BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047767
(666 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 339 bits (870), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 199/658 (30%), Positives = 353/658 (53%), Gaps = 16/658 (2%)
Query: 10 VRTITTLAPTCTSIVPLSSSLLLDSYCQPNPQL-NIYSSNRTIDDFVKSGHLNSAKKLFD 68
+ + TL CT+ L S+ L + + Q+ N+ S + ++ + G++ A+ FD
Sbjct: 54 IDDVHTLFRYCTN---LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFD 110
Query: 69 EMPARDMVTYNLLISGCGKFRHPKQALYLYDE-MVSHGIKESASTFSSVLSVCSNAGFYT 127
+ RD+ +NL+ISG G+ + + + + M+S G+ TF SVL C
Sbjct: 111 HIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV---I 167
Query: 128 EGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATWNLMLRAFC 187
+G +IHC L GF ++Y+ + L+ LY R A LFDE+P R++ +WN M+ +C
Sbjct: 168 DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYC 227
Query: 188 ELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNI 247
+ E L + N ++A + ++ ++ C+ + G +HS+ IK G ++ +
Sbjct: 228 QSGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHG-LESEL 282
Query: 248 FVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFFRMQLC 307
FV+N L+D Y+ G L + +K FD + V D+ISWNSI+ Y + A+ LF M+L
Sbjct: 283 FVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS 342
Query: 308 RKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIES 367
R +P + + + S+ G++ + + G+ + G+ + + +A+ MY K +++S
Sbjct: 343 RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 402
Query: 368 SVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEG-IGLDEVTLSTTLKALS 426
+ AVF P + N++++ +G +A+EM+ M +EG I ++ T + L A S
Sbjct: 403 ARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACS 462
Query: 427 VSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCF 486
+ + G LH +K+G ++ V SL D Y +CG +E + +F +IP N V +
Sbjct: 463 QAGALRQG--MKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPW 520
Query: 487 TSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKS 546
+++ + +G G +A+ + + M+ G+ PD +TF+ +L+ C+HSG+V EGQ F M++
Sbjct: 521 NTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQT 580
Query: 547 VYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHGNEIIGR 606
YGI +HY CM+DM GRAG L+ A + ++ D +W +LL +CRVHGN +G+
Sbjct: 581 DYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGK 640
Query: 607 RVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQIRETALARKLTRDIGHSLIEVNS 664
+ L E+EP + +SN Y+ G++E +IR A + L + G S +EV++
Sbjct: 641 IASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDN 698
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 337 bits (863), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 205/630 (32%), Positives = 346/630 (54%), Gaps = 15/630 (2%)
Query: 43 NIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISG---CGKFRHPKQALYLYD 99
+IY SNR +D ++K G L A LFDEMP RD V++N +ISG CGK + A L+
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL---EDAWCLFT 90
Query: 100 EMVSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMG 159
M G +FS +L ++ + G Q+H V+ G+ N+Y+GS LVD+Y +
Sbjct: 91 CMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCE 150
Query: 160 PSVRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEG-VEPNGLSFCYMV 218
A + F E+ E N +WN ++ F ++ + M+ + V + +F ++
Sbjct: 151 RVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLL 210
Query: 219 RGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIP-VDD 277
M + KQ+H+ V+KLG + I + NA++ Y+ CGS+ +AK+ FD + D
Sbjct: 211 TLLDDPMFCNLLKQVHAKVLKLG-LQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKD 269
Query: 278 VISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHG 337
+ISWNS+++ ++ ++L A ELF +MQ I ++ L+ S + FGK +HG
Sbjct: 270 LISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHG 329
Query: 338 YVTKLGFDHGSVHVQSALTDMYGK--CNVIESSVAVFESAPGRSLECCNSLMTSLLHSGN 395
V K G + +AL MY + +E ++++FES + L NS++T G
Sbjct: 330 MVIKKGLEQ-VTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGL 388
Query: 396 IKDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVS 455
+DAV+ F ++ I +D+ S L++ S A+ LG + +H A KSGF SN V
Sbjct: 389 SEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLG--QQIHALATKSGFVSNEFVI 446
Query: 456 CSLMDAYSRCGHIELSHQVFEKIPSPN-VVCFTSIMNGYSRNGMGREALDMLEVMIQRGL 514
SL+ YS+CG IE + + F++I S + V + +++ GY+++G+G+ +LD+ M + +
Sbjct: 447 SSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNV 506
Query: 515 IPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAE 574
D VTF +L C+H+G+++EG + N M+ VY I +HY+ +D+LGRAG+++KA+
Sbjct: 507 KLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAK 566
Query: 575 ELLQQTPGGGDCMMWSSLLRSCRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIG 634
EL++ P D M+ + L CR G + +VAN L+E+EP D Y +S+ YS++
Sbjct: 567 ELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLK 626
Query: 635 EFEVSMQIRETALARKLTRDIGHSLIEVNS 664
++E +++ R + + G S IE+ +
Sbjct: 627 KWEEKASVKKMMKERGVKKVPGWSWIEIRN 656
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 225/475 (47%), Gaps = 15/475 (3%)
Query: 133 HCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATWNLMLRAFCELSRP 192
HC + G ++Y+ + ++D Y++ G A LFDE+P+R+ +WN M+ + +
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 193 DEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANA 252
++ ++ MK G + +G SF +++G + D G+Q+H VIK G+ + N++V ++
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGY-ECNVYVGSS 141
Query: 253 LVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFFRMQLCRKRPS 312
LVD Y+ C + +A ++F I + +SWN+++ A + + D F+ + L + +
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALI---AGFVQVRDIKTAFWLLGLMEMKAA 198
Query: 313 IR----SFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESS 368
+ +F L KQ+H V KLG H + + +A+ Y C + +
Sbjct: 199 VTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQH-EITICNAMISSYADCGSVSDA 257
Query: 369 VAVFESAPG-RSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLKALSV 427
VF+ G + L NS++ + A E+F M + D T + L A S
Sbjct: 258 KRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSG 317
Query: 428 SASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSR--CGHIELSHQVFEKIPSPNVVC 485
G + LH IK G E + + +L+ Y + G +E + +FE + S +++
Sbjct: 318 EEHQIFG--KSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLIS 375
Query: 486 FTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMK 545
+ SI+ G+++ G+ +A+ + + D F +L C+ ++ GQ + +++
Sbjct: 376 WNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQI-HALA 434
Query: 546 SVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHG 600
+ G ++ S +I M + GI++ A + QQ + W++++ HG
Sbjct: 435 TKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHG 489
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%)
Query: 438 LLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNG 497
L HC AIK G S+I VS ++D+Y + G + ++ +F+++P + V + ++++GY+ G
Sbjct: 21 LTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCG 80
Query: 498 MGREALDMLEVMIQRGLIPDKVTFLCVLAG 527
+A + M + G D +F +L G
Sbjct: 81 KLEDAWCLFTCMKRSGSDVDGYSFSRLLKG 110
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 337 bits (863), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 197/652 (30%), Positives = 348/652 (53%), Gaps = 18/652 (2%)
Query: 8 PRVRTITTLAPTCTSIVPLSSSLLLDSYCQPNPQLNIYSSNRTIDDFVKSGHLNSAKKLF 67
P T +++ C S+ L ++ + +++ +D + K GH+ A ++F
Sbjct: 249 PDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVF 308
Query: 68 DEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVLSVCSNAGFYT 127
+P +V++ +++SG K AL ++ EM G++ + T +SV+S C
Sbjct: 309 SRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVC 368
Query: 128 EGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGP---SVRALDLFDELPERNLATWNLMLR 184
E Q+H V GF L+ + + L+ +Y + G S + + D++ +N+ N+M+
Sbjct: 369 EASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMIT 426
Query: 185 AFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVD 244
+F + +P + +R++ +M EG+ + S C ++ S+ L+ GKQ+H + +K G V
Sbjct: 427 SFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSGLV- 482
Query: 245 VNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFFRM 304
+++ V ++L YS CGSL E+ K F IP D W S++S + +Y + +A+ LF M
Sbjct: 483 LDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEM 542
Query: 305 QLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNV 364
P + L S ++ GK+IHGY + G D G + + SAL +MY KC
Sbjct: 543 LDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKG-MDLGSALVNMYSKCGS 601
Query: 365 IESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLKA 424
++ + V++ P C+SL++ G I+D +F MV G +D +S+ LKA
Sbjct: 602 LKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKA 661
Query: 425 LSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVV 484
++S ++LG+ +H K G + +V SL+ YS+ G I+ + F +I P+++
Sbjct: 662 AALSDESSLGA--QVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLI 719
Query: 485 CFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSM 544
+T+++ Y+++G EAL + +M ++G PDKVTF+ VL+ C+H G+V+E NSM
Sbjct: 720 AWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSM 779
Query: 545 KSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHGNEII 604
YGI+ + +HY CM+D LGR+G L +AE + D ++W +LL +C++HG +
Sbjct: 780 VKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVEL 839
Query: 605 GRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQIRETALARKLTRDIG 656
G+ A +ELEP D Y +SN +E+GE++ ++ ET RKL + G
Sbjct: 840 GKVAAKKAIELEPSDAGAYISLSNILAEVGEWD---EVEET---RKLMKGTG 885
Score = 207 bits (528), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 159/574 (27%), Positives = 279/574 (48%), Gaps = 20/574 (3%)
Query: 31 LLDSYCQPNPQLNIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRH 90
LL Y P +++ + + + SG + A KLFD +P D+V+ N++ISG + R
Sbjct: 74 LLRRYLLP---FDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRL 130
Query: 91 PKQALYLYDEMVSHGIKESASTFSSVLSVCS--NAGFYTEGIQIHCRVLSLGFGLNLYIG 148
+++L + +M G + + ++ SV+S CS A ++E + C + +G+ +
Sbjct: 131 FEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSE--LVCCHTIKMGYFFYEVVE 188
Query: 149 SPLVDLYMRMGPSVRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVE 208
S L+D++ + A +F + N+ WN ++ V ++++M +
Sbjct: 189 SALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQK 248
Query: 209 PNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKK 268
P+ ++ ++ C+ L GK + + VIK G DV FV A+VD Y+ CG + EA +
Sbjct: 249 PDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDV--FVCTAIVDLYAKCGHMAEAME 306
Query: 269 SFDFIPVDDVISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGN 328
F IP V+SW ++S Y + F ALE+F M+ + + ++ R
Sbjct: 307 VFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSM 366
Query: 329 VYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPG-RSLECCNSLM 387
V Q+H +V K GF S V +AL MY K I+ S VFE + N ++
Sbjct: 367 VCEASQVHAWVFKSGFYLDS-SVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMI 425
Query: 388 TSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSG 447
TS S A+ +F M+ EG+ DE ++ + L L NLG + +H +KSG
Sbjct: 426 TSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDC---LNLG--KQVHGYTLKSG 480
Query: 448 FESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLE 507
++ V SL YS+CG +E S+++F+ IP + C+ S+++G++ G REA+ +
Sbjct: 481 LVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFS 540
Query: 508 VMIQRGLIPDKVTFLCVLAGC-NHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGR 566
M+ G PD+ T VL C +H + + ++ ++++ GID S +++M +
Sbjct: 541 EMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRA--GIDKGMDLGSALVNMYSK 598
Query: 567 AGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHG 600
G L A ++ + P D + SSL+ HG
Sbjct: 599 CGSLKLARQVYDRLP-ELDPVSCSSLISGYSQHG 631
Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 176/356 (49%), Gaps = 13/356 (3%)
Query: 227 LDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVS 286
L K L +H+++ + ++F+ +L+ +YS GS+ +A K FD IP DV+S N ++S
Sbjct: 64 LRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMIS 123
Query: 287 IYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDH 346
Y + L ++L F +M + S+ ++ S F + + + K+G+
Sbjct: 124 GYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFF 183
Query: 347 GSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFM 406
V V+SAL D++ K E + VF + ++ C N+++ L + N ++F M
Sbjct: 184 YEV-VESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEM 242
Query: 407 VDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCG 466
D T S+ L A + G +++ IK G E ++ V +++D Y++CG
Sbjct: 243 CVGFQKPDSYTYSSVLAACASLEKLRFG--KVVQARVIKCGAE-DVFVCTAIVDLYAKCG 299
Query: 467 HIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLA 526
H+ + +VF +IP+P+VV +T +++GY+++ AL++ + M G+ + T V++
Sbjct: 300 HMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVIS 359
Query: 527 GCNHSGMVKEGQ----LVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQ 578
C MV E VF S G D + +I M ++G +D +E++ +
Sbjct: 360 ACGRPSMVCEASQVHAWVFKS-----GFYLDSSVAAALISMYSKSGDIDLSEQVFE 410
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 335 bits (860), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 200/625 (32%), Positives = 327/625 (52%), Gaps = 5/625 (0%)
Query: 43 NIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMV 102
+ Y N + + G+L SA+ +F M RD VTYN LI+G + + ++A+ L+ M
Sbjct: 322 DTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH 381
Query: 103 SHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSV 162
G++ ++T +S++ CS G G Q+H LGF N I L++LY +
Sbjct: 382 LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIE 441
Query: 163 RALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCS 222
ALD F E N+ WN+ML A+ L R++ +M+ E + PN ++ +++ C
Sbjct: 442 TALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCI 501
Query: 223 IGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWN 282
L+ G+Q+HS +IK + +N +V + L+D Y+ G L A DV+SW
Sbjct: 502 RLGDLELGEQIHSQIIKTNF-QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWT 560
Query: 283 SIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKL 342
++++ Y Y+ AL F +M R ++ + + G+QIH
Sbjct: 561 TMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS 620
Query: 343 GFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEM 402
GF + Q+AL +Y +C IE S FE N+L++ SGN ++A+ +
Sbjct: 621 GFS-SDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRV 679
Query: 403 FGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAY 462
F M EGI + T + +KA S +AN+ + +H K+G++S V +L+ Y
Sbjct: 680 FVRMNREGIDNNNFTFGSAVKA--ASETANMKQGKQVHAVITKTGYDSETEVCNALISMY 737
Query: 463 SRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFL 522
++CG I + + F ++ + N V + +I+N YS++G G EALD + MI + P+ VT +
Sbjct: 738 AKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLV 797
Query: 523 CVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPG 582
VL+ C+H G+V +G F SM S YG+ +HY C++DML RAG+L +A+E +Q+ P
Sbjct: 798 GVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPI 857
Query: 583 GGDCMMWSSLLRSCRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQI 642
D ++W +LL +C VH N IG A+ L+ELEP D A Y +SN Y+ +++
Sbjct: 858 KPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLT 917
Query: 643 RETALARKLTRDIGHSLIEV-NSCH 666
R+ + + ++ G S IEV NS H
Sbjct: 918 RQKMKEKGVKKEPGQSWIEVKNSIH 942
Score = 230 bits (586), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 151/573 (26%), Positives = 287/573 (50%), Gaps = 21/573 (3%)
Query: 31 LLDSYCQPNPQLNIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRH 90
L DS NP +++YS N G ++ A+++FD + +D ++ +ISG K
Sbjct: 218 LRDSTVVCNPLIDLYSRN---------GFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 268
Query: 91 PKQALYLYDEMVSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSP 150
+A+ L+ +M GI + FSSVLS C G Q+H VL LGF + Y+ +
Sbjct: 269 EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 328
Query: 151 LVDLYMRMGPSVRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPN 210
LV LY +G + A +F + +R+ T+N ++ + ++ + ++ +M +G+EP+
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388
Query: 211 GLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSF 270
+ +V CS L G+QLH++ KLG+ N + AL++ Y+ C + A F
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNK-IEGALLNLYAKCADIETALDYF 447
Query: 271 DFIPVDDVISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVY 330
V++V+ WN ++ Y D + ++ +F +MQ+ P+ ++ L R G++
Sbjct: 448 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Query: 331 FGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSL 390
G+QIH + K F + +V S L DMY K ++++ + G+ + +++
Sbjct: 508 LGEQIHSQIIKTNFQLNA-YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGY 566
Query: 391 LHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCR---LLHCCAIKSG 447
A+ F M+D GI DEV L+ +VSA A L + + +H A SG
Sbjct: 567 TQYNFDDKALTTFRQMLDRGIRSDEVGLTN-----AVSACAGLQALKEGQQIHAQACVSG 621
Query: 448 FESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLE 507
F S++ +L+ YSRCG IE S+ FE+ + + + + ++++G+ ++G EAL +
Sbjct: 622 FSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFV 681
Query: 508 VMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRA 567
M + G+ + TF + + + +K+G+ V +++ + G D++ + + +I M +
Sbjct: 682 RMNREGIDNNNFTFGSAVKAASETANMKQGKQV-HAVITKTGYDSETEVCNALISMYAKC 740
Query: 568 GILDKAEELLQQTPGGGDCMMWSSLLRSCRVHG 600
G + AE+ + + + W++++ + HG
Sbjct: 741 GSISDAEKQFLEVSTKNE-VSWNAIINAYSKHG 772
Score = 222 bits (566), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 155/574 (27%), Positives = 278/574 (48%), Gaps = 8/574 (1%)
Query: 47 SNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGI 106
S + D ++ G L A K+FDEMP R + T+N +I + L+ MVS +
Sbjct: 123 SEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENV 182
Query: 107 KESASTFSSVLSVCSNAGFYTEGI-QIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRAL 165
+ TFS VL C + + QIH R+L G + + +PL+DLY R G A
Sbjct: 183 TPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLAR 242
Query: 166 DLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGM 225
+FD L ++ ++W M+ + E +R++ M G+ P +F ++ C
Sbjct: 243 RVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE 302
Query: 226 LLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIV 285
L+ G+QLH V+KLG+ + +V NALV Y G+LI A+ F + D +++N+++
Sbjct: 303 SLEIGEQLHGLVLKLGF-SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLI 361
Query: 286 SIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFD 345
+ + A+ELF RM L P + + S G ++ G+Q+H Y TKLGF
Sbjct: 362 NGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFA 421
Query: 346 HGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGF 405
+ ++ AL ++Y KC IE+++ F ++ N ++ + +++++ +F
Sbjct: 422 SNN-KIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQ 480
Query: 406 MVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRC 465
M E I ++ T + LK LG +H IK+ F+ N V L+D Y++
Sbjct: 481 MQIEEIVPNQYTYPSILKTCIRLGDLELG--EQIHSQIIKTNFQLNAYVCSVLIDMYAKL 538
Query: 466 GHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVL 525
G ++ + + + +VV +T+++ GY++ +AL M+ RG+ D+V +
Sbjct: 539 GKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAV 598
Query: 526 AGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGD 585
+ C +KEGQ + ++ V G +D + ++ + R G ++++ +QT GD
Sbjct: 599 SACAGLQALKEGQQI-HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE-AGD 656
Query: 586 CMMWSSLLRSCRVHGNEIIGRRVANILMELEPVD 619
+ W++L+ + GN RV + M E +D
Sbjct: 657 NIAWNALVSGFQQSGNNEEALRVF-VRMNREGID 689
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 143/538 (26%), Positives = 260/538 (48%), Gaps = 26/538 (4%)
Query: 73 RDMVTYNLLISGCGKFRHPKQALYLY------------DEMVSHGIKESASTFSSVLSVC 120
R + T + + CG R A+ +Y D + + GI+ + T +L C
Sbjct: 35 RKLKTRTVFPTLCGTRRASFAAISVYISEDESFQEKRIDSVENRGIRPNHQTLKWLLEGC 94
Query: 121 -SNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATW 179
G EG ++H ++L LG N + L D Y+ G A +FDE+PER + TW
Sbjct: 95 LKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTW 154
Query: 180 NLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIG-MLLDEGKQLHSHVI 238
N M++ + EV ++ +M +E V PN +F ++ C G + D +Q+H+ ++
Sbjct: 155 NKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIL 214
Query: 239 KLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDAL 298
G D + V N L+D YS G + A++ FD + + D SW +++S + + +A+
Sbjct: 215 YQGLRDSTV-VCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAI 273
Query: 299 ELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDM 358
LF M + P+ +F L+ + ++ G+Q+HG V KLGF +V +AL +
Sbjct: 274 RLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS-SDTYVCNALVSL 332
Query: 359 YGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTL 418
Y + S+ +F + R N+L+ L G + A+E+F M +G+ D TL
Sbjct: 333 YFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTL 392
Query: 419 STTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKI 478
++ + ++ SA L + LH K GF SN + +L++ Y++C IE + F +
Sbjct: 393 ASLV--VACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET 450
Query: 479 PSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQ 538
NVV + ++ Y R + + M ++P++ T+ +L C G ++ G+
Sbjct: 451 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 510
Query: 539 LVFNS-MKSVYGIDADRQHYSC--MIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLL 593
+ + +K+ + ++A Y C +IDM + G LD A ++L + G D + W++++
Sbjct: 511 QIHSQIIKTNFQLNA----YVCSVLIDMYAKLGKLDTAWDILIRF-AGKDVVSWTTMI 563
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 332 bits (850), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 186/627 (29%), Positives = 338/627 (53%), Gaps = 14/627 (2%)
Query: 43 NIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMV 102
++Y ID ++K G+++ A+ +FD +P + VT+ +ISGC K +L L+ +++
Sbjct: 182 DVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM 241
Query: 103 SHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSV 162
+ S+VLS CS F G QIH +L G ++ + + L+D Y++ G +
Sbjct: 242 EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVI 301
Query: 163 RALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCS 222
A LF+ +P +N+ +W +L + + + E + ++ M G++P+ + ++ C+
Sbjct: 302 AAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361
Query: 223 IGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWN 282
L G Q+H++ IK + + +V N+L+D Y+ C L +A+K FD DV+ +N
Sbjct: 362 SLHALGFGTQVHAYTIKAN-LGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFN 420
Query: 283 SIVSIYADYDL---IFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYV 339
+++ Y+ + +AL +F M+ RPS+ +FV L ++ ++ KQIHG +
Sbjct: 421 AMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLM 480
Query: 340 TKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDA 399
K G + + SAL D+Y C ++ S VF+ + L NS+ + ++A
Sbjct: 481 FKYGLNL-DIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEA 539
Query: 400 VEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRL---LHCCAIKSGFESNIAVSC 456
+ +F + DE T + V+A+ NL S +L HC +K G E N ++
Sbjct: 540 LNLFLELQLSRERPDEFTFANM-----VTAAGNLASVQLGQEFHCQLLKRGLECNPYITN 594
Query: 457 SLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIP 516
+L+D Y++CG E +H+ F+ S +VVC+ S+++ Y+ +G G++AL MLE M+ G+ P
Sbjct: 595 ALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEP 654
Query: 517 DKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEEL 576
+ +TF+ VL+ C+H+G+V++G F M +GI+ + +HY CM+ +LGRAG L+KA EL
Sbjct: 655 NYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKAREL 713
Query: 577 LQQTPGGGDCMMWSSLLRSCRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIGEF 636
+++ P ++W SLL C GN + A + + +P D ++ +SN Y+ G +
Sbjct: 714 IEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMW 773
Query: 637 EVSMQIRETALARKLTRDIGHSLIEVN 663
+ ++RE + ++ G S I +N
Sbjct: 774 TEAKKVRERMKVEGVVKEPGRSWIGIN 800
Score = 217 bits (552), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 154/583 (26%), Positives = 294/583 (50%), Gaps = 19/583 (3%)
Query: 41 QLNIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDE 100
+L+ Y SN I+ + ++G + A+K+F++MP R++V+++ ++S C +++L ++ E
Sbjct: 76 ELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLE 135
Query: 101 MVSHGIKESASTF--SSVLSVCSNAGFYTEG----IQIHCRVLSLGFGLNLYIGSPLVDL 154
K+S + + SS + CS G G Q+ ++ GF ++Y+G+ L+D
Sbjct: 136 FW-RTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDF 192
Query: 155 YMRMGPSVRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSF 214
Y++ G A +FD LPE++ TW M+ ++ R L+++ ++ + V P+G
Sbjct: 193 YLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYIL 252
Query: 215 CYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIP 274
++ CSI L+ GKQ+H+H+++ G ++++ + N L+D Y CG +I A K F+ +P
Sbjct: 253 STVLSACSILPFLEGGKQIHAHILRYG-LEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP 311
Query: 275 VDDVISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQ 334
++ISW +++S Y L +A+ELF M +P + + L + + FG Q
Sbjct: 312 NKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQ 371
Query: 335 IHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSG 394
+H Y K + S +V ++L DMY KC+ + + VF+ + N+++ G
Sbjct: 372 VHAYTIKANLGNDS-YVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLG 430
Query: 395 NIKDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSAS-ANLGSCRLLHCCAIKSGFESNIA 453
+ E D L +L T + L SAS +LG + +H K G +I
Sbjct: 431 TQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIF 490
Query: 454 VSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDM-LEVMIQR 512
+L+D YS C ++ S VF+++ ++V + S+ GY + EAL++ LE+ + R
Sbjct: 491 AGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSR 550
Query: 513 GLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDK 572
PD+ TF ++ + V+ GQ F+ G++ + + ++DM + G +
Sbjct: 551 ER-PDEFTFANMVTAAGNLASVQLGQ-EFHCQLLKRGLECNPYITNALLDMYAKCGSPED 608
Query: 573 AEELLQQTPGGGDCMMWSSLLRSCRVHGNEIIGRRVANILMEL 615
A + + D + W+S++ S HG G++ +L ++
Sbjct: 609 AHKAF-DSAASRDVVCWNSVISSYANHGE---GKKALQMLEKM 647
Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 129/512 (25%), Positives = 246/512 (48%), Gaps = 30/512 (5%)
Query: 132 IHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATWNLMLRAFCELSR 191
+H +++ G L+ Y+ + L++LY R G V A +F+++PERNL +W+ M+ A
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 192 PDEVLRMYNKM-KAEGVEPNGLSFCYMVRGCSIGMLLDEGK----QLHSHVIKLGWVDVN 246
+E L ++ + + PN ++ CS L G+ QL S ++K G+ D +
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKSGF-DRD 182
Query: 247 IFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFFRMQL 306
++V L+DFY G++ A+ FD +P ++W +++S + +L+LF+++
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME 242
Query: 307 CRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIE 366
P L+ S + GKQIH ++ + G + + + + L D Y KC +
Sbjct: 243 DNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDA-SLMNVLIDSYVKCGRVI 301
Query: 367 SSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLKALS 426
++ +F P +++ +L++ + K+A+E+F M G+ D S+ L S
Sbjct: 302 AAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILT--S 359
Query: 427 VSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCF 486
++ LG +H IK+ ++ V+ SL+D Y++C + + +VF+ + +VV F
Sbjct: 360 CASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLF 419
Query: 487 TSIMNGYSRNGMG---REALDMLEVMIQRGLIPDKVTFLCVL---AGCNHSGMVKEGQLV 540
+++ GYSR G EAL++ M R + P +TF+ +L A G+ K+
Sbjct: 420 NAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQ---- 475
Query: 541 FNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHG 600
+ + YG++ D S +ID+ L K L+ D ++W+S+ + V
Sbjct: 476 IHGLMFKYGLNLDIFAGSALIDVYSNCYCL-KDSRLVFDEMKVKDLVIWNSMF-AGYVQQ 533
Query: 601 NEIIGRRVANILMELE-----PVDFAVYSQVS 627
+E N+ +EL+ P +F + V+
Sbjct: 534 SE--NEEALNLFLELQLSRERPDEFTFANMVT 563
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 124/246 (50%), Gaps = 2/246 (0%)
Query: 42 LNIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEM 101
L+I++ + ID + L ++ +FDEM +D+V +N + +G + ++AL L+ E+
Sbjct: 487 LDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLEL 546
Query: 102 VSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPS 161
+ TF+++++ N G + HC++L G N YI + L+D+Y + G
Sbjct: 547 QLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSP 606
Query: 162 VRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGC 221
A FD R++ WN ++ ++ + L+M KM +EG+EPN ++F ++ C
Sbjct: 607 EDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSAC 666
Query: 222 SIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDD-VIS 280
S L+++G + +++ G ++ +V G L +A++ + +P I
Sbjct: 667 SHAGLVEDGLKQFELMLRFG-IEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIV 725
Query: 281 WNSIVS 286
W S++S
Sbjct: 726 WRSLLS 731
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 87/181 (48%), Gaps = 7/181 (3%)
Query: 438 LLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNG 497
++H I G E + +S L++ YSR G + + +VFEK+P N+V ++++++ + +G
Sbjct: 65 VVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHG 124
Query: 498 MGREALDM-LEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVY---GIDAD 553
+ E+L + LE R P++ + C SG+ G+ + ++S G D D
Sbjct: 125 IYEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGRWMVFQLQSFLVKSGFDRD 182
Query: 554 RQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHGNEIIGRRVANILM 613
+ +ID + G +D A + P + W++++ C G + ++ LM
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALPEKS-TVTWTTMISGCVKMGRSYVSLQLFYQLM 241
Query: 614 E 614
E
Sbjct: 242 E 242
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 327 bits (838), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 195/631 (30%), Positives = 335/631 (53%), Gaps = 13/631 (2%)
Query: 40 PQLNIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYD 99
P N S+N I VK+G ++SA+ LFD MP R +VT+ +L+ + H +A L+
Sbjct: 75 PHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFR 134
Query: 100 EMV--SHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMR 157
+M S TF+++L C++A Q+H + LGF N ++ + ++ ++
Sbjct: 135 QMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFL--TVSNVLLK 192
Query: 158 MGPSVRALDL----FDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLS 213
VR LDL F+E+PE++ T+N ++ + + E + ++ KM+ G +P+ +
Sbjct: 193 SYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFT 252
Query: 214 FCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFI 273
F +++ G+QLH+ + G+ + V N ++DFYS ++E + FD +
Sbjct: 253 FSGVLKAVVGLHDFALGQQLHALSVTTGF-SRDASVGNQILDFYSKHDRVLETRMLFDEM 311
Query: 274 PVDDVISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGK 333
P D +S+N ++S Y+ D +L F MQ F L+ A+ ++ G+
Sbjct: 312 PELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGR 371
Query: 334 QIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHS 393
Q+H L +HV ++L DMY KC + E + +F+S P R+ +L++ +
Sbjct: 372 QLHCQAL-LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQK 430
Query: 394 GNIKDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIA 453
G +++F M + D+ T +T LKA + AS LG + LH I+SG N+
Sbjct: 431 GLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLG--KQLHAFIIRSGNLENVF 488
Query: 454 VSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRG 513
L+D Y++CG I+ + QVFE++P N V + ++++ ++ NG G A+ MI+ G
Sbjct: 489 SGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESG 548
Query: 514 LIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKA 573
L PD V+ L VL C+H G V++G F +M +YGI ++HY+CM+D+LGR G +A
Sbjct: 549 LQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEA 608
Query: 574 EELLQQTPGGGDCMMWSSLLRSCRVHGNEIIGRRVANILMELEPV-DFAVYSQVSNFYSE 632
E+L+ + P D +MWSS+L +CR+H N+ + R A L +E + D A Y +SN Y+
Sbjct: 609 EKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAA 668
Query: 633 IGEFEVSMQIRETALARKLTRDIGHSLIEVN 663
GE+E +++ R + + +S +EVN
Sbjct: 669 AGEWEKVRDVKKAMRERGIKKVPAYSWVEVN 699
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/504 (26%), Positives = 242/504 (48%), Gaps = 35/504 (6%)
Query: 7 LPRVRTITTLAPTCTSIVPLSSSLLLDSYC-----QPNPQLNIYSSNRTIDDFVKSGHLN 61
LP T TTL P C VP ++ + ++ NP L + SN + + + L+
Sbjct: 144 LPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTV--SNVLLKSYCEVRRLD 201
Query: 62 SAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVLSVCS 121
A LF+E+P +D VT+N LI+G K ++++L+ +M G + S TFS VL
Sbjct: 202 LACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV 261
Query: 122 NAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATWNL 181
+ G Q+H ++ GF + +G+ ++D Y + + LFDE+PE + ++N+
Sbjct: 262 GLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNV 321
Query: 182 MLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLG 241
++ ++ + + + L + +M+ G + F M+ + L G+QLH + L
Sbjct: 322 VISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL-LA 380
Query: 242 WVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELF 301
D + V N+LVD Y+ C EA+ F +P +SW +++S Y L L+LF
Sbjct: 381 TADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLF 440
Query: 302 FRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGK 361
+M+ R +F L ++ ++ GKQ+H ++ + G + +V S L DMY K
Sbjct: 441 TKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSG-NLENVFSGSGLVDMYAK 499
Query: 362 CNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTT 421
C I+ +V VFE P R+ N+L+++ +G+ + A+ F M++ G+ D V++
Sbjct: 500 CGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGV 559
Query: 422 LKALSVSASANLGSCRLLHCCAIKSGFESNIAVS------------CSLMDAYSRCGHIE 469
L A S HC ++ G E A+S ++D R G
Sbjct: 560 LTACS-------------HCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFA 606
Query: 470 LSHQVFEKIP-SPNVVCFTSIMNG 492
+ ++ +++P P+ + ++S++N
Sbjct: 607 EAEKLMDEMPFEPDEIMWSSVLNA 630
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 59/142 (41%), Gaps = 33/142 (23%)
Query: 421 TLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPS 480
TL+ L + A R + IK+GF+++ S +++ R G + + +V++++P
Sbjct: 17 TLRQLRQPSPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPH 76
Query: 481 PNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLI------------------------- 515
N V ++++G+ + G A D+ + M R ++
Sbjct: 77 KNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQM 136
Query: 516 --------PDKVTFLCVLAGCN 529
PD VTF +L GCN
Sbjct: 137 CRSSSCTLPDHVTFTTLLPGCN 158
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 320 bits (821), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 191/660 (28%), Positives = 353/660 (53%), Gaps = 6/660 (0%)
Query: 4 TKLLPRVRTITTLAPTCTSIVPLS-SSLLLDSYCQPNPQLNIYSSNRTIDDFVKSGHLNS 62
+K+ P T ++ C + L+ + + +++ N +D + + G L
Sbjct: 100 SKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTR 159
Query: 63 AKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVLSVCSN 122
A+++FDEMP RD+V++N LISG + ++AL +Y E+ + I + T SSVL N
Sbjct: 160 ARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGN 219
Query: 123 AGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATWNLM 182
+G +H L G + + + LV +Y++ A +FDE+ R+ ++N M
Sbjct: 220 LLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTM 279
Query: 183 LRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGW 242
+ + +L +E +RM+ + + +P+ L+ ++R C L K ++++++K G+
Sbjct: 280 ICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGF 338
Query: 243 VDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFF 302
V + V N L+D Y+ CG +I A+ F+ + D +SWNSI+S Y + +A++LF
Sbjct: 339 V-LESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFK 397
Query: 303 RMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKC 362
M + ++ +++ ++ ++R ++ FGK +H K G + V +AL DMY KC
Sbjct: 398 MMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGI-CIDLSVSNALIDMYAKC 456
Query: 363 NVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTL 422
+ S+ +F S N+++++ + G+ +++ M + D T TL
Sbjct: 457 GEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTL 516
Query: 423 KALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPN 482
+ A+ LG + +HCC ++ G+ES + + +L++ YS+CG +E S +VFE++ +
Sbjct: 517 PMCASLAAKRLG--KEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRD 574
Query: 483 VVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFN 542
VV +T ++ Y G G +AL+ M + G++PD V F+ ++ C+HSG+V EG F
Sbjct: 575 VVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFE 634
Query: 543 SMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHGNE 602
MK+ Y ID +HY+C++D+L R+ + KAEE +Q P D +W+S+LR+CR G+
Sbjct: 635 KMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDM 694
