pred CeeeccCCCccHHHHHHHHHHHHHhCCCcceEEE
Confidence 46788887776554 47889999999998753
No 10
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=42.17 E-value=16 Score=29.32 Aligned_cols=30 Identities=20% Similarity=0.207 Sum_probs=23.1
Q ss_pred ccEEEeccccchhh---HHHHHHhCCCCCCCcC
Q 047759 7 GGIVKKGHEEGLKL---AVSLLKKFELPEGLLP 36 (102)
Q Consensus 7 ~a~v~~g~~~~~~~---a~elL~~~gLP~GLLP 36 (102)
++.|++..+.+..+ +.++|++.|||.|++=
T Consensus 175 N~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~ 207 (487)
T 2w8n_A 175 CTVVVKPAEDTPFSALALAELASQAGIPSGVYN 207 (487)
T ss_dssp CEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEE
T ss_pred CEEEEECCCcchHHHHHHHHHHHHhCCCCCeEE
Confidence 56788887765554 4688999999999875
No 11
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=42.10 E-value=16 Score=29.53 Aligned_cols=31 Identities=23% Similarity=0.326 Sum_probs=23.7
Q ss_pred ccEEEeccccchhh---HHHHHHhCCCCCCCcCC
Q 047759 7 GGIVKKGHEEGLKL---AVSLLKKFELPEGLLPL 37 (102)
Q Consensus 7 ~a~v~~g~~~~~~~---a~elL~~~gLP~GLLP~ 37 (102)
++.|++..+.+..+ +.++|++.|||.|.+-.
T Consensus 187 N~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~v 220 (500)
T 1o04_A 187 NVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNI 220 (500)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEE
T ss_pred CEEEEECCccChHHHHHHHHHHHHhCCCcCeEEE
Confidence 46788888775444 57889999999998763
No 12
>3qth_A Uncharacterized protein; DINB/YFIT-like putative metalloenzymes, structural genomics, center for structural genomics, JCSG; HET: MSE; 2.20A {Colwellia psychrerythraea}
Probab=42.00 E-value=12 Score=26.90 Aligned_cols=15 Identities=7% Similarity=0.089 Sum_probs=13.9
Q ss_pred hhHHHHHHhCCCCCC
Q 047759 19 KLAVSLLKKFELPEG 33 (102)
Q Consensus 19 ~~a~elL~~~gLP~G 33 (102)
.+||.+||..|.|.|
T Consensus 144 tTAYaILR~~GV~LG 158 (176)
T 3qth_A 144 SMVYAIAKNNGVSVT 158 (176)
T ss_dssp HHHHHHHHHTTCCCC
T ss_pred HHHHHHHHhcCCCcC
Confidence 489999999999998
No 13
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=41.58 E-value=20 Score=28.98 Aligned_cols=31 Identities=16% Similarity=0.217 Sum_probs=23.6
Q ss_pred ccEEEeccccchhh---HHHHHHhCCCCCCCcCC
Q 047759 7 GGIVKKGHEEGLKL---AVSLLKKFELPEGLLPL 37 (102)
Q Consensus 7 ~a~v~~g~~~~~~~---a~elL~~~gLP~GLLP~ 37 (102)
++.|++..+.+..+ +.++|++.|||.|.+-.
T Consensus 184 N~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~v 217 (503)
T 1a4s_A 184 NAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNV 217 (503)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEE
T ss_pred CEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEE
Confidence 46788887765554 47889999999998753
No 14
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=41.14 E-value=20 Score=29.12 Aligned_cols=31 Identities=19% Similarity=0.216 Sum_probs=23.6
Q ss_pred ccEEEeccccchhh---HHHHHHhCCCCCCCcCC
Q 047759 7 GGIVKKGHEEGLKL---AVSLLKKFELPEGLLPL 37 (102)
Q Consensus 7 ~a~v~~g~~~~~~~---a~elL~~~gLP~GLLP~ 37 (102)
++.|++..+.+..+ +.++|++.|||.|.+-.
T Consensus 207 NtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~v 240 (517)
T 2o2p_A 207 NTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNI 240 (517)
T ss_dssp CEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEE
T ss_pred CEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEE
Confidence 46778887766444 57889999999998753
No 15
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=41.09 E-value=22 Score=29.32 Aligned_cols=31 Identities=13% Similarity=0.271 Sum_probs=23.4
Q ss_pred cccEEEeccccchhh---HHHHHHhCCCCCCCcC
Q 047759 6 EGGIVKKGHEEGLKL---AVSLLKKFELPEGLLP 36 (102)
Q Consensus 6 ~~a~v~~g~~~~~~~---a~elL~~~gLP~GLLP 36 (102)
-++.|++..+.+..+ +.++|++.|||.|.+=
T Consensus 227 GNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvn 260 (563)
T 4e3x_A 227 GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQ 260 (563)
T ss_dssp TCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEE
T ss_pred CCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEE
Confidence 356788887765544 4588999999999874
No 16
>2npb_A Selenoprotein W; structure, thioredoxin-like fold, oxidoreductase; NMR {Mus musculus}
Probab=39.84 E-value=31 Score=22.29 Aligned_cols=37 Identities=16% Similarity=0.152 Sum_probs=24.5
Q ss_pred hhHHHHHHhCCCCCCCcCCCCce-EEEEEc-cccEEEEEecCeEEEEEe
Q 047759 19 KLAVSLLKKFELPEGLLPLANVV-EVGYVE-STGYMWIVQQNKVEHEFK 65 (102)
Q Consensus 19 ~~a~elL~~~gLP~GLLP~~~V~-~y~l~~-~tG~f~v~l~~~c~~~f~ 65 (102)
.-+-++|.+| | +.+. +..+.+ ++|.|+|++++ +.-|+
T Consensus 21 ~laqeLl~~F-------p-~~l~V~~~l~p~~~G~FEV~vng--~lV~S 59 (96)
T 2npb_A 21 QLKEKLEHEF-------P-GCLDICGEGTPQVTGFFEVTVAG--KLVHS 59 (96)
T ss_dssp HHHHHHHHHS-------B-TTEEEEECCCSSCCSCCEEEETT--EEEEE
T ss_pred HHHHHHHHhC-------C-cceEEEEEEcCCCCcEEEEEECC--EEEEE
Confidence 3456777776 4 2355 555554 47999999988 55554
No 17
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=39.01 E-value=21 Score=28.91 Aligned_cols=31 Identities=29% Similarity=0.381 Sum_probs=23.5
Q ss_pred ccEEEeccccchhh---HHHHHHhCCCCCCCcCC
Q 047759 7 GGIVKKGHEEGLKL---AVSLLKKFELPEGLLPL 37 (102)
Q Consensus 7 ~a~v~~g~~~~~~~---a~elL~~~gLP~GLLP~ 37 (102)
++.|++..+.+..+ +.++|++.|||.|.+-.
