Query 047768
Match_columns 1009
No_of_seqs 983 out of 6458
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 02:57:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047768.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047768hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1E-117 2E-122 1135.2 63.9 919 23-1004 26-955 (968)
2 PLN00113 leucine-rich repeat r 100.0 2.2E-62 4.9E-67 625.9 26.1 515 94-622 69-585 (968)
3 KOG1187 Serine/threonine prote 100.0 5.8E-48 1.3E-52 426.3 27.8 289 687-1002 61-354 (361)
4 KOG0192 Tyrosine kinase specif 100.0 1.4E-45 3.1E-50 403.4 23.8 260 702-1006 42-309 (362)
5 KOG0197 Tyrosine kinases [Sign 100.0 1.1E-45 2.3E-50 400.0 17.2 258 702-1004 207-465 (468)
6 KOG0581 Mitogen-activated prot 100.0 7E-45 1.5E-49 375.4 20.2 254 702-996 80-335 (364)
7 KOG1026 Nerve growth factor re 100.0 9.5E-45 2.1E-49 411.4 16.3 267 701-1005 486-767 (774)
8 KOG0595 Serine/threonine-prote 100.0 2.7E-44 5.7E-49 373.5 17.4 202 700-924 9-218 (429)
9 KOG0615 Serine/threonine prote 100.0 7.5E-44 1.6E-48 369.0 15.3 253 701-996 172-437 (475)
10 KOG0196 Tyrosine kinase, EPH ( 100.0 1.7E-44 3.6E-49 399.1 9.3 271 691-1003 610-894 (996)
11 KOG0575 Polo-like serine/threo 100.0 9.4E-43 2E-47 380.1 19.5 248 701-995 18-268 (592)
12 KOG0472 Leucine-rich repeat pr 100.0 3.6E-46 7.8E-51 383.1 -7.5 475 71-598 46-541 (565)
13 KOG0591 NIMA (never in mitosis 100.0 8.6E-44 1.9E-48 350.0 9.6 263 700-999 18-284 (375)
14 KOG0593 Predicted protein kina 100.0 1.4E-42 3E-47 345.0 15.0 271 701-995 2-283 (396)
15 KOG0193 Serine/threonine prote 100.0 3.4E-42 7.3E-47 373.0 14.2 267 694-1003 385-656 (678)
16 KOG4194 Membrane glycoprotein 100.0 1.1E-42 2.3E-47 372.6 8.1 366 96-473 80-448 (873)
17 KOG1095 Protein tyrosine kinas 100.0 4.4E-41 9.6E-46 395.8 20.3 267 702-1006 693-967 (1025)
18 KOG0472 Leucine-rich repeat pr 100.0 1.1E-44 2.4E-49 372.2 -8.9 460 70-581 68-547 (565)
19 KOG0600 Cdc2-related protein k 100.0 7.8E-41 1.7E-45 355.3 18.7 273 701-995 117-399 (560)
20 KOG4194 Membrane glycoprotein 100.0 1E-42 2.2E-47 372.7 4.3 366 171-568 81-446 (873)
21 KOG2052 Activin A type IB rece 100.0 4.5E-40 9.8E-45 344.0 22.0 272 701-1002 211-505 (513)
22 KOG0598 Ribosomal protein S6 k 100.0 1.5E-40 3.2E-45 343.4 17.3 202 700-923 24-228 (357)
23 KOG0198 MEKK and related serin 100.0 2E-40 4.4E-45 350.8 18.0 261 700-999 16-279 (313)
24 KOG3653 Transforming growth fa 100.0 2.6E-40 5.6E-45 348.5 17.9 281 701-1005 210-508 (534)
25 KOG0659 Cdk activating kinase 100.0 5.6E-40 1.2E-44 321.5 19.0 273 701-996 2-281 (318)
26 KOG0592 3-phosphoinositide-dep 100.0 1.7E-40 3.8E-45 355.5 16.8 260 697-995 69-337 (604)
27 KOG0661 MAPK related serine/th 100.0 4.2E-41 9E-46 354.7 11.4 274 700-996 9-291 (538)
28 KOG0578 p21-activated serine/t 100.0 2.2E-40 4.8E-45 358.7 17.1 249 701-996 273-523 (550)
29 KOG0582 Ste20-like serine/thre 100.0 1.7E-39 3.7E-44 339.9 21.7 266 699-995 24-292 (516)
30 KOG4721 Serine/threonine prote 100.0 2.8E-40 6E-45 352.5 12.3 241 706-1001 129-369 (904)
31 KOG0194 Protein tyrosine kinas 100.0 2.5E-39 5.4E-44 357.3 18.7 264 698-1005 154-425 (474)
32 KOG4278 Protein tyrosine kinas 100.0 1.4E-39 3E-44 349.5 13.8 263 695-1001 261-524 (1157)
33 KOG1094 Discoidin domain recep 100.0 1.9E-39 4.1E-44 347.9 13.2 264 701-1000 538-804 (807)
34 KOG0663 Protein kinase PITSLRE 100.0 7E-39 1.5E-43 323.0 16.1 272 700-995 75-360 (419)
35 KOG0201 Serine/threonine prote 100.0 1.5E-39 3.2E-44 340.7 10.2 250 701-996 13-263 (467)
36 KOG0597 Serine-threonine prote 100.0 3.8E-39 8.3E-44 344.4 13.4 199 701-922 2-202 (808)
37 cd05102 PTKc_VEGFR3 Catalytic 100.0 3.4E-38 7.5E-43 354.4 21.3 269 699-1003 5-337 (338)
38 KOG0583 Serine/threonine prote 100.0 8.3E-38 1.8E-42 346.2 23.6 251 698-994 14-273 (370)
39 KOG0588 Serine/threonine prote 100.0 2.5E-38 5.4E-43 345.6 18.3 249 700-996 11-263 (786)
40 KOG0616 cAMP-dependent protein 100.0 2.2E-38 4.8E-43 314.9 14.5 232 700-957 43-283 (355)
41 KOG4257 Focal adhesion tyrosin 100.0 3.8E-38 8.1E-43 339.5 16.9 257 702-1003 390-652 (974)
42 PHA02988 hypothetical protein; 100.0 2.2E-37 4.7E-42 337.9 22.7 252 706-1002 25-281 (283)
43 KOG0660 Mitogen-activated prot 100.0 1.1E-37 2.3E-42 320.8 17.1 275 700-995 21-309 (359)
44 KOG2345 Serine/threonine prote 100.0 1.8E-38 4E-43 307.7 10.6 279 698-1000 18-300 (302)
45 KOG0580 Serine/threonine prote 100.0 7.1E-38 1.5E-42 302.5 13.6 251 699-996 20-273 (281)
46 KOG0658 Glycogen synthase kina 100.0 3.2E-38 6.9E-43 325.2 11.8 269 702-995 25-305 (364)
47 KOG0605 NDR and related serine 100.0 1.1E-37 2.4E-42 334.8 15.8 256 698-989 138-435 (550)
48 KOG0585 Ca2+/calmodulin-depend 100.0 1.8E-37 3.9E-42 326.6 16.4 262 698-997 94-373 (576)
49 KOG0594 Protein kinase PCTAIRE 100.0 5.6E-37 1.2E-41 317.5 19.2 280 700-996 10-302 (323)
50 KOG1989 ARK protein kinase fam 100.0 2.1E-37 4.6E-42 353.9 17.6 271 701-1003 37-314 (738)
51 cd05631 STKc_GRK4 Catalytic do 100.0 1.1E-36 2.4E-41 333.3 22.2 251 703-995 2-260 (285)
52 cd05096 PTKc_DDR1 Catalytic do 100.0 1.5E-36 3.2E-41 335.9 23.1 267 701-998 5-303 (304)
53 cd06649 PKc_MEK2 Catalytic dom 100.0 2.5E-36 5.5E-41 337.6 24.2 200 700-922 4-204 (331)
54 KOG1025 Epidermal growth facto 100.0 7.6E-38 1.7E-42 347.2 11.4 256 703-1002 698-959 (1177)
55 cd05104 PTKc_Kit Catalytic dom 100.0 1.3E-36 2.7E-41 345.2 21.4 264 700-1000 34-374 (375)
56 cd07862 STKc_CDK6 Catalytic do 100.0 2E-36 4.3E-41 332.6 22.1 274 701-995 1-286 (290)
57 KOG0611 Predicted serine/threo 100.0 4.4E-37 9.5E-42 315.7 15.5 247 701-996 53-303 (668)
58 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.4E-36 3.1E-41 329.1 20.5 257 700-1000 4-265 (266)
59 KOG0033 Ca2+/calmodulin-depend 100.0 2.9E-38 6.2E-43 304.6 5.9 252 700-995 10-266 (355)
60 cd05106 PTKc_CSF-1R Catalytic 100.0 2.2E-36 4.9E-41 342.7 22.5 266 699-1001 36-373 (374)
61 KOG0618 Serine/threonine phosp 100.0 1.9E-39 4.1E-44 366.5 -2.8 480 75-596 3-487 (1081)
62 cd05108 PTKc_EGFR Catalytic do 100.0 1.6E-36 3.6E-41 337.2 20.7 260 701-1004 7-272 (316)
63 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.3E-36 4.9E-41 334.1 20.9 274 700-995 4-287 (303)
64 cd05612 STKc_PRKX_like Catalyt 100.0 9E-37 2E-41 334.9 17.3 246 701-996 1-254 (291)
65 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.8E-36 6E-41 339.4 21.6 274 702-996 1-290 (338)
66 cd05571 STKc_PKB Catalytic dom 100.0 1.4E-36 2.9E-41 338.6 18.8 242 707-995 1-250 (323)
67 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.3E-36 5.1E-41 331.3 20.2 271 700-995 4-284 (288)
68 cd07848 STKc_CDKL5 Catalytic d 100.0 2.9E-36 6.3E-41 330.8 20.8 273 701-995 1-283 (287)
69 KOG0694 Serine/threonine prote 100.0 6.2E-37 1.3E-41 338.2 15.1 244 699-990 366-613 (694)
70 cd06650 PKc_MEK1 Catalytic dom 100.0 2.7E-36 5.9E-41 337.2 20.6 200 700-922 4-204 (333)
71 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.4E-36 3.1E-41 340.3 18.1 254 701-996 1-257 (333)
72 PF07714 Pkinase_Tyr: Protein 100.0 1.2E-36 2.7E-41 327.8 16.5 251 705-997 3-259 (259)
73 cd05111 PTK_HER3 Pseudokinase 100.0 6.9E-36 1.5E-40 326.0 22.6 259 701-1003 7-271 (279)
74 PTZ00263 protein kinase A cata 100.0 1.7E-36 3.7E-41 338.5 17.9 246 700-995 17-270 (329)
75 cd05052 PTKc_Abl Catalytic dom 100.0 6.7E-36 1.4E-40 323.3 21.6 256 701-1000 6-262 (263)
76 KOG0444 Cytoskeletal regulator 100.0 1.2E-38 2.7E-43 342.7 -0.1 342 70-477 7-352 (1255)
77 KOG0574 STE20-like serine/thre 100.0 6.6E-38 1.4E-42 310.0 5.0 250 702-996 34-283 (502)
78 cd05048 PTKc_Ror Catalytic Dom 100.0 7.2E-36 1.6E-40 327.0 21.5 261 701-999 5-282 (283)
79 cd05585 STKc_YPK1_like Catalyt 100.0 3.5E-36 7.6E-41 333.7 18.7 238 709-993 1-241 (312)
80 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 9.1E-36 2E-40 326.1 21.2 271 703-1001 6-282 (283)
81 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.8E-35 3.9E-40 318.6 23.1 251 701-997 4-255 (256)
82 cd05595 STKc_PKB_beta Catalyti 100.0 5.6E-36 1.2E-40 333.4 19.7 242 707-995 1-250 (323)
83 KOG0618 Serine/threonine phosp 100.0 8.8E-39 1.9E-43 361.2 -3.2 485 98-621 2-489 (1081)
84 PTZ00426 cAMP-dependent protei 100.0 4.2E-36 9.1E-41 335.8 18.4 247 700-996 29-284 (340)
85 KOG0599 Phosphorylase kinase g 100.0 1.7E-36 3.6E-41 296.7 12.7 253 700-996 16-283 (411)
86 KOG0589 Serine/threonine prote 100.0 3E-36 6.5E-41 326.2 16.0 254 700-996 3-258 (426)
87 cd05593 STKc_PKB_gamma Catalyt 100.0 9.2E-36 2E-40 332.2 20.6 243 707-996 1-251 (328)
88 cd05054 PTKc_VEGFR Catalytic d 100.0 8.7E-36 1.9E-40 333.3 20.4 267 700-1002 6-335 (337)
89 PHA03212 serine/threonine kina 100.0 1.2E-35 2.6E-40 337.6 21.6 266 700-995 91-375 (391)
90 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 8.8E-36 1.9E-40 326.4 19.5 272 701-1001 4-284 (284)
91 cd05035 PTKc_Axl_like Catalyti 100.0 5E-35 1.1E-39 318.5 25.4 265 703-1000 1-272 (273)
92 PLN00034 mitogen-activated pro 100.0 1.2E-35 2.6E-40 335.3 21.1 249 701-996 74-328 (353)
93 KOG4279 Serine/threonine prote 100.0 1.2E-36 2.7E-41 330.9 12.4 247 708-995 582-831 (1226)
94 cd05109 PTKc_HER2 Catalytic do 100.0 1.6E-35 3.5E-40 323.4 21.3 261 700-1004 6-272 (279)
95 cd08228 STKc_Nek6 Catalytic do 100.0 2.7E-35 5.8E-40 319.5 22.7 262 701-1001 2-266 (267)
96 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.3E-35 2.7E-40 337.4 20.9 266 699-1001 35-398 (400)
97 cd05033 PTKc_EphR Catalytic do 100.0 2.6E-35 5.6E-40 319.4 22.4 258 700-1000 3-265 (266)
98 KOG0199 ACK and related non-re 100.0 1.9E-36 4.2E-41 330.5 13.5 253 704-998 113-370 (1039)
99 cd07863 STKc_CDK4 Catalytic do 100.0 2E-35 4.2E-40 324.4 21.6 273 702-995 1-284 (288)
100 cd05093 PTKc_TrkB Catalytic do 100.0 3.8E-35 8.2E-40 321.9 23.8 265 701-1003 5-282 (288)
101 PTZ00267 NIMA-related protein 100.0 1.6E-35 3.4E-40 346.3 22.0 254 702-995 68-322 (478)
102 cd05075 PTKc_Axl Catalytic dom 100.0 4E-35 8.8E-40 319.1 23.6 265 703-1000 1-271 (272)
103 cd05148 PTKc_Srm_Brk Catalytic 100.0 9.2E-36 2E-40 322.0 17.9 256 699-999 4-260 (261)
104 cd05094 PTKc_TrkC Catalytic do 100.0 4.7E-35 1E-39 321.7 23.8 267 701-1005 5-287 (291)
105 cd05049 PTKc_Trk Catalytic dom 100.0 3E-35 6.6E-40 321.5 22.1 261 700-998 4-279 (280)
106 PTZ00283 serine/threonine prot 100.0 1.9E-35 4.2E-40 345.2 21.7 263 699-996 30-297 (496)
107 cd06646 STKc_MAP4K5 Catalytic 100.0 1.6E-35 3.4E-40 321.3 19.5 256 700-997 8-266 (267)
108 cd05628 STKc_NDR1 Catalytic do 100.0 2.8E-35 6E-40 333.5 22.3 208 701-922 1-238 (363)
109 cd05626 STKc_LATS2 Catalytic d 100.0 3.8E-35 8.3E-40 334.5 23.5 207 702-922 2-250 (381)
110 cd05062 PTKc_IGF-1R Catalytic 100.0 2.5E-35 5.3E-40 321.6 20.9 262 699-998 4-276 (277)
111 cd05599 STKc_NDR_like Catalyti 100.0 1.9E-35 4E-40 335.8 20.4 259 701-995 1-295 (364)
112 cd05618 STKc_aPKC_iota Catalyt 100.0 2.8E-35 6.1E-40 328.5 21.1 243 707-990 1-250 (329)
113 cd05115 PTKc_Zap-70 Catalytic 100.0 4.8E-35 1E-39 315.2 21.8 250 708-1000 2-255 (257)
114 cd05596 STKc_ROCK Catalytic do 100.0 2.1E-35 4.6E-40 334.5 19.9 255 699-996 41-304 (370)
115 cd05084 PTKc_Fes Catalytic dom 100.0 3.8E-35 8.2E-40 315.4 20.9 249 707-998 1-251 (252)
116 cd05072 PTKc_Lyn Catalytic dom 100.0 3.5E-35 7.6E-40 317.4 20.5 255 700-999 5-260 (261)
117 cd05592 STKc_nPKC_theta_delta 100.0 3.2E-35 7E-40 326.2 20.7 241 707-994 1-246 (316)
118 cd05589 STKc_PKN Catalytic dom 100.0 2.6E-35 5.6E-40 328.6 20.0 240 703-990 1-246 (324)
119 cd05588 STKc_aPKC Catalytic do 100.0 3.8E-35 8.3E-40 327.6 21.3 243 707-990 1-250 (329)
120 cd05605 STKc_GRK4_like Catalyt 100.0 4.8E-35 1E-39 320.4 21.7 253 702-996 1-261 (285)
121 cd05594 STKc_PKB_alpha Catalyt 100.0 1.3E-35 2.9E-40 331.1 17.3 243 707-996 1-252 (325)
122 cd05113 PTKc_Btk_Bmx Catalytic 100.0 3.3E-35 7.2E-40 316.4 19.8 252 701-998 4-256 (256)
123 cd05068 PTKc_Frk_like Catalyti 100.0 6.8E-35 1.5E-39 315.1 22.1 255 700-999 5-260 (261)
124 cd05063 PTKc_EphR_A2 Catalytic 100.0 5.2E-35 1.1E-39 317.4 21.0 259 700-1000 4-267 (268)
125 cd05590 STKc_nPKC_eta Catalyti 100.0 3.2E-35 6.9E-40 326.9 19.6 238 707-991 1-242 (320)
126 KOG0444 Cytoskeletal regulator 100.0 8.9E-38 1.9E-42 336.1 -0.9 362 170-597 9-374 (1255)
127 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.4E-35 3E-40 335.2 16.8 260 701-996 1-285 (350)
128 PTZ00036 glycogen synthase kin 100.0 2.8E-35 6E-40 340.1 19.6 277 700-996 65-351 (440)
129 cd05089 PTKc_Tie1 Catalytic do 100.0 6.3E-35 1.4E-39 321.6 21.5 264 701-1005 2-280 (297)
130 cd05584 STKc_p70S6K Catalytic 100.0 4.8E-35 1E-39 326.1 20.7 242 707-995 2-255 (323)
131 cd07876 STKc_JNK2 Catalytic do 100.0 4.1E-35 8.9E-40 332.0 20.5 204 699-923 19-225 (359)
132 cd05591 STKc_nPKC_epsilon Cata 100.0 3.8E-35 8.3E-40 326.8 19.8 242 707-995 1-253 (321)
133 cd05607 STKc_GRK7 Catalytic do 100.0 8.3E-35 1.8E-39 317.0 21.9 248 709-997 1-251 (277)
134 cd05621 STKc_ROCK2 Catalytic d 100.0 4.6E-35 1E-39 331.1 20.6 203 698-922 40-249 (370)
135 cd05587 STKc_cPKC Catalytic do 100.0 3.9E-35 8.5E-40 327.1 19.7 242 702-990 1-246 (324)
136 cd05071 PTKc_Src Catalytic dom 100.0 1.1E-34 2.3E-39 313.6 22.4 255 700-1000 5-260 (262)
137 cd05090 PTKc_Ror1 Catalytic do 100.0 5.4E-35 1.2E-39 319.9 20.3 261 701-999 5-282 (283)
138 PRK13184 pknD serine/threonine 100.0 6.3E-35 1.4E-39 347.4 22.3 272 701-1002 2-292 (932)
139 cd05059 PTKc_Tec_like Catalyti 100.0 7.3E-35 1.6E-39 313.8 20.9 251 701-997 4-255 (256)
140 cd05608 STKc_GRK1 Catalytic do 100.0 1E-34 2.3E-39 316.8 22.2 248 709-995 1-256 (280)
141 cd08529 STKc_FA2-like Catalyti 100.0 1.6E-34 3.4E-39 311.4 23.2 251 702-996 1-253 (256)
142 cd05060 PTKc_Syk_like Catalyti 100.0 8.7E-35 1.9E-39 313.5 21.2 251 707-1001 1-256 (257)
143 cd06654 STKc_PAK1 Catalytic do 100.0 9.8E-35 2.1E-39 319.6 22.0 252 700-996 19-270 (296)
144 cd05045 PTKc_RET Catalytic dom 100.0 8.9E-35 1.9E-39 319.4 21.6 263 702-1002 1-288 (290)
145 cd05116 PTKc_Syk Catalytic dom 100.0 8.9E-35 1.9E-39 313.4 21.1 249 708-1000 2-255 (257)
146 cd05053 PTKc_FGFR Catalytic do 100.0 5.8E-35 1.3E-39 321.5 19.9 265 699-1001 10-292 (293)
147 cd05619 STKc_nPKC_theta Cataly 100.0 6.4E-35 1.4E-39 323.6 20.3 241 707-994 1-246 (316)
148 cd05107 PTKc_PDGFR_beta Cataly 100.0 9.5E-35 2.1E-39 330.0 21.8 268 697-1001 33-400 (401)
149 cd06645 STKc_MAP4K3 Catalytic 100.0 6.8E-35 1.5E-39 316.3 19.7 253 701-995 9-264 (267)
150 cd08229 STKc_Nek7 Catalytic do 100.0 1.2E-34 2.7E-39 314.3 21.7 262 701-1001 2-266 (267)
151 cd05601 STKc_CRIK Catalytic do 100.0 3.1E-35 6.7E-40 329.2 17.5 253 701-995 1-262 (330)
152 cd05620 STKc_nPKC_delta Cataly 100.0 6.9E-35 1.5E-39 323.6 20.1 241 707-994 1-246 (316)
153 cd05629 STKc_NDR_like_fungal C 100.0 6.4E-35 1.4E-39 332.6 20.3 208 701-922 1-250 (377)
154 cd07875 STKc_JNK1 Catalytic do 100.0 5.9E-35 1.3E-39 331.4 20.0 276 699-996 22-318 (364)
155 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.3E-34 2.8E-39 321.1 22.1 272 701-995 6-285 (309)
156 cd05598 STKc_LATS Catalytic do 100.0 5.1E-35 1.1E-39 333.4 19.4 209 701-923 1-247 (376)
157 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.5E-34 5.4E-39 312.0 23.9 262 701-1001 2-266 (267)
158 cd06637 STKc_TNIK Catalytic do 100.0 9.4E-35 2E-39 316.2 20.6 258 699-995 4-268 (272)
159 cd05088 PTKc_Tie2 Catalytic do 100.0 1E-34 2.2E-39 320.7 21.0 263 700-1003 6-283 (303)
160 cd05091 PTKc_Ror2 Catalytic do 100.0 1.1E-34 2.5E-39 317.4 21.3 261 701-999 5-282 (283)
161 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.5E-34 3.3E-39 312.2 21.9 254 700-999 5-259 (260)
162 cd05036 PTKc_ALK_LTK Catalytic 100.0 9.3E-35 2E-39 316.9 20.4 261 700-998 5-276 (277)
163 KOG0584 Serine/threonine prote 100.0 9.3E-36 2E-40 325.8 12.3 248 704-995 43-295 (632)
164 cd05616 STKc_cPKC_beta Catalyt 100.0 6.6E-35 1.4E-39 325.2 19.3 242 702-990 1-246 (323)
165 cd05065 PTKc_EphR_B Catalytic 100.0 1.1E-34 2.3E-39 315.1 20.5 260 701-1000 4-268 (269)
166 cd05570 STKc_PKC Catalytic dom 100.0 7.6E-35 1.6E-39 323.7 19.8 242 707-995 1-251 (318)
167 KOG0032 Ca2+/calmodulin-depend 100.0 1.4E-34 3.1E-39 319.8 21.6 252 700-996 34-293 (382)
168 cd07874 STKc_JNK3 Catalytic do 100.0 6.3E-35 1.4E-39 330.1 19.3 277 698-996 14-311 (355)
169 KOG0667 Dual-specificity tyros 100.0 4.6E-35 9.9E-40 324.2 17.3 196 702-922 187-390 (586)
170 cd05614 STKc_MSK2_N N-terminal 100.0 9.7E-35 2.1E-39 325.4 20.2 252 702-995 1-266 (332)
171 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.4E-34 5.1E-39 318.2 23.0 266 699-1002 13-298 (304)
172 KOG0577 Serine/threonine prote 100.0 8.5E-36 1.8E-40 319.5 10.9 245 703-996 28-278 (948)
173 cd06615 PKc_MEK Catalytic doma 100.0 1.5E-34 3.3E-39 320.1 21.4 272 701-997 1-288 (308)
174 cd05082 PTKc_Csk Catalytic dom 100.0 2.6E-34 5.5E-39 309.7 22.4 251 700-1000 5-256 (256)
175 cd06624 STKc_ASK Catalytic dom 100.0 2.3E-34 5E-39 312.3 22.1 257 698-995 5-264 (268)
176 cd05625 STKc_LATS1 Catalytic d 100.0 1.7E-34 3.7E-39 329.7 22.1 207 702-922 2-250 (382)
177 cd05575 STKc_SGK Catalytic dom 100.0 6.3E-35 1.4E-39 325.3 18.1 238 707-991 1-242 (323)
178 cd05110 PTKc_HER4 Catalytic do 100.0 1.4E-34 3E-39 319.7 20.6 261 700-1004 6-272 (303)
179 cd05097 PTKc_DDR_like Catalyti 100.0 2.5E-34 5.5E-39 316.5 22.6 268 700-998 4-294 (295)
180 cd05051 PTKc_DDR Catalytic dom 100.0 9.8E-35 2.1E-39 320.3 19.4 268 700-998 4-295 (296)
181 cd05066 PTKc_EphR_A Catalytic 100.0 1.8E-34 3.8E-39 313.0 21.0 258 701-1000 4-266 (267)
182 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.8E-34 3.9E-39 324.2 21.7 268 700-1003 6-342 (343)
183 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.8E-34 6.1E-39 318.0 22.9 270 700-1007 17-306 (307)
184 cd05043 PTK_Ryk Pseudokinase d 100.0 1.7E-34 3.6E-39 315.6 20.7 268 699-1003 4-279 (280)
185 cd05622 STKc_ROCK1 Catalytic d 100.0 1.5E-34 3.3E-39 327.3 21.0 208 693-922 35-249 (371)
186 cd06619 PKc_MKK5 Catalytic dom 100.0 2.3E-34 4.9E-39 314.2 21.6 250 701-996 1-253 (279)
187 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 3E-34 6.5E-39 314.2 22.6 270 701-1000 4-283 (284)
188 cd07853 STKc_NLK Catalytic dom 100.0 1.4E-34 3E-39 329.1 20.6 275 702-996 1-288 (372)
189 cd05058 PTKc_Met_Ron Catalytic 100.0 4.3E-34 9.3E-39 309.1 23.4 256 707-1002 1-261 (262)
190 cd05095 PTKc_DDR2 Catalytic do 100.0 1.2E-34 2.5E-39 319.4 19.2 267 701-998 5-295 (296)
191 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.8E-34 3.9E-39 321.9 20.9 244 707-991 1-249 (327)
192 cd05055 PTKc_PDGFR Catalytic d 100.0 2.3E-34 5E-39 317.5 21.4 260 700-1000 34-301 (302)
193 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.9E-34 6.2E-39 314.5 22.0 275 701-1001 4-284 (284)
194 cd05092 PTKc_TrkA Catalytic do 100.0 3.1E-34 6.8E-39 313.2 22.2 260 701-998 5-279 (280)
195 cd08219 STKc_Nek3 Catalytic do 100.0 2.7E-34 5.8E-39 309.3 21.3 251 702-996 1-252 (255)
196 cd05032 PTKc_InsR_like Catalyt 100.0 2.7E-34 5.8E-39 313.5 21.4 261 700-998 5-276 (277)
197 cd05602 STKc_SGK1 Catalytic do 100.0 8.8E-35 1.9E-39 324.4 17.9 242 707-995 1-246 (325)
198 cd05061 PTKc_InsR Catalytic do 100.0 3E-34 6.5E-39 314.8 21.8 264 699-1000 4-278 (288)
199 cd06638 STKc_myosinIIIA Cataly 100.0 1.9E-34 4.1E-39 316.3 20.1 268 693-996 10-283 (286)
200 cd05604 STKc_SGK3 Catalytic do 100.0 7E-35 1.5E-39 325.2 17.0 242 707-995 1-246 (325)
201 cd05597 STKc_DMPK_like Catalyt 100.0 4.5E-34 9.6E-39 319.3 23.2 202 701-922 1-210 (331)
202 PTZ00284 protein kinase; Provi 100.0 1.5E-34 3.3E-39 338.2 20.3 274 695-995 123-437 (467)
203 cd05056 PTKc_FAK Catalytic dom 100.0 4.8E-34 1E-38 310.2 22.8 258 701-1003 6-268 (270)
204 cd05582 STKc_RSK_N N-terminal 100.0 4.4E-35 9.6E-40 325.9 15.0 239 707-992 2-245 (318)
205 cd07868 STKc_CDK8 Catalytic do 100.0 4.4E-34 9.6E-39 318.2 22.9 204 706-923 6-219 (317)
206 cd05099 PTKc_FGFR4 Catalytic d 100.0 6.8E-34 1.5E-38 315.9 24.3 268 700-1005 11-298 (314)
207 cd06643 STKc_SLK Catalytic dom 100.0 2.6E-34 5.7E-39 314.3 20.7 252 702-996 6-262 (282)
208 cd06625 STKc_MEKK3_like Cataly 100.0 5E-34 1.1E-38 308.8 22.6 254 701-996 2-260 (263)
209 cd06656 STKc_PAK3 Catalytic do 100.0 2.7E-34 5.8E-39 316.4 20.8 251 700-995 18-268 (297)
