BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047766
(118 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Q2L|A Chain A, Crystal Structure Of Superoxide Dismutase From P.
Atrosanguina
pdb|2Q2L|B Chain B, Crystal Structure Of Superoxide Dismutase From P.
Atrosanguina
Length = 152
Score = 93.6 bits (231), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 70/125 (56%), Gaps = 17/125 (13%)
Query: 9 IAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAGSH 68
+AV++ EG G+I F+Q+GD GPT + G FHVHA GDT + C S G H
Sbjct: 5 VAVLSSSEG-VAGTILFTQEGD-GPTTVTGNISGLKPGLHGFHVHALGDTTNGCMSTGPH 62
Query: 69 FDPHNMSHGGKEDEHRHVGDLGNL-FGD--------------VYGPDSIIGRAIVIHKDQ 113
F+P HG EDE RH GDLGN+ GD + GP SIIGRA+V+H D
Sbjct: 63 FNPAGKEHGSPEDETRHAGDLGNITVGDDGTACFTIVDKQIPLTGPHSIIGRAVVVHADP 122
Query: 114 DDFGR 118
DD G+
Sbjct: 123 DDLGK 127
>pdb|1TO4|A Chain A, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO4|B Chain B, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO4|C Chain C, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO4|D Chain D, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|A Chain A, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|B Chain B, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|C Chain C, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|D Chain D, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
Length = 156
Score = 88.6 bits (218), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 71/130 (54%), Gaps = 16/130 (12%)
Query: 4 NKVNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECN 63
+ + A+ V+TG G KG + F+Q+ D+GP ++ FHVH GDT + C
Sbjct: 2 SNMKAVCVMTGT-AGVKGVVKFTQETDNGPVHVHAEFSGLKAGKHGFHVHEFGDTTNGCT 60
Query: 64 SAGSHFDPHNMSHGGKEDEHRHVGDLGNLFG---------------DVYGPDSIIGRAIV 108
SAG+HF+P HG ED RHVGDLGN+ + G SIIGR++V
Sbjct: 61 SAGAHFNPTKQEHGAPEDSIRHVGDLGNVVAGADGNAVYNATDKLISLNGSHSIIGRSMV 120
Query: 109 IHKDQDDFGR 118
IH+++DD GR
Sbjct: 121 IHENEDDLGR 130
>pdb|3GTT|A Chain A, Mouse Sod1
pdb|3GTT|B Chain B, Mouse Sod1
pdb|3GTT|C Chain C, Mouse Sod1
pdb|3GTT|D Chain D, Mouse Sod1
pdb|3GTT|E Chain E, Mouse Sod1
pdb|3GTT|F Chain F, Mouse Sod1
Length = 153
Score = 88.6 bits (218), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 66/128 (51%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
+ A+ V+ G +G +G+I F Q P +L+G FHVH GD C SA
Sbjct: 2 MKAVCVLKG-DGPVQGTIHFEQKASGEPVVLSGQITGLTEGQHGFHVHQYGDNTQGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFG---------------DVYGPDSIIGRAIVIH 110
G HF+PH+ HGG DE RHVGDLGN+ + G SIIGR +V+H
Sbjct: 61 GPHFNPHSKKHGGPADEERHVGDLGNVTAGKDGVANVSIEDRVISLSGEHSIIGRTMVVH 120
Query: 111 KDQDDFGR 118
+ QDD G+
Sbjct: 121 EKQDDLGK 128
>pdb|3LTV|A Chain A, Mouse-Human Sod1 Chimera
pdb|3LTV|B Chain B, Mouse-Human Sod1 Chimera
pdb|3LTV|C Chain C, Mouse-Human Sod1 Chimera
pdb|3LTV|D Chain D, Mouse-Human Sod1 Chimera
pdb|3LTV|E Chain E, Mouse-Human Sod1 Chimera
pdb|3LTV|F Chain F, Mouse-Human Sod1 Chimera
Length = 153
Score = 86.3 bits (212), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 65/128 (50%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
+ A+ V+ G +G +G+I F Q P +L+G FHVH GD C SA
Sbjct: 2 MKAVCVLKG-DGPVQGTIHFEQKASGEPVVLSGQITGLTEGQHGFHVHQYGDNTQGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+PH+ HGG DE RHVGDLGN+ D + G IIGR +V+H
Sbjct: 61 GPHFNPHSKKHGGPADEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|3KM1|A Chain A, Zinc-Reconstituted Tomato Chloroplast Superoxide Dismutase
pdb|3KM1|B Chain B, Zinc-Reconstituted Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|A Chain A, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|B Chain B, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|C Chain C, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|D Chain D, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|E Chain E, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|F Chain F, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|G Chain G, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|H Chain H, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|I Chain I, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|J Chain J, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|K Chain K, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|L Chain L, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|M Chain M, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|N Chain N, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|O Chain O, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|P Chain P, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|Q Chain Q, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|R Chain R, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|S Chain S, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|T Chain T, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|U Chain U, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|V Chain V, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|W Chain W, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|X Chain X, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3MKG|A Chain A, Low Ph As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3MKG|B Chain B, Low Ph As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3PU7|A Chain A, Cu-Zn Tomato Chloroplast Superoxide Dismutase
pdb|3PU7|B Chain B, Cu-Zn Tomato Chloroplast Superoxide Dismutase
pdb|3HOG|A Chain A, Metal-Free Tomato Chloroplast Superoxide Dismutase
pdb|3S0P|A Chain A, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|B Chain B, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|C Chain C, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|D Chain D, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|E Chain E, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|F Chain F, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|G Chain G, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|H Chain H, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
Length = 154
Score = 85.1 bits (209), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 70/126 (55%), Gaps = 17/126 (13%)
Query: 8 AIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAGS 67
A+AV+ G +G + SQD D GPT +N FH+H GDT + C S G+
Sbjct: 5 AVAVLKGNSN-VEGVVTLSQD-DDGPTTVNVRITGLAPGLHGFHLHEYGDTTNGCMSTGA 62
Query: 68 HFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIHKD 112
HF+P+ ++HG DE RH GDLGN+ + + GP+S++GRA+V+H+
Sbjct: 63 HFNPNKLTHGAPGDEIRHAGDLGNIVANADGVAEVTLVDNQIPLTGPNSVVGRALVVHEL 122
Query: 113 QDDFGR 118
+DD G+
Sbjct: 123 EDDLGK 128
>pdb|1SRD|A Chain A, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
pdb|1SRD|B Chain B, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
pdb|1SRD|C Chain C, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
pdb|1SRD|D Chain D, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
Length = 154
Score = 82.4 bits (202), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 68/126 (53%), Gaps = 17/126 (13%)
Query: 8 AIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAGS 67
A+AV+ G +G + +Q+ D GPT +N FH+H GDT + C S G
Sbjct: 5 AVAVLKGTSN-VEGVVTLTQE-DDGPTTVNVRISGLAPGKHGFHLHEFGDTTNGCMSTGP 62
Query: 68 HFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIHKD 112
HF+P +HG EDE RH GDLGN+ + + GP+S++GRA+V+H+
Sbjct: 63 HFNPDKKTHGAPEDEVRHAGDLGNIVANTDGVAEATIVDNQIPLTGPNSVVGRALVVHEL 122
Query: 113 QDDFGR 118
+DD G+
Sbjct: 123 EDDLGK 128
>pdb|3F7K|A Chain A, X-Ray Crystal Structure Of An Alvinella Pompejana Cu,Zn
Superoxide Dismutase- Hydrogen Peroxide Complex
pdb|3F7L|A Chain A, X-Ray Crystal Structure Of Alvinella Pompejana Cu,Zn
Superoxide Dismutase
Length = 152
Score = 82.4 bits (202), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 66/128 (51%), Gaps = 18/128 (14%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
++A+ V+ G + G+I ++GD + G FHVH GD + C SA
Sbjct: 2 IHAVCVLKG-DSPVTGTIHLKEEGDM--VTVTGEITGLTPGKHGFHVHEFGDNTNGCTSA 58
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFG---------------DVYGPDSIIGRAIVIH 110
G HF+PH HG EDE+RH GDLGN+ + GPDS+IGR +V+H
Sbjct: 59 GGHFNPHGKEHGAPEDENRHAGDLGNVVAGEDGKAVINMKDKLVKLTGPDSVIGRTLVVH 118
Query: 111 KDQDDFGR 118
D+DD GR
Sbjct: 119 VDEDDLGR 126
>pdb|3L9Y|A Chain A, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
The Silkworm Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9Y|B Chain B, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
The Silkworm Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
Length = 154
Score = 82.0 bits (201), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 63/126 (50%), Gaps = 17/126 (13%)
Query: 8 AIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAGS 67
A AV R G G++FF Q + P +++G FHVH GD + C SAG+
Sbjct: 3 AKAVCVLR-GDVSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSAGA 61
Query: 68 HFDPHNMSHGGKEDEHRHVGDLGNLFG----------------DVYGPDSIIGRAIVIHK 111
HF+P HGG RHVGDLGN+ ++GP+SIIGR +V+H
Sbjct: 62 HFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVVHA 121
Query: 112 DQDDFG 117
D DD G
Sbjct: 122 DPDDLG 127
>pdb|3L9E|A Chain A, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9E|B Chain B, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9E|C Chain C, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9E|D Chain D, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
Length = 154
Score = 82.0 bits (201), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 63/126 (50%), Gaps = 17/126 (13%)
Query: 8 AIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAGS 67
A AV R G G++FF Q + P +++G FHVH GD + C SAG+