T Consensus 176 N~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~v 209 (506)
T 3rh9_A 176 CPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNL 209 (506)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEE
T ss_pred CEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEE
Confidence 56788887766554 45788999999998753
No 18
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=38.53 E-value=21 Score=28.68 Aligned_cols=30 Identities=23% Similarity=0.236 Sum_probs=23.2
Q ss_pred ccEEEeccccchhh---HHHHHHhCCCCCCCcC
Q 047759 7 GGIVKKGHEEGLKL---AVSLLKKFELPEGLLP 36 (102)
Q Consensus 7 ~a~v~~g~~~~~~~---a~elL~~~gLP~GLLP 36 (102)
++.|++..+.+..+ +.++|++.|||.|.+-
T Consensus 152 N~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~ 184 (484)
T 3ros_A 152 NPILLKHAHNVPGSAALTAKIIKRAGAPEGSLI 184 (484)
T ss_dssp CCEEEECCTTCHHHHHHHHHHHHHHTCCTTSEE
T ss_pred CEEEEECCCCChHHHHHHHHHHHHhCcCcCeEE
Confidence 56788887765554 4578899999999875
No 19
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=37.31 E-value=21 Score=28.84 Aligned_cols=30 Identities=13% Similarity=0.237 Sum_probs=23.0
Q ss_pred ccEEEeccccchhh---HHHHHHhCCCCCCCcC
Q 047759 7 GGIVKKGHEEGLKL---AVSLLKKFELPEGLLP 36 (102)
Q Consensus 7 ~a~v~~g~~~~~~~---a~elL~~~gLP~GLLP 36 (102)
++.|++..+.+..+ +.+++++.|||.|++-
T Consensus 171 NtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~ 203 (490)
T 2wme_A 171 NAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFN 203 (490)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEE
T ss_pred CeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEE
Confidence 46788887765554 5678899999999875
No 20
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=36.76 E-value=22 Score=28.91 Aligned_cols=30 Identities=20% Similarity=0.286 Sum_probs=22.9
Q ss_pred ccEEEeccccchhh---HHHHHHhCCCCCCCcC
Q 047759 7 GGIVKKGHEEGLKL---AVSLLKKFELPEGLLP 36 (102)
Q Consensus 7 ~a~v~~g~~~~~~~---a~elL~~~gLP~GLLP 36 (102)
++.|++..+.+..+ +.++|++.|||.|++-
T Consensus 199 NtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvn 231 (520)
T 3ed6_A 199 CSLVMKPSEITPLTTIRVFELMEEVGFPKGTIN 231 (520)
T ss_dssp CEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEE
T ss_pred CEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEE
Confidence 56778887765554 4688999999999885
No 21
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=36.39 E-value=26 Score=28.20 Aligned_cols=30 Identities=27% Similarity=0.319 Sum_probs=22.7
Q ss_pred ccEEEeccccchh---hHHHHHHhCCCCCCCcC
Q 047759 7 GGIVKKGHEEGLK---LAVSLLKKFELPEGLLP 36 (102)
Q Consensus 7 ~a~v~~g~~~~~~---~a~elL~~~gLP~GLLP 36 (102)
++.|++..+.+.. -+.++|++.|||.|++-
T Consensus 190 N~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvn 222 (497)
T 3i44_A 190 CTMVLKPSEIAPLSAMLFAEILDEAALPSGVFN 222 (497)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEE
T ss_pred CEEEEECCcccHHHHHHHHHHHHHhCcCCCeEE
Confidence 4677887776544 45688999999999885
No 22
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=36.16 E-value=25 Score=28.56 Aligned_cols=31 Identities=26% Similarity=0.328 Sum_probs=23.4
Q ss_pred ccEEEeccccchh---hHHHHHHhCCCCCCCcCC
Q 047759 7 GGIVKKGHEEGLK---LAVSLLKKFELPEGLLPL 37 (102)
Q Consensus 7 ~a~v~~g~~~~~~---~a~elL~~~gLP~GLLP~ 37 (102)
++.|++..+.+.. -+.++|++.|||.|.+-.
T Consensus 179 N~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~v 212 (517)
T 3r31_A 179 NAMVFKPSENTPLGALKIAEILIEAGLPKGLFNV 212 (517)
T ss_dssp CEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEE
T ss_pred CEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEE
Confidence 5677888776554 456889999999999853
No 23
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=35.77 E-value=28 Score=28.23 Aligned_cols=30 Identities=23% Similarity=0.379 Sum_probs=23.0
Q ss_pred ccEEEeccccchhh---HHHHHHhCCCCCCCcC
Q 047759 7 GGIVKKGHEEGLKL---AVSLLKKFELPEGLLP 36 (102)
Q Consensus 7 ~a~v~~g~~~~~~~---a~elL~~~gLP~GLLP 36 (102)
++.|++..+.+..+ +.++|++.|||.|.+-
T Consensus 191 N~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~ 223 (521)
T 4e4g_A 191 NAFILKPSERDPSVPIRLAELMIEAGLPAGILN 223 (521)
T ss_dssp CEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEE
T ss_pred CEEEEECCCcchHHHHHHHHHHHHhCCCcCeEE
Confidence 56788887765554 4578899999999875
No 24
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=35.74 E-value=23 Score=28.24 Aligned_cols=30 Identities=13% Similarity=0.237 Sum_probs=22.8
Q ss_pred ccEEEeccccchhh---HHHHHHhCCCCCCCcC
Q 047759 7 GGIVKKGHEEGLKL---AVSLLKKFELPEGLLP 36 (102)
Q Consensus 7 ~a~v~~g~~~~~~~---a~elL~~~gLP~GLLP 36 (102)
++.|++..+.+..+ +.++|++.|||.|++=
T Consensus 171 N~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~ 203 (490)
T 2ve5_A 171 NAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFN 203 (490)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEE
T ss_pred CEEEEECCCcchHHHHHHHHHHHHhCcCcCeEE
Confidence 56788887765554 4578999999999874
No 25
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=35.48 E-value=24 Score=28.06 Aligned_cols=30 Identities=23% Similarity=0.345 Sum_probs=23.0
Q ss_pred ccEEEeccccchhh---HHHHHHhCCCCCCCcC
Q 047759 7 GGIVKKGHEEGLKL---AVSLLKKFELPEGLLP 36 (102)
Q Consensus 7 ~a~v~~g~~~~~~~---a~elL~~~gLP~GLLP 36 (102)
++.|++..+.+..+ +.++|++.|||.|++-
T Consensus 168 N~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~ 200 (478)
T 3ty7_A 168 SPVVLKPSEETPFAAVILAEIFDKVGVPKGVFN 200 (478)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEE
T ss_pred CeEEEECCCcchHHHHHHHHHHHHhCcCcCeEE
Confidence 56788887765544 4678899999999875
No 26
>2nzc_A Hypothetical protein; sturctural genomics, TM1266, structural genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.95A {Thermotoga maritima} SCOP: d.58.18.14
Probab=35.24 E-value=9.4 Score=24.69 Aligned_cols=17 Identities=29% Similarity=0.489 Sum_probs=14.2
Q ss_pred cCceeccceeEEEEEee
Q 047759 83 KMKIKKLRGVKAKELML 99 (102)
Q Consensus 83 ~g~i~~L~GVk~k~lf~ 99 (102)
.|+|-+|+||++|-...