Query: 603 IIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQIRETALARKLTRDIGHSLIEV 662
RV+ ++EL P D SN Y+ + +++ IR++ + +T++ G+S IEV
Sbjct: 695 ETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEV 754
Score = 186 bits (472), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 139/574 (24%), Positives = 287/574 (50%), Gaps = 13/574 (2%)
Query: 45 YSSNRTIDDFVKSGHLNSAKKLFDEM-PARDMVTYNLLISGCGKFRHPKQALYLYDEMVS 103
+ S + ID + S+ +F + PA+++ +N +I K +AL Y ++
Sbjct: 40 FFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRE 99
Query: 104 HGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVR 163
+ TF SV+ C+ G ++ ++L +GF +L++G+ LVD+Y RMG R
Sbjct: 100 SKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTR 159
Query: 164 ALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSI 223
A +FDE+P R+L +WN ++ + +E L +Y+++K + P+ + ++
Sbjct: 160 ARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGN 219
Query: 224 GMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNS 283
+++ +G+ LH +K G V+ + V N LV Y +A++ FD + V D +S+N+
Sbjct: 220 LLVVKQGQGLHGFALKSG-VNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNT 278
Query: 284 IVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLG 343
++ Y +++ +++ +F L + +P + + L ++ K I+ Y+ K G
Sbjct: 279 MICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAG 337
Query: 344 FDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMF 403
F S V++ L D+Y KC + ++ VF S + NS+++ + SG++ +A+++F
Sbjct: 338 FVLEST-VRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLF 396
Query: 404 GFMVDEGIGLDEVTLSTTLKALSVSAS-ANLGSCRLLHCCAIKSGFESNIAVSCSLMDAY 462
M+ I ++ T L +SVS A+L + LH IKSG +++VS +L+D Y
Sbjct: 397 KMMM---IMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMY 453
Query: 463 SRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFL 522
++CG + S ++F + + + V + ++++ R G L + M + ++PD TFL
Sbjct: 454 AKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFL 513
Query: 523 CVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPG 582
L C + G+ + + +G +++ Q + +I+M + G L+ + + ++
Sbjct: 514 VTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGNALIEMYSKCGCLENSSRVFERM-S 571
Query: 583 GGDCMMWSSLLRSCRVHGNEIIGRRVANILMELE 616
D + W+ ++ + ++G G + ++E
Sbjct: 572 RRDVVTWTGMIYAYGMYGE---GEKALETFADME 602
Score = 166 bits (420), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 138/518 (26%), Positives = 254/518 (49%), Gaps = 14/518 (2%)
Query: 109 SASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLF 168
S+ S LS SN E +IH V+SLG + + L+D Y +L +F
Sbjct: 6 SSPFISRALSSSSN---LNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVF 62
Query: 169 DEL-PERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLL 227
+ P +N+ WN ++RAF + E L Y K++ V P+ +F +++ C+
Sbjct: 63 RRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDA 122
Query: 228 DEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSI 287
+ G ++ ++ +G+ + ++FV NALVD YS G L A++ FD +PV D++SWNS++S
Sbjct: 123 EMGDLVYEQILDMGF-ESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISG 181
Query: 288 YADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHG 347
Y+ + +ALE++ ++ P + L V G+ +HG+ K G +
Sbjct: 182 YSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGV-NS 240
Query: 348 SVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMV 407
V V + L MY K + VF+ R N+++ L ++++V MF +
Sbjct: 241 VVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL 300
Query: 408 DEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGH 467
D+ D +T+S+ L+A +L + ++ +K+GF V L+D Y++CG
Sbjct: 301 DQ-FKPDLLTVSSVLRA--CGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGD 357
Query: 468 IELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAG 527
+ + VF + + V + SI++GY ++G EA+ + ++M+ D +T+L +++
Sbjct: 358 MITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISV 417
Query: 528 CNHSGMVKEGQ-LVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDC 586
+K G+ L N +KS GI D + +IDM + G + + ++ G GD
Sbjct: 418 STRLADLKFGKGLHSNGIKS--GICIDLSVSNALIDMYAKCGEVGDSLKIFSSM-GTGDT 474
Query: 587 MMWSSLLRSCRVHGNEIIGRRVANILMELEPV-DFAVY 623
+ W++++ +C G+ G +V + + E V D A +
Sbjct: 475 VTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATF 512
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 96/187 (51%), Gaps = 3/187 (1%)
Query: 415 EVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQV 474
+ +S+ + ++S+S+NL R +H I G +S+ S L+D YS S V
Sbjct: 2 QTRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSV 61
Query: 475 FEKI-PSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGM 533
F ++ P+ NV + SI+ +S+NG+ EAL+ + + + PDK TF V+ C
Sbjct: 62 FRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFD 121
Query: 534 VKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLL 593
+ G LV+ + + G ++D + ++DM R G+L +A ++ + P D + W+SL+
Sbjct: 122 AEMGDLVYEQILDM-GFESDLFVGNALVDMYSRMGLLTRARQVFDEMP-VRDLVSWNSLI 179
Query: 594 RSCRVHG 600
HG
Sbjct: 180 SGYSSHG 186
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 318 bits (814), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 195/610 (31%), Positives = 328/610 (53%), Gaps = 9/610 (1%)
Query: 62 SAKKLFDEMPAR-DMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESAS-TFSSVLSV 119
SA+ +F+ R D+ +N L+SG K L ++ +++ I S TF +V+
Sbjct: 57 SARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKA 116
Query: 120 CSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATW 179
G G IH V+ G+ ++ + S LV +Y + +L +FDE+PER++A+W
Sbjct: 117 YGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASW 176
Query: 180 NLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIK 239
N ++ F + ++ L ++ +M++ G EPN +S + CS + L+ GK++H +K
Sbjct: 177 NTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVK 236
Query: 240 LGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALE 299
G+ +++ +V +ALVD Y C L A++ F +P +++WNS++ Y +E
Sbjct: 237 KGF-ELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVE 295
Query: 300 LFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMY 359
+ RM + RPS + L SR+ N+ GK IHGYV + + ++V +L D+Y
Sbjct: 296 ILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIR-SVVNADIYVNCSLIDLY 354
Query: 360 GKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLS 419
KC + VF E N +++S + GN AVE++ MV G+ D VT +
Sbjct: 355 FKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFT 414
Query: 420 TTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIP 479
+ L A S A+ G + +H +S E++ + +L+D YS+CG+ + + ++F IP
Sbjct: 415 SVLPACSQLAALEKG--KQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP 472
Query: 480 SPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQL 539
+VV +T +++ Y +G REAL + M + GL PD VT L VL+ C H+G++ EG
Sbjct: 473 KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLK 532
Query: 540 VFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGD-CMMWSSLLRSCRV 598
F+ M+S YGI+ +HYSCMID+LGRAG L +A E++QQTP D + S+L +C +
Sbjct: 533 FFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCL 592
Query: 599 HGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQIRETALARKLTRDIGHS 658
H +G R+A +L+E P D + Y + N Y+ ++ + ++R L + G S
Sbjct: 593 HLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCS 652
Query: 659 LIEVNS--CH 666
IE++ CH
Sbjct: 653 WIEMSDKVCH 662
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 138/497 (27%), Positives = 252/497 (50%), Gaps = 13/497 (2%)
Query: 110 ASTFSSVLSVCSNAGFYTEGIQ-IHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLF 168
+S S+L C+N+ I+ +H R+L+LG ++ + L+++Y A +F
Sbjct: 3 SSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVF 62
Query: 169 DELPER-NLATWNLMLRAFCELSRPDEVLRMYNKMKAEGV-EPNGLSFCYMVRGCSIGML 226
+ R ++ WN ++ + + S + L ++ ++ + P+ +F +++ + G L
Sbjct: 63 ENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIK--AYGAL 120
Query: 227 LDE--GKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSI 284
E G+ +H+ V+K G+V ++ VA++LV Y+ + + FD +P DV SWN++
Sbjct: 121 GREFLGRMIHTLVVKSGYV-CDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTV 179
Query: 285 VSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGF 344
+S + ALELF RM+ P+ S ++ SR + GK+IH K GF
Sbjct: 180 ISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGF 239
Query: 345 DHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFG 404
+ +V SAL DMYGKC+ +E + VF+ P +SL NS++ + G+ K VE+
Sbjct: 240 ELDE-YVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILN 298
Query: 405 FMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSR 464
M+ EG + TL++ L ++ S S NL + +H I+S ++I V+CSL+D Y +
Sbjct: 299 RMIIEGTRPSQTTLTSIL--MACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFK 356
Query: 465 CGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCV 524
CG L+ VF K + +++ Y G +A+++ + M+ G+ PD VTF V
Sbjct: 357 CGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSV 416
Query: 525 LAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGG 584
L C+ +++G+ + S+ S ++ D S ++DM + G +A + P
Sbjct: 417 LPACSQLAALEKGKQIHLSI-SESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KK 474
Query: 585 DCMMWSSLLRSCRVHGN 601
D + W+ ++ + HG
Sbjct: 475 DVVSWTVMISAYGSHGQ 491
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 206/426 (48%), Gaps = 3/426 (0%)
Query: 54 FVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTF 113
+ K ++ ++FDEMP RD+ ++N +IS + ++AL L+ M S G + ++ +
Sbjct: 152 YAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSL 211
Query: 114 SSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPE 173
+ +S CS + G +IH + + GF L+ Y+ S LVD+Y + A ++F ++P
Sbjct: 212 TVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPR 271
Query: 174 RNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQL 233
++L WN M++ + + + N+M EG P+ + ++ CS L GK +
Sbjct: 272 KSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFI 331
Query: 234 HSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDL 293
H +VI+ V+ +I+V +L+D Y CG A+ F D SWN ++S Y
Sbjct: 332 HGYVIR-SVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGN 390
Query: 294 IFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQS 353
F A+E++ +M +P + +F L S+ + GKQIH +++ + + + S
Sbjct: 391 WFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDEL-LLS 449
Query: 354 ALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGL 413
AL DMY KC + + +F S P + + ++++ G ++A+ F M G+
Sbjct: 450 ALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKP 509
Query: 414 DEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQ 473
D VTL L A + + G + K G E I ++D R G + +++
Sbjct: 510 DGVTLLAVLSACGHAGLIDEG-LKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYE 568
Query: 474 VFEKIP 479
+ ++ P
Sbjct: 569 IIQQTP 574
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 186/381 (48%), Gaps = 4/381 (1%)
Query: 1 MLSTKLLPRVRTITTLAPTCTSIVPLSSSLLLDSYC-QPNPQLNIYSSNRTIDDFVKSGH 59
M S+ P ++T C+ ++ L + C + +L+ Y ++ +D + K
Sbjct: 199 MESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDC 258
Query: 60 LNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVLSV 119
L A+++F +MP + +V +N +I G K + + + M+ G + S +T +S+L
Sbjct: 259 LEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMA 318
Query: 120 CSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATW 179
CS + G IH V+ ++Y+ L+DLY + G + A +F + + +W
Sbjct: 319 CSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESW 378
Query: 180 NLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIK 239
N+M+ ++ + + + +Y++M + GV+P+ ++F ++ CS L++GKQ+H + +
Sbjct: 379 NVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISE 438
Query: 240 LGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALE 299
++ + + +AL+D YS CG+ EA + F+ IP DV+SW ++S Y + +AL
Sbjct: 439 -SRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALY 497
Query: 300 LFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYV-TKLGFDHGSVHVQSALTDM 358
F MQ +P + + L+ G + G + + +K G + H S + D+
Sbjct: 498 QFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHY-SCMIDI 556
Query: 359 YGKCNVIESSVAVFESAPGRS 379
G+ + + + + P S
Sbjct: 557 LGRAGRLLEAYEIIQQTPETS 577
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 317 bits (812), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 201/635 (31%), Positives = 341/635 (53%), Gaps = 28/635 (4%)
Query: 47 SNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGI 106
+N ++ + K G + K+FD + R+ V++N LIS F + AL + M+ +
Sbjct: 136 ANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENV 195
Query: 107 KESASTFSSVLSVCSNAGFYTEGI----QIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSV 162
+ S+ T SV++ CSN EG+ Q+H L G LN +I + LV +Y ++G
Sbjct: 196 EPSSFTLVSVVTACSNLPM-PEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLA 253
Query: 163 RALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCS 222
+ L R+L TWN +L + C+ + E L +M EGVEP+ + ++ CS
Sbjct: 254 SSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACS 313
Query: 223 IGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWN 282
+L GK+LH++ +K G +D N FV +ALVD Y C ++ ++ FD + + WN
Sbjct: 314 HLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWN 373
Query: 283 SIVSIYADYDLIFDALELFFRMQ----LCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGY 338
++++ Y+ + +AL LF M+ L ++ V R+G + IHG+
Sbjct: 374 AMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPA---CVRSGAFSRKEAIHGF 430
Query: 339 VTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKD 398
V K G D VQ+ L DMY + I+ ++ +F R L N+++T + S + +D
Sbjct: 431 VVKRGLDRDRF-VQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHED 489
Query: 399 AVEMFGFM------VDEG-----IGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSG 447
A+ + M V +G + + +TL T L S +A + L + +H AIK+
Sbjct: 490 ALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP--SCAALSALAKGKEIHAYAIKNN 547
Query: 448 FESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLE 507
+++AV +L+D Y++CG +++S +VF++IP NV+ + I+ Y +G G+EA+D+L
Sbjct: 548 LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLR 607
Query: 508 VMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRA 567
+M+ +G+ P++VTF+ V A C+HSGMV EG +F MK YG++ HY+C++D+LGRA
Sbjct: 608 MMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRA 667
Query: 568 GILDKAEELLQQTPGG-GDCMMWSSLLRSCRVHGNEIIGRRVANILMELEPVDFAVYSQV 626
G + +A +L+ P WSSLL + R+H N IG A L++LEP + Y +
Sbjct: 668 GRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLL 727
Query: 627 SNFYSEIGEFEVSMQIRETALARKLTRDIGHSLIE 661
+N YS G ++ + ++R + + ++ G S IE
Sbjct: 728 ANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIE 762
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 133/529 (25%), Positives = 251/529 (47%), Gaps = 28/529 (5%)
Query: 92 KQALYLYDEMVSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLN-LYIGSP 150
++A+ Y +M+ GIK F ++L ++ G QIH V G+G++ + + +
Sbjct: 79 REAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANT 138
Query: 151 LVDLYMRMGPSVRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPN 210
LV+LY + G +FD + ERN +WN ++ + C + + L + M E VEP+
Sbjct: 139 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPS 198
Query: 211 GLSFCYMVRGCS-----IGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIE 265
+ +V CS G+++ GKQ+H++ ++ G ++N F+ N LV Y G L
Sbjct: 199 SFTLVSVVTACSNLPMPEGLMM--GKQVHAYGLRKG--ELNSFIINTLVAMYGKLGKLAS 254
Query: 266 AKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASR 325
+K D+++WN+++S + + +ALE M L P + L S
Sbjct: 255 SKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSH 314
Query: 326 TGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNS 385
+ GK++H Y K G + V SAL DMY C + S VF+ R + N+
Sbjct: 315 LEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNA 374
Query: 386 LMTSLLHSGNIKDAVEMF-GFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAI 444
++ + + K+A+ +F G G+ + T++ + A S + +H +
Sbjct: 375 MIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA--FSRKEAIHGFVV 432
Query: 445 KSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALD 504
K G + + V +LMD YSR G I+++ ++F K+ ++V + +++ GY + +AL
Sbjct: 433 KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALL 492
Query: 505 MLEVM------IQRG-----LIPDKVTFLCVLAGCNH-SGMVKEGQLVFNSMKSVYGIDA 552
+L M + +G L P+ +T + +L C S + K ++ ++K+ +
Sbjct: 493 LLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN--NLAT 550
Query: 553 DRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHGN 601
D S ++DM + G L + ++ Q P + + W+ ++ + +HGN
Sbjct: 551 DVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 134/498 (26%), Positives = 234/498 (46%), Gaps = 25/498 (5%)
Query: 1 MLSTKLLPRVRTITTLAPTCTSIVPLSSSLLL----DSYCQPNPQLNIYSSNRTIDDFVK 56
ML + P T+ ++ C+++ P+ L++ +Y +LN + N + + K
Sbjct: 190 MLDENVEPSSFTLVSVVTACSNL-PMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGK 248
Query: 57 SGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSV 116
G L S+K L RD+VT+N ++S + +AL EMV G++ T SSV
Sbjct: 249 LGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSV 308
Query: 117 LSVCSNAGFYTEGIQIHCRVLSLG-FGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERN 175
L CS+ G ++H L G N ++GS LVD+Y + +FD + +R
Sbjct: 309 LPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRK 368
Query: 176 LATWNLMLRAFCELSRPDEVLRMYNKM-KAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLH 234
+ WN M+ + + E L ++ M ++ G+ N + +V C + +H
Sbjct: 369 IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIH 428
Query: 235 SHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLI 294
V+K G +D + FV N L+D YS G + A + F + D+++WN++++ Y +
Sbjct: 429 GFVVKRG-LDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHH 487
Query: 295 FDALELFFRMQ-LCRK----------RPSIRSFVEFLNFASRTGNVYFGKQIHGYVTK-- 341
DAL L +MQ L RK +P+ + + L + + GK+IH Y K
Sbjct: 488 EDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNN 547
Query: 342 LGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVE 401
L D V V SAL DMY KC ++ S VF+ P +++ N ++ + GN ++A++
Sbjct: 548 LATD---VAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAID 604
Query: 402 MFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDA 461
+ M+ +G+ +EVT + A S S + G R+ + G E + ++D
Sbjct: 605 LLRMMMVQGVKPNEVTFISVFAACSHSGMVDEG-LRIFYVMKPDYGVEPSSDHYACVVDL 663
Query: 462 YSRCGHIELSHQVFEKIP 479
R G I+ ++Q+ +P
Sbjct: 664 LGRAGRIKEAYQLMNMMP 681
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 204/427 (47%), Gaps = 15/427 (3%)
Query: 174 RNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQL 233
R+ W +LR+ + E + Y M G++P+ +F +++ + ++ GKQ+
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 234 HSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDL 293
H+HV K G+ ++ VAN LV+ Y CG K FD I + +SWNS++S ++
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179
Query: 294 IFDALELFFRMQLCRKRPSIRSFVEFLNFASR---TGNVYFGKQIHGYVTKLGFDHGSVH 350
ALE F M PS + V + S + GKQ+H Y G G ++
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAY----GLRKGELN 235
Query: 351 --VQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVD 408
+ + L MYGK + SS + S GR L N++++SL + + +A+E MV
Sbjct: 236 SFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVL 295
Query: 409 EGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSG-FESNIAVSCSLMDAYSRCGH 467
EG+ DE T+S+ L A S G + LH A+K+G + N V +L+D Y C
Sbjct: 296 EGVEPDEFTISSVLPACSHLEMLRTG--KELHAYALKNGSLDENSFVGSALVDMYCNCKQ 353
Query: 468 IELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQR-GLIPDKVTFLCVLA 526
+ +VF+ + + + +++ GYS+N +EAL + M + GL+ + T V+
Sbjct: 354 VLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVP 413
Query: 527 GCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDC 586
C SG + + + G+D DR + ++DM R G +D A + + D
Sbjct: 414 ACVRSGAFSRKEAIHGFVVK-RGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDL 471
Query: 587 MMWSSLL 593
+ W++++
Sbjct: 472 VTWNTMI 478
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 315 bits (807), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 182/664 (27%), Positives = 340/664 (51%), Gaps = 9/664 (1%)
Query: 6 LLPRVRTITTLAPTCTSIVPLSSSLLLDSYCQPNPQLNI-YSSNRTIDDFVKSGHLNSAK 64
++ VR T+ CT+ + L + ++ + + Q+ + + N + + +G+L +A+
Sbjct: 1 MISSVRNCGTIQRFCTTSISLLQKPVEENIVRISNQVMVKFDPNSHLRSLINAGNLRAAR 60
Query: 65 KLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEM--VSHGIKESASTFSSVLSVCSN 122
++FD+MP D+V++ +I + +AL L+ M V H + S S VL C
Sbjct: 61 QVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQ 120
Query: 123 AGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATWNLM 182
+ G +H + ++Y+GS L+D+Y R+G ++ +F E+P RN TW +
Sbjct: 121 SSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAI 180
Query: 183 LRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGW 242
+ R E L +++M + +F ++ C+ + GK +H+HVI G+
Sbjct: 181 ITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGF 240
Query: 243 VDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFF 302
V + VAN+L Y+ CG + + F+ + DV+SW S++ Y A+E F
Sbjct: 241 V-TTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFI 299
Query: 303 RMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKC 362
+M+ + P+ ++F + + + +G+Q+H V LG + S+ V +++ MY C
Sbjct: 300 KMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLND-SLSVSNSMMKMYSTC 358
Query: 363 NVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTL 422
+ S+ +F+ R + ++++ +G ++ + F +M G + L++ L
Sbjct: 359 GNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLL 418
Query: 423 KALSVSAS-ANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSP 481
SVS + A + R +H A+ G E N V SL++ YS+CG I+ + +F +
Sbjct: 419 ---SVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRD 475
Query: 482 NVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVF 541
++V T+++NGY+ +G +EA+D+ E ++ G PD VTF+ VL C HSG + G F
Sbjct: 476 DIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYF 535
Query: 542 NSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHGN 601
N M+ Y + ++HY CM+D+L RAG L AE+++ + D ++W++LL +C+ G+
Sbjct: 536 NMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGD 595
Query: 602 EIIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQIRETALARKLTRDIGHSLIE 661
GRR A ++EL+P ++N YS G E + +R+ A+ + ++ G S I+
Sbjct: 596 IERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIK 655
Query: 662 VNSC 665
+ C
Sbjct: 656 IKDC 659
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 314 bits (805), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 183/616 (29%), Positives = 338/616 (54%), Gaps = 10/616 (1%)
Query: 51 IDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESA 110
+D ++K + +K+FDEM R++VT+ LISG + + L L+ M + G + ++
Sbjct: 135 VDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNS 194
Query: 111 STFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDE 170
TF++ L V + G G+Q+H V+ G + + + L++LY++ G +A LFD+
Sbjct: 195 FTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDK 254
Query: 171 LPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEG 230
+++ TWN M+ + E L M+ M+ V + SF +++ C+ L
Sbjct: 255 TEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFT 314
Query: 231 KQLHSHVIKLGWV-DVNIFVANALVDFYSACGSLIEAKKSFDFIP-VDDVISWNSIVSIY 288
+QLH V+K G++ D NI AL+ YS C ++++A + F I V +V+SW +++S +
Sbjct: 315 EQLHCSVVKYGFLFDQNI--RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGF 372
Query: 289 ADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGS 348
D +A++LF M+ RP+ ++ L V ++H V K ++ S
Sbjct: 373 LQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP----VISPSEVHAQVVKTNYERSS 428
Query: 349 VHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVD 408
V +AL D Y K +E + VF + + ++++ +G + A++MFG +
Sbjct: 429 T-VGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTK 487
Query: 409 EGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHI 468
GI +E T S+ L + + +A++G + H AIKS +S++ VS +L+ Y++ G+I
Sbjct: 488 GGIKPNEFTFSSILNVCAAT-NASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNI 546
Query: 469 ELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGC 528
E + +VF++ ++V + S+++GY+++G +ALD+ + M +R + D VTF+ V A C
Sbjct: 547 ESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAAC 606
Query: 529 NHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMM 588
H+G+V+EG+ F+ M I ++H SCM+D+ RAG L+KA ++++ P +
Sbjct: 607 THAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTI 666
Query: 589 WSSLLRSCRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQIRETALA 648
W ++L +CRVH +GR A ++ ++P D A Y +SN Y+E G+++ ++R+
Sbjct: 667 WRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNE 726
Query: 649 RKLTRDIGHSLIEVNS 664
R + ++ G+S IEV +
Sbjct: 727 RNVKKEPGYSWIEVKN 742
Score = 243 bits (620), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 160/555 (28%), Positives = 291/555 (52%), Gaps = 24/555 (4%)
Query: 55 VKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFS 114
V S L +A LFD+ P RD +Y L+ G + ++A L+ + G++ S FS
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97
Query: 115 SVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPER 174
SVL V + G Q+HC+ + GF ++ +G+ LVD YM+ +FDE+ ER
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157
Query: 175 NLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGK--- 231
N+ TW ++ + S DEVL ++ +M+ EG +PN +F ++G+L +EG
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTF-----AAALGVLAEEGVGGR 212
Query: 232 --QLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYA 289
Q+H+ V+K G +D I V+N+L++ Y CG++ +A+ FD V V++WNS++S YA
Sbjct: 213 GLQVHTVVVKNG-LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 290 DYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSV 349
L +AL +F+ M+L R S SF + + + F +Q+H V K GF
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQ- 330
Query: 350 HVQSALTDMYGKCNVIESSVAVF-ESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVD 408
++++AL Y KC + ++ +F E ++ ++++ L + ++AV++F M
Sbjct: 331 NIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKR 390
Query: 409 EGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHI 468
+G+ +E T S L AL V + + +H +K+ +E + V +L+DAY + G +
Sbjct: 391 KGVRPNEFTYSVILTALPVISPSE------VHAQVVKTNYERSSTVGTALLDAYVKLGKV 444
Query: 469 ELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGC 528
E + +VF I ++V +++++ GY++ G A+ M + + G+ P++ TF +L C
Sbjct: 445 EEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 504
Query: 529 --NHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDC 586
++ M + Q ++KS +D+ S ++ M + G ++ AEE+ ++ D
Sbjct: 505 AATNASMGQGKQFHGFAIKS--RLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDL 561
Query: 587 MMWSSLLRSCRVHGN 601
+ W+S++ HG
Sbjct: 562 VSWNSMISGYAQHGQ 576
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 221/440 (50%), Gaps = 15/440 (3%)
Query: 47 SNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGI 106
SN I+ ++K G++ A+ LFD+ + +VT+N +ISG +AL ++ M + +
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291
Query: 107 KESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALD 166
+ S S+F+SV+ +C+N Q+HC V+ GF + I + L+ Y + + AL
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351
Query: 167 LFDELP-ERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGM 225
LF E+ N+ +W M+ F + +E + ++++MK +GV PN ++ ++ +
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL----TAL 407
Query: 226 LLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIV 285
+ ++H+ V+K + + + V AL+D Y G + EA K F I D+++W++++
Sbjct: 408 PVISPSEVHAQVVKTNY-ERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAML 466
Query: 286 SIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNF-ASRTGNVYFGKQIHGYVTKLGF 344
+ YA A+++F + +P+ +F LN A+ ++ GKQ HG+ K
Sbjct: 467 AGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRL 526
Query: 345 DHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFG 404
D S+ V SAL MY K IES+ VF+ + L NS+++ G A+++F
Sbjct: 527 D-SSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFK 585
Query: 405 FMVDEGIGLDEVTLSTTLKALSVSASANLGSCR---LLHCCAIKSGFESNIAVSCSLMDA 461
M + +D VT A + + G ++ C I E N SC ++D
Sbjct: 586 EMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHN---SC-MVDL 641
Query: 462 YSRCGHIELSHQVFEKIPSP 481
YSR G +E + +V E +P+P
Sbjct: 642 YSRAGQLEKAMKVIENMPNP 661
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 313 bits (801), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 184/622 (29%), Positives = 335/622 (53%), Gaps = 6/622 (0%)
Query: 43 NIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMV 102
NIY + + + K + +A K+F+ + ++ V +N +I G + + L+ +M
Sbjct: 361 NIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK 420
Query: 103 SHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSV 162
S G TF+S+LS C+ + G Q H ++ NL++G+ LVD+Y + G
Sbjct: 421 SSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALE 480
Query: 163 RALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCS 222
A +F+ + +R+ TWN ++ ++ + E ++ +M G+ +G ++ C+
Sbjct: 481 DARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACT 540
Query: 223 IGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWN 282
L +GKQ+H +K G +D ++ ++L+D YS CG + +A+K F +P V+S N
Sbjct: 541 HVHGLYQGKQVHCLSVKCG-LDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMN 599
Query: 283 SIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKL 342
++++ Y+ +L +A+ LF M PS +F + + ++ G Q HG +TK
Sbjct: 600 ALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKR 658
Query: 343 GFDHGSVHVQSALTDMYGKCNVIESSVAVF-ESAPGRSLECCNSLMTSLLHSGNIKDAVE 401
GF ++ +L MY + + A+F E + +S+ +M+ +G ++A++
Sbjct: 659 GFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALK 718
Query: 402 MFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDA 461
+ M +G+ D+ T T L+ SV +S G R +H + + S +L+D
Sbjct: 719 FYKEMRHDGVLPDQATFVTVLRVCSVLSSLREG--RAIHSLIFHLAHDLDELTSNTLIDM 776
Query: 462 YSRCGHIELSHQVFEKIPS-PNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVT 520
Y++CG ++ S QVF+++ NVV + S++NGY++NG +AL + + M Q ++PD++T
Sbjct: 777 YAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEIT 836
Query: 521 FLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQT 580
FL VL C+H+G V +G+ +F M YGI+A H +CM+D+LGR G L +A++ ++
Sbjct: 837 FLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQ 896
Query: 581 PGGGDCMMWSSLLRSCRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSM 640
D +WSSLL +CR+HG++I G A L+ELEP + + Y +SN Y+ G +E +
Sbjct: 897 NLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKAN 956
Query: 641 QIRETALARKLTRDIGHSLIEV 662
+R+ R + + G+S I+V
Sbjct: 957 ALRKVMRDRGVKKVPGYSWIDV 978
Score = 257 bits (656), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 164/545 (30%), Positives = 278/545 (51%), Gaps = 8/545 (1%)
Query: 51 IDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESA 110
I+ +++ G L A+ LF EM + D+V +N++ISG GK A+ + M +K +
Sbjct: 268 INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTR 327
Query: 111 STFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDE 170
ST SVLS G+ +H + LG N+Y+GS LV +Y + A +F+
Sbjct: 328 STLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA 387
Query: 171 LPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEG 230
L E+N WN M+R + +V+ ++ MK+ G + +F ++ C+ L+ G
Sbjct: 388 LEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG 447
Query: 231 KQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYAD 290
Q HS +IK N+FV NALVD Y+ CG+L +A++ F+ + D ++WN+I+ Y
Sbjct: 448 SQFHSIIIKKKLAK-NLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQ 506
Query: 291 YDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVH 350
+ +A +LF RM LC L + +Y GKQ+H K G D +H
Sbjct: 507 DENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDR-DLH 565
Query: 351 VQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEG 410
S+L DMY KC +I+ + VF S P S+ N+L+ + N+++AV +F M+ G
Sbjct: 566 TGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRG 624
Query: 411 IGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIA-VSCSLMDAYSRCGHIE 469
+ E+T +T ++A S LG+ H K GF S + SL+ Y +
Sbjct: 625 VNPSEITFATIVEACHKPESLTLGT--QFHGQITKRGFSSEGEYLGISLLGMYMNSRGMT 682
Query: 470 LSHQVFEKIPSP-NVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGC 528
+ +F ++ SP ++V +T +M+G+S+NG EAL + M G++PD+ TF+ VL C
Sbjct: 683 EACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVC 742
Query: 529 NHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMM 588
+ ++EG+ + +S+ D D + +IDM + G + + ++ + + +
Sbjct: 743 SVLSSLREGRAI-HSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVS 801
Query: 589 WSSLL 593
W+SL+
Sbjct: 802 WNSLI 806
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/534 (24%), Positives = 239/534 (44%), Gaps = 41/534 (7%)
Query: 48 NRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIK 107
N +D + K ++ A+K FD + +D+ +N ++S P + L + + + I
Sbjct: 99 NAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIF 157
Query: 108 ESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDL 167
+ TFS VLS C+ G QIHC ++ +G N Y G LVD+Y + A +
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 168 FDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLL 227
F+ + + N W + + + P+E + ++ +M+ EG P+ L+F
Sbjct: 218 FEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFV------------ 265
Query: 228 DEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSI 287
+++ Y G L +A+ F + DV++WN ++S
Sbjct: 266 ------------------------TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISG 301
Query: 288 YADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHG 347
+ A+E FF M+ + + + L+ N+ G +H KLG
Sbjct: 302 HGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGL-AS 360
Query: 348 SVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMV 407
+++V S+L MY KC +E++ VFE+ ++ N+++ H+G +E+F M
Sbjct: 361 NIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK 420
Query: 408 DEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGH 467
G +D+ T ++ L + S +GS H IK N+ V +L+D Y++CG
Sbjct: 421 SSGYNIDDFTFTSLLSTCAASHDLEMGS--QFHSIIIKKKLAKNLFVGNALVDMYAKCGA 478
Query: 468 IELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAG 527
+E + Q+FE++ + V + +I+ Y ++ EA D+ + M G++ D L
Sbjct: 479 LEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKA 538
Query: 528 CNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTP 581
C H + +G+ V + + G+D D S +IDM + GI+ A ++ P
Sbjct: 539 CTHVHGLYQGKQV-HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 221/474 (46%), Gaps = 42/474 (8%)
Query: 129 GIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATWNLMLRAFCE 188
G +H + L LG +G+ +VDLY + A FD L E+++ WN ML +
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSS 137
Query: 189 LSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIF 248
+ +P +VLR + + + PN +F ++ C+ ++ G+Q+H +IK+G ++ N +
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMG-LERNSY 196
Query: 249 VANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFFRMQLCR 308
ALVD Y+ C + +A++ F++I + + W + S Y L +A+ +F RM+
Sbjct: 197 CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256
Query: 309 KRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESS 368
RP +FV +N R G + + + G ++ +V+ +
Sbjct: 257 HRPDHLAFVTVINTYIRLGKLKDARLLFGEMS--------------------SPDVVAWN 296
Query: 369 VAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLKALSVS 428
V + G C ++ A+E F M + TL + L A+ +
Sbjct: 297 VMI----SGHGKRGCETV------------AIEYFFNMRKSSVKSTRSTLGSVLSAIGIV 340
Query: 429 ASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTS 488
A+ +LG ++H AIK G SNI V SL+ YS+C +E + +VFE + N V + +
Sbjct: 341 ANLDLG--LVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNA 398
Query: 489 IMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVY 548
++ GY+ NG + +++ M G D TF +L+ C S ++ G F+S+
Sbjct: 399 MIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKK 457
Query: 549 GIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHGNE 602
+ + + ++DM + G L+ A ++ ++ D + W++++ S NE
Sbjct: 458 KLAKNLFVGNALVDMYAKCGALEDARQIFERMC-DRDNVTWNTIIGSYVQDENE 510
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 18/229 (7%)
Query: 6 LLPRVRTITTLAPTCTSIVPLSSSLLLDSYC-QPNPQLNIYSSNRTIDDFVKSGHLNSAK 64
+LP T T+ C+ + L + S L+ +SN ID + K G + +
Sbjct: 728 VLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSS 787
Query: 65 KLFDEMPAR-DMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVLSVCSNA 123
++FDEM R ++V++N LI+G K + + AL ++D M I TF VL+ CS+A
Sbjct: 788 QVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHA 847
Query: 124 GFYTEGIQIHCRVLSLGFGLNLYIG--SPLVDLYMRMGPSVRALDLFDEL---PERNLAT 178