Sbjct: 3 AKAVCVLR-GDVSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSAGA 61
Query: 68 HFDPHNMSHGGKEDEHRHVGDLGNLFG----------------DVYGPDSIIGRAIVIHK 111
HF+P HGG RHVGDLGN+ ++GP+SIIGR +V+H
Sbjct: 62 HFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNSIIGRTLVVHA 121
Query: 112 DQDDFG 117
D DD G
Sbjct: 122 DPDDLG 127
>pdb|3KBE|A Chain A, Metal-Free C. Elegans Cu,Zn Superoxide Dismutase
pdb|3KBF|A Chain A, C. Elegans Cu,Zn Superoxide Dismutase
Length = 157
Score = 82.0 bits (201), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 17/126 (13%)
Query: 8 AIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAGS 67
A+AV+ G G+I+ +Q ++ ++ G FHVH GD+ + C SAG
Sbjct: 4 AVAVLRGET--VTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGP 61
Query: 68 HFDPHNMSHGGKEDEHRHVGDLGNL---------------FGDVYGPDSIIGRAIVIHKD 112
HF+P +HGG + E RHVGDLGN+ +YGP++++GR++V+H
Sbjct: 62 HFNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAG 121
Query: 113 QDDFGR 118
QDD G
Sbjct: 122 QDDLGE 127
>pdb|3CE1|A Chain A, Crystal Structure Of The CuZN SUPEROXIDE DISMUTASE FROM
Cryptococcus Liquefaciens Strain N6
Length = 168
Score = 81.6 bits (200), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 68/131 (51%), Gaps = 17/131 (12%)
Query: 4 NKVNAIAVITGREGGPKGSIFFSQDGDHGPTILNG-YXXXXXXXXXXFHVHAAGDTRHEC 62
+ + AIAV+ G + +G I F+Q+ GP ++G FHVH GD + C
Sbjct: 3 STIKAIAVLKG-DSPVQGVITFTQESSGGPVTVSGEIKNMDANAQRGFHVHQFGDNSNGC 61
Query: 63 NSAGSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAI 107
SAG HF+P +HG + E RHVGDLGN+ D + GP SIIGR I
Sbjct: 62 TSAGPHFNPTGTNHGDRTAEVRHVGDLGNVKTDASGVAKVQISDSQLSLVGPHSIIGRTI 121
Query: 108 VIHKDQDDFGR 118
VIH +DD G+
Sbjct: 122 VIHAGEDDLGK 132
>pdb|1PTZ|A Chain A, Crystal Structure Of The Human Cu, Zn Superoxide
Dismutase, Familial Amyotrophic Lateral Sclerosis (Fals)
Mutant H43r
pdb|1PTZ|B Chain B, Crystal Structure Of The Human Cu, Zn Superoxide
Dismutase, Familial Amyotrophic Lateral Sclerosis (Fals)
Mutant H43r
Length = 153
Score = 81.6 bits (200), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 65/128 (50%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+AV+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLRGFHVHEFGDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G SIIGR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|1SOS|A Chain A, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|F Chain F, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|B Chain B, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|G Chain G, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|C Chain C, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|H Chain H, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|D Chain D, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|I Chain I, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|E Chain E, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|J Chain J, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
Length = 154
Score = 81.3 bits (199), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 65/128 (50%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+AV+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 3 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G SIIGR +V+H
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVH 121
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 122 EKADDLGK 129
>pdb|1L3N|A Chain A, The Solution Structure Of Reduced Dimeric Copper Zinc Sod:
The Structural Effects Of Dimerization
pdb|1L3N|B Chain B, The Solution Structure Of Reduced Dimeric Copper Zinc Sod:
The Structural Effects Of Dimerization
pdb|2AF2|A Chain A, Solution Structure Of Disulfide Reduced And Copper
Depleted Human Superoxide Dismutase
pdb|2AF2|B Chain B, Solution Structure Of Disulfide Reduced And Copper
Depleted Human Superoxide Dismutase
pdb|2LU5|A Chain A, Structure And Chemical Shifts Of Cu(I),Zn(Ii) Superoxide
Dismutase By Solid-State Nmr
Length = 153
Score = 81.3 bits (199), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 65/128 (50%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+AV+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G SIIGR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|1N18|A Chain A, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|B Chain B, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|C Chain C, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|D Chain D, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|E Chain E, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|F Chain F, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|G Chain G, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|H Chain H, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|I Chain I, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|J Chain J, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
Length = 154
Score = 81.3 bits (199), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 65/128 (50%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+AV+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 3 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G SIIGR +V+H
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVH 121
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 122 EKADDLGK 129
>pdb|1FUN|A Chain A, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|F Chain F, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|B Chain B, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|G Chain G, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|C Chain C, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|H Chain H, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|D Chain D, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|I Chain I, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|E Chain E, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|J Chain J, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
Length = 153
Score = 80.9 bits (198), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 65/128 (50%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+AV+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G SIIGR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|3ECW|A Chain A, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|B Chain B, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|C Chain C, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|D Chain D, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
Length = 153
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 64/128 (50%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G FHVH GD R C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNRAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G IIGR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|3GTV|A Chain A, Human-Mouse Sod1 Chimera
pdb|3GTV|B Chain B, Human-Mouse Sod1 Chimera
pdb|3GTV|C Chain C, Human-Mouse Sod1 Chimera
pdb|3GTV|D Chain D, Human-Mouse Sod1 Chimera
pdb|3GTV|E Chain E, Human-Mouse Sod1 Chimera
pdb|3GTV|F Chain F, Human-Mouse Sod1 Chimera
pdb|3GTV|G Chain G, Human-Mouse Sod1 Chimera
pdb|3GTV|H Chain H, Human-Mouse Sod1 Chimera
pdb|3GTV|I Chain I, Human-Mouse Sod1 Chimera
pdb|3GTV|J Chain J, Human-Mouse Sod1 Chimera
pdb|3GTV|K Chain K, Human-Mouse Sod1 Chimera
pdb|3GTV|L Chain L, Human-Mouse Sod1 Chimera
Length = 153
Score = 80.5 bits (197), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 64/128 (50%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFG---------------DVYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ + G SIIGR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTAGKDGVANVSIEDRVISLSGEHSIIGRTMVVH 120
Query: 111 KDQDDFGR 118
+ QDD G+
Sbjct: 121 EKQDDLGK 128
>pdb|1F1G|A Chain A, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|B Chain B, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|C Chain C, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|D Chain D, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|E Chain E, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|F Chain F, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
Length = 154
Score = 80.5 bits (197), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 66/129 (51%), Gaps = 17/129 (13%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILN-GYXXXXXXXXXXFHVHAAGDTRHECNS 64
V A+AV+ G + G G + F Q + PT ++ FH+H GD + C S
Sbjct: 2 VQAVAVLKG-DAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVS 60
Query: 65 AGSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVI 109
AG HF+P +HG DE RHVGD+GN+ D + GP S++GR++VI
Sbjct: 61 AGPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVI 120
Query: 110 HKDQDDFGR 118
H QDD G+
Sbjct: 121 HAGQDDLGK 129
>pdb|1SDY|A Chain A, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1SDY|B Chain B, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1SDY|C Chain C, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1SDY|D Chain D, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1B4L|A Chain A, 15 Atmosphere Oxygen Yeast CuZN SUPEROXIDE DISMUTASE ROOM
Temperature (298k) Structure
pdb|1YAZ|A Chain A, Azide-Bound Yeast Cu(Ii)ZN SUPEROXIDE DISMUTASE ROOM
Temperature (298k) Structure
pdb|1JCV|A Chain A, Reduced Bridge-Broken Yeast CuZN SUPEROXIDE DISMUTASE LOW
TEMPERATURE (-180c) Structure
pdb|1YSO|A Chain A, Yeast Cu, Zn Superoxide Dismutase With The Reduced Bridge
Broken
pdb|2JCW|A Chain A, Reduced Bridge-Broken Yeast CuZN SUPEROXIDE DISMUTASE ROOM
Temperature (298k) Structure
Length = 153