T Consensus 66 ~gkLg~i~GV~vKt~~~ 82 (86)
T 2nzc_A 66 SGKLGQISGVRVKTVPL 82 (86)
T ss_dssp HHHHHTSTTEEEEEEEC
T ss_pred HHHhCCCCCEEEEEEEe
Confidence 47899999999998753
No 27
>2f9z_C Protein (chemotaxis methylation protein); bacterial chemotaxis, signal transduction, receptor deamidas aspartyl phosphatase, protein complex; 2.40A {Thermotoga maritima} SCOP: d.194.1.3
Probab=34.66 E-value=46 Score=23.39 Aligned_cols=38 Identities=21% Similarity=0.286 Sum_probs=28.9
Q ss_pred chhhHHHHHHhCCCC------CCCcCCCCceEEEEEccccEEEEEecC
Q 047759 17 GLKLAVSLLKKFELP------EGLLPLANVVEVGYVESTGYMWIVQQN 58 (102)
Q Consensus 17 ~~~~a~elL~~~gLP------~GLLP~~~V~~y~l~~~tG~f~v~l~~ 58 (102)
..+-+.++|+++|+| .|--| +.| .|+..||.+|++.-.
T Consensus 106 Nv~~a~~~L~~~gI~i~aeD~GG~~g-R~i---~f~~~tG~v~vk~~~ 149 (159)
T 2f9z_C 106 NVEAVKKHLKDFGIKLLAEDTGGNRA-RSV---EYNIETGKLLVRKVG 149 (159)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCSSC-EEE---EEETTTTEEEEECC-
T ss_pred HHHHHHHHHHHCCCcEEEEeCCCCCC-cEE---EEECCCCEEEEEEcC
Confidence 345789999999999 56666 444 468899999998643
No 28
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=34.56 E-value=31 Score=27.60 Aligned_cols=30 Identities=30% Similarity=0.304 Sum_probs=22.9
Q ss_pred ccEEEeccccchhhH---HHHHHhCCCCCCCcC
Q 047759 7 GGIVKKGHEEGLKLA---VSLLKKFELPEGLLP 36 (102)
Q Consensus 7 ~a~v~~g~~~~~~~a---~elL~~~gLP~GLLP 36 (102)
++.|++.++.+..++ .++|.+.|||.|++-
T Consensus 168 N~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~ 200 (490)
T 3ju8_A 168 NCVVFKPSELTPKVAELTLKAWIQAGLPAGVLN 200 (490)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEE
T ss_pred CeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEE
Confidence 567888877665544 578899999999975
No 29
>2oqm_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.83A {Shewanella denitrificans} SCOP: a.213.1.3
Probab=34.47 E-value=16 Score=26.70 Aligned_cols=15 Identities=20% Similarity=0.284 Sum_probs=13.7
Q ss_pred hhHHHHHHhCCCCCC
Q 047759 19 KLAVSLLKKFELPEG 33 (102)
Q Consensus 19 ~~a~elL~~~gLP~G 33 (102)
.+||.+||..|.|.|
T Consensus 163 tTAYaILR~~GV~LG 177 (192)
T 2oqm_A 163 TTAYGILRHNGVEVG 177 (192)
T ss_dssp HHHHHHHHHHTCCCC
T ss_pred HHHHHHHHhcCCCCC
Confidence 489999999999988
No 30
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=33.76 E-value=26 Score=27.90 Aligned_cols=30 Identities=23% Similarity=0.290 Sum_probs=22.6
Q ss_pred ccEEEeccccchhh---HHHHHHhCCCCCCCcC
Q 047759 7 GGIVKKGHEEGLKL---AVSLLKKFELPEGLLP 36 (102)
Q Consensus 7 ~a~v~~g~~~~~~~---a~elL~~~gLP~GLLP 36 (102)
++.|++..+.+..+ +.++|++.|||.|.+-
T Consensus 171 N~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~ 203 (479)
T 2imp_A 171 NTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFN 203 (479)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEE
T ss_pred CEEEEECCccchHHHHHHHHHHHHhCCCcCeEE
Confidence 46778877765554 4688999999999875
No 31
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=33.55 E-value=31 Score=27.89 Aligned_cols=31 Identities=26% Similarity=0.342 Sum_probs=23.3
Q ss_pred ccEEEeccccchhh---HHHHHHhCCCCCCCcCC
Q 047759 7 GGIVKKGHEEGLKL---AVSLLKKFELPEGLLPL 37 (102)
Q Consensus 7 ~a~v~~g~~~~~~~---a~elL~~~gLP~GLLP~ 37 (102)
++.|++..+.+..+ ..++|++.|||.|.+-.
T Consensus 181 N~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~v 214 (505)
T 3prl_A 181 NTVVFKPATQGSLSGIKMVEALADAGAPEGIIQV 214 (505)
T ss_dssp CEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEE
T ss_pred CEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEE
Confidence 46677887766554 45788999999998853
No 32
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=33.41 E-value=27 Score=27.99 Aligned_cols=31 Identities=26% Similarity=0.252 Sum_probs=23.0
Q ss_pred ccEEEeccccchhh---HHHHHHhCCCCCCCcCC
Q 047759 7 GGIVKKGHEEGLKL---AVSLLKKFELPEGLLPL 37 (102)
Q Consensus 7 ~a~v~~g~~~~~~~---a~elL~~~gLP~GLLP~ 37 (102)
++.|++.++.+..+ +.++|++.|||.|.+-.
T Consensus 177 N~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~v 210 (484)
T 3ifg_A 177 CPIVVKPAESTPFSALAMAFLAERAGVPKGVLSV 210 (484)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEE
T ss_pred CEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEE
Confidence 56788887765544 45778999999998753
No 33
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=33.33 E-value=27 Score=28.13 Aligned_cols=31 Identities=23% Similarity=0.238 Sum_probs=23.1
Q ss_pred ccEEEeccccchhh---HHHHHHhCCCCCCCcCC
Q 047759 7 GGIVKKGHEEGLKL---AVSLLKKFELPEGLLPL 37 (102)
Q Consensus 7 ~a~v~~g~~~~~~~---a~elL~~~gLP~GLLP~ 37 (102)
++.|++.++.+..+ +.++|++.|||.|++-.
T Consensus 180 N~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~v 213 (503)
T 3iwj_A 180 CAAILKPSELASLTCLELGEICKEVGLPPGVLNI 213 (503)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEE
T ss_pred CeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEE
Confidence 56778887765544 45788999999998853
No 34
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=33.25 E-value=32 Score=27.47 Aligned_cols=31 Identities=26% Similarity=0.355 Sum_probs=23.1
Q ss_pred ccEEEeccccchh---hHHHHHHhCCCCCCCcCC
Q 047759 7 GGIVKKGHEEGLK---LAVSLLKKFELPEGLLPL 37 (102)
Q Consensus 7 ~a~v~~g~~~~~~---~a~elL~~~gLP~GLLP~ 37 (102)
++.|++..+.+.. -+.+++++.|||.|.+-.