G ++G +I ++ +G+ + + +VDL R G A D + P+ L
Sbjct: 848 GKVSDGRKIFEMMIG-QYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARL-- 904
Query: 179 WNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNG------LSFCYMVRGC 221
W+ +L A C + D++ + K +EP LS Y +GC
Sbjct: 905 WSSLLGA-CRI-HGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGC 951
>sp|Q9SCT2|PP277_ARATH Pentatricopeptide repeat-containing protein At3g50420
OS=Arabidopsis thaliana GN=PCMP-E85 PE=2 SV=1
Length = 794
Score = 307 bits (787), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 193/625 (30%), Positives = 336/625 (53%), Gaps = 12/625 (1%)
Query: 45 YSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALY---LYDEM 101
Y++N I +V+ G L A+K+FD+MP R++V+YN L S R+P A Y L M
Sbjct: 133 YANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYS--RNPDFASYAFPLTTHM 190
Query: 102 VSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPS 161
+K ++STF+S++ VC+ G ++ +++ LG+ N+ + + ++ +Y G
Sbjct: 191 AFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDL 250
Query: 162 VRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGC 221
A +FD + R+ WN M+ + + ++ L + M GV+P ++ ++ GC
Sbjct: 251 ESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGC 310
Query: 222 SIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISW 281
S GK +H+ +I + ++ + NAL+D Y +CG + EA F I +++SW
Sbjct: 311 SKLGSYSLGKLIHARIIVSDSL-ADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSW 369
Query: 282 NSIVSIYADYDLIFDALELFFRM-QLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVT 340
NSI+S ++ A+ ++ R+ ++ RP +F ++ + GK +HG VT
Sbjct: 370 NSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVT 429
Query: 341 KLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAV 400
KLG++ SV V + L MY K ES+ VF+ R + ++ GN + AV
Sbjct: 430 KLGYER-SVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAV 488
Query: 401 EMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMD 460
+ F M E D +LS+ + A S A G + HC AI++GF+ ++V +L+D
Sbjct: 489 QFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQG--EVFHCLAIRTGFDCVMSVCGALVD 546
Query: 461 AYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVT 520
Y + G E + +F +P++ C+ S++ YS++GM +AL E +++ G +PD VT
Sbjct: 547 MYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVT 606
Query: 521 FLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQT 580
+L +LA C+H G +G+ ++N MK GI A +HYSCM++++ +AG++D+A EL++Q+
Sbjct: 607 YLSLLAACSHRGSTLQGKFLWNQMKE-QGIKAGFKHYSCMVNLVSKAGLVDEALELIEQS 665
Query: 581 -PGGGDCMMWSSLLRSCRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVS 639
PG +W +LL +C N IG A +++L+P D A + +SN Y+ G +E
Sbjct: 666 PPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDV 725
Query: 640 MQIRETALARKLTRDIGHSLIEVNS 664
++R ++D G S IEVN+
Sbjct: 726 AEMRRKIRGLASSKDPGLSWIEVNN 750
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 152/574 (26%), Positives = 269/574 (46%), Gaps = 31/574 (5%)
Query: 45 YSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSH 104
Y++N I +V+ L A+K+FD+MP R++VT L F + L+ +++
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVT---LFGLSAVFEYVSMGSSLHSQIIKL 79
Query: 105 G---------IKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGL---NLYIGSPLV 152
G + E AS+ + C + QIH VL+ G G + Y + L+
Sbjct: 80 GSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLI 139
Query: 153 DLYMRMGPSVRALDLFDELPERNLATWNLMLRAFCELSRPD---EVLRMYNKMKAEGVEP 209
+Y+R G +A +FD++P RN+ ++N + A+ PD + M E V+P
Sbjct: 140 SMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSR--NPDFASYAFPLTTHMAFEYVKP 197
Query: 210 NGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKS 269
N +F +V+ C++ + G L+S +IKLG+ D N+ V +++ YS+CG L A++
Sbjct: 198 NSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSD-NVVVQTSVLGMYSSCGDLESARRI 256
Query: 270 FDFIPVDDVISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNV 329
FD + D ++WN+++ D I D L F M + P+ ++ LN S+ G+
Sbjct: 257 FDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSY 316
Query: 330 YFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTS 389
GK IH + + + + +AL DMY C + + VF +L NS+++
Sbjct: 317 SLGKLIHARII-VSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISG 375
Query: 390 LLHSGNIKDAVEMFGFMVDEGIGL-DEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGF 448
+G + A+ M+ ++ DE T S + A + G +LLH K G+
Sbjct: 376 CSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHG--KLLHGQVTKLGY 433
Query: 449 ESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEV 508
E ++ V +L+ Y + E + +VF+ + +VV +T ++ G+SR G A+
Sbjct: 434 ERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIE 493
Query: 509 MIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAG 568
M + D + V+ C+ M+++G+ VF+ + G D ++DM G+ G
Sbjct: 494 MYREKNRSDGFSLSSVIGACSDMAMLRQGE-VFHCLAIRTGFDCVMSVCGALVDMYGKNG 552
Query: 569 ILDKAEEL--LQQTPGGGDCMMWSSLLRSCRVHG 600
+ AE + L P D W+S+L + HG
Sbjct: 553 KYETAETIFSLASNP---DLKCWNSMLGAYSQHG 583
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/487 (25%), Positives = 214/487 (43%), Gaps = 26/487 (5%)
Query: 8 PRVRTITTLAPTCTSI--VPLSSSLLLDSYCQPNPQL-------NIYSSNRTIDDFVKSG 58
P T T+L C + V + SSL N Q+ N+ + + G
Sbjct: 197 PNSSTFTSLVQVCAVLEDVLMGSSL--------NSQIIKLGYSDNVVVQTSVLGMYSSCG 248
Query: 59 HLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVLS 118
L SA+++FD + RD V +N +I G K + L + M+ G+ + T+S VL+
Sbjct: 249 DLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLN 308
Query: 119 VCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLAT 178
CS G Y+ G IH R++ +L + + L+D+Y G A +F + NL +
Sbjct: 309 GCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVS 368
Query: 179 WNLMLRAFCELSRPDEVLRMYNK-MKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHV 237
WN ++ E ++ + MY + ++ P+ +F + + GK LH V
Sbjct: 369 WNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQV 428
Query: 238 IKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDA 297
KLG+ + ++FV L+ Y A+K FD + DV+ W ++ ++ A
Sbjct: 429 TKLGY-ERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELA 487
Query: 298 LELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTD 357
++ F M + R S + S + G+ H + GFD + V AL D
Sbjct: 488 VQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFD-CVMSVCGALVD 546
Query: 358 MYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVT 417
MYGK E++ +F A L+C NS++ + G ++ A+ F +++ G D VT
Sbjct: 547 MYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVT 606
Query: 418 LSTTLKALSVSASANLGS--CRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVF 475
+ L A S S G + IK+GF+ SC +++ S+ G ++ + ++
Sbjct: 607 YLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKH---YSC-MVNLVSKAGLVDEALELI 662
Query: 476 EKIPSPN 482
E+ P N
Sbjct: 663 EQSPPGN 669
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 306 bits (785), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 191/617 (30%), Positives = 324/617 (52%), Gaps = 12/617 (1%)
Query: 47 SNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGI 106
SN + + K+G ++A +F+ + D+V++N ++SG F + AL M S G+
Sbjct: 114 SNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSG---FDDNQIALNFVVRMKSAGV 170
Query: 107 KESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALD 166
A T+S+ LS C + + G+Q+ V+ G +L +G+ + +Y R G A
Sbjct: 171 VFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARR 230
Query: 167 LFDELPERNLATWNLMLRAFC-ELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGM 225
+FDE+ +++ +WN +L E + E + ++ M EGVE + +SF ++ C
Sbjct: 231 VFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHET 290
Query: 226 LLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIV 285
L +Q+H IK G+ + + V N L+ YS CG L K F + +V+SW +++
Sbjct: 291 DLKLARQIHGLCIKRGYESL-LEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI 349
Query: 286 SIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFD 345
S D DA+ +F M+ P+ +FV +N + G +IHG K GF
Sbjct: 350 SSNKD-----DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFV 404
Query: 346 HGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGF 405
V ++ +Y K +E + FE R + N++++ +G +A++MF
Sbjct: 405 -SEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLS 463
Query: 406 MVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRC 465
E + +E T + L A++ + ++ + H +K G S VS +L+D Y++
Sbjct: 464 AAAETMP-NEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKR 522
Query: 466 GHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVL 525
G+I+ S +VF ++ N +TSI++ YS +G +++ MI+ + PD VTFL VL
Sbjct: 523 GNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVL 582
Query: 526 AGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGD 585
CN GMV +G +FN M VY ++ +HYSCM+DMLGRAG L +AEEL+ + PGG
Sbjct: 583 TACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPG 642
Query: 586 CMMWSSLLRSCRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQIRET 645
M S+L SCR+HGN +G +VA + ME++P Y Q+ N Y+E E++ + +IR+
Sbjct: 643 ESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKA 702
Query: 646 ALARKLTRDIGHSLIEV 662
+ ++++ G S I+V
Sbjct: 703 MRKKNVSKEAGFSWIDV 719
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 174/390 (44%), Gaps = 20/390 (5%)
Query: 154 LYMRM-GPSVRALDLFDELPERNLAT-WNLMLRAFCELSRPDEVLRMYN---KMKAEGVE 208
L+ R P A LFD +RN T N + + P L ++ ++ G
Sbjct: 16 LFQRFYSPYRIAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRH 75
Query: 209 PNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKK 268
+ ++ C ++ C L G Q+H G+ + V+NA++ Y G A
Sbjct: 76 MDEVTLCLALKACRGD--LKRGCQIHGFSTTSGFTSF-VCVSNAVMGMYRKAGRFDNALC 132
Query: 269 SFDFIPVDDVISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGN 328
F+ + DV+SWN+I+S + D + AL RM+ ++ L+F +
Sbjct: 133 IFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEG 189
Query: 329 VYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMT 388
G Q+ V K G + V V ++ MY + + VF+ + + NSL++
Sbjct: 190 FLLGLQLQSTVVKTGLESDLV-VGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLS 248
Query: 389 SLLHSGNIK-DAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSG 447
L G +AV +F M+ EG+ LD V+ ++ + + +L R +H IK G
Sbjct: 249 GLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVIT--TCCHETDLKLARQIHGLCIKRG 306
Query: 448 FESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLE 507
+ES + V LM YS+CG +E VF ++ NVV +T++++ +A+ +
Sbjct: 307 YESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK-----DDAVSIFL 361
Query: 508 VMIQRGLIPDKVTFLCVLAGCNHSGMVKEG 537
M G+ P++VTF+ ++ + +KEG
Sbjct: 362 NMRFDGVYPNEVTFVGLINAVKCNEQIKEG 391
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 410 GIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIE 469
G +DEVTL LKA +L +H + SGF S + VS ++M Y + G +
Sbjct: 73 GRHMDEVTLCLALKA----CRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFD 128
Query: 470 LSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCN 529
+ +FE + P+VV + +I++G+ N + AL+ + M G++ D T+ L+ C
Sbjct: 129 NALCIFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCV 185
Query: 530 HSGMVKEGQLVFNSMKSVY---GIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDC 586
S EG L+ ++S G+++D + I M R+G A + + D
Sbjct: 186 GS----EGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMS-FKDM 240
Query: 587 MMWSSLLRSCRVHGN-----EIIGRRVANILMELEPVDFA 621
+ W+SLL G +I R + +EL+ V F
Sbjct: 241 ISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFT 280
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 306 bits (785), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 167/560 (29%), Positives = 304/560 (54%), Gaps = 6/560 (1%)
Query: 106 IKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRAL 165
I S+L VC+ G +G Q+HC +L G GLNL + L+D+Y + + A
Sbjct: 2 IPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAY 61
Query: 166 DLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGM 225
+FD +PERN+ +W+ ++ L ++++M +G+ PN +F ++ C +
Sbjct: 62 KVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121
Query: 226 LLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIV 285
L++G Q+H +K+G+ ++ + V N+LVD YS CG + EA+K F I +ISWN+++
Sbjct: 122 ALEKGLQIHGFCLKIGF-EMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMI 180
Query: 286 SIYADYDLIFDALELFFRMQLC--RKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLG 343
+ + AL+ F MQ ++RP + L S TG +Y GKQIHG++ + G
Sbjct: 181 AGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSG 240
Query: 344 FD-HGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEM 402
F S + +L D+Y KC + S+ F+ +++ +SL+ G +A+ +
Sbjct: 241 FHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGL 300
Query: 403 FGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAY 462
F + + +D LS+ + + A G + SG E+ +V S++D Y
Sbjct: 301 FKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLET--SVLNSVVDMY 358
Query: 463 SRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFL 522
+CG ++ + + F ++ +V+ +T ++ GY ++G+G++++ + M++ + PD+V +L
Sbjct: 359 LKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYL 418
Query: 523 CVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPG 582
VL+ C+HSGM+KEG+ +F+ + +GI +HY+C++D+LGRAG L +A+ L+ P
Sbjct: 419 AVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPI 478
Query: 583 GGDCMMWSSLLRSCRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQI 642
+ +W +LL CRVHG+ +G+ V IL+ ++ + A Y +SN Y + G +
Sbjct: 479 KPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNA 538
Query: 643 RETALARKLTRDIGHSLIEV 662
RE + L ++ G S +E+
Sbjct: 539 RELGNIKGLKKEAGMSWVEI 558
Score = 166 bits (421), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 217/459 (47%), Gaps = 16/459 (3%)
Query: 42 LNIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEM 101
LN+ +SN ID + K A K+FD MP R++V+++ L+SG K +L L+ EM
Sbjct: 39 LNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEM 98
Query: 102 VSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPS 161
GI + TFS+ L C +G+QIH L +GF + + +G+ LVD+Y + G
Sbjct: 99 GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 158
Query: 162 VRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVE--PNGLSFCYMVR 219
A +F + +R+L +WN M+ F + L + M+ ++ P+ + +++
Sbjct: 159 NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 218
Query: 220 GCSIGMLLDEGKQLHSHVIKLGW-VDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDV 278
CS ++ GKQ+H +++ G+ + + +LVD Y CG L A+K+FD I +
Sbjct: 219 ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTM 278
Query: 279 ISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGY 338
ISW+S++ YA +A+ LF R+Q + + + + + GKQ+
Sbjct: 279 ISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQAL 338
Query: 339 VTKL--GFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNI 396
KL G + V +++ DMY KC +++ + F + + ++T G
Sbjct: 339 AVKLPSGLE---TSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLG 395
Query: 397 KDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGS---CRLLHCCAIKSGFESNIA 453
K +V +F M+ I DEV L A S S G +LL IK E
Sbjct: 396 KKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYAC 455
Query: 454 VSCSLMDAYSRCGHIELSHQVFEKIP-SPNVVCFTSIMN 491
V +D R G ++ + + + +P PNV + ++++
Sbjct: 456 V----VDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLS 490
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 182/379 (48%), Gaps = 12/379 (3%)
Query: 6 LLPRVRTITTLAPTCTSIVPLSSSLLLDSYC-QPNPQLNIYSSNRTIDDFVKSGHLNSAK 64
+ P T +T C + L L + +C + ++ + N +D + K G +N A+
Sbjct: 103 IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAE 162
Query: 65 KLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTF--SSVLSVCSN 122
K+F + R ++++N +I+G + +AL + M IKE F +S+L CS+
Sbjct: 163 KVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSS 222
Query: 123 AGFYTEGIQIHCRVLSLGFGL--NLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATWN 180
G G QIH ++ GF + I LVDLY++ G A FD++ E+ + +W+
Sbjct: 223 TGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWS 282
Query: 181 LMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKL 240
++ + + E + ++ +++ + + + ++ + LL +GKQ+ + +KL
Sbjct: 283 SLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKL 342
Query: 241 GWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALEL 300
+ V N++VD Y CG + EA+K F + + DVISW +++ Y + L ++ +
Sbjct: 343 P-SGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRI 401
Query: 301 FFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHG---SVHVQSALTD 357
F+ M P ++ L+ S +G + G+++ +KL HG V + + D
Sbjct: 402 FYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEEL---FSKLLETHGIKPRVEHYACVVD 458
Query: 358 MYGKCNVIESSVAVFESAP 376
+ G+ ++ + + ++ P
Sbjct: 459 LLGRAGRLKEAKHLIDTMP 477
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 149/297 (50%), Gaps = 12/297 (4%)
Query: 51 IDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESA 110
+D +VK G+L SA+K FD++ + M++++ LI G + +A+ L+ + + +
Sbjct: 254 VDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDS 313
Query: 111 STFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDE 170
SS++ V ++ +G Q+ + L GL + + +VD+Y++ G A F E
Sbjct: 314 FALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAE 373
Query: 171 LPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEG 230
+ +++ +W +++ + + + +R++ +M +EP+ + + ++ CS ++ EG
Sbjct: 374 MQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEG 433
Query: 231 KQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVD-DVISWNSIVS--- 286
++L S +++ + + +VD G L EAK D +P+ +V W +++S
Sbjct: 434 EELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCR 493
Query: 287 IYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLG 343
++ D +L + ++ R+ K P+ ++V N + G Y+ +Q G +LG
Sbjct: 494 VHGDIELGKEVGKILLRIDA--KNPA--NYVMMSNLYGQAG--YWNEQ--GNARELG 542
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 306 bits (785), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 179/609 (29%), Positives = 333/609 (54%), Gaps = 8/609 (1%)
Query: 56 KSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSS 115
++G+L+ A+K+FD MP RD+V ++ L+S C + +AL ++ MV G++ A T S
Sbjct: 148 QTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMIS 207
Query: 116 VLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERN 175
V+ C+ G +H ++ F L+ + + L+ +Y + G + + +F+++ ++N
Sbjct: 208 VVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKN 267
Query: 176 LATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHS 235
+W M+ ++ ++ LR +++M G+EPN ++ ++ C + L+ EGK +H
Sbjct: 268 AVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHG 327
Query: 236 HVIKLGWVDVNI-FVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLI 294
++ +D N ++ ALV+ Y+ CG L + + + ++++WNS++S+YA ++
Sbjct: 328 FAVRRE-LDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMV 386
Query: 295 FDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSA 354
AL LF +M R +P + ++ G V GKQIHG+V + D VQ++
Sbjct: 387 IQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRT--DVSDEFVQNS 444
Query: 355 LTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLD 414
L DMY K ++S+ VF RS+ NS++ +GN +A+ +F +M + ++
Sbjct: 445 LIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMN 504
Query: 415 EVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQV 474
EVT ++A S S G + +H I SG + ++ +L+D Y++CG + + V
Sbjct: 505 EVTFLAVIQACSSIGSLEKG--KWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETV 561
Query: 475 FEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMV 534
F + S ++V ++S++N Y +G A+ M++ G P++V F+ VL+ C HSG V
Sbjct: 562 FRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSV 621
Query: 535 KEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLLR 594
+EG+ FN MKS +G+ + +H++C ID+L R+G L +A +++ P D +W SL+
Sbjct: 622 EEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVN 680
Query: 595 SCRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQIRETALARKLTRD 654
CR+H I + + N L ++ D Y+ +SN Y+E GE+E ++R + L +
Sbjct: 681 GCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKV 740
Query: 655 IGHSLIEVN 663
G+S IE++
Sbjct: 741 PGYSAIEID 749
Score = 199 bits (505), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 149/577 (25%), Positives = 284/577 (49%), Gaps = 17/577 (2%)
Query: 4 TKLLPRVRTITTLAPTCTSIVPLSSSLLLDSYCQPNPQLNIYSSNRTIDDFVKSGHLNSA 63
T+ +P R+ ++L + L + LL+ + +P + I+ + G +S+
Sbjct: 2 TQYMPLFRSCSSLRL----VSQLHAHLLVTGRLRRDP----LPVTKLIESYAFMGSPDSS 53
Query: 64 KKLFDEMPARDMVTYNLLISGCGKFRHP-KQALYLYDEMVSHGIKESASTFSSVLSVCSN 122
+ +F+ P D Y +LI C + H A+ LY +VS + S F SVL C+
Sbjct: 54 RLVFEAFPYPDSFMYGVLIK-CNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAG 112
Query: 123 AGFY-TEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATWNL 181
+ + + G ++H R++ G + I + L+ +Y + G A +FD +P R+L W+
Sbjct: 113 SREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWST 172
Query: 182 MLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLG 241
++ + E + LRM+ M +GVEP+ ++ +V GC+ L + +H + +
Sbjct: 173 LVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITR-K 231
Query: 242 WVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELF 301
D++ + N+L+ YS CG L+ +++ F+ I + +SW +++S Y + AL F
Sbjct: 232 MFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSF 291
Query: 302 FRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGK 361
M P++ + L+ G + GK +HG+ + D + AL ++Y +
Sbjct: 292 SEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAE 351
Query: 362 CNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTT 421
C + V R++ NSL++ H G + A+ +F MV + I D TL+++
Sbjct: 352 CGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASS 411
Query: 422 LKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSP 481
+ A + LG + +H I++ S+ V SL+D YS+ G ++ + VF +I
Sbjct: 412 ISACENAGLVPLG--KQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHR 468
Query: 482 NVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVF 541
+VV + S++ G+S+NG EA+ + + M L ++VTFL V+ C+ G +++G+ V
Sbjct: 469 SVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVH 528
Query: 542 NSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQ 578
+ + + G+ D + +IDM + G L+ AE + +
Sbjct: 529 HKL-IISGL-KDLFTDTALIDMYAKCGDLNAAETVFR 563
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 207/448 (46%), Gaps = 10/448 (2%)
Query: 48 NRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIK 107
N + + K G L S++++F+++ ++ V++ +IS + ++AL + EM+ GI+
Sbjct: 241 NSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIE 300
Query: 108 ESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNL-YIGSPLVDLYMRMGPSVRALD 166
+ T SVLS C G EG +H + N + LV+LY G
Sbjct: 301 PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCET 360
Query: 167 LFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGML 226
+ + +RN+ WN ++ + + L ++ +M + ++P+ + + C L
Sbjct: 361 VLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGL 420
Query: 227 LDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVS 286
+ GKQ+H HVI+ D FV N+L+D YS GS+ A F+ I V++WNS++
Sbjct: 421 VPLGKQIHGHVIRTDVSDE--FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLC 478
Query: 287 IYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDH 346
++ +A+ LF M + +F+ + S G++ GK +H + G
Sbjct: 479 GFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK- 537
Query: 347 GSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFM 406
+ +AL DMY KC + ++ VF + RS+ +S++ + G I A+ F M
Sbjct: 538 -DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQM 596
Query: 407 VDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKS-GFESNIAVSCSLMDAYSRC 465
V+ G +EV L A S S G + +KS G N +D SR
Sbjct: 597 VESGTKPNEVVFMNVLSACGHSGSVEEGK---YYFNLMKSFGVSPNSEHFACFIDLLSRS 653
Query: 466 GHIELSHQVFEKIPS-PNVVCFTSIMNG 492
G ++ +++ +++P + + S++NG
Sbjct: 654 GDLKEAYRTIKEMPFLADASVWGSLVNG 681
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 219/459 (47%), Gaps = 13/459 (2%)
Query: 149 SPLVDLYMRMGPSVRALDLFDELPERNLATWNLMLR--AFCELSRPDEVLRMYNKMKAEG 206
+ L++ Y MG + +F+ P + + ++++ +C L D + +Y+++ +E
Sbjct: 38 TKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHL--LDAAIDLYHRLVSET 95
Query: 207 VEPNGLSFCYMVRGCSIGML-LDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIE 265
+ + F ++R C+ L G ++H +IK G VD + + +L+ Y G+L +
Sbjct: 96 TQISKFVFPSVLRACAGSREHLSVGGKVHGRIIK-GGVDDDAVIETSLLCMYGQTGNLSD 154
Query: 266 AKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASR 325
A+K FD +PV D+++W+++VS + + AL +F M P + + + +
Sbjct: 155 AEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAE 214
Query: 326 TGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNS 385
G + + +HG +T+ FD S LT MY KC + SS +FE ++ +
Sbjct: 215 LGCLRIARSVHGQITRKMFDLDETLCNSLLT-MYSKCGDLLSSERIFEKIAKKNAVSWTA 273
Query: 386 LMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIK 445
+++S + A+ F M+ GI + VTL + L + + G + +H A++
Sbjct: 274 MISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREG--KSVHGFAVR 331
Query: 446 SGFESNI-AVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALD 504
+ N ++S +L++ Y+ CG + V + N+V + S+++ Y+ GM +AL
Sbjct: 332 RELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALG 391
Query: 505 MLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDML 564
+ M+ + + PD T ++ C ++G+V G+ + + D Q+ +IDM
Sbjct: 392 LFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQN--SLIDMY 449
Query: 565 GRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHGNEI 603
++G +D A + Q + W+S+L +GN +
Sbjct: 450 SKSGSVDSASTVFNQIKHRS-VVTWNSMLCGFSQNGNSV 487
Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 203/427 (47%), Gaps = 36/427 (8%)
Query: 217 MVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVD 276
+ R CS L+ QLH+H++ G + + L++ Y+ GS ++ F+ P
Sbjct: 7 LFRSCSSLRLV---SQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYP 63
Query: 277 DVISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFV---EFLNFASRTGNVYFGK 333
D + ++ L+ A++L+ R L + I FV A ++ G
Sbjct: 64 DSFMYGVLIKCNVWCHLLDAAIDLYHR--LVSETTQISKFVFPSVLRACAGSREHLSVGG 121
Query: 334 QIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHS 393
++HG + K G D +V ++++L MYG+ + + VF+ P R L ++L++S L +
Sbjct: 122 KVHGRIIKGGVDDDAV-IETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLEN 180
Query: 394 GNIKDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRL---LHCCAIKSGFES 450
G + A+ MF MVD+G+ D VT+ + V A LG R+ +H + F+
Sbjct: 181 GEVVKALRMFKCMVDDGVEPDAVTMISV-----VEGCAELGCLRIARSVHGQITRKMFDL 235
Query: 451 NIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMI 510
+ + SL+ YS+CG + S ++FEKI N V +T++++ Y+R +AL MI
Sbjct: 236 DETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMI 295
Query: 511 QRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQ---HYS----CMIDM 563
+ G+ P+ VT VL+ C G+++EG KSV+G R+ +Y ++++
Sbjct: 296 KSGIEPNLVTLYSVLSSCGLIGLIREG-------KSVHGFAVRRELDPNYESLSLALVEL 348
Query: 564 LGRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHGNEII---GRRVANILMELEPVDF 620
G L E +L + + + W+SL+ S H +I G + ++P F
Sbjct: 349 YAECGKLSDCETVL-RVVSDRNIVAWNSLI-SLYAHRGMVIQALGLFRQMVTQRIKPDAF 406
Query: 621 AVYSQVS 627
+ S +S
Sbjct: 407 TLASSIS 413
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 146/300 (48%), Gaps = 10/300 (3%)
Query: 1 MLSTKLLPRVRTITTLAPTCTS--IVPLSSSLLLDSYCQPNPQLNIYSSNRTIDDFVKSG 58
M++ ++ P T+ + C + +VPL + + + + N ID + KSG
Sbjct: 396 MVTQRIKPDAFTLASSISACENAGLVPLGKQI--HGHVIRTDVSDEFVQNSLIDMYSKSG 453
Query: 59 HLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVLS 118
++SA +F+++ R +VT+N ++ G + + +A+ L+D M ++ + TF +V+
Sbjct: 454 SVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQ 513
Query: 119 VCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLAT 178
CS+ G +G +H +++ G +L+ + L+D+Y + G A +F + R++ +
Sbjct: 514 ACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVS 572
Query: 179 WNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVI 238
W+ M+ A+ R + +N+M G +PN + F ++ C ++EGK + +
Sbjct: 573 WSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMK 632
Query: 239 KLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIP-VDDVISWNSIVS---IYADYDLI 294
G V N +D S G L EA ++ +P + D W S+V+ I+ D+I
Sbjct: 633 SFG-VSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDII 691
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 300 bits (768), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 186/627 (29%), Positives = 330/627 (52%), Gaps = 11/627 (1%)
Query: 44 IYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGC---GKFRHPKQALYLYDE 100
I +N ++ + K G L A +F+ + +D+V++N LI+G G + L+ E
Sbjct: 49 IQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFRE 108
Query: 101 MVSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGP 160
M + I +A T + + S+ T G Q H V+ + ++Y+ + LV +Y + G
Sbjct: 109 MRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGL 168
Query: 161 SVRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYN---KMKAEGVEPNGLSFCYM 217
L +F +PERN TW+ M+ + R +E ++++N + K EG + + + F +
Sbjct: 169 VEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAV 227
Query: 218 VRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDD 277
+ + + + G+Q+H IK G + + ++NALV YS C SL EA K FD +
Sbjct: 228 LSSLAATIYVGLGRQIHCITIKNGLLGF-VALSNALVTMYSKCESLNEACKMFDSSGDRN 286
Query: 278 VISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHG 337
I+W+++V+ Y+ +A++LF RM +PS + V LN S + GKQ+H
Sbjct: 287 SITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHS 346
Query: 338 YVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIK 397
++ KLGF+ + +AL DMY K + + F+ R + SL++ + + + +
Sbjct: 347 FLLKLGFER-HLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNE 405
Query: 398 DAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCS 457
+A+ ++ M GI ++ T+++ LKA S A+ LG + +H IK GF + + +
Sbjct: 406 EALILYRRMKTAGIIPNDPTMASVLKACSSLATLELG--KQVHGHTIKHGFGLEVPIGSA 463
Query: 458 LMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPD 517
L YS+CG +E + VF + P+ +VV + ++++G S NG G EAL++ E M+ G+ PD
Sbjct: 464 LSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPD 523
Query: 518 KVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELL 577
VTF+ +++ C+H G V+ G FN M G+D HY+CM+D+L RAG L +A+E +
Sbjct: 524 DVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFI 583
Query: 578 QQTPGGGDCMMWSSLLRSCRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFE 637
+ +W LL +C+ HG +G LM L + + Y Q+S Y+ +G
Sbjct: 584 ESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMR 643
Query: 638 VSMQIRETALARKLTRDIGHSLIEVNS 664
++ + A +++++G S IE+ +
Sbjct: 644 DVERVWKHMRANGVSKEVGCSWIELKN 670
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 225/456 (49%), Gaps = 5/456 (1%)
Query: 43 NIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMV 102
+IY + + K+G + K+F MP R+ T++ ++SG ++A+ +++ +
Sbjct: 152 DIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFL 211
Query: 103 SHGIKESAS--TFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGP 160
+ S S F++VLS + + G QIHC + G + + + LV +Y +
Sbjct: 212 REKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCES 271
Query: 161 SVRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRG 220
A +FD +RN TW+ M+ + + E ++++++M + G++P+ + ++
Sbjct: 272 LNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNA 331
Query: 221 CSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVIS 280
CS L+EGKQLHS ++KLG+ + ++F ALVD Y+ G L +A+K FD + DV
Sbjct: 332 CSDICYLEEGKQLHSFLLKLGF-ERHLFATTALVDMYAKAGCLADARKGFDCLQERDVAL 390
Query: 281 WNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVT 340
W S++S Y +AL L+ RM+ P+ + L S + GKQ+HG+
Sbjct: 391 WTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTI 450
Query: 341 KLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAV 400
K GF V + SAL+ MY KC +E VF P + + N++++ L H+G +A+
Sbjct: 451 KHGFGL-EVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEAL 509
Query: 401 EMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMD 460
E+F M+ EG+ D+VT + A S G + + + G + + ++D
Sbjct: 510 ELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG-WFYFNMMSDQIGLDPKVDHYACMVD 568
Query: 461 AYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRN 496
SR G ++ + + E + +C I+ +N
Sbjct: 569 LLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKN 604
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 133/288 (46%), Gaps = 23/288 (7%)
Query: 1 MLSTKLLPRVRTITTLAPTCTSIVPLSSSLLLDSYC-QPNPQLNIYSSNRTIDDFVKSGH 59
M S + P TI + C+ I L L S+ + + +++++ +D + K+G
Sbjct: 313 MFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGC 372
Query: 60 LNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVLSV 119
L A+K FD + RD+ + LISG + ++AL LY M + GI + T +SVL
Sbjct: 373 LADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKA 432
Query: 120 CSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATW 179
CS+ G Q+H + GFGL + IGS L +Y + G +F P +++ +W
Sbjct: 433 CSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSW 492
Query: 180 NLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIK 239
N M+ + DE L ++ +M AEG+EP+ ++F ++ CS H ++
Sbjct: 493 NAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACS-----------HKGFVE 541
Query: 240 LGWVDVNIFVAN-----------ALVDFYSACGSLIEAKKSFDFIPVD 276
GW N+ +VD S G L EAK+ + +D
Sbjct: 542 RGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANID 589
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 419 STTLKALSV-SASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEK 477
ST LK L+ S NL + R +H I++G + I + L++ Y++CG + +H +F
Sbjct: 15 STLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNA 74
Query: 478 IPSPNVVCFTSIMNGYSRNG---MGREALDMLEVMIQRGLIPDKVTFLCVL---AGCNHS 531
I +VV + S++ GYS+NG + + M + ++P+ T + + S
Sbjct: 75 IICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSS 134
Query: 532 GMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSS 591
+ ++ + M S I D + ++ M +AG+++ ++ P + WS+
Sbjct: 135 TVGRQAHALVVKMSSFGDIYVD----TSLVGMYCKAGLVEDGLKVFAYMP-ERNTYTWST 189
Query: 592 LLRSCRVHGNEIIGRRVANILM 613
++ G +V N+ +
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFL 211
>sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protein At5g52850,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2
SV=1
Length = 893
Score = 298 bits (763), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 186/616 (30%), Positives = 320/616 (51%), Gaps = 12/616 (1%)
Query: 52 DDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESAS 111
D + K G A +LF + D +++ ++IS R ++AL Y EMV G+ +
Sbjct: 167 DLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEF 226
Query: 112 TFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDEL 171
TF +L S G G IH ++ G LN+ + + LVD Y + A+ + +
Sbjct: 227 TFVKLLGASSFLGLEF-GKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSS 285
Query: 172 PERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGK 231
E+++ W ++ F R E + + +M++ G++PN ++ ++ CS LD GK
Sbjct: 286 GEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGK 345
Query: 232 QLHSHVIKLGWVDVNIFVANALVDFYSAC-GSLIEAKKSFDFIPVDDVISWNSIVSIYAD 290
Q+HS IK+G+ D + V NALVD Y C S +EA + F + +V+SW +++ D
Sbjct: 346 QIHSQTIKVGFED-STDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVD 404
Query: 291 YDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVH 350
+ + D L M P++ + L S+ +V +IH Y+ + D G +
Sbjct: 405 HGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVD-GEMV 463
Query: 351 VQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEG 410
V ++L D Y ++ + V S R SL+T G + A+ + +M +G
Sbjct: 464 VGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDG 523
Query: 411 IGLDEVTLSTTLKALSVSASANLGSC---RLLHCCAIKSGFESNIAVSCSLMDAYSRCGH 467
I +D+++L +SASANLG+ + LHC ++KSGF +V SL+D YS+CG
Sbjct: 524 IRMDQLSLPGF-----ISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGS 578
Query: 468 IELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAG 527
+E + +VFE+I +P+VV + +++G + NG AL E M + PD VTFL +L+
Sbjct: 579 LEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSA 638
Query: 528 CNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCM 587
C++ + G F MK +Y I+ +HY ++ +LGRAG L++A +++ + M
Sbjct: 639 CSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAM 698
Query: 588 MWSSLLRSCRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQIRETAL 647
++ +LLR+CR GN +G +AN + L P D A+Y +++ Y E G+ E++ + R
Sbjct: 699 IFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMT 758
Query: 648 ARKLTRDIGHSLIEVN 663
++L++ +G S +EV
Sbjct: 759 EKRLSKKLGKSTVEVQ 774