Score = 80.1 bits (196), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 66/129 (51%), Gaps = 17/129 (13%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILN-GYXXXXXXXXXXFHVHAAGDTRHECNS 64
V A+AV+ G + G G + F Q + PT ++ FH+H GD + C S
Sbjct: 1 VQAVAVLKG-DAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVS 59
Query: 65 AGSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVI 109
AG HF+P +HG DE RHVGD+GN+ D + GP S++GR++VI
Sbjct: 60 AGPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVI 119
Query: 110 HKDQDDFGR 118
H QDD G+
Sbjct: 120 HAGQDDLGK 128
>pdb|3SOD|O Chain O, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
pdb|3SOD|Y Chain Y, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
pdb|3SOD|G Chain G, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
pdb|3SOD|B Chain B, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
Length = 152
Score = 80.1 bits (196), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 65/128 (50%), Gaps = 18/128 (14%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+AV+ G +G +G+I F GD ++ G FHVH GD C SA
Sbjct: 3 TKAVAVLKG-DGPVQGTIHFEAKGD--TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSA 59
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G SIIGR +V+H
Sbjct: 60 GPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVH 119
Query: 111 KDQDDFGR 118
+ DD GR
Sbjct: 120 EKPDDLGR 127
>pdb|2GBT|A Chain A, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|B Chain B, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|C Chain C, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|D Chain D, C6aC111A CUZN SUPEROXIDE DISMUTASE
Length = 153
Score = 80.1 bits (196), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 65/128 (50%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+AV+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G +IIGR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|1E9O|A Chain A, Crystal Structure Of Bovine Sod - 1 Of 3
Length = 152
Score = 79.7 bits (195), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 18/128 (14%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
+A+ V++G +G +G+I F GD ++ G FHVH GD C SA
Sbjct: 3 TSAVCVLSG-DGPVQGTIHFEAKGD--TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSA 59
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G SIIGR +V+H
Sbjct: 60 GPHFNPLSKKHGGPKDEERHVGDLGNVTADSNGVAIVDIVDPLISLSGEYSIIGRTMVVH 119
Query: 111 KDQDDFGR 118
+ DD GR
Sbjct: 120 EKPDDLGR 127
>pdb|1E9Q|A Chain A, Crystal Structure Of Bovine Cu Zn Sod-(1 Of 3)
Length = 151
Score = 79.7 bits (195), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 18/128 (14%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
+A+ V++G +G +G+I F GD ++ G FHVH GD C SA
Sbjct: 2 TSAVCVLSG-DGPVQGTIHFEAKGD--TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSA 58
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G SIIGR +V+H
Sbjct: 59 GPHFNPLSKKHGGPKDEERHVGDLGNVTADSNGVAIVDIVDPLISLSGEYSIIGRTMVVH 118
Query: 111 KDQDDFGR 118
+ DD GR
Sbjct: 119 EKPDDLGR 126
>pdb|1SDA|O Chain O, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
pdb|1SDA|Y Chain Y, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
pdb|1SDA|B Chain B, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
pdb|1SDA|G Chain G, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
Length = 152
Score = 79.7 bits (195), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 64/128 (50%), Gaps = 18/128 (14%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G+I F GD ++ G FHVH GD C SA
Sbjct: 3 TKAVCVLKG-DGPVQGTIHFEAKGD--TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSA 59
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G SIIGR +V+H
Sbjct: 60 GPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLISLSGEXSIIGRTMVVH 119
Query: 111 KDQDDFGR 118
+ DD GR
Sbjct: 120 EKPDDLGR 127
>pdb|1DSW|A Chain A, The Solution Structure Of A Monomeric, Reduced Form Of
Human Copper, Zinc Superoxide Dismutase Bearing The Same
Charge As The Native Protein
Length = 153
Score = 79.3 bits (194), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 64/128 (50%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+AV+ G +G +G I F Q +GP + G FHVH D C SA
Sbjct: 2 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G SIIGR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|1N19|A Chain A, Structure Of The Hsod A4v Mutant
pdb|1N19|B Chain B, Structure Of The Hsod A4v Mutant
Length = 154
Score = 79.3 bits (194), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 64/128 (50%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
+AV+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 3 TKVVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G SIIGR +V+H
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVH 121
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 122 EKADDLGK 129
>pdb|1XSO|A Chain A, Three-Dimensional Structure Of Xenopus Laevis Cu,Zn
Superoxide Dismutase B Determined By X-Ray
Crystallography At 1.5 Angstroms Resolution
pdb|1XSO|B Chain B, Three-Dimensional Structure Of Xenopus Laevis Cu,Zn
Superoxide Dismutase B Determined By X-Ray
Crystallography At 1.5 Angstroms Resolution
Length = 150
Score = 79.3 bits (194), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 64/127 (50%), Gaps = 16/127 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
V A+ V+ G G KG + F Q D G + G FH+H GD + C SA
Sbjct: 1 VKAVCVLAG-SGDVKGVVHFEQQ-DEGAVSVEGKIEGLTDGLHGFHIHVFGDNTNGCMSA 58
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD--------------VYGPDSIIGRAIVIHK 111
GSHF+P N +HG D RHVGDLGN+ + + GP+SIIGR V+H+
Sbjct: 59 GSHFNPENKNHGAPGDTDRHVGDLGNVTAEGGVAQFKITDSLISLKGPNSIIGRTAVVHE 118
Query: 112 DQDDFGR 118
DD G+
Sbjct: 119 KADDLGK 125
>pdb|1BA9|A Chain A, The Solution Structure Of Reduced Monomeric Superoxide
Dismutase, Nmr, 36 Structures
Length = 153
Score = 79.3 bits (194), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 64/128 (50%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+AV+ G +G +G I F Q +GP + G FHVH D C SA
Sbjct: 2 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G SIIGR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|1MFM|A Chain A, Monomeric Human Sod Mutant F50eG51EE133Q AT ATOMIC
Resolution
pdb|1KMG|A Chain A, The Solution Structure Of Monomeric Copper-Free Superoxide
Dismutase
pdb|1RK7|A Chain A, Solution Structure Of Apo Cu,Zn Superoxide Dismutase: Role
Of Metal Ions In Protein Folding
Length = 153
Score = 79.3 bits (194), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 64/128 (50%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+AV+ G +G +G I F Q +GP + G FHVH D C SA
Sbjct: 2 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G SIIGR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|1E9P|A Chain A, Crystal Structure Of Bovine Cu, Zn Sod To 1.7 Angstrom (3
Of 3)
Length = 151
Score = 79.0 bits (193), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 65/128 (50%), Gaps = 18/128 (14%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
+A+ V++G +G +G+I F GD ++ G FHVH GD C SA
Sbjct: 2 TSAVCVLSG-DGPVQGTIHFEAKGD--TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSA 58
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG DE RHVGDLGN+ D + G SIIGR +V+H
Sbjct: 59 GPHFNPLSKKHGGPSDEERHVGDLGNVTADSNGVAIVDIVDPLISLSGEYSIIGRTMVVH 118
Query: 111 KDQDDFGR 118
+ DD GR
Sbjct: 119 EKPDDLGR 126
>pdb|1Q0E|A Chain A, Atomic Resolution (1.15 ) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase
pdb|1Q0E|B Chain B, Atomic Resolution (1.15 ) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase
pdb|2SOD|O Chain O, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
pdb|2SOD|Y Chain Y, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
pdb|2SOD|B Chain B, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
pdb|2SOD|G Chain G, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
Length = 152
Score = 78.6 bits (192), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 64/128 (50%), Gaps = 18/128 (14%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G+I F GD ++ G FHVH GD C SA
Sbjct: 3 TKAVCVLKG-DGPVQGTIHFEAKGD--TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSA 59
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G SIIGR +V+H
Sbjct: 60 GPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVH 119
Query: 111 KDQDDFGR 118
+ DD GR
Sbjct: 120 EKPDDLGR 127
>pdb|1COB|A Chain A, Crystal Structure Solution And Refinement Of The
Semisynthetic Cobalt Substituted Bovine Erythrocyte
Enzyme Superoxide Dismutase At 2.0 Angstroms Resolution
pdb|1COB|B Chain B, Crystal Structure Solution And Refinement Of The
Semisynthetic Cobalt Substituted Bovine Erythrocyte
Enzyme Superoxide Dismutase At 2.0 Angstroms Resolution
pdb|1SXA|A Chain A, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXA|B Chain B, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXB|A Chain A, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXB|B Chain B, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXC|A Chain A, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXC|B Chain B, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXN|A Chain A, Reduced Bovine Superoxide Dismutase At Ph 5.0
pdb|1SXN|B Chain B, Reduced Bovine Superoxide Dismutase At Ph 5.0
pdb|1SXS|A Chain A, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Thiocyanate
pdb|1SXS|B Chain B, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Thiocyanate
pdb|1SXZ|A Chain A, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Azide
pdb|1SXZ|B Chain B, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Azide
pdb|1CBJ|A Chain A, Crystal Structure Of Bovine Superoxide Dismutase Crystal.