T Consensus 170 N~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~v 203 (486)
T 1t90_A 170 NTFILKPSERTPLLTEKLVELFEKAGLPKGVFNV 203 (486)
T ss_dssp CEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEE
T ss_pred CEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEE
Confidence 4667787776544 456889999999998753
No 35
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=32.79 E-value=34 Score=23.63 Aligned_cols=18 Identities=6% Similarity=0.027 Sum_probs=15.4
Q ss_pred eEEEEEccccEEEEEecC
Q 047759 41 VEVGYVESTGYMWIVQQN 58 (102)
Q Consensus 41 ~~y~l~~~tG~f~v~l~~ 58 (102)
..-.||.++|.|.|+|++
T Consensus 63 ~kA~YD~d~~~~~VtLpK 80 (134)
T 2k8q_A 63 STAQYDSKDECINVKVAK 80 (134)
T ss_dssp CEEEEETTTTEEEEEEEE
T ss_pred cceeEeccCCEEEEEEeC
Confidence 557789899999999986
No 36
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=32.58 E-value=33 Score=27.74 Aligned_cols=30 Identities=17% Similarity=0.174 Sum_probs=22.6
Q ss_pred ccEEEeccccchh---hHHHHHHhCCCCCCCcC
Q 047759 7 GGIVKKGHEEGLK---LAVSLLKKFELPEGLLP 36 (102)
Q Consensus 7 ~a~v~~g~~~~~~---~a~elL~~~gLP~GLLP 36 (102)
++.|++..+.+.. -+.++|++.|||.|.+-
T Consensus 197 N~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~ 229 (504)
T 3ek1_A 197 CTMIVRPADLTPLTALALGVLAEKAGIPAGVLQ 229 (504)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEE
T ss_pred CEEEEECCCcChHHHHHHHHHHHHhCCCcccEE
Confidence 4677887776544 44678899999999875
No 37
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=32.49 E-value=29 Score=27.56 Aligned_cols=31 Identities=19% Similarity=0.192 Sum_probs=23.2
Q ss_pred ccEEEeccccchhh---HHHHHHhCCCCCCCcCC
Q 047759 7 GGIVKKGHEEGLKL---AVSLLKKFELPEGLLPL 37 (102)
Q Consensus 7 ~a~v~~g~~~~~~~---a~elL~~~gLP~GLLP~ 37 (102)
++.|++..+.+..+ +.++|.+.|||.|++-.
T Consensus 172 N~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~v 205 (475)
T 1euh_A 172 NVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNT 205 (475)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEE
T ss_pred CEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEE
Confidence 56778887766554 46788999999998753
No 38
>2p0g_A Selenoprotein W-related protein; VCR75, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Vibrio cholerae}
Probab=32.07 E-value=69 Score=21.08 Aligned_cols=35 Identities=20% Similarity=0.249 Sum_probs=23.5
Q ss_pred hHHHHHHhCCCCCCCcCCCCceEEEEEc-cccEEEEEecCeEEEEE
Q 047759 20 LAVSLLKKFELPEGLLPLANVVEVGYVE-STGYMWIVQQNKVEHEF 64 (102)
Q Consensus 20 ~a~elL~~~gLP~GLLP~~~V~~y~l~~-~tG~f~v~l~~~c~~~f 64 (102)
-+.++|.+|+ +.+.+.++.+ .+|.|+|++++ +.-|
T Consensus 23 laqeLl~tF~--------~~l~~v~l~P~~~G~FEV~vng--~lV~ 58 (105)
T 2p0g_A 23 LSQELLHTFS--------EEIEYVALHPDTGGRFEIFCNG--VQIW 58 (105)
T ss_dssp HHHHHHHHTT--------TTEEEEEEEEESTTCEEEEETT--EEEE
T ss_pred HHHHHHHHcC--------cccceEEEEeCCCceEEEEECC--EEEE
Confidence 4567777764 2344566655 57899999998 5555
No 39
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=31.46 E-value=30 Score=27.58 Aligned_cols=30 Identities=17% Similarity=0.145 Sum_probs=22.6
Q ss_pred ccEEEeccccchhh---HHHHHHhCCCCCCCcC
Q 047759 7 GGIVKKGHEEGLKL---AVSLLKKFELPEGLLP 36 (102)
Q Consensus 7 ~a~v~~g~~~~~~~---a~elL~~~gLP~GLLP 36 (102)
++.|++.++.+..+ ..++|++.|||.|++-
T Consensus 174 N~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~ 206 (481)
T 3jz4_A 174 CTMVLKPASQTPFSALALAELAIRAGVPAGVFN 206 (481)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEE
T ss_pred CEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEE
Confidence 56778887765544 4678899999999874
No 40
>3p7j_A Heterochromatin protein 1; chromo shadow domain, gene silenc epigenetics, transcription; 2.30A {Drosophila melanogaster}
Probab=31.18 E-value=32 Score=22.11 Aligned_cols=29 Identities=10% Similarity=0.147 Sum_probs=19.8
Q ss_pred HHhCCCCCCCcCCCCceEEEEEccccEEEEEe
Q 047759 25 LKKFELPEGLLPLANVVEVGYVESTGYMWIVQ 56 (102)
Q Consensus 25 L~~~gLP~GLLP~~~V~~y~l~~~tG~f~v~l 56 (102)
=+.+||.+||=| +.|.+.. + .+|.+...+
T Consensus 17 ~k~~GF~RGle~-EkIlgat-~-~~Gel~fLV 45 (87)
T 3p7j_A 17 SGSTGFDRGLEA-EKILGAS-D-NNGRLTFLI 45 (87)
T ss_dssp ---CTTTTTCCE-EEEEEEE-E-ETTEEEEEE
T ss_pred CCCCCccCCCCc-eEEeeEE-c-cCCcEEEEE
Confidence 356899999999 6888775 3 478765543
No 41
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=31.02 E-value=38 Score=26.73 Aligned_cols=30 Identities=17% Similarity=0.225 Sum_probs=21.4
Q ss_pred ccEEEeccccchhhHH---HH----HHhCCCCCCCcC
Q 047759 7 GGIVKKGHEEGLKLAV---SL----LKKFELPEGLLP 36 (102)
Q Consensus 7 ~a~v~~g~~~~~~~a~---el----L~~~gLP~GLLP 36 (102)
++.|++.++.+..++. ++ |.+.|||.|++-
T Consensus 132 N~VVlKps~~tp~~~~~~~~~~~~a~~~aG~P~gvv~ 168 (452)
T 3my7_A 132 NGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIG 168 (452)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEE
T ss_pred CeEEEEcCCCchHHHHHHHHHHHHHHHHcCCCcCcEE
Confidence 5678888887655543 33 458999999885
No 42
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=31.02 E-value=38 Score=27.61 Aligned_cols=31 Identities=23% Similarity=0.325 Sum_probs=23.2
Q ss_pred ccEEEeccccchhh---HHHHHHhCCCCCCCcCC
Q 047759 7 GGIVKKGHEEGLKL---AVSLLKKFELPEGLLPL 37 (102)
Q Consensus 7 ~a~v~~g~~~~~~~---a~elL~~~gLP~GLLP~ 37 (102)
++.|++..+.+..+ +.++|++.|||.|.+-.