210 cd05067 PTKc_Lck_Blk Catalytic 100.0 3.7E-34 8E-39 309.2 21.5 254 700-999 5-259 (260)
211 cd05057 PTKc_EGFR_like Catalyt 100.0 4.3E-34 9.4E-39 312.1 22.0 259 701-1003 7-271 (279)
212 KOG0610 Putative serine/threon 100.0 2.4E-34 5.2E-39 299.2 18.6 260 700-994 76-390 (459)
213 cd05632 STKc_GRK5 Catalytic do 100.0 4.5E-34 9.8E-39 312.6 22.0 252 703-996 2-261 (285)
214 cd05050 PTKc_Musk Catalytic do 100.0 4.3E-34 9.4E-39 313.7 21.9 261 700-998 4-287 (288)
215 cd05630 STKc_GRK6 Catalytic do 100.0 4.4E-34 9.6E-39 312.6 21.9 251 703-995 2-260 (285)
216 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.9E-34 8.4E-39 322.1 22.0 273 698-996 12-298 (343)
217 cd05039 PTKc_Csk_like Catalyti 100.0 3.7E-34 7.9E-39 308.5 20.9 250 700-999 5-255 (256)
218 cd05615 STKc_cPKC_alpha Cataly 100.0 2.3E-34 5.1E-39 320.4 19.9 243 702-991 1-247 (323)
219 cd05047 PTKc_Tie Catalytic dom 100.0 6.6E-34 1.4E-38 309.0 22.9 254 707-1001 1-269 (270)
220 cd06613 STKc_MAP4K3_like Catal 100.0 5E-34 1.1E-38 308.6 21.8 254 701-995 3-259 (262)
221 cd08227 PK_STRAD_alpha Pseudok 100.0 5E-34 1.1E-38 318.8 22.4 273 705-995 2-306 (327)
222 PHA03211 serine/threonine kina 100.0 2.8E-34 6E-39 329.7 20.8 196 700-921 168-363 (461)
223 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 3.3E-34 7.1E-39 313.8 20.5 263 700-997 4-267 (284)
224 cd07873 STKc_PCTAIRE1 Catalyti 100.0 3.9E-34 8.4E-39 316.1 21.2 272 700-995 5-285 (301)
225 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 3.9E-34 8.4E-39 309.0 20.7 240 707-997 1-261 (262)
226 cd05100 PTKc_FGFR3 Catalytic d 100.0 7.2E-34 1.6E-38 318.6 23.4 267 700-1004 11-297 (334)
227 cd05627 STKc_NDR2 Catalytic do 100.0 2.1E-34 4.6E-39 326.1 19.3 208 701-922 1-238 (360)
228 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.3E-33 2.8E-38 306.5 24.5 257 707-998 1-268 (269)
229 KOG4717 Serine/threonine prote 100.0 1.7E-34 3.7E-39 304.8 16.8 248 701-995 18-269 (864)
230 cd06655 STKc_PAK2 Catalytic do 100.0 5.5E-34 1.2E-38 313.6 21.6 250 701-995 19-268 (296)
231 cd06628 STKc_MAPKKK_Byr2_like 100.0 7.9E-34 1.7E-38 308.0 22.5 254 702-995 1-263 (267)
232 cd05069 PTKc_Yes Catalytic dom 100.0 7.3E-34 1.6E-38 306.8 21.9 253 701-999 6-259 (260)
233 cd06612 STKc_MST1_2 Catalytic 100.0 5.2E-34 1.1E-38 307.3 20.6 250 701-995 3-252 (256)
234 cd05603 STKc_SGK2 Catalytic do 100.0 1.9E-34 4.2E-39 321.2 17.5 238 707-991 1-242 (321)
235 PHA03209 serine/threonine kina 100.0 5E-34 1.1E-38 322.0 21.0 194 698-920 63-256 (357)
236 cd06644 STKc_STK10_LOK Catalyt 100.0 1.7E-33 3.6E-38 309.6 24.6 252 701-995 12-268 (292)
237 cd06609 STKc_MST3_like Catalyt 100.0 7.7E-34 1.7E-38 309.3 21.6 249 701-995 1-250 (274)
238 PF00069 Pkinase: Protein kina 100.0 4E-34 8.8E-39 308.9 19.2 253 703-995 1-256 (260)
239 PTZ00266 NIMA-related protein 100.0 2.1E-34 4.6E-39 344.1 18.4 261 697-995 9-294 (1021)
240 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 4.5E-34 9.7E-39 310.6 19.3 239 708-997 2-273 (274)
241 cd05624 STKc_MRCK_beta Catalyt 100.0 6.7E-34 1.4E-38 317.9 21.2 202 701-922 1-210 (331)
242 cd06611 STKc_SLK_like Catalyti 100.0 1.1E-33 2.3E-38 309.2 22.2 254 700-996 4-262 (280)
243 cd05623 STKc_MRCK_alpha Cataly 100.0 9.4E-34 2E-38 317.0 22.2 202 701-922 1-210 (332)
244 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.5E-34 3.2E-39 311.8 15.1 241 707-998 1-258 (258)
245 cd07839 STKc_CDK5 Catalytic do 100.0 3.3E-34 7.2E-39 314.0 18.2 271 702-995 1-280 (284)
246 cd08223 STKc_Nek4 Catalytic do 100.0 1.7E-33 3.7E-38 303.5 23.4 251 702-995 1-253 (257)
247 cd06642 STKc_STK25-YSK1 Cataly 100.0 4.1E-34 8.8E-39 311.9 18.6 248 702-996 5-253 (277)
248 cd00192 PTKc Catalytic domain 100.0 1.9E-33 4.1E-38 304.0 23.3 254 707-998 1-262 (262)
249 cd05112 PTKc_Itk Catalytic dom 100.0 9.5E-34 2.1E-38 305.3 20.9 251 701-997 4-255 (256)
250 cd08221 STKc_Nek9 Catalytic do 100.0 2.1E-33 4.5E-38 302.6 23.4 251 702-996 1-253 (256)
251 cd05085 PTKc_Fer Catalytic dom 100.0 2.1E-33 4.5E-38 301.5 23.3 247 707-998 1-249 (250)
252 KOG4645 MAPKKK (MAP kinase kin 100.0 1.3E-35 2.8E-40 346.1 6.4 255 701-996 1235-1494(1509)
253 cd06640 STKc_MST4 Catalytic do 100.0 1.8E-33 4E-38 306.7 23.0 249 701-996 4-253 (277)
254 cd06639 STKc_myosinIIIB Cataly 100.0 6.7E-34 1.5E-38 312.7 19.5 269 691-995 12-286 (291)
255 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.4E-33 5.1E-38 305.4 23.5 265 703-1000 1-272 (273)
256 cd06651 STKc_MEKK3 Catalytic d 100.0 1.9E-33 4.2E-38 304.7 22.7 254 701-995 2-260 (266)
257 cd07861 STKc_CDK1_euk Catalyti 100.0 1.8E-33 3.8E-38 308.4 22.4 266 702-995 1-281 (285)
258 cd07867 STKc_CDC2L6 Catalytic 100.0 2.1E-33 4.5E-38 312.9 23.0 203 706-922 6-218 (317)
259 cd05034 PTKc_Src_like Catalyti 100.0 1.4E-33 3E-38 304.9 20.9 255 700-999 5-260 (261)
260 cd05041 PTKc_Fes_like Catalyti 100.0 1.6E-33 3.5E-38 302.5 21.2 248 707-998 1-250 (251)
261 cd05042 PTKc_Aatyk Catalytic d 100.0 3E-33 6.5E-38 303.7 23.6 257 707-998 1-268 (269)
262 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 3.7E-33 8.1E-38 305.9 24.5 264 701-995 1-265 (287)
263 PHA03207 serine/threonine kina 100.0 1E-33 2.3E-38 323.5 20.8 268 700-996 91-375 (392)
264 cd05044 PTKc_c-ros Catalytic d 100.0 1.1E-33 2.4E-38 307.2 19.8 254 707-998 1-268 (269)
265 cd05083 PTKc_Chk Catalytic dom 100.0 1.1E-33 2.4E-38 304.3 19.7 247 701-999 6-253 (254)
266 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.1E-33 2.5E-38 309.4 20.0 265 692-995 7-278 (282)
267 cd07847 STKc_CDKL1_4 Catalytic 100.0 3.5E-33 7.7E-38 306.2 23.7 270 701-995 1-282 (286)
268 cd05086 PTKc_Aatyk2 Catalytic 100.0 5.6E-33 1.2E-37 301.2 25.0 255 707-997 1-266 (268)
269 KOG1024 Receptor-like protein 100.0 3.6E-34 7.8E-39 293.7 14.3 273 694-1003 277-558 (563)
270 cd07844 STKc_PCTAIRE_like Cata 100.0 2E-33 4.4E-38 308.9 21.4 274 700-995 4-287 (291)
271 KOG4250 TANK binding protein k 100.0 3.8E-34 8.1E-39 317.0 15.5 285 702-1002 14-312 (732)
272 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2E-33 4.4E-38 308.0 21.4 255 701-996 1-262 (286)
273 cd06631 STKc_YSK4 Catalytic do 100.0 3.1E-33 6.7E-38 303.0 22.5 255 702-995 1-261 (265)
274 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.9E-33 4.1E-38 303.5 20.7 238 707-997 1-258 (259)
275 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2.2E-33 4.8E-38 308.5 21.4 274 699-995 3-287 (291)
276 cd05040 PTKc_Ack_like Catalyti 100.0 4.2E-33 9.1E-38 300.4 23.0 251 707-998 1-256 (257)
277 cd08218 STKc_Nek1 Catalytic do 100.0 3.1E-33 6.8E-38 301.2 22.0 251 702-996 1-253 (256)
278 KOG0579 Ste20-like serine/thre 100.0 4.2E-35 9.2E-40 315.7 7.1 251 701-995 32-288 (1187)
279 cd07849 STKc_ERK1_2_like Catal 100.0 9.5E-34 2.1E-38 317.9 18.5 279 700-996 4-292 (336)
280 cd06605 PKc_MAPKK Catalytic do 100.0 1.8E-33 4E-38 304.7 20.0 255 701-996 1-257 (265)
281 cd05586 STKc_Sck1_like Catalyt 100.0 5.4E-34 1.2E-38 319.0 16.0 236 709-990 1-243 (330)
282 cd08220 STKc_Nek8 Catalytic do 100.0 4.7E-33 1E-37 299.9 22.6 249 702-995 1-252 (256)
283 KOG1035 eIF-2alpha kinase GCN2 100.0 2.5E-34 5.4E-39 334.0 13.4 267 698-995 476-870 (1351)
284 cd06658 STKc_PAK5 Catalytic do 100.0 1.3E-33 2.9E-38 309.8 18.6 250 702-996 23-272 (292)
285 cd06632 STKc_MEKK1_plant Catal 100.0 4.5E-33 9.7E-38 300.4 22.3 248 702-995 1-254 (258)
286 cd06647 STKc_PAK_I Catalytic d 100.0 2.4E-33 5.3E-38 308.0 20.5 252 700-996 18-269 (293)
287 KOG0200 Fibroblast/platelet-de 100.0 1.4E-33 3.1E-38 335.1 20.0 266 701-1002 296-581 (609)
288 cd06652 STKc_MEKK2 Catalytic d 100.0 4.5E-33 9.7E-38 301.7 22.2 254 701-995 2-260 (265)
289 KOG0596 Dual specificity; seri 100.0 3.4E-34 7.5E-39 306.9 13.1 254 699-995 359-626 (677)
290 cd05073 PTKc_Hck Catalytic dom 100.0 4E-33 8.7E-38 301.1 21.6 254 700-999 5-259 (260)
291 cd06629 STKc_MAPKKK_Bck1_like 100.0 7.3E-33 1.6E-37 301.3 23.6 255 702-995 2-268 (272)
292 cd05046 PTK_CCK4 Pseudokinase 100.0 2.3E-33 5E-38 305.7 19.7 260 701-998 5-274 (275)
293 cd07832 STKc_CCRK Catalytic do 100.0 3.2E-33 6.9E-38 306.6 20.9 273 702-996 1-282 (286)
294 cd06659 STKc_PAK6 Catalytic do 100.0 4.5E-33 9.8E-38 306.4 21.8 249 703-996 23-271 (297)
295 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.7E-33 3.6E-38 308.8 18.3 271 701-995 1-282 (286)
296 cd08217 STKc_Nek2 Catalytic do 100.0 6.7E-33 1.5E-37 300.2 22.7 255 702-996 1-262 (265)
297 cd05574 STKc_phototropin_like 100.0 4.1E-33 8.8E-38 310.3 21.4 260 701-995 1-288 (316)
298 cd06608 STKc_myosinIII_like Ca 100.0 3.3E-33 7.2E-38 304.5 20.0 261 699-995 4-271 (275)
299 cd06617 PKc_MKK3_6 Catalytic d 100.0 4.8E-33 1E-37 304.6 20.9 254 701-995 1-260 (283)
300 cd08528 STKc_Nek10 Catalytic d 100.0 5.4E-33 1.2E-37 301.8 20.6 256 702-998 1-268 (269)
301 cd05609 STKc_MAST Catalytic do 100.0 1.3E-32 2.8E-37 304.4 24.0 263 701-999 1-273 (305)
302 cd06626 STKc_MEKK4 Catalytic d 100.0 1E-32 2.2E-37 298.7 22.7 255 702-995 1-260 (264)
303 cd07850 STKc_JNK Catalytic dom 100.0 5.4E-33 1.2E-37 313.9 21.2 276 699-996 14-311 (353)
304 cd06623 PKc_MAPKK_plant_like C 100.0 1.2E-32 2.7E-37 298.1 23.1 253 701-996 1-256 (264)
305 PHA02882 putative serine/threo 100.0 7.5E-33 1.6E-37 304.2 21.7 269 700-997 11-293 (294)
306 KOG0604 MAP kinase-activated p 100.0 9.3E-34 2E-38 281.6 12.9 258 700-996 60-322 (400)
307 smart00219 TyrKc Tyrosine kina 100.0 1.3E-32 2.7E-37 296.8 23.0 252 703-997 1-258 (258)
308 cd07841 STKc_CDK7 Catalytic do 100.0 9.6E-33 2.1E-37 304.7 22.4 269 702-995 1-281 (298)
309 cd06630 STKc_MEKK1 Catalytic d 100.0 1.2E-32 2.7E-37 298.8 22.6 256 702-995 1-263 (268)
310 cd06917 STKc_NAK1_like Catalyt 100.0 1E-32 2.2E-37 301.1 22.0 249 702-996 2-255 (277)
311 cd06607 STKc_TAO Catalytic dom 100.0 1.6E-32 3.5E-37 304.0 23.5 247 701-996 15-267 (307)
312 KOG0607 MAP kinase-interacting 100.0 1.5E-33 3.3E-38 282.0 13.6 215 692-926 74-297 (463)
313 cd06648 STKc_PAK_II Catalytic 100.0 2.3E-32 5E-37 299.1 24.0 249 702-995 20-268 (285)
314 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.3E-32 2.8E-37 298.4 21.9 261 701-995 1-263 (267)
315 cd07860 STKc_CDK2_3 Catalytic 100.0 5E-33 1.1E-37 304.7 18.6 272 702-995 1-280 (284)
316 cd06641 STKc_MST3 Catalytic do 100.0 1.2E-32 2.7E-37 300.2 21.6 248 702-996 5-253 (277)
317 cd08225 STKc_Nek5 Catalytic do 100.0 1.2E-32 2.6E-37 296.9 20.6 250 702-995 1-253 (257)
318 cd07833 STKc_CDKL Catalytic do 100.0 1E-32 2.3E-37 302.8 20.3 273 701-995 1-284 (288)
319 cd07865 STKc_CDK9 Catalytic do 100.0 2.3E-32 4.9E-37 303.6 22.8 281 700-995 11-306 (310)
320 cd05580 STKc_PKA Catalytic dom 100.0 1.7E-32 3.7E-37 301.1 21.6 245 701-995 1-253 (290)
321 cd07837 STKc_CdkB_plant Cataly 100.0 1.4E-32 2.9E-37 303.0 20.8 281 701-995 1-290 (295)
322 cd07845 STKc_CDK10 Catalytic d 100.0 1.6E-32 3.4E-37 304.5 21.2 274 700-995 6-289 (309)
323 cd07843 STKc_CDC2L1 Catalytic 100.0 1.9E-32 4E-37 301.5 21.5 273 701-995 5-289 (293)
324 cd05578 STKc_Yank1 Catalytic d 100.0 1.1E-32 2.4E-37 297.4 19.0 248 702-994 1-253 (258)
325 cd06614 STKc_PAK Catalytic dom 100.0 2.5E-32 5.4E-37 299.4 22.0 254 699-996 17-270 (286)
326 cd07835 STKc_CDK1_like Catalyt 100.0 1.1E-32 2.3E-37 301.9 18.9 271 703-995 1-279 (283)
327 cd05633 STKc_GRK3 Catalytic do 100.0 3.2E-32 6.9E-37 296.9 21.8 243 708-996 1-255 (279)
328 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.2E-32 2.7E-37 308.8 18.9 277 700-996 4-291 (337)
329 cd06635 STKc_TAO1 Catalytic do 100.0 4E-32 8.6E-37 302.1 22.6 247 702-997 26-278 (317)
330 cd07842 STKc_CDK8_like Catalyt 100.0 3.2E-32 6.9E-37 303.3 21.8 210 702-924 1-220 (316)
331 cd07855 STKc_ERK5 Catalytic do 100.0 2E-32 4.3E-37 306.9 20.2 280 700-996 4-294 (334)
332 KOG0986 G protein-coupled rece 100.0 1.5E-33 3.3E-38 294.8 9.8 202 700-922 184-388 (591)
333 cd07836 STKc_Pho85 Catalytic d 100.0 3.6E-32 7.7E-37 297.9 21.2 273 702-995 1-280 (284)
334 cd08226 PK_STRAD_beta Pseudoki 100.0 3E-32 6.6E-37 304.6 21.0 276 707-996 4-308 (328)
335 cd07852 STKc_MAPK15 Catalytic 100.0 2E-32 4.4E-37 307.4 19.6 275 700-996 6-295 (337)
336 cd06616 PKc_MKK4 Catalytic dom 100.0 2.9E-32 6.2E-37 299.3 20.4 255 702-996 5-267 (288)
337 cd07864 STKc_CDK12 Catalytic d 100.0 3.8E-32 8.3E-37 300.5 21.5 281 698-995 4-298 (302)
338 PHA03390 pk1 serine/threonine- 100.0 8.7E-32 1.9E-36 291.4 23.4 250 694-995 7-261 (267)
339 cd07840 STKc_CDK9_like Catalyt 100.0 4.2E-32 9.1E-37 297.9 21.1 273 703-995 1-283 (287)
340 cd07831 STKc_MOK Catalytic dom 100.0 5.4E-32 1.2E-36 296.2 21.9 269 703-995 1-278 (282)
341 KOG0666 Cyclin C-dependent kin 100.0 4.7E-33 1E-37 277.7 12.1 209 700-922 23-242 (438)
342 cd07838 STKc_CDK4_6_like Catal 100.0 7.9E-32 1.7E-36 295.7 23.2 275 703-995 1-283 (287)
343 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.1E-31 2.4E-36 290.5 23.9 254 701-995 2-260 (264)
344 cd05122 PKc_STE Catalytic doma 100.0 1.2E-31 2.6E-36 288.0 24.0 250 702-995 1-250 (253)
345 cd06657 STKc_PAK4 Catalytic do 100.0 4E-32 8.6E-37 298.0 20.6 244 707-995 26-269 (292)
346 KOG0983 Mitogen-activated prot 100.0 4.1E-33 9E-38 273.3 11.2 252 702-996 93-349 (391)
347 cd08216 PK_STRAD Pseudokinase 100.0 1E-31 2.2E-36 298.8 24.1 266 713-996 12-295 (314)
348 KOG0586 Serine/threonine prote 100.0 1.1E-32 2.4E-37 301.6 15.5 203 698-923 53-258 (596)
349 cd07854 STKc_MAPK4_6 Catalytic 100.0 3.8E-32 8.3E-37 305.4 19.8 276 701-995 5-299 (342)
350 PLN00009 cyclin-dependent kina 100.0 4.3E-32 9.3E-37 298.8 19.5 272 701-995 2-283 (294)
351 cd05577 STKc_GRK Catalytic dom 100.0 1.2E-31 2.6E-36 292.4 22.3 245 709-995 1-253 (277)
352 cd08215 STKc_Nek Catalytic dom 100.0 1.4E-31 3E-36 288.7 22.3 252 702-995 1-254 (258)
353 cd06627 STKc_Cdc7_like Catalyt 100.0 1.6E-31 3.5E-36 287.5 22.3 248 702-995 1-250 (254)
354 cd07866 STKc_BUR1 Catalytic do 100.0 1.3E-31 2.8E-36 297.7 22.1 283 700-995 7-307 (311)
355 cd05118 STKc_CMGC Catalytic do 100.0 7.2E-32 1.6E-36 295.3 19.6 270 703-995 1-279 (283)
356 cd05572 STKc_cGK_PKG Catalytic 100.0 1.1E-31 2.4E-36 290.2 20.7 242 709-995 1-251 (262)
357 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.3E-31 2.9E-36 301.2 21.4 277 694-996 10-300 (345)
358 cd05579 STKc_MAST_like Catalyt 100.0 6.7E-32 1.5E-36 292.4 18.3 253 709-998 1-256 (265)
359 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 7.7E-32 1.7E-36 300.6 19.2 271 697-996 6-288 (328)
360 cd06618 PKc_MKK7 Catalytic dom 100.0 9.2E-32 2E-36 296.3 19.6 254 700-996 14-273 (296)
361 cd06606 STKc_MAPKKK Catalytic 100.0 2.7E-31 5.8E-36 286.6 22.7 254 702-995 1-256 (260)
362 cd07879 STKc_p38delta_MAPK13 C 100.0 1.6E-31 3.5E-36 300.3 21.7 279 700-1002 14-305 (342)
363 cd06634 STKc_TAO2 Catalytic do 100.0 1.5E-31 3.2E-36 296.2 21.0 248 701-997 15-268 (308)
364 cd05606 STKc_beta_ARK Catalyti 100.0 3.3E-31 7.2E-36 288.8 23.4 242 708-995 1-254 (278)
365 cd08530 STKc_CNK2-like Catalyt 100.0 1.8E-31 3.8E-36 287.6 21.0 250 702-995 1-252 (256)
366 cd07834 STKc_MAPK Catalytic do 100.0 6.4E-32 1.4E-36 302.7 17.6 285 702-1002 1-297 (330)
367 KOG0669 Cyclin T-dependent kin 100.0 1.1E-33 2.4E-38 274.0 2.7 282 701-996 17-315 (376)
368 KOG0690 Serine/threonine prote 100.0 9.5E-33 2.1E-37 276.5 9.4 203 700-924 167-372 (516)
369 PTZ00024 cyclin-dependent prot 100.0 1.7E-31 3.7E-36 299.7 20.7 279 701-995 8-312 (335)
370 PHA03210 serine/threonine kina 100.0 6.1E-32 1.3E-36 316.9 17.8 278 700-995 147-453 (501)
371 cd06633 STKc_TAO3 Catalytic do 100.0 3.8E-31 8.1E-36 293.5 22.7 245 703-996 23-273 (313)
372 cd07857 STKc_MPK1 Catalytic do 100.0 2.7E-31 5.8E-36 297.5 21.4 275 702-995 1-291 (332)
373 KOG0662 Cyclin-dependent kinas 100.0 1.1E-31 2.4E-36 246.9 14.8 199 702-922 3-205 (292)
374 cd07830 STKc_MAK_like Catalyti 100.0 3.4E-31 7.4E-36 290.0 21.1 266 703-995 1-279 (283)
375 cd05611 STKc_Rim15_like Cataly 100.0 3.2E-31 7E-36 286.2 20.4 245 707-998 2-250 (260)
376 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.8E-31 3.9E-36 299.9 18.5 274 699-995 13-297 (343)
377 cd05581 STKc_PDK1 Catalytic do 100.0 1.9E-31 4.2E-36 291.5 17.4 256 701-995 1-276 (280)
378 cd07829 STKc_CDK_like Catalyti 100.0 3.3E-31 7.1E-36 290.0 18.9 267 703-995 1-278 (282)
379 cd08222 STKc_Nek11 Catalytic d 100.0 4.8E-31 1E-35 284.9 19.8 251 702-995 1-256 (260)
380 KOG0671 LAMMER dual specificit 100.0 2.8E-32 6.2E-37 281.2 9.6 271 700-995 88-405 (415)
381 cd05583 STKc_MSK_N N-terminal 100.0 6.5E-31 1.4E-35 288.4 20.1 257 702-1000 1-267 (288)
382 cd07851 STKc_p38 Catalytic dom 100.0 3E-31 6.6E-36 298.2 17.7 270 699-995 13-297 (343)
383 cd05613 STKc_MSK1_N N-terminal 100.0 1.1E-30 2.4E-35 286.9 21.0 252 702-995 1-267 (290)
384 KOG4236 Serine/threonine prote 100.0 3.5E-32 7.6E-37 288.1 8.2 195 706-922 569-768 (888)
385 KOG0587 Traf2- and Nck-interac 100.0 4.2E-31 9.2E-36 298.1 16.7 265 693-995 11-281 (953)
386 cd05610 STKc_MASTL Catalytic d 100.0 2.4E-30 5.2E-35 312.8 23.5 148 700-861 3-153 (669)
387 KOG1006 Mitogen-activated prot 100.0 2.5E-32 5.3E-37 267.1 4.8 253 707-995 70-326 (361)
388 KOG0603 Ribosomal protein S6 k 100.0 7E-31 1.5E-35 289.2 15.5 240 700-995 321-562 (612)
389 KOG0612 Rho-associated, coiled 100.0 2.1E-31 4.6E-36 307.2 9.5 209 693-922 67-283 (1317)
390 cd05123 STKc_AGC Catalytic dom 100.0 7.1E-30 1.5E-34 274.0 20.5 237 709-992 1-240 (250)
391 KOG1151 Tousled-like protein k 100.0 2.6E-31 5.6E-36 276.0 8.1 264 700-994 462-739 (775)
392 KOG0696 Serine/threonine prote 100.0 5.4E-31 1.2E-35 271.6 9.7 204 699-924 347-554 (683)
393 cd05576 STKc_RPK118_like Catal 100.0 8.6E-30 1.9E-34 270.6 18.8 223 712-993 4-226 (237)
394 PLN03225 Serine/threonine-prot 100.0 1.9E-29 4E-34 296.9 21.8 277 699-996 130-450 (566)
395 KOG0668 Casein kinase II, alph 100.0 1.5E-30 3.3E-35 248.9 9.1 270 699-995 36-321 (338)
396 KOG0984 Mitogen-activated prot 100.0 3.1E-30 6.7E-35 243.4 9.8 207 702-927 47-259 (282)
397 KOG0695 Serine/threonine prote 100.0 1.2E-29 2.6E-34 255.0 12.7 201 700-922 249-453 (593)
398 KOG0614 cGMP-dependent protein 100.0 1.7E-30 3.8E-35 274.8 5.9 200 701-923 420-622 (732)
399 smart00220 S_TKc Serine/Threon 100.0 1E-28 2.2E-33 263.5 18.9 239 713-995 1-240 (244)
400 PLN03224 probable serine/threo 100.0 1.9E-28 4.1E-33 280.3 20.2 213 699-921 143-434 (507)
401 KOG1027 Serine/threonine prote 100.0 2.9E-29 6.2E-34 282.1 11.1 245 706-995 514-766 (903)
402 KOG0664 Nemo-like MAPK-related 100.0 4.5E-30 9.7E-35 251.4 2.9 203 703-922 55-260 (449)
403 KOG1152 Signal transduction se 100.0 4.2E-29 9E-34 268.6 10.1 199 699-921 559-770 (772)
404 KOG1290 Serine/threonine prote 100.0 5.6E-28 1.2E-32 255.8 17.3 137 701-846 78-222 (590)
405 KOG0608 Warts/lats-like serine 100.0 2.9E-28 6.4E-33 263.7 11.8 212 701-926 629-877 (1034)
406 KOG4237 Extracellular matrix p 99.9 4.3E-29 9.2E-34 257.7 1.1 404 169-595 68-498 (498)
407 KOG1167 Serine/threonine prote 99.9 4.5E-27 9.7E-32 246.7 14.4 280 698-996 33-381 (418)
408 KOG0576 Mitogen-activated prot 99.9 2.5E-28 5.4E-33 267.2 4.7 254 700-995 14-270 (829)
409 KOG0665 Jun-N-terminal kinase 99.9 2.6E-27 5.7E-32 238.9 10.1 268 700-995 16-309 (369)
410 KOG1345 Serine/threonine kinas 99.9 4.4E-27 9.5E-32 231.0 11.1 253 700-995 23-283 (378)
411 cd00180 PKc Catalytic domain o 99.9 1.6E-25 3.4E-30 233.0 21.0 211 709-996 1-214 (215)
412 KOG4237 Extracellular matrix p 99.9 1.4E-27 3E-32 246.6 4.7 298 51-356 35-359 (498)
413 KOG0670 U4/U6-associated splic 99.9 1E-26 2.2E-31 247.0 7.3 204 697-923 428-638 (752)
414 smart00221 STYKc Protein kinas 99.9 4.8E-25 1E-29 232.2 18.7 200 703-922 1-202 (225)
415 PLN03210 Resistant to P. syrin 99.9 2.3E-23 4.9E-28 266.4 20.7 363 69-474 531-903 (1153)
416 PLN03210 Resistant to P. syrin 99.9 1.8E-23 3.9E-28 267.4 19.2 344 185-595 551-903 (1153)
417 smart00750 KIND kinase non-cat 99.9 1.2E-23 2.7E-28 212.2 14.1 171 788-1004 1-173 (176)
418 KOG0195 Integrin-linked kinase 99.9 4.2E-24 9.2E-29 209.6 8.5 246 706-1001 195-447 (448)
419 PRK15370 E3 ubiquitin-protein 99.9 3.9E-23 8.4E-28 246.2 18.5 252 19-302 56-359 (754)
420 PLN00181 protein SPA1-RELATED; 99.9 4.8E-24 1E-28 265.0 11.1 207 754-995 28-264 (793)
421 PRK15387 E3 ubiquitin-protein 99.9 2.4E-23 5.1E-28 246.0 15.1 259 244-603 205-463 (788)