pdb|1CBJ|B Chain B, Crystal Structure Of Bovine Superoxide Dismutase Crystal.
pdb|2AEO|A Chain A, Crystal Structure Of Cisplatinated Bovine Cu,Zn Superoxide
Dismutase
pdb|2AEO|B Chain B, Crystal Structure Of Cisplatinated Bovine Cu,Zn Superoxide
Dismutase
pdb|2Z7U|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7U|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7W|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7W|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Y|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Y|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Z|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Z|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2ZOW|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2ZOW|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|3HW7|A Chain A, High Pressure (0.57 Gpa) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase At 2.0 Angstroms
pdb|3HW7|B Chain B, High Pressure (0.57 Gpa) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase At 2.0 Angstroms
Length = 151
Score = 78.6 bits (192), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 64/128 (50%), Gaps = 18/128 (14%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G+I F GD ++ G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGTIHFEAKGD--TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSA 58
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G SIIGR +V+H
Sbjct: 59 GPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVH 118
Query: 111 KDQDDFGR 118
+ DD GR
Sbjct: 119 EKPDDLGR 126
>pdb|1F1A|A Chain A, Crystal Structure Of Yeast H48q Cuznsod Fals Mutant Analog
Length = 154
Score = 78.6 bits (192), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 65/129 (50%), Gaps = 17/129 (13%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILN-GYXXXXXXXXXXFHVHAAGDTRHECNS 64
V A+AV+ G + G G + F Q + PT ++ FH+ GD + C S
Sbjct: 2 VQAVAVLKG-DAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIQEFGDATNGCVS 60
Query: 65 AGSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVI 109
AG HF+P +HG DE RHVGD+GN+ D + GP S++GR++VI
Sbjct: 61 AGPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVI 120
Query: 110 HKDQDDFGR 118
H QDD G+
Sbjct: 121 HAGQDDLGK 129
>pdb|1AZV|A Chain A, Familial Als Mutant G37r Cuznsod (Human)
pdb|1AZV|B Chain B, Familial Als Mutant G37r Cuznsod (Human)
Length = 153
Score = 78.2 bits (191), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKRLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G IIGR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|4BCY|A Chain A, Monomeric Human Cu,zn Superoxide Dismutase, Mutation H43f
Length = 153
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 64/128 (50%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+AV+ G +G +G I F Q +GP + G FHVH D C SA
Sbjct: 2 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLFGFHVHEEEDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G +IIGR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|2ZKY|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|C Chain C, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|D Chain D, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|E Chain E, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|F Chain F, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|G Chain G, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|H Chain H, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|I Chain I, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|J Chain J, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
Length = 159
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 8 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 66
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G IIGR +V+H
Sbjct: 67 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDAVADVSIEDSVISLSGDHCIIGRTLVVH 126
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 127 EKADDLGK 134
>pdb|2XJK|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase
Length = 153
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 64/128 (50%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+AV+ G +G +G I F Q +GP + G FHVH D C SA
Sbjct: 2 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G +IIGR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|3GZP|A Chain A, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|B Chain B, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|C Chain C, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|D Chain D, Human Sod1 G93a Metal-Free Variant
pdb|2WZ6|A Chain A, G93a Sod1 Mutant Complexed With Quinazoline.
pdb|2WZ6|F Chain F, G93a Sod1 Mutant Complexed With Quinazoline
Length = 153
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G IIGR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDAVADVSIEDSVISLSGDHCIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|3GZO|A Chain A, Human Sod1 G93a Variant
pdb|3GZO|B Chain B, Human Sod1 G93a Variant
pdb|3GZO|C Chain C, Human Sod1 G93a Variant
pdb|3GZO|D Chain D, Human Sod1 G93a Variant
pdb|3GZO|E Chain E, Human Sod1 G93a Variant
pdb|3GZO|F Chain F, Human Sod1 G93a Variant
pdb|3GZO|G Chain G, Human Sod1 G93a Variant
pdb|3GZO|H Chain H, Human Sod1 G93a Variant
pdb|3GZO|I Chain I, Human Sod1 G93a Variant
pdb|3GZO|J Chain J, Human Sod1 G93a Variant
pdb|2WKO|A Chain A, Structure Of Metal Loaded Pathogenic Sod1 Mutant G93a
Length = 154
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 3 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G IIGR +V+H
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDAVADVSIEDSVISLSGDHCIIGRTLVVH 121
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 122 EKADDLGK 129
>pdb|4B3E|A Chain A, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|B Chain B, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|C Chain C, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|D Chain D, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|E Chain E, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|F Chain F, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|G Chain G, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|H Chain H, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|I Chain I, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|J Chain J, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate
Length = 154
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 3 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G IIGR +V+H
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 121
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 122 EKADDLGK 129
>pdb|1HL4|A Chain A, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|B Chain B, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|C Chain C, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|D Chain D, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1SPD|A Chain A, Amyotrophic Lateral Sclerosis And Structural Defects In
Cu,Zn Superoxide Dismutase
pdb|1SPD|B Chain B, Amyotrophic Lateral Sclerosis And Structural Defects In
Cu,Zn Superoxide Dismutase
Length = 154
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 3 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G IIGR +V+H
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 121
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 122 EKADDLGK 129
>pdb|2WYT|A Chain A, 1.0 A Resolution Structure Of L38v Sod1 Mutant
pdb|2WYT|F Chain F, 1.0 A Resolution Structure Of L38v Sod1 Mutant
pdb|2WZ0|A Chain A, L38v Sod1 Mutant Complexed With Aniline.
pdb|2WZ0|F Chain F, L38v Sod1 Mutant Complexed With Aniline.
pdb|2WZ5|A Chain A, L38v Sod1 Mutant Complexed With L-Methionine.