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 160/607 (26%), Positives = 296/607 (48%), Gaps = 23/607 (3%)
Query: 6 LLPRVRTITTLAPTCTSIVPL----SSSLLLDSYCQPNPQLNIYSS----NRTIDDFVKS 57
L R + L +C I+ SS + L +C P + + + N + ++K+
Sbjct: 13 FLSRTNELGNLQKSCIRILSFCESNSSRIGLHIHC-PVIKFGLLENLDLCNNLLSLYLKT 71
Query: 58 GHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVL 117
+ +A+KLFDEM R + + ++IS K + AL L++EM++ G + TFSSV+
Sbjct: 72 DGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVV 131
Query: 118 SVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLA 177
C+ + G ++H V+ GF N +GS L DLY + G A +LF L +
Sbjct: 132 RSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTI 191
Query: 178 TWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHV 237
+W +M+ + + E L+ Y++M GV PN +F ++ G S + L+ GK +HS++
Sbjct: 192 SWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLL-GASSFLGLEFGKTIHSNI 250
Query: 238 IKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDA 297
I G + +N+ + +LVDFYS + +A + + DV W S+VS + +A
Sbjct: 251 IVRG-IPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEA 309
Query: 298 LELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTD 357
+ F M+ +P+ ++ L+ S ++ FGKQIH K+GF+ S V +AL D
Sbjct: 310 VGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFED-STDVGNALVD 368
Query: 358 MYGKCNVIESSVA-VFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEV 416
MY KC+ E + VF + ++ +L+ L+ G ++D + MV + + V
Sbjct: 369 MYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVV 428
Query: 417 TLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFE 476
TLS L+A S ++ +H ++ + + V SL+DAY+ ++ + V
Sbjct: 429 TLSGVLRA--CSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIR 486
Query: 477 KIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKE 536
+ + + +TS++ ++ G AL ++ M G+ D+++ ++ + G ++
Sbjct: 487 SMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALET 546
Query: 537 GQ-LVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQ--TPGGGDCMMWSSLL 593
G+ L S+KS G + ++DM + G L+ A+++ ++ TP D + W+ L+
Sbjct: 547 GKHLHCYSVKS--GFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATP---DVVSWNGLV 601
Query: 594 RSCRVHG 600
+G
Sbjct: 602 SGLASNG 608
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 297 bits (761), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 186/638 (29%), Positives = 330/638 (51%), Gaps = 15/638 (2%)
Query: 30 LLLDSYCQPNPQLNIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISG---CG 86
+L D Y + Q+N + R + F S + A +LFDEM D +N++I G CG
Sbjct: 51 VLRDRY-KVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCG 109
Query: 87 KFRHPKQALYLYDEMVSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLY 146
+ +A+ Y MV G+K T+ V+ + EG +IH V+ LGF ++Y
Sbjct: 110 LY---IEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVY 166
Query: 147 IGSPLVDLYMRMGPSVRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEG 206
+ + L+ LYM++G + A +F+E+PER++ +WN M+ + L L ++ +M G
Sbjct: 167 VCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCG 226
Query: 207 VEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEA 266
+P+ S + CS GK++H H ++ ++ V +++D YS G + A
Sbjct: 227 FKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYA 286
Query: 267 KKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFFRM-QLCRKRPSIRSFVEFLNFASR 325
++ F+ + ++++WN ++ YA + DA F +M + +P + + + L ++
Sbjct: 287 ERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA- 345
Query: 326 TGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNS 385
+ G+ IHGY + GF V +++AL DMYG+C ++S+ +F+ +++ NS
Sbjct: 346 ---ILEGRTIHGYAMRRGFLPHMV-LETALIDMYGECGQLKSAEVIFDRMAEKNVISWNS 401
Query: 386 LMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIK 445
++ + + +G A+E+F + D + D T+++ L A + S S + G R +H +K
Sbjct: 402 IIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEG--REIHAYIVK 459
Query: 446 SGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDM 505
S + SN + SL+ Y+ CG +E + + F I +VV + SI+ Y+ +G GR ++ +
Sbjct: 460 SRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWL 519
Query: 506 LEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLG 565
MI + P+K TF +LA C+ SGMV EG F SMK YGID +HY CM+D++G
Sbjct: 520 FSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIG 579
Query: 566 RAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHGNEIIGRRVANILMELEPVDFAVYSQ 625
R G A+ L++ P +W SLL + R H + I A + ++E + Y
Sbjct: 580 RTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVL 639
Query: 626 VSNFYSEIGEFEVSMQIRETALARKLTRDIGHSLIEVN 663
+ N Y+E G +E +I+ ++ ++R S +E
Sbjct: 640 LLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAK 677
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 296 bits (759), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 184/613 (30%), Positives = 316/613 (51%), Gaps = 10/613 (1%)
Query: 58 GHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIK--ESASTFSS 115
GH+ A+KLF+EMP +++YN++I + A+ ++ MVS G+K T+
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 116 VLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERN 175
V G+ +H R+L FG + Y+ + L+ +YM G A D+FD + R+
Sbjct: 123 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRD 182
Query: 176 LATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHS 235
+ +WN M+ + ++ L M++ M E V+ + + M+ C L+ G+ +H
Sbjct: 183 VISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK 242
Query: 236 HVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIF 295
V + D I V NALV+ Y CG + EA+ FD + DVI+W +++ Y + +
Sbjct: 243 LVEEKRLGD-KIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVE 301
Query: 296 DALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSAL 355
+ALEL MQ RP+ + ++ V GK +HG+ + + + ++++L
Sbjct: 302 NALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQV-YSDIIIETSL 360
Query: 356 TDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDE 415
MY KC ++ VF A ++++ + + + DA+ +F M E + +
Sbjct: 361 ISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNI 420
Query: 416 VTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVF 475
TL++ L A + A A+L +HC K+GF S++ + L+ YS+CG +E +H++F
Sbjct: 421 ATLNSLLPAYA--ALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIF 478
Query: 476 ----EKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHS 531
EK S +VV + ++++GY +G G AL + M++ G+ P+++TF L C+HS
Sbjct: 479 NGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHS 538
Query: 532 GMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSS 591
G+V+EG +F M Y A HY+C++D+LGRAG LD+A L+ P +W +
Sbjct: 539 GLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGA 598
Query: 592 LLRSCRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQIRETALARKL 651
LL +C H N +G AN L ELEP + Y ++N Y+ +G ++ ++R L
Sbjct: 599 LLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGL 658
Query: 652 TRDIGHSLIEVNS 664
+ GHS IE+ S
Sbjct: 659 RKKPGHSTIEIRS 671
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 203/439 (46%), Gaps = 7/439 (1%)
Query: 45 YSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSH 104
Y N + ++ G + A+ +FD M RD++++N +ISG + + AL ++D MV+
Sbjct: 153 YVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNE 212
Query: 105 GIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRA 164
+ +T S+L VC + G +H V G + + + LV++Y++ G A
Sbjct: 213 SVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEA 272
Query: 165 LDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIG 224
+FD + R++ TW M+ + E + L + M+ EGV PN ++ +V C
Sbjct: 273 RFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDA 332
Query: 225 MLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSI 284
+ +++GK LH ++ V +I + +L+ Y+ C + + F W++I
Sbjct: 333 LKVNDGKCLHGWAVRQQ-VYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAI 391
Query: 285 VSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGF 344
++ +L+ DAL LF RM+ P+I + L + ++ IH Y+TK GF
Sbjct: 392 IAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGF 451
Query: 345 DHGSVHVQSALTDMYGKCNVIESSVAVF----ESAPGRSLECCNSLMTSLLHSGNIKDAV 400
S+ + L +Y KC +ES+ +F E + + +L++ G+ +A+
Sbjct: 452 -MSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNAL 510
Query: 401 EMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMD 460
++F MV G+ +E+T ++ L A S S G + +C ++D
Sbjct: 511 QVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTC-IVD 569
Query: 461 AYSRCGHIELSHQVFEKIP 479
R G ++ ++ + IP
Sbjct: 570 LLGRAGRLDEAYNLITTIP 588
Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 113/514 (21%), Positives = 242/514 (47%), Gaps = 18/514 (3%)
Query: 109 SASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLF 168
S + S+L+ + ++ +HC V++ G ++ +I S L Y G A LF
Sbjct: 14 SVKQYQSLLNHFAATQSISKTKALHCHVIT-GGRVSGHILSTLSVTYALCGHITYARKLF 72
Query: 169 DELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVE--PNGLSFCYMVRGCSIGML 226
+E+P+ +L ++N+++R + + + ++ +M +EGV+ P+G ++ ++ +
Sbjct: 73 EEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKS 132
Query: 227 LDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVS 286
+ G +H +++ W + +V NAL+ Y G + A+ FD + DVISWN+++S
Sbjct: 133 MKLGLVVHGRILR-SWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMIS 191
Query: 287 IYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYV--TKLGF 344
Y + DAL +F M + V L ++ G+ +H V +LG
Sbjct: 192 GYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLG- 250
Query: 345 DHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFG 404
+ V++AL +MY KC ++ + VF+ R + ++ G++++A+E+
Sbjct: 251 --DKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCR 308
Query: 405 FMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSR 464
M EG+ + VT+++ + + N G C LH A++ S+I + SL+ Y++
Sbjct: 309 LMQFEGVRPNAVTIASLVSVCGDALKVNDGKC--LHGWAVRQQVYSDIIIETSLISMYAK 366
Query: 465 CGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCV 524
C ++L +VF + +++I+ G +N + +AL + + M + + P+ T +
Sbjct: 367 CKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSL 426
Query: 525 LAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEEL---LQQTP 581
L +++ + + G + + ++ + + G L+ A ++ +Q+
Sbjct: 427 LPAYAALADLRQAMNIHCYLTKT-GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKH 485
Query: 582 GGGDCMMWSSLLRSCRVHGNEIIGRRVANILMEL 615
D ++W +L+ +HG+ G + ME+
Sbjct: 486 KSKDVVLWGALISGYGMHGD---GHNALQVFMEM 516
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 296 bits (757), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 185/665 (27%), Positives = 339/665 (50%), Gaps = 6/665 (0%)
Query: 1 MLSTKLLPRVRTITTLAPTCTSIVPLSS-SLLLDSYCQPNPQLNIYSSNRTIDDFVKSGH 59
ML + P V T L C ++ L D+ N + ++ I +++ G
Sbjct: 129 MLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGK 188
Query: 60 LNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVLSV 119
++ KLFD + +D V +N++++G K + + M I +A TF VLSV
Sbjct: 189 IDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSV 248
Query: 120 CSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATW 179
C++ G+Q+H V+ G I + L+ +Y + G A LF + + TW
Sbjct: 249 CASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTW 308
Query: 180 NLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIK 239
N M+ + + +E L + +M + GV P+ ++F ++ S L+ KQ+H ++++
Sbjct: 309 NCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMR 368
Query: 240 LGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALE 299
+ ++IF+ +AL+D Y C + A+ F DV+ + +++S Y L D+LE
Sbjct: 369 HS-ISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLE 427
Query: 300 LFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMY 359
+F + + P+ + V L + G+++HG++ K GFD+ ++ A+ DMY
Sbjct: 428 MFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDN-RCNIGCAVIDMY 486
Query: 360 GKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLS 419
KC + + +FE R + NS++T S N A+++F M GI D V++S
Sbjct: 487 AKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSIS 546
Query: 420 TTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIP 479
L A + S + G + +H IK S++ +L+D Y++CG+++ + VF+ +
Sbjct: 547 AALSACANLPSESFG--KAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK 604
Query: 480 SPNVVCFTSIMNGYSRNGMGREALDMLEVMIQR-GLIPDKVTFLCVLAGCNHSGMVKEGQ 538
N+V + SI+ +G +++L + M+++ G+ PD++TFL +++ C H G V EG
Sbjct: 605 EKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGV 664
Query: 539 LVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRV 598
F SM YGI ++HY+C++D+ GRAG L +A E ++ P D +W +LL +CR+
Sbjct: 665 RFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRL 724
Query: 599 HGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQIRETALARKLTRDIGHS 658
H N + ++ LM+L+P + Y +SN ++ E+E ++R R++ + G+S
Sbjct: 725 HKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYS 784
Query: 659 LIEVN 663
IE+N
Sbjct: 785 WIEIN 789
Score = 216 bits (550), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 145/561 (25%), Positives = 273/561 (48%), Gaps = 12/561 (2%)
Query: 45 YSSNRTIDDFVKSGHLNSAKKLFDEMPAR--DMVTYNLLISGCGKFRHPKQALYLYDEMV 102
Y+ R + + G + K+F + R + +N +IS + QAL Y +M+
Sbjct: 71 YTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKML 130
Query: 103 SHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSV 162
G+ STF ++ C + + V SLG N ++ S L+ Y+ G
Sbjct: 131 CFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKID 190
Query: 163 RALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCS 222
LFD + +++ WN+ML + + D V++ ++ M+ + + PN ++F ++ C+
Sbjct: 191 VPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCA 250
Query: 223 IGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWN 282
+L+D G QLH V+ G VD + N+L+ YS CG +A K F + D ++WN
Sbjct: 251 SKLLIDLGVQLHGLVVVSG-VDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWN 309
Query: 283 SIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTK- 341
++S Y L+ ++L F+ M P +F L S+ N+ + KQIH Y+ +
Sbjct: 310 CMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRH 369
Query: 342 -LGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAV 400
+ D + + SAL D Y KC + + +F + ++++ LH+G D++
Sbjct: 370 SISLD---IFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSL 426
Query: 401 EMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMD 460
EMF ++V I +E+TL + L + + + LG R LH IK GF++ + C+++D
Sbjct: 427 EMFRWLVKVKISPNEITLVSILPVIGILLALKLG--RELHGFIIKKGFDNRCNIGCAVID 484
Query: 461 AYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVT 520
Y++CG + L++++FE++ ++V + S++ +++ A+D+ M G+ D V+
Sbjct: 485 MYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVS 544
Query: 521 FLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQT 580
L+ C + G+ + M + + +D S +IDM + G L A + +T
Sbjct: 545 ISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVF-KT 602
Query: 581 PGGGDCMMWSSLLRSCRVHGN 601
+ + W+S++ +C HG
Sbjct: 603 MKEKNIVSWNSIIAACGNHGK 623
Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 121/493 (24%), Positives = 238/493 (48%), Gaps = 12/493 (2%)
Query: 113 FSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELP 172
S +L CSN +G Q+H ++ + Y ++ +Y G +F L
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 173 ER--NLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEG 230
R ++ WN ++ +F ++ L Y KM GV P+ +F +V+ C + + +G
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC-VALKNFKG 156
Query: 231 KQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYAD 290
S + +D N FVA++L+ Y G + K FD + D + WN +++ YA
Sbjct: 157 IDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK 216
Query: 291 YDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFD-HGSV 349
+ ++ F M++ + P+ +F L+ + + G Q+HG V G D GS
Sbjct: 217 CGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGS- 275
Query: 350 HVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDE 409
++++L MY KC + + +F N +++ + SG +++++ F M+
Sbjct: 276 -IKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISS 334
Query: 410 GIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIE 469
G+ D +T S+ L SVS NL C+ +HC ++ +I ++ +L+DAY +C +
Sbjct: 335 GVLPDAITFSSLLP--SVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVS 392
Query: 470 LSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCN 529
++ +F + S +VV FT++++GY NG+ ++L+M +++ + P+++T + +L
Sbjct: 393 MAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIG 452
Query: 530 HSGMVKEGQLVFNSMKSVYGIDADRQHYSC-MIDMLGRAGILDKAEELLQQTPGGGDCMM 588
+K G+ + + G D +R + C +IDM + G ++ A E+ ++ D +
Sbjct: 453 ILLALKLGRELHGFIIK-KGFD-NRCNIGCAVIDMYAKCGRMNLAYEIFERL-SKRDIVS 509
Query: 589 WSSLLRSCRVHGN 601
W+S++ C N
Sbjct: 510 WNSMITRCAQSDN 522
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 295 bits (756), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 182/638 (28%), Positives = 342/638 (53%), Gaps = 10/638 (1%)
Query: 25 PLSSSLLLDSYCQPNPQLNIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISG 84
P+S+ + + L+++++N ++ +VK+G A LFDEMP R+ V++ L G
Sbjct: 65 PISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQG 124
Query: 85 CGKFRHPKQALYLYDEMVSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLN 144
+ + LY + G + + F+S L + + +H ++ LG+ N
Sbjct: 125 YA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSN 180
Query: 145 LYIGSPLVDLYMRMGPSVRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKA 204
++G+ L++ Y G A +F+ + +++ W ++ + E ++ L++ + M+
Sbjct: 181 AFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRM 240
Query: 205 EGVEPNGLSFCYMVRGCSIGM-LLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSL 263
G PN +F ++ SIG+ D K +H ++K +V ++ V L+ Y+ G +
Sbjct: 241 AGFMPNNYTFDTALKA-SIGLGAFDFAKGVHGQILKTCYV-LDPRVGVGLLQLYTQLGDM 298
Query: 264 IEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFA 323
+A K F+ +P +DV+ W+ +++ + +A++LF RM+ P+ + LN
Sbjct: 299 SDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGC 358
Query: 324 SRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECC 383
+ G+Q+HG V K+GFD ++V +AL D+Y KC ++++V +F ++
Sbjct: 359 AIGKCSGLGEQLHGLVVKVGFDL-DIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSW 417
Query: 384 NSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCA 443
N+++ + G A MF + + + EVT S+ L A + AS +LG +H A
Sbjct: 418 NTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGV--QVHGLA 475
Query: 444 IKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREAL 503
IK+ +AVS SL+D Y++CG I+ + VF ++ + +V + ++++GYS +G+GR+AL
Sbjct: 476 IKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQAL 535
Query: 504 DMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDM 563
+L++M R P+ +TFL VL+GC+++G++ +GQ F SM +GI+ +HY+CM+ +
Sbjct: 536 RILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRL 595
Query: 564 LGRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHGNEIIGRRVANILMELEPVDFAVY 623
LGR+G LDKA +L++ P M+W ++L + NE RR A ++++ P D A Y
Sbjct: 596 LGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATY 655
Query: 624 SQVSNFYSEIGEFEVSMQIRETALARKLTRDIGHSLIE 661
VSN Y+ ++ IR++ + ++ G S IE
Sbjct: 656 VLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIE 693
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 181/622 (29%), Positives = 325/622 (52%), Gaps = 13/622 (2%)
Query: 54 FVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTF 113
+ K L A++LFD MP R+++++N LISG + +QA+ L+ E +K T+
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 114 SSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPE 173
+ L C G +H V+ G +++ + L+D+Y + G +A+ LFD E
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 174 RNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGM---LLDEG 230
R+ +WN ++ + + +E L + KM +G+ + +++ C I + +++G
Sbjct: 212 RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKG 271
Query: 231 KQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYAD 290
+H + KLG ++ +I V AL+D Y+ GSL EA K F +P +V+++N+++S +
Sbjct: 272 MAIHCYTAKLG-MEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQ 330
Query: 291 YDLIFD-----ALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFD 345
D I D A +LF MQ PS +F L S + +G+QIH + K F
Sbjct: 331 MDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQ 390
Query: 346 HGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGF 405
+ SAL ++Y E + F S + + S++ + + ++ A ++F
Sbjct: 391 SDEF-IGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQ 449
Query: 406 MVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRC 465
+ I +E T+S + A + A+ L S + AIKSG ++ +V S + Y++
Sbjct: 450 LFSSHIRPEEYTVSLMMSACADFAA--LSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKS 507
Query: 466 GHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVL 525
G++ L++QVF ++ +P+V ++++++ +++G EAL++ E M G+ P++ FL VL
Sbjct: 508 GNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVL 567
Query: 526 AGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGD 585
C H G+V +G F MK+ Y I+ + +H++C++D+LGR G L AE L+ +
Sbjct: 568 IACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDH 627
Query: 586 CMMWSSLLRSCRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQIRET 645
+ W +LL SCRV+ + +IG+RVA LMELEP Y + N Y++ G + ++RE
Sbjct: 628 PVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVREL 687
Query: 646 ALARKLTRDIGHSLIEV-NSCH 666
R + ++ S I + N H
Sbjct: 688 MRDRGVKKEPALSWIVIGNQTH 709
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 142/285 (49%), Gaps = 6/285 (2%)
Query: 41 QLNIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKF-----RHPKQAL 95
+ +I +D + K+G L A KLF MP++++VTYN +ISG + +A
Sbjct: 284 EFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAF 343
Query: 96 YLYDEMVSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLY 155
L+ +M G++ S STFS VL CS A G QIH + F + +IGS L++LY
Sbjct: 344 KLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELY 403
Query: 156 MRMGPSVRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFC 215
MG + + F ++++A+W M+ + + + ++ ++ + + P +
Sbjct: 404 ALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVS 463
Query: 216 YMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPV 275
M+ C+ L G+Q+ + IK G +D V + + Y+ G++ A + F +
Sbjct: 464 LMMSACADFAALSSGEQIQGYAIKSG-IDAFTSVKTSSISMYAKSGNMPLANQVFIEVQN 522
Query: 276 DDVISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFL 320
DV ++++++S A + +AL +F M+ +P+ ++F+ L
Sbjct: 523 PDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVL 567
Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 125/292 (42%), Gaps = 9/292 (3%)
Query: 6 LLPRVRTITTLAPTCTSIVPLSSSLLLDSY-CQPNPQLNIYSSNRTIDDFVKSGHLNSAK 64
L P T + + C++ L + + C+ N Q + + + I+ + G
Sbjct: 354 LEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGM 413
Query: 65 KLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVLSVCSNAG 124
+ F +D+ ++ +I + + A L+ ++ S I+ T S ++S C++
Sbjct: 414 QCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFA 473
Query: 125 FYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATWNLMLR 184
+ G QI + G + + + +Y + G A +F E+ ++AT++ M+
Sbjct: 474 ALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMIS 533
Query: 185 AFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVD 244
+ + +E L ++ MK G++PN +F ++ C G L+ +G + + ++
Sbjct: 534 SLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRIN 593
Query: 245 VNIFVANALVDFYSACGSLIEAKK---SFDFIPVDDVISWNSIVS---IYAD 290
N LVD G L +A+ S F D ++W +++S +Y D
Sbjct: 594 PNEKHFTCLVDLLGRTGRLSDAENLILSSGF--QDHPVTWRALLSSCRVYKD 643
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 4/185 (2%)
Query: 409 EGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHI 468
+ LD + + S S LG +L H IKS + + +L++ Y +C +
Sbjct: 41 KNTALDSEGYKILFQTAAKSGSVVLG--KLAHGHMIKSSLNPCLYLLNNLLNMYCKCREL 98
Query: 469 ELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGC 528
+ Q+F+++P N++ F S+++GY++ G +A+++ + L DK T+ L C
Sbjct: 99 GFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFC 158
Query: 529 NHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMM 588
+ G+L+ + + V G+ + +IDM + G LD+A L + D +
Sbjct: 159 GERCDLDLGELL-HGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVS 216
Query: 589 WSSLL 593
W+SL+
Sbjct: 217 WNSLI 221
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 292 bits (747), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 187/659 (28%), Positives = 346/659 (52%), Gaps = 14/659 (2%)
Query: 11 RTITTLAPTCTSIVPLSSSLLLDSYCQPNPQL---NIYSSNRTIDDFVKSGHLNSAKKLF 67
RT+ ++ C L +D++ + N + N+ S + + G L A ++F
Sbjct: 95 RTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLM--YTNCGDLKEASRVF 152
Query: 68 DEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVLSVCSNAGFYT 127
DE+ + +N+L++ K ++ L+ +M+S G++ + TFS V S+
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 128 EGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATWNLMLRAFC 187
G Q+H +L GFG +G+ LV Y++ A +FDE+ ER++ +WN ++ +
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 188 ELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNI 247
++ L ++ +M G+E + + + GC+ L+ G+ +HS +K + +
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 248 FVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFFRMQLC 307
F N L+D YS CG L AK F + V+S+ S+++ YA L +A++LF M+
Sbjct: 333 F-CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 391
Query: 308 RKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTK--LGFDHGSVHVQSALTDMYGKCNVI 365
P + + LN +R + GK++H ++ + LGFD + V +AL DMY KC +
Sbjct: 392 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFD---IFVSNALMDMYAKCGSM 448
Query: 366 ESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEG-IGLDEVTLSTTLKA 424
+ + VF + + N+++ + +A+ +F +++E DE T++ L A
Sbjct: 449 QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPA 508
Query: 425 LSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVV 484
+ ++ + G R +H +++G+ S+ V+ SL+D Y++CG + L+H +F+ I S ++V
Sbjct: 509 CASLSAFDKG--REIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLV 566
Query: 485 CFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSM 544
+T ++ GY +G G+EA+ + M Q G+ D+++F+ +L C+HSG+V EG FN M
Sbjct: 567 SWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM 626
Query: 545 KSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHGNEII 604
+ I+ +HY+C++DML R G L KA ++ P D +W +LL CR+H + +
Sbjct: 627 RHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKL 686
Query: 605 GRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQIRETALARKLTRDIGHSLIEVN 663
+VA + ELEP + Y ++N Y+E ++E ++R+ R L ++ G S IE+
Sbjct: 687 AEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIK 745
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 290 bits (743), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 174/621 (28%), Positives = 315/621 (50%), Gaps = 68/621 (10%)
Query: 110 ASTFSSVLSVCSNAGFYTEGIQ-IHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLF 168
+S F+ +L C + ++ +H V+ GF ++I + L+D Y + G +F
Sbjct: 19 SSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVF 78
Query: 169 DELPERNL-------------------------------ATWNLMLRAFCELSRPDEVLR 197
D++P+RN+ TWN M+ F + R +E L
Sbjct: 79 DKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALC 138
Query: 198 MYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFY 257
+ M EG N SF ++ CS +++G Q+HS + K ++ ++++ +ALVD Y
Sbjct: 139 YFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLS-DVYIGSALVDMY 197
Query: 258 SACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFV 317
S CG++ +A++ FD + +V+SWNS+++ + +AL++F M R P +
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 318 EFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAP- 376
++ + + G+++HG V K + + +A DMY KC+ I+ + +F+S P
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Query: 377 ------------------------------GRSLECCNSLMTSLLHSGNIKDAVEMFGFM 406
R++ N+L+ +G ++A+ +F +
Sbjct: 318 RNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL 377
Query: 407 VDEGIGLDEVTLSTTLKALSVSASANLGSCR----LLHCCAIKSGFESNIAVSCSLMDAY 462
E + + + LKA + A +LG L H +SG E +I V SL+D Y
Sbjct: 378 KRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMY 437
Query: 463 SRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFL 522
+CG +E + VF K+ + V + +++ G+++NG G EAL++ M++ G PD +T +
Sbjct: 438 VKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMI 497
Query: 523 CVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPG 582
VL+ C H+G V+EG+ F+SM +G+ R HY+CM+D+LGRAG L++A+ ++++ P
Sbjct: 498 GVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPM 557
Query: 583 GGDCMMWSSLLRSCRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQI 642
D ++W SLL +C+VH N +G+ VA L+E+EP + Y +SN Y+E+G++E M +
Sbjct: 558 QPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNV 617
Query: 643 RETALARKLTRDIGHSLIEVN 663
R++ +T+ G S I++
Sbjct: 618 RKSMRKEGVTKQPGCSWIKIQ 638
Score = 189 bits (480), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 131/494 (26%), Positives = 227/494 (45%), Gaps = 50/494 (10%)
Query: 40 PQLNIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYD 99
PQ NIY+ N + K G L+ A LF MP RD T+N ++SG + ++AL +
Sbjct: 82 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA 141
Query: 100 EMVSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMG 159
M G + +F+SVLS CS +G+Q+H + F ++YIGS LVD+Y + G
Sbjct: 142 MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCG 201
Query: 160 PSVRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVR 219
A +FDE+ +RN+ +WN ++ F + E L ++ M VEP+ ++ ++
Sbjct: 202 NVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVIS 261
Query: 220 GCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVI 279
C+ + G+++H V+K + +I ++NA VD Y+ C + EA+ FD +P+ +VI
Sbjct: 262 ACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVI 321
Query: 280 -------------------------------SWNSIVSIYADYDLIFDALELFFRMQLCR 308
SWN++++ Y +AL LF ++
Sbjct: 322 AETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRES 381
Query: 309 KRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGF-----DHGSVHVQSALTDMYGKCN 363
P+ SF L + ++ G Q H +V K GF + + V ++L DMY KC
Sbjct: 382 VCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCG 441
Query: 364 VIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLK 423
+E VF R N+++ +G +A+E+F M++ G D +T+ L
Sbjct: 442 CVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLS 501
Query: 424 ALSVSASANLGS------CRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEK 477
A + G R ++ + +C ++D R G +E + + E+
Sbjct: 502 ACGHAGFVEEGRHYFSSMTRDFGVAPLRDHY------TC-MVDLLGRAGFLEEAKSMIEE 554
Query: 478 IP-SPNVVCFTSIM 490
+P P+ V + S++
Sbjct: 555 MPMQPDSVIWGSLL 568
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 124/254 (48%), Gaps = 7/254 (2%)
Query: 40 PQLNIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYD 99
P N+ + I + + +A+ +F +M R++V++N LI+G + ++AL L+
Sbjct: 316 PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC 375
Query: 100 EMVSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGL------NLYIGSPLVD 153
+ + + +F+++L C++ G+Q H VL GF ++++G+ L+D
Sbjct: 376 LLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLID 435
Query: 154 LYMRMGPSVRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLS 213
+Y++ G +F ++ ER+ +WN M+ F + +E L ++ +M G +P+ ++
Sbjct: 436 MYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHIT 495
Query: 214 FCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFI 273
++ C ++EG+ S + + V +VD G L EAK + +
Sbjct: 496 MIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555
Query: 274 PVD-DVISWNSIVS 286
P+ D + W S+++
Sbjct: 556 PMQPDSVIWGSLLA 569
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 37 QPNPQLNIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALY 96
Q + +I+ N ID +VK G + +F +M RD V++N +I G + + +AL
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALE 479
Query: 97 LYDEMVSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPL----- 151
L+ EM+ G K T VLS C +AGF EG + + ++ FG+ +PL
Sbjct: 480 LFREMLESGEKPDHITMIGVLSACGHAGFVEEG-RHYFSSMTRDFGV-----APLRDHYT 533
Query: 152 --VDLYMRMGPSVRALDLFDELP-ERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVE 208
VDL R G A + +E+P + + W +L A C++ R + L Y K VE
Sbjct: 534 CMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAA-CKVHR-NITLGKYVAEKLLEVE 591
Query: 209 PN 210
P+
Sbjct: 592 PS 593
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 290 bits (743), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 160/537 (29%), Positives = 299/537 (55%), Gaps = 13/537 (2%)
Query: 131 QIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATWNLMLRAFCELS 190
QIH R+L LG + ++ + L+ G A +FD+LP + WN ++R + +
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98
Query: 191 RPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVA 250
+ L MY+ M+ V P+ +F ++++ CS L G+ +H+ V +LG+ D ++FV
Sbjct: 99 HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGF-DADVFVQ 157
Query: 251 NALVDFYSACGSLIEAKKSFDFIPVDD--VISWNSIVSIYADYDLIFDALELFFRMQLCR 308
N L+ Y+ C L A+ F+ +P+ + ++SW +IVS YA +ALE+F +M+
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 309 KRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESS 368
+P + V LN + ++ G+ IH V K+G + + +L MY KC + ++
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLE-IEPDLLISLNTMYAKCGQVATA 276
Query: 369 VAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLKALSVS 428
+F+ +L N++++ +G ++A++MF M+++ + D +++++ ++S
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS-----AIS 331
Query: 429 ASANLGS---CRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVC 485
A A +GS R ++ +S + ++ +S +L+D +++CG +E + VF++ +VV
Sbjct: 332 ACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVV 391
Query: 486 FTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMK 545
+++++ GY +G REA+ + M + G+ P+ VTFL +L CNHSGMV+EG FN M
Sbjct: 392 WSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA 451
Query: 546 SVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHGNEIIG 605
+ I+ +QHY+C+ID+LGRAG LD+A E+++ P +W +LL +C+ H + +G
Sbjct: 452 D-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELG 510
Query: 606 RRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQIRETALARKLTRDIGHSLIEV 662
A L ++P + Y Q+SN Y+ ++ ++R + L +D+G S +EV
Sbjct: 511 EYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEV 567
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 215/438 (49%), Gaps = 7/438 (1%)
Query: 58 GHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVL 117
G + A+++FD++P + +N +I G + H + AL +Y M + + TF +L
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 118 SVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFD--ELPERN 175
CS G +H +V LGF ++++ + L+ LY + A +F+ LPER
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186
Query: 176 LATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHS 235
+ +W ++ A+ + P E L ++++M+ V+P+ ++ ++ + L +G+ +H+
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 236 HVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIF 295
V+K+G +++ + +L Y+ CG + AK FD + ++I WN+++S YA
Sbjct: 247 SVVKMG-LEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 296 DALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSAL 355
+A+++F M RP S ++ ++ G++ + ++ YV + + V + SAL
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDY-RDDVFISSAL 364
Query: 356 TDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDE 415
DM+ KC +E + VF+ R + ++++ G ++A+ ++ M G+ ++
Sbjct: 365 IDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPND 424
Query: 416 VTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVF 475
VT L A + S G K + +C ++D R GH++ +++V
Sbjct: 425 VTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQ-HYAC-VIDLLGRAGHLDQAYEVI 482
Query: 476 EKIP-SPNVVCFTSIMNG 492
+ +P P V + ++++
Sbjct: 483 KCMPVQPGVTVWGALLSA 500
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 159/336 (47%), Gaps = 4/336 (1%)
Query: 43 NIYSSNRTIDDFVKSGHLNSAKKLFD--EMPARDMVTYNLLISGCGKFRHPKQALYLYDE 100
+++ N I + K L SA+ +F+ +P R +V++ ++S + P +AL ++ +
Sbjct: 153 DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQ 212
Query: 101 MVSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGP 160
M +K SVL+ + +G IH V+ +G + + L +Y + G
Sbjct: 213 MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQ 272
Query: 161 SVRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRG 220
A LFD++ NL WN M+ + + E + M+++M + V P+ +S +
Sbjct: 273 VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISA 332
Query: 221 CSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVIS 280
C+ L++ + ++ +V + + D ++F+++AL+D ++ CGS+ A+ FD DV+
Sbjct: 333 CAQVGSLEQARSMYEYVGRSDYRD-DVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVV 391