422 PRK15387 E3 ubiquitin-protein 99.9 1E-23 2.2E-28 249.1 11.7 146 393-584 323-468 (788)
423 PRK09188 serine/threonine prot 99.9 6.9E-23 1.5E-27 224.7 14.8 173 699-895 16-195 (365)
424 KOG1164 Casein kinase (serine/ 99.9 2.1E-21 4.6E-26 214.9 23.1 270 702-1003 19-300 (322)
425 KOG1165 Casein kinase (serine/ 99.9 2.9E-21 6.4E-26 195.6 18.0 265 701-1001 28-300 (449)
426 KOG1163 Casein kinase (serine/ 99.9 4.7E-21 1E-25 185.7 14.4 263 700-998 14-282 (341)
427 PRK15370 E3 ubiquitin-protein 99.8 1.7E-21 3.6E-26 232.3 11.2 215 60-306 170-384 (754)
428 COG0515 SPS1 Serine/threonine 99.8 1.1E-18 2.4E-23 196.1 22.8 264 703-996 2-275 (384)
429 KOG0590 Checkpoint kinase and 99.8 1.2E-20 2.6E-25 221.1 6.2 256 705-995 322-584 (601)
430 KOG1240 Protein kinase contain 99.8 2.1E-20 4.5E-25 216.1 5.2 250 702-999 24-294 (1431)
431 cd05147 RIO1_euk RIO kinase fa 99.8 2.9E-19 6.2E-24 180.7 11.9 140 706-863 2-168 (190)
432 KOG0617 Ras suppressor protein 99.8 3E-21 6.5E-26 177.2 -2.8 184 388-601 29-215 (264)
433 KOG1023 Natriuretic peptide re 99.8 3.3E-19 7.1E-24 198.5 12.6 218 752-1002 1-226 (484)
434 PRK10359 lipopolysaccharide co 99.8 1.7E-19 3.7E-24 183.4 8.6 175 700-914 30-216 (232)
435 KOG4158 BRPK/PTEN-induced prot 99.8 8E-19 1.7E-23 181.8 12.6 207 756-998 274-512 (598)
436 cd05145 RIO1_like RIO kinase f 99.8 2.3E-18 4.9E-23 175.2 14.4 140 706-864 2-169 (190)
437 KOG0617 Ras suppressor protein 99.8 1.3E-20 2.7E-25 173.2 -3.1 157 90-278 29-186 (264)
438 PRK12274 serine/threonine prot 99.8 3.6E-18 7.8E-23 169.4 11.6 192 704-922 5-209 (218)
439 cd00116 LRR_RI Leucine-rich re 99.7 3.6E-20 7.7E-25 206.5 -4.9 220 337-597 75-319 (319)
440 PLN03150 hypothetical protein; 99.7 5.9E-18 1.3E-22 202.0 12.7 157 21-180 367-527 (623)
441 PF14531 Kinase-like: Kinase-l 99.7 3.2E-18 6.9E-23 179.4 8.7 240 702-987 13-288 (288)
442 PRK10345 hypothetical protein; 99.7 3.2E-17 6.9E-22 166.9 14.5 139 704-859 5-156 (210)
443 cd00116 LRR_RI Leucine-rich re 99.7 1.5E-19 3.3E-24 201.4 -6.8 284 122-451 2-318 (319)
444 KOG1166 Mitotic checkpoint ser 99.7 5E-17 1.1E-21 193.4 14.0 198 697-918 694-901 (974)
445 smart00090 RIO RIO-like kinase 99.7 9E-17 1.9E-21 168.2 12.4 145 700-863 27-199 (237)
446 KOG0603 Ribosomal protein S6 k 99.7 1.1E-17 2.3E-22 185.6 2.8 187 708-922 1-193 (612)
447 KOG1033 eIF-2alpha kinase PEK/ 99.7 1.6E-17 3.5E-22 180.7 3.7 129 776-915 329-457 (516)
448 cd05144 RIO2_C RIO kinase fami 99.6 1.5E-15 3.3E-20 155.9 13.2 144 695-863 9-176 (198)
449 PRK14879 serine/threonine prot 99.6 2.7E-15 5.9E-20 156.1 14.0 134 707-861 2-143 (211)
450 KOG0606 Microtubule-associated 99.6 2.2E-16 4.7E-21 183.4 5.2 172 700-922 82-260 (1205)
451 PRK09605 bifunctional UGMP fam 99.6 4.2E-15 9.1E-20 176.1 14.4 137 700-861 332-476 (535)
452 TIGR03724 arch_bud32 Kae1-asso 99.6 8E-15 1.7E-19 151.0 12.4 130 708-861 1-138 (199)
453 PLN03150 hypothetical protein; 99.5 6.5E-15 1.4E-19 176.0 9.0 112 515-626 420-533 (623)
454 KOG0532 Leucine-rich repeat (L 99.5 4E-16 8.8E-21 169.3 -1.9 176 416-601 75-250 (722)
455 cd05119 RIO RIO kinase family, 99.5 4.7E-14 1E-18 143.7 11.9 136 706-863 2-165 (187)
456 PRK01723 3-deoxy-D-manno-octul 99.5 3.6E-13 7.7E-18 141.5 14.8 139 706-861 36-191 (239)
457 KOG0532 Leucine-rich repeat (L 99.5 1.4E-15 3.1E-20 165.2 -4.1 178 372-584 79-256 (722)
458 cd05120 APH_ChoK_like Aminogly 99.5 3.8E-13 8.2E-18 131.9 12.3 136 705-862 2-139 (155)
459 KOG0590 Checkpoint kinase and 99.5 8.3E-15 1.8E-19 172.2 -0.2 257 700-994 19-284 (601)
460 KOG1266 Protein kinase [Signal 99.4 5E-13 1.1E-17 136.3 8.0 162 751-919 120-281 (458)
461 COG4886 Leucine-rich repeat (L 99.4 3.3E-13 7.2E-18 154.8 6.0 181 391-604 115-296 (394)
462 COG4886 Leucine-rich repeat (L 99.3 1.6E-12 3.4E-17 149.2 9.1 177 170-361 118-295 (394)
463 TIGR01982 UbiB 2-polyprenylphe 99.3 9E-12 1.9E-16 142.4 11.2 143 706-864 122-309 (437)
464 KOG0601 Cyclin-dependent kinas 99.3 3.2E-12 7E-17 142.8 6.3 201 702-920 115-327 (524)
465 KOG1243 Protein kinase [Genera 99.3 3.6E-11 7.8E-16 135.3 14.0 172 719-918 30-201 (690)
466 KOG3207 Beta-tubulin folding c 99.2 5.1E-12 1.1E-16 134.1 2.1 211 115-327 118-340 (505)
467 PRK04750 ubiB putative ubiquin 99.2 7.6E-11 1.6E-15 135.9 11.0 149 701-864 120-316 (537)
468 KOG1909 Ran GTPase-activating 99.1 2.5E-12 5.4E-17 133.0 -3.2 248 169-452 31-310 (382)
469 cd05146 RIO3_euk RIO kinase fa 99.1 6.5E-10 1.4E-14 111.1 14.1 137 707-863 3-175 (197)
470 KOG3207 Beta-tubulin folding c 99.1 6.4E-12 1.4E-16 133.3 -0.7 189 166-355 119-313 (505)
471 cd05151 ChoK Choline Kinase (C 99.1 2.6E-10 5.6E-15 114.1 9.8 130 706-860 3-135 (170)
472 KOG0531 Protein phosphatase 1, 99.1 2.2E-11 4.8E-16 139.8 0.2 129 166-302 70-199 (414)
473 KOG0531 Protein phosphatase 1, 99.1 5E-11 1.1E-15 136.8 2.5 219 91-326 69-290 (414)
474 KOG1259 Nischarin, modulator o 99.0 3.7E-11 8E-16 121.0 0.6 93 230-327 274-366 (490)
475 KOG1259 Nischarin, modulator o 99.0 8.6E-11 1.9E-15 118.4 2.6 133 439-602 283-416 (490)
476 PF14580 LRR_9: Leucine-rich r 99.0 2.4E-10 5.2E-15 111.9 4.5 129 90-224 15-148 (175)
477 KOG1909 Ran GTPase-activating 99.0 1.5E-11 3.3E-16 127.3 -6.2 142 240-428 157-310 (382)
478 KOG0601 Cyclin-dependent kinas 98.9 8.3E-10 1.8E-14 123.8 6.2 248 698-998 262-516 (524)
479 PF14580 LRR_9: Leucine-rich r 98.9 6.6E-10 1.4E-14 108.8 2.8 111 237-356 16-126 (175)
480 COG4248 Uncharacterized protei 98.9 9E-08 2E-12 101.8 18.2 275 704-1005 14-305 (637)
481 COG3642 Mn2+-dependent serine/ 98.9 2.3E-08 5E-13 95.8 12.5 129 707-861 2-140 (204)
482 PF13855 LRR_8: Leucine rich r 98.9 1.7E-09 3.6E-14 87.1 3.8 60 538-597 2-61 (61)
483 KOG0606 Microtubule-associated 98.9 1.1E-09 2.3E-14 128.7 3.4 211 699-923 802-1038(1205)
484 cd05154 ACAD10_11_like Acyl-Co 98.9 1.8E-08 3.8E-13 105.7 12.4 145 707-861 4-206 (223)
485 KOG4658 Apoptotic ATPase [Sign 98.8 4E-09 8.6E-14 129.0 7.4 250 66-320 541-826 (889)
486 PF13855 LRR_8: Leucine rich r 98.8 3.2E-09 6.9E-14 85.4 3.7 61 513-573 1-61 (61)
487 PF08263 LRRNT_2: Leucine rich 98.8 4.8E-09 1E-13 77.0 4.2 41 25-66 2-43 (43)
488 KOG3741 Poly(A) ribonuclease s 98.8 8.7E-08 1.9E-12 104.8 14.4 178 713-919 288-475 (655)
489 KOG4658 Apoptotic ATPase [Sign 98.8 4.5E-09 9.7E-14 128.5 5.1 129 94-227 523-653 (889)
490 KOG3087 Serine/threonine prote 98.7 8.5E-08 1.8E-12 91.3 11.3 140 705-860 11-164 (229)
491 PF01163 RIO1: RIO1 family; I 98.7 6.7E-08 1.5E-12 96.4 11.0 126 716-863 1-157 (188)
492 PRK15123 lipopolysaccharide co 98.7 3.8E-07 8.3E-12 96.8 15.8 144 709-861 30-194 (268)
493 COG0478 RIO-like serine/threon 98.6 1.4E-07 3E-12 96.0 10.3 142 695-860 85-250 (304)
494 KOG2982 Uncharacterized conser 98.5 3.1E-08 6.7E-13 100.4 2.0 161 118-302 71-237 (418)
495 KOG4579 Leucine-rich repeat (L 98.5 1.4E-08 3E-13 91.2 -1.9 107 494-604 58-165 (177)
496 KOG2982 Uncharacterized conser 98.5 6E-08 1.3E-12 98.3 2.4 185 161-357 64-263 (418)
497 PRK09902 hypothetical protein; 98.5 5.5E-06 1.2E-10 83.0 15.8 159 693-861 10-179 (216)
498 KOG1859 Leucine-rich repeat pr 98.4 6.9E-09 1.5E-13 116.6 -6.8 128 466-601 166-295 (1096)
499 KOG2137 Protein kinase [Signal 98.4 1.2E-07 2.6E-12 107.9 2.8 101 817-919 107-208 (700)
500 PF06293 Kdo: Lipopolysacchari 98.4 4.6E-06 1E-10 85.8 13.6 111 742-862 55-171 (206)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1e-117 Score=1135.19 Aligned_cols=919 Identities=31% Similarity=0.527 Sum_probs=782.3
Q ss_pred CChhhHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCccceeeCCCCCeEEEEEeecCCcccccCccccCCCCCCeeeec
Q 047768 23 SNETDCLSLLAIKSQLHDPLGVTSSWNRSACVNLCQHWTGVTCGRRNQRVTKLDLRNQSIGGILSPYVGNLSFLRYINIA 102 (1009)
Q Consensus 23 ~~~~d~~aLl~~k~~~~~~~~~~~sW~~~~~~~~c~~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~ 102 (1009)
..++|+.||++||+++.||.+.+.+|+.. .+|| .|+||+|++ .++|+.|||++++++|.+++.+..+++|++|+|+
T Consensus 26 ~~~~~~~~l~~~~~~~~~~~~~~~~w~~~--~~~c-~w~gv~c~~-~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls 101 (968)
T PLN00113 26 LHAEELELLLSFKSSINDPLKYLSNWNSS--ADVC-LWQGITCNN-SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLS 101 (968)
T ss_pred CCHHHHHHHHHHHHhCCCCcccCCCCCCC--CCCC-cCcceecCC-CCcEEEEEecCCCccccCChHHhCCCCCCEEECC
Confidence 36789999999999998898888999754 3555 899999986 4699999999999999999999999999999999
Q ss_pred CCcCCccCCcccc-CccccccccccccccCCCCCCCCcCCCcCcEEecccccccCCCchHHhhhccCCcCeEeecCccCC
Q 047768 103 DNDFHGEIPDRIG-NLFRLETLVLANNSFSGRIPTNLSHCSKLITFSAHRNNLVGEIPEELISRRLFNLQGLSVGDNQLT 181 (1009)
Q Consensus 103 ~n~~~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~n~l~ 181 (1009)
+|+++|.+|..+. ++++|++|||++|.++|.+|. +.+++|++|++++|.+++.+|..+ ..+.+|++|+|++|.+.
T Consensus 102 ~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~--~~l~~L~~L~L~~n~l~ 177 (968)
T PLN00113 102 NNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDI--GSFSSLKVLDLGGNVLV 177 (968)
T ss_pred CCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHH--hcCCCCCEEECccCccc
Confidence 9999999998765 999999999999999999886 568999999999999999999987 67999999999999999
Q ss_pred CCCCcccCCccccceeecccCcccCCCCcccccccccccccccCccCCCCCCCcccCCChHHHHHhhCCccCCCCChhhc
Q 047768 182 GQLPASIGNLSALRVIDIRTNRLWGKIPITLSQLTSLAYLHVGDNHFSGTIPPSVYNISSLVEIYLYGNRFTGSLPIEIG 261 (1009)
Q Consensus 182 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~ 261 (1009)
+.+|..|+++++|++|+|++|++.+.+|..|+++++|++|+|++|++++.+|..+.++++|++|++++|++++.+|..+
T Consensus 178 ~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l- 256 (968)
T PLN00113 178 GKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSL- 256 (968)
T ss_pred ccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhH-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998888776
Q ss_pred cCCCcccceeccccccCCCCCCCcCcccccccccccccccccccccccccccccccccccccccCCCCCCCcchhhhccc
Q 047768 262 KNLPNLRNFVIYTNNFTGSLPDSFSNASNLEVLHLAENQFRGQVSINFNGLKDLSMLGLATNFLGNGAANDLDFVDLLTN 341 (1009)
Q Consensus 262 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~ 341 (1009)
.++++|++|+|++|++++.+|..+.++++|++|+|++|++.+..+..|..+++|+.|++++|.+.... +..+..
T Consensus 257 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~------~~~~~~ 330 (968)
T PLN00113 257 GNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKI------PVALTS 330 (968)
T ss_pred hCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcC------ChhHhc
Confidence 46999999999999999999999999999999999999999999999999999999999999987533 356788
Q ss_pred ccccceEEccCCCCCCcCchhhhhhcccceEEEcCCCccccCCCccccCcCccCEEEccCCCCCCCCCCCcCCcccccce
Q 047768 342 CTKLQYLYLADNGFGGVLPHSIANLSTALIDFNLGKNQIYGTIPPGIANLVNLNSLRMEANRLTGTIPHVIGELKNLQLL 421 (1009)
Q Consensus 342 l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 421 (1009)
+++|+.|++++|.+.+.+|..+..+ ..|+.|++++|++++.+|..+..+++|+.|++++|++.+.+|..+..+++|+.|
T Consensus 331 l~~L~~L~L~~n~l~~~~p~~l~~~-~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L 409 (968)
T PLN00113 331 LPRLQVLQLWSNKFSGEIPKNLGKH-NNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRV 409 (968)
T ss_pred CCCCCEEECcCCCCcCcCChHHhCC-CCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEE
Confidence 9999999999999999999999888 689999999999999999999999999999999999999999999999999999
Q ss_pred ecccccccCCCCcccccccccccccccCcccccccCCCCCCCCCccccccCCCCccCCCchhhhhhccceeeEecCCCcc
Q 047768 422 HLHANFLQGTIPSSLGNLTLLTYLSFGANNLQGNIPFSLGNCKNLMFFFAPRNKLTGALPQQILEITTLSLSLDLSDNLL 501 (1009)
Q Consensus 422 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l 501 (1009)
+|++|++++.+|..|.+++.|++|++++|++++.+|..+..+++|+.|++++|++.+.+|..+. . .....||+++|++
T Consensus 410 ~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~-~-~~L~~L~ls~n~l 487 (968)
T PLN00113 410 RLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFG-S-KRLENLDLSRNQF 487 (968)
T ss_pred ECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccc-c-ccceEEECcCCcc
Confidence 9999999999999999999999999999999999999999999999999999999998887543 2 3345699999999
Q ss_pred CCCCCCCccCCCCCCeeeccccccCCCccccccCCCCccEEEecCcccccccccccccccccceEcCCCccccccccccc
Q 047768 502 NGSLPLGVGNLKSLVRLGIARNQFSGQIPVTLGACTSLEYVELQGNSFSGTIPQSLSSLTSIKELDLSQNNFSGQIPKYL 581 (1009)
Q Consensus 502 ~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 581 (1009)
++.+|..+.++++|+.|+|++|++++.+|..++.+++|++|+|++|+++|.+|..|+.+++|+.|||++|+++|.+|..+
T Consensus 488 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l 567 (968)
T PLN00113 488 SGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNL 567 (968)
T ss_pred CCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCceecccccCcccCCCCCcccCccccccccCCCcCCCCCCCCCCCCCcCCCCCCCcceeeeehhhhHHHHHHHH
Q 047768 582 ENLSFLQYLNLSYNHFEGEVPTKGIFKNKTGFSIVGNGKLCGGLDELHLPSCQARGSRKPNVNLVKVVIPVIGGSCLILS 661 (1009)
Q Consensus 582 ~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (1009)
..+++|++|++++|+++|.+|..+++.++....+.||+.+||+......+.|.... .... ...+++.++++++++++
T Consensus 568 ~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~--~~~~-~~~~~~~~~~~~~~~~~ 644 (968)
T PLN00113 568 GNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVR--KTPS-WWFYITCTLGAFLVLAL 644 (968)
T ss_pred hcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCcccc--ccce-eeeehhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999976554445453221 1111 22222223333333333
Q ss_pred hhheeeeeeeccccC-cCCCC--cccccc-C-----CccCHHHHHHHhccCccCCcccccCCceEEEEEEecCCeEEEEE
Q 047768 662 VCIFIFYARRRRSAH-KSSNT--SQMEQQ-F-----PMVSYKELSKATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVK 732 (1009)
Q Consensus 662 v~~~~~~~~~~~~~~-~~~~~--~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK 732 (1009)
++++++++++|+... +.... ...+.. + ..+++++ ....|...+.||+|+||+||+|+++.+++.||||
T Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK 721 (968)
T PLN00113 645 VAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITIND---ILSSLKEENVISRGKKGASYKGKSIKNGMQFVVK 721 (968)
T ss_pred HHHHHHHHHhhhcccccccccccccccccccccccchhhhHHH---HHhhCCcccEEccCCCeeEEEEEECCCCcEEEEE
Confidence 333333323222111 11000 000000 0 1122222 3346777889999999999999998899999999
Q ss_pred EeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHH
Q 047768 733 VINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRL 812 (1009)
Q Consensus 733 ~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~ 812 (1009)
+++.... ...+|++++++++||||++++|+|... ...++||||+++|+|.++++. ++|.++.
T Consensus 722 ~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~-----~~~~lv~Ey~~~g~L~~~l~~---------l~~~~~~ 783 (968)
T PLN00113 722 EINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSE-----KGAYLIHEYIEGKNLSEVLRN---------LSWERRR 783 (968)
T ss_pred EccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcC-----CCCEEEEeCCCCCcHHHHHhc---------CCHHHHH
Confidence 9853322 223568899999999999999998653 567999999999999999963 7899999
Q ss_pred HHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccCCCCCCCccccCCccccccccccccCcccc
Q 047768 813 NIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYG 892 (1009)
Q Consensus 813 ~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 892 (1009)
.++.|+|+|++|||..+.++|+||||||+||+++.++.+++. ||.+..... .....||+.|||||++
T Consensus 784 ~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~------------~~~~~~t~~y~aPE~~ 850 (968)
T PLN00113 784 KIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT------------DTKCFISSAYVAPETR 850 (968)
T ss_pred HHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc------------CCCccccccccCcccc
Confidence 999999999999997766799999999999999999988876 665543221 1123578999999999
Q ss_pred CCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccch-hhhccCCCCCChhhhhhhccccccHHHHHH
Q 047768 893 LGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEK-VMEIVDPSLLPLEEERTNSRRVRNEECLVA 971 (1009)
Q Consensus 893 ~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~ 971 (1009)
.+..++.++|||||||++|||+||+.||...........+|........ ...++|+.+.... ....+++.+
T Consensus 851 ~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 922 (968)
T PLN00113 851 ETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDV--------SVNQNEIVE 922 (968)
T ss_pred cCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCC--------CccHHHHHH
Confidence 9999999999999999999999999999755444555666655443322 4444554443221 122356678
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 047768 972 VIKTGVACSIESPFDRMEMTDVVVKLCHARQNF 1004 (1009)
Q Consensus 972 l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~~~ 1004 (1009)
+.+++.+||+.||++||||+||+++|+++.+..
T Consensus 923 ~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 923 VMNLALHCTATDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred HHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence 899999999999999999999999999987744
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.2e-62 Score=625.93 Aligned_cols=515 Identities=34% Similarity=0.535 Sum_probs=482.4
Q ss_pred CCCCeeeecCCcCCccCCccccCccccccccccccccCCCCCCCCc-CCCcCcEEecccccccCCCchHHhhhccCCcCe
Q 047768 94 SFLRYINIADNDFHGEIPDRIGNLFRLETLVLANNSFSGRIPTNLS-HCSKLITFSAHRNNLVGEIPEELISRRLFNLQG 172 (1009)
Q Consensus 94 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~ 172 (1009)
.+++.|||++|+++|.+|..|..+++|++|||++|+++|.+|..+. ++++|++|++++|++++.+|.. .+.+|++
T Consensus 69 ~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~----~l~~L~~ 144 (968)
T PLN00113 69 SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRG----SIPNLET 144 (968)
T ss_pred CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCcc----ccCCCCE
Confidence 4689999999999999999999999999999999999999998765 9999999999999999999874 4789999
Q ss_pred EeecCccCCCCCCcccCCccccceeecccCcccCCCCcccccccccccccccCccCCCCCCCcccCCChHHHHHhhCCcc
Q 047768 173 LSVGDNQLTGQLPASIGNLSALRVIDIRTNRLWGKIPITLSQLTSLAYLHVGDNHFSGTIPPSVYNISSLVEIYLYGNRF 252 (1009)
Q Consensus 173 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 252 (1009)
|+|++|.+++.+|..++++++|++|+|++|.+.+.+|..|.++++|++|+|++|++++.+|..+.++++|++|+|++|++
T Consensus 145 L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l 224 (968)
T PLN00113 145 LDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNL 224 (968)
T ss_pred EECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChhhccCCCcccceeccccccCCCCCCCcCcccccccccccccccccccccccccccccccccccccccCCCCCCC
Q 047768 253 TGSLPIEIGKNLPNLRNFVIYTNNFTGSLPDSFSNASNLEVLHLAENQFRGQVSINFNGLKDLSMLGLATNFLGNGAAND 332 (1009)
Q Consensus 253 ~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~ 332 (1009)
++.+|..+. ++++|++|++++|++++.+|..|+++++|++|+|++|++.+..+..+..+++|+.|++++|.+...
T Consensus 225 ~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~---- 299 (968)
T PLN00113 225 SGEIPYEIG-GLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGE---- 299 (968)
T ss_pred CCcCChhHh-cCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccC----
Confidence 989998775 699999999999999999999999999999999999999999999999999999999999998653
Q ss_pred cchhhhcccccccceEEccCCCCCCcCchhhhhhcccceEEEcCCCccccCCCccccCcCccCEEEccCCCCCCCCCCCc
Q 047768 333 LDFVDLLTNCTKLQYLYLADNGFGGVLPHSIANLSTALIDFNLGKNQIYGTIPPGIANLVNLNSLRMEANRLTGTIPHVI 412 (1009)
Q Consensus 333 ~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 412 (1009)
++..+.++++|++|++++|.+++..|..+..+ ..|+.|++++|.+++.+|..+..+++|+.|++++|++++.+|..+
T Consensus 300 --~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l-~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~ 376 (968)
T PLN00113 300 --IPELVIQLQNLEILHLFSNNFTGKIPVALTSL-PRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGL 376 (968)
T ss_pred --CChhHcCCCCCcEEECCCCccCCcCChhHhcC-CCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhH
Confidence 34678899999999999999999999999888 679999999999999999999999999999999999999999999
Q ss_pred CCcccccceecccccccCCCCcccccccccccccccCcccccccCCCCCCCCCccccccCCCCccCCCchhhhhhcccee
Q 047768 413 GELKNLQLLHLHANFLQGTIPSSLGNLTLLTYLSFGANNLQGNIPFSLGNCKNLMFFFAPRNKLTGALPQQILEITTLSL 492 (1009)
Q Consensus 413 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~ 492 (1009)
..+++|+.|++++|++.+.+|..+..+++|+.|++++|++++.+|..+.++++|+.+++++|.+++.+|..+.....+.