pdb|2WZ5|F Chain F, L38v Sod1 Mutant Complexed With L-Methionine
Length = 153
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGVTEGLHGFHVHEFGDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G IIGR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|1HL5|A Chain A, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|B Chain B, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|C Chain C, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|D Chain D, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|E Chain E, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|F Chain F, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|G Chain G, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|H Chain H, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|I Chain I, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|J Chain J, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|K Chain K, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|L Chain L, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|M Chain M, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|N Chain N, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|O Chain O, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|P Chain P, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|Q Chain Q, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|S Chain S, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1PU0|A Chain A, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|B Chain B, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|C Chain C, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|D Chain D, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|E Chain E, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|F Chain F, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|G Chain G, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|H Chain H, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|I Chain I, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|J Chain J, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|2C9U|A Chain A, 1.24 Angstroms Resolution Structure Of As-Isolated Cu-Zn
Human Superoxide Dismutase
pdb|2C9U|F Chain F, 1.24 Angstroms Resolution Structure Of As-Isolated Cu-Zn
Human Superoxide Dismutase
pdb|2C9V|A Chain A, Atomic Resolution Structure Of Cu-Zn Human Superoxide
Dismutase
pdb|2C9V|F Chain F, Atomic Resolution Structure Of Cu-Zn Human Superoxide
Dismutase
pdb|2V0A|A Chain A, Atomic Resolution Crystal Structure Of Human Superoxide
Dismutase
pdb|2V0A|F Chain F, Atomic Resolution Crystal Structure Of Human Superoxide
Dismutase
pdb|3ECU|A Chain A, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|B Chain B, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|C Chain C, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|D Chain D, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3KH3|A Chain A, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|B Chain B, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|C Chain C, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|D Chain D, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|E Chain E, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|F Chain F, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|G Chain G, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|H Chain H, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|I Chain I, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|J Chain J, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|K Chain K, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|L Chain L, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH4|A Chain A, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|B Chain B, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|C Chain C, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|D Chain D, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|E Chain E, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|F Chain F, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3RE0|A Chain A, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|B Chain B, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|C Chain C, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|D Chain D, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
Length = 153
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G IIGR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|2WKO|F Chain F, Structure Of Metal Loaded Pathogenic Sod1 Mutant G93a
Length = 154
Score = 77.8 bits (190), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 3 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G IIGR +V+H
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDAVADVSIEDSVISLSGDHXIIGRTLVVH 121
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 122 EKADDLGK 129
>pdb|2WYZ|A Chain A, L38v Sod1 Mutant Complexed With Ump
pdb|2WYZ|F Chain F, L38v Sod1 Mutant Complexed With Ump
Length = 153
Score = 77.8 bits (190), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGVTEGLHGFHVHEFGDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G IIGR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|2C9S|A Chain A, 1.24 Angstroms Resolution Structure Of Zn-Zn Human
Superoxide Dismutase
pdb|2C9S|F Chain F, 1.24 Angstroms Resolution Structure Of Zn-Zn Human
Superoxide Dismutase
pdb|3T5W|A Chain A, 2me Modified Human Sod1
pdb|3T5W|B Chain B, 2me Modified Human Sod1
pdb|3T5W|D Chain D, 2me Modified Human Sod1
pdb|3T5W|E Chain E, 2me Modified Human Sod1
pdb|3T5W|F Chain F, 2me Modified Human Sod1
pdb|3T5W|G Chain G, 2me Modified Human Sod1
pdb|3T5W|H Chain H, 2me Modified Human Sod1
pdb|3T5W|I Chain I, 2me Modified Human Sod1
pdb|3T5W|J Chain J, 2me Modified Human Sod1
pdb|3T5W|K Chain K, 2me Modified Human Sod1
pdb|3T5W|L Chain L, 2me Modified Human Sod1
pdb|3T5W|M Chain M, 2me Modified Human Sod1
Length = 153
Score = 77.8 bits (190), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G IIGR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|1OZU|A Chain A, Crystal Structure Of Familial Als Mutant S134n Of Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 1.3a Resolution
pdb|1OZU|B Chain B, Crystal Structure Of Familial Als Mutant S134n Of Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 1.3a Resolution
Length = 153
Score = 77.8 bits (190), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G IIGR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|4A7G|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 4-
Methylpiperazin-1-Yl)quinazoline In The P21 Space Group
Length = 153
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 64/128 (50%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNL------FGDVYGPDSII---------GRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ DV DS+I GR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSTEDSVISLSGDHCITGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|1F18|A Chain A, Crystal Structure Of Yeast Copper-Zinc Superoxide
Dismutase Mutant Gly85arg
Length = 154
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 65/129 (50%), Gaps = 17/129 (13%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILN-GYXXXXXXXXXXFHVHAAGDTRHECNS 64
V A+AV+ G + G G + F Q + PT ++ FH+H GD + C S
Sbjct: 2 VQAVAVLKG-DAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVS 60
Query: 65 AGSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVI 109
AG HF+P +HG DE RHVGD+ N+ D + GP S++GR++VI
Sbjct: 61 AGPHFNPFKKTHGAPTDEVRHVGDMRNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVI 120
Query: 110 HKDQDDFGR 118
H QDD G+
Sbjct: 121 HAGQDDLGK 129
>pdb|1E9P|B Chain B, Crystal Structure Of Bovine Cu, Zn Sod To 1.7 Angstrom (3
Of 3)
Length = 151
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 65/128 (50%), Gaps = 18/128 (14%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
+A+ V++G +G +G+I F GD ++ G FHVH GD C SA
Sbjct: 2 TSAVCVLSG-DGPVQGTIHFEASGD--TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSA 58
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG D+ RHVGDLGN+ D + G SIIGR +V+H
Sbjct: 59 GPHFNPLSKKHGGPSDDERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVH 118
Query: 111 KDQDDFGR 118
+ DD GR
Sbjct: 119 EKPDDLGR 126
>pdb|1F1D|A Chain A, Crystal Structure Of Yeast H46c Cuznsod Mutant
Length = 154
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 65/129 (50%), Gaps = 17/129 (13%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILN-GYXXXXXXXXXXFHVHAAGDTRHECNS 64
V A+AV+ G + G G + F Q + PT ++ F +H GD + C S
Sbjct: 2 VQAVAVLKG-DAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFCIHEFGDATNGCVS 60
Query: 65 AGSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVI 109
AG HF+P +HG DE RHVGD+GN+ D + GP S++GR++VI
Sbjct: 61 AGPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVI 120
Query: 110 HKDQDDFGR 118
H QDD G+
Sbjct: 121 HAGQDDLGK 129
>pdb|1JK9|A Chain A, Heterodimer Between H48f-Ysod1 And Yccs
pdb|1JK9|C Chain C, Heterodimer Between H48f-Ysod1 And Yccs
Length = 153
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 65/129 (50%), Gaps = 17/129 (13%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILN-GYXXXXXXXXXXFHVHAAGDTRHECNS 64
V A+AV+ G + G G + F Q + PT ++ FH+ GD + C S
Sbjct: 1 VQAVAVLKG-DAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIFEFGDATNGCVS 59
Query: 65 AGSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVI 109
AG HF+P +HG DE RHVGD+GN+ D + GP S++GR++VI
Sbjct: 60 AGPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVI 119
Query: 110 HKDQDDFGR 118
H QDD G+
Sbjct: 120 HAGQDDLGK 128
>pdb|1B4T|A Chain A, H48c Yeast Cu(Ii)ZN SUPEROXIDE DISMUTASE ROOM TEMPERATURE
(298k) Structure
Length = 153
Score = 77.0 bits (188), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 65/129 (50%), Gaps = 17/129 (13%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILN-GYXXXXXXXXXXFHVHAAGDTRHECNS 64
V A+AV+ G + G G + F Q + PT ++ FH+ GD + C S
Sbjct: 1 VQAVAVLKG-DAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHICEFGDATNGCVS 59
Query: 65 AGSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVI 109
AG HF+P +HG DE RHVGD+GN+ D + GP S++GR++VI
Sbjct: 60 AGPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVI 119
Query: 110 HKDQDDFGR 118
H QDD G+
Sbjct: 120 HAGQDDLGK 128
>pdb|1CB4|A Chain A, Crystal Structure Of Copper, Zinc Superoxide Dismutase
pdb|1CB4|B Chain B, Crystal Structure Of Copper, Zinc Superoxide Dismutase
Length = 151
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 64/128 (50%), Gaps = 18/128 (14%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G+I F GD ++ G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGTIHFEAKGD--TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSA 58
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +D+ RHVGDLGN+ D + G SIIGR +V+H
Sbjct: 59 GPHFNPLSKKHGGPKDDERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVH 118
Query: 111 KDQDDFGR 118
+ DD GR
Sbjct: 119 EKPDDLGR 126
>pdb|1E9Q|B Chain B, Crystal Structure Of Bovine Cu Zn Sod-(1 Of 3)
Length = 151
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 64/128 (50%), Gaps = 18/128 (14%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G+I F GD ++ G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGTIHFEAKGD--TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSA 58
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +D+ RHVGDLGN+ D + G SIIGR +V+H
Sbjct: 59 GPHFNPLSKKHGGPKDDERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVH 118
Query: 111 KDQDDFGR 118
+ DD GR
Sbjct: 119 EKPDDLGR 126
>pdb|1E9O|B Chain B, Crystal Structure Of Bovine Sod - 1 Of 3
Length = 152
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 64/128 (50%), Gaps = 18/128 (14%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G+I F GD ++ G FHVH GD C SA
Sbjct: 3 TKAVCVLKG-DGPVQGTIHFEAKGD--TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSA 59
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +D+ RHVGDLGN+ D + G SIIGR +V+H
Sbjct: 60 GPHFNPLSKKHGGPKDDERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVH 119
Query: 111 KDQDDFGR 118
+ DD GR
Sbjct: 120 EKPDDLGR 127
>pdb|1UXL|A Chain A, I113t Mutant Of Human Sod1
pdb|1UXL|B Chain B, I113t Mutant Of Human Sod1
pdb|1UXL|C Chain C, I113t Mutant Of Human Sod1
pdb|1UXL|D Chain D, I113t Mutant Of Human Sod1
pdb|1UXL|E Chain E, I113t Mutant Of Human Sod1
pdb|1UXL|F Chain F, I113t Mutant Of Human Sod1
pdb|1UXL|G Chain G, I113t Mutant Of Human Sod1
pdb|1UXL|H Chain H, I113t Mutant Of Human Sod1
pdb|1UXL|I Chain I, I113t Mutant Of Human Sod1
pdb|1UXL|J Chain J, I113t Mutant Of Human Sod1
pdb|3ECV|A Chain A, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|B Chain B, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|C Chain C, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|D Chain D, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|4A7G|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 4-
Methylpiperazin-1-Yl)quinazoline In The P21 Space Group.