Query: 281 WNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVT 340
W++++ Y + +A+ L+ M+ P+ +F+ L + +G V G +
Sbjct: 392 WSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA 451
Query: 341 KLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAP 376
+ H + + D+ G+ ++ + V + P
Sbjct: 452 DHKINPQQQHY-ACVIDLLGRAGHLDQAYEVIKCMP 486
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 118/244 (48%), Gaps = 22/244 (9%)
Query: 54 FVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTF 113
+ K G + +AK LFD+M + +++ +N +ISG K + ++A+ ++ EM++ ++ +
Sbjct: 267 YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISI 326
Query: 114 SSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPE 173
+S +S C+ G + ++ V + +++I S L+D++ + G A +FD +
Sbjct: 327 TSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLD 386
Query: 174 RNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQL 233
R++ W+ M+ + R E + +Y M+ GV PN ++F ++ C+
Sbjct: 387 RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACN----------- 435
Query: 234 HSHVIKLGWVDVNIFVANAL----------VDFYSACGSLIEAKKSFDFIPVDD-VISWN 282
HS +++ GW N + + +D G L +A + +PV V W
Sbjct: 436 HSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWG 495
Query: 283 SIVS 286
+++S
Sbjct: 496 ALLS 499
Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 1/163 (0%)
Query: 419 STTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKI 478
S + A + ++ + + +H + G + + + L+ A S G I + QVF+ +
Sbjct: 20 SDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDL 79
Query: 479 PSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQ 538
P P + + +I+ GYSRN ++AL M M + PD TF +L C+ ++ G+
Sbjct: 80 PRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGR 139
Query: 539 LVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTP 581
V + + G DAD + +I + + L A + + P
Sbjct: 140 FVHAQVFRL-GFDADVFVQNGLIALYAKCRRLGSARTVFEGLP 181
Score = 36.6 bits (83), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 39 NPQLNIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVT-YNLLISGCGKFRHPKQALYL 97
NPQ Y+ ID ++GHL+ A ++ MP + VT + L+S C K RH + Y
Sbjct: 456 NPQQQHYAC--VIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYA 513
Query: 98 YDEMVS 103
++ S
Sbjct: 514 AQQLFS 519
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 289 bits (739), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 170/626 (27%), Positives = 329/626 (52%), Gaps = 11/626 (1%)
Query: 45 YSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSH 104
+ + + F + G ++ A ++F+ + ++ V Y+ ++ G K +AL + M
Sbjct: 70 FFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD 129
Query: 105 GIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRA 164
++ F+ +L VC + G +IH ++ GF L+L+ + L ++Y + A
Sbjct: 130 DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA 189
Query: 165 LDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIG 224
+FD +PER+L +WN ++ + + L M M E ++P+ ++ ++ S
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249
Query: 225 MLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSI 284
L+ GK++H + ++ G+ D + ++ ALVD Y+ CGSL A++ FD + +V+SWNS+
Sbjct: 250 RLISVGKEIHGYAMRSGF-DSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSM 308
Query: 285 VSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGF 344
+ Y + +A+ +F +M +P+ S + L+ + G++ G+ IH +LG
Sbjct: 309 IDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGL 368
Query: 345 DHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFG 404
D +V V ++L MY KC ++++ ++F R+L N+++ +G DA+ F
Sbjct: 369 DR-NVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFS 427
Query: 405 FMVDEGIGLDE---VTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDA 461
M + D V++ T + LS++ A + +H ++S + N+ V+ +L+D
Sbjct: 428 QMRSRTVKPDTFTYVSVITAIAELSITHHA-----KWIHGVVMRSCLDKNVFVTTALVDM 482
Query: 462 YSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTF 521
Y++CG I ++ +F+ + +V + ++++GY +G G+ AL++ E M + + P+ VTF
Sbjct: 483 YAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTF 542
Query: 522 LCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTP 581
L V++ C+HSG+V+ G F MK Y I+ HY M+D+LGRAG L++A + + Q P
Sbjct: 543 LSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMP 602
Query: 582 GGGDCMMWSSLLRSCRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQ 641
++ ++L +C++H N + A L EL P D + ++N Y +E Q
Sbjct: 603 VKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQ 662
Query: 642 IRETALARKLTRDIGHSLIEV-NSCH 666
+R + L + L + G S++E+ N H
Sbjct: 663 VRVSMLRQGLRKTPGCSMVEIKNEVH 688
Score = 175 bits (444), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 192/393 (48%), Gaps = 2/393 (0%)
Query: 42 LNIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEM 101
L++++ + + K +N A+K+FD MP RD+V++N +++G + + AL + M
Sbjct: 168 LDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSM 227
Query: 102 VSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPS 161
+K S T SVL S + G +IH + GF + I + LVD+Y + G
Sbjct: 228 CEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSL 287
Query: 162 VRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGC 221
A LFD + ERN+ +WN M+ A+ + P E + ++ KM EGV+P +S + C
Sbjct: 288 ETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHAC 347
Query: 222 SIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISW 281
+ L+ G+ +H ++LG +D N+ V N+L+ Y C + A F + ++SW
Sbjct: 348 ADLGDLERGRFIHKLSVELG-LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSW 406
Query: 282 NSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTK 341
N+++ +A DAL F +M+ +P ++V + + + K IHG V +
Sbjct: 407 NAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMR 466
Query: 342 LGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVE 401
D +V V +AL DMY KC I + +F+ R + N+++ G K A+E
Sbjct: 467 SCLDK-NVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALE 525
Query: 402 MFGFMVDEGIGLDEVTLSTTLKALSVSASANLG 434
+F M I + VT + + A S S G
Sbjct: 526 LFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG 558
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 43 NIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMV 102
N++ + +D + K G + A+ +FD M R + T+N +I G G K AL L++EM
Sbjct: 472 NVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQ 531
Query: 103 SHGIKESASTFSSVLSVCSNAGFYTEGIQ---IHCRVLSLGFGLNLYIGSPLVDLYMRMG 159
IK + TF SV+S CS++G G++ + S+ ++ Y +VDL R G
Sbjct: 532 KGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHY--GAMVDLLGRAG 589
Query: 160 PSVRALDLFDELP 172
A D ++P
Sbjct: 590 RLNEAWDFIMQMP 602
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 285 bits (728), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 170/599 (28%), Positives = 290/599 (48%), Gaps = 25/599 (4%)
Query: 77 TYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRV 136
+NL I P ++L L+ EM G + + TF V C+ +H +
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 137 LSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATWNLMLRAFCELSRPDEVL 196
+ F ++++G+ VD++++ A +F+ +PER+ TWN ML FC+ D+
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAF 138
Query: 197 RMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDF 256
++ +M+ + P+ ++ +++ S L + +H+ I+LG VDV + VAN +
Sbjct: 139 SLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLG-VDVQVTVANTWIST 197
Query: 257 YSACGSLIEAKKSFDFIPVDD--VISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIR 314
Y CG L AK F+ I D V+SWNS+ Y+ + FDA L+ M +P +
Sbjct: 198 YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLS 257
Query: 315 SFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFES 374
+F+ + G+ IH + LG D + + MY K S+ +F+
Sbjct: 258 TFINLAASCQNPETLTQGRLIHSHAIHLGTDQ-DIEAINTFISMYSKSEDTCSARLLFDI 316
Query: 375 APGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLKALS-------- 426
R+ +++ G++ +A+ +F M+ G D VTL + +
Sbjct: 317 MTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG 376
Query: 427 --VSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVV 484
+ A A++ C+ N+ + +L+D YS+CG I + +F+ P VV
Sbjct: 377 KWIDARADIYGCK-----------RDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVV 425
Query: 485 CFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSM 544
+T+++ GY+ NG+ EAL + MI P+ +TFL VL C HSG +++G F+ M
Sbjct: 426 TWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIM 485
Query: 545 KSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHGNEII 604
K VY I HYSCM+D+LGR G L++A EL++ D +W +LL +C++H N I
Sbjct: 486 KQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKI 545
Query: 605 GRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQIRETALARKLTRDIGHSLIEVN 663
+ A L LEP A Y +++N Y+ G ++ +IR R + + G S+I+VN
Sbjct: 546 AEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVN 604
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/568 (21%), Positives = 247/568 (43%), Gaps = 43/568 (7%)
Query: 8 PRVRTITTLAPTCTSIVPLSSSLLLDSYCQPNP-QLNIYSSNRTIDDFVKSGHLNSAKKL 66
P T +A C + + ++ ++ +P +++ T+D FVK ++ A K+
Sbjct: 50 PNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKV 109
Query: 67 FDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVLSVCSNAGFY 126
F+ MP RD T+N ++SG + H +A L+ EM + I + T +++ S
Sbjct: 110 FERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSL 169
Query: 127 TEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELP--ERNLATWNLMLR 184
+H + LG + + + + + Y + G A +F+ + +R + +WN M +
Sbjct: 170 KLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFK 229
Query: 185 AFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVD 244
A+ + +Y M E +P+ +F + C L +G+ +HSH I LG D
Sbjct: 230 AYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLG-TD 288
Query: 245 VNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFFRM 304
+I N + YS A+ FD + +SW ++S YA+ + +AL LF M
Sbjct: 289 QDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAM 348
Query: 305 QLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNV 364
++P + + + ++ + G++ GK I G +V + +AL DMY KC
Sbjct: 349 IKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGS 408
Query: 365 IESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLKA 424
I + +F++ P +++ +++ +G +A+++F M+D + +T L+A
Sbjct: 409 IHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQA 468
Query: 425 LSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVV 484
+ H +++ G+E + + QV+ SP +
Sbjct: 469 CA-------------HSGSLEKGWE-----------------YFHIMKQVYN--ISPGLD 496
Query: 485 CFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSM 544
++ +++ R G EAL+++ M + PD + +L C VK + +
Sbjct: 497 HYSCMVDLLGRKGKLEEALELIRNMSAK---PDAGIWGALLNACKIHRNVKIAE---QAA 550
Query: 545 KSVYGIDADRQH-YSCMIDMLGRAGILD 571
+S++ ++ Y M ++ AG+ D
Sbjct: 551 ESLFNLEPQMAAPYVEMANIYAAAGMWD 578
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 285 bits (728), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 191/667 (28%), Positives = 340/667 (50%), Gaps = 19/667 (2%)
Query: 8 PRVRTITTLAPTCTSIVPLSSSLLLDSYCQPNPQ---LNIYSSNRTIDDFVKSGHLNSAK 64
P T +L T S+ LL C +++ + + F KSG L+ A+
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYAR 263
Query: 65 KLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVLSVCSNAG 124
K+F++M R+ VT N L+ G + + ++A L+ +M S I S ++ +LS
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM-IDVSPESYVILLSSFPEYS 322
Query: 125 FYTE-----GIQIHCRVLSLGF-GLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLAT 178
E G ++H V++ G + IG+ LV++Y + G A +F + +++ +
Sbjct: 323 LAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVS 382
Query: 179 WNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVI 238
WN M+ + E + Y M+ + P + + C+ G+Q+H +
Sbjct: 383 WNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESL 442
Query: 239 KLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDL-IFDA 297
KLG +D+N+ V+NAL+ Y+ G L E +K F +P D +SWNSI+ A + + +A
Sbjct: 443 KLG-IDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEA 501
Query: 298 LELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTD 357
+ F Q ++ + +F L+ S GKQIHG K + ++AL
Sbjct: 502 VVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEAT-TENALIA 560
Query: 358 MYGKCNVIESSVAVFES-APGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEV 416
YGKC ++ +F A R NS+++ +H+ + A+++ FM+ G LD
Sbjct: 561 CYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSF 620
Query: 417 TLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFE 476
+T L A + A+ G +H C++++ ES++ V +L+D YS+CG ++ + + F
Sbjct: 621 MYATVLSAFASVATLERG--MEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFN 678
Query: 477 KIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIP-DKVTFLCVLAGCNHSGMVK 535
+P N + S+++GY+R+G G EAL + E M G P D VTF+ VL+ C+H+G+++
Sbjct: 679 TMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLE 738
Query: 536 EGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLLRS 595
EG F SM YG+ +H+SCM D+LGRAG LDK E+ +++ P + ++W ++L +
Sbjct: 739 EGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGA 798
Query: 596 -CRVHGNEI-IGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQIRETALARKLTR 653
CR +G + +G++ A +L +LEP + Y + N Y+ G +E ++ R+ + +
Sbjct: 799 CCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKK 858
Query: 654 DIGHSLI 660
+ G+S +
Sbjct: 859 EAGYSWV 865
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 156/643 (24%), Positives = 310/643 (48%), Gaps = 33/643 (5%)
Query: 43 NIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMV 102
++Y N I+ ++++G SA+K+FDEMP R+ V++ ++SG + K+AL +MV
Sbjct: 35 DVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMV 94
Query: 103 SHGIKESASTFSSVLSVCSNAGFY--TEGIQIHCRVLSLGFGLNLYIGSPLVDLYMR-MG 159
GI + F SVL C G G QIH + L + ++ + + L+ +Y + +G
Sbjct: 95 KEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIG 154
Query: 160 PSVRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMV- 218
AL F ++ +N +WN ++ + + R+++ M+ +G P +F +V
Sbjct: 155 SVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVT 214
Query: 219 RGCSIG----MLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIP 274
CS+ LL+ Q+ + K G + ++FV + LV ++ GSL A+K F+ +
Sbjct: 215 TACSLTEPDVRLLE---QIMCTIQKSGLL-TDLFVGSGLVSAFAKSGSLSYARKVFNQME 270
Query: 275 VDDVISWNSIVSIYADYDLIFDALELFFRMQ-LCRKRPS-----IRSFVEFLNFASRTGN 328
+ ++ N ++ +A +LF M + P + SF E+ + A G
Sbjct: 271 TRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEY-SLAEEVG- 328
Query: 329 VYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMT 388
+ G+++HG+V G V + + L +MY KC I + VF + NS++T
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT 388
Query: 389 SLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGF 448
L +G +AVE + M I TL ++L + + A LG + +H ++K G
Sbjct: 389 GLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLG--QQIHGESLKLGI 446
Query: 449 ESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEV 508
+ N++VS +LM Y+ G++ ++F +P + V + SI+ +R+ + +
Sbjct: 447 DLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFL 506
Query: 509 MIQR-GLIPDKVTFLCVLAGCNHSGMVKEGQLVFN-SMKSVYGIDADRQHYSCMIDMLGR 566
QR G +++TF VL+ + + G+ + ++K+ +A ++ +I G+
Sbjct: 507 NAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTEN--ALIACYGK 564
Query: 567 AGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHGNEIIGRRVANILMELEP---VDFAVY 623
G +D E++ + D + W+S++ S +H NE++ + + + L+ +D +Y
Sbjct: 565 CGEMDGCEKIFSRMAERRDNVTWNSMI-SGYIH-NELLAKALDLVWFMLQTGQRLDSFMY 622
Query: 624 SQVSNFYSEIGEFEVSMQIRETALARKLTRD--IGHSLIEVNS 664
+ V + ++ + E M++ ++ L D +G +L+++ S
Sbjct: 623 ATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYS 665
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 217/474 (45%), Gaps = 20/474 (4%)
Query: 132 IHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATWNLMLRAFCELSR 191
H R+ ++Y+ + L++ Y+ G SV A +FDE+P RN +W ++ +
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 192 PDEVLRMYNKMKAEGVEPNGLSFCYMVRGC----SIGMLLDEGKQLHSHVIKLGWVDVNI 247
E L M EG+ N +F ++R C S+G+L G+Q+H + KL + V+
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILF--GRQIHGLMFKLSYA-VDA 139
Query: 248 FVANALVDFYSAC-GSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFFRMQL 306
V+N L+ Y C GS+ A +F I V + +SWNSI+S+Y+ A +F MQ
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199
Query: 307 CRKRPSIRSFVEFLNFASR--TGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNV 364
RP+ +F + A +V +QI + K G + V S L + K
Sbjct: 200 DGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGL-LTDLFVGSGLVSAFAKSGS 258
Query: 365 IESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMF---GFMVDEGIGLDEVTLSTT 421
+ + VF R+ N LM L+ ++A ++F M+D V L ++
Sbjct: 259 LSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE-SYVILLSS 317
Query: 422 LKALSVSASANLGSCRLLHCCAIKSGF-ESNIAVSCSLMDAYSRCGHIELSHQVFEKIPS 480
S++ L R +H I +G + + + L++ Y++CG I + +VF +
Sbjct: 318 FPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTD 377
Query: 481 PNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLV 540
+ V + S++ G +NG EA++ + M + ++P T + L+ C K GQ +
Sbjct: 378 KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQI 437
Query: 541 F-NSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLL 593
S+K GID + + ++ + G L++ ++ P D + W+S++
Sbjct: 438 HGESLK--LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSII 488
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%)
Query: 434 GSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGY 493
G+ R H K+ + ++ + +L++AY G + +VF+++P N V + I++GY
Sbjct: 18 GAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGY 77
Query: 494 SRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMV 534
SRNG +EAL L M++ G+ ++ F+ VL C G V
Sbjct: 78 SRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>sp|Q9MA95|PP214_ARATH Putative pentatricopeptide repeat-containing protein At3g05240
OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2
Length = 565
Score = 283 bits (725), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/507 (29%), Positives = 282/507 (55%), Gaps = 11/507 (2%)
Query: 164 ALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSI 223
A +F+ + ++ WN M+R + PD+ L Y +M +G P+ +F Y+++ CS
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSG 119
Query: 224 GMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNS 283
+ G +H V+K G+ +VN++V+ L+ Y CG + + F+ IP +V++W S
Sbjct: 120 LRDIQFGSCVHGFVVKTGF-EVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGS 178
Query: 284 IVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLG 343
++S + + + DA+E F MQ + + V+ L R ++ GK HG++ LG
Sbjct: 179 LISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLG 238
Query: 344 FDHG-------SVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNI 396
FD +V + ++L DMY KC + ++ +F+ P R+L NS++T +G+
Sbjct: 239 FDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDA 298
Query: 397 KDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSC 456
++A+ MF M+D GI D+VT + ++A + + LG +H K+GF + A+ C
Sbjct: 299 EEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQS--IHAYVSKTGFVKDAAIVC 356
Query: 457 SLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRG-LI 515
+L++ Y++ G E + + FE + + + +T ++ G + +G G EAL + + M ++G
Sbjct: 357 ALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNAT 416
Query: 516 PDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEE 575
PD +T+L VL C+H G+V+EGQ F M+ ++G++ +HY CM+D+L RAG ++AE
Sbjct: 417 PDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAER 476
Query: 576 LLQQTPGGGDCMMWSSLLRSCRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIGE 635
L++ P + +W +LL C +H N + R+ +++ E E + +Y +SN Y++ G
Sbjct: 477 LVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGR 536
Query: 636 FEVSMQIRETALARKLTRDIGHSLIEV 662
+ IRE+ ++++ + +GHS +E
Sbjct: 537 WADVKLIRESMKSKRVDKVLGHSSVET 563
Score = 162 bits (410), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 204/448 (45%), Gaps = 21/448 (4%)
Query: 59 HLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVLS 118
+L+ A+ +F+ + + +N +I G +P +AL Y EM+ G TF VL
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLK 115
Query: 119 VCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLAT 178
CS G +H V+ GF +N+Y+ + L+ +YM G L +F+++P+ N+
Sbjct: 116 ACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVA 175
Query: 179 WNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVI 238
W ++ F +R + + + +M++ GV+ N ++ C + GK H +
Sbjct: 176 WGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQ 235
Query: 239 KLGW-------VDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADY 291
LG+ V N+ +A +L+D Y+ CG L A+ FD +P ++SWNSI++ Y+
Sbjct: 236 GLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQN 295
Query: 292 DLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHV 351
+AL +F M P +F+ + + G G+ IH YV+K GF + V
Sbjct: 296 GDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIV 355
Query: 352 QSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGI 411
AL +MY K ES+ FE + ++ L G+ +A+ +F M ++G
Sbjct: 356 -CALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGN 414
Query: 412 GL-DEVTLSTTLKA-----LSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRC 465
D +T L A L R LH G E + ++D SR
Sbjct: 415 ATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLH------GLEPTVEHYGCMVDILSRA 468
Query: 466 GHIELSHQVFEKIP-SPNVVCFTSIMNG 492
G E + ++ + +P PNV + +++NG
Sbjct: 469 GRFEEAERLVKTMPVKPNVNIWGALLNG 496
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 161/345 (46%), Gaps = 10/345 (2%)
Query: 41 QLNIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDE 100
++N+Y S + ++ G +N ++F+++P ++V + LISG A+ + E
Sbjct: 139 EVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFRE 198
Query: 101 MVSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGF--------GLNLYIGSPLV 152
M S+G+K + + +L C G H + LGF G N+ + + L+
Sbjct: 199 MQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLI 258
Query: 153 DLYMRMGPSVRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGL 212
D+Y + G A LFD +PER L +WN ++ + + +E L M+ M G+ P+ +
Sbjct: 259 DMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKV 318
Query: 213 SFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDF 272
+F ++R I G+ +H++V K G+V + + ALV+ Y+ G AKK+F+
Sbjct: 319 TFLSVIRASMIQGCSQLGQSIHAYVSKTGFVK-DAAIVCALVNMYAKTGDAESAKKAFED 377
Query: 273 IPVDDVISWNSIVSIYADYDLIFDALELFFRMQ-LCRKRPSIRSFVEFLNFASRTGNVYF 331
+ D I+W ++ A + +AL +F RMQ P +++ L S G V
Sbjct: 378 LEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEE 437
Query: 332 GKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAP 376
G++ + L +V + D+ + E + + ++ P
Sbjct: 438 GQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMP 482
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 129/259 (49%), Gaps = 2/259 (0%)
Query: 30 LLLDSYCQPNPQLNIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFR 89
L D Y Q N+ + ID + K G L +A+ LFD MP R +V++N +I+G +
Sbjct: 237 LGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNG 296
Query: 90 HPKQALYLYDEMVSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGS 149
++AL ++ +M+ GI TF SV+ G G IH V GF + I
Sbjct: 297 DAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVC 356
Query: 150 PLVDLYMRMGPSVRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEG-VE 208
LV++Y + G + A F++L +++ W +++ +E L ++ +M+ +G
Sbjct: 357 ALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNAT 416
Query: 209 PNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKK 268
P+G+++ ++ CS L++EG++ + + L ++ + +VD S G EA++
Sbjct: 417 PDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAER 476
Query: 269 SFDFIPVD-DVISWNSIVS 286
+PV +V W ++++
Sbjct: 477 LVKTMPVKPNVNIWGALLN 495
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 283 bits (723), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 184/628 (29%), Positives = 325/628 (51%), Gaps = 22/628 (3%)
Query: 48 NRTIDDFVKSGHLNSAKKLFDEMP---ARDMVTYNLLISGCGKFRHPKQALYLYDEMVSH 104
N I + KSG A+ +F+ M RD+V+++ +++ G A+ ++ E +
Sbjct: 101 NSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLEL 160
Query: 105 GIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLG-FGLNLYIGSPLVDLYMRMGPSVR 163
G+ + +++V+ CSN+ F G ++ G F ++ +G L+D++++ S
Sbjct: 161 GLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFE 220
Query: 164 -ALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCS 222
A +FD++ E N+ TW LM+ ++ P E +R + M G E + + + C+
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280
Query: 223 IGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSAC---GSLIEAKKSFDFIPVDDVI 279
L GKQLHS I+ G VD V +LVD Y+ C GS+ + +K FD + V+
Sbjct: 281 ELENLSLGKQLHSWAIRSGLVDD---VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVM 337
Query: 280 SWNSIVSIY-ADYDLIFDALELFFRM-QLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHG 337
SW ++++ Y + +L +A+ LF M P+ +F + GKQ+ G
Sbjct: 338 SWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLG 397
Query: 338 YVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIK 397
K G S V +++ M+ K + +E + FES ++L N+ + + N +
Sbjct: 398 QAFKRGLASNS-SVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFE 456
Query: 398 DAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCR---LLHCCAIKSGFESNIAV 454
A ++ + + +G+ T ++ L S AN+GS R +H +K G N V
Sbjct: 457 QAFKLLSEITERELGVSAFTFASLL-----SGVANVGSIRKGEQIHSQVVKLGLSCNQPV 511
Query: 455 SCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGL 514
+L+ YS+CG I+ + +VF + + NV+ +TS++ G++++G L+ MI+ G+
Sbjct: 512 CNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGV 571
Query: 515 IPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAE 574
P++VT++ +L+ C+H G+V EG FNSM + I +HY+CM+D+L RAG+L A
Sbjct: 572 KPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAF 631
Query: 575 ELLQQTPGGGDCMMWSSLLRSCRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIG 634
E + P D ++W + L +CRVH N +G+ A ++EL+P + A Y Q+SN Y+ G
Sbjct: 632 EFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAG 691
Query: 635 EFEVSMQIRETALARKLTRDIGHSLIEV 662
++E S ++R R L ++ G S IEV
Sbjct: 692 KWEESTEMRRKMKERNLVKEGGCSWIEV 719
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 119/533 (22%), Positives = 245/533 (45%), Gaps = 17/533 (3%)
Query: 92 KQALYLYDEMVSHGIKESAS-TFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSP 150
+ A+ D M GI+ S TFSS+L C A + G +H R++ + + +
Sbjct: 43 RGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNS 102
Query: 151 LVDLYMRMGPSVRALDLFDELP---ERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGV 207
L+ LY + G S +A D+F+ + +R++ +W+ M+ + R + ++++ + G+
Sbjct: 103 LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162
Query: 208 EPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVD-FYSACGSLIEA 266
PN + ++R CS + G+ ++K G + ++ V +L+D F S A
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENA 222
Query: 267 KKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRT 326
K FD + +V++W +++ +A+ F M L + + +
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL 282
Query: 327 GNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNV---IESSVAVFESAPGRSLECC 383
N+ GKQ+H + + G V+ +L DMY KC+ ++ VF+ S+
Sbjct: 283 ENLSLGKQLHSWAIRSGLVDD---VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 339
Query: 384 NSLMTSLLHSGNI-KDAVEMFGFMVDEG-IGLDEVTLSTTLKALSVSASANLGSCRLLHC 441
+L+T + + N+ +A+ +F M+ +G + + T S+ KA + +G L
Sbjct: 340 TALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQ- 398
Query: 442 CAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGRE 501
A K G SN +V+ S++ + + +E + + FE + N+V + + ++G RN +
Sbjct: 399 -AFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQ 457
Query: 502 ALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMI 561
A +L + +R L TF +L+G + G +++G+ + + + + G+ ++ + +I
Sbjct: 458 AFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKL-GLSCNQPVCNALI 516
Query: 562 DMLGRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHGNEIIGRRVANILME 614
M + G +D A + + + W+S++ HG I N ++E
Sbjct: 517 SMYSKCGSIDTASRVFNFME-NRNVISWTSMITGFAKHGFAIRVLETFNQMIE 568
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 123/240 (51%), Gaps = 1/240 (0%)
Query: 47 SNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGI 106
+N I FVKS + A++ F+ + +++V+YN + G + + +QA L E+ +
Sbjct: 411 ANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITEREL 470
Query: 107 KESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALD 166
SA TF+S+LS +N G +G QIH +V+ LG N + + L+ +Y + G A
Sbjct: 471 GVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASR 530
Query: 167 LFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGML 226
+F+ + RN+ +W M+ F + VL +N+M EGV+PN +++ ++ CS L
Sbjct: 531 VFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGL 590
Query: 227 LDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVD-DVISWNSIV 285
+ EG + + + + + + +VD G L +A + + +P DV+ W + +
Sbjct: 591 VSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFL 650
>sp|Q9SII7|PP159_ARATH Pentatricopeptide repeat-containing protein At2g17210
OS=Arabidopsis thaliana GN=PCMP-E77 PE=2 SV=2
Length = 736
Score = 283 bits (723), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 179/622 (28%), Positives = 333/622 (53%), Gaps = 23/622 (3%)
Query: 48 NRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIK 107
N D ++K G L S + FD M +RD V++N+++ G + ++ L+ + ++ G +
Sbjct: 86 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE 145
Query: 108 ESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDL 167
+ ST V+ C + F +G +IH V+ GF + + ++ +Y S+ A L
Sbjct: 146 PNTSTLVLVIHACRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCMYAD-SDSLSARKL 202
Query: 168 FDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEG-VEPNGLSFCYMVRGCSIGML 226
FDE+ ER++ +W++++R++ + P L+++ +M E EP+ ++ +++ C++
Sbjct: 203 FDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMED 262
Query: 227 LDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVS 286
+D G+ +H I+ G+ ++FV N+L+D YS + A + FD +++SWNSI++
Sbjct: 263 IDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILA 322
Query: 287 IYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDH 346
+ +ALE+F M + V L K IHG + + G++
Sbjct: 323 GFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYES 382
Query: 347 GSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFM 406
V + S+L D Y C++++ + V +S + + C+++++ L H+G +A+ +F M
Sbjct: 383 NEVAL-SSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM 441
Query: 407 VDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESN-IAVSCSLMDAYSRC 465
D + +T+ + L A SVSA +L + + H AI+ N I+V S++DAY++C
Sbjct: 442 RDTP---NAITVISLLNACSVSA--DLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKC 496
Query: 466 GHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVL 525
G IE++ + F++I N++ +T I++ Y+ NG+ +AL + + M Q+G P+ VT+L L
Sbjct: 497 GAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAAL 556
Query: 526 AGCNHSGMVKEGQLVFNSMKSVYGIDADR----QHYSCMIDMLGRAGILDKAEELLQQTP 581
+ CNH G+VK+G ++F SM ++ D QHYSC++DML RAG +D A EL++ P
Sbjct: 557 SACNHGGLVKKGLMIFKSM-----VEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLP 611
Query: 582 GG--GDCMMWSSLLRSCRVHGNE-IIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEV 638
W ++L CR + II V ++ELEP+ + Y S+ ++ +E
Sbjct: 612 EDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWED 671
Query: 639 SMQIRETALARKLTRDIGHSLI 660
+R RK+ G+S++
Sbjct: 672 VAMMRRLVKERKVRVVAGYSMV 693
Score = 176 bits (446), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 126/518 (24%), Positives = 249/518 (48%), Gaps = 17/518 (3%)
Query: 86 GKFRHPKQALYLYDEMVSHGIK-ESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLN 144
GK+R + + Y E+ G++ F V C+ + +G I +L GF
Sbjct: 25 GKWR---EVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGRCIQASLLKRGFESF 81
Query: 145 LYIGSPLVDLYMRMGPSVRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKA 204
+ +G+ + D YM+ G L FD + R+ +WN+++ + +E L ++K++
Sbjct: 82 VSVGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRV 141
Query: 205 EGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLI 264
G EPN + ++ C L +G+++H +VI+ G+ ++ V N+++ Y+ SL
Sbjct: 142 WGFEPNTSTLVLVIHACR--SLWFDGEKIHGYVIRSGFCGIS-SVQNSILCMYADSDSL- 197
Query: 265 EAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFFRM-QLCRKRPSIRSFVEFLNFA 323
A+K FD + DVISW+ ++ Y L+LF M + P + L
Sbjct: 198 SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKAC 257
Query: 324 SRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECC 383
+ ++ G+ +HG+ + GFD V V ++L DMY K ++S+ VF+ R++
Sbjct: 258 TVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSW 317
Query: 384 NSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCA 443
NS++ +H+ +A+EMF MV E + +DEVT+ + L+ C+ +H
Sbjct: 318 NSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPL--PCKSIHGVI 375
Query: 444 IKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREAL 503
I+ G+ESN SL+DAY+ C ++ + V + + +VV +++++G + G EA+
Sbjct: 376 IRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAI 435
Query: 504 DMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFN-SMKSVYGIDADRQHYSCMID 562
+ M P+ +T + +L C+ S ++ + +++ I+ D + ++D
Sbjct: 436 SIFCHMRD---TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAIN-DISVGTSIVD 491
Query: 563 MLGRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHG 600
+ G ++ A Q + + W+ ++ + ++G
Sbjct: 492 AYAKCGAIEMARRTFDQIT-EKNIISWTVIISAYAING 528
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 282 bits (721), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 161/606 (26%), Positives = 315/606 (51%), Gaps = 8/606 (1%)
Query: 58 GHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVL 117
G+ A+ +FD++P D + +++ + + + LYD ++ HG + FS L
Sbjct: 90 GYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKAL 149
Query: 118 SVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLA 177
C+ G +IHC+++ + N+ + + L+D+Y + G A +F+++ RN+
Sbjct: 150 KACTELQDLDNGKKIHCQLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDITLRNVV 208
Query: 178 TWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHV 237
W M+ + + +E L ++N+M+ V N ++ ++ C+ L +GK H +
Sbjct: 209 CWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCL 268
Query: 238 IKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDA 297
+K G ++++ + +L+D Y CG + A++ F+ D++ W +++ Y + +A
Sbjct: 269 VKSG-IELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEA 327
Query: 298 LELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTD 357
L LF +M+ +P+ + L+ N+ G+ +HG K+G +V +AL
Sbjct: 328 LSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI--WDTNVANALVH 385
Query: 358 MYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVT 417
MY KC + VFE + + NS+++ +G+I +A+ +F M E + + VT
Sbjct: 386 MYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVT 445
Query: 418 LSTTLKALSVSASANLGSCRLLHCCAIKSGF--ESNIAVSCSLMDAYSRCGHIELSHQVF 475
+++ A + S +GS LH ++K GF S++ V +L+D Y++CG + + +F
Sbjct: 446 VASLFSACASLGSLAVGSS--LHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIF 503
Query: 476 EKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVK 535
+ I N + +++++ GY + G +L++ E M+++ P++ TF +L+ C H+GMV
Sbjct: 504 DTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVN 563
Query: 536 EGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLLRS 595
EG+ F+SM Y +HY+CM+DML RAG L++A +++++ P D + + L
Sbjct: 564 EGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHG 623
Query: 596 CRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQIRETALARKLTRDI 655
C +H +G V +++L P D + Y VSN Y+ G + + ++R R L++
Sbjct: 624 CGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIA 683
Query: 656 GHSLIE 661
GHS +E
Sbjct: 684 GHSTME 689
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/500 (26%), Positives = 247/500 (49%), Gaps = 12/500 (2%)
Query: 51 IDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESA 110
+D + K G + SA K+F+++ R++V + +I+G K ++ L L++ M + + +
Sbjct: 183 LDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNE 242
Query: 111 STFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDE 170
T+ +++ C+ +G H ++ G L+ + + L+D+Y++ G A +F+E
Sbjct: 243 YTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNE 302
Query: 171 LPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEG 230
+L W M+ + +E L ++ KMK ++PN ++ ++ GC + L+ G
Sbjct: 303 HSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELG 362
Query: 231 KQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYAD 290