T Consensus 377 ~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~- 455 (968)
T PLN00113 377 CSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQ- 455 (968)
T ss_pred hCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988777665554
Q ss_pred eEecCCCccCCCCCCCccCCCCCCeeeccccccCCCccccccCCCCccEEEecCcccccccccccccccccceEcCCCcc
Q 047768 493 SLDLSDNLLNGSLPLGVGNLKSLVRLGIARNQFSGQIPVTLGACTSLEYVELQGNSFSGTIPQSLSSLTSIKELDLSQNN 572 (1009)
Q Consensus 493 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 572 (1009)
.|++++|++.+.+|..+ ..++|+.||+++|++++.+|..+..+++|+.|+|++|++++.+|..++++++|++|+|++|.
T Consensus 456 ~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 534 (968)
T PLN00113 456 MLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQ 534 (968)
T ss_pred EEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCc
Confidence 59999999999999876 45899999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccccCceecccccCcccCCCC-CcccCccccccccCCCcC
Q 047768 573 FSGQIPKYLENLSFLQYLNLSYNHFEGEVPTK-GIFKNKTGFSIVGNGKLC 622 (1009)
Q Consensus 573 l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~lc 622 (1009)
++|.+|..|..+++|+.|||++|+++|.+|.. ..+..+....+.+|+..+
T Consensus 535 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~ 585 (968)
T PLN00113 535 LSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHG 585 (968)
T ss_pred ccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCccee
Confidence 99999999999999999999999999999974 345556666777777544
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-48 Score=426.32 Aligned_cols=289 Identities=42% Similarity=0.671 Sum_probs=244.3
Q ss_pred cCCccCHHHHHHHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEee
Q 047768 687 QFPMVSYKELSKATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTI 766 (1009)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 766 (1009)
....++++++..++++|...+.||+|+||.||+|... +++.||||+++.......++|.+|++++.+++|||+|+++||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence 4567899999999999999999999999999999996 568999998865443214669999999999999999999999
Q ss_pred eeccccCCCc-eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceee
Q 047768 767 CSSIDFKGVD-FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLL 845 (1009)
Q Consensus 767 ~~~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill 845 (1009)
|.+. + ..++|||||++|+|.++++..... +++|.+|.+||.++|+||+|||+.++|+||||||||+|||+
T Consensus 140 C~e~-----~~~~~LVYEym~nGsL~d~L~~~~~~----~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL 210 (361)
T KOG1187|consen 140 CLEG-----GEHRLLVYEYMPNGSLEDHLHGKKGE----PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL 210 (361)
T ss_pred EecC-----CceEEEEEEccCCCCHHHHhCCCCCC----CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE
Confidence 9864 3 589999999999999999986642 58999999999999999999999999999999999999999
Q ss_pred CCCCceEEeccccccccCCCCCCCccccCCccccc-cccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccc
Q 047768 846 DHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGV-KGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMF 924 (1009)
Q Consensus 846 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~ 924 (1009)
|+++++||+|||+|+...... ...... .||.+|+|||++..+..+.|+|||||||++.|++||+.|.+...
T Consensus 211 D~~~~aKlsDFGLa~~~~~~~--------~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~ 282 (361)
T KOG1187|consen 211 DEDFNAKLSDFGLAKLGPEGD--------TSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSR 282 (361)
T ss_pred CCCCCEEccCccCcccCCccc--------cceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCC
Confidence 999999999999996544200 111111 79999999999999999999999999999999999999877543
Q ss_pred -cCCccHHHHHHHhccc-hhhhccCCCCCC-hhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 047768 925 -NEGLTLHEFAKRALPE-KVMEIVDPSLLP-LEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHAR 1001 (1009)
Q Consensus 925 -~~~~~~~~~~~~~~~~-~~~~~~d~~l~~-~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~ 1001 (1009)
.....+..|....+.. .+.+++|+.+.. .+. ..++..++..++.+|++.+|..||+|.||++.|+.+.
T Consensus 283 ~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~---------~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 283 PRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYP---------DEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred CcccccHHHHHHHHHHCcchhheeCCCccCCCCC---------hHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 3344577887666555 599999999863 211 1156778999999999999999999999999997665
Q ss_pred H
Q 047768 1002 Q 1002 (1009)
Q Consensus 1002 ~ 1002 (1009)
.
T Consensus 354 ~ 354 (361)
T KOG1187|consen 354 S 354 (361)
T ss_pred c
Confidence 4
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-45 Score=403.42 Aligned_cols=260 Identities=33% Similarity=0.487 Sum_probs=212.0
Q ss_pred cCccCCcccccCCceEEEEEEecCCeE-EEEEEeecccccc--hHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGML-VAVKVINLEQKGG--SKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~-vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
+..+.+.+|+|+||+||+|.|+ |+. ||||++....... .+.|.+|+.+|++++|||||+++|+|.... ...
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~----~~~ 115 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPP----GSL 115 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC----Cce
Confidence 3344566999999999999996 666 9999997544332 458999999999999999999999998641 168
Q ss_pred EEEEeccCCCCHHHHHhcc-CCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCC-ceecCCCCCceeeCCCC-ceEEec
Q 047768 779 ALVYEYMQNGSLEEWLHQR-DDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPP-IVHGDLKPSNVLLDHDM-VAHVSD 855 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~-~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~-ivHrdlk~~Nill~~~~-~~kl~D 855 (1009)
++||||+++|+|.++++.. .. .+++..+..+|.|||+||.|||++ + ||||||||+|||++.++ ++||+|
T Consensus 116 ~iVtEy~~~GsL~~~l~~~~~~-----~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~D 187 (362)
T KOG0192|consen 116 CIVTEYMPGGSLSVLLHKKRKR-----KLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIAD 187 (362)
T ss_pred EEEEEeCCCCcHHHHHhhcccC-----CCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECC
Confidence 9999999999999999884 32 499999999999999999999999 7 99999999999999997 999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccC--CCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHH
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGL--GGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEF 933 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~ 933 (1009)
||+++...... ...+...||+.|||||++. ...|+.|+|||||||++|||+||+.||...... ......
T Consensus 188 FGlsr~~~~~~--------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~-~~~~~v 258 (362)
T KOG0192|consen 188 FGLSREKVISK--------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV-QVASAV 258 (362)
T ss_pred Cccceeecccc--------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH-HHHHHH
Confidence 99998765431 2223367999999999999 569999999999999999999999999865431 111111
Q ss_pred HHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhc
Q 047768 934 AKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQNFLG 1006 (1009)
Q Consensus 934 ~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~~~~~ 1006 (1009)
+.....+ ..+..++..+..++..||+.||+.||++.|++..|+.+...+..
T Consensus 259 ------------~~~~~Rp----------~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 259 ------------VVGGLRP----------PIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred ------------HhcCCCC----------CCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 1111111 11123666788999999999999999999999999999887764
No 5
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-45 Score=400.04 Aligned_cols=258 Identities=33% Similarity=0.493 Sum_probs=214.1
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALV 781 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 781 (1009)
.+...+.||+|-||+||.|.|. ....||+|.++.. ....+.|.+|+++|++++|++||+++|+|... +..+||
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~-----~piyIV 279 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQ-----EPIYIV 279 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEc-CCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecC-----CceEEE
Confidence 4455688999999999999996 4458999999754 33467899999999999999999999999864 468999
Q ss_pred EeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccc
Q 047768 782 YEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 861 (1009)
Q Consensus 782 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~ 861 (1009)
||||+.|+|.+|++.... ..+...+.+.++.|||+||+||+++ ++|||||.++||||+++..|||+|||+|+.
T Consensus 280 tE~m~~GsLl~yLr~~~~----~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~ 352 (468)
T KOG0197|consen 280 TEYMPKGSLLDYLRTREG----GLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARL 352 (468)
T ss_pred EEecccCcHHHHhhhcCC----CccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccc
Confidence 999999999999998332 2488999999999999999999999 999999999999999999999999999995
Q ss_pred cCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhccc
Q 047768 862 LSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRALPE 940 (1009)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 940 (1009)
..+..+ ....+..-+..|.|||.+..+.|+.|||||||||+||||+| |+.||+.+... +.+
T Consensus 353 ~~d~~Y-------~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~-----ev~------ 414 (468)
T KOG0197|consen 353 IGDDEY-------TASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE-----EVL------ 414 (468)
T ss_pred cCCCce-------eecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH-----HHH------
Confidence 544322 12233445789999999999999999999999999999999 99999866433 222
Q ss_pred hhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 047768 941 KVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQNF 1004 (1009)
Q Consensus 941 ~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~~~ 1004 (1009)
+.++.- .+..++..|+.+++++|..||+.+|++|||++.+...++.+....
T Consensus 415 ---~~le~G----------yRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 415 ---ELLERG----------YRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred ---HHHhcc----------CcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence 112211 122345578899999999999999999999999999988877644
No 6
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=7e-45 Score=375.37 Aligned_cols=254 Identities=27% Similarity=0.342 Sum_probs=208.0
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCc-eEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVD-FKA 779 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~-~~~ 779 (1009)
+.+..+.||+|..|+||+++++.+++.+|+|++....+ ...+++.+|++++++.+||+||.++|.+... . ...
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~-----~~~is 154 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSN-----GEEIS 154 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeC-----CceEE
Confidence 44556889999999999999999999999999954432 3457899999999999999999999997653 3 689
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
++||||++|||++++...+. +++....+|+.++++||.|||+.+ +||||||||+|||++..|+|||||||.+
T Consensus 155 I~mEYMDgGSLd~~~k~~g~------i~E~~L~~ia~~VL~GL~YLh~~~--~IIHRDIKPsNlLvNskGeVKicDFGVS 226 (364)
T KOG0581|consen 155 ICMEYMDGGSLDDILKRVGR------IPEPVLGKIARAVLRGLSYLHEER--KIIHRDIKPSNLLVNSKGEVKICDFGVS 226 (364)
T ss_pred eehhhcCCCCHHHHHhhcCC------CCHHHHHHHHHHHHHHHHHHhhcc--CeeeccCCHHHeeeccCCCEEecccccc
Confidence 99999999999999987643 899999999999999999999632 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhcc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
+.+..+ ...+++||..|||||.+.+..|+.++||||||++++|+++|+.||...........+...
T Consensus 227 ~~lvnS----------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~---- 292 (364)
T KOG0581|consen 227 GILVNS----------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLC---- 292 (364)
T ss_pred HHhhhh----------hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHH----
Confidence 877643 334578999999999999999999999999999999999999999754222222222211
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
.+++..--..| ...+.+++.+++..|++.||.+||+++|+++.
T Consensus 293 ----~Iv~~ppP~lP----------~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 293 ----AIVDEPPPRLP----------EGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred ----HHhcCCCCCCC----------cccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 11111100001 11466778999999999999999999999764
No 7
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9.5e-45 Score=411.36 Aligned_cols=267 Identities=29% Similarity=0.459 Sum_probs=223.1
Q ss_pred ccCccCCcccccCCceEEEEEEe-----cCCeEEEEEEeeccccc-chHHHHHHHHHHHhcCCCCcceEEeeeeccccCC
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLH-----ENGMLVAVKVINLEQKG-GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKG 774 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 774 (1009)
.+....+.||+|+||+||+|+.. .+...||||.++..... ...+|++|++++..++|||||+++|+|...
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~---- 561 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREG---- 561 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccC----
Confidence 44556788999999999999875 24468999999866655 568999999999999999999999999865
Q ss_pred CceEEEEEeccCCCCHHHHHhccCCCCC--------ccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeC
Q 047768 775 VDFKALVYEYMQNGSLEEWLHQRDDQLG--------ICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLD 846 (1009)
Q Consensus 775 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~--------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~ 846 (1009)
+.+++|+|||.+|||.+||..+..... ..+++..+.+.||.|||.||+||.++ .+|||||.++|+||+
T Consensus 562 -~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVg 637 (774)
T KOG1026|consen 562 -DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVG 637 (774)
T ss_pred -CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceec
Confidence 789999999999999999987654321 23489999999999999999999999 999999999999999
Q ss_pred CCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCccccc
Q 047768 847 HDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFN 925 (1009)
Q Consensus 847 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~ 925 (1009)
++..|||+|||++|.+...+|+.... ...-+++|||||.+..++||+++||||||||+||+++ |+.||..+.+
T Consensus 638 e~l~VKIsDfGLsRdiYssDYYk~~~------~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn 711 (774)
T KOG1026|consen 638 ENLVVKISDFGLSRDIYSSDYYKVRG------NTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN 711 (774)
T ss_pred cceEEEecccccchhhhhhhhhcccC------CceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch
Confidence 99999999999999998887765331 1234689999999999999999999999999999999 9999986654
Q ss_pred CCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhh
Q 047768 926 EGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQNFL 1005 (1009)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~~~~ 1005 (1009)
+ +.+ ..+-+..+. ..++.|+.+++.+|..||+..|++||+++||-..|+...+..+
T Consensus 712 ~-----EVI--------e~i~~g~lL-----------~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~ 767 (774)
T KOG1026|consen 712 Q-----EVI--------ECIRAGQLL-----------SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASP 767 (774)
T ss_pred H-----HHH--------HHHHcCCcc-----------cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence 4 111 111222222 2345788999999999999999999999999999988766543
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-44 Score=373.55 Aligned_cols=202 Identities=31% Similarity=0.540 Sum_probs=182.1
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecc--cccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLE--QKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
..+|...+.||+|+||+||+|+++.++..||||.+... .....+.+..|+++++.++|||||++++++... +.
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~-----~~ 83 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDD-----DF 83 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecC-----Ce
Confidence 46788889999999999999999999999999999655 333456788999999999999999999997654 78
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCC------Cce
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHD------MVA 851 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~------~~~ 851 (1009)
.++|||||.+|+|.+|++.++. +++...+.++.|+|.|+++||++ +||||||||.|||++.. -.+
T Consensus 84 i~lVMEyC~gGDLs~yi~~~~~------l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~L 154 (429)
T KOG0595|consen 84 IYLVMEYCNGGDLSDYIRRRGR------LPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVL 154 (429)
T ss_pred EEEEEEeCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceE
Confidence 9999999999999999999864 99999999999999999999999 99999999999999765 568
Q ss_pred EEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccc
Q 047768 852 HVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMF 924 (1009)
Q Consensus 852 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~ 924 (1009)
||+|||+|+.+.+. ......+|++-|||||++..++|+.|+|+||.|+++|++++|+.||....
T Consensus 155 KIADFGfAR~L~~~---------~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t 218 (429)
T KOG0595|consen 155 KIADFGFARFLQPG---------SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET 218 (429)
T ss_pred EecccchhhhCCch---------hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence 99999999988754 33345789999999999999999999999999999999999999998543
No 9
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.5e-44 Score=368.96 Aligned_cols=253 Identities=25% Similarity=0.351 Sum_probs=203.9
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc-------chHHHHHHHHHHHhcCCCCcceEEeeeeccccC
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG-------GSKSFAAECEALRSIRHRNLIKIVTICSSIDFK 773 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 773 (1009)
+.|.+.+.||+|+||.|-+|..+.+|+.||||+++..... .....++|+++|++++|||||++.+++..
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~---- 247 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV---- 247 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeec----
Confidence 4678889999999999999999999999999999754321 12345799999999999999999999654
Q ss_pred CCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCC---Cc
Q 047768 774 GVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHD---MV 850 (1009)
Q Consensus 774 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~---~~ 850 (1009)
++..|+||||++||+|.+++-.++. +.+...+.+++|++.|+.|||++ ||+||||||+|||+..+ ..
T Consensus 248 -~ds~YmVlE~v~GGeLfd~vv~nk~------l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~l 317 (475)
T KOG0615|consen 248 -PDSSYMVLEYVEGGELFDKVVANKY------LREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCL 317 (475)
T ss_pred -CCceEEEEEEecCccHHHHHHhccc------cccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceE
Confidence 4778999999999999999988764 77888899999999999999999 99999999999999766 78
Q ss_pred eEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCC---CCcccchHHHHHHHHHHhCCCCCcccccCC
Q 047768 851 AHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEA---SMRGGVYSYGILLLEIFTRRRPTESMFNEG 927 (1009)
Q Consensus 851 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~DvwS~Gvvl~elltg~~p~~~~~~~~ 927 (1009)
+||+|||+|+..... ....+.+||+.|.|||++.+..+ ..+.|+||+||++|-+++|.+||.....+.
T Consensus 318 lKItDFGlAK~~g~~---------sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~ 388 (475)
T KOG0615|consen 318 LKITDFGLAKVSGEG---------SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP 388 (475)
T ss_pred EEecccchhhccccc---------eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc
Confidence 999999999987643 34456899999999999888654 347899999999999999999998643331
Q ss_pred ccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 928 LTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
.+.+.+ ....+...| ....+.-++..+++.+++..||++|||++|+++.
T Consensus 389 -sl~eQI-----------~~G~y~f~p--------~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 389 -SLKEQI-----------LKGRYAFGP--------LQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred -cHHHHH-----------hcCcccccC--------hhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 112111 111111111 1111334567899999999999999999999863
No 10
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-44 Score=399.14 Aligned_cols=271 Identities=29% Similarity=0.494 Sum_probs=225.8
Q ss_pred cCHHHHHHHhccC---------ccCCcccccCCceEEEEEEecCC---eEEEEEEeecccc-cchHHHHHHHHHHHhcCC
Q 047768 691 VSYKELSKATNEF---------SSSNTIGRGSFGFVYKGVLHENG---MLVAVKVINLEQK-GGSKSFAAECEALRSIRH 757 (1009)
Q Consensus 691 ~~~~~~~~~~~~~---------~~~~~lg~G~~g~V~~~~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h 757 (1009)
.+++|-.++..+| .+.++||.|.||+||+|+.+..| ..||||.++..-. +...+|..|+.+|.+++|
T Consensus 610 ~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdH 689 (996)
T KOG0196|consen 610 HTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDH 689 (996)
T ss_pred ccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCC
Confidence 4566655555444 45789999999999999998655 4699999986543 345689999999999999
Q ss_pred CCcceEEeeeeccccCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecC
Q 047768 758 RNLIKIVTICSSIDFKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGD 837 (1009)
Q Consensus 758 ~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrd 837 (1009)
|||+++.|+.+.. ...++|+|||++|+|..||++++.+ +++.+...+.++||.||.||.+. ++||||
T Consensus 690 PNIIrLEGVVTks-----~PvMIiTEyMENGsLDsFLR~~DGq-----ftviQLVgMLrGIAsGMkYLsdm---~YVHRD 756 (996)
T KOG0196|consen 690 PNIIRLEGVVTKS-----KPVMIITEYMENGSLDSFLRQNDGQ-----FTVIQLVGMLRGIASGMKYLSDM---NYVHRD 756 (996)
T ss_pred CcEEEEEEEEecC-----ceeEEEhhhhhCCcHHHHHhhcCCc-----eEeehHHHHHHHHHHHhHHHhhc---Cchhhh
Confidence 9999999997653 7889999999999999999999875 99999999999999999999999 999999
Q ss_pred CCCCceeeCCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-C
Q 047768 838 LKPSNVLLDHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-R 916 (1009)
Q Consensus 838 lk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g 916 (1009)
|.++||||+.+..+|++|||++|.+.+.+ +......+-.-+.+|.|||.+....+|.++||||||||+||.++ |
T Consensus 757 LAARNILVNsnLvCKVsDFGLSRvledd~-----~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyG 831 (996)
T KOG0196|consen 757 LAARNILVNSNLVCKVSDFGLSRVLEDDP-----EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYG 831 (996)
T ss_pred hhhhheeeccceEEEeccccceeecccCC-----CccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccC
Confidence 99999999999999999999999886653 12233334445789999999999999999999999999999998 9
Q ss_pred CCCCcccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 917 RRPTESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 917 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
.+||++|.+.+ +...++..+ +.+.+.+|+.++.++|..||+.|-.+||+++|++..
T Consensus 832 ERPYWdmSNQd--------------VIkaIe~gy----------RLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 832 ERPYWDMSNQD--------------VIKAIEQGY----------RLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred CCcccccchHH--------------HHHHHHhcc----------CCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 99999886552 111111111 123445899999999999999999999999999999
Q ss_pred HHHHHHh
Q 047768 997 LCHARQN 1003 (1009)
Q Consensus 997 L~~i~~~ 1003 (1009)
|.++.++
T Consensus 888 lDklIrn 894 (996)
T KOG0196|consen 888 LDKLIRN 894 (996)
T ss_pred HHHHhcC
Confidence 9887653
No 11
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.4e-43 Score=380.10 Aligned_cols=248 Identities=25% Similarity=0.375 Sum_probs=208.1
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecc---cccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLE---QKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
.+|...+.||+|||+.||++++..+|..||+|++... .....+.+.+||++.++++|||||+++++ |++..+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~-----FEDs~n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHF-----FEDSNN 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeE-----eecCCc
Confidence 5799999999999999999999889999999999643 23345778999999999999999999999 455689
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.|+|+|+|++++|..+++.+. ++++.++..+.+||+.|+.|||++ +|+|||||..|++++++.+|||+|||
T Consensus 93 VYivLELC~~~sL~el~Krrk------~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFG 163 (592)
T KOG0575|consen 93 VYIVLELCHRGSLMELLKRRK------PLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFG 163 (592)
T ss_pred eEEEEEecCCccHHHHHHhcC------CCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccc
Confidence 999999999999999999655 399999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
+|..+.... .+..+.+|||.|+|||++....++..+||||+|||+|-|+.|++||+.. .+.+.....
T Consensus 164 LAt~le~~~--------Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk-----~vkety~~I 230 (592)
T KOG0575|consen 164 LATQLEYDG--------ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK-----TVKETYNKI 230 (592)
T ss_pred eeeeecCcc--------cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc-----hHHHHHHHH
Confidence 999876431 3455689999999999999999999999999999999999999999742 122222111
Q ss_pred ccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 938 LPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 938 ~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
. ..+..-+. ....+..+++.+.++.+|.+|||+++|++
T Consensus 231 k---~~~Y~~P~-----------------~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 231 K---LNEYSMPS-----------------HLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred H---hcCccccc-----------------ccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0 01111000 11224569999999999999999999975
No 12
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=3.6e-46 Score=383.11 Aligned_cols=475 Identities=28% Similarity=0.411 Sum_probs=342.8
Q ss_pred eEEEEEeecCCcccccCccccCCCCCCeeeecCCcCCccCCccccCccccccccccccccCCCCCCCCcCCCcCcEEecc
Q 047768 71 RVTKLDLRNQSIGGILSPYVGNLSFLRYINIADNDFHGEIPDRIGNLFRLETLVLANNSFSGRIPTNLSHCSKLITFSAH 150 (1009)
Q Consensus 71 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~ 150 (1009)
....+++++|.+.. +.+.+.+|..|.+|++++|+++ ..|++++.+..++.|+.|+|+++ .+|..++.+.+|+.|+++
T Consensus 46 ~l~~lils~N~l~~-l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s 122 (565)
T KOG0472|consen 46 DLQKLILSHNDLEV-LREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCS 122 (565)
T ss_pred chhhhhhccCchhh-ccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcc
Confidence 34556666666643 3345666777777777777777 67777777777777777777776 566666666666555555
Q ss_pred cccccCCCchHHhhhccCCcCeEeecCccCCCCCCcccCCccccceeecccCcccCCCCcccccccccccccccCccCCC
Q 047768 151 RNNLVGEIPEELISRRLFNLQGLSVGDNQLTGQLPASIGNLSALRVIDIRTNRLWGKIPITLSQLTSLAYLHVGDNHFSG 230 (1009)
Q Consensus 151 ~n~l~~~~p~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 230 (1009)
+|.+ . .+|+.++.+..|..|+..+|+++ ..|+.+..+.+|..|++.+|++.
T Consensus 123 ~n~~--------------------------~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~- 173 (565)
T KOG0472|consen 123 SNEL--------------------------K-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLK- 173 (565)
T ss_pred ccce--------------------------e-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchh-
Confidence 5444 3 56667777788888888888884 66777778888888888888887
Q ss_pred CCCCcccCCChHHHHHhhCCccCCCCChhhccCCCcccceeccccccCCCCCCCcCcccccccccccccccccccccccc
Q 047768 231 TIPPSVYNISSLVEIYLYGNRFTGSLPIEIGKNLPNLRNFVIYTNNFTGSLPDSFSNASNLEVLHLAENQFRGQVSINFN 310 (1009)
Q Consensus 231 ~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~f~ 310 (1009)
.+|+..-++..|++||+..|-++ .+|.+++ ++.+|..|+|.+|+|. ..| .|.+++.|++|+++.|+|+.++.....
T Consensus 174 ~l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg-~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~ 249 (565)
T KOG0472|consen 174 ALPENHIAMKRLKHLDCNSNLLE-TLPPELG-GLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEMLPAEHLK 249 (565)
T ss_pred hCCHHHHHHHHHHhcccchhhhh-cCChhhc-chhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHhhHHHHhc
Confidence 45555555888888888888887 8888776 4888888888888887 455 788888888888888888877777777
Q ss_pred cccccccccccccccCCCCCCCcchhhhcccccccceEEccCCCCCCcCchhhhhhcccceEEEcCCCccccCCCccccC
Q 047768 311 GLKDLSMLGLATNFLGNGAANDLDFVDLLTNCTKLQYLYLADNGFGGVLPHSIANLSTALIDFNLGKNQIYGTIPPGIAN 390 (1009)
Q Consensus 311 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~ 390 (1009)
.+.+|..|||..|.+...+ +.+..+.+|++||+|+|.|+ .+|.+++++ .|+.|.+.+|.+.. +...+-+
T Consensus 250 ~L~~l~vLDLRdNklke~P-------de~clLrsL~rLDlSNN~is-~Lp~sLgnl--hL~~L~leGNPlrT-iRr~ii~ 318 (565)
T KOG0472|consen 250 HLNSLLVLDLRDNKLKEVP-------DEICLLRSLERLDLSNNDIS-SLPYSLGNL--HLKFLALEGNPLRT-IRREIIS 318 (565)
T ss_pred ccccceeeeccccccccCc-------hHHHHhhhhhhhcccCCccc-cCCcccccc--eeeehhhcCCchHH-HHHHHHc
Confidence 7777777777777776543 44566677777777777776 556666666 56777777776642 1111110
Q ss_pred ------cCccCE----EEccCCCC----CCCCCC----CcCCcccccceecccccccCCCCcccccccc---cccccccC
Q 047768 391 ------LVNLNS----LRMEANRL----TGTIPH----VIGELKNLQLLHLHANFLQGTIPSSLGNLTL---LTYLSFGA 449 (1009)
Q Consensus 391 ------l~~L~~----L~L~~N~l----~~~~p~----~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~L~~ 449 (1009)
++.|+. =.++.-+= ++..|. ....+.+.++|++++=+++ .+|+....-.. .+..+++.
T Consensus 319 ~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~Vnfsk 397 (565)
T KOG0472|consen 319 KGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSK 397 (565)
T ss_pred ccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEeccc
Confidence 111111 00111000 001111 1224567888888888888 56665444333 77888999
Q ss_pred cccccccCCCCCCCCCccccccCCCCccCCCchhhhhhccceeeEecCCCccCCCCCCCccCCCCCCeeeccccccCCCc
Q 047768 450 NNLQGNIPFSLGNCKNLMFFFAPRNKLTGALPQQILEITTLSLSLDLSDNLLNGSLPLGVGNLKSLVRLGIARNQFSGQI 529 (1009)
Q Consensus 450 N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 529 (1009)
|++. ++|..+..+..+.+.-+.+|+..+-+|..+..+..+.. |+|++|-+. .+|.+++.+..|+.||+|.|+|. .+
T Consensus 398 NqL~-elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~-L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~l 473 (565)
T KOG0472|consen 398 NQLC-ELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTF-LDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-ML 473 (565)
T ss_pred chHh-hhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhccee-eecccchhh-hcchhhhhhhhhheecccccccc-cc
Confidence 9998 78888888887766554444444477777777666664 999999888 79999999999999999999998 89
Q ss_pred cccccCCCCccEEEecCcccccccccccccccccceEcCCCcccccccccccccccccCceecccccCc
Q 047768 530 PVTLGACTSLEYVELQGNSFSGTIPQSLSSLTSIKELDLSQNNFSGQIPKYLENLSFLQYLNLSYNHFE 598 (1009)
Q Consensus 530 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 598 (1009)
|..+..+..||.+-.++|++....|+.+.++.+|++|||.+|.+. .+|+.++++++|++|++++|+|.