pdb|4A7Q|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 4-(4-
Methyl-1,4-Diazepan-1-Yl)quinazoline In The P21 Space
Group.
pdb|4A7Q|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 4-(4-
Methyl-1,4-Diazepan-1-Yl)quinazoline In The P21 Space
Group.
pdb|4A7S|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 5-
Fluorouridine In The P21 Space Group
pdb|4A7S|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 5-
Fluorouridine In The P21 Space Group
pdb|4A7T|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With
Isoproteranol In The P21 Space Group
pdb|4A7T|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With
Isoproteranol In The P21 Space Group
pdb|4A7U|A Chain A, Structure Of Human I113t Sod1 Complexed With Adrenaline In
The P21 Space Group.
pdb|4A7U|F Chain F, Structure Of Human I113t Sod1 Complexed With Adrenaline In
The P21 Space Group.
pdb|4A7V|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With
Dopamine In The P21 Space Group
pdb|4A7V|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With
Dopamine In The P21 Space Group
Length = 153
Score = 76.6 bits (187), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 64/128 (50%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNL------FGDVYGPDSII---------GRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ DV DS+I GR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCITGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|1UXM|A Chain A, A4v Mutant Of Human Sod1
pdb|1UXM|B Chain B, A4v Mutant Of Human Sod1
pdb|1UXM|C Chain C, A4v Mutant Of Human Sod1
pdb|1UXM|D Chain D, A4v Mutant Of Human Sod1
pdb|1UXM|E Chain E, A4v Mutant Of Human Sod1
pdb|1UXM|F Chain F, A4v Mutant Of Human Sod1
pdb|1UXM|G Chain G, A4v Mutant Of Human Sod1
pdb|1UXM|H Chain H, A4v Mutant Of Human Sod1
pdb|1UXM|I Chain I, A4v Mutant Of Human Sod1
pdb|1UXM|J Chain J, A4v Mutant Of Human Sod1
pdb|1UXM|K Chain K, A4v Mutant Of Human Sod1
pdb|1UXM|L Chain L, A4v Mutant Of Human Sod1
Length = 153
Score = 76.6 bits (187), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 62/128 (48%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKVVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G IIGR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|3GZQ|A Chain A, Human Sod1 A4v Metal-Free Variant
pdb|3GZQ|B Chain B, Human Sod1 A4v Metal-Free Variant
Length = 154
Score = 76.6 bits (187), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 62/128 (48%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 3 TKVVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G IIGR +V+H
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 121
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 122 EKADDLGK 129
>pdb|2R27|A Chain A, Constitutively Zinc-Deficient Mutant Of Human Superoxide
Dismutase (Sod), C6a, H80s, H83s, C111s
pdb|2R27|B Chain B, Constitutively Zinc-Deficient Mutant Of Human Superoxide
Dismutase (Sod), C6a, H80s, H83s, C111s
Length = 154
Score = 76.6 bits (187), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+AV+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 3 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE R VG LGN+ D + G SIIGR +V+H
Sbjct: 62 GPHFNPLSRKHGGPKDEERSVGSLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVH 121
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 122 EKADDLGK 129
>pdb|2GBU|A Chain A, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|B Chain B, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|C Chain C, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|D Chain D, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBV|A Chain A, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|B Chain B, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|C Chain C, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|D Chain D, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|E Chain E, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|F Chain F, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|G Chain G, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|H Chain H, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|I Chain I, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|J Chain J, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
Length = 153
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 64/128 (50%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+AV+ G +G +G I F Q +GP + G FHVH GD SA
Sbjct: 2 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGATSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G +IIGR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|1OEZ|W Chain W, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|X Chain X, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|Y Chain Y, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|Z Chain Z, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OZT|M Chain M, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|N Chain N, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|G Chain G, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|H Chain H, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|K Chain K, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|L Chain L, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|I Chain I, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|J Chain J, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
Length = 153
Score = 75.9 bits (185), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 62/128 (48%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G F VH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFRVHEFGDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G IIGR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|3H2Q|A Chain A, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|B Chain B, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|C Chain C, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|D Chain D, Human Sod1 H80r Variant, P21 Crystal Form
Length = 153
Score = 75.9 bits (185), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 62/128 (48%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE R VGDLGN+ D + G IIGR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERRVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|3QQD|A Chain A, Human Sod1 H80r Variant, P212121 Crystal Form
pdb|3QQD|B Chain B, Human Sod1 H80r Variant, P212121 Crystal Form
Length = 154
Score = 75.5 bits (184), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 62/128 (48%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 3 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE R VGDLGN+ D + G IIGR +V+H
Sbjct: 62 GPHFNPLSRKHGGPKDEERRVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVH 121
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 122 EKADDLGK 129
>pdb|2ZKW|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group P21
pdb|2ZKW|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group P21
pdb|2ZKX|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|C Chain C, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|D Chain D, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
Length = 159
Score = 75.5 bits (184), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 62/128 (48%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 8 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 66
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDL N+ D + G IIGR +V+H
Sbjct: 67 GPHFNPLSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 126
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 127 EKADDLGK 134
>pdb|3MND|A Chain A, Crystallographic Analysis Of The Cystosolic CuZN
SUPEROXIDE DISMUTASE From Taenia Solium
pdb|3MND|B Chain B, Crystallographic Analysis Of The Cystosolic CuZN
SUPEROXIDE DISMUTASE From Taenia Solium
Length = 152
Score = 75.5 bits (184), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 64/127 (50%), Gaps = 18/127 (14%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
+ A+ V+ G EG KG + F+Q GD ++ FHVH GDT C SA
Sbjct: 1 MKAVCVMRGEEG-VKGVVHFTQAGD--AVKVHAEFEGLKPGKHGFHVHEFGDTTQGCTSA 57
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFG---------------DVYGPDSIIGRAIVIH 110
G+HF+PH +HG + RHVGDLGN+ + G S+IGR++VIH
Sbjct: 58 GAHFNPHGKNHGAPDAAERHVGDLGNVTAGADGKATLDLTDKMISLTGEHSVIGRSLVIH 117
Query: 111 KDQDDFG 117
D DD G
Sbjct: 118 VDPDDLG 124
>pdb|2VR7|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.58 A Resolution
pdb|2VR7|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.58 A Resolution
Length = 154
Score = 75.5 bits (184), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 62/128 (48%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 3 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDL N+ D + G IIGR +V+H
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 121
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 122 EKADDLGK 129
>pdb|2VR6|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.3 A Resolution
pdb|2VR6|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.3 A Resolution
pdb|3CQP|A Chain A, Human Sod1 G85r Variant, Structure I
pdb|3CQP|B Chain B, Human Sod1 G85r Variant, Structure I
pdb|3CQP|C Chain C, Human Sod1 G85r Variant, Structure I
pdb|3CQP|D Chain D, Human Sod1 G85r Variant, Structure I
Length = 153
Score = 75.5 bits (184), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 62/128 (48%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDL N+ D + G IIGR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|3H2P|A Chain A, Human Sod1 D124v Variant
pdb|3H2P|B Chain B, Human Sod1 D124v Variant
Length = 153
Score = 75.1 bits (183), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 62/128 (48%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G IIGR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ D G+
Sbjct: 121 EKAVDLGK 128
>pdb|2VR8|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.36 A Resolution
pdb|2VR8|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.36 A Resolution
Length = 154
Score = 75.1 bits (183), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 62/128 (48%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 3 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDL N+ D + G IIGR +V+H
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVH 121
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 122 EKADDLGK 129
>pdb|3CQQ|A Chain A, Human Sod1 G85r Variant, Structure Ii
pdb|3CQQ|B Chain B, Human Sod1 G85r Variant, Structure Ii
Length = 153
Score = 75.1 bits (183), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 62/128 (48%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDL N+ D + G IIGR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|1P1V|A Chain A, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