+ +H IK+G D N VANALV Y+ C +AK F+ D+++WNSI+S ++
Sbjct: 363 RSVHGLSIKVGIWDTN--VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQ 420
Query: 291 YDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGF-DHGSV 349
I +AL LF RM P+ + + + G++ G +H Y KLGF SV
Sbjct: 421 NGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSV 480
Query: 350 HVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDE 409
HV +AL D Y KC +S+ +F++ ++ ++++ G+ ++E+F M+ +
Sbjct: 481 HVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKK 540
Query: 410 GIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIE 469
+E T ++ L A + N G + F + ++D +R G +E
Sbjct: 541 QQKPNESTFTSILSACGHTGMVNEGK-KYFSSMYKDYNFTPSTKHYTCMVDMLARAGELE 599
Query: 470 LSHQVFEKIP-SPNVVCFTSIMNGYSRNGMGREALDMLEVMIQR--GLIPDKVTFLCVLA 526
+ + EK+P P+V CF + ++G GM D+ E++I++ L PD ++ +++
Sbjct: 600 QALDIIEKMPIQPDVRCFGAFLHGC---GM-HSRFDLGEIVIKKMLDLHPDDASYYVLVS 655
Query: 527 GCNHS-GMVKEGQLVFNSMK 545
S G + + V N MK
Sbjct: 656 NLYASDGRWNQAKEVRNLMK 675
Score = 162 bits (411), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 130/490 (26%), Positives = 236/490 (48%), Gaps = 13/490 (2%)
Query: 116 VLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERN 175
+LS C+N Q H + G ++ I + LV LY G + A +FD++PE +
Sbjct: 50 LLSKCTNIDSLR---QSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 176 LATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHS 235
W +MLR +C EV+++Y+ + G + + F ++ C+ LD GK++H
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 236 HVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIF 295
++K+ D N+ V L+D Y+ CG + A K F+ I + +V+ W S+++ Y DL
Sbjct: 167 QLVKVPSFD-NV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCE 224
Query: 296 DALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSAL 355
+ L LF RM+ + ++ + ++ ++ GK HG + K G + S V S L
Sbjct: 225 EGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTS-L 283
Query: 356 TDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDE 415
DMY KC I ++ VF L +++ H+G++ +A+ +F M I +
Sbjct: 284 LDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNC 343
Query: 416 VTLSTTLKALSVSASANLGSCRLLHCCAIKSG-FESNIAVSCSLMDAYSRCGHIELSHQV 474
VT+++ L + + LG R +H +IK G +++N+A +L+ Y++C + V
Sbjct: 344 VTIASVLSGCGLIENLELG--RSVHGLSIKVGIWDTNVA--NALVHMYAKCYQNRDAKYV 399
Query: 475 FEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMV 534
FE ++V + SI++G+S+NG EAL + M + P+ VT + + C G +
Sbjct: 400 FEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSL 459
Query: 535 KEG-QLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLL 593
G L S+K + + + ++D + G A L+ T + + WS+++
Sbjct: 460 AVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSA-RLIFDTIEEKNTITWSAMI 518
Query: 594 RSCRVHGNEI 603
G+ I
Sbjct: 519 GGYGKQGDTI 528
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 67/154 (43%), Gaps = 2/154 (1%)
Query: 425 LSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVV 484
L +S N+ S R H +G +I+++ L+ Y G+ + + VF++IP P+
Sbjct: 49 LLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFY 108
Query: 485 CFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSM 544
+ ++ Y N E + + +++++ G D + F L C + G+ + +
Sbjct: 109 LWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQL 168
Query: 545 KSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQ 578
V D + ++DM + G + A ++
Sbjct: 169 VKVPSF--DNVVLTGLLDMYAKCGEIKSAHKVFN 200
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 281 bits (719), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 180/620 (29%), Positives = 322/620 (51%), Gaps = 11/620 (1%)
Query: 48 NRTIDDFVKSGHLNSAKKLFDEMPAR-DMVTYNLLISGCGKFRHPKQALYLYDEMVSHGI 106
N + + K+ L++A++LFD + D V +N ++S + L L+ EM G
Sbjct: 221 NALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGP 280
Query: 107 KESASTFSSVLSVCSNAGFYTEGIQIHCRVL-SLGFGLNLYIGSPLVDLYMRMGPSVRAL 165
++ T S L+ C + G +IH VL S LY+ + L+ +Y R G +A
Sbjct: 281 APNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAE 340
Query: 166 DLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGM 225
+ ++ ++ TWN +++ + + E L ++ M A G + + +S ++
Sbjct: 341 RILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLS 400
Query: 226 LLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIV 285
L G +LH++VIK GW D N+ V N L+D YS C ++F + D+ISW +++
Sbjct: 401 NLLAGMELHAYVIKHGW-DSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVI 459
Query: 286 SIYADYDLIFDALELFFRMQLCRKRPSIRSFV--EFLNFASRTGNVYFGKQIHGYVTKLG 343
+ YA D +ALELF + +KR I + L +S ++ K+IH ++ + G
Sbjct: 460 AGYAQNDCHVEALELF--RDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKG 517
Query: 344 FDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMF 403
+Q+ L D+YGKC + + VFES G+ + S+++S +GN +AVE+F
Sbjct: 518 L--LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELF 575
Query: 404 GFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYS 463
MV+ G+ D V L L A + ++ N G R +HC ++ GF +++ +++D Y+
Sbjct: 576 RRMVETGLSADSVALLCILSAAASLSALNKG--REIHCYLLRKGFCLEGSIAVAVVDMYA 633
Query: 464 RCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLC 523
CG ++ + VF++I ++ +TS++N Y +G G+ A+++ + M + PD ++FL
Sbjct: 634 CCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLA 693
Query: 524 VLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGG 583
+L C+H+G++ EG+ M+ Y ++ +HY C++DMLGRA + +A E ++
Sbjct: 694 LLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTE 753
Query: 584 GDCMMWSSLLRSCRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQIR 643
+W +LL +CR H + IG A L+ELEP + VSN ++E G + ++R
Sbjct: 754 PTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVR 813
Query: 644 ETALARKLTRDIGHSLIEVN 663
A + + G S IE++
Sbjct: 814 AKMKASGMEKHPGCSWIEMD 833
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 144/541 (26%), Positives = 257/541 (47%), Gaps = 23/541 (4%)
Query: 54 FVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTF 113
+ K G L+ A+K+FDEMP R +N +I P AL LY M G+ S+F
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185
Query: 114 SSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPE 173
++L C+ G ++H ++ LG+ +I + LV +Y + A LFD E
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245
Query: 174 RNLAT-WNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQ 232
+ A WN +L ++ + E L ++ +M G PN + + C GK+
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE 305
Query: 233 LHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYD 292
+H+ V+K ++V NAL+ Y+ CG + +A++ + DV++WNS++ Y
Sbjct: 306 IHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNL 365
Query: 293 LIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQ 352
+ +ALE F M + S + + R N+ G ++H YV K G+D ++ V
Sbjct: 366 MYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD-SNLQVG 424
Query: 353 SALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIG 412
+ L DMY KCN+ F + L +++ + +A+E+F + + +
Sbjct: 425 NTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRME 484
Query: 413 LDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSH 472
+DE+ L + L+A SV S + + +HC ++ G + + L+D Y +C ++ +
Sbjct: 485 IDEMILGSILRASSVLKSMLI--VKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYAT 541
Query: 473 QVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCN--- 529
+VFE I +VV +TS+++ + NG EA+++ M++ GL D V LC+L+
Sbjct: 542 RVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLS 601
Query: 530 --------HSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEE--LLQQ 579
H ++++G + S+ +V +D Y+C D+ + D+ E LLQ
Sbjct: 602 ALNKGREIHCYLLRKGFCLEGSI-AVAVVDM----YACCGDLQSAKAVFDRIERKGLLQY 656
Query: 580 T 580
T
Sbjct: 657 T 657
Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 136/502 (27%), Positives = 236/502 (47%), Gaps = 26/502 (5%)
Query: 112 TFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNL-YIGSPLVDLYMRMGPSVRALDLFDE 170
F+ VL +C ++G Q+H R+ L ++ LV +Y + G A +FDE
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 171 LPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLS-FCYMVRGCSIGMLLDE 229
+P+R WN M+ A+ P L +Y M+ EGV P GLS F +++ C+ +
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGV-PLGLSSFPALLKACAKLRDIRS 200
Query: 230 GKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFD-FIPVDDVISWNSIVSIY 288
G +LHS ++KLG+ F+ NALV Y+ L A++ FD F D + WNSI+S Y
Sbjct: 201 GSELHSLLVKLGYHSTG-FIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSY 259
Query: 289 ADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGS 348
+ + LELF M + P+ + V L GK+IH V K
Sbjct: 260 STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 319
Query: 349 VHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVD 408
++V +AL MY +C + + + + NSL+ + + K+A+E F M+
Sbjct: 320 LYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIA 379
Query: 409 EGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHI 468
G DEV++++ + A +NL + LH IK G++SN+ V +L+D YS+C
Sbjct: 380 AGHKSDEVSMTSIIAA--SGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLT 437
Query: 469 ELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGC 528
+ F ++ +++ +T+++ GY++N EAL++ + ++ + D++
Sbjct: 438 CYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMIL------- 490
Query: 529 NHSGMVKEGQLVFNSMKSVYGIDA--------DRQHYSCMIDMLGRAGILDKAEELLQQT 580
G + V SM V I D + ++D+ G+ + A + +
Sbjct: 491 ---GSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESI 547
Query: 581 PGGGDCMMWSSLLRSCRVHGNE 602
G D + W+S++ S ++GNE
Sbjct: 548 K-GKDVVSWTSMISSSALNGNE 568
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 209/438 (47%), Gaps = 17/438 (3%)
Query: 2 LSTKLLPRVRTITTLAPTCTSIVPLSSSLLLDSYCQPNPQLN------------IYSSNR 49
L T L R +T AP +IV ++ SY + +++ +Y N
Sbjct: 266 LETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNA 325
Query: 50 TIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKES 109
I + + G + A+++ +M D+VT+N LI G + K+AL + +M++ G K
Sbjct: 326 LIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD 385
Query: 110 ASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFD 169
+ +S+++ G+++H V+ G+ NL +G+ L+D+Y + + F
Sbjct: 386 EVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFL 445
Query: 170 ELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDE 229
+ +++L +W ++ + + E L ++ + + +E + + ++R S+ +
Sbjct: 446 RMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLI 505
Query: 230 GKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYA 289
K++H H+++ G +D + N LVD Y C ++ A + F+ I DV+SW S++S A
Sbjct: 506 VKEIHCHILRKGLLDT--VIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSA 563
Query: 290 DYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGF-DHGS 348
+A+ELF RM + + L+ A+ + G++IH Y+ + GF GS
Sbjct: 564 LNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGS 623
Query: 349 VHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVD 408
+ V A+ DMY C ++S+ AVF+ + L S++ + G K AVE+F M
Sbjct: 624 IAV--AVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRH 681
Query: 409 EGIGLDEVTLSTTLKALS 426
E + D ++ L A S
Sbjct: 682 ENVSPDHISFLALLYACS 699
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 160/358 (44%), Gaps = 35/358 (9%)
Query: 43 NIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLY---- 98
N+ N ID + K + F M +D++++ +I+G + +AL L+
Sbjct: 420 NLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVA 479
Query: 99 ------DEMVSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLV 152
DEM+ I ++S S+L V +IHC +L G L+ I + LV
Sbjct: 480 KKRMEIDEMILGSILRASSVLKSMLIV----------KEIHCHILRKGL-LDTVIQNELV 528
Query: 153 DLYMRMGPSVRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGL 212
D+Y + A +F+ + +++ +W M+ + E + ++ +M G+ + +
Sbjct: 529 DVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSV 588
Query: 213 SFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDF 272
+ ++ + L++G+++H ++++ G+ + +A A+VD Y+ CG L AK FD
Sbjct: 589 ALLCILSAAASLSALNKGREIHCYLLRKGFC-LEGSIAVAVVDMYACCGDLQSAKAVFDR 647
Query: 273 IPVDDVISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFG 332
I ++ + S+++ Y + A+ELF +M+ P SF+ L S G + G
Sbjct: 648 IERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEG 707
Query: 333 KQI-----HGYVTKLGFDHGSVHVQSALTDMYGKCNVIESS---VAVFESAPGRSLEC 382
+ H Y + +H L DM G+ N + + V + ++ P + C
Sbjct: 708 RGFLKIMEHEYELEPWPEH-----YVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWC 760
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 114/238 (47%), Gaps = 11/238 (4%)
Query: 42 LNIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEM 101
L+ N +D + K ++ A ++F+ + +D+V++ +IS + +A+ L+ M
Sbjct: 519 LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRM 578
Query: 102 VSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPS 161
V G+ + +LS ++ +G +IHC +L GF L I +VD+Y G
Sbjct: 579 VETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDL 638
Query: 162 VRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGC 221
A +FD + + L + M+ A+ + +++KM+ E V P+ +SF ++ C
Sbjct: 639 QSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYAC 698
Query: 222 SIGMLLDEGK---QLHSHVIKL-GWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPV 275
S LLDEG+ ++ H +L W + + LVD ++EA F+F+ +
Sbjct: 699 SHAGLLDEGRGFLKIMEHEYELEPWPEHYV----CLVDMLGRANCVVEA---FEFVKM 749
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 281 bits (719), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 181/642 (28%), Positives = 324/642 (50%), Gaps = 26/642 (4%)
Query: 43 NIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMV 102
++ +++ +D + K + ++F +P ++ V+++ +I+GC + AL + EM
Sbjct: 214 DVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQ 273
Query: 103 SHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSV 162
S S ++SVL C+ G Q+H L F + + + +D+Y +
Sbjct: 274 KVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQ 333
Query: 163 RALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCS 222
A LFD N ++N M+ + + + L +++++ + G+ + +S + R C+
Sbjct: 334 DAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACA 393
Query: 223 IGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWN 282
+ L EG Q++ IK + +++ VANA +D Y C +L EA + FD + D +SWN
Sbjct: 394 LVKGLSEGLQIYGLAIKSS-LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWN 452
Query: 283 SIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKL 342
+I++ + ++ L LF M R P +F L A G++ +G +IH + K
Sbjct: 453 AIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILK-ACTGGSLGYGMEIHSSIVKS 511
Query: 343 GFDHGSVHVQSALTDMYGKCNVIESSVAV----FESAP-------------GRSLECC-- 383
G S V +L DMY KC +IE + + F+ A R E C
Sbjct: 512 GMASNS-SVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVS 570
Query: 384 -NSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCC 442
NS+++ + +DA +F M++ GI D+ T +T L + ASA LG + +H
Sbjct: 571 WNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLG--KQIHAQ 628
Query: 443 AIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREA 502
IK +S++ + +L+D YS+CG + S +FEK + V + +++ GY+ +G G EA
Sbjct: 629 VIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEA 688
Query: 503 LDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMID 562
+ + E MI + P+ VTF+ +L C H G++ +G F MK YG+D HYS M+D
Sbjct: 689 IQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVD 748
Query: 563 MLGRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHGNEI-IGRRVANILMELEPVDFA 621
+LG++G + +A EL+++ P D ++W +LL C +H N + + L+ L+P D +
Sbjct: 749 ILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSS 808
Query: 622 VYSQVSNFYSEIGEFEVSMQIRETALARKLTRDIGHSLIEVN 663
Y+ +SN Y++ G +E +R KL ++ G S +E+
Sbjct: 809 AYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELK 850
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 155/603 (25%), Positives = 287/603 (47%), Gaps = 45/603 (7%)
Query: 26 LSSSLLLDSYCQPNPQLNIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGC 85
+S+S++ D P ++ S N+ I+ + KS + A F+ MP RD+V++N ++SG
Sbjct: 100 VSASMVFDKM----PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGY 155
Query: 86 GKFRHPKQALYLYDEMVSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNL 145
+ +++ ++ +M GI+ TF+ +L VCS + G+QIH V+ +G ++
Sbjct: 156 LQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDV 215
Query: 146 YIGSPLVDLYMRMGPSVRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAE 205
S L+D+Y + V +L +F +PE+N +W+ ++ + + L+ + +M+
Sbjct: 216 VAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKV 275
Query: 206 GVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIE 265
+ + ++R C+ L G QLH+H +K + I V A +D Y+ C ++ +
Sbjct: 276 NAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGI-VRTATLDMYAKCDNMQD 334
Query: 266 AKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASR 325
A+ FD + S+N++++ Y+ + F AL LF R+ S +
Sbjct: 335 AQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACAL 394
Query: 326 TGNVYFGKQIHGYVTK--LGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECC 383
+ G QI+G K L D V V +A DMYGKC + + VF+ R
Sbjct: 395 VKGLSEGLQIYGLAIKSSLSLD---VCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSW 451
Query: 384 NSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCA 443
N+++ + +G + + +F M+ I DE T + LKA + +LG +H
Sbjct: 452 NAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT---GGSLGYGMEIHSSI 508
Query: 444 IKSGFESNIAVSCSLMDAYSRCGHIELSHQV----------------FEKIPSPNV---- 483
+KSG SN +V CSL+D YS+CG IE + ++ EK+ + +
Sbjct: 509 VKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMC 568
Query: 484 VCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNH---SGMVKE--GQ 538
V + SI++GY +A + M++ G+ PDK T+ VL C + +G+ K+ Q
Sbjct: 569 VSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQ 628
Query: 539 LVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRV 598
++ ++S D S ++DM + G L + + +++ D + W++++
Sbjct: 629 VIKKELQS------DVYICSTLVDMYSKCGDLHDSRLMFEKSL-RRDFVTWNAMICGYAH 681
Query: 599 HGN 601
HG
Sbjct: 682 HGK 684
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/536 (23%), Positives = 255/536 (47%), Gaps = 40/536 (7%)
Query: 73 RDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVLSVCSNAGFYTEGIQI 132
R +V++N ++ +R Y D ++ S + FS V C+ G G Q
Sbjct: 12 RSVVSFNRCLTEKISYRRVPSFSYFTD-FLNQVNSVSTTNFSFVFKECAKQGALELGKQA 70
Query: 133 HCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATWNLMLRAFC---EL 189
H ++ GF ++ + L+ +Y V A +FD++P R++ +WN M+ + ++
Sbjct: 71 HAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDM 130
Query: 190 SRPDEVLRM----------------------------YNKMKAEGVEPNGLSFCYMVRGC 221
+ + M + M EG+E +G +F +++ C
Sbjct: 131 FKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVC 190
Query: 222 SIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISW 281
S G Q+H V+++G D ++ A+AL+D Y+ +E+ + F IP + +SW
Sbjct: 191 SFLEDTSLGMQIHGIVVRVG-CDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSW 249
Query: 282 NSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTK 341
++I++ +L+ AL+ F MQ S + L + + G Q+H + K
Sbjct: 250 SAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALK 309
Query: 342 LGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVE 401
F + V++A DMY KC+ ++ + +F+++ + + N+++T + A+
Sbjct: 310 SDFAADGI-VRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALL 368
Query: 402 MFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDA 461
+F ++ G+G DE++LS +A ++ + G ++ AIKS ++ V+ + +D
Sbjct: 369 LFHRLMSSGLGFDEISLSGVFRACALVKGLSEG--LQIYGLAIKSSLSLDVCVANAAIDM 426
Query: 462 YSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTF 521
Y +C + + +VF+++ + V + +I+ + +NG G E L + M++ + PD+ TF
Sbjct: 427 YGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTF 486
Query: 522 LCVLAGCNHSGMVKEGQLVFNSM-KSVYGIDADRQHYSCMIDMLGRAGILDKAEEL 576
+L C G + G + +S+ KS G+ ++ +IDM + G++++AE++
Sbjct: 487 GSILKACT-GGSLGYGMEIHSSIVKS--GMASNSSVGCSLIDMYSKCGMIEEAEKI 539
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 100/199 (50%), Gaps = 10/199 (5%)
Query: 1 MLSTKLLPRVRTITTLAPTCTSIVPLSSSLLLDSYCQ---PNPQLNIYSSNRTIDDFVKS 57
M+ + P T T+ TC ++ S+ L + Q Q ++Y + +D + K
Sbjct: 594 MMEMGITPDKFTYATVLDTCANLA--SAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKC 651
Query: 58 GHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVL 117
G L+ ++ +F++ RD VT+N +I G ++A+ L++ M+ IK + TF S+L
Sbjct: 652 GDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISIL 711
Query: 118 SVCSNAGFYTEGIQIHCRVLSLGFGLNLYIG--SPLVDLYMRMGPSVRALDLFDELP-ER 174
C++ G +G++ + ++ +GL+ + S +VD+ + G RAL+L E+P E
Sbjct: 712 RACAHMGLIDKGLE-YFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEA 770
Query: 175 NLATWNLMLRAFCELSRPD 193
+ W +L C + R +
Sbjct: 771 DDVIWRTLL-GVCTIHRNN 788
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 280 bits (715), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 194/669 (28%), Positives = 322/669 (48%), Gaps = 52/669 (7%)
Query: 42 LNIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTY--NLLISGCGKFRHPKQALYLYD 99
L + ++ I ++ G L+ A L P D Y N LI G + LYL+
Sbjct: 57 LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFG 116
Query: 100 EMVSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMG 159
M S TF V C G H L GF N+++G+ LV +Y R
Sbjct: 117 LMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCR 176
Query: 160 PSVRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAE-GVEPNGLSFCYMV 218
A +FDE+ ++ +WN ++ ++ +L +P L M+++M E G P+ ++ ++
Sbjct: 177 SLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVL 236
Query: 219 RGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDV 278
C+ GKQLH + + N+FV N LVD Y+ CG + EA F + V DV
Sbjct: 237 PPCASLGTHSLGKQLHCFAVTSEMIQ-NMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDV 295
Query: 279 ISWNSIVSIYADYDLIFDALELFFRMQ-----------------------------LCRK 309
+SWN++V+ Y+ DA+ LF +MQ +CR+
Sbjct: 296 VSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQ 355
Query: 310 ------RPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFD-----HGSVH-VQSALTD 357
+P+ + + L+ + G + GK+IH Y K D HG + V + L D
Sbjct: 356 MLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLID 415
Query: 358 MYGKCNVIESSVAVFES-APG-RSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGL-- 413
MY KC ++++ A+F+S +P R + ++ G+ A+E+ M +E
Sbjct: 416 MYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRP 475
Query: 414 DEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFES-NIAVSCSLMDAYSRCGHIELSH 472
+ T+S L A + A+ +G + +H A+++ + + VS L+D Y++CG I +
Sbjct: 476 NAFTISCALVACASLAALRIG--KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDAR 533
Query: 473 QVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSG 532
VF+ + + N V +TS+M GY +G G EAL + + M + G D VT L VL C+HSG
Sbjct: 534 LVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSG 593
Query: 533 MVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSL 592
M+ +G FN MK+V+G+ +HY+C++D+LGRAG L+ A L+++ P ++W +
Sbjct: 594 MIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAF 653
Query: 593 LRSCRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQIRETALARKLT 652
L CR+HG +G A + EL Y+ +SN Y+ G ++ +IR + +
Sbjct: 654 LSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVK 713
Query: 653 RDIGHSLIE 661
+ G S +E
Sbjct: 714 KRPGCSWVE 722
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 142/546 (26%), Positives = 246/546 (45%), Gaps = 70/546 (12%)
Query: 132 IHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLAT--WNLMLRAFCEL 189
IH ++LS G L L + S L+ Y+ +G A+ L P + WN ++R++ +
Sbjct: 47 IHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDN 105
Query: 190 SRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFV 249
++ L ++ M + P+ +F ++ + C + G+ H+ + G++ N+FV
Sbjct: 106 GCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFIS-NVFV 164
Query: 250 ANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFFRMQL--- 306
NALV YS C SL +A+K FD + V DV+SWNSI+ YA ALE+F RM
Sbjct: 165 GNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFG 224
Query: 307 CRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIE 366
C RP + V L + G GKQ+H + ++ V + L DMY KC +++
Sbjct: 225 C--RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQ-NMFVGNCLVDMYAKCGMMD 281
Query: 367 SSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTL---- 422
+ VF + + + N+++ G +DAV +F M +E I +D VT S +
Sbjct: 282 EANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYA 341
Query: 423 ------KALSV--------------------SASANLGSC---RLLHCCAI-------KS 446
+AL V S A++G+ + +HC AI K+
Sbjct: 342 QRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKN 401
Query: 447 GFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSP---NVVCFTSIMNGYSRNGMGREAL 503
G V L+D Y++C ++ + +F+ + SP +VV +T ++ GYS++G +AL
Sbjct: 402 GHGDENMVINQLIDMYAKCKKVDTARAMFDSL-SPKERDVVTWTVMIGGYSQHGDANKAL 460
Query: 504 DMLEVMIQRG--LIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHY---- 557
++L M + P+ T C L C ++ G+ + Y + +
Sbjct: 461 ELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQI-----HAYALRNQQNAVPLFV 515
Query: 558 -SCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHGNEIIGRRVANILMELE 616
+C+IDM + G + A + + + W+SL+ +HG G I E+
Sbjct: 516 SNCLIDMYAKCGSISDARLVFDNMMAKNE-VTWTSLMTGYGMHG---YGEEALGIFDEMR 571
Query: 617 PVDFAV 622
+ F +
Sbjct: 572 RIGFKL 577
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 88/174 (50%), Gaps = 15/174 (8%)
Query: 8 PRVRTITTLAPTCTSIVPLSSSLLLDSYCQPNPQ--LNIYSSNRTIDDFVKSGHLNSAKK 65
P TI+ C S+ L + +Y N Q + ++ SN ID + K G ++ A+
Sbjct: 475 PNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARL 534
Query: 66 LFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVLSVCSNAGF 125
+FD M A++ VT+ L++G G + ++AL ++DEM G K T VL CS++G
Sbjct: 535 VFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGM 594
Query: 126 YTEGIQIHCRVLSLGFGLNLYIGSP-------LVDLYMRMGPSVRALDLFDELP 172
+G++ R+ ++ FG+ SP LVDL R G AL L +E+P
Sbjct: 595 IDQGMEYFNRMKTV-FGV-----SPGPEHYACLVDLLGRAGRLNAALRLIEEMP 642
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 279 bits (714), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 193/669 (28%), Positives = 332/669 (49%), Gaps = 12/669 (1%)
Query: 3 STKLLPRVRTITTLAPTCTSIVPLSSSLLLDSYCQPNPQL-NIYSSNRTIDDFVKSGHLN 61
+T LLP T + C + + L + + +++ N + + G +
Sbjct: 180 TTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVT 239
Query: 62 SAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSH----GIKESASTFSSVL 117
A +LFD MP R++V++N +I +++ L EM+ +T +VL
Sbjct: 240 DALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVL 299
Query: 118 SVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLA 177
VC+ G +H + L L + + L+D+Y + G A +F +N+
Sbjct: 300 PVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVV 359
Query: 178 TWNLMLRAFCELSRPDEVLRMYNKMKA--EGVEPNGLSFCYMVRGCSIGMLLDEGKQLHS 235
+WN M+ F + +M A E V+ + ++ V C L K+LH
Sbjct: 360 SWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHC 419
Query: 236 HVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIF 295
+ +K +V N VANA V Y+ CGSL A++ F I V SWN+++ +A +
Sbjct: 420 YSLKQEFV-YNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPR 478
Query: 296 DALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSAL 355
+L+ +M++ P + L+ S+ ++ GK++HG++ + + + V ++
Sbjct: 479 LSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER-DLFVYLSV 537
Query: 356 TDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDE 415
+Y C + + A+F++ +SL N+++T L +G A+ +F MV GI L
Sbjct: 538 LSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCG 597
Query: 416 VTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVF 475
+++ A S+ S LG R H A+K E + ++CSL+D Y++ G I S +VF
Sbjct: 598 ISMMPVFGACSLLPSLRLG--REAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVF 655
Query: 476 EKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVK 535
+ + + +++ GY +G+ +EA+ + E M + G PD +TFL VL CNHSG++
Sbjct: 656 NGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIH 715
Query: 536 EGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELL-QQTPGGGDCMMWSSLLR 594
EG + MKS +G+ + +HY+C+IDMLGRAG LDKA ++ ++ D +W SLL
Sbjct: 716 EGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLS 775
Query: 595 SCRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQIRETALARKLTRD 654
SCR+H N +G +VA L ELEP Y +SN Y+ +G++E ++R+ L +D
Sbjct: 776 SCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKD 835
Query: 655 IGHSLIEVN 663
G S IE+N
Sbjct: 836 AGCSWIELN 844
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 200/400 (50%), Gaps = 13/400 (3%)
Query: 149 SPLVDLYMRMGPSVRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKM-KAEGV 207
+ ++ +Y G + +FD L +NL WN ++ ++ DEVL + +M +
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 183
Query: 208 EPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAK 267
P+ ++ +++ C+ + G +H V+K G V+ ++FV NALV FY G + +A
Sbjct: 184 LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVE-DVFVGNALVSFYGTHGFVTDAL 242
Query: 268 KSFDFIPVDDVISWNSIVSIYADYDLIFDALELFFRMQLCRKR----PSIRSFVEFLNFA 323
+ FD +P +++SWNS++ +++D ++ L M P + + V L
Sbjct: 243 QLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 302
Query: 324 SRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECC 383
+R + GK +HG+ KL D V + +AL DMY KC I ++ +F+ +++
Sbjct: 303 AREREIGLGKGVHGWAVKLRLDKELV-LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 361
Query: 384 NSLMTSLLHSGNIKDAVEMFGFMV--DEGIGLDEVTLSTTLKALSVSASAN-LGSCRLLH 440
N+++ G+ ++ M+ E + DEVT+ L A+ V + L S + LH
Sbjct: 362 NTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTI---LNAVPVCFHESFLPSLKELH 418
Query: 441 CCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGR 500
C ++K F N V+ + + +Y++CG + + +VF I S V + +++ G++++ R
Sbjct: 419 CYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPR 478
Query: 501 EALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLV 540
+LD M GL+PD T +L+ C+ ++ G+ V
Sbjct: 479 LSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEV 518
Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 133/566 (23%), Positives = 253/566 (44%), Gaps = 25/566 (4%)
Query: 48 NRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVS-HGI 106
R I + G + ++ +FD + ++++ +N +IS + + L + EM+S +
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 183
Query: 107 KESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALD 166
T+ V+ C+ G+ +H V+ G ++++G+ LV Y G AL
Sbjct: 184 LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ 243
Query: 167 LFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVE----PNGLSFCYMVRGCS 222
LFD +PERNL +WN M+R F + +E + +M E + P+ + ++ C+
Sbjct: 244 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 303
Query: 223 IGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWN 282
+ GK +H +KL +D + + NAL+D YS CG + A+ F +V+SWN
Sbjct: 304 REREIGLGKGVHGWAVKLR-LDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWN 362
Query: 283 SIV---SIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYF---GKQIH 336
++V S D FD L R L V LN + F K++H
Sbjct: 363 TMVGGFSAEGDTHGTFDVL----RQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELH 418
Query: 337 GYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNI 396
Y K F + + V +A Y KC + + VF +++ N+L+ S +
Sbjct: 419 CYSLKQEFVYNEL-VANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDP 477
Query: 397 KDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSC 456
+ +++ M G+ D T+ + L A S S LG + +H I++ E ++ V
Sbjct: 478 RLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLG--KEVHGFIIRNWLERDLFVYL 535
Query: 457 SLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIP 516
S++ Y CG + +F+ + ++V + +++ GY +NG AL + M+ G+
Sbjct: 536 SVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQL 595
Query: 517 DKVTFLCVLAGCNHSGMVKEGQLVFN-SMKSVYGIDADRQHYSC-MIDMLGRAGILDKAE 574
++ + V C+ ++ G+ ++K + DA +C +IDM + G + ++
Sbjct: 596 CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDA---FIACSLIDMYAKNGSITQSS 652
Query: 575 ELLQQTPGGGDCMMWSSLLRSCRVHG 600
++ W++++ +HG
Sbjct: 653 KVFNGLKEKSTA-SWNAMIMGYGIHG 677
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 170/363 (46%), Gaps = 18/363 (4%)
Query: 186 FCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLL---------DEGKQLHSH 236
FCE D+ R + + E + +F +VR ++G+LL + G+++H
Sbjct: 53 FCETGDLDKSFRTVQEFVGDD-ESSSDAFL-LVRE-ALGLLLQASGKRKDIEMGRKIHQL 109
Query: 237 VIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFD 296
V + + + ++ Y+ CGS +++ FD + ++ WN+++S Y+ +L +
Sbjct: 110 VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDE 169
Query: 297 ALELFFRM-QLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSAL 355
LE F M P ++ + + +V G +HG V K G V V +AL
Sbjct: 170 VLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVE-DVFVGNAL 228
Query: 356 TDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDE-GIGLD 414
YG + ++ +F+ P R+L NS++ +G +++ + G M++E G G
Sbjct: 229 VSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAF 288
Query: 415 EVTLSTTLKALSVSA-SANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQ 473
++T + L V A +G + +H A+K + + ++ +LMD YS+CG I +
Sbjct: 289 MPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQM 348
Query: 474 VFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRG--LIPDKVTFLCVLAGCNHS 531
+F+ + NVV + +++ G+S G D+L M+ G + D+VT L + C H
Sbjct: 349 IFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHE 408
Query: 532 GMV 534
+
Sbjct: 409 SFL 411
>sp|Q9SUF9|PP305_ARATH Pentatricopeptide repeat-containing protein At4g08210
OS=Arabidopsis thaliana GN=PCMP-E100 PE=3 SV=1
Length = 686
Score = 279 bits (713), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 195/659 (29%), Positives = 340/659 (51%), Gaps = 53/659 (8%)
Query: 43 NIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMV 102
N++ +N I +V L+ A K+FDEM R++VT+ ++SG P +A+ LY M+
Sbjct: 39 NVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRML 98
Query: 103 SHGIKESASTF--SSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMG- 159
+E+A+ F S+VL C G GI ++ R+ ++ + + +VD+Y++ G
Sbjct: 99 DSE-EEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGR 157
Query: 160 -------------PSV-----------------RALDLFDELPERNLATWNLMLRAFCEL 189
PS A+ LF +P+ N+ +WN ++ F +
Sbjct: 158 LIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDK 217
Query: 190 SRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFV 249
P L +M+ EG+ +G + ++ CS G LL GKQLH V+K G ++ + F
Sbjct: 218 GSP-RALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSG-LESSPFA 275
Query: 250 ANALVDFYSACGSLIEAKKSF--DFIPVDDVIS-WNSIVS---IYADYDLIFDALELFFR 303
+AL+D YS CGSLI A F + + V+ ++ WNS++S I + + L ++
Sbjct: 276 ISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQ 335
Query: 304 MQLCRKRPSIRSFVEF-LNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKC 362
LC ++ ++ +N+ N+ G Q+H V G++ + V S L D++
Sbjct: 336 SDLCFDSYTLSGALKICINYV----NLRLGLQVHSLVVVSGYELDYI-VGSILVDLHANV 390
Query: 363 NVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTL 422
I+ + +F P + + + L+ + SG A +F ++ G+ D+ +S L
Sbjct: 391 GNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNIL 450
Query: 423 KALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPN 482
K S+ A+LG + +H IK G+ES + +L+D Y +CG I+ +F+ + +
Sbjct: 451 KV--CSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERD 508
Query: 483 VVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFN 542
VV +T I+ G+ +NG EA MI G+ P+KVTFL +L+ C HSG+++E +
Sbjct: 509 VVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLE 568
Query: 543 SMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHGNE 602
+MKS YG++ +HY C++D+LG+AG+ +A EL+ + P D +W+SLL +C H N
Sbjct: 569 TMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNA 628
Query: 603 IIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQIRETALARKL-TRDIGHSLI 660
+ +A L++ P D +VY+ +SN Y+ +G ++ ++RE A+KL ++ G S I
Sbjct: 629 GLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREA--AKKLGAKESGMSWI 685
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/492 (23%), Positives = 220/492 (44%), Gaps = 47/492 (9%)
Query: 120 CSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATW 179
C + G I V+ G N++I + ++ +Y+ A +FDE+ ERN+ TW
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 180 NLMLRAFCELSRPDEVLRMYNKM-KAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVI 238
M+ + +P++ + +Y +M +E N + +++ C + + G ++ +
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIG 134
Query: 239 KLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDAL 298
K + ++ + N++VD Y G LIEA SF I SWN+++S Y L+ +A+
Sbjct: 135 KEN-LRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAV 193