T Consensus 201 N~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~v 234 (538)
T 3qan_A 201 NTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINY 234 (538)
T ss_dssp CEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEE
T ss_pred CEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEE
Confidence 46788887765544 45788999999998853
No 43
>2oka_A Hypothetical protein; PAR82, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.50A {Pseudomonas aeruginosa} PDB: 2obk_A
Probab=30.84 E-value=67 Score=21.10 Aligned_cols=35 Identities=23% Similarity=0.294 Sum_probs=23.0
Q ss_pred hHHHHHHhCCCCCCCcCCCCceEEEEEc-cccEEEEEecCeEEEEE
Q 047759 20 LAVSLLKKFELPEGLLPLANVVEVGYVE-STGYMWIVQQNKVEHEF 64 (102)
Q Consensus 20 ~a~elL~~~gLP~GLLP~~~V~~y~l~~-~tG~f~v~l~~~c~~~f 64 (102)
-+.++|.+|+ +.+.+.++.+ .+|.|+|++++ +.-|
T Consensus 25 laqeLl~tF~--------~~l~~v~l~P~~~G~FEV~vng--~lV~ 60 (104)
T 2oka_A 25 LAQELLSTFA--------DDLGKVCLEPGTGGVFRITCDG--VQVW 60 (104)
T ss_dssp HHHHHHHHST--------TTCSEEEEEEECTTCEEEEETT--EEEE
T ss_pred HHHHHHHHcC--------cccceEEEEeCCCceEEEEECC--EEEE
Confidence 4667777764 2233455554 57999999998 5555
No 44
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=29.94 E-value=33 Score=27.93 Aligned_cols=30 Identities=20% Similarity=0.247 Sum_probs=22.9
Q ss_pred ccEEEeccccchhh---HHHHHHhCCCCCCCcC
Q 047759 7 GGIVKKGHEEGLKL---AVSLLKKFELPEGLLP 36 (102)
Q Consensus 7 ~a~v~~g~~~~~~~---a~elL~~~gLP~GLLP 36 (102)
++.|++..+.+..+ +.++|++.|||.|.+-
T Consensus 190 N~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~ 222 (528)
T 3u4j_A 190 CTVVLKPSEFTSGTSIRLAELAREAGIPDGVFN 222 (528)
T ss_dssp CEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEE
T ss_pred CeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEE
Confidence 56788887765554 4678899999999874
No 45
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=29.60 E-value=40 Score=27.12 Aligned_cols=31 Identities=23% Similarity=0.186 Sum_probs=23.1
Q ss_pred ccEEEeccccchhh---HHHHHHhCCCCCCCcCC
Q 047759 7 GGIVKKGHEEGLKL---AVSLLKKFELPEGLLPL 37 (102)
Q Consensus 7 ~a~v~~g~~~~~~~---a~elL~~~gLP~GLLP~ 37 (102)
++.|++..+.+..+ +.++|++.|||.|.+-.
T Consensus 186 N~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~v 219 (501)
T 1uxt_A 186 NAVVVKPSISDPLPAAMAVKALLDAGFPPDAIAL 219 (501)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEE
T ss_pred CEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEE
Confidence 46778877765554 56889999999998753
No 46
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=29.03 E-value=40 Score=26.57 Aligned_cols=30 Identities=13% Similarity=0.169 Sum_probs=22.4
Q ss_pred ccEEEeccccchh---hHHHHHHhCCCCCCCcC
Q 047759 7 GGIVKKGHEEGLK---LAVSLLKKFELPEGLLP 36 (102)
Q Consensus 7 ~a~v~~g~~~~~~---~a~elL~~~gLP~GLLP 36 (102)
++.|++.++.+.. -+.++|++.|||.|.+-
T Consensus 155 N~VvlKps~~tp~~~~~l~~~l~~aglP~gv~~ 187 (462)
T 3etf_A 155 NSYLLKHAPNVTGCAQMIARILAEAGTPAGVYG 187 (462)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHTTCCBTTEE
T ss_pred CEEEEECCCCCcHHHHHHHHHHHHhCCCcCeEE
Confidence 5677888776554 45577889999999875
No 47
>3hg9_A PILM; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, P protein, unknown function; 2.40A {Pseudomonas aeruginosa}
Probab=28.90 E-value=54 Score=22.47 Aligned_cols=61 Identities=8% Similarity=-0.013 Sum_probs=40.8
Q ss_pred HhCCCCCCCcCCCCceEEEEEccccEEEEEecCeEEEEEeecCeEEEEceEEEEEEecCceeccce
Q 047759 26 KKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEHEFKMISKLVSYDTEINGYVDKMKIKKLRG 91 (102)
Q Consensus 26 ~~~gLP~GLLP~~~V~~y~l~~~tG~f~v~l~~~c~~~f~~~~~~v~Y~~~ItG~l~~g~i~~L~G 91 (102)
.+.|||.+..|..+++.|- +.|..||++..++.--+... ...+=++ .-|..+.|+|-.-+|
T Consensus 43 a~L~lP~wy~~~~~i~~~I---~~Gr~yV~~~~~~pgL~aaL-~~~t~~S-l~G~~~~G~Lv~p~g 103 (131)
T 3hg9_A 43 SALGLPAWFRKPVRLQGYI---AAGTSYAFIASPPAGLAAAV-DTGTESD-LVGVRRNGQLVTRRL 103 (131)
T ss_dssp TTTTCCSSCCCCTTEEEEE---SSSCEEEEESSCCTTHHHHH-HHHCCCE-EEEEESSSSEEETTT
T ss_pred HHcCCCcccCCCCCeeEEE---ECCEEEEEecCCCchHHHHH-HHhcCcc-eeEEeeCCEEECCCC
Confidence 4678999998877999983 45999999854222111000 1123445 789999999987776
No 48
>2r41_A Uncharacterized protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics; 2.90A {Enterococcus faecalis}
Probab=28.87 E-value=1.3e+02 Score=20.09 Aligned_cols=37 Identities=11% Similarity=0.245 Sum_probs=30.5
Q ss_pred hhHHHHHHhCCCCCCCcCCCCceEEEEEccccEEEEEec
Q 047759 19 KLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQ 57 (102)
Q Consensus 19 ~~a~elL~~~gLP~GLLP~~~V~~y~l~~~tG~f~v~l~ 57 (102)
.+.-.++..+ =+|.+|++++.-|.+-...|.+.+...
T Consensus 30 d~~W~IID~~--lKgv~~Ld~ll~F~L~nn~~~lti~~s 66 (110)
T 2r41_A 30 DSIWLIIDLN--LKGVIPLNDLLHFDLLNNNGKVTVHFS 66 (110)
T ss_dssp HHHHHHHHHH--TBTTBCCCSEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHH--hcCCccccceEEEEEEecCCcEEEEEe
Confidence 4566677777 689999999999999888899888764
No 49
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=28.27 E-value=48 Score=22.47 Aligned_cols=31 Identities=10% Similarity=0.180 Sum_probs=21.9
Q ss_pred hCCCCCCCcCCCCceEEEEEccccEEEEEecC
Q 047759 27 KFELPEGLLPLANVVEVGYVESTGYMWIVQQN 58 (102)
Q Consensus 27 ~~gLP~GLLP~~~V~~y~l~~~tG~f~v~l~~ 58 (102)
+..||.-+.=- +=..-+||.++|.|.|++++
T Consensus 64 RL~lP~~vved-~~~~A~YD~d~g~~~v~lpK 94 (115)
T 3eud_A 64 RLRFPHELIDD-ERSTAQYDSKDECINVKVAK 94 (115)
T ss_dssp EEECSSCEECS-TTCEEEEETTTTEEEEEEEE
T ss_pred EEecCcceecC-CCcceEEeCCCcEEEEEEcC
Confidence 34566666642 33556788889999999986
No 50
>4h3u_A Hypothetical protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.15A {Catenulispora acidiphila}
Probab=28.05 E-value=26 Score=22.79 Aligned_cols=18 Identities=28% Similarity=0.305 Sum_probs=15.0
Q ss_pred hHHHHHHhCCCCCCCcCC
Q 047759 20 LAVSLLKKFELPEGLLPL 37 (102)
Q Consensus 20 ~a~elL~~~gLP~GLLP~ 37 (102)
...++|++.|||....|.