T Consensus 474 P~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 474 PECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 999999899999999999999777777999999999999999998 89999999999999999999997
No 13
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.6e-44 Score=349.98 Aligned_cols=263 Identities=24% Similarity=0.352 Sum_probs=210.5
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
..+|.+.++||+|.||+||+++...+|..||.|.++.... .....+..|+.+|++++|||||+++++-. .++...
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f---~~~~ev 94 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSF---IEDNEV 94 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhh---hccchh
Confidence 3468888999999999999999999999999999975433 23457889999999999999999998532 223345
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCC--ceecCCCCCceeeCCCCceEEec
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPP--IVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
.++|||||.+|+|..+++..+.+. ..+++..+|+++.|++.||.++|++. ++ |+||||||.||+++++|.||++|
T Consensus 95 lnivmE~c~~GDLsqmIk~~K~qk--r~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGD 171 (375)
T KOG0591|consen 95 LNIVMELCDAGDLSQMIKHFKKQK--RLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGD 171 (375)
T ss_pred hHHHHHhhcccCHHHHHHHHHhcc--ccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeecc
Confidence 889999999999999998755442 34899999999999999999999942 24 89999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 935 (1009)
||+++.+.... ......+|||.||+||.+.+..|+.++||||+||++|||..-+.||..- .+.....
T Consensus 172 fGL~r~l~s~~--------tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L~~ 238 (375)
T KOG0591|consen 172 FGLGRFLSSKT--------TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSLCK 238 (375)
T ss_pred chhHhHhcchh--------HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHHHH
Confidence 99999887542 3445689999999999999999999999999999999999999999742 2332222
Q ss_pred HhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 047768 936 RALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCH 999 (1009)
Q Consensus 936 ~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~ 999 (1009)
+.- .....+. ..+.+...+.+++..|+..||+.||+...++..+..
T Consensus 239 KI~--------qgd~~~~----------p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 239 KIE--------QGDYPPL----------PDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred HHH--------cCCCCCC----------cHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 111 1111111 123455678899999999999999986555555443
No 14
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.4e-42 Score=345.03 Aligned_cols=271 Identities=21% Similarity=0.300 Sum_probs=204.7
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
+.|+...++|+|+||+||+++++++|+.||||+|....+ .-.+-..+|++++++++|+|+|.++.+|.. ....
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr-----krkl 76 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRR-----KRKL 76 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHh-----ccee
Confidence 357777899999999999999999999999999954332 224667899999999999999999998544 4788
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
++|+|||+. ++.+-+++...+ ++...++++++|++.|+.|+|++ ++|||||||+||||+.+|.+|+||||+
T Consensus 77 hLVFE~~dh-TvL~eLe~~p~G-----~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGF 147 (396)
T KOG0593|consen 77 HLVFEYCDH-TVLHELERYPNG-----VPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGF 147 (396)
T ss_pred EEEeeecch-HHHHHHHhccCC-----CCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchh
Confidence 999999977 555556666554 89999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHH-
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKR- 936 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~- 936 (1009)
|+.+... ....+.++.|.+|+|||.+.+ .+|+..+||||.||++.||++|.+-|...++- +.+..+...
T Consensus 148 AR~L~~p--------gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDi-DQLy~I~ktL 218 (396)
T KOG0593|consen 148 ARTLSAP--------GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDI-DQLYLIRKTL 218 (396)
T ss_pred hHhhcCC--------cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchH-HHHHHHHHHH
Confidence 9988732 123345678999999999888 78999999999999999999999887653322 222222211
Q ss_pred -hccchhhhccCCC------CCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 937 -ALPEKVMEIVDPS------LLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 937 -~~~~~~~~~~d~~------l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.+.+.-.+++... ..+.++.+...+ ..-......+++++..|++.||++|++.+|++.
T Consensus 219 G~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe-~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 219 GNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLE-RKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred cccCHHHHHHhccCCceeeeecCCCCCccchh-hhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 1222222222221 111111111100 000112235789999999999999999999874
No 15
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-42 Score=372.99 Aligned_cols=267 Identities=25% Similarity=0.392 Sum_probs=213.5
Q ss_pred HHHHHHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc--chHHHHHHHHHHHhcCCCCcceEEeeeeccc
Q 047768 694 KELSKATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG--GSKSFAAECEALRSIRHRNLIKIVTICSSID 771 (1009)
Q Consensus 694 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 771 (1009)
+++....+++.+.++||+|+||+||+|+|.. .||||+++..... ..+.|+.|+.++++-+|.||+-+.|||...
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p- 460 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP- 460 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC-
Confidence 5555666778888999999999999999973 4999999766433 346899999999999999999999998763
Q ss_pred cCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCce
Q 047768 772 FKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 851 (1009)
Q Consensus 772 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~ 851 (1009)
...+|+.+|+|-+|+.+++-.+.. ++..+.+.||+|||+||.|||.+ +|||||||..||++.+++.|
T Consensus 461 -----~~AIiTqwCeGsSLY~hlHv~etk-----fdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kV 527 (678)
T KOG0193|consen 461 -----PLAIITQWCEGSSLYTHLHVQETK-----FDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKV 527 (678)
T ss_pred -----ceeeeehhccCchhhhhccchhhh-----hhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcE
Confidence 348999999999999999977654 89999999999999999999999 99999999999999999999
Q ss_pred EEeccccccccCCCCCCCccccCCccccccccccccCccccCC---CCCCCcccchHHHHHHHHHHhCCCCCcccccCCc
Q 047768 852 HVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG---GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGL 928 (1009)
Q Consensus 852 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~ 928 (1009)
||+|||++..-......... ....|...|||||++.. .+|++++||||||+|+|||+||..||... ..+
T Consensus 528 kIgDFGLatvk~~w~g~~q~------~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~-~~d- 599 (678)
T KOG0193|consen 528 KIGDFGLATVKTRWSGEQQL------EQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQ-NRD- 599 (678)
T ss_pred EEecccceeeeeeecccccc------CCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCC-Chh-
Confidence 99999999865543221111 12347789999999765 46899999999999999999999999722 111
Q ss_pred cHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 047768 929 TLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQN 1003 (1009)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~~ 1003 (1009)
.++....+. .+.++.. .....|++++.+++..||..++++||.+.+++.+|+++...
T Consensus 600 ---qIifmVGrG--------~l~pd~s-------~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 600 ---QIIFMVGRG--------YLMPDLS-------KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred ---heEEEeccc--------ccCccch-------hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 111111111 1111110 11236788899999999999999999999999999887664
No 16
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-42 Score=372.57 Aligned_cols=366 Identities=21% Similarity=0.236 Sum_probs=316.6
Q ss_pred CCeeeecCCcCCccCCccccCccccccccccccccCCCCCCCCcCCCcCcEEecccccccCCCchHHhhhccCCcCeEee
Q 047768 96 LRYINIADNDFHGEIPDRIGNLFRLETLVLANNSFSGRIPTNLSHCSKLITFSAHRNNLVGEIPEELISRRLFNLQGLSV 175 (1009)
Q Consensus 96 L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L 175 (1009)
-+.||+|+|.++..-+..|.++++|+.++|..|.++ .||...+...+|+.|+|.+|.++..-.+.+ ..+..|+.|||
T Consensus 80 t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L--~~l~alrslDL 156 (873)
T KOG4194|consen 80 TQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEEL--SALPALRSLDL 156 (873)
T ss_pred eeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHH--HhHhhhhhhhh
Confidence 467899999988777888889999999999999888 788877777779999999998886666666 56788899999
Q ss_pred cCccCCCCCCcccCCccccceeecccCcccCCCCcccccccccccccccCccCCCCCCCcccCCChHHHHHhhCCccCCC
Q 047768 176 GDNQLTGQLPASIGNLSALRVIDIRTNRLWGKIPITLSQLTSLAYLHVGDNHFSGTIPPSVYNISSLVEIYLYGNRFTGS 255 (1009)
Q Consensus 176 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 255 (1009)
|.|.|+.+.-.+|..-.++++|+|++|+|+...-+.|..+.+|..|.|++|+++...+..|.+|++|+.|+|..|+|. .
T Consensus 157 SrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~ir-i 235 (873)
T KOG4194|consen 157 SRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIR-I 235 (873)
T ss_pred hhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhcccccee-e
Confidence 999998666667877788999999999998888889999999999999999998544556777999999999999987 7
Q ss_pred CChhhccCCCcccceeccccccCCCCCCCcCcccccccccccccccccccccccccccccccccccccccCCCCCCCcch
Q 047768 256 LPIEIGKNLPNLRNFVIYTNNFTGSLPDSFSNASNLEVLHLAENQFRGQVSINFNGLKDLSMLGLATNFLGNGAANDLDF 335 (1009)
Q Consensus 256 ip~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~ 335 (1009)
+....|.+|++|+.|.|..|.|.......|..+.++++|+|+.|+++....+.+-+|+.|+.|+||+|.|..+....
T Consensus 236 ve~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~--- 312 (873)
T KOG4194|consen 236 VEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDS--- 312 (873)
T ss_pred ehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecch---
Confidence 77778889999999999999999888899999999999999999999998889999999999999999998887744
Q ss_pred hhhcccccccceEEccCCCCCCcCchhhhhhcccceEEEcCCCccccCCCccccCcCccCEEEccCCCCCCCCCC---Cc
Q 047768 336 VDLLTNCTKLQYLYLADNGFGGVLPHSIANLSTALIDFNLGKNQIYGTIPPGIANLVNLNSLRMEANRLTGTIPH---VI 412 (1009)
Q Consensus 336 ~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~---~~ 412 (1009)
+..+++|+.|+|++|+|+...+.+|..+ ..|++|+|++|.|+..-...|..+++|+.|||++|.|+..+.+ .|
T Consensus 313 ---WsftqkL~~LdLs~N~i~~l~~~sf~~L-~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f 388 (873)
T KOG4194|consen 313 ---WSFTQKLKELDLSSNRITRLDEGSFRVL-SQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAF 388 (873)
T ss_pred ---hhhcccceeEeccccccccCChhHHHHH-HHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhh
Confidence 4456899999999999998888888888 6799999999999988888899999999999999999877655 57
Q ss_pred CCcccccceecccccccCCCCcccccccccccccccCcccccccCCCCCCCCCccccccCC
Q 047768 413 GELKNLQLLHLHANFLQGTIPSSLGNLTLLTYLSFGANNLQGNIPFSLGNCKNLMFFFAPR 473 (1009)
Q Consensus 413 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~ 473 (1009)
.+|++|+.|+|.+|+|..+...+|.+++.|++|||.+|.|..+-|.+|..+ .|+.|.+..
T Consensus 389 ~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nS 448 (873)
T KOG4194|consen 389 NGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNS 448 (873)
T ss_pred ccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcc
Confidence 889999999999999997777799999999999999999998999999988 888776654
No 17
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-41 Score=395.84 Aligned_cols=267 Identities=25% Similarity=0.394 Sum_probs=217.7
Q ss_pred cCccCCcccccCCceEEEEEEecCC-----eEEEEEEeecc-cccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCC
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENG-----MLVAVKVINLE-QKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 775 (1009)
..+..+.||+|+||+||.|...+.. ..||||.++.. +.+...+|.+|..+|++++|||||+++|+|.. .
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~-----~ 767 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD-----S 767 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC-----C
Confidence 4455678999999999999987432 34899988544 34456789999999999999999999999865 3
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCC-CCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEe
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQ-LGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 854 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~ 854 (1009)
...++++|||++|+|.+||++.+.. .....++..+...++.|||+|+.||+++ ++|||||.++|+|+++..+|||+
T Consensus 768 ~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIa 844 (1025)
T KOG1095|consen 768 GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIA 844 (1025)
T ss_pred CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEc
Confidence 6779999999999999999986322 2234699999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHH
Q 047768 855 DFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEF 933 (1009)
Q Consensus 855 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~ 933 (1009)
|||+|+++....+++.... ..-+..|||||.+.++.|+.|+|||||||++||++| |..||....+.+ .
T Consensus 845 DFGlArDiy~~~yyr~~~~------a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~-----v 913 (1025)
T KOG1095|consen 845 DFGLARDIYDKDYYRKHGE------AMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE-----V 913 (1025)
T ss_pred ccchhHhhhhchheeccCc------cccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH-----H
Confidence 9999998877665443221 123578999999999999999999999999999999 999998654331 1
Q ss_pred HHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhc
Q 047768 934 AKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQNFLG 1006 (1009)
Q Consensus 934 ~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~~~~~ 1006 (1009)
... +.... +...+..|++.++++|.+||+.+|++||++..+++.+..+...+..
T Consensus 914 ~~~--------~~~gg-----------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~ 967 (1025)
T KOG1095|consen 914 LLD--------VLEGG-----------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALG 967 (1025)
T ss_pred HHH--------HHhCC-----------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhcc
Confidence 110 11111 1223347888999999999999999999999999999998877654
No 18
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=1.1e-44 Score=372.16 Aligned_cols=460 Identities=26% Similarity=0.370 Sum_probs=333.6
Q ss_pred CeEEEEEeecCCcccccCccccCCCCCCeeeecCCcCCccCCccccCccccccccccccccCCCCCCCCcCCCcCcEEec
Q 047768 70 QRVTKLDLRNQSIGGILSPYVGNLSFLRYINIADNDFHGEIPDRIGNLFRLETLVLANNSFSGRIPTNLSHCSKLITFSA 149 (1009)
Q Consensus 70 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l 149 (1009)
...+.|++.+|.++ ..|++++.+..++.|+.|+|+++ ++|++++.+.+|+.||.++|.+. .+|++++.+..|..++.
T Consensus 68 ~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~ 144 (565)
T KOG0472|consen 68 ACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDA 144 (565)
T ss_pred cceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhc
Confidence 35788999999885 57889999999999999999999 99999999999999999999998 78889988888888888
Q ss_pred ccccccCCCchHHhhhccCCcCeEeecCccCCCCCCcccCCccccceeecccCcccCCCCcccccccccccccccCccCC
Q 047768 150 HRNNLVGEIPEELISRRLFNLQGLSVGDNQLTGQLPASIGNLSALRVIDIRTNRLWGKIPITLSQLTSLAYLHVGDNHFS 229 (1009)
Q Consensus 150 ~~n~l~~~~p~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 229 (1009)
.+|+++ ..|+.++ .+.+|..|++.+|.++...|+.+ +++.|+.||...|-+ +.+|..++.+.+|..|+|.+|+|.
T Consensus 145 ~~N~i~-slp~~~~--~~~~l~~l~~~~n~l~~l~~~~i-~m~~L~~ld~~~N~L-~tlP~~lg~l~~L~~LyL~~Nki~ 219 (565)
T KOG0472|consen 145 TNNQIS-SLPEDMV--NLSKLSKLDLEGNKLKALPENHI-AMKRLKHLDCNSNLL-ETLPPELGGLESLELLYLRRNKIR 219 (565)
T ss_pred cccccc-cCchHHH--HHHHHHHhhccccchhhCCHHHH-HHHHHHhcccchhhh-hcCChhhcchhhhHHHHhhhcccc
Confidence 777776 3343332 23444455555555553222222 255555555555544 344444555555555555555554
Q ss_pred CCCCCcccCCChHHHHHhhCCccCCCCChhhccCCCcccceeccccccCCCCCCCcCccccccccccccccccccccccc
Q 047768 230 GTIPPSVYNISSLVEIYLYGNRFTGSLPIEIGKNLPNLRNFVIYTNNFTGSLPDSFSNASNLEVLHLAENQFRGQVSINF 309 (1009)
Q Consensus 230 ~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~f 309 (1009)
.+| .|.+++.|++|+++.|+|. .+|++ ...++++|.+|||.+|+++. .|..+
T Consensus 220 -~lP-ef~gcs~L~Elh~g~N~i~-~lpae------------------------~~~~L~~l~vLDLRdNklke-~Pde~ 271 (565)
T KOG0472|consen 220 -FLP-EFPGCSLLKELHVGENQIE-MLPAE------------------------HLKHLNSLLVLDLRDNKLKE-VPDEI 271 (565)
T ss_pred -cCC-CCCccHHHHHHHhcccHHH-hhHHH------------------------Hhcccccceeeecccccccc-CchHH
Confidence 344 4444555555555555444 34433 33478899999999999985 45567
Q ss_pred ccccccccccccccccCCCCCCCcchhhhcccccccceEEccCCCCCCcCchhhhhhc--ccceEE-------EcCCCcc
Q 047768 310 NGLKDLSMLGLATNFLGNGAANDLDFVDLLTNCTKLQYLYLADNGFGGVLPHSIANLS--TALIDF-------NLGKNQI 380 (1009)
Q Consensus 310 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~~L~~L-------~L~~N~l 380 (1009)
.-+++|..||+|+|.|+..+. .++++ .|+.|-+.+|.+..+ -..+-+-. .-|++| .++.-+=
T Consensus 272 clLrsL~rLDlSNN~is~Lp~-------sLgnl-hL~~L~leGNPlrTi-Rr~ii~~gT~~vLKyLrs~~~~dglS~se~ 342 (565)
T KOG0472|consen 272 CLLRSLERLDLSNNDISSLPY-------SLGNL-HLKFLALEGNPLRTI-RREIISKGTQEVLKYLRSKIKDDGLSQSEG 342 (565)
T ss_pred HHhhhhhhhcccCCccccCCc-------ccccc-eeeehhhcCCchHHH-HHHHHcccHHHHHHHHHHhhccCCCCCCcc
Confidence 889999999999999997664 57888 899999999998732 22211110 011111 1111110
Q ss_pred ----ccC----CCccccCcCccCEEEccCCCCCCCCCCCcCCccc---ccceecccccccCCCCcccccccccccccccC
Q 047768 381 ----YGT----IPPGIANLVNLNSLRMEANRLTGTIPHVIGELKN---LQLLHLHANFLQGTIPSSLGNLTLLTYLSFGA 449 (1009)
Q Consensus 381 ----~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 449 (1009)
++. .......+.+.+.|+++.-+++ .+|+..+.-.+ ....+++.|++. ++|..+..+..+.+.-+.+
T Consensus 343 ~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~ls 420 (565)
T KOG0472|consen 343 GTETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLS 420 (565)
T ss_pred cccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhh
Confidence 001 1122344677899999999999 66665544444 788999999999 8898888888766654444
Q ss_pred cccccccCCCCCCCCCccccccCCCCccCCCchhhhhhccceeeEecCCCccCCCCCCCccCCCCCCeeeccccccCCCc
Q 047768 450 NNLQGNIPFSLGNCKNLMFFFAPRNKLTGALPQQILEITTLSLSLDLSDNLLNGSLPLGVGNLKSLVRLGIARNQFSGQI 529 (1009)
Q Consensus 450 N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 529 (1009)
|+..+.+|..++.+++|..|++++|.+- .+|..++....+ ..||+|.|+|. .+|..+..+..|+.+-.++|++....
T Consensus 421 nn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~L-q~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd 497 (565)
T KOG0472|consen 421 NNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRL-QTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVD 497 (565)
T ss_pred cCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhh-heecccccccc-cchHHHhhHHHHHHHHhccccccccC
Confidence 4444589999999999999999999887 889888887774 46999999998 78988888888988888889998666
Q ss_pred cccccCCCCccEEEecCcccccccccccccccccceEcCCCccccccccccc
Q 047768 530 PVTLGACTSLEYVELQGNSFSGTIPQSLSSLTSIKELDLSQNNFSGQIPKYL 581 (1009)
Q Consensus 530 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 581 (1009)
|..+.+|.+|..|||.+|.+. .+|..++++++|++|+|++|.|. ..|..+
T Consensus 498 ~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr-~Pr~~i 547 (565)
T KOG0472|consen 498 PSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR-QPRHQI 547 (565)
T ss_pred hHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC-CCHHHH
Confidence 666999999999999999999 89999999999999999999998 444433
No 19
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.8e-41 Score=355.33 Aligned_cols=273 Identities=25% Similarity=0.328 Sum_probs=210.1
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc--ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ--KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
+.|+..++||+|+||.||+|++..+|+.||+|++..+. .+......+||.+|++++||||+++.+..++. .....
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~---~~~si 193 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK---LSGSI 193 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec---CCceE
Confidence 45677789999999999999999999999999997664 44567788999999999999999999997753 34678
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
|+|+|||++ ||.-++....- .+++.+++.++.|++.||+|+|++ +|+|||||.+|||||.+|.+||+|||+
T Consensus 194 YlVFeYMdh-DL~GLl~~p~v-----kft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGL 264 (560)
T KOG0600|consen 194 YLVFEYMDH-DLSGLLSSPGV-----KFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGL 264 (560)
T ss_pred EEEEecccc-hhhhhhcCCCc-----ccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccc
Confidence 999999977 89888877543 399999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
|+++..... ...+..+-|..|+|||.+.+. .|+.+.|+||.|||+.||++|++.|..- .+..++..+..-.
T Consensus 265 Ar~y~~~~~-------~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~-tEveQl~kIfklc 336 (560)
T KOG0600|consen 265 ARFYTPSGS-------APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGR-TEVEQLHKIFKLC 336 (560)
T ss_pred eeeccCCCC-------cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCc-cHHHHHHHHHHHh
Confidence 998876432 224456789999999998885 6899999999999999999999987642 1222233332222
Q ss_pred ccc--hhhh---ccCC-CCCC-hhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 938 LPE--KVME---IVDP-SLLP-LEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 938 ~~~--~~~~---~~d~-~l~~-~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
... +... +... .+.+ .+..|...+. ........++++..++..||++|.||.++++
T Consensus 337 GSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~--~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 337 GSPTEDYWPVSKLPHATIFKPQQPYKRRLRET--FKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred CCCChhccccccCCcccccCCCCcccchHHHH--hccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 111 1111 1100 0111 1111111111 2233356789999999999999999999875
No 20
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1e-42 Score=372.71 Aligned_cols=366 Identities=20% Similarity=0.207 Sum_probs=205.4
Q ss_pred CeEeecCccCCCCCCcccCCccccceeecccCcccCCCCcccccccccccccccCccCCCCCCCcccCCChHHHHHhhCC
Q 047768 171 QGLSVGDNQLTGQLPASIGNLSALRVIDIRTNRLWGKIPITLSQLTSLAYLHVGDNHFSGTIPPSVYNISSLVEIYLYGN 250 (1009)
Q Consensus 171 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 250 (1009)
+.|++++|.++.+-+..|.++++|+.++|.+|.++ .+|.......+|+.|+|.+|.|+..-.+++..++.|+.||||.|
T Consensus 81 ~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN 159 (873)
T KOG4194|consen 81 QTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRN 159 (873)
T ss_pred eeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhc
Confidence 34555555555444555555555555555555552 44444444444555555555555444455555555666666666
Q ss_pred ccCCCCChhhccCCCcccceeccccccCCCCCCCcCcccccccccccccccccccccccccccccccccccccccCCCCC
Q 047768 251 RFTGSLPIEIGKNLPNLRNFVIYTNNFTGSLPDSFSNASNLEVLHLAENQFRGQVSINFNGLKDLSMLGLATNFLGNGAA 330 (1009)
Q Consensus 251 ~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~ 330 (1009)
.|+ .||..-|..-.++++|+|++|.|+.+-...|.++.+|.+|.|++|+++.++...|..|++|+.|+|..|+|.....
T Consensus 160 ~is-~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ 238 (873)
T KOG4194|consen 160 LIS-EIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEG 238 (873)
T ss_pred hhh-cccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehh
Confidence 655 5555555545556666666666666656666666666666666666666666666666666666666666554432
Q ss_pred CCcchhhhcccccccceEEccCCCCCCcCchhhhhhcccceEEEcCCCccccCCCccccCcCccCEEEccCCCCCCCCCC
Q 047768 331 NDLDFVDLLTNCTKLQYLYLADNGFGGVLPHSIANLSTALIDFNLGKNQIYGTIPPGIANLVNLNSLRMEANRLTGTIPH 410 (1009)
Q Consensus 331 ~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 410 (1009)
-.|.++++|+.|.|..|+|...-...|..+ ..+++|+|+.|+++..-..++.+|+.|+.|+||+|.|..+-++
T Consensus 239 ------ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l-~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d 311 (873)
T KOG4194|consen 239 ------LTFQGLPSLQNLKLQRNDISKLDDGAFYGL-EKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHID 311 (873)
T ss_pred ------hhhcCchhhhhhhhhhcCcccccCcceeee-cccceeecccchhhhhhcccccccchhhhhccchhhhheeecc
Confidence 234556666666666666654444444444 4455566666666555566677777777777777777777777
Q ss_pred CcCCcccccceecccccccCCCCcccccccccccccccCcccccccCCCCCCCCCccccccCCCCccCCCchhhhhhccc
Q 047768 411 VIGELKNLQLLHLHANFLQGTIPSSLGNLTLLTYLSFGANNLQGNIPFSLGNCKNLMFFFAPRNKLTGALPQQILEITTL 490 (1009)
Q Consensus 411 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~ 490 (1009)
.+.-.++|++|+|++|+|+...+.+|..|..|++|+|++|.+...-...|..+++|+.|++++|.++..+.+..
T Consensus 312 ~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa------ 385 (873)
T KOG4194|consen 312 SWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAA------ 385 (873)
T ss_pred hhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecch------
Confidence 77777777777777777776666677777777777777777764333344444444443333333332211100
Q ss_pred eeeEecCCCccCCCCCCCccCCCCCCeeeccccccCCCccccccCCCCccEEEecCcccccccccccccccccceEcC
Q 047768 491 SLSLDLSDNLLNGSLPLGVGNLKSLVRLGIARNQFSGQIPVTLGACTSLEYVELQGNSFSGTIPQSLSSLTSIKELDL 568 (1009)
Q Consensus 491 ~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 568 (1009)
..|..|++|+.|+|.+|+|..+.-.+|.++.+||.|||.+|.|..+-|.+|..+ .|++|-+
T Consensus 386 ----------------~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~ 446 (873)
T KOG4194|consen 386 ----------------VAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVM 446 (873)
T ss_pred ----------------hhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhh
Confidence 113334445555555555543333344444444444444444444444444444 4444444
No 21
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-40 Score=343.96 Aligned_cols=272 Identities=24% Similarity=0.376 Sum_probs=218.8
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhc--CCCCcceEEeeeeccccCCCceE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSI--RHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
++....+.||+|+||+||+|.|+ |..||||+|...+ .+.+.+|.++.+.+ +|+||+.+++.-... -....++
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~-~gs~TQL 284 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKD-NGSWTQL 284 (513)
T ss_pred heeEEEEEecCccccceeecccc--CCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccC-CCceEEE
Confidence 56677889999999999999997 8899999996443 46778889988875 999999999874332 2345678
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhc-----CCCCceecCCCCCceeeCCCCceEE
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHH-----CQPPIVHGDLKPSNVLLDHDMVAHV 853 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-----~~~~ivHrdlk~~Nill~~~~~~kl 853 (1009)
++|++|.+.|||+|||.+.. ++....++++..+|.||+|||.. .+|.|.|||||+.||||..++.+.|
T Consensus 285 wLvTdYHe~GSL~DyL~r~t-------v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~I 357 (513)
T KOG2052|consen 285 WLVTDYHEHGSLYDYLNRNT-------VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 357 (513)
T ss_pred EEeeecccCCcHHHHHhhcc-------CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEE
Confidence 99999999999999999865 89999999999999999999964 5789999999999999999999999
Q ss_pred eccccccccCCCCCCCccccCCccccccccccccCccccCCC----CC--CCcccchHHHHHHHHHHhCC----------
Q 047768 854 SDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG----EA--SMRGGVYSYGILLLEIFTRR---------- 917 (1009)
Q Consensus 854 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~--~~~~DvwS~Gvvl~elltg~---------- 917 (1009)
+|+|+|....... ...+ ......+||.+|||||++... .+ -..+||||||.|+||+..+.