Query: 299 ELFFRMQLCRKRPSIRSF---------------VEFLNFASRTGNVY------------- 330
LF RM +P++ S+ +EFL R G V
Sbjct: 194 TLFHRM----PQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACS 249
Query: 331 ------FGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFES---APGRSLE 381
GKQ+H V K G + + SAL DMY C + + VF A S+
Sbjct: 250 FGGLLTMGKQLHCCVVKSGLESSPFAI-SALIDMYSNCGSLIYAADVFHQEKLAVNSSVA 308
Query: 382 CCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHC 441
NS+++ L + + A+ + + + D TLS LK + LG +H
Sbjct: 309 VWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLG--LQVHS 366
Query: 442 CAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGRE 501
+ SG+E + V L+D ++ G+I+ +H++F ++P+ +++ F+ ++ G ++G
Sbjct: 367 LVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSL 426
Query: 502 ALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMI 561
A + +I+ GL D+ +L C+ + G+ + + + G +++ + ++
Sbjct: 427 AFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQI-HGLCIKKGYESEPVTATALV 485
Query: 562 DMLGRAGILDKA 573
DM + G +D
Sbjct: 486 DMYVKCGEIDNG 497
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 118/501 (23%), Positives = 216/501 (43%), Gaps = 45/501 (8%)
Query: 30 LLLDSYCQPNPQLNIYSSNRTIDDFVKSGHL----------------------------- 60
L+ + + N + ++ N +D +VK+G L
Sbjct: 128 LVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAG 187
Query: 61 --NSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVLS 118
+ A LF MP ++V++N LISG P+ AL M G+ L
Sbjct: 188 LMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCGLK 246
Query: 119 VCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELP---ERN 175
CS G T G Q+HC V+ G + + S L+D+Y G + A D+F + +
Sbjct: 247 ACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSS 306
Query: 176 LATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHS 235
+A WN ML F + L + ++ + + + ++ C + L G Q+HS
Sbjct: 307 VAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHS 366
Query: 236 HVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIF 295
V+ G+ +++ V + LVD ++ G++ +A K F +P D+I+++ ++ F
Sbjct: 367 LVVVSGY-ELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSG--F 423
Query: 296 DALELFFRMQLCRKRPSIRSFV--EFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQS 353
++L + +L + F+ L S ++ +GKQIHG K G++ V +
Sbjct: 424 NSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPV-TAT 482
Query: 354 ALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGL 413
AL DMY KC I++ V +F+ R + ++ +G +++A F M++ GI
Sbjct: 483 ALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEP 542
Query: 414 DEVTLSTTLKALSVSASANLGSCR-LLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSH 472
++VT L A S L R L + G E + ++D + G + ++
Sbjct: 543 NKVTFLGLLSA--CRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEAN 600
Query: 473 QVFEKIP-SPNVVCFTSIMNG 492
++ K+P P+ +TS++
Sbjct: 601 ELINKMPLEPDKTIWTSLLTA 621
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 278 bits (712), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 178/661 (26%), Positives = 339/661 (51%), Gaps = 15/661 (2%)
Query: 9 RVRTITTLAPTCTSIVPLSSSL-----LLDSYCQPNPQLNIYSSNRTIDDFVKSGHLNSA 63
R+RT +L C+S L+ +L+S C+ + LN N + + K G L A
Sbjct: 66 RLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILN----NHILSMYGKCGSLRDA 121
Query: 64 KKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVLSVCSNA 123
+++FD MP R++V+Y +I+G + +A+ LY +M+ + F S++ C+++
Sbjct: 122 REVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASS 181
Query: 124 GFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATWNLML 183
G Q+H +V+ L +L + L+ +Y+R A +F +P ++L +W+ ++
Sbjct: 182 SDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSII 241
Query: 184 RAFCELSRPDEVLRMYNKMKAEGV-EPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGW 242
F +L E L +M + GV PN F ++ CS + D G Q+H IK
Sbjct: 242 AGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIK-SE 300
Query: 243 VDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFF 302
+ N +L D Y+ CG L A++ FD I D SWN I++ A+ +A+ +F
Sbjct: 301 LAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFS 360
Query: 303 RMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKC 362
+M+ P S L ++ + G QIH Y+ K GF + V ++L MY C
Sbjct: 361 QMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGF-LADLTVCNSLLTMYTFC 419
Query: 363 NVIESSVAVFESAPGRSLECC-NSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTT 421
+ + +FE + N+++T+ L + + +F M+ D +T+
Sbjct: 420 SDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNL 479
Query: 422 LKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSP 481
L+ +S LGS +HC ++K+G + L+D Y++CG + + ++F+ + +
Sbjct: 480 LRGCVEISSLKLGS--QVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNR 537
Query: 482 NVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVF 541
+VV +++++ GY+++G G EAL + + M G+ P+ VTF+ VL C+H G+V+EG ++
Sbjct: 538 DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLY 597
Query: 542 NSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHGN 601
+M++ +GI ++H SC++D+L RAG L++AE + + D ++W +LL +C+ GN
Sbjct: 598 ATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGN 657
Query: 602 EIIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQIRETALARKLTRDIGHSLIE 661
+ ++ A +++++P + + + + ++ G +E + +R + + + G S IE
Sbjct: 658 VHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIE 717
Query: 662 V 662
+
Sbjct: 718 I 718
>sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protein At4g20770
OS=Arabidopsis thaliana GN=PCMP-E35 PE=3 SV=2
Length = 774
Score = 277 bits (709), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 180/628 (28%), Positives = 312/628 (49%), Gaps = 51/628 (8%)
Query: 43 NIYSSNRTIDDFVKSGHL-NSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEM 101
NI+ N + + K G + + ++F+ + + V+Y +I G + +A+ ++ M
Sbjct: 172 NIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLM 231
Query: 102 VSHGIKESASTFSSVLSVC-------SNAGFYTE--GIQIHCRVLSLGFGLNLYIGSPLV 152
G++ + S++LS+ S + Y G QIHC L LGFG +L++ + L+
Sbjct: 232 CEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLL 291
Query: 153 DLYMRMGPSVRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGL 212
++Y + A +F E+PE N+ +WN+M+ F + R D+ + +M+ G +PN +
Sbjct: 292 EIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEV 351
Query: 213 SFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDF 272
+ ++ C F S G + ++ F
Sbjct: 352 TCISVLGAC----------------------------------FRS--GDVETGRRIFSS 375
Query: 273 IPVDDVISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFG 332
IP V +WN+++S Y++Y+ +A+ F +MQ +P + L+ +R + G
Sbjct: 376 IPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGG 435
Query: 333 KQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGR-SLECCNSLMTSLL 391
KQIHG V + S H+ S L +Y +C +E S +F+ + C NS+++
Sbjct: 436 KQIHGVVIRTEISKNS-HIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFR 494
Query: 392 HSGNIKDAVEMFGFMVDEGIGL-DEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFES 450
H+ A+ +F M + +E + +T L + S S G R H +KSG+ S
Sbjct: 495 HNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHG--RQFHGLVVKSGYVS 552
Query: 451 NIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMI 510
+ V +L D Y +CG I+ + Q F+ + N V + +++GY NG G EA+ + MI
Sbjct: 553 DSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMI 612
Query: 511 QRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGIL 570
G PD +TF+ VL C+HSG+V+ G + +SM+ ++GI+ + HY C++D LGRAG L
Sbjct: 613 SSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRL 672
Query: 571 DKAEELLQQTPGGGDCMMWSSLLRSCRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFY 630
+ AE+L + TP ++W LL SCRVHG+ + RRVA LM L+P A Y +SN Y
Sbjct: 673 EDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTY 732
Query: 631 SEIGEFEVSMQIRETALARKLTRDIGHS 658
S + +++ S ++ ++ + G S
Sbjct: 733 SSLRQWDDSAALQGLMNKNRVHKTPGQS 760
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 129/547 (23%), Positives = 249/547 (45%), Gaps = 52/547 (9%)
Query: 43 NIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMV 102
++YS N + K G L A ++FD MP RD+V++N +IS + ++AL +Y MV
Sbjct: 71 DVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV 130
Query: 103 SHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSV 162
G S T +SVLS CS G++ H + G N+++G+ L+ +Y + G V
Sbjct: 131 CDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIV 190
Query: 163 R-ALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVE------PNGLSFC 215
+ +F+ L + N ++ ++ ++ E ++M+ M +GV+ N LS
Sbjct: 191 DYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSIS 250
Query: 216 YMVRGC-SIGMLLDE--GKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDF 272
GC S+ + GKQ+H ++LG+ ++ + N+L++ Y+ + A+ F
Sbjct: 251 APREGCDSLSEIYGNELGKQIHCLALRLGF-GGDLHLNNSLLEIYAKNKDMNGAELIFAE 309
Query: 273 IPVDDVISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFG 332
+P +V+SWN ++ + ++E RM+ +P+ + + L R+G+V G
Sbjct: 310 MPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETG 369
Query: 333 KQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLH 392
++I F S P S+ N++++ +
Sbjct: 370 RRI------------------------------------FSSIPQPSVSAWNAMLSGYSN 393
Query: 393 SGNIKDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNI 452
+ ++A+ F M + + D+ TLS L S + L + +H I++ N
Sbjct: 394 YEHYEEAISNFRQMQFQNLKPDKTTLSVILS--SCARLRFLEGGKQIHGVVIRTEISKNS 451
Query: 453 AVSCSLMDAYSRCGHIELSHQVFEK-IPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQ 511
+ L+ YS C +E+S +F+ I ++ C+ S+++G+ N + +AL + M Q
Sbjct: 452 HIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQ 511
Query: 512 RG-LIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGIL 570
L P++ +F VL+ C+ + G+ F+ + G +D + + DM + G +
Sbjct: 512 TAVLCPNETSFATVLSSCSRLCSLLHGRQ-FHGLVVKSGYVSDSFVETALTDMYCKCGEI 570
Query: 571 DKAEELL 577
D A +
Sbjct: 571 DSARQFF 577
Score = 129 bits (324), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 174/371 (46%), Gaps = 50/371 (13%)
Query: 215 CYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSAC-------------- 260
CY C + GK +H ++++G + + ++ N L+D Y C
Sbjct: 15 CYRDERCKL-----SGKVIHGFIVRMG-MKSDTYLCNRLLDLYIECGDGDYARKVFDEMS 68
Query: 261 -----------------GSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFFR 303
G L EA + FD +P DV+SWN+++S+ AL ++ R
Sbjct: 69 VRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKR 128
Query: 304 MQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCN 363
M PS + L+ S+ + FG + HG K G D ++ V +AL MY KC
Sbjct: 129 MVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDK-NIFVGNALLSMYAKCG 187
Query: 364 -VIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTL 422
+++ V VFES + +++ L + +AV+MF M ++G+ +D V LS L
Sbjct: 188 FIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNIL 247
Query: 423 K---------ALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQ 473
+LS LG + +HC A++ GF ++ ++ SL++ Y++ + +
Sbjct: 248 SISAPREGCDSLSEIYGNELG--KQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAEL 305
Query: 474 VFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGM 533
+F ++P NVV + ++ G+ + ++++ L M G P++VT + VL C SG
Sbjct: 306 IFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGD 365
Query: 534 VKEGQLVFNSM 544
V+ G+ +F+S+
Sbjct: 366 VETGRRIFSSI 376
Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 195/455 (42%), Gaps = 84/455 (18%)
Query: 129 GIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGP-----------SVR-------------- 163
G IH ++ +G + Y+ + L+DLY+ G SVR
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 164 ------ALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYM 217
A ++FD +PER++ +WN M+ ++ L +Y +M +G P+ + +
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 218 VRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIE-AKKSFDFIPVD 276
+ CS + G + H +K G +D NIFV NAL+ Y+ CG +++ + F+ +
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTG-LDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 277 DVISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRS--FVEFLNF-ASRTG-----N 328
+ +S+ +++ A + + +A+++F M C K + S L+ A R G
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLM--CEKGVQVDSVCLSNILSISAPREGCDSLSE 261
Query: 329 VY---FGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNS 385
+Y GKQIH +LGF G +H+ ++L ++Y K + + +F P ++ N
Sbjct: 262 IYGNELGKQIHCLALRLGFG-GDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNI 320
Query: 386 LMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIK 445
++ +VE M D G +EVT +SV LG+C
Sbjct: 321 MIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVT------CISV-----LGAC--------- 360
Query: 446 SGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDM 505
R G +E ++F IP P+V + ++++GYS EA+
Sbjct: 361 -----------------FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISN 403
Query: 506 LEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLV 540
M + L PDK T +L+ C ++ G+ +
Sbjct: 404 FRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQI 438
>sp|Q9M2Y4|PP276_ARATH Pentatricopeptide repeat-containing protein At3g49740
OS=Arabidopsis thaliana GN=PCMP-E84 PE=2 SV=1
Length = 737
Score = 276 bits (705), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 179/609 (29%), Positives = 325/609 (53%), Gaps = 20/609 (3%)
Query: 43 NIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVT-YNLLISGCGKFRHPKQALYLYDEM 101
++YS + K G + A ++FD+MP RD V +N +I+GC + + + ++ L+ EM
Sbjct: 122 DVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREM 181
Query: 102 VSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPS 161
G++ F+++LS+C + G G Q+H V+ GF + + + L+ +Y
Sbjct: 182 HKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVV 240
Query: 162 VRALDLFDE--LPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVR 219
V A +F+E + R+ T+N+++ R DE L ++ KM + P L+F ++
Sbjct: 241 VDACLVFEETDVAVRDQVTFNVVIDGLAGFKR-DESLLVFRKMLEASLRPTDLTFVSVMG 299
Query: 220 GCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVI 279
CS + G Q+H IK G+ + V+NA + YS+ A K F+ + D++
Sbjct: 300 SCSCAAM---GHQVHGLAIKTGYEKYTL-VSNATMTMYSSFEDFGAAHKVFESLEEKDLV 355
Query: 280 SWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYV 339
+WN+++S Y L A+ ++ RM + +P +F L + + ++ + + +
Sbjct: 356 TWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL---ATSLDLDVLEMVQACI 412
Query: 340 TKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDA 399
K G + + +AL Y K IE + +FE + ++L N++++ H+G +
Sbjct: 413 IKFGLS-SKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEG 471
Query: 400 VEMFGFMVDEGIGL--DEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCS 457
+E F +++ + + D TLST L ++S LGS H ++ G + +
Sbjct: 472 LERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGS--QTHAYVLRHGQFKETLIGNA 529
Query: 458 LMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRG-LIP 516
L++ YS+CG I+ S +VF ++ +VV + S+++ YSR+G G A++ + M G +IP
Sbjct: 530 LINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIP 589
Query: 517 DKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEEL 576
D TF VL+ C+H+G+V+EG +FNSM +G+ + H+SC++D+LGRAG LD+AE L
Sbjct: 590 DAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESL 649
Query: 577 LQ--QTPGGGDCMMWSSLLRSCRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIG 634
++ + G +W +L +C HG+ +G+ VA +LME E D +VY Q+SN Y+ G
Sbjct: 650 VKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAG 709
Query: 635 EFEVSMQIR 643
++ + + R
Sbjct: 710 MWKEAEETR 718
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 141/559 (25%), Positives = 250/559 (44%), Gaps = 66/559 (11%)
Query: 129 GIQIHCRVLSLGFGLNLYIGSPLVDLYMRMG--------------PSV------------ 162
G Q+HC + G + ++ + L+ LY R+G P V
Sbjct: 76 GGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFK 135
Query: 163 -----RALDLFDELPER-NLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCY 216
A ++FD++PER ++A WN M+ E + + ++ +M GV + F
Sbjct: 136 LGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFAT 195
Query: 217 MVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDF--IP 274
++ C G LD GKQ+HS VIK G+ + V NAL+ Y C +++A F+ +
Sbjct: 196 ILSMCDYGS-LDFGKQVHSLVIKAGFF-IASSVVNALITMYFNCQVVVDACLVFEETDVA 253
Query: 275 VDDVISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQ 334
V D +++N ++ A + ++L +F +M RP+ +FV + S G Q
Sbjct: 254 VRDQVTFNVVIDGLAGFKRD-ESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQ 309
Query: 335 IHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSG 394
+HG K G++ ++ V +A MY ++ VFES + L N++++S +
Sbjct: 310 VHGLAIKTGYEKYTL-VSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAK 368
Query: 395 NIKDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAV 454
K A+ ++ M G+ DE T + L + S +L ++ C IK G S I +
Sbjct: 369 LGKSAMSVYKRMHIIGVKPDEFTFGSLL-----ATSLDLDVLEMVQACIIKFGLSSKIEI 423
Query: 455 SCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRG- 513
S +L+ AYS+ G IE + +FE+ N++ + +I++G+ NG E L+ +++
Sbjct: 424 SNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEV 483
Query: 514 -LIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVY----GIDADRQHYSCMIDMLGRAG 568
++PD T +L+ C V L+ S Y G + + +I+M + G
Sbjct: 484 RILPDAYTLSTLLSIC-----VSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCG 538
Query: 569 ILDKAEELLQQTPGGGDCMMWSSLLRSCRVHGNEIIGRRVANILMELEPV-----DFAVY 623
+ + E+ Q D + W+SL+ + HG G N ++ D A +
Sbjct: 539 TIQNSLEVFNQMS-EKDVVSWNSLISAYSRHGE---GENAVNTYKTMQDEGKVIPDAATF 594
Query: 624 SQVSNFYSEIGEFEVSMQI 642
S V + S G E ++I
Sbjct: 595 SAVLSACSHAGLVEEGLEI 613
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 275 bits (704), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 169/570 (29%), Positives = 301/570 (52%), Gaps = 42/570 (7%)
Query: 132 IHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVR----ALDLFDELPERNLATWNLMLRAFC 187
IH +++ +G Y S L++ + + P A+ +F + E NL WN M R
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCI-LSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHA 110
Query: 188 ELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNI 247
S P L++Y M + G+ PN +F ++++ C+ EG+Q+H HV+KLG D+++
Sbjct: 111 LSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLG-CDLDL 169
Query: 248 FVANALVDFYSACGSL------------------------------IE-AKKSFDFIPVD 276
+V +L+ Y G L IE A+K FD IPV
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK 229
Query: 277 DVISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIH 336
DV+SWN+++S YA+ +ALELF M RP + V ++ +++G++ G+Q+H
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289
Query: 337 GYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNI 396
++ GF ++ + +AL D+Y KC +E++ +FE P + + N+L+ H
Sbjct: 290 LWIDDHGFG-SNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLY 348
Query: 397 KDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIK--SGFESNIAV 454
K+A+ +F M+ G ++VT+ + L A + + ++G R +H K G + ++
Sbjct: 349 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG--RWIHVYIDKRLKGVTNASSL 406
Query: 455 SCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGL 514
SL+D Y++CG IE +HQVF I ++ + +++ G++ +G + D+ M + G+
Sbjct: 407 RTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGI 466
Query: 515 IPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAE 574
PD +TF+ +L+ C+HSGM+ G+ +F +M Y + +HY CMID+LG +G+ +AE
Sbjct: 467 QPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAE 526
Query: 575 ELLQQTPGGGDCMMWSSLLRSCRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIG 634
E++ D ++W SLL++C++HGN +G A L+++EP + Y +SN Y+ G
Sbjct: 527 EMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAG 586
Query: 635 EFEVSMQIRETALARKLTRDIGHSLIEVNS 664
+ + R + + + G S IE++S
Sbjct: 587 RWNEVAKTRALLNDKGMKKVPGCSSIEIDS 616
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 165/616 (26%), Positives = 268/616 (43%), Gaps = 102/616 (16%)
Query: 45 YSSNRTIDDFVKSGH---LNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEM 101
Y+ ++ I+ + S H L A +F + +++ +N + G P AL LY M
Sbjct: 66 YALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCM 125
Query: 102 VSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGP- 160
+S G+ ++ TF VL C+ + + EG QIH VL LG L+LY+ + L+ +Y++ G
Sbjct: 126 ISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRL 185
Query: 161 ----------------SVRAL--------------DLFDELPERNLATWNLMLRAFCELS 190
S AL LFDE+P +++ +WN M+ + E
Sbjct: 186 EDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETG 245
Query: 191 RPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVD-----V 245
E L ++ M V P+ + +V C+ ++ G+Q+H W+D
Sbjct: 246 NYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHL------WIDDHGFGS 299
Query: 246 NIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFFRMQ 305
N+ + NAL+D YS CG L A F+ +P DVISWN+++ Y +L +AL LF M
Sbjct: 300 NLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEML 359
Query: 306 LCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKL--GFDHGSVHVQSALTDMYGKCN 363
+ P+ + + L + G + G+ IH Y+ K G + S ++++L DMY KC
Sbjct: 360 RSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS-LRTSLIDMYAKCG 418
Query: 364 VIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLK 423
IE++ VF S +SL N+++ G + ++F M GI D++T L
Sbjct: 419 DIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLS 478
Query: 424 ALSVSASANLG-------------SCRLLHC-CAI----KSGF-------------ESNI 452
A S S +LG + +L H C I SG E +
Sbjct: 479 ACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDG 538
Query: 453 AVSCSLMDAYSRCGHIELSHQVFE---KIPSPNVVCFTSIMNGYSRNGMGREALDMLEVM 509
+ CSL+ A G++EL E KI N + + N Y+ G EV
Sbjct: 539 VIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWN------EVA 592
Query: 510 IQRGLIPDKVTFLCVLAGCNH---SGMVKE---GQLVFNSMKSVYGIDADRQHYSCMIDM 563
R L+ DK + + GC+ +V E G + +YG+ + M +
Sbjct: 593 KTRALLNDKG--MKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEE------MEVL 644
Query: 564 LGRAGILDKAEELLQQ 579
L +AG + E+LQ+
Sbjct: 645 LEKAGFVPDTSEVLQE 660
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 165/304 (54%), Gaps = 1/304 (0%)
Query: 39 NPQLNIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLY 98
+P ++ S I + G++ +A+KLFDE+P +D+V++N +ISG + + K+AL L+
Sbjct: 195 SPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELF 254
Query: 99 DEMVSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRM 158
+M+ ++ ST +V+S C+ +G G Q+H + GFG NL I + L+DLY +
Sbjct: 255 KDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKC 314
Query: 159 GPSVRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMV 218
G A LF+ LP +++ +WN ++ + ++ E L ++ +M G PN ++ ++
Sbjct: 315 GELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSIL 374
Query: 219 RGCSIGMLLDEGKQLHSHVIK-LGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDD 277
C+ +D G+ +H ++ K L V + +L+D Y+ CG + A + F+ I
Sbjct: 375 PACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKS 434
Query: 278 VISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHG 337
+ SWN+++ +A + + +LF RM+ +P +FV L+ S +G + G+ I
Sbjct: 435 LSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFR 494
Query: 338 YVTK 341
+T+
Sbjct: 495 TMTQ 498
>sp|Q9LR69|PPR8_ARATH Pentatricopeptide repeat-containing protein At1g03540
OS=Arabidopsis thaliana GN=PCMP-E4 PE=2 SV=1
Length = 609
Score = 275 bits (703), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 166/580 (28%), Positives = 297/580 (51%), Gaps = 11/580 (1%)
Query: 87 KFRHPKQALYLYDEMVSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLY 146
K +A+ + + S I + ++S+L C+ + GIQ H V+ G +
Sbjct: 38 KLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRN 97
Query: 147 IGSPLVDLYMRMGPSVRALD-LFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAE 205
+G+ L+ LY ++GP +R +FD ++ +W M+ + + L ++ +M +
Sbjct: 98 VGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSF 157
Query: 206 GVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIE 265
G++ N + V+ CS + G+ H VI G+ + N F+++ L Y ++
Sbjct: 158 GLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGF-EWNHFISSTLAYLYGVNREPVD 216
Query: 266 AKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFFRMQLCRKR-PSIRSFVEFLNFAS 324
A++ FD +P DVI W +++S ++ DL +AL LF+ M + P +F L
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 325 RTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCN 384
+ GK+IHG + G +V V+S+L DMYGKC + + VF ++ +
Sbjct: 277 NLRRLKQGKEIHGKLITNGIG-SNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWS 335
Query: 385 SLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAI 444
+L+ +G + A+E+F M ++ D T LKA + A+ LG + +H +
Sbjct: 336 ALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLG--KEIHGQYV 389
Query: 445 KSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALD 504
+ G N+ V +L+D Y + G I+ + +V+ K+ N++ + ++++ ++NG G EA+
Sbjct: 390 RRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVS 449
Query: 505 MLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDML 564
M+++G+ PD ++F+ +L C H+GMV EG+ F M YGI +HYSCMID+L
Sbjct: 450 FFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLL 509
Query: 565 GRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHGN-EIIGRRVANILMELEPVDFAVY 623
GRAG+ ++AE LL++ D +W LL C + + + R+A +MELEP Y
Sbjct: 510 GRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSY 569
Query: 624 SQVSNFYSEIGEFEVSMQIRETALARKLTRDIGHSLIEVN 663
+SN Y IG ++ IR+ + R + + +G S I+ +
Sbjct: 570 VLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWIDAH 609
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 214/437 (48%), Gaps = 14/437 (3%)
Query: 60 LNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVLSV 119
+ +++FD +D +++ ++SG + +AL ++ EMVS G+ + T SS +
Sbjct: 113 MRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKA 172
Query: 120 CSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATW 179
CS G G H V++ GF N +I S L LY V A +FDE+PE ++ W
Sbjct: 173 CSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICW 232
Query: 180 NLMLRAFCELSRPDEVLRMYNKM-KAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVI 238
+L AF + +E L ++ M + +G+ P+G +F ++ C L +GK++H +I
Sbjct: 233 TAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLI 292
Query: 239 KLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDAL 298
G + N+ V ++L+D Y CGS+ EA++ F+ + + +SW++++ Y A+
Sbjct: 293 TNG-IGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAI 351
Query: 299 ELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDM 358
E+F M+ + F L + V GK+IHG + G G+V V+SAL D+
Sbjct: 352 EIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGC-FGNVIVESALIDL 406
Query: 359 YGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTL 418
YGK I+S+ V+ R++ N+++++L +G ++AV F MV +GI D ++
Sbjct: 407 YGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISF 466
Query: 419 STTLKALSVSASANLGS---CRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVF 475
L A + + G + IK G E SC ++D R G E + +
Sbjct: 467 IAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEH---YSC-MIDLLGRAGLFEEAENLL 522
Query: 476 EKIPSPNVVCFTSIMNG 492
E+ N ++ G
Sbjct: 523 ERAECRNDASLWGVLLG 539
Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 190/424 (44%), Gaps = 26/424 (6%)
Query: 186 FCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDV 245
C+L + E +R+ N + + + +++ C+ G Q H+HV+K G ++
Sbjct: 36 LCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSG-LET 94
Query: 246 NIFVANALVDFYSACG-SLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFFRM 304
+ V N+L+ Y G + E ++ FD V D ISW S++S Y ALE+F M
Sbjct: 95 DRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEM 154
Query: 305 QLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNV 364
+ + + S G V G+ HG V GF+ + S L +YG
Sbjct: 155 VSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHF-ISSTLAYLYGVNRE 213
Query: 365 IESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGL--DEVTLSTTL 422
+ VF+ P + C +++++ + ++A+ +F + + G GL D T T L
Sbjct: 214 PVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLF-YAMHRGKGLVPDGSTFGTVL 272
Query: 423 KALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPN 482
A L + +H I +G SN+ V SL+D Y +CG + + QVF + N
Sbjct: 273 TA--CGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKN 330
Query: 483 VVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFN 542
V +++++ GY +NG +A+++ M ++ D F VL C V+ G
Sbjct: 331 SVSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLG----- 381
Query: 543 SMKSVYGIDADRQHY------SCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLLRSC 596
K ++G R + S +ID+ G++G +D A + + + + W+++L +
Sbjct: 382 --KEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMS-IRNMITWNAMLSAL 438
Query: 597 RVHG 600
+G
Sbjct: 439 AQNG 442
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 43 NIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMV 102
N+ + ID + KSG ++SA +++ +M R+M+T+N ++S + ++A+ +++MV
Sbjct: 396 NVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMV 455
Query: 103 SHGIKESASTFSSVLSVCSNAGFYTEG---IQIHCRVLSLGFGLNLYIGSPLVDLYMRMG 159
GIK +F ++L+ C + G EG + + + G Y S ++DL R G
Sbjct: 456 KKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHY--SCMIDLLGRAG 513
Query: 160 PSVRALDLFDELPERNLAT-WNLML 183
A +L + RN A+ W ++L
Sbjct: 514 LFEEAENLLERAECRNDASLWGVLL 538
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 272 bits (695), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 173/608 (28%), Positives = 311/608 (51%), Gaps = 11/608 (1%)
Query: 58 GHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEM-VSHGIKESASTFSSV 116
G + A+ +F + D+ +N+L+ G P +L ++ + S +K ++ST++
Sbjct: 66 GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFA 125
Query: 117 LSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNL 176
+S S G IH + + G L +GS +V +Y + A +FD +PE++
Sbjct: 126 ISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDT 185
Query: 177 ATWNLMLRAFCELSRPDEVLRMYNKMKAEG-VEPNGLSFCYMVRGCSIGMLLDEGKQLHS 235
WN M+ + + E ++++ + E + + ++ + L G Q+HS
Sbjct: 186 ILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS 245
Query: 236 HVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIF 295
K G + +V + YS CG + F D++++N+++ Y
Sbjct: 246 LATKTGCYSHD-YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETE 304
Query: 296 DALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGF-DHGSVHVQSA 354
+L LF + L R + V + +G++ IHGY K F H SV +A
Sbjct: 305 LSLSLFKELMLSGARLRSSTLVSLVPV---SGHLMLIYAIHGYCLKSNFLSHASV--STA 359
Query: 355 LTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLD 414
LT +Y K N IES+ +F+ +P +SL N++++ +G +DA+ +F M +
Sbjct: 360 LTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPN 419
Query: 415 EVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQV 474
VT++ L A + + +LG + +H + FES+I VS +L+ Y++CG I + ++
Sbjct: 420 PVTITCILSACAQLGALSLG--KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRL 477
Query: 475 FEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMV 534
F+ + N V + ++++GY +G G+EAL++ M+ G+ P VTFLCVL C+H+G+V
Sbjct: 478 FDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLV 537
Query: 535 KEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLLR 594
KEG +FNSM YG + +HY+CM+D+LGRAG L +A + ++ +W +LL
Sbjct: 538 KEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLG 597
Query: 595 SCRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQIRETALARKLTRD 654
+CR+H + + R V+ L EL+P + + +SN +S + + +R+TA RKL +
Sbjct: 598 ACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKA 657
Query: 655 IGHSLIEV 662
G++LIE+
Sbjct: 658 PGYTLIEI 665
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/492 (22%), Positives = 234/492 (47%), Gaps = 24/492 (4%)
Query: 131 QIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATWNLMLRAFCELS 190
Q H +++ GF ++ + + L +G A D+F + ++ +N+++R F
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 191 RPDEVLRMYNKM-KAEGVEPNGLSFCYMVRGCSIGMLLDE-GKQLHSHVIKLGWVDVNIF 248
P L ++ + K+ ++PN ++ + + S G D G+ +H + G D +
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAAS-GFRDDRAGRVIHGQAVVDG-CDSELL 155
Query: 249 VANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFFRM--QL 306
+ + +V Y + +A+K FD +P D I WN+++S Y ++ +++++F + +
Sbjct: 156 LGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINES 215
Query: 307 CRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLG-FDHGSVHVQSALTDMYGKCNVI 365
C R + ++ L + + G QIH TK G + H +V + +Y KC I
Sbjct: 216 C-TRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHD--YVLTGFISLYSKCGKI 272
Query: 366 ESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLKAL 425
+ A+F + N+++ +G + ++ +F ++ G L S+TL +L
Sbjct: 273 KMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLR----SSTLVSL 328
Query: 426 SVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVC 485
V S +L +H +KS F S+ +VS +L YS+ IE + ++F++ P ++
Sbjct: 329 -VPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS 387
Query: 486 FTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMK 545
+ ++++GY++NG+ +A+ + M + P+ VT C+L+ C G + G+ V + ++
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVR 447
Query: 546 SVYGIDADRQHY--SCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHGNEI 603
S D + Y + +I M + G + +A L + + W++++ +HG
Sbjct: 448 ST---DFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNE-VTWNTMISGYGLHGQ-- 501
Query: 604 IGRRVANILMEL 615
G+ NI E+
Sbjct: 502 -GQEALNIFYEM 512
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 191/426 (44%), Gaps = 7/426 (1%)
Query: 54 FVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHG-IKESAST 112
+ K + A+K+FD MP +D + +N +ISG K +++ ++ ++++ + +T
Sbjct: 164 YFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTT 223
Query: 113 FSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELP 172
+L + G+QIH G + Y+ + + LY + G LF E
Sbjct: 224 LLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFR 283
Query: 173 ERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQ 232
+ ++ +N M+ + + L ++ ++ G + +V ML+
Sbjct: 284 KPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YA 340
Query: 233 LHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYD 292
+H + +K ++ + V+ AL YS + A+K FD P + SWN+++S Y
Sbjct: 341 IHGYCLKSNFLS-HASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNG 399
Query: 293 LIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQ 352
L DA+ LF MQ P+ + L+ ++ G + GK +H V F+ S++V
Sbjct: 400 LTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFE-SSIYVS 458
Query: 353 SALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIG 412
+AL MY KC I + +F+ ++ N++++ G ++A+ +F M++ GI
Sbjct: 459 TALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGIT 518
Query: 413 LDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSH 472
VT L A S + G + + + GFE ++ ++D R GH++ +
Sbjct: 519 PTPVTFLCVLYACSHAGLVKEGD-EIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRAL 577
Query: 473 QVFEKI 478
Q E +
Sbjct: 578 QFIEAM 583
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 142/297 (47%), Gaps = 9/297 (3%)
Query: 17 APTCTSIVPLSSSLLL----DSYCQPNPQLNIYSSNRTIDD-FVKSGHLNSAKKLFDEMP 71
+ T S+VP+S L+L YC + L+ S + + + K + SA+KLFDE P
Sbjct: 322 SSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESP 381
Query: 72 ARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVLSVCSNAGFYTEGIQ 131
+ + ++N +ISG + + A+ L+ EM + T + +LS C+ G + G
Sbjct: 382 EKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKW 441
Query: 132 IHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATWNLMLRAFCELSR 191
+H V S F ++Y+ + L+ +Y + G A LFD + ++N TWN M+ + +
Sbjct: 442 VHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQ 501
Query: 192 PDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVAN 251
E L ++ +M G+ P ++F ++ CS L+ EG ++ + +I + ++
Sbjct: 502 GQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYA 561
Query: 252 ALVDFYSACGSLIEAKKSFDFIPVDDVIS-WNSIVS---IYADYDLIFDALELFFRM 304
+VD G L A + + + ++ S W +++ I+ D +L E F +
Sbjct: 562 CMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFEL 618
>sp|Q9SJ73|PP148_ARATH Pentatricopeptide repeat-containing protein At2g04860
OS=Arabidopsis thaliana GN=PCMP-E74 PE=2 SV=3
Length = 692
Score = 271 bits (694), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 176/602 (29%), Positives = 311/602 (51%), Gaps = 13/602 (2%)
Query: 44 IYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVS 103
+Y ++ ++K G + SA+ LFDEMP RD V +N LI G + + A L+ M+
Sbjct: 85 VYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQ 144