T Consensus 139 D~~~ll~QlGlp~~w~pa 156 (158)
T 4h3u_A 139 SLSSVLAQSGLPADWTPS 156 (158)
T ss_dssp CHHHHHHHHTCCTTCCC-
T ss_pred CHHHHHHHcCCCCCCCCC
Confidence 456899999999999996
No 51
>2e2s_A Agelenin; cystine knot, presynaptic calcium channel inhibitor, toxin; NMR {Allagelena opulenta}
Probab=27.27 E-value=20 Score=19.68 Aligned_cols=13 Identities=46% Similarity=0.925 Sum_probs=10.8
Q ss_pred cceeEEEEEeecC
Q 047759 89 LRGVKAKELMLWP 101 (102)
Q Consensus 89 L~GVk~k~lf~W~ 101 (102)
-+|++.|+|-+|-
T Consensus 19 Csgl~CKeL~iW~ 31 (36)
T 2e2s_A 19 CSGLKCKELSIWD 31 (36)
T ss_dssp CTTCCEEEEETTE
T ss_pred cCCCceeeeeeeh
Confidence 4789999999994
No 52
>3dex_A SAV_2001; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Streptomyces avermitilis} SCOP: c.47.1.0
Probab=26.88 E-value=98 Score=20.54 Aligned_cols=32 Identities=25% Similarity=0.366 Sum_probs=23.1
Q ss_pred hhHHHHHHhCCCCCCCcCCCCceEEEEEc-cccEEEEEecC
Q 047759 19 KLAVSLLKKFELPEGLLPLANVVEVGYVE-STGYMWIVQQN 58 (102)
Q Consensus 19 ~~a~elL~~~gLP~GLLP~~~V~~y~l~~-~tG~f~v~l~~ 58 (102)
.-+.|||.+++ +.+.+.++.+ .+|.|+|.+++
T Consensus 31 ~laqeLl~tF~--------~~l~eVsL~Pg~gG~FeV~vdg 63 (107)
T 3dex_A 31 WLAQELLTTFE--------TELTELALKPGTGGVFVVRVDD 63 (107)
T ss_dssp HHHHHHHHHST--------TTEEEEEEEEESSSCEEEEETT
T ss_pred HHHHHHHHhcc--------cccceEEEEeCCCceEEEEECC
Confidence 35778888873 3556666665 56889999988
No 53
>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein; 1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A
Probab=26.32 E-value=33 Score=21.29 Aligned_cols=26 Identities=19% Similarity=0.215 Sum_probs=21.0
Q ss_pred EEeccccchhhHHHHHHhCCCCCCCcC
Q 047759 10 VKKGHEEGLKLAVSLLKKFELPEGLLP 36 (102)
Q Consensus 10 v~~g~~~~~~~a~elL~~~gLP~GLLP 36 (102)
-|+| ..++..|-++|.+.|.|.|-+=
T Consensus 7 Wyhg-~isR~~Ae~lL~~~g~~~G~FL 32 (105)
T 1nrv_A 7 WFHG-RISREESHRIIKQQGLVDGLFL 32 (105)
T ss_dssp TBCT-TCCHHHHHHHHHHTTCCTTEEE
T ss_pred ccCC-CCCHHHHHHHHHhcCCCCceEE
Confidence 4677 4588999999999998888663
No 54
>1ulr_A Putative acylphosphatase; hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: d.58.10.1
Probab=25.68 E-value=57 Score=20.18 Aligned_cols=21 Identities=10% Similarity=0.041 Sum_probs=18.1
Q ss_pred CceEEEEEccccEEEEEecCe
Q 047759 39 NVVEVGYVESTGYMWIVQQNK 59 (102)
Q Consensus 39 ~V~~y~l~~~tG~f~v~l~~~ 59 (102)
++++|-.|.++|.+++.+.++
T Consensus 29 gl~G~V~N~~dG~Vei~~eG~ 49 (88)
T 1ulr_A 29 GLSGYAENLPDGRVEVVAEGP 49 (88)
T ss_dssp TCEEEEEECTTSCEEEEEESC
T ss_pred CCeEEEEECCCCcEEEEEEeC
Confidence 678999999999999988763
No 55
>2f68_X Collagen adhesin; beta barrel, domain SWAP, cell adhesion; 1.95A {Staphylococcus aureus} PDB: 2f6a_A 1amx_A
Probab=23.85 E-value=75 Score=24.14 Aligned_cols=34 Identities=12% Similarity=0.086 Sum_probs=23.0
Q ss_pred EEEEEccccEEEEEecCeEEEEEeecCeEEEEceEEE
Q 047759 42 EVGYVESTGYMWIVQQNKVEHEFKMISKLVSYDTEIN 78 (102)
Q Consensus 42 ~y~l~~~tG~f~v~l~~~c~~~f~~~~~~v~Y~~~It 78 (102)
.|++|.+.+.|.|.++.. ... ...|.++|.++|+
T Consensus 230 ~it~d~~~~~f~i~~~~~-~~~--~~~y~I~Y~T~i~ 263 (313)
T 2f68_X 230 KITVDNTKNTIDVTIPQG-YGS--YNSFSINYKTKIT 263 (313)
T ss_dssp EEEEETTTTEEEEEECHH-HHT--TEEEEEEEEEEES
T ss_pred EEEEecCCCeEEEEeCCC-CCC--ccEEEEEEEEEec
Confidence 478887788999998631 000 0147888888887
No 56
>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6 (PTK6/BRK), SRC homology 2(S domain, solution structure, backbone dynamics, transferase; NMR {Homo sapiens} SCOP: d.93.1.1
Probab=22.88 E-value=39 Score=20.82 Aligned_cols=25 Identities=20% Similarity=-0.052 Sum_probs=20.6
Q ss_pred EeccccchhhHHHHHHhCCCCCCCcC
Q 047759 11 KKGHEEGLKLAVSLLKKFELPEGLLP 36 (102)
Q Consensus 11 ~~g~~~~~~~a~elL~~~gLP~GLLP 36 (102)
|+| ..++..|-++|...|-|.|-+=
T Consensus 5 yhg-~isR~~Ae~lL~~~g~~~G~FL 29 (100)
T 1rja_A 5 FFG-CISRSEAVRRLQAEGNATGAFL 29 (100)
T ss_dssp BCT-TCCHHHHHHHHSSTTCSSCCEE
T ss_pred ccC-CCCHHHHHHHHhccCCCCCEEE
Confidence 567 4588999999999998888763
No 57
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=22.45 E-value=50 Score=20.04 Aligned_cols=33 Identities=21% Similarity=0.408 Sum_probs=24.5
Q ss_pred HHHhCCCCCCCcCCCCceEEEEEccccEEEEEecCe
Q 047759 24 LLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNK 59 (102)
Q Consensus 24 lL~~~gLP~GLLP~~~V~~y~l~~~tG~f~v~l~~~ 59 (102)
.-+++-||.+.=| +.|+. .|. ++|-+.|.++++
T Consensus 52 F~R~~~LP~~vd~-~~i~A-~~~-~~GvL~I~lPK~ 84 (85)
T 3q9p_A 52 FTRKYTLPPGVDP-TQVSS-SLS-PEGTLTVEAPMP 84 (85)