T Consensus 358 ADLGLAv~h~~~t--~~id--i~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~ 433 (513)
T KOG2052|consen 358 ADLGLAVRHDSDT--DTID--IPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQ 433 (513)
T ss_pred eeceeeEEecccC--Cccc--CCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhc
Confidence 9999998776542 1112 334457899999999987653 12 35689999999999998753
Q ss_pred CCCcccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 047768 918 RPTESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKL 997 (1009)
Q Consensus 918 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L 997 (1009)
.||......+.+..+......-+.++..+. ..+...+++..+.++|+.||..+|..|-|+-.+.+.|
T Consensus 434 ~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ip-------------nrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl 500 (513)
T KOG2052|consen 434 LPYYDVVPSDPSFEEMRKVVCVQKLRPNIP-------------NRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTL 500 (513)
T ss_pred CCcccCCCCCCCHHHHhcceeecccCCCCC-------------cccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHH
Confidence 477777666666665544433333332222 3456678889999999999999999999999999999
Q ss_pred HHHHH
Q 047768 998 CHARQ 1002 (1009)
Q Consensus 998 ~~i~~ 1002 (1009)
.++.+
T Consensus 501 ~~l~~ 505 (513)
T KOG2052|consen 501 AKLSN 505 (513)
T ss_pred HHHhc
Confidence 98875
No 22
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-40 Score=343.42 Aligned_cols=202 Identities=30% Similarity=0.433 Sum_probs=181.0
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCc
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVD 776 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 776 (1009)
.++|++.+.||+|+||+||.++.+++++.+|+|+++... ....+...+|..++.+++||.||++.-. |+..+
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ys-----FQt~~ 98 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYS-----FQTEE 98 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEe-----cccCC
Confidence 467999999999999999999999999999999996442 2345678899999999999999999865 56668
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
.+|+|+||+.||.|...+++.+. +++..+.-++.+|+.||.|||++ +||||||||+|||+|++|+++|+||
T Consensus 99 kLylVld~~~GGeLf~hL~~eg~------F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDF 169 (357)
T KOG0598|consen 99 KLYLVLDYLNGGELFYHLQREGR------FSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDF 169 (357)
T ss_pred eEEEEEeccCCccHHHHHHhcCC------cchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEecc
Confidence 99999999999999999997664 89999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCccc
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESM 923 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~ 923 (1009)
|+++..-.. .....+++||+.|||||++.+..|+.++|.||+||++|||++|.+||...
T Consensus 170 gL~k~~~~~--------~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~ 228 (357)
T KOG0598|consen 170 GLCKEDLKD--------GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAE 228 (357)
T ss_pred ccchhcccC--------CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCc
Confidence 999854322 23445589999999999999999999999999999999999999999743
No 23
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-40 Score=350.77 Aligned_cols=261 Identities=28% Similarity=0.387 Sum_probs=204.9
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
..+|...+.||+|+||+||++..+.+|...|||.+........+.+.+|+++|++++|||||+++|.....+ . ..++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~--~-~~~~ 92 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRE--N-DEYN 92 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCcccccc--C-eeeE
Confidence 346777899999999999999999889999999997664333567899999999999999999999743321 1 3689
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCC-CCceEEecccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDH-DMVAHVSDFGL 858 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~-~~~~kl~DfGl 858 (1009)
+.|||+++|+|.+++.+.+.. +++..+..+++|+++||+|||++ +||||||||+|||++. ++.+||+|||+
T Consensus 93 i~mEy~~~GsL~~~~~~~g~~-----l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~ 164 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYGGK-----LPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGL 164 (313)
T ss_pred eeeeccCCCcHHHHHHHcCCC-----CCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcc
Confidence 999999999999999987632 99999999999999999999999 9999999999999999 79999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
++...... ..........||+.|||||++.++ ....++||||+||++.||+||+.||.... ....+.-..
T Consensus 165 a~~~~~~~-----~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~----~~~~~~~~i 235 (313)
T KOG0198|consen 165 AKKLESKG-----TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFF----EEAEALLLI 235 (313)
T ss_pred cccccccc-----ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhc----chHHHHHHH
Confidence 98766311 111233457899999999999964 34469999999999999999999987531 111111111
Q ss_pred ccch-hhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 047768 938 LPEK-VMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCH 999 (1009)
Q Consensus 938 ~~~~-~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~ 999 (1009)
.... ... .+.....+..+++..|+..||+.||||.|+++.---
T Consensus 236 g~~~~~P~-------------------ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~ 279 (313)
T KOG0198|consen 236 GREDSLPE-------------------IPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFL 279 (313)
T ss_pred hccCCCCC-------------------CCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence 1000 000 011223356799999999999999999999886543
No 24
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-40 Score=348.45 Aligned_cols=281 Identities=27% Similarity=0.354 Sum_probs=213.3
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHh--cCCCCcceEEeeeeccccCCCceE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRS--IRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
......+.+|+|+||.||+|+.. ++.||||+|... +...|+.|-++.+- ++|+||++++++....... ...+
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~-~~ey 283 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD-RMEY 283 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc--CceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCcc-ccce
Confidence 34555688999999999999995 799999999644 35778888888775 5899999999986554322 4578
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcC------CCCceecCCCCCceeeCCCCceE
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHC------QPPIVHGDLKPSNVLLDHDMVAH 852 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------~~~ivHrdlk~~Nill~~~~~~k 852 (1009)
++|+||.+.|+|.+||+.+. ++|.+..+|+..+++||+|||+.. +|+|+|||||++||||.+|+++.
T Consensus 284 wLVt~fh~kGsL~dyL~~nt-------isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTcc 356 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLKANT-------ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCC 356 (534)
T ss_pred eEEeeeccCCcHHHHHHhcc-------ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEE
Confidence 99999999999999999876 899999999999999999999864 68999999999999999999999
Q ss_pred EeccccccccCCCCCCCccccCCccccccccccccCccccCCCC------CCCcccchHHHHHHHHHHhCCCCCcc-ccc
Q 047768 853 VSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGE------ASMRGGVYSYGILLLEIFTRRRPTES-MFN 925 (1009)
Q Consensus 853 l~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwS~Gvvl~elltg~~p~~~-~~~ 925 (1009)
|+|||+|..+.++. ......+.+||.+|||||++.+.. .-.+.||||+|.|+|||+++..-+.. ...
T Consensus 357 IaDFGLAl~~~p~~------~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp 430 (534)
T KOG3653|consen 357 IADFGLALRLEPGK------PQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVP 430 (534)
T ss_pred eeccceeEEecCCC------CCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCC
Confidence 99999999887542 224445689999999999987642 23578999999999999998764421 111
Q ss_pred C-CccHHHHHHHh-ccchhhhccCCCCCChhhhhhh-ccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 047768 926 E-GLTLHEFAKRA-LPEKVMEIVDPSLLPLEEERTN-SRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQ 1002 (1009)
Q Consensus 926 ~-~~~~~~~~~~~-~~~~~~~~~d~~l~~~~~~r~~-~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~ 1002 (1009)
+ .......+... .-+++.+.+- ..+.||. ...+..+..+..+.+.+..||+.||+.|.|+.=|.+++.++..
T Consensus 431 ~Yqlpfe~evG~hPt~e~mq~~VV-----~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~ 505 (534)
T KOG3653|consen 431 EYQLPFEAEVGNHPTLEEMQELVV-----RKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMM 505 (534)
T ss_pred cccCchhHHhcCCCCHHHHHHHHH-----hhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhc
Confidence 1 11122111111 1111222111 1111222 1235666778889999999999999999999999999988766
Q ss_pred hhh
Q 047768 1003 NFL 1005 (1009)
Q Consensus 1003 ~~~ 1005 (1009)
-.+
T Consensus 506 ~~~ 508 (534)
T KOG3653|consen 506 LWE 508 (534)
T ss_pred cCC
Confidence 554
No 25
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=5.6e-40 Score=321.47 Aligned_cols=273 Identities=21% Similarity=0.274 Sum_probs=208.1
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc--chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG--GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
.+|...+++|+|.||.||+|++..+|+.||||+++..... ......+||+.++.++|+||+.+++++ ...+..
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F-----~~~~~l 76 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVF-----PHKSNL 76 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhc-----cCCCce
Confidence 4688889999999999999999999999999999765432 345788999999999999999999984 445788
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
.+|+|||+. +|+..++.... .++..+++.++.++++|++|+|++ .|+||||||.|+|++++|.+||+|||+
T Consensus 77 ~lVfEfm~t-dLe~vIkd~~i-----~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGL 147 (318)
T KOG0659|consen 77 SLVFEFMPT-DLEVVIKDKNI-----ILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGL 147 (318)
T ss_pred EEEEEeccc-cHHHHhccccc-----ccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccc
Confidence 999999964 99999988764 499999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
|+.+.... ......+-|..|+|||.+.+ ..|+...||||.||++.||+-|.+-|.. ..+..++..+.+..
T Consensus 148 Ar~f~~p~--------~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG-~sDidQL~~If~~L 218 (318)
T KOG0659|consen 148 ARFFGSPN--------RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPG-DSDIDQLSKIFRAL 218 (318)
T ss_pred hhccCCCC--------cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCC-CchHHHHHHHHHHc
Confidence 99887542 12223367899999998887 5689999999999999999987665543 22323333333322
Q ss_pred ccchhhhccCCCCCChhhhhh----hccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 938 LPEKVMEIVDPSLLPLEEERT----NSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 938 ~~~~~~~~~d~~l~~~~~~r~----~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
..+.-.++-+-.-.+++.+-. .........+.....+++..++..+|.+|+|++|++++
T Consensus 219 GTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 219 GTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred CCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 222111111111111111100 01111222344556899999999999999999999764
No 26
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-40 Score=355.53 Aligned_cols=260 Identities=25% Similarity=0.343 Sum_probs=210.1
Q ss_pred HHHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecc---cccchHHHHHHHHHHHhc-CCCCcceEEeeeecccc
Q 047768 697 SKATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLE---QKGGSKSFAAECEALRSI-RHRNLIKIVTICSSIDF 772 (1009)
Q Consensus 697 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 772 (1009)
.....+|.+++.||+|+|++|++|+.+.++++||||++... .....+-+.+|-++|.++ .||.|++++..+
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TF----- 143 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTF----- 143 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEe-----
Confidence 34457899999999999999999999999999999999533 233346678899999999 899999999774
Q ss_pred CCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceE
Q 047768 773 KGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 852 (1009)
Q Consensus 773 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~k 852 (1009)
++....|.|+||+++|+|.+++++.+. +++...+.+|.+|+.|++|||++ |||||||||+|||+|.||++|
T Consensus 144 QD~~sLYFvLe~A~nGdll~~i~K~Gs------fde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhik 214 (604)
T KOG0592|consen 144 QDEESLYFVLEYAPNGDLLDLIKKYGS------FDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIK 214 (604)
T ss_pred ecccceEEEEEecCCCcHHHHHHHhCc------chHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEE
Confidence 455789999999999999999998864 99999999999999999999999 999999999999999999999
Q ss_pred EeccccccccCCCCCCCcc---c--cCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCC
Q 047768 853 VSDFGLAKFLSASPLGNVV---E--TPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEG 927 (1009)
Q Consensus 853 l~DfGla~~~~~~~~~~~~---~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~ 927 (1009)
|+|||-|+.+.+....... + .......++||..|.+||++.++..++++|+|+|||++|.|+.|++||.... +.
T Consensus 215 ITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N-ey 293 (604)
T KOG0592|consen 215 ITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN-EY 293 (604)
T ss_pred EeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc-HH
Confidence 9999999998765433111 1 1112256899999999999999999999999999999999999999997432 11
Q ss_pred ccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 928 LTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
....+ +++-.+.. + ...++.+.+++.+-+..||.+|+|.+|+.+
T Consensus 294 liFqk------------I~~l~y~f-p-----------~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 294 LIFQK------------IQALDYEF-P-----------EGFPEDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred HHHHH------------HHHhcccC-C-----------CCCCHHHHHHHHHHHccCccccccHHHHhh
Confidence 11111 11111110 0 122245678888999999999999988765
No 27
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-41 Score=354.70 Aligned_cols=274 Identities=20% Similarity=0.268 Sum_probs=210.2
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccc-hHHHHHHHHHHHhcC-CCCcceEEeeeeccccCCCce
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGG-SKSFAAECEALRSIR-HRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~ 777 (1009)
.++|.+.++||.|+||.||+|+.++++..||||+++..-... ...-.||++.+++++ ||||+++..++.+. ...
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~----~~~ 84 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDN----DRI 84 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhcc----Cce
Confidence 468889999999999999999999999999999986443322 234468999999998 99999999986543 238
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++|||||+ .+|++.++.+.. .+++.++..|+.||++||+|+|.+ |+.|||+||+|||+.....+||+|||
T Consensus 85 L~fVfE~Md-~NLYqLmK~R~r-----~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFG 155 (538)
T KOG0661|consen 85 LYFVFEFMD-CNLYQLMKDRNR-----LFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFG 155 (538)
T ss_pred EeeeHHhhh-hhHHHHHhhcCC-----cCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccc
Confidence 999999995 599999998865 499999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccC-CCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHH
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGL-GGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKR 936 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 936 (1009)
+||.+...+ ..+.++.|..|+|||++. .+.|+.+.||||+|||++|+.+-++-|..... .+.+.++...
T Consensus 156 LARev~Skp---------PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE-~Dqi~KIc~V 225 (538)
T KOG0661|consen 156 LAREVRSKP---------PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASE-IDQIYKICEV 225 (538)
T ss_pred cccccccCC---------CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcH-HHHHHHHHHH
Confidence 999876542 334567899999999865 46789999999999999999998888875432 2223333322
Q ss_pred hccchh------hhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 937 ALPEKV------MEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 937 ~~~~~~------~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
...... ..+...+=...|...+.........+..+.++++.+|+++||++||||+|+++.
T Consensus 226 LGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 226 LGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred hCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 211111 111111111122221222222223366788899999999999999999999864
No 28
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-40 Score=358.66 Aligned_cols=249 Identities=22% Similarity=0.300 Sum_probs=209.4
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
..|....+||+|+.|.||.|....+++.||||++........+-+.+|+.+|+..+|+|||++++.+... +..++
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~-----deLWV 347 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVG-----DELWV 347 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhccc-----ceeEE
Confidence 4566778999999999999999999999999999888777778899999999999999999999876543 78999
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
|||||++|+|.|.+.... +++.++..|++++++||+|||.+ +|+|||||.+|||++.+|.+||+|||++.
T Consensus 348 VMEym~ggsLTDvVt~~~-------~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFca 417 (550)
T KOG0578|consen 348 VMEYMEGGSLTDVVTKTR-------MTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCA 417 (550)
T ss_pred EEeecCCCchhhhhhccc-------ccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeee
Confidence 999999999999998765 89999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHH--HHhc
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFA--KRAL 938 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~--~~~~ 938 (1009)
.+.... ......+||+.|||||+.....|+++.||||||++++||+.|++||-... .+.... ....
T Consensus 418 qi~~~~--------~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~----PlrAlyLIa~ng 485 (550)
T KOG0578|consen 418 QISEEQ--------SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNEN----PLRALYLIATNG 485 (550)
T ss_pred cccccc--------CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCC----hHHHHHHHhhcC
Confidence 776432 34556889999999999999999999999999999999999999986311 111111 1111
Q ss_pred cchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 939 PEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 939 ~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
..++ ...+..-.++.++..+|+..|+++|+++.|+++.
T Consensus 486 ~P~l--------------------k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 486 TPKL--------------------KNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred CCCc--------------------CCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 1111 1111223457899999999999999999999863
No 29
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-39 Score=339.91 Aligned_cols=266 Identities=21% Similarity=0.314 Sum_probs=210.2
Q ss_pred HhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccch-HHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGS-KSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
..++|...+.||.|..++||+|+....+..||||+++.+.-... +.+.+|+..|+.++||||++++..+... ..
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~-----~~ 98 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVD-----SE 98 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEec-----ce
Confidence 34688899999999999999999999999999999987765444 8899999999999999999999876543 78
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.|+||.||.+||+.+.++..-.. .+++..+..|.+++++||.|||.+ |.||||||+.||||+.+|.|||+|||
T Consensus 99 LWvVmpfMa~GS~ldIik~~~~~----Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFg 171 (516)
T KOG0582|consen 99 LWVVMPFMAGGSLLDIIKTYYPD----GLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFG 171 (516)
T ss_pred eEEeehhhcCCcHHHHHHHHccc----cccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCce
Confidence 99999999999999999875432 389999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCC--CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG--GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 935 (1009)
.+-.+........ .....+.||+.|||||++.. ..|+.|+||||||+...|+.+|..||..+..-..-+... +
T Consensus 172 vsa~l~~~G~R~~----~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tL-q 246 (516)
T KOG0582|consen 172 VSASLFDSGDRQV----TRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTL-Q 246 (516)
T ss_pred eeeeecccCceee----EeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHh-c
Confidence 8877766442111 11156789999999999544 468999999999999999999999998653221111111 1
Q ss_pred HhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 936 RALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 936 ~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
...+...... + ..+ ........+.+++..|+..||.+|||+++++.
T Consensus 247 n~pp~~~t~~----~---~~d-------~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 247 NDPPTLLTSG----L---DKD-------EDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred CCCCCccccc----C---ChH-------HhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 1111111111 1 111 01123346889999999999999999999875
No 30
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-40 Score=352.47 Aligned_cols=241 Identities=27% Similarity=0.396 Sum_probs=201.3
Q ss_pred CCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEecc
Q 047768 706 SNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYEYM 785 (1009)
Q Consensus 706 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 785 (1009)
.+-||.|+.|.||.|+.+ ++.||||+++.- -..+|+.|++++||||+.|.|+|+.. ..+|+|||||
T Consensus 129 LeWlGSGaQGAVF~Grl~--netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtqs-----PcyCIiMEfC 194 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLH--NETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQS-----PCYCIIMEFC 194 (904)
T ss_pred hhhhccCcccceeeeecc--CceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecCC-----ceeEEeeecc
Confidence 356999999999999996 889999987422 24589999999999999999999864 7889999999
Q ss_pred CCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccCCC
Q 047768 786 QNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSAS 865 (1009)
Q Consensus 786 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 865 (1009)
..|-|+..|+.... ++......|..+||.||.|||.+ .|||||||.-||||+.+..|||+|||-++.....
T Consensus 195 a~GqL~~VLka~~~------itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~ 265 (904)
T KOG4721|consen 195 AQGQLYEVLKAGRP------ITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK 265 (904)
T ss_pred ccccHHHHHhccCc------cCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh
Confidence 99999999998764 77888899999999999999999 9999999999999999999999999999876542
Q ss_pred CCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchhhhc
Q 047768 866 PLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKVMEI 945 (1009)
Q Consensus 866 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 945 (1009)
.....++||..|||||++.+.+.++|+||||||||||||+||..||...... .+++.+.
T Consensus 266 ---------STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss-----AIIwGVG------- 324 (904)
T KOG4721|consen 266 ---------STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS-----AIIWGVG------- 324 (904)
T ss_pred ---------hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh-----eeEEecc-------
Confidence 3445689999999999999999999999999999999999999999743221 1111000
Q ss_pred cCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 047768 946 VDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHAR 1001 (1009)
Q Consensus 946 ~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~ 1001 (1009)
.-.+ ....+..|++.+.-++++||+-.|..||++.+++..|+-..
T Consensus 325 -sNsL----------~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~ 369 (904)
T KOG4721|consen 325 -SNSL----------HLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIAS 369 (904)
T ss_pred -CCcc----------cccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcC
Confidence 0000 11233478888999999999999999999999999886443
No 31
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-39 Score=357.27 Aligned_cols=264 Identities=28% Similarity=0.405 Sum_probs=210.3
Q ss_pred HHhccCccCCcccccCCceEEEEEEecCC----eEEEEEEeeccc---ccchHHHHHHHHHHHhcCCCCcceEEeeeecc
Q 047768 698 KATNEFSSSNTIGRGSFGFVYKGVLHENG----MLVAVKVINLEQ---KGGSKSFAAECEALRSIRHRNLIKIVTICSSI 770 (1009)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~----~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 770 (1009)
..-++....++||+|+||+||+|+.+..+ ..||||..+... ....+++.+|+++|++++|||||+++|++...
T Consensus 154 l~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~ 233 (474)
T KOG0194|consen 154 LSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLE 233 (474)
T ss_pred EeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCC
Confidence 33445566689999999999999998532 238999987532 33457899999999999999999999998764
Q ss_pred ccCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCc
Q 047768 771 DFKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMV 850 (1009)
Q Consensus 771 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~ 850 (1009)
...++|||+|.||+|.+|+++.... ++..++..++.++|.||+|||++ ++|||||.++|+|++.++.
T Consensus 234 -----~Pl~ivmEl~~gGsL~~~L~k~~~~-----v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~ 300 (474)
T KOG0194|consen 234 -----EPLMLVMELCNGGSLDDYLKKNKKS-----LPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGV 300 (474)
T ss_pred -----CccEEEEEecCCCcHHHHHHhCCCC-----CCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCe
Confidence 6789999999999999999988753 99999999999999999999999 9999999999999999999
Q ss_pred eEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCcc
Q 047768 851 AHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLT 929 (1009)
Q Consensus 851 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~ 929 (1009)
+||+|||+++.-.... ... ....-+..|+|||.+..+.|+.++|||||||++||+++ |..||..+...
T Consensus 301 vKISDFGLs~~~~~~~---~~~-----~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~--- 369 (474)
T KOG0194|consen 301 VKISDFGLSRAGSQYV---MKK-----FLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY--- 369 (474)
T ss_pred EEeCccccccCCccee---ecc-----ccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH---
Confidence 9999999987543111 000 01134679999999999999999999999999999999 88899865322
Q ss_pred HHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhh
Q 047768 930 LHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQNFL 1005 (1009)
Q Consensus 930 ~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~~~~ 1005 (1009)
+..........+ .+ .+...+.++..++.+||..+|+.||+|.++.+.++.+.+...
T Consensus 370 --~v~~kI~~~~~r-------~~-----------~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 370 --EVKAKIVKNGYR-------MP-----------IPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred --HHHHHHHhcCcc-------CC-----------CCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 111111111111 00 111345567888999999999999999999999998877644
No 32
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-39 Score=349.47 Aligned_cols=263 Identities=25% Similarity=0.430 Sum_probs=220.5
Q ss_pred HHHHHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCC
Q 047768 695 ELSKATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKG 774 (1009)
Q Consensus 695 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 774 (1009)
+++....+...-++||-|-||.||.|.|+...-.||||.++.+ .....+|.+|+.+|+.++|||+|+++|+|+..
T Consensus 261 kWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~E---- 335 (1157)
T KOG4278|consen 261 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHE---- 335 (1157)
T ss_pred hhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccC----
Confidence 3444445667778999999999999999998999999999744 34578999999999999999999999999864
Q ss_pred CceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEe
Q 047768 775 VDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 854 (1009)
Q Consensus 775 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~ 854 (1009)
...|+|+|||..|+|.+|+++.... .++..-.+.+|.||+.||+||..+ .+|||||.++|+|++++..|||+
T Consensus 336 -pPFYIiTEfM~yGNLLdYLRecnr~----ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvA 407 (1157)
T KOG4278|consen 336 -PPFYIITEFMCYGNLLDYLRECNRS----EVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVA 407 (1157)
T ss_pred -CCeEEEEecccCccHHHHHHHhchh----hcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEee
Confidence 5679999999999999999987653 477778899999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHH
Q 047768 855 DFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEF 933 (1009)
Q Consensus 855 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~ 933 (1009)
|||+++.+....+ ....+..-++.|.|||-+....++.|+|||+|||++||+.| |-.||.... +.
T Consensus 408 DFGLsRlMtgDTY-------TAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid-----lS-- 473 (1157)
T KOG4278|consen 408 DFGLSRLMTGDTY-------TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LS-- 473 (1157)
T ss_pred ccchhhhhcCCce-------ecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc-----HH--
Confidence 9999999876533 22223445789999999999999999999999999999999 888987432 11
Q ss_pred HHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 047768 934 AKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHAR 1001 (1009)
Q Consensus 934 ~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~ 1001 (1009)
.++++++..++ ...++.|++.++++|++||++.|.+||+++|+-+.++.+-
T Consensus 474 -------qVY~LLEkgyR----------M~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 474 -------QVYGLLEKGYR----------MDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred -------HHHHHHhcccc----------ccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 23344433322 2334578899999999999999999999999999998754
No 33
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-39 Score=347.91 Aligned_cols=264 Identities=23% Similarity=0.367 Sum_probs=214.8
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccch-HHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGS-KSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
+...+.++||+|-||+|..++.. .+..||||+++.....+. .+|.+|+++|.+++||||++++|+|... +..+
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~D-----ePic 611 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQD-----DPLC 611 (807)
T ss_pred hheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecC-----CchH
Confidence 34567799999999999999985 569999999987765544 7899999999999999999999999864 6789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+|+|||++|+|.+|+.++... ........+|+.|||.||+||.+. ++||||+.++|+|+|.++++||+|||++
T Consensus 612 mI~EYmEnGDLnqFl~aheap----t~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgms 684 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSAHELP----TAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMS 684 (807)
T ss_pred HHHHHHhcCcHHHHHHhccCc----ccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccc
Confidence 999999999999999987543 245566778999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh--CCCCCcccccCCccHHHHHHHh
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT--RRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt--g~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
|-+..++++... ...+-+++|||||.+..++++.++|||+||+++||+++ ...||+.+.+++ ..
T Consensus 685 R~lysg~yy~vq------gr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~--vv------ 750 (807)
T KOG1094|consen 685 RNLYSGDYYRVQ------GRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ--VV------ 750 (807)
T ss_pred cccccCCceeee------cceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH--HH------
Confidence 988776554322 12345789999999999999999999999999999988 788988665431 11
Q ss_pred ccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 047768 938 LPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHA 1000 (1009)
Q Consensus 938 ~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i 1000 (1009)
+...++++..-.... ...+.-|+.++++++.+||..|.++||+++++...|++-
T Consensus 751 --en~~~~~~~~~~~~~-------l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 751 --ENAGEFFRDQGRQVV-------LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred --HhhhhhcCCCCccee-------ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 112222221111111 123346788899999999999999999999999988764
No 34
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=7e-39 Score=323.02 Aligned_cols=272 Identities=21% Similarity=0.259 Sum_probs=207.3
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc--chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG--GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
.++|++.++|++|+||.||+|+++.+++.||+|+++.+... -.-.-.+||.++.+++|||||.+-.+.... .-+.
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~---~~d~ 151 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGS---NMDK 151 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecc---ccce
Confidence 46788899999999999999999999999999999765432 234567999999999999999998886654 2356
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.|+|||||++ +|.+.++.... ++...+++.+..|+++|++|||.. .|+|||||++|+|++..|.+||+|||
T Consensus 152 iy~VMe~~Eh-DLksl~d~m~q-----~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFG 222 (419)
T KOG0663|consen 152 IYIVMEYVEH-DLKSLMETMKQ-----PFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFG 222 (419)
T ss_pred eeeeHHHHHh-hHHHHHHhccC-----CCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccc
Confidence 8999999977 99999998874 489999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHH
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKR 936 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 936 (1009)
+||.+... ....+..+-|..|+|||.+.+. .|+++.|+||+|||+.||+++++-|..... ...+..+...
T Consensus 223 LAR~ygsp--------~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE-~dQl~~If~l 293 (419)
T KOG0663|consen 223 LAREYGSP--------LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSE-IDQLDKIFKL 293 (419)
T ss_pred hhhhhcCC--------cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCch-HHHHHHHHHH
Confidence 99987653 1334557789999999998774 689999999999999999999988864322 1223332221
Q ss_pred hc-cc-h-hhhccCCC------CCChh--hhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 937 AL-PE-K-VMEIVDPS------LLPLE--EERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 937 ~~-~~-~-~~~~~d~~------l~~~~--~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.. |. . +..+...- +...+ .-|....... --+.-++++...+.+||.+|.||.|.++
T Consensus 294 lGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~---lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 294 LGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALS---LSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred hCCCccccCCCccccchhhccccCCCCchhhhhhccccc---cchhHHHHHHHHhccCccccccHHHhhc
Confidence 11 10 0 11111000 00000 0111111110 1134578999999999999999999875
No 35
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=340.67 Aligned_cols=250 Identities=23% Similarity=0.319 Sum_probs=207.3
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc-chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG-GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
..|+..+.||+|.||.||+|.+..+++.||+|++..+... ....+++|+.++.+++++||.+++|.+... ..++
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g-----~~Lw 87 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKG-----TKLW 87 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeec-----ccHH
Confidence 4677778999999999999999999999999999876543 357899999999999999999999986543 6789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
++||||.+|++.+.++.... +++..+.-+.+++..|+.|||++ +.+|||||+.||++..+|.||++|||.+
T Consensus 88 iiMey~~gGsv~~lL~~~~~------~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa 158 (467)
T KOG0201|consen 88 IIMEYCGGGSVLDLLKSGNI------LDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVA 158 (467)
T ss_pred HHHHHhcCcchhhhhccCCC------CccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEeccee
Confidence 99999999999999987652 57788888999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhcc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
-.+.... .....++||+.|||||++.+..|+.|+||||+|++.+||++|.+|+......