pdb|1P1V|B Chain B, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
pdb|1P1V|C Chain C, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
Length = 153
Score = 74.7 bits (182), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 62/128 (48%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G FHVH GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G IIGR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ D G+
Sbjct: 121 EKADHLGK 128
>pdb|3GQF|A Chain A, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|B Chain B, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|C Chain C, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|D Chain D, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|E Chain E, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|F Chain F, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3K91|A Chain A, Polysulfane Bridge In Cu-Zn Superoxide Dismutase
pdb|3K91|B Chain B, Polysulfane Bridge In Cu-Zn Superoxide Dismutase
Length = 153
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 61/128 (47%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G F V GD C SA
Sbjct: 2 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFRVQEFGDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G IIGR +V+H
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|2NNX|A Chain A, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|B Chain B, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|C Chain C, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|D Chain D, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
Length = 154
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 61/128 (47%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+ V+ G +G +G I F Q +GP + G F V GD C SA
Sbjct: 3 TKAVCVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFRVQEFGDNTAGCTSA 61
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G IIGR +V+H
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH 121
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 122 EKADDLGK 129
>pdb|2XJL|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase Without Cu
Ligands
Length = 153
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 61/128 (47%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+AV+ G +G +G I F Q +GP + G F V D C SA
Sbjct: 2 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFSVSEEEDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G HF+P + HGG +DE RHVGDLGN+ D + G +IIGR +V+
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVS 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|3HFF|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase Without Zn
Ligands
Length = 153
Score = 68.6 bits (166), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 60/128 (46%), Gaps = 16/128 (12%)
Query: 6 VNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSA 65
A+AV+ G +G +G I F Q +GP + G FHVH D C SA
Sbjct: 2 TKAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSA 60
Query: 66 GSHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIH 110
G F+P + GG +DE R VG LGN+ D + G +IIGR +V+H
Sbjct: 61 GPSFNPLSRKSGGPKDEERSVGSLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVH 120
Query: 111 KDQDDFGR 118
+ DD G+
Sbjct: 121 EKADDLGK 128
>pdb|2E46|A Chain A, Crystal Structure Analysis Of The Clock Protein Ea4
Length = 157
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 64/126 (50%), Gaps = 18/126 (14%)
Query: 8 AIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAGS 67
AIAV++ +G+I F+Q D G + G FHVH GD C S GS
Sbjct: 11 AIAVLSTET--IRGNITFTQVQD-GKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGS 67
Query: 68 HFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIHKD 112
HF+P + HG D +RHVGDLGN+ D + GP IIGRA+V+H+
Sbjct: 68 HFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEK 127
Query: 113 QDDFGR 118
DD+G+
Sbjct: 128 ADDYGK 133
>pdb|2E47|A Chain A, Crystal Structure Analysis Of The Clock Protein Ea4
(Glycosylation Form)
pdb|2E47|B Chain B, Crystal Structure Analysis Of The Clock Protein Ea4
(Glycosylation Form)
Length = 156
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 64/126 (50%), Gaps = 18/126 (14%)
Query: 8 AIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAGS 67
AIAV++ +G+I F+Q D G + G FHVH GD C S GS
Sbjct: 10 AIAVLSTET--IRGNITFTQVQD-GKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGS 66
Query: 68 HFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIHKD 112
HF+P + HG D +RHVGDLGN+ D + GP IIGRA+V+H+
Sbjct: 67 HFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEK 126
Query: 113 QDDFGR 118
DD+G+
Sbjct: 127 ADDYGK 132
>pdb|1DO5|A Chain A, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|B Chain B, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|C Chain C, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|D Chain D, Human Copper Chaperone For Superoxide Dismutase Domain Ii
Length = 154
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 58/127 (45%), Gaps = 13/127 (10%)
Query: 4 NKVNAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECN 63
+ A I G G +G + F Q ++ G HVH GD + CN
Sbjct: 1 QNLGAAVAILGGPGTVQGVVRFLQLTPE-RCLIEGTIDGLEPGLHGLHVHQYGDLTNNCN 59
Query: 64 SAGSHFDPHNMSHGGKEDEHRHVGDLGNLFGDVYGPD------------SIIGRAIVIHK 111
S G+HF+P SHGG +D RH GDLGN+ D G +IGR+++I +
Sbjct: 60 SCGNHFNPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKVWDVIGRSLIIDE 119
Query: 112 DQDDFGR 118
+DD GR
Sbjct: 120 GEDDLGR 126
>pdb|2JLP|A Chain A, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase.
pdb|2JLP|B Chain B, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase.
pdb|2JLP|C Chain C, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase.
pdb|2JLP|D Chain D, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase
Length = 222
Score = 55.1 bits (131), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 52/124 (41%), Gaps = 31/124 (25%)
Query: 11 VITGREGGPKGSI--FFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAGSH 68
V+ R+ P+ + FF+ L G+ HVH GD C S G H
Sbjct: 63 VVLFRQLAPRAKLDAFFA---------LEGFPTEPNSSSRAIHVHQFGDLSQGCESTGPH 113
Query: 69 FDPHNMSHGGKEDEHRHVGDLGN--------------LFGDVYGPDSIIGRAIVIHKDQD 114
++P + H +H GD GN L + GP SI+GRA+V+H +D
Sbjct: 114 YNPLAVPH------PQHPGDFGNFAVRDGSLWRYRAGLAASLAGPHSIVGRAVVVHAGED 167
Query: 115 DFGR 118
D GR
Sbjct: 168 DLGR 171
>pdb|1XTM|B Chain B, Crystal Structure Of The Double Mutant Y88h-p104h Of A
Sod-like Protein From Bacillus Subtilis.
pdb|1XTM|A Chain A, Crystal Structure Of The Double Mutant Y88h-p104h Of A
Sod-like Protein From Bacillus Subtilis
Length = 175
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 47/126 (37%), Gaps = 21/126 (16%)
Query: 12 ITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGD-TRHECNSAGSHFD 70
+ REG G I + D G I FH+H G R + SAG HF+
Sbjct: 26 LVNREGKAVGFIEIKESDDEGLDIHISANSLRPGASLGFHIHEKGSCVRPDFESAGGHFN 85
Query: 71 PHNMSHGGKEDEHRHVGDLGNLFGDVYG--------PDSII------------GRAIVIH 110
P N HG H GDL NL G PD+ + G A +IH
Sbjct: 86 PLNKEHGFNNPMGHHAGDLPNLEVGADGKVDVIMNAPDTSLKKGSKLNILDEDGSAFIIH 145
Query: 111 KDQDDF 116
+ DD+
Sbjct: 146 EQADDY 151
>pdb|1XTL|B Chain B, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis.
pdb|1XTL|A Chain A, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis.
pdb|1XTL|C Chain C, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis.
pdb|1XTL|D Chain D, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis
Length = 175
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 47/126 (37%), Gaps = 21/126 (16%)
Query: 12 ITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGD-TRHECNSAGSHFD 70
+ REG G I + D G I FH++ G R + SAG HF+
Sbjct: 26 LVNREGKAVGFIEIKESDDEGLDIHISANSLRPGASLGFHIYEKGSCVRPDFESAGGHFN 85
Query: 71 PHNMSHGGKEDEHRHVGDLGNLFGDVYG--------PDSII------------GRAIVIH 110
P N HG H GDL NL G PD+ + G A +IH
Sbjct: 86 PLNKEHGFNNPMGHHAGDLPNLEVGADGKVDVIMNAPDTSLKKGSKLNILDEDGSAFIIH 145
Query: 111 KDQDDF 116
+ DD+
Sbjct: 146 EQADDY 151
>pdb|1S4I|B Chain B, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
pdb|1S4I|A Chain A, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
pdb|1S4I|C Chain C, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
pdb|1S4I|D Chain D, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
Length = 175
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 46/126 (36%), Gaps = 21/126 (16%)
Query: 12 ITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGD-TRHECNSAGSHFD 70
+ REG G I + D G I FH++ G R + SAG F+
Sbjct: 26 LVNREGKAVGFIEIKESDDEGLDIHISANSLRPGASLGFHIYEKGSCVRPDFESAGGPFN 85
Query: 71 PHNMSHGGKEDEHRHVGDLGNLFGDVYG--------PDSII------------GRAIVIH 110
P N HG H GDL NL G PD+ + G A +IH
Sbjct: 86 PLNKEHGFNNPMGHHAGDLPNLEVGADGKVDVIMNAPDTSLKKGSKLNILDEDGSAFIIH 145
Query: 111 KDQDDF 116
+ DD+
Sbjct: 146 EQADDY 151
>pdb|1U3N|A Chain A, A Sod-Like Protein From B. Subtilis, Unstructured In
Solution, Becomes Ordered In The Crystal: Implications
For Function And For Fibrillogenesis
Length = 162
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 46/126 (36%), Gaps = 21/126 (16%)
Query: 12 ITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGD-TRHECNSAGSHFD 70
+ REG G I + D G I FH++ G R + SAG F+
Sbjct: 13 LVNREGKAVGFIEIKESDDEGLDIHISANSLRPGASLGFHIYEKGSCVRPDFESAGGPFN 72
Query: 71 PHNMSHGGKEDEHRHVGDLGNLFGDVYG--------PDSII------------GRAIVIH 110
P N HG H GDL NL G PD+ + G A +IH
Sbjct: 73 PLNKEHGFNNPMGHHAGDLPNLEVGADGKVDVIMNAPDTSLKKGSKLNILDEDGSAFIIH 132
Query: 111 KDQDDF 116
+ DD+
Sbjct: 133 EQADDY 138
>pdb|4BD4|A Chain A, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|B Chain B, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|C Chain C, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|D Chain D, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|E Chain E, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|F Chain F, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|G Chain G, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|H Chain H, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|I Chain I, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
Length = 110
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 16/105 (15%)
Query: 7 NAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAG 66
A+AV+ G +G +G I F Q +GP + G FHVH AG +
Sbjct: 3 KAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLFGFHVHGAGGDLGNVTA-- 59
Query: 67 SHFDPHNMSHGGKEDEHRHVGDLGNLFGDVYGPDSIIGRAIVIHK 111
D ++ ED + +L GD SIIGR +V+H+
Sbjct: 60 ---DKDGVADVSIEDS------VISLSGD----HSIIGRTLVVHE 91
>pdb|4BCZ|A Chain A, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form.