T ss_dssp EEEEEECCTTCCG-GGCEE-EEC-TTSEEEEEEECC
T ss_pred EEEEEECCCCcCh-HHcEE-EEC-CCCEEEEEEEcC
Confidence 4567789999888 46754 463 479999999874
No 58
>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine, tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A
Probab=22.27 E-value=44 Score=21.07 Aligned_cols=26 Identities=19% Similarity=0.181 Sum_probs=21.2
Q ss_pred EEeccccchhhHHHHHHhCCCCCCCcC
Q 047759 10 VKKGHEEGLKLAVSLLKKFELPEGLLP 36 (102)
Q Consensus 10 v~~g~~~~~~~a~elL~~~gLP~GLLP 36 (102)
-|+| ...+..|-++|.+.|-|.|-+=
T Consensus 16 Wyhg-~isR~~Ae~lL~~~g~~~G~FL 41 (117)
T 3pqz_A 16 WFHG-RISREESQRLIGQQGLVDGLFL 41 (117)
T ss_dssp TBCC-SCCHHHHHHHHHHTTCCTTEEE
T ss_pred cccC-CCCHHHHHHHHhcCCCCCCEEE
Confidence 4677 4588999999999998888763
No 59
>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction, peptide complex, complex (proto-oncogene/early protein); HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F*
Probab=22.22 E-value=43 Score=20.71 Aligned_cols=26 Identities=31% Similarity=0.226 Sum_probs=21.3
Q ss_pred EEeccccchhhHHHHHHhCCCCCCCcC
Q 047759 10 VKKGHEEGLKLAVSLLKKFELPEGLLP 36 (102)
Q Consensus 10 v~~g~~~~~~~a~elL~~~gLP~GLLP 36 (102)
-|+| ...+..|-++|.+.|-|.|-+=
T Consensus 7 Wyhg-~isR~~Ae~lL~~~g~~~G~FL 32 (106)
T 1aot_F 7 WYFG-KLGRKDAERQLLSFGNPRGTFL 32 (106)
T ss_dssp SCCB-SCCHHHHHHHHHTTTCCTTEEC
T ss_pred cCCC-CCCHHHHHHHHhhCCCCCcEEE
Confidence 4677 4588999999999999988764
No 60
>2fhm_A Probable acylphosphatase; hydrolase; NMR {Bacillus subtilis} PDB: 2hlt_A 2hlu_A 3br8_A
Probab=22.04 E-value=61 Score=20.12 Aligned_cols=20 Identities=10% Similarity=0.043 Sum_probs=17.5
Q ss_pred CceEEEEEccccEEEEEecC
Q 047759 39 NVVEVGYVESTGYMWIVQQN 58 (102)
Q Consensus 39 ~V~~y~l~~~tG~f~v~l~~ 58 (102)
++++|-.|.++|.+++.+.+
T Consensus 29 gl~G~V~N~~dG~Vei~~eG 48 (91)
T 2fhm_A 29 KLAGWVKNRDDGRVEILAEG 48 (91)
T ss_dssp TCEEEEEECTTSCEEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEEe
Confidence 67899999999999998876
No 61
>3kf6_B Protein TEN1; OB fold, chromosomal protein, DNA-binding, nucleus, telomere; 1.65A {Schizosaccharomyces pombe} PDB: 3k0x_A
Probab=21.65 E-value=77 Score=21.20 Aligned_cols=49 Identities=10% Similarity=0.144 Sum_probs=29.8
Q ss_pred ceEEEEEccccEEEEEecCeEEEEEeec---CeE-EEEc--eEEEEEEecCceeccceeEEEEEeec
Q 047759 40 VVEVGYVESTGYMWIVQQNKVEHEFKMI---SKL-VSYD--TEINGYVDKMKIKKLRGVKAKELMLW 100 (102)
Q Consensus 40 V~~y~l~~~tG~f~v~l~~~c~~~f~~~---~~~-v~Y~--~~ItG~l~~g~i~~L~GVk~k~lf~W 100 (102)
|++|. ||.+.+. ..+-.+.-++. +.. ++-. -+|-|++..+ +.++.+++|
T Consensus 30 V~sY~----tg~L~Le-~~~~~v~VDV~lvL~~l~~~vGeWvNVvGYir~~-------v~VqAl~lw 84 (105)
T 3kf6_B 30 VQSYK----NGILRLI-DGSSSVTCDVTVVLPDVSIQKHEWLNIVGRKRQD-------GIVDVLLIR 84 (105)
T ss_dssp EEEEE----TTEEEEE-ETTEEEEEECTTSCCSSCCCTTCEEEEEEEEEET-------TEEEEEEEE
T ss_pred eeeec----cEEEEEc-cCCcEEEEEHHHhhchheeecccEEEEEEEEecC-------cEEEEEEEe
Confidence 77885 8999988 33223333331 111 1100 2577888874 999999999
No 62
>2fa8_A Hypothetical protein ATU0228; ALPH-beta structure, 4 helix bundle, structural genomics, PS protein structure initiative; 1.90A {Agrobacterium tumefaciens str} SCOP: c.47.1.23
Probab=21.45 E-value=83 Score=20.62 Aligned_cols=35 Identities=20% Similarity=0.374 Sum_probs=21.9
Q ss_pred hHHHHHHhCCCCCCCcCCCCceEEEEEc-cccEEEEEecCeEEEEE
Q 047759 20 LAVSLLKKFELPEGLLPLANVVEVGYVE-STGYMWIVQQNKVEHEF 64 (102)
Q Consensus 20 ~a~elL~~~gLP~GLLP~~~V~~y~l~~-~tG~f~v~l~~~c~~~f 64 (102)
-+.++|.+|. +.+.+.++.+ .+|.|+|++++ +.-|
T Consensus 27 laqeLl~tF~--------~~l~~V~l~P~~~G~FEV~vng--~lV~ 62 (105)
T 2fa8_A 27 MAQEILQTFA--------SDIGEVSLIPSTGGLFEITVDG--TIIW 62 (105)
T ss_dssp HHHHHHHHHG--------GGCSEEEEEEECTTCEEEEETT--EEEE
T ss_pred HHHHHHHHcC--------cccceEEEEcCCCcEEEEEECC--EEEE
Confidence 4557777763 1233445544 57999999988 5554
No 63
>2bjd_A Acylphosphatase; hyperthermophIle, hydrolase; 1.27A {Sulfolobus solfataricus} PDB: 2bje_A 1y9o_A
Probab=21.40 E-value=67 Score=20.52 Aligned_cols=20 Identities=10% Similarity=0.071 Sum_probs=17.6
Q ss_pred CceEEEEEccccEEEEEecC
Q 047759 39 NVVEVGYVESTGYMWIVQQN 58 (102)
Q Consensus 39 ~V~~y~l~~~tG~f~v~l~~ 58 (102)
++++|-.|.++|.+++.+.+
T Consensus 41 gL~G~V~N~~dG~Vei~~eG 60 (101)
T 2bjd_A 41 GIKGYAKNLPDGSVEVVAEG 60 (101)
T ss_dssp TCEEEEEECTTSCEEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEEe
Confidence 67899999999999998876
No 64