T Consensus 159 ~ql~~~~--------~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPm------------- 217 (467)
T KOG0201|consen 159 GQLTNTV--------KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPM------------- 217 (467)
T ss_pred eeeechh--------hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcc-------------
Confidence 8776532 3335689999999999999999999999999999999999999998743221
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
.+.-++.+.--+ .....+-..+.+++..|+..+|+.||+|.+++..
T Consensus 218 -rvlflIpk~~PP----------~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 218 -RVLFLIPKSAPP----------RLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred -eEEEeccCCCCC----------ccccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 111111111111 0111444568899999999999999999999763
No 36
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=3.8e-39 Score=344.37 Aligned_cols=199 Identities=32% Similarity=0.465 Sum_probs=179.1
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc--chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG--GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
++|.+.+.||+|.||.||||+.+.+.+.||+|.+....+. ..+.+.+|++++++++||||+.+++++ +...+.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esf-----Et~~~~ 76 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESF-----ETSAHL 76 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhh-----cccceE
Confidence 5788889999999999999999999999999999644332 346789999999999999999999984 556899
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
++|+||+.+ +|..++...+. ++++.+..++.+++.||.|||+. +|.|||+||.|||++.++++|+||||+
T Consensus 77 ~vVte~a~g-~L~~il~~d~~------lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~ 146 (808)
T KOG0597|consen 77 WVVTEYAVG-DLFTILEQDGK------LPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGL 146 (808)
T ss_pred EEEehhhhh-hHHHHHHhccC------CCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhh
Confidence 999999976 99999988764 99999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcc
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTES 922 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~ 922 (1009)
|+-+.... ...+...||+-|||||...+++|+..+|+||+||++||+++|++||..
T Consensus 147 Ar~m~~~t--------~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a 202 (808)
T KOG0597|consen 147 ARAMSTNT--------SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA 202 (808)
T ss_pred hhhcccCc--------eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH
Confidence 99776532 344567899999999999999999999999999999999999999963
No 37
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=3.4e-38 Score=354.45 Aligned_cols=269 Identities=23% Similarity=0.364 Sum_probs=205.4
Q ss_pred HhccCccCCcccccCCceEEEEEEe-----cCCeEEEEEEeecccc-cchHHHHHHHHHHHhc-CCCCcceEEeeeeccc
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLH-----ENGMLVAVKVINLEQK-GGSKSFAAECEALRSI-RHRNLIKIVTICSSID 771 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 771 (1009)
..++|.+.++||+|+||.||+|.+. .+++.||||+++.... ...+.+.+|+++++++ +||||++++++|...
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~- 83 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKP- 83 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC-
Confidence 3468999999999999999999863 3456899999864322 2245788999999999 899999999987532
Q ss_pred cCCCceEEEEEeccCCCCHHHHHhccCCCC--------------------------------------------------
Q 047768 772 FKGVDFKALVYEYMQNGSLEEWLHQRDDQL-------------------------------------------------- 801 (1009)
Q Consensus 772 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-------------------------------------------------- 801 (1009)
....++||||+++|+|.+++.......
T Consensus 84 ---~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T cd05102 84 ---NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP 160 (338)
T ss_pred ---CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence 346789999999999999997643110
Q ss_pred ------CccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccCCCCCCCccccCC
Q 047768 802 ------GICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSASPLGNVVETPS 875 (1009)
Q Consensus 802 ------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 875 (1009)
....+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ .
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~------~ 231 (338)
T cd05102 161 QETDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY------V 231 (338)
T ss_pred hhccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcch------h
Confidence 012478889999999999999999999 9999999999999999999999999999865432110 1
Q ss_pred ccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhccchhhhccCCCCCChh
Q 047768 876 SSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLE 954 (1009)
Q Consensus 876 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 954 (1009)
......+++.|+|||++.+..++.++|||||||++|||++ |..||....... ...... .+......
T Consensus 232 ~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~----~~~~~~--------~~~~~~~~- 298 (338)
T cd05102 232 RKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE----EFCQRL--------KDGTRMRA- 298 (338)
T ss_pred cccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH----HHHHHH--------hcCCCCCC-
Confidence 1122346788999999999999999999999999999997 999987432111 111100 00000000
Q ss_pred hhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 047768 955 EERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQN 1003 (1009)
Q Consensus 955 ~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~~ 1003 (1009)
+..+..++.+++.+||+.||++|||+.|+++.|+.+.++
T Consensus 299 ----------~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 299 ----------PENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred ----------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 012334678999999999999999999999999987653
No 38
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-38 Score=346.21 Aligned_cols=251 Identities=24% Similarity=0.351 Sum_probs=203.9
Q ss_pred HHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecc----cc-cchHHHHHHHHHHHhcC-CCCcceEEeeeeccc
Q 047768 698 KATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLE----QK-GGSKSFAAECEALRSIR-HRNLIKIVTICSSID 771 (1009)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 771 (1009)
...+.|.+.+.||+|.||.|+.|.+..++..||+|+++.. .. ...+.+.+|+.++++++ ||||++++.+....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~- 92 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATP- 92 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecC-
Confidence 3456899999999999999999999999999999987543 11 23456778999999998 99999999996543
Q ss_pred cCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCC-Cc
Q 047768 772 FKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHD-MV 850 (1009)
Q Consensus 772 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~-~~ 850 (1009)
...++||||+.+|+|.+++.+... +.+.++..+++|++.|++|+|++ +|+||||||+||+++.+ ++
T Consensus 93 ----~~~~ivmEy~~gGdL~~~i~~~g~------l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~ 159 (370)
T KOG0583|consen 93 ----TKIYIVMEYCSGGDLFDYIVNKGR------LKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGN 159 (370)
T ss_pred ----CeEEEEEEecCCccHHHHHHHcCC------CChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCC
Confidence 569999999999999999998443 88999999999999999999999 99999999999999999 99
Q ss_pred eEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCC-C-CCcccchHHHHHHHHHHhCCCCCcccccCCc
Q 047768 851 AHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGE-A-SMRGGVYSYGILLLEIFTRRRPTESMFNEGL 928 (1009)
Q Consensus 851 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~-~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~ 928 (1009)
+||+|||++...... .......+||+.|+|||++.+.. | +.++||||+||++|.|++|+.||...
T Consensus 160 ~Kl~DFG~s~~~~~~--------~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~----- 226 (370)
T KOG0583|consen 160 LKLSDFGLSAISPGE--------DGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS----- 226 (370)
T ss_pred EEEeccccccccCCC--------CCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc-----
Confidence 999999999877311 13345678999999999999977 7 58999999999999999999999852
Q ss_pred cHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 047768 929 TLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVV 994 (1009)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl 994 (1009)
............. ...|. +.. -.++..++.+|+..||.+|+|+.|++
T Consensus 227 ~~~~l~~ki~~~~---------~~~p~-------~~~---S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 227 NVPNLYRKIRKGE---------FKIPS-------YLL---SPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred cHHHHHHHHhcCC---------ccCCC-------CcC---CHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 2222222111110 00110 000 23467999999999999999999998
No 39
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.5e-38 Score=345.64 Aligned_cols=249 Identities=22% Similarity=0.335 Sum_probs=210.2
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCc
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVD 776 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 776 (1009)
..-|..++.||.|+-|.|-.|++.++|+.+|||++..... .....+.+|+-+|+-+.||||+++++++.. ..
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~-----~~ 85 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWEN-----KQ 85 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeecc-----Cc
Confidence 3467888999999999999999999999999999965522 224578899999999999999999999654 48
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
++|+|.||+++|-|.+|+-.++. +++.++.++++||+.|+.|+|.. +|+|||+||+|+|+|..+++||+||
T Consensus 86 ~lylvlEyv~gGELFdylv~kG~------l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADF 156 (786)
T KOG0588|consen 86 HLYLVLEYVPGGELFDYLVRKGP------LPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADF 156 (786)
T ss_pred eEEEEEEecCCchhHHHHHhhCC------CCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeecc
Confidence 89999999999999999988774 89999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCCCCC-CCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEA-SMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 935 (1009)
|+|..-.++ ......+|+++|.|||++.+.+| +.++||||+|||+|.|+||+.||+ +..++....
T Consensus 157 GMAsLe~~g---------klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFd-----DdNir~LLl 222 (786)
T KOG0588|consen 157 GMASLEVPG---------KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFD-----DDNIRVLLL 222 (786)
T ss_pred ceeecccCC---------ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCC-----CccHHHHHH
Confidence 999865543 23345789999999999999998 789999999999999999999997 334554444
Q ss_pred HhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 936 RALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 936 ~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
++....+ ++ ++....+..+++.+|+..||++|.|++||.+.
T Consensus 223 KV~~G~f-~M-------------------Ps~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 223 KVQRGVF-EM-------------------PSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred HHHcCcc-cC-------------------CCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 3322221 11 11333457899999999999999999999864
No 40
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-38 Score=314.88 Aligned_cols=232 Identities=24% Similarity=0.314 Sum_probs=195.9
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCc
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVD 776 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 776 (1009)
.++|+..+.||.|+||.|..++.+.+|..+|+|+++.... ...+....|..+++.+.||.++++++.+.+ ..
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d-----~~ 117 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKD-----NS 117 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeecc-----CC
Confidence 3578888999999999999999999999999999975532 223456789999999999999999987544 48
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
..++||||++||-|.+++++.+. +++..++-+|.+|+.|++|||+. +|++||+||+|||+|.+|.+||+||
T Consensus 118 ~lymvmeyv~GGElFS~Lrk~~r------F~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDF 188 (355)
T KOG0616|consen 118 NLYMVMEYVPGGELFSYLRKSGR------FSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDF 188 (355)
T ss_pred eEEEEEeccCCccHHHHHHhcCC------CCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEec
Confidence 89999999999999999998764 99999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHH
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKR 936 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 936 (1009)
|+|+.... .....+||+.|+|||+++...|..++|-|||||++|||+.|.+||..... ...+.++...
T Consensus 189 GFAK~v~~-----------rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~-~~iY~KI~~~ 256 (355)
T KOG0616|consen 189 GFAKRVSG-----------RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP-IQIYEKILEG 256 (355)
T ss_pred cceEEecC-----------cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh-HHHHHHHHhC
Confidence 99997653 34568999999999999999999999999999999999999999975432 2233333332
Q ss_pred ------hccchhhhccCCCCCChhhhh
Q 047768 937 ------ALPEKVMEIVDPSLLPLEEER 957 (1009)
Q Consensus 937 ------~~~~~~~~~~d~~l~~~~~~r 957 (1009)
.+..++.+++...+..+...|
T Consensus 257 ~v~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 257 KVKFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred cccCCcccCHHHHHHHHHHHhhhhHhh
Confidence 234556666666666655555
No 41
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-38 Score=339.55 Aligned_cols=257 Identities=25% Similarity=0.391 Sum_probs=214.9
Q ss_pred cCccCCcccccCCceEEEEEEecC----CeEEEEEEeeccc-ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCc
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHEN----GMLVAVKVINLEQ-KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVD 776 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 776 (1009)
..+..++||+|-||.||+|.+... .-.||||..+.+. .+..+.|..|..+|++++||||++++|+|.+ .
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e------~ 463 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE------Q 463 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec------c
Confidence 444567899999999999998632 2358999987643 3346789999999999999999999999986 5
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
..++|||.++-|-|..|++.++.. ++......++.|++.||+|||++ .+|||||.++|||+.....||++||
T Consensus 464 P~WivmEL~~~GELr~yLq~nk~s-----L~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDF 535 (974)
T KOG4257|consen 464 PMWIVMELAPLGELREYLQQNKDS-----LPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADF 535 (974)
T ss_pred ceeEEEecccchhHHHHHHhcccc-----chHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeeccc
Confidence 689999999999999999988764 99999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHH
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 935 (1009)
|++|.+....++.. ....-+..|||||.+.-..++.++|||.|||.+||++. |..||....+.+..
T Consensus 536 GLSR~~ed~~yYka-------S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI------ 602 (974)
T KOG4257|consen 536 GLSRYLEDDAYYKA-------SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVI------ 602 (974)
T ss_pred chhhhccccchhhc-------cccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceE------
Confidence 99999887655321 12334678999999999999999999999999999999 99999754333211
Q ss_pred HhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 047768 936 RALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQN 1003 (1009)
Q Consensus 936 ~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~~ 1003 (1009)
..+-.. .+.+.+..|+..++.++.+||++||.+||++.|+...|+.+.++
T Consensus 603 -------~~iEnG-----------eRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qe 652 (974)
T KOG4257|consen 603 -------GHIENG-----------ERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQE 652 (974)
T ss_pred -------EEecCC-----------CCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHH
Confidence 111111 11234457889999999999999999999999999999998874
No 42
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.2e-37 Score=337.85 Aligned_cols=252 Identities=22% Similarity=0.319 Sum_probs=200.7
Q ss_pred CCcccccCCceEEEEEEecCCeEEEEEEeecccccc---hHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEE
Q 047768 706 SNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGG---SKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVY 782 (1009)
Q Consensus 706 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 782 (1009)
...+|+|++|.||+|.+ +|+.||||+++...... .+.+.+|+++|++++||||++++|++... ..+....++||
T Consensus 25 ~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~-~~~~~~~~lv~ 101 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDI-VDDLPRLSLIL 101 (283)
T ss_pred CeEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEec-ccCCCceEEEE
Confidence 36799999999999998 58999999997554333 36678999999999999999999997642 12335679999
Q ss_pred eccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccccc
Q 047768 783 EYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 862 (1009)
Q Consensus 783 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~ 862 (1009)
||+++|+|.+++.+.. .+++.....++.+++.|+.|||+.. +++||||||+||++++++.+||+|||+++..
T Consensus 102 Ey~~~g~L~~~l~~~~------~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~ 173 (283)
T PHA02988 102 EYCTRGYLREVLDKEK------DLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKIL 173 (283)
T ss_pred EeCCCCcHHHHHhhCC------CCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhh
Confidence 9999999999998754 3889999999999999999999742 7889999999999999999999999999865
Q ss_pred CCCCCCCccccCCccccccccccccCccccCC--CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccc
Q 047768 863 SASPLGNVVETPSSSIGVKGTIGYVAPEYGLG--GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPE 940 (1009)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 940 (1009)
.... ....|+..|+|||++.+ ..++.++|||||||++|||++|+.||..... ........
T Consensus 174 ~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~-----~~~~~~i~-- 235 (283)
T PHA02988 174 SSPP-----------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT-----KEIYDLII-- 235 (283)
T ss_pred cccc-----------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHH--
Confidence 4321 12457899999999876 6889999999999999999999999974321 11111110
Q ss_pred hhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 047768 941 KVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQ 1002 (1009)
Q Consensus 941 ~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~ 1002 (1009)
...... ..+..++.++.+++.+||+.||++|||++|+++.|+..+.
T Consensus 236 ------~~~~~~----------~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 236 ------NKNNSL----------KLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred ------hcCCCC----------CCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 000000 0011345568899999999999999999999999998764
No 43
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-37 Score=320.81 Aligned_cols=275 Identities=23% Similarity=0.285 Sum_probs=208.9
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEee--cccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVIN--LEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
...|...+.||+|+||.|+.|.++.+|+.||||++. .......++..+|++.++.++|+||+.+.++........-..
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 345655789999999999999999999999999986 334445678889999999999999999999987755556678
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.|+|+|+| +-+|.+.++.... ++...+..+..|+++|+.|+|+. +|+|||+||.|++++.+...||+|||
T Consensus 101 vYiV~elM-etDL~~iik~~~~------L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFG 170 (359)
T KOG0660|consen 101 VYLVFELM-ETDLHQIIKSQQD------LTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFG 170 (359)
T ss_pred eEEehhHH-hhHHHHHHHcCcc------ccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEecccc
Confidence 89999999 5699999988653 88999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHH--
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFA-- 934 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~-- 934 (1009)
+||..... ......+..+.|..|+|||++.. ..|+.+.||||.||++.||++|+.-|.....- .++..+.
T Consensus 171 LAR~~~~~------~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v-~Ql~lI~~~ 243 (359)
T KOG0660|consen 171 LARYLDKF------FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYV-HQLQLILEL 243 (359)
T ss_pred ceeecccc------CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchH-HHHHHHHHh
Confidence 99987643 11234456788999999998654 68999999999999999999999988642211 0111111
Q ss_pred ---------HHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 935 ---------KRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 935 ---------~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.....+.++..+...-.. +. ..........-...++++.+++..||.+|+|++|+++
T Consensus 244 lGtP~~e~l~~i~s~~ar~yi~slp~~-p~---~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 244 LGTPSEEDLQKIRSEKARPYIKSLPQI-PK---QPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred cCCCCHHHHHHhccHHHHHHHHhCCCC-CC---CCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 111112222222111110 00 0000000122235679999999999999999999976
No 44
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=307.69 Aligned_cols=279 Identities=21% Similarity=0.251 Sum_probs=220.0
Q ss_pred HHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 698 KATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
...++|.+.+.+|+|||+-||.++.-.+++.+|+|++.....++.+...+|++..++++|||++++++++.....+....
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 34578999999999999999999988899999999998877677788999999999999999999999987765556778
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.|+++.|...|+|.+.++....+ ...+++.++++|+.++++||.+||+. .++++||||||.||++++++.+++.|||
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~k--g~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~G 174 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIK--GNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLG 174 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhc--CCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEecc
Confidence 99999999999999999876654 23599999999999999999999998 3469999999999999999999999999
Q ss_pred cccccCCCCCCCc-cccCCccccccccccccCccccC---CCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHH
Q 047768 858 LAKFLSASPLGNV-VETPSSSIGVKGTIGYVAPEYGL---GGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEF 933 (1009)
Q Consensus 858 la~~~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~ 933 (1009)
.++...-.-.+.. ...-........|..|+|||.+. +...++++|||||||++|+|+.|..||+.....+.++.
T Consensus 175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSla-- 252 (302)
T KOG2345|consen 175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLA-- 252 (302)
T ss_pred CccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEE--
Confidence 9876542211000 00001112245789999999754 45679999999999999999999999975433221111
Q ss_pred HHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 047768 934 AKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHA 1000 (1009)
Q Consensus 934 ~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i 1000 (1009)
..+....+. -+......+.+.+++.+|++.||..||++.|++.++...
T Consensus 253 ---------LAv~n~q~s----------~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 253 ---------LAVQNAQIS----------IPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred ---------Eeeeccccc----------cCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 111111111 112223566789999999999999999999999988754
No 45
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.1e-38 Score=302.46 Aligned_cols=251 Identities=23% Similarity=0.339 Sum_probs=209.9
Q ss_pred HhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecc---cccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCC
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLE---QKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 775 (1009)
+.++|++++.||+|.||.||.|+.+.++-.||+|++... ..+...++.+|+++-..++||||+++++++. +.
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fh-----d~ 94 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFH-----DS 94 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhee-----cc
Confidence 456899999999999999999999999999999998533 2334578999999999999999999999954 44
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
...|+++||..+|.+...++..... .+++.....+..|+|.|+.|+|.+ +|+||||||+|+|++..+..|++|
T Consensus 95 ~riyLilEya~~gel~k~L~~~~~~----~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAd 167 (281)
T KOG0580|consen 95 KRIYLILEYAPRGELYKDLQEGRMK----RFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIAD 167 (281)
T ss_pred ceeEEEEEecCCchHHHHHHhcccc----cccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccC
Confidence 7899999999999999999854432 488888999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 935 (1009)
||.+..-. .......+||..|.+||...+..++...|+|++|++.||++.|.+||+++. .+..+.++..
T Consensus 168 fGwsV~~p----------~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~etYkrI~k 236 (281)
T KOG0580|consen 168 FGWSVHAP----------SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSETYKRIRK 236 (281)
T ss_pred CCceeecC----------CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHHHHHHHHH
Confidence 99886432 244556899999999999999999999999999999999999999998765 3233333322
Q ss_pred HhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 936 RALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 936 ~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
.. +..+. ....+..+++.+|+..+|.+|.+..|+++.
T Consensus 237 ~~-------~~~p~-----------------~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 237 VD-------LKFPS-----------------TISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred cc-------ccCCc-----------------ccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 21 11111 112346799999999999999999999864
No 46
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.2e-38 Score=325.22 Aligned_cols=269 Identities=24% Similarity=0.305 Sum_probs=202.1
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALV 781 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 781 (1009)
.|...+.+|.|+||.||+|...++++.||||++-.+. +--.+|+++|+.++|||||++.-++......+.-...+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~----r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK----RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC----CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 5666789999999999999999999999999874322 233579999999999999999988776422223456789
Q ss_pred EeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCC-CceEEecccccc
Q 047768 782 YEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGLAK 860 (1009)
Q Consensus 782 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~-~~~kl~DfGla~ 860 (1009)
||||+. +|.++++..... ...++...++-+.+|+.+|++|||+. +|+||||||.|+|+|.+ |.+||||||.|+
T Consensus 101 leymP~-tL~~~~r~~~~~--~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTRA--NQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHhchH-HHHHHHHHHhhc--CCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcce
Confidence 999965 999998853111 12388888999999999999999998 99999999999999977 899999999999
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhcc
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
.+..+ ........|..|+|||.+.+. .|+.+.||||.|||+.||+-|++-|... +....+.++.+....
T Consensus 175 ~L~~~---------epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~-s~~dQL~eIik~lG~ 244 (364)
T KOG0658|consen 175 VLVKG---------EPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGD-SSVDQLVEIIKVLGT 244 (364)
T ss_pred eeccC---------CCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCC-CHHHHHHHHHHHhCC
Confidence 88654 223456778999999998884 7899999999999999999999988753 222334444433222
Q ss_pred chhhhc----------cCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 940 EKVMEI----------VDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 940 ~~~~~~----------~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
+...++ ..+.+...+-. .........+.++++.++++++|.+|.++.|++.
T Consensus 245 Pt~e~I~~mn~~y~~~~~p~ik~~~~~-----~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 245 PTREDIKSMNPNYTEFKFPQIKAHPWH-----KVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred CCHHHHhhcCcccccccCcccccccce-----eecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 111111 11111111110 0122233456789999999999999999999875
No 47
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.1e-37 Score=334.78 Aligned_cols=256 Identities=23% Similarity=0.311 Sum_probs=199.8
Q ss_pred HHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCC
Q 047768 698 KATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKG 774 (1009)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 774 (1009)
...++|+....||+|+||+||.|+-+.+|..+|+|+++... ....+.+..|-++|...++|.||+++-. |++
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYs-----FQD 212 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYS-----FQD 212 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEE-----ecC
Confidence 34578999999999999999999999999999999997543 3345678899999999999999999876 566
Q ss_pred CceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEe
Q 047768 775 VDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 854 (1009)
Q Consensus 775 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~ 854 (1009)
.++.|+||||++||++..+|.+.+. +++..+..++.+++-|+..+|.. |||||||||+|+|||..|++||+
T Consensus 213 ~~~LYLiMEylPGGD~mTLL~~~~~------L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLS 283 (550)
T KOG0605|consen 213 KEYLYLIMEYLPGGDMMTLLMRKDT------LTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLS 283 (550)
T ss_pred CCeeEEEEEecCCccHHHHHHhcCc------CchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeec
Confidence 6899999999999999999988764 99999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCCCC----------------ccccC-----------------------CccccccccccccCccccCCC
Q 047768 855 DFGLAKFLSASPLGN----------------VVETP-----------------------SSSIGVKGTIGYVAPEYGLGG 895 (1009)
Q Consensus 855 DfGla~~~~~~~~~~----------------~~~~~-----------------------~~~~~~~gt~~y~aPE~~~~~ 895 (1009)
|||++.-+....... ..+.+ ......+|||.|||||++.+.
T Consensus 284 DFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~k 363 (550)
T KOG0605|consen 284 DFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGK 363 (550)
T ss_pred cccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcC
Confidence 999996432210000 00000 001134699999999999999
Q ss_pred CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHH
Q 047768 896 EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKT 975 (1009)
Q Consensus 896 ~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l 975 (1009)
.|+..+|.||+|||+|||+.|.+||.+.... ....++..- ...+.. |. ..++..+..++
T Consensus 364 gY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~-~T~rkI~nw----------r~~l~f-P~---------~~~~s~eA~DL 422 (550)
T KOG0605|consen 364 GYGKECDWWSLGCIMYEMLVGYPPFCSETPQ-ETYRKIVNW----------RETLKF-PE---------EVDLSDEAKDL 422 (550)
T ss_pred CCCccccHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHH----------hhhccC-CC---------cCcccHHHHHH
Confidence 9999999999999999999999999754322 111111110 001111 11 11122456689
Q ss_pred HhhccCCCCCCCCC
Q 047768 976 GVACSIESPFDRME 989 (1009)
Q Consensus 976 ~~~cl~~dp~~Rpt 989 (1009)
+.+|+. ||+.|.-
T Consensus 423 I~rll~-d~~~RLG 435 (550)
T KOG0605|consen 423 ITRLLC-DPENRLG 435 (550)
T ss_pred HHHHhc-CHHHhcC
Confidence 999999 9999986
No 48
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-37 Score=326.56 Aligned_cols=262 Identities=25% Similarity=0.336 Sum_probs=201.8
Q ss_pred HHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--------------cchHHHHHHHHHHHhcCCCCcceE
Q 047768 698 KATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--------------GGSKSFAAECEALRSIRHRNLIKI 763 (1009)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~niv~l 763 (1009)
...++|++.+.||+|.||.|-+|....+++.||||++..... ...+...+||.+|+++.|||||++
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 446789999999999999999999999999999999953211 112578899999999999999999
Q ss_pred EeeeeccccCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCce
Q 047768 764 VTICSSIDFKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNV 843 (1009)
Q Consensus 764 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Ni 843 (1009)
+.+-.+ +..+..|+|+|||..|.+...-... ..+++.+++++++++..||+|||.+ +||||||||+|+
T Consensus 174 iEvLDD---P~s~~~YlVley~s~G~v~w~p~d~------~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNL 241 (576)
T KOG0585|consen 174 IEVLDD---PESDKLYLVLEYCSKGEVKWCPPDK------PELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNL 241 (576)
T ss_pred EEeecC---cccCceEEEEEeccCCccccCCCCc------ccccHHHHHHHHHHHHHHHHHHHhc---Ceeccccchhhe
Confidence 998765 4567899999999988774432211 1289999999999999999999999 999999999999
Q ss_pred eeCCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCC----CCCcccchHHHHHHHHHHhCCCC
Q 047768 844 LLDHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGE----ASMRGGVYSYGILLLEIFTRRRP 919 (1009)
Q Consensus 844 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwS~Gvvl~elltg~~p 919 (1009)
|++++|+|||+|||.+.....+...... .......||+.|||||...++. .+.+.||||+||+||.|+.|+.|
T Consensus 242 Ll~~~g~VKIsDFGVs~~~~~~~~~~~d---~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~P 318 (576)
T KOG0585|consen 242 LLSSDGTVKISDFGVSNEFPQGSDEGSD---DQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLP 318 (576)
T ss_pred EEcCCCcEEeeccceeeecccCCccccH---HHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCC
Confidence 9999999999999999877544221111 1222367999999999877732 37889999999999999999999
Q ss_pred CcccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 047768 920 TESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKL 997 (1009)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L 997 (1009)
|...+ ..+... .++..-+.. |. ..+.-+++.+++.++++.||+.|.+..+|....
T Consensus 319 F~~~~-----~~~l~~--------KIvn~pL~f-P~---------~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp 373 (576)
T KOG0585|consen 319 FFDDF-----ELELFD--------KIVNDPLEF-PE---------NPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP 373 (576)
T ss_pred cccch-----HHHHHH--------HHhcCcccC-CC---------cccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence 96421 111111 111111111 10 012334677999999999999999999987654
No 49
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.6e-37 Score=317.49 Aligned_cols=280 Identities=23% Similarity=0.354 Sum_probs=207.9
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCC-cceEEeeeeccc-cCCC
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRN-LIKIVTICSSID-FKGV 775 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~-~~~~ 775 (1009)
...|...++||+|+||+||+|+.+.+|+.||+|++....+ +......+|+.+++.++|+| |+++++++.... +...