pdb|4BCZ|B Chain B, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form
Length = 110
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 43/120 (35%), Gaps = 46/120 (38%)
Query: 7 NAIAVITGREGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAG 66
A+AV+ G +G +G I F Q +GP + G FHVH AG
Sbjct: 3 KAVAVLKG-DGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHGAG---------- 51
Query: 67 SHFDPHNMSHGGKEDEHRHVGDLGNLFGD---------------VYGPDSIIGRAIVIHK 111
GDLGN+ D + G SIIGR +V+H+
Sbjct: 52 --------------------GDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHE 91
>pdb|1ESO|A Chain A, Monomeric Cu,Zn Superoxide Dismutase From Escherichia
Coli
Length = 154
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 10/53 (18%)
Query: 50 FHVHAAGDTR--------HECNSAGSHFDPHNM-SHGGKEDEHRHVGDLGNLF 93
FH+HA G + SAG H DP N H G E H+GDL L
Sbjct: 47 FHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHEGPEGAG-HLGDLPALV 98
>pdb|1OAJ|A Chain A, Active Site Copper And Zinc Ions Modulate The Quaternary
Structure Of Prokaryotic Cu,Zn Superoxide Dismutase
Length = 151
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 46/122 (37%), Gaps = 23/122 (18%)
Query: 15 REGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECN--------SAG 66
+ G P G+I SQ+ D+G + FH+H G +AG
Sbjct: 11 QTGKPVGTIELSQN-DYG-VVFIPELADLTPGMHGFHIHQNGSCASSEKDGKVVLGGAAG 68
Query: 67 SHFDP-HNMSHGGKEDEHRHVGDLGNLF--------GDVYGP----DSIIGRAIVIHKDQ 113
H+DP H HG + H GDL LF V P + G AI+IH
Sbjct: 69 GHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLATNPVLAPRLTLKELKGHAIMIHAGG 128
Query: 114 DD 115
D+
Sbjct: 129 DN 130
>pdb|2K4W|A Chain A, The Solution Structure Of The Monomeric Copper, Zinc
Superox Dismutase From Salmonella Enterica
Length = 154
Score = 25.8 bits (55), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 10/53 (18%)
Query: 50 FHVHAAGDTRHE--------CNSAGSHFDPHNM-SHGGKEDEHRHVGDLGNLF 93
FH+HA G + +AG H DP N H G E + H+GDL L
Sbjct: 47 FHIHANGSCQPAIKDGQAVAAEAAGGHLDPQNTGKHEGPEGQ-GHLGDLPVLV 98
>pdb|3LYX|A Chain A, Crystal Structure Of The Pas Domain Of The Protein
Cps_1291 From Colwellia Psychrerythraea. Northeast
Structural Genomics Consortium Target Id Csr222b
pdb|3LYX|B Chain B, Crystal Structure Of The Pas Domain Of The Protein
Cps_1291 From Colwellia Psychrerythraea. Northeast
Structural Genomics Consortium Target Id Csr222b
Length = 124
Score = 25.8 bits (55), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Query: 25 FSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECNSAGSHFDPHNMSHGGKEDEHR 84
F D + G L GY +H GDT H + S + G H+
Sbjct: 28 FIIDWNKGSETLYGYSKEQAIGQPVNMLHVPGDTEHITSEVISAVENQGKWTGEIRMLHK 87
Query: 85 --HVGDLGNLFGDVYGPDSIIGRAIVIHKD 112
H+G + ++ +YG + + A+ I++D
Sbjct: 88 DGHIGWIESMCVPIYGENYQMVGALGINRD 117
>pdb|1YAI|A Chain A, X-Ray Structure Of A Bacterial Copper,Zinc Superoxide
Dismutase
pdb|1YAI|B Chain B, X-Ray Structure Of A Bacterial Copper,Zinc Superoxide
Dismutase
pdb|1YAI|C Chain C, X-Ray Structure Of A Bacterial Copper,Zinc Superoxide
Dismutase
Length = 151
Score = 25.4 bits (54), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 45/122 (36%), Gaps = 23/122 (18%)
Query: 15 REGGPKGSIFFSQDGDHGPTILNGYXXXXXXXXXXFHVHAAGDTRHECN--------SAG 66
+ G P G+I SQ+ +G + FH+H G +AG
Sbjct: 11 QTGKPVGTIELSQN-KYG-VVFTPELADLTPGMHGFHIHQNGSCASSEKDGKVVLGGAAG 68
Query: 67 SHFDP-HNMSHGGKEDEHRHVGDLGNLF--------GDVYGP----DSIIGRAIVIHKDQ 113
H+DP H HG + H GDL LF V P + G AI+IH
Sbjct: 69 GHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLATNPVLAPRLTLKELKGHAIMIHAGG 128
Query: 114 DD 115
D+
Sbjct: 129 DN 130
>pdb|1IBD|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant V29a
Length = 151
Score = 25.0 bits (53), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 13/65 (20%)
Query: 64 SAGSHFDP-HNMSHGGKEDEHRHVGDLGNLF--------GDVYGP----DSIIGRAIVIH 110
+AG H+DP H HG + H GDL LF V P + G AI+IH
Sbjct: 66 AAGGHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLATNPVLAPRLTLKELKGHAIMIH 125
Query: 111 KDQDD 115
D+
Sbjct: 126 AGGDN 130
>pdb|1OAL|A Chain A, Active Site Copper And Zinc Ions Modulate The Quaternary
Structure Of Prokaryotic Cu,Zn Superoxide Dismutase
Length = 151
Score = 25.0 bits (53), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 13/65 (20%)
Query: 64 SAGSHFDP-HNMSHGGKEDEHRHVGDLGNLF--------GDVYGP----DSIIGRAIVIH 110
+AG H+DP H HG + H GDL LF V P + G AI+IH
Sbjct: 66 AAGGHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLATNPVLAPRLTLKELKGHAIMIH 125
Query: 111 KDQDD 115
D+
Sbjct: 126 AGGDN 130
>pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1
pdb|1ERJ|B Chain B, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1
pdb|1ERJ|C Chain C, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1
Length = 393
Score = 25.0 bits (53), Expect = 10.0, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 2 HDNKVNAIAVITGREGGPKGSIFFSQDGD 30
H N V ++AV G GP+ ++F + GD
Sbjct: 351 HRNSVISVAVANGSSLGPEYNVFATGSGD 379
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.142 0.452
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,196,230
Number of Sequences: 62578
Number of extensions: 163773
Number of successful extensions: 393
Number of sequences better than 100.0: 102
Number of HSP's better than 100.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 220
Number of HSP's gapped (non-prelim): 102
length of query: 118
length of database: 14,973,337
effective HSP length: 81
effective length of query: 37
effective length of database: 9,904,519
effective search space: 366467203
effective search space used: 366467203
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 45 (21.9 bits)