Query: 104 HGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVR 163
G SA+T ++L C GF ++G +H G L+ + + L+ Y +
Sbjct: 145 QGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGS 204
Query: 164 ALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSI 223
A LF E+ +++ +WN M+ A+ + +E + ++ M + VE + ++ ++
Sbjct: 205 AEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHV- 263
Query: 224 GMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNS 283
+ LH V+K G V+ +I V +LV YS CG L+ A++ + D ++ S
Sbjct: 264 -----SHEPLHCLVVKCGMVN-DISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTS 317
Query: 284 IVSIYADYDLIFDALELFFRM-QLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKL 342
IVS YA+ + A+ F + QLC K ++ + V L+ ++ ++ G +HGY K
Sbjct: 318 IVSCYAEKGDMDIAVVYFSKTRQLCMKIDAV-ALVGILHGCKKSSHIDIGMSLHGYAIKS 376
Query: 343 GFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEM 402
G ++ V +T MY K + +E+ + +FE L NS+++ + SG A E+
Sbjct: 377 GLCTKTLVVNGLIT-MYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEV 435
Query: 403 F-GFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDA 461
F M+ G+ D +T+++ L S NLG + LH +++ FE+ V +L+D
Sbjct: 436 FHQMMLTGGLLPDAITIASLLAGCSQLCCLNLG--KELHGYTLRNNFENENFVCTALIDM 493
Query: 462 YSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTF 521
Y++CG+ + VF+ I +P + S+++GYS +G+ AL M ++GL PD++TF
Sbjct: 494 YAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITF 553
Query: 522 LCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTP 581
L VL+ CNH G V EG++ F +M +GI QHY+ M+ +LGRA + +A L+ +
Sbjct: 554 LGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMD 613
Query: 582 GGGDCMMWSSLLRSCRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQ 641
D +W +LL +C +H +G VA + L+ + +Y +SN Y+ ++ ++
Sbjct: 614 IKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVR 673
Query: 642 IR 643
+R
Sbjct: 674 VR 675
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 119/515 (23%), Positives = 237/515 (46%), Gaps = 26/515 (5%)
Query: 73 RDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVLSVCSNA--GFYTEGI 130
RD+ ++ L+ C + ++ +++ + + T S L + + F +
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 131 QIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATWNLMLRAFCELS 190
Q+ + G +Y+ + L++LY++ G A LFDE+PER+ WN ++ +
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 191 RPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVA 250
+ +++ M +G P+ + ++ C + +G+ +H K G ++++ V
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSG-LELDSQVK 189
Query: 251 NALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFFRMQLCRKR 310
NAL+ FYS C L A+ F + +SWN+++ Y+ L +A+ +F M K
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNM--FEKN 247
Query: 311 PSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVA 370
I S V +N S + + +H V K G + + V ++L Y +C + S+
Sbjct: 248 VEI-SPVTIINLLSAHVS---HEPLHCLVVKCGMVN-DISVVTSLVCAYSRCGCLVSAER 302
Query: 371 VFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSAS 430
++ SA S+ S+++ G++ AV F + +D V L L S+
Sbjct: 303 LYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSH 362
Query: 431 ANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIM 490
++G LH AIKSG + V L+ YS+ +E +FE++ ++ + S++
Sbjct: 363 IDIGMS--LHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVI 420
Query: 491 NGYSRNGMGREALDML-EVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYG 549
+G ++G A ++ ++M+ GL+PD +T +LAGC+ + G K ++G
Sbjct: 421 SGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLG-------KELHG 473
Query: 550 I----DADRQHYSC--MIDMLGRAGILDKAEELLQ 578
+ + +++ C +IDM + G +AE + +
Sbjct: 474 YTLRNNFENENFVCTALIDMYAKCGNEVQAESVFK 508
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 181/390 (46%), Gaps = 26/390 (6%)
Query: 231 KQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYAD 290
+Q+ +H+ K G +D ++V +L++ Y G + A+ FD +P D + WN+++ Y+
Sbjct: 70 EQVQTHLTKSG-LDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSR 128
Query: 291 YDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVH 350
DA +LF M PS + V L F + G V G+ +HG K G + S
Sbjct: 129 NGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDS-Q 187
Query: 351 VQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEG 410
V++AL Y KC + S+ +F +S N+++ + SG ++A+ +F M ++
Sbjct: 188 VKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKN 247
Query: 411 IGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIEL 470
+ + VT+ L A VS LHC +K G ++I+V SL+ AYSRCG +
Sbjct: 248 VEISPVTIINLLSA-HVSHEP-------LHCLVVKCGMVNDISVVTSLVCAYSRCGCLVS 299
Query: 471 SHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNH 530
+ +++ ++V TSI++ Y+ G A+ Q + D V + +L GC
Sbjct: 300 AERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKK 359
Query: 531 SGMVKEGQLVFN-SMKSVYGIDADRQHYSCMIDMLGRAGILDKAE------ELLQQTPGG 583
S + G + ++KS G+ + +I M + D E E LQ+TP
Sbjct: 360 SSHIDIGMSLHGYAIKS--GLCTKTLVVNGLITMYSK---FDDVETVLFLFEQLQETP-- 412
Query: 584 GDCMMWSSLLRSCRVHGNEIIGRRVANILM 613
+ W+S++ C G V + +M
Sbjct: 413 --LISWNSVISGCVQSGRASTAFEVFHQMM 440
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 99/202 (49%), Gaps = 1/202 (0%)
Query: 378 RSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCR 437
R L +SL+ S +H + +F ++ + + T+S L+A + S ++
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 438 LLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNG 497
+ KSG + + V SL++ Y + G + + +F+++P + V + +++ GYSRNG
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 498 MGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHY 557
+A + VM+Q+G P T + +L C G V +G+ V + + + G++ D Q
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSV-HGVAAKSGLELDSQVK 189
Query: 558 SCMIDMLGRAGILDKAEELLQQ 579
+ +I + L AE L ++
Sbjct: 190 NALISFYSKCAELGSAEVLFRE 211
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 270 bits (690), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 172/603 (28%), Positives = 303/603 (50%), Gaps = 6/603 (0%)
Query: 63 AKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVLSVCSN 122
A+++F EM R + +N L+ + + ++ LY + M K T L C
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 123 AGFYTEGIQIHCRVLS-LGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATWNL 181
G IH V + G +LY+GS L+ +Y++ G + AL +FDEL + ++ TW+
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 182 MLRAFCELSRPDEVLRMYNKM-KAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKL 240
M+ F + P + + + +M A V P+ ++ +V C+ G+ +H VI+
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 241 GWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALEL 300
G+ + ++ + N+L++ Y+ + EA F I DVISW+++++ Y +AL +
Sbjct: 193 GFSN-DLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLV 251
Query: 301 FFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYG 360
F M P++ + + L + ++ G++ H + G + V V +AL DMY
Sbjct: 252 FNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLE-TEVKVSTALVDMYM 310
Query: 361 KCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLST 420
KC E + AVF P + + +L++ +G ++E F M+ E + L
Sbjct: 311 KCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMV 370
Query: 421 TLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPS 480
+ S S L + H IK GF+SN + SL++ YSRCG + + +VF I
Sbjct: 371 KVLG-SCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIAL 429
Query: 481 PNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLI-PDKVTFLCVLAGCNHSGMVKEGQL 539
+ V +TS++ GY +G G +AL+ M++ + P++VTFL +L+ C+H+G++ EG
Sbjct: 430 KDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLR 489
Query: 540 VFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVH 599
+F M + Y + + +HY+ ++D+LGR G LD A E+ ++ P + +LL +CR+H
Sbjct: 490 IFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIH 549
Query: 600 GNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQIRETALARKLTRDIGHSL 659
N + VA L ELE Y +SN Y GE+E ++R + R + + + SL
Sbjct: 550 QNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESL 609
Query: 660 IEV 662
IE+
Sbjct: 610 IEI 612
Score = 183 bits (464), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 234/448 (52%), Gaps = 9/448 (2%)
Query: 157 RMGPSVRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCY 216
+ SV A +F E+ +R+L WN +L++ + +EVL ++ M + +P+ +
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 217 MVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVD 276
++ C ++ G+ +H V K + +++V ++L+ Y CG +IEA + FD +
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 277 DVISWNSIVSIYADYDLIFDALELFFRMQLCRK-RPSIRSFVEFLNFASRTGNVYFGKQI 335
D+++W+S+VS + + A+E F RM + P + + ++ ++ N G+ +
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185
Query: 336 HGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGN 395
HG+V + GF + + + ++L + Y K + +V +F+ + + ++++ + +G
Sbjct: 186 HGFVIRRGFSN-DLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGA 244
Query: 396 IKDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASA-NLGSCRLLHCCAIKSGFESNIAV 454
+A+ +F M+D+G E ++T L L A+A +L R H AI+ G E+ + V
Sbjct: 245 AAEALLVFNDMMDDGT---EPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKV 301
Query: 455 SCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVM-IQRG 513
S +L+D Y +C E ++ VF +IP +VV + ++++G++ NGM +++ +M ++
Sbjct: 302 STALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENN 361
Query: 514 LIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKA 573
PD + + VL C+ G +++ + F+S YG D++ + ++++ R G L A
Sbjct: 362 TRPDAILMVKVLGSCSELGFLEQAK-CFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNA 420
Query: 574 EELLQQTPGGGDCMMWSSLLRSCRVHGN 601
++ D ++W+SL+ +HG
Sbjct: 421 SKVFNGI-ALKDTVVWTSLITGYGIHGK 447
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 133/568 (23%), Positives = 256/568 (45%), Gaps = 30/568 (5%)
Query: 8 PRVRTITTLAPTCTSIVPLSSSLLLDSYCQPNPQL--NIYSSNRTIDDFVKSGHLNSAKK 65
P T+ C + ++ ++ + + + L ++Y + I ++K G + A +
Sbjct: 58 PDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALR 117
Query: 66 LFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMV-SHGIKESASTFSSVLSVCSNAG 124
+FDE+ D+VT++ ++SG K P QA+ + MV + + T +++S C+
Sbjct: 118 MFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLS 177
Query: 125 FYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATWNLMLR 184
G +H V+ GF +L + + L++ Y + A++LF + E+++ +W+ ++
Sbjct: 178 NSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIA 237
Query: 185 AFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVD 244
+ + E L ++N M +G EPN + +++ C+ L++G++ H I+ G ++
Sbjct: 238 CYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKG-LE 296
Query: 245 VNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFFRM 304
+ V+ ALVD Y C S EA F IP DV+SW +++S + + ++E F M
Sbjct: 297 TEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIM 356
Query: 305 QL-CRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCN 363
L RP V+ L S G + K H YV K GFD + ++L ++Y +C
Sbjct: 357 LLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPF-IGASLVELYSRCG 415
Query: 364 VIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEG-IGLDEVTLSTTL 422
+ ++ VF + SL+T G A+E F MV + +EVT + L
Sbjct: 416 SLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSIL 475
Query: 423 KALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIP-SP 481
A S + + G R+ N+ L+D R G ++ + ++ +++P SP
Sbjct: 476 SACSHAGLIHEG-LRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSP 534
Query: 482 NVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVF 541
+++ G R + Q G + + V NH+G +
Sbjct: 535 TPQILGTLL-GACR-------------IHQNGEMAETVAKKLFELESNHAGY-------Y 573
Query: 542 NSMKSVYGIDADRQHYSCMIDMLGRAGI 569
M +VYG+ + ++ + + + + GI
Sbjct: 574 MLMSNVYGVKGEWENVEKLRNSVKQRGI 601
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 269 bits (687), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 177/591 (29%), Positives = 303/591 (51%), Gaps = 16/591 (2%)
Query: 84 GCGKFRHPKQ---ALYLYDEMVSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLG 140
G ++ H Q L + +MV ++ TF +L+ G Q+HC L LG
Sbjct: 286 GLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLG 345
Query: 141 FGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYN 200
L L + + L+++Y ++ A +FD + ER+L +WN ++ + E + ++
Sbjct: 346 LDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFM 405
Query: 201 KMKAEGVEPNGLSFCYMVRGCSIGMLLDEG----KQLHSHVIKLGWVDVNIFVANALVDF 256
++ G++P+ + +++ S L EG KQ+H H IK+ V + FV+ AL+D
Sbjct: 406 QLLRCGLKPDQYTMTSVLKAASS---LPEGLSLSKQVHVHAIKINNVS-DSFVSTALIDA 461
Query: 257 YSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSF 316
YS + EA+ F+ D +++WN++++ Y L+LF M +R +
Sbjct: 462 YSRNRCMKEAEILFERHNFD-LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTL 520
Query: 317 VEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAP 376
+ GKQ+H Y K G+D + V S + DMY KC + ++ F+S P
Sbjct: 521 ATVFKTCGFLFAINQGKQVHAYAIKSGYDL-DLWVSSGILDMYVKCGDMSAAQFAFDSIP 579
Query: 377 GRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSC 436
++++ + +G + A +F M G+ DE T++T KA S + G
Sbjct: 580 VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQG-- 637
Query: 437 RLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRN 496
R +H A+K ++ V SL+D Y++CG I+ ++ +F++I N+ + +++ G +++
Sbjct: 638 RQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQH 697
Query: 497 GMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQH 556
G G+E L + + M G+ PDKVTF+ VL+ C+HSG+V E SM YGI + +H
Sbjct: 698 GEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEH 757
Query: 557 YSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHGNEIIGRRVANILMELE 616
YSC+ D LGRAG++ +AE L++ M+ +LL +CRV G+ G+RVA L+ELE
Sbjct: 758 YSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELE 817
Query: 617 PVDFAVYSQVSNFYSEIGEFEVSMQIRETALARKLTRDIGHSLIEV-NSCH 666
P+D + Y +SN Y+ +++ R K+ +D G S IEV N H
Sbjct: 818 PLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIH 868
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 155/636 (24%), Positives = 289/636 (45%), Gaps = 52/636 (8%)
Query: 37 QPNPQLNIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGK-----FRHP 91
+ NP+ + N I + K G L A+++FD+MP RD+V++N +++ + +
Sbjct: 69 EENPER--FLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENI 126
Query: 92 KQALYLYDEMVSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPL 151
+QA L+ + + S T S +L +C ++G+ H +G + ++ L
Sbjct: 127 QQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGAL 186
Query: 152 VDLYMRMGPSVRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNG 211
V++Y++ G LF+E+P R++ WNLML+A+ E+ +E + + + + G+ PN
Sbjct: 187 VNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNE 246
Query: 212 LSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFD 271
++ + R D+ S G + D
Sbjct: 247 ITLRLLARISG-----DD----------------------------SDAGQVKSFANGND 273
Query: 272 FIPVDDVISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYF 331
V ++I N +S Y L+ F M +F+ L A + ++
Sbjct: 274 ASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLAL 333
Query: 332 GKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLL 391
G+Q+H KLG D + V ++L +MY K + VF++ R L NS++ +
Sbjct: 334 GQQVHCMALKLGLDL-MLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392
Query: 392 HSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESN 451
+G +AV +F ++ G+ D+ T+++ LKA S S L + +H AIK S+
Sbjct: 393 QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS-SLPEGLSLSKQVHVHAIKINNVSD 451
Query: 452 IAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQ 511
VS +L+DAYSR ++ + +FE+ + ++V + ++M GY+++ G + L + +M +
Sbjct: 452 SFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHK 510
Query: 512 RGLIPDKVTFLCVLAGCNHSGMVKEGQLVFN-SMKSVYGIDADRQHYSCMIDMLGRAGIL 570
+G D T V C + +G+ V ++KS G D D S ++DM + G +
Sbjct: 511 QGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKS--GYDLDLWVSSGILDMYVKCGDM 568
Query: 571 DKAEELLQQTPGGGDCMMWSSLLRSCRVHGNEIIGRRVANI--LMELEPVDFAVYSQVSN 628
A+ P D + W++++ C +G E V + LM + P +F + + ++
Sbjct: 569 SAAQFAFDSIPVPDD-VAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTI-ATLAK 626
Query: 629 FYSEIGEFEVSMQIRETALARKLTRD--IGHSLIEV 662
S + E QI AL T D +G SL+++
Sbjct: 627 ASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDM 662
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/473 (23%), Positives = 208/473 (43%), Gaps = 57/473 (12%)
Query: 133 HCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATWNLMLRAF-----C 187
H R+L+ ++ + L+ +Y + G A +FD++P+R+L +WN +L A+ C
Sbjct: 62 HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121
Query: 188 ELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNI 247
+ + ++ ++ + V + ++ M++ C + + H + K+G +D +
Sbjct: 122 VVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIG-LDGDE 180
Query: 248 FVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADYDLIFDALEL---FFRM 304
FVA ALV+ Y G + E K F+ +P DV+ WN ++ Y + +A++L F
Sbjct: 181 FVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSS 240
Query: 305 QLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNV 364
L ++R S G Q+ + G D SV
Sbjct: 241 GLNPNEITLRLLARISGDDSDAG------QVKSFAN--GNDASSV--------------- 277
Query: 365 IESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLKA 424
S +F N ++ LHSG ++ F MV+ + D+VT L
Sbjct: 278 ---SEIIFR----------NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLAT 324
Query: 425 LSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVV 484
S LG + +HC A+K G + + VS SL++ Y + + VF+ + +++
Sbjct: 325 AVKVDSLALG--QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLI 382
Query: 485 CFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSM 544
+ S++ G ++NG+ EA+ + +++ GL PD+ T VL + + EG L +
Sbjct: 383 SWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEG-LSLSKQ 438
Query: 545 KSVYGID----ADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLL 593
V+ I +D + +ID R + +AE L ++ D + W++++
Sbjct: 439 VHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERH--NFDLVAWNAMM 489
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 10/209 (4%)
Query: 319 FLNFASRTGNVYFGKQIHGYVTKLGFDHGSVH-VQSALTDMYGKCNVIESSVAVFESAPG 377
FL A + ++ GK H + L F+ + + L MY KC + + VF+ P
Sbjct: 45 FLRNAITSSDLMLGKCTHARI--LTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPD 102
Query: 378 RSLECCNSLMTSLLHSG-----NIKDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASAN 432
R L NS++ + S NI+ A +F + + + +TLS LK S
Sbjct: 103 RDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKL--CLHSGY 160
Query: 433 LGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNG 492
+ + H A K G + + V+ +L++ Y + G ++ +FE++P +VV + ++
Sbjct: 161 VWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKA 220
Query: 493 YSRNGMGREALDMLEVMIQRGLIPDKVTF 521
Y G EA+D+ GL P+++T
Sbjct: 221 YLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 267 bits (683), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 178/619 (28%), Positives = 323/619 (52%), Gaps = 13/619 (2%)
Query: 51 IDDFVKSGHLNSAKKLFDEMPAR-DMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKES 109
ID + K G A ++F E+ + ++V +N++I G G + +L LY ++ +K
Sbjct: 212 IDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLV 271
Query: 110 ASTFSSVLSVCS---NAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALD 166
+++F+ L CS N+GF G QIHC V+ +G + Y+ + L+ +Y + G A
Sbjct: 272 STSFTGALGACSQSENSGF---GRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAET 328
Query: 167 LFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGML 226
+F + ++ L WN M+ A+ E L ++ M+ + V P+ + ++ CS+ L
Sbjct: 329 VFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGL 388
Query: 227 LDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVS 286
+ GK +H+ + K + + +AL+ YS CG +A F + D+++W S++S
Sbjct: 389 YNYGKSVHAELFKRP-IQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLIS 447
Query: 287 IYADYDLIFDALELFFRMQLCRK--RPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGF 344
+AL++F M+ +P N + + FG Q+HG + K G
Sbjct: 448 GLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGL 507
Query: 345 DHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFG 404
+V V S+L D+Y KC + E ++ VF S ++ NS+++ + + ++++F
Sbjct: 508 VL-NVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFN 566
Query: 405 FMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSR 464
M+ +GI D V++++ L A+S +AS G + LH ++ G S+ + +L+D Y +
Sbjct: 567 LMLSQGIFPDSVSITSVLVAISSTASLLKG--KSLHGYTLRLGIPSDTHLKNALIDMYVK 624
Query: 465 CGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCV 524
CG + + +F+K+ +++ + ++ GY +G AL + + M + G PD VTFL +
Sbjct: 625 CGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSL 684
Query: 525 LAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGG 584
++ CNHSG V+EG+ +F MK YGI+ + +HY+ M+D+LGRAG+L++A ++ P
Sbjct: 685 ISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEA 744
Query: 585 DCMMWSSLLRSCRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQIRE 644
D +W LL + R H N +G A L+ +EP + Y Q+ N Y E G + ++
Sbjct: 745 DSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLG 804
Query: 645 TALARKLTRDIGHSLIEVN 663
+ L + G S IEV+
Sbjct: 805 LMKEKGLHKQPGCSWIEVS 823
Score = 216 bits (551), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 162/613 (26%), Positives = 300/613 (48%), Gaps = 21/613 (3%)
Query: 3 STKLLPRVRTITTLAPTCTSIVPLS-SSLLLDSYCQPNPQLNIYSSNRTIDDFVKSGHLN 61
S+ V T +L C+++ LS + S + + + + ++ +VK G L+
Sbjct: 53 SSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLD 112
Query: 62 SAKKLFDE-------MPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFS 114
A ++FD + ARD+ +N +I G KFR K+ + + M+ G++ A + S
Sbjct: 113 YAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLS 172
Query: 115 SVLSVCSNAGFY--TEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELP 172
V+SV G + EG QIH +L + ++ + L+D+Y + G S+ A +F E+
Sbjct: 173 IVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIE 232
Query: 173 ER-NLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGK 231
++ N+ WN+M+ F + L +Y K V+ SF + CS G+
Sbjct: 233 DKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGR 292
Query: 232 QLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYADY 291
Q+H V+K+G + + +V +L+ YS CG + EA+ F + + WN++V+ YA+
Sbjct: 293 QIHCDVVKMG-LHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAEN 351
Query: 292 DLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHV 351
D + AL+LF M+ P + ++ S G +GK +H + K S +
Sbjct: 352 DYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTST-I 410
Query: 352 QSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGI 411
+SAL +Y KC + VF+S + + SL++ L +G K+A+++FG M D+
Sbjct: 411 ESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDD- 469
Query: 412 GLDEVTLSTTLKALSVSASANLGSCRL---LHCCAIKSGFESNIAVSCSLMDAYSRCGHI 468
D + + + +A A L + R +H IK+G N+ V SL+D YS+CG
Sbjct: 470 --DSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLP 527
Query: 469 ELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGC 528
E++ +VF + + N+V + S+++ YSRN + ++D+ +M+ +G+ PD V+ VL
Sbjct: 528 EMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAI 587
Query: 529 NHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMM 588
+ + + +G+ + + GI +D + +IDM + G AE + ++ +
Sbjct: 588 SSTASLLKGKSLHGYTLRL-GIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQ-HKSLIT 645
Query: 589 WSSLLRSCRVHGN 601
W+ ++ HG+
Sbjct: 646 WNLMIYGYGSHGD 658
Score = 159 bits (403), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 139/524 (26%), Positives = 247/524 (47%), Gaps = 24/524 (4%)
Query: 93 QALYLYDEM-VSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPL 151
QAL+LY + S S TF S+L CS + G IH V+ LG+ + +I + L
Sbjct: 42 QALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSL 101
Query: 152 VDLYMRMGPSVRALDLFDELPE-------RNLATWNLMLRAFCELSRPDEVLRMYNKMKA 204
V++Y++ G A+ +FD + R++ WN M+ + + R E + + +M
Sbjct: 102 VNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLV 161
Query: 205 EGVEPNGLSFCYMVR-GCSIGML-LDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGS 262
GV P+ S +V C G +EGKQ+H +++ +D + F+ AL+D Y G
Sbjct: 162 FGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNS-LDTDSFLKTALIDMYFKFGL 220
Query: 263 LIEAKKSFDFIPVDD---VISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEF 319
I+A + F+ ++D V+ WN ++ + + +L+L+ + + SF
Sbjct: 221 SIDAWRV--FVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGA 278
Query: 320 LNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRS 379
L S++ N FG+QIH V K+G H +V ++L MY KC ++ + VF +
Sbjct: 279 LGACSQSENSGFGRQIHCDVVKMGL-HNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKR 337
Query: 380 LECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLL 439
LE N+++ + + A+++FGFM + + D TLS + SV N G + +
Sbjct: 338 LEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYG--KSV 395
Query: 440 HCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVVCFTSIMNGYSRNGMG 499
H K +S + +L+ YS+CG ++ VF+ + ++V + S+++G +NG
Sbjct: 396 HAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKF 455
Query: 500 REALDMLEVMI--QRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSMKSVYGIDADRQHY 557
+EAL + M L PD V C ++ G V SM G+ +
Sbjct: 456 KEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVG 514
Query: 558 SCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHGN 601
S +ID+ + G+ + A ++ + + W+S++ SC N
Sbjct: 515 SSLIDLYSKCGLPEMALKVFTSMS-TENMVAWNSMI-SCYSRNN 556
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 155/327 (47%), Gaps = 9/327 (2%)
Query: 6 LLPRVRTITTLAPTCTSIVPLSSSLLLD-SYCQPNPQLNIYSSNRTIDDFVKSGHLNSAK 64
L P +T++ C + L L + S + LN++ + ID + K G A
Sbjct: 472 LKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMAL 531
Query: 65 KLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSHGIKESASTFSSVLSVCSNAG 124
K+F M +MV +N +IS + P+ ++ L++ M+S GI + + +SVL S+
Sbjct: 532 KVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTA 591
Query: 125 FYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELPERNLATWNLMLR 184
+G +H L LG + ++ + L+D+Y++ G S A ++F ++ ++L TWNLM+
Sbjct: 592 SLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIY 651
Query: 185 AFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVD 244
+ L ++++MK G P+ ++F ++ C+ ++EGK + + + ++
Sbjct: 652 GYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIE 711
Query: 245 VNIFVANALVDFYSACGSLIEAKKSFDFIPVD-DVISWNSIVS---IYADYDLIFDALEL 300
N+ +VD G L EA +P++ D W ++S + + +L + E
Sbjct: 712 PNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEK 771
Query: 301 FFRMQLCRKRPSIRSFVEFLNFASRTG 327
RM+ R ++V+ +N G
Sbjct: 772 LLRMEPERG----STYVQLINLYMEAG 794
>sp|Q9LND4|PPR14_ARATH Pentatricopeptide repeat-containing protein At1g06140,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E61 PE=2
SV=1
Length = 558
Score = 266 bits (681), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 160/555 (28%), Positives = 293/555 (52%), Gaps = 13/555 (2%)
Query: 115 SVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDLFDELP-- 172
++L++ S A Q+H +V+ GF + +GS L + Y++ A F+ +P
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 173 ERNLATWNLMLRAFCELSR--PDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLLDEG 230
+RN +WN +L + + +VL +YN+M+ + + + ++ C LL+ G
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 231 KQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSIYAD 290
+H +K G +D + +VA +LV+ Y+ G++ A+K FD IPV + + W ++ Y
Sbjct: 129 ILIHGLAMKNG-LDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLK 187
Query: 291 YDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVY---FGKQIHGYVTKLGFDHG 347
Y + LF M R + + GNV+ GK +HG + F
Sbjct: 188 YSKDPEVFRLFCLM---RDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQ 244
Query: 348 SVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMV 407
S ++Q+++ DMY KC +++++ +FE++ R++ +L++ +A ++F M+
Sbjct: 245 SDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQML 304
Query: 408 DEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGH 467
E I ++ TL+ L +S S+ +L + +H I++G E + S +D Y+RCG+
Sbjct: 305 RESILPNQCTLAAIL--VSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGN 362
Query: 468 IELSHQVFEKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAG 527
I+++ VF+ +P NV+ ++S++N + NG+ EALD M + ++P+ VTF+ +L+
Sbjct: 363 IQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSA 422
Query: 528 CNHSGMVKEGQLVFNSMKSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCM 587
C+HSG VKEG F SM YG+ + +HY+CM+D+LGRAG + +A+ + P
Sbjct: 423 CSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMAS 482
Query: 588 MWSSLLRSCRVHGNEIIGRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQIRETAL 647
W +LL +CR+H + +A L+ +EP +VY +SN Y++ G +E+ +R
Sbjct: 483 AWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMG 542
Query: 648 ARKLTRDIGHSLIEV 662
+ + +G S EV
Sbjct: 543 IKGYRKHVGQSATEV 557
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 193/387 (49%), Gaps = 9/387 (2%)
Query: 54 FVKSGHLNSAKKLFDEMP--ARDMVTYNLLISGCGKFRH--PKQALYLYDEMVSHGIKES 109
+++S L+ A F+ +P R+ ++N ++SG K + L LY+ M H +
Sbjct: 49 YIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHC--DG 106
Query: 110 ASTFSSVLSV--CSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLYMRMGPSVRALDL 167
+F+ V ++ C G GI IH + G + Y+ LV++Y ++G A +
Sbjct: 107 VDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKV 166
Query: 168 FDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSIGMLL 227
FDE+P RN W ++++ + + S+ EV R++ M+ G+ + L+ +V+ C
Sbjct: 167 FDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAG 226
Query: 228 DEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNSIVSI 287
GK +H I+ ++D + ++ +++D Y C L A+K F+ +V+ W +++S
Sbjct: 227 KVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISG 286
Query: 288 YADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHG 347
+A + +A +LF +M P+ + L S G++ GK +HGY+ + G +
Sbjct: 287 FAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMD 346
Query: 348 SVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMV 407
+V+ S DMY +C I+ + VF+ P R++ +S++ + +G ++A++ F M
Sbjct: 347 AVNFTS-FIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMK 405
Query: 408 DEGIGLDEVTLSTTLKALSVSASANLG 434
+ + + VT + L A S S + G
Sbjct: 406 SQNVVPNSVTFVSLLSACSHSGNVKEG 432
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 199/409 (48%), Gaps = 13/409 (3%)
Query: 45 YSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQALYLYDEMVSH 104
Y + ++ + + G + SA+K+FDE+P R+ V + +L+ G K+ + L+ M
Sbjct: 145 YVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDT 204
Query: 105 GIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGF-GLNLYIGSPLVDLYMRMGPSVR 163
G+ A T ++ C N G +H + F + Y+ + ++D+Y++
Sbjct: 205 GLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDN 264
Query: 164 ALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVRGCSI 223
A LF+ +RN+ W ++ F + R E ++ +M E + PN + ++ CS
Sbjct: 265 ARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSS 324
Query: 224 GMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDVISWNS 283
L GK +H ++I+ G ++++ + +D Y+ CG++ A+ FD +P +VISW+S
Sbjct: 325 LGSLRHGKSVHGYMIRNG-IEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSS 383
Query: 284 IVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLG 343
+++ + L +AL+ F +M+ P+ +FV L+ S +GNV G + +T+
Sbjct: 384 MINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTR-- 441
Query: 344 FDHGSVHVQ---SALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAV 400
D+G V + + + D+ G+ I + + ++ P + + S +LL + I V
Sbjct: 442 -DYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMA---SAWGALLSACRIHKEV 497
Query: 401 EMFGFMVDEGIGLDEVTLSTTLKALSVSASANLGSCRLLHCCAIKSGFE 449
++ G + ++ + ++ S + ++ A A G +++C K G +
Sbjct: 498 DLAGEIAEKLLSMEPEKSSVYVLLSNIYADA--GMWEMVNCVRRKMGIK 544
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 266 bits (680), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 173/599 (28%), Positives = 306/599 (51%), Gaps = 47/599 (7%)
Query: 102 VSHGIKESASTFSSVLSVCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLVDLY-MRMGP 160
++ I S F S+L VC + Q+H + ++ G N L + R+G
Sbjct: 26 ITESISNDYSRFISILGVCKTTDQFK---QLHSQSITRGVAPNPTFQKKLFVFWCSRLGG 82
Query: 161 SVR-ALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGLSFCYMVR 219
V A LF ++PE ++ WN M++ + ++ E +R+Y M EGV P+ +F +++
Sbjct: 83 HVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLN 142
Query: 220 GCSI-GMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDFIPVDDV 278
G G L GK+LH HV+K G + N++V NALV YS CG + A+ FD +DV
Sbjct: 143 GLKRDGGALACGKKLHCHVVKFG-LGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 279 ISWNSIVSIYADYDLIFDALELFFRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGY 338
SWN ++S Y +++EL M+ P+ + + L+ S+ + K++H Y
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEY 261
Query: 339 VTKLGFDHGSVHVQSALTDMYGKCNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIK- 397
V++ + S+ +++AL + Y C ++ +V +F S R + S++ + GN+K
Sbjct: 262 VSECKTE-PSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKL 320
Query: 398 ------------------------------DAVEMFGFMVDEGIGLDEVTLSTTLKALSV 427
+++E+F M G+ DE T+ + L
Sbjct: 321 ARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVL----- 375
Query: 428 SASANLGSCRL---LHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIPSPNVV 484
+A A+LGS + + K+ ++++ V +L+D Y +CG E + +VF + +
Sbjct: 376 TACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKF 435
Query: 485 CFTSIMNGYSRNGMGREALDMLEVMIQRGLIPDKVTFLCVLAGCNHSGMVKEGQLVFNSM 544
+T+++ G + NG G+EA+ + M + PD +T+L VL+ CNHSGMV + + F M
Sbjct: 436 TWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKM 495
Query: 545 KSVYGIDADRQHYSCMIDMLGRAGILDKAEELLQQTPGGGDCMMWSSLLRSCRVHGNEII 604
+S + I+ HY CM+DMLGRAG++ +A E+L++ P + ++W +LL + R+H +E +
Sbjct: 496 RSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPM 555
Query: 605 GRRVANILMELEPVDFAVYSQVSNFYSEIGEFEVSMQIRETALARKLTRDIGHSLIEVN 663
A ++ELEP + AVY+ + N Y+ ++ ++R + + + G SLIEVN
Sbjct: 556 AELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVN 614
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/495 (25%), Positives = 228/495 (46%), Gaps = 47/495 (9%)
Query: 38 PNP----QLNIYSSNRTIDDFVKSGHLNSAKKLFDEMPARDMVTYNLLISGCGKFRHPKQ 93
PNP +L ++ +R GH++ A KLF ++P D+V +N +I G K +
Sbjct: 64 PNPTFQKKLFVFWCSRL------GGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGE 117
Query: 94 ALYLYDEMVSHGIKESASTFSSVLS-VCSNAGFYTEGIQIHCRVLSLGFGLNLYIGSPLV 152
+ LY M+ G+ + TF +L+ + + G G ++HC V+ G G NLY+ + LV
Sbjct: 118 GVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALV 177
Query: 153 DLYMRMGPSVRALDLFDELPERNLATWNLMLRAFCELSRPDEVLRMYNKMKAEGVEPNGL 212
+Y G A +FD + ++ +WNLM+ + + +E + + +M+ V P +
Sbjct: 178 KMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSV 237
Query: 213 SFCYMVRGCSIGMLLDEGKQLHSHVIKLGWVDVNIFVANALVDFYSACGSLIEAKKSFDF 272
+ ++ CS D K++H +V + + ++ + NALV+ Y+ACG + A + F
Sbjct: 238 TLLLVLSACSKVKDKDLCKRVHEYVSECK-TEPSLRLENALVNAYAACGEMDIAVRIFRS 296
Query: 273 IPVDDVISWNSIVSIYAD---------------------YDLIFD----------ALELF 301
+ DVISW SIV Y + + ++ D +LE+F
Sbjct: 297 MKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIF 356
Query: 302 FRMQLCRKRPSIRSFVEFLNFASRTGNVYFGKQIHGYVTKLGFDHGSVHVQSALTDMYGK 361
MQ P + V L + G++ G+ I Y+ K + V V +AL DMY K
Sbjct: 357 REMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVV-VGNALIDMYFK 415
Query: 362 CNVIESSVAVFESAPGRSLECCNSLMTSLLHSGNIKDAVEMFGFMVDEGIGLDEVTLSTT 421
C E + VF R +++ L ++G ++A+++F M D I D++T
Sbjct: 416 CGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGV 475
Query: 422 LKALSVSASANLGSCRLLHCCAIKSGFESNIAVSCSLMDAYSRCGHIELSHQVFEKIP-S 480
L A + S + + E ++ ++D R G ++ ++++ K+P +
Sbjct: 476 LSACNHSGMVDQAR-KFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMN 534
Query: 481 PNVVCFTSIMNGYSR 495
PN + + +++ G SR
Sbjct: 535 PNSIVWGALL-GASR 548
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 237,120,334
Number of Sequences: 539616
Number of extensions: 9929623
Number of successful extensions: 31210
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 401
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 21769
Number of HSP's gapped (non-prelim): 2751
length of query: 666
length of database: 191,569,459
effective HSP length: 124
effective length of query: 542
effective length of database: 124,657,075
effective search space: 67564134650
effective search space used: 67564134650
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)