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=21.20 E-value=71 Score=28.49 Aligned_cols=30 Identities=27% Similarity=0.293 Sum_probs=23.0
Q ss_pred ccEEEeccccchh---hHHHHHHhCCCCCCCcC
Q 047759 7 GGIVKKGHEEGLK---LAVSLLKKFELPEGLLP 36 (102)
Q Consensus 7 ~a~v~~g~~~~~~---~a~elL~~~gLP~GLLP 36 (102)
++.|++..+.+.. .+.++|++.|||.|.+-
T Consensus 695 NtVVlKPse~tplsa~~l~ell~eAGlP~gvvn 727 (1026)
T 4f9i_A 695 NCVVFKPSGITSIIGWHLVELFREAGLPEGVFN 727 (1026)
T ss_dssp CEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEE
T ss_pred CEEEEEcCccchHHHHHHHHHHHHhCcCCCeEE
Confidence 5678888776554 45688999999999875
No 65
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=20.82 E-value=58 Score=26.09 Aligned_cols=31 Identities=23% Similarity=0.307 Sum_probs=21.6
Q ss_pred ccEEEeccccchhhHH---HH----HHhCCCCCCCcCC
Q 047759 7 GGIVKKGHEEGLKLAV---SL----LKKFELPEGLLPL 37 (102)
Q Consensus 7 ~a~v~~g~~~~~~~a~---el----L~~~gLP~GLLP~ 37 (102)
++.|++..+.+..++. ++ |++.|||.|.+-.
T Consensus 186 N~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~v 223 (500)
T 2j6l_A 186 NVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSL 223 (500)
T ss_dssp CEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred CEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEE
Confidence 5678888887766553 33 4567999988753
No 66
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=20.72 E-value=60 Score=25.57 Aligned_cols=31 Identities=19% Similarity=0.393 Sum_probs=22.0
Q ss_pred ccEEEeccccchhhHH---HHH----HhCCCCCCCcCC
Q 047759 7 GGIVKKGHEEGLKLAV---SLL----KKFELPEGLLPL 37 (102)
Q Consensus 7 ~a~v~~g~~~~~~~a~---elL----~~~gLP~GLLP~ 37 (102)
++.|++..+.+..++. +++ ++.|||.|++-.
T Consensus 164 N~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~v 201 (444)
T 4ghk_A 164 NATILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQV 201 (444)
T ss_dssp CEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred CEEEEECCccchHHHHHHHHHHHHHHHHcCCCcccEEE
Confidence 5678888877665543 443 789999998853
No 67
>2odb_B Serine/threonine-protein kinase PAK 6; small GTPase, CRIB, protein-protein complex, structu genomics, structural genomics consortium, SGC; HET: GCP; 2.40A {Homo sapiens}
Probab=20.49 E-value=77 Score=16.56 Aligned_cols=14 Identities=14% Similarity=0.178 Sum_probs=10.8
Q ss_pred ceEEEEEccccEEE
Q 047759 40 VVEVGYVESTGYMW 53 (102)
Q Consensus 40 V~~y~l~~~tG~f~ 53 (102)
+..-++|+.||+|.
T Consensus 11 ~~Hvg~d~~tG~f~ 24 (35)
T 2odb_B 11 RVHTSFDPKEGKFV 24 (35)
T ss_dssp EEEEEEETTTTEEE
T ss_pred eeeeeECCCCCccc
Confidence 45678999999863
No 68
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=20.17 E-value=71 Score=25.78 Aligned_cols=30 Identities=23% Similarity=0.202 Sum_probs=22.3
Q ss_pred ccEEEeccccchhhH---HHHHHhCC-CCCCCcC
Q 047759 7 GGIVKKGHEEGLKLA---VSLLKKFE-LPEGLLP 36 (102)
Q Consensus 7 ~a~v~~g~~~~~~~a---~elL~~~g-LP~GLLP 36 (102)
++.|++..+.+..++ .+++.+.| ||.|.+-
T Consensus 180 N~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~ 213 (534)
T 2y53_A 180 VPVIVKPATATAWLTQRMVADVVDAGILPPGALS 213 (534)
T ss_dssp CCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEE
T ss_pred CEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEE
Confidence 467888877665544 67888888 7988765
No 69
>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2 domain, signaling protein; 2.30A {Homo sapiens}
Probab=20.17 E-value=62 Score=21.13 Aligned_cols=27 Identities=15% Similarity=0.022 Sum_probs=21.7
Q ss_pred EEEeccccchhhHHHHHHhCCCCCCCcC
Q 047759 9 IVKKGHEEGLKLAVSLLKKFELPEGLLP 36 (102)
Q Consensus 9 ~v~~g~~~~~~~a~elL~~~gLP~GLLP 36 (102)
.-|+| ...+..|-++|.+.|-|.|-|=
T Consensus 27 ~WyhG-~isR~eAe~lL~~~g~~~G~FL 53 (126)
T 2aug_A 27 PWFHH-KISRDEAQRLIIQQGLVDGVFL 53 (126)
T ss_dssp TTEET-TCCHHHHHHHHHTTTCCTTEEE
T ss_pred CcccC-CCCHHHHHHHHhccCCCCCEEE
Confidence 44777 4589999999999998888763
No 70
>2vh7_A Acylphosphatase-1; hydrolase, acetylation; 1.45A {Homo sapiens} PDB: 2w4c_A 2w4p_A 2k7k_A 2k7j_A 2acy_A
Probab=20.01 E-value=76 Score=20.03 Aligned_cols=20 Identities=15% Similarity=-0.092 Sum_probs=17.5
Q ss_pred CceEEEEEccccEEEEEecC
Q 047759 39 NVVEVGYVESTGYMWIVQQN 58 (102)
Q Consensus 39 ~V~~y~l~~~tG~f~v~l~~ 58 (102)
++++|--|.++|.+++...+
T Consensus 35 gL~G~V~N~~dG~Vei~~eG 54 (99)
T 2vh7_A 35 GLVGWVQNTDRGTVQGQLQG 54 (99)
T ss_dssp TCEEEEEECTTSCEEEEEEE
T ss_pred CCcEEEEECCCCCEEEEEEc
Confidence 67899999999999988876
Done!