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 3456667889999999999999999999999999976644 35667889999999999999 999999987642 2334
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
...++|+||++ -+|.+|+....... ..++...++.+++|++.|++|||++ +|+||||||.||+|+++|.+||+|
T Consensus 90 ~~l~lvfe~~d-~DL~~ymd~~~~~~--~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaD 163 (323)
T KOG0594|consen 90 GKLYLVFEFLD-RDLKKYMDSLPKKP--QGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLAD 163 (323)
T ss_pred ceEEEEEEeec-ccHHHHHHhccccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeec
Confidence 47889999995 59999998866321 2367788999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHH
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFA 934 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 934 (1009)
||+|+...... ...+..++|..|+|||++.+. .|+...||||+||+++||++++.-|....+. ..+..+.
T Consensus 164 FGlAra~~ip~--------~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~-~ql~~If 234 (323)
T KOG0594|consen 164 FGLARAFSIPM--------RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEI-DQLFRIF 234 (323)
T ss_pred cchHHHhcCCc--------ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHH-HHHHHHH
Confidence 99999654221 223456789999999999887 7899999999999999999998888754431 1222222
Q ss_pred HHh-cc--ch---hhhccCCCCCChhhhhhhccccccH--HHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 935 KRA-LP--EK---VMEIVDPSLLPLEEERTNSRRVRNE--ECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 935 ~~~-~~--~~---~~~~~d~~l~~~~~~r~~~~~~~~~--~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
+.. .| +. +..+.+-.. ..+ .+......... .-.....+++.+|++++|+.|.|++.+++.
T Consensus 235 ~~lGtP~e~~Wp~v~~~~~~k~-~f~-~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 235 RLLGTPNEKDWPGVSSLPDYKA-PFP-KWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred HHcCCCCccCCCCccccccccc-cCc-CCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 211 11 11 111111111 000 00000000000 001356799999999999999999999875
No 50
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-37 Score=353.94 Aligned_cols=271 Identities=22% Similarity=0.275 Sum_probs=214.0
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcC-CCCcceEEe-eeeccccCC-Cce
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIR-HRNLIKIVT-ICSSIDFKG-VDF 777 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~-~~~~~~~~~-~~~ 777 (1009)
.++++.+.|.+|||+.||.|++...|..||+|++-..++..-..+.+||++|++++ |+|||.+++ ......... ..+
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 35667789999999999999998777999999987776666788999999999996 999999999 333222222 467
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
+++.||||++|+|-|++..+... .+++.++++|+.|+++|+++||.. +|+|||||||.+||||+.++..||||||
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~----~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFG 191 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQT----RLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFG 191 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhc----cCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccc
Confidence 89999999999999999877653 399999999999999999999985 7789999999999999999999999999
Q ss_pred cccccCCCCC-CCccccCCccccccccccccCccc---cCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHH
Q 047768 858 LAKFLSASPL-GNVVETPSSSIGVKGTIGYVAPEY---GLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEF 933 (1009)
Q Consensus 858 la~~~~~~~~-~~~~~~~~~~~~~~gt~~y~aPE~---~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~ 933 (1009)
.|.-...... ......-.......-|+.|+|||. ..+..+++|+|||++||+||.|+....||+....
T Consensus 192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~-------- 263 (738)
T KOG1989|consen 192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK-------- 263 (738)
T ss_pred ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc--------
Confidence 9975433221 000000011112346899999996 4667889999999999999999999999984311
Q ss_pred HHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 047768 934 AKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQN 1003 (1009)
Q Consensus 934 ~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~~ 1003 (1009)
..+++..+...+ ...+...+..++..|++.+|.+||++.+|+..+.++...
T Consensus 264 ---------laIlng~Y~~P~----------~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 264 ---------LAILNGNYSFPP----------FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred ---------eeEEeccccCCC----------CccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 122332222111 125567789999999999999999999999999887653
No 51
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.1e-36 Score=333.30 Aligned_cols=251 Identities=22% Similarity=0.300 Sum_probs=197.7
Q ss_pred CccCCcccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 703 FSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
|...+.||+|+||+||+|.+..+++.||||++..... .....+.+|++++++++|++|+++.+++.. ....+
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~-----~~~~~ 76 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYET-----KDALC 76 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEcc-----CCeEE
Confidence 6678899999999999999998999999999864322 223467889999999999999999988654 36789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+||||+++|+|.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++
T Consensus 77 lv~e~~~~g~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~ 149 (285)
T cd05631 77 LVLTIMNGGDLKFHIYNMGN----PGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLA 149 (285)
T ss_pred EEEEecCCCcHHHHHHhhCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 99999999999988865432 1388999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhcc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
+...... ......||..|+|||++.+..++.++|||||||++|||++|+.||....... ..... .....
T Consensus 150 ~~~~~~~---------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-~~~~~-~~~~~ 218 (285)
T cd05631 150 VQIPEGE---------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV-KREEV-DRRVK 218 (285)
T ss_pred EEcCCCC---------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch-hHHHH-HHHhh
Confidence 8654321 1123568999999999999999999999999999999999999997532211 01111 11000
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRME-----MTDVVV 995 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt-----~~evl~ 995 (1009)
..... ........+.+++.+|++.||++||+ ++|+++
T Consensus 219 ~~~~~-------------------~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 219 EDQEE-------------------YSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred ccccc-------------------CCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 00000 00112345779999999999999997 777776
No 52
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.5e-36 Score=335.86 Aligned_cols=267 Identities=23% Similarity=0.375 Sum_probs=200.4
Q ss_pred ccCccCCcccccCCceEEEEEEec----------------CCeEEEEEEeeccccc-chHHHHHHHHHHHhcCCCCcceE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHE----------------NGMLVAVKVINLEQKG-GSKSFAAECEALRSIRHRNLIKI 763 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~----------------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l 763 (1009)
++|.+.++||+|+||.||+|.+.. ++..||+|++...... ....+.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 578889999999999999998642 3457999998654322 24578899999999999999999
Q ss_pred EeeeeccccCCCceEEEEEeccCCCCHHHHHhccCCC-------------CCccCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 047768 764 VTICSSIDFKGVDFKALVYEYMQNGSLEEWLHQRDDQ-------------LGICNLSLIQRLNIVIDVASAVEYLHHHCQ 830 (1009)
Q Consensus 764 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-------------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ 830 (1009)
++++... ...++||||+++|+|.+++...... .....+++.++..++.|++.|++|||+.
T Consensus 85 ~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-- 157 (304)
T cd05096 85 LGVCVDE-----DPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL-- 157 (304)
T ss_pred EEEEecC-----CceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC--
Confidence 9997643 5689999999999999998654211 0113478889999999999999999999
Q ss_pred CCceecCCCCCceeeCCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHH
Q 047768 831 PPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILL 910 (1009)
Q Consensus 831 ~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl 910 (1009)
+|+||||||+||+++.++.+||+|||+++........ .......++..|+|||++.++.++.++||||||+++
T Consensus 158 -~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l 230 (304)
T cd05096 158 -NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYY------RIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTL 230 (304)
T ss_pred -CccccCcchhheEEcCCccEEECCCccceecccCcee------EecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHH
Confidence 9999999999999999999999999999865432210 111223457899999999989999999999999999
Q ss_pred HHHHh--CCCCCcccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCC
Q 047768 911 LEIFT--RRRPTESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRM 988 (1009)
Q Consensus 911 ~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rp 988 (1009)
|||++ +..||...... .................. ......++..+.+++.+||+.||++||
T Consensus 231 ~el~~~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~li~~cl~~~p~~RP 293 (304)
T cd05096 231 WEILMLCKEQPYGELTDE--QVIENAGEFFRDQGRQVY---------------LFRPPPCPQGLYELMLQCWSRDCRERP 293 (304)
T ss_pred HHHHHccCCCCCCcCCHH--HHHHHHHHHhhhcccccc---------------ccCCCCCCHHHHHHHHHHccCCchhCc
Confidence 99997 55677643221 111111111100000000 001113445788999999999999999
Q ss_pred CHHHHHHHHH
Q 047768 989 EMTDVVVKLC 998 (1009)
Q Consensus 989 t~~evl~~L~ 998 (1009)
|++||.+.|+
T Consensus 294 s~~~i~~~l~ 303 (304)
T cd05096 294 SFSDIHAFLT 303 (304)
T ss_pred CHHHHHHHHh
Confidence 9999998875
No 53
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.5e-36 Score=337.61 Aligned_cols=200 Identities=26% Similarity=0.372 Sum_probs=174.9
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
.++|++.+.||+|+||.||+|+++.++..||+|+++.... .....+.+|++++++++||||+++++++... ...
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 78 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-----GEI 78 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC-----CEE
Confidence 4689999999999999999999999999999999875432 2245789999999999999999999987543 678
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
++||||+++|+|.+++.... .+++..+..++.|++.|+.|||++. +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 150 (331)
T cd06649 79 SICMEHMDGGSLDQVLKEAK------RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGV 150 (331)
T ss_pred EEEeecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcc
Confidence 99999999999999998754 2889999999999999999999852 699999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcc
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTES 922 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~ 922 (1009)
++..... ......||..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 151 ~~~~~~~----------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 151 SGQLIDS----------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred ccccccc----------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 8765332 11234689999999999999999999999999999999999999964
No 54
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-38 Score=347.22 Aligned_cols=256 Identities=25% Similarity=0.410 Sum_probs=209.4
Q ss_pred CccCCcccccCCceEEEEEEecCCe----EEEEEEeeccc-ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 703 FSSSNTIGRGSFGFVYKGVLHENGM----LVAVKVINLEQ-KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~~~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
....++||+|+||+||+|.|...|+ +||+|++.... .+..+++.+|+-+|.+++|||+++++|+|.. ..
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~------s~ 771 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCML------ST 771 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhccc------ch
Confidence 3446789999999999999986654 68999885432 3346789999999999999999999999975 34
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
+.+|++|++.|+|.+|++.++.. +.....+.|..|||+||.|||++ ++|||||.++||||.+-..+||.|||
T Consensus 772 ~qlvtq~mP~G~LlDyvr~hr~~-----igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfg 843 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVREHRDN-----IGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFG 843 (1177)
T ss_pred HHHHHHhcccchHHHHHHHhhcc-----ccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecc
Confidence 78999999999999999998764 88899999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHH
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKR 936 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 936 (1009)
+|+........ ....+..-.+.|||=|.+....|+.++|||||||++||++| |..|+..+..+ +
T Consensus 844 la~ll~~d~~e------y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~-----e---- 908 (1177)
T KOG1025|consen 844 LAKLLAPDEKE------YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE-----E---- 908 (1177)
T ss_pred hhhccCccccc------ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH-----H----
Confidence 99988764321 11222334678999999999999999999999999999999 99998754322 1
Q ss_pred hccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 047768 937 ALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQ 1002 (1009)
Q Consensus 937 ~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~ 1002 (1009)
+.+++..-- +...+.-|...++.++.+||..|++.||+++++...+.+..+
T Consensus 909 -----I~dlle~ge----------RLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 909 -----IPDLLEKGE----------RLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred -----hhHHHhccc----------cCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence 222221111 112334577789999999999999999999999999887654
No 55
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.3e-36 Score=345.16 Aligned_cols=264 Identities=23% Similarity=0.358 Sum_probs=202.4
Q ss_pred hccCccCCcccccCCceEEEEEEe-----cCCeEEEEEEeecccc-cchHHHHHHHHHHHhc-CCCCcceEEeeeecccc
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLH-----ENGMLVAVKVINLEQK-GGSKSFAAECEALRSI-RHRNLIKIVTICSSIDF 772 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 772 (1009)
.++|++.+.||+|+||.||+|++. .++..||||+++.... ...+.+.+|+++++.+ +||||++++++|...
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~-- 111 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVG-- 111 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC--
Confidence 457889999999999999999752 4567899999864332 2345788999999999 899999999997653
Q ss_pred CCCceEEEEEeccCCCCHHHHHhccCCC----------------------------------------------------
Q 047768 773 KGVDFKALVYEYMQNGSLEEWLHQRDDQ---------------------------------------------------- 800 (1009)
Q Consensus 773 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~---------------------------------------------------- 800 (1009)
...++||||+++|+|.++++.....
T Consensus 112 ---~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 112 ---GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred ---CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 6789999999999999999754310
Q ss_pred -----------------CCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccC
Q 047768 801 -----------------LGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLS 863 (1009)
Q Consensus 801 -----------------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~ 863 (1009)
.....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 265 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIR 265 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceecc
Confidence 0012478899999999999999999998 99999999999999999999999999998664
Q ss_pred CCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhccchh
Q 047768 864 ASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRALPEKV 942 (1009)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 942 (1009)
..... .......++..|+|||++.+..++.++|||||||++|||++ |..||....... ...+..
T Consensus 266 ~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-~~~~~~-------- 330 (375)
T cd05104 266 NDSNY------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-KFYKMI-------- 330 (375)
T ss_pred Ccccc------cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-HHHHHH--------
Confidence 32110 01112335678999999999999999999999999999998 888886432211 111111
Q ss_pred hhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 047768 943 MEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHA 1000 (1009)
Q Consensus 943 ~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i 1000 (1009)
....... .+...+.++.+++.+||+.||++||++.||++.|++.
T Consensus 331 ----~~~~~~~----------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 331 ----KEGYRML----------SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred ----HhCccCC----------CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 1000000 0001234678999999999999999999999999863
No 56
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2e-36 Score=332.62 Aligned_cols=274 Identities=21% Similarity=0.319 Sum_probs=200.4
Q ss_pred ccCccCCcccccCCceEEEEEEec-CCeEEEEEEeecccc--cchHHHHHHHHHHHhc---CCCCcceEEeeeeccccCC
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHE-NGMLVAVKVINLEQK--GGSKSFAAECEALRSI---RHRNLIKIVTICSSIDFKG 774 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~ 774 (1009)
++|++.+.||+|+||+||+|++.. +++.||||+++.... .....+.+|+.+++.+ +||||++++++|.......
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 368899999999999999999853 578899999865432 2234566788877766 6999999999986543444
Q ss_pred CceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEe
Q 047768 775 VDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 854 (1009)
Q Consensus 775 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~ 854 (1009)
....++||||++ ++|.+++...... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~----~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~ 152 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEP----GVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 152 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEc
Confidence 567899999996 6999999764422 388999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHH
Q 047768 855 DFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFA 934 (1009)
Q Consensus 855 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 934 (1009)
|||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .+....
T Consensus 153 Dfg~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~-~~~~i~ 222 (290)
T cd07862 153 DFGLARIYSFQ---------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKIL 222 (290)
T ss_pred cccceEeccCC---------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHH
Confidence 99999865432 12224568999999999999999999999999999999999999997533211 111111
Q ss_pred HHh---ccchhhh---ccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 935 KRA---LPEKVME---IVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 935 ~~~---~~~~~~~---~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
... .++.... .....+...+..... . ........+.+++.+|++.||++|||+.|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 223 DVIGLPGEEDWPRDVALPRQAFHSKSAQPIE--K-FVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred HHhCCCChhhchhhhcccchhccCCCCCCHH--H-HccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 111 0111100 000001000000000 0 00112345679999999999999999999975
No 57
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.4e-37 Score=315.68 Aligned_cols=247 Identities=24% Similarity=0.352 Sum_probs=205.9
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc---chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG---GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
.+|++.+.||+|.||.|-+|..+..|+.||||.++..... +--.+.+||++|..++||||++++.+ |+..+.
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEV-----FENkdK 127 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEV-----FENKDK 127 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhh-----hcCCce
Confidence 4788889999999999999999889999999998654332 33467899999999999999999988 455688
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
..+||||..+|.|+||+.+++. +++.+..++++||..|+.|+|.+ ++||||||.+|||+|.++++||+|||
T Consensus 128 IvivMEYaS~GeLYDYiSer~~------LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFG 198 (668)
T KOG0611|consen 128 IVIVMEYASGGELYDYISERGS------LSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFG 198 (668)
T ss_pred EEEEEEecCCccHHHHHHHhcc------ccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccc
Confidence 9999999999999999998875 99999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCCCCC-CCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHH
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEA-SMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKR 936 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 936 (1009)
++-.+... ...+.++|++-|.+||++.+.+| ++..|-||+||++|-++.|.+||+..+ ....+++
T Consensus 199 LSNly~~~---------kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D-----hk~lvrQ 264 (668)
T KOG0611|consen 199 LSNLYADK---------KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD-----HKRLVRQ 264 (668)
T ss_pred hhhhhccc---------cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch-----HHHHHHH
Confidence 99877653 34456899999999999999998 789999999999999999999997532 2222222
Q ss_pred hccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 937 ALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 937 ~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
.-....++ | +.+....-++++++..+|++|-|+.+|...
T Consensus 265 Is~GaYrE---------P------------~~PSdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 265 ISRGAYRE---------P------------ETPSDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred hhcccccC---------C------------CCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence 11111111 1 112234578889999999999999998754
No 58
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.4e-36 Score=329.05 Aligned_cols=257 Identities=23% Similarity=0.369 Sum_probs=202.4
Q ss_pred hccCccCCcccccCCceEEEEEEe---cCCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCC
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLH---ENGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 775 (1009)
.++|++.+.||+|+||.||+|.++ ..+..||+|+++.... .....+.+|+.++++++||||+++++++.. .
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~ 78 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITR-----G 78 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEec-----C
Confidence 357888999999999999999875 3467899999875432 223578899999999999999999998754 3
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
...++||||+++|+|.+++..... .+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+|++|
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~~-----~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~d 150 (266)
T cd05064 79 NTMMIVTEYMSNGALDSFLRKHEG-----QLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISG 150 (266)
T ss_pred CCcEEEEEeCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECC
Confidence 678999999999999999986543 389999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHH
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFA 934 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~ 934 (1009)
||.+........ .......++..|+|||++.+..++.++|||||||++||+++ |+.||...... ...
T Consensus 151 fg~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~-----~~~ 218 (266)
T cd05064 151 FRRLQEDKSEAI-------YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ-----DVI 218 (266)
T ss_pred Ccccccccccch-------hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-----HHH
Confidence 998765322110 11112345678999999999999999999999999999775 99999754211 111
Q ss_pred HHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 047768 935 KRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHA 1000 (1009)
Q Consensus 935 ~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i 1000 (1009)
.. +.+....+ .+..++..+.+++.+||+.+|++||++.|+.+.|+++
T Consensus 219 ~~--------~~~~~~~~-----------~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 219 KA--------VEDGFRLP-----------APRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HH--------HHCCCCCC-----------CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 11 01100000 1123455688999999999999999999999988764
No 59
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-38 Score=304.61 Aligned_cols=252 Identities=21% Similarity=0.335 Sum_probs=200.9
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc--ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ--KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
.++|++-+.||+|+|+.||++....+|+.+|+|+++... ....+.+.+|+++.+.++||||+++.... .+...
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti-----~~~~~ 84 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEESF 84 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhh-----cccce
Confidence 356777889999999999999999999999999986442 23567899999999999999999999874 44578
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeC---CCCceEEe
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAHVS 854 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~---~~~~~kl~ 854 (1009)
.++|+|+|+|++|..=+-.+. -+++..+-.+.+||++++.|+|.+ +|||||+||+|+++. ..--+|++
T Consensus 85 ~ylvFe~m~G~dl~~eIV~R~------~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~ 155 (355)
T KOG0033|consen 85 HYLVFDLVTGGELFEDIVARE------FYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLA 155 (355)
T ss_pred eEEEEecccchHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeec
Confidence 999999999999975554442 278889999999999999999999 999999999999994 34579999
Q ss_pred ccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHH
Q 047768 855 DFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFA 934 (1009)
Q Consensus 855 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 934 (1009)
|||+|..+..+ ....++.|||+|||||++...+|+..+|||+.||++|-++.|+.||+..... ...
T Consensus 156 ~FGvAi~l~~g---------~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~-----rly 221 (355)
T KOG0033|consen 156 DFGLAIEVNDG---------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-----RLY 221 (355)
T ss_pred ccceEEEeCCc---------cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH-----HHH
Confidence 99999987732 4556789999999999999999999999999999999999999999853322 111
Q ss_pred HHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 935 KRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 935 ~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
++.. ...+++-.+.+. ...++..+++++|+..||++|.|+.|++.
T Consensus 222 e~I~-~g~yd~~~~~w~---------------~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 222 EQIK-AGAYDYPSPEWD---------------TVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred HHHh-ccccCCCCcccC---------------cCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 1111 111111111111 11134568899999999999999998875
No 60
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=2.2e-36 Score=342.69 Aligned_cols=266 Identities=21% Similarity=0.334 Sum_probs=203.1
Q ss_pred HhccCccCCcccccCCceEEEEEEecC-----CeEEEEEEeeccccc-chHHHHHHHHHHHhc-CCCCcceEEeeeeccc
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLHEN-----GMLVAVKVINLEQKG-GSKSFAAECEALRSI-RHRNLIKIVTICSSID 771 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 771 (1009)
..++|++.+.||+|+||.||+|++... +..||||+++..... ....+.+|+++++.+ +|+||++++++|...
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~- 114 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHG- 114 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC-
Confidence 345789999999999999999987533 357999999644322 235688999999999 899999999987543
Q ss_pred cCCCceEEEEEeccCCCCHHHHHhccCCC---------------------------------------------------
Q 047768 772 FKGVDFKALVYEYMQNGSLEEWLHQRDDQ--------------------------------------------------- 800 (1009)
Q Consensus 772 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------------------------------------- 800 (1009)
...++||||+++|+|.++++.....
T Consensus 115 ----~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (374)
T cd05106 115 ----GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSS 190 (374)
T ss_pred ----CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccc
Confidence 6789999999999999998653210
Q ss_pred -------------CCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccCCCCC
Q 047768 801 -------------LGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSASPL 867 (1009)
Q Consensus 801 -------------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 867 (1009)
.....+++.++.+++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.......
T Consensus 191 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~ 267 (374)
T cd05106 191 SSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN 267 (374)
T ss_pred ccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc
Confidence 0112478889999999999999999999 999999999999999999999999999986543211
Q ss_pred CCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhccchhhhcc
Q 047768 868 GNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRALPEKVMEIV 946 (1009)
Q Consensus 868 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 946 (1009)
. .......++..|||||++.+..++.++|||||||++|||++ |+.||....... .......
T Consensus 268 ~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~~~----------- 329 (374)
T cd05106 268 Y------VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYKMVK----------- 329 (374)
T ss_pred e------eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHHHHH-----------
Confidence 0 11112335678999999999999999999999999999998 999997543211 1111110
Q ss_pred CCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 047768 947 DPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHAR 1001 (1009)
Q Consensus 947 d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~ 1001 (1009)
....... +...+.++.+++.+||+.||++||++.||++.|+++.
T Consensus 330 -~~~~~~~----------~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 330 -RGYQMSR----------PDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred -cccCccC----------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 0000000 0011245789999999999999999999999998864
No 61
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-39 Score=366.54 Aligned_cols=480 Identities=29% Similarity=0.391 Sum_probs=266.4
Q ss_pred EEeecCCcccccCccccCCCCCCeeeecCCcCCccCC-ccccCccccccccccccccCCCCCCCCcCCCcCcEEeccccc
Q 047768 75 LDLRNQSIGGILSPYVGNLSFLRYINIADNDFHGEIP-DRIGNLFRLETLVLANNSFSGRIPTNLSHCSKLITFSAHRNN 153 (1009)
Q Consensus 75 l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~ 153 (1009)
+|+++..+. .||..+..-..++.|+++.|-+- ..| +.+.+.-+|+.||||+|+++ ..|..+..+.+|+.|.++.|.
T Consensus 3 vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l-~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~ 79 (1081)
T KOG0618|consen 3 VDASDEQLE-LIPEQILNNEALQILNLRRNSLL-SRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNY 79 (1081)
T ss_pred cccccccCc-ccchhhccHHHHHhhhccccccc-cCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhh
Confidence 344444443 23333333344677777777665 223 23444455777777777776 667777777777777777776
Q ss_pred ccCCCchHHhhhccCCcCeEeecCccCCCCCCcccCCccccceeecccCcccCCCCcccccccccccccccCccCCCCCC
Q 047768 154 LVGEIPEELISRRLFNLQGLSVGDNQLTGQLPASIGNLSALRVIDIRTNRLWGKIPITLSQLTSLAYLHVGDNHFSGTIP 233 (1009)
Q Consensus 154 l~~~~p~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 233 (1009)
+. ..|... ..+.+|++|.|.+|.+. ..|.++..+.+|++|+++.|++ +.+|..+..++.++.+..++|.....++
T Consensus 80 i~-~vp~s~--~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f-~~~Pl~i~~lt~~~~~~~s~N~~~~~lg 154 (1081)
T KOG0618|consen 80 IR-SVPSSC--SNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHF-GPIPLVIEVLTAEEELAASNNEKIQRLG 154 (1081)
T ss_pred Hh-hCchhh--hhhhcchhheeccchhh-cCchhHHhhhcccccccchhcc-CCCchhHHhhhHHHHHhhhcchhhhhhc
Confidence 65 445443 45566666666666666 5666666666666666666666 4666666666666666666662221222
Q ss_pred CcccCCChHHHHHhhCCccCCCCChhhccCCCcccceeccccccCCCCCCCcCccccccccccccccccccccccccccc
Q 047768 234 PSVYNISSLVEIYLYGNRFTGSLPIEIGKNLPNLRNFVIYTNNFTGSLPDSFSNASNLEVLHLAENQFRGQVSINFNGLK 313 (1009)
Q Consensus 234 ~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~f~~l~ 313 (1009)
... ++.++|..|.+.+.++.++. .+.+ .|+|++|.+. -..+.++.+|++|+.+.|++....- ..+
T Consensus 155 ~~~-----ik~~~l~~n~l~~~~~~~i~-~l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls~l~~----~g~ 219 (1081)
T KOG0618|consen 155 QTS-----IKKLDLRLNVLGGSFLIDIY-NLTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLSELEI----SGP 219 (1081)
T ss_pred ccc-----chhhhhhhhhcccchhcchh-hhhe--eeecccchhh---hhhhhhccchhhhhhhhcccceEEe----cCc
Confidence 211 56666666666655555443 1222 3666666665 1234555666666666666654322 234
Q ss_pred ccccccccccccCCCCCCCcchhhhcccccccceEEccCCCCCCcCchhhhhhcccceEEEcCCCccccCCCccccCcCc
Q 047768 314 DLSMLGLATNFLGNGAANDLDFVDLLTNCTKLQYLYLADNGFGGVLPHSIANLSTALIDFNLGKNQIYGTIPPGIANLVN 393 (1009)
Q Consensus 314 ~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~ 393 (1009)
+|+.|+-++|.+..... -.--.+|+++++++|+++ .+|+++..+ .+|+.++..+|+|+ .+|..+...++
T Consensus 220 ~l~~L~a~~n~l~~~~~--------~p~p~nl~~~dis~n~l~-~lp~wi~~~-~nle~l~~n~N~l~-~lp~ri~~~~~ 288 (1081)
T KOG0618|consen 220 SLTALYADHNPLTTLDV--------HPVPLNLQYLDISHNNLS-NLPEWIGAC-ANLEALNANHNRLV-ALPLRISRITS 288 (1081)
T ss_pred chheeeeccCcceeecc--------ccccccceeeecchhhhh-cchHHHHhc-ccceEecccchhHH-hhHHHHhhhhh
Confidence 55555555555542221 011235566666666665 334444444 45666666666664 55555555666
Q ss_pred cCEEEccCCCCCCCCCCCcCCcccccceecccccccCCCCcc-cccccc-cccccccCcccccccCCCCCCCCCcccccc
Q 047768 394 LNSLRMEANRLTGTIPHVIGELKNLQLLHLHANFLQGTIPSS-LGNLTL-LTYLSFGANNLQGNIPFSLGNCKNLMFFFA 471 (1009)
Q Consensus 394 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l 471 (1009)
|+.|.+.+|.+. -+|....+++.|++|+|..|+|. ..|+. +.-+.. |..|+.+.|.+....-..=..++.|+.|++
T Consensus 289 L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~Lyl 366 (1081)
T KOG0618|consen 289 LVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYL 366 (1081)
T ss_pred HHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHH
Confidence 666666666665 45555555666666666666665 33332 222222 555555555555222112233455666666
Q ss_pred CCCCccCCCchhhhhhccceeeEecCCCccCCCCCC-CccCCCCCCeeeccccccCCCccccccCCCCccEEEecCcccc
Q 047768 472 PRNKLTGALPQQILEITTLSLSLDLSDNLLNGSLPL-GVGNLKSLVRLGIARNQFSGQIPVTLGACTSLEYVELQGNSFS 550 (1009)
Q Consensus 472 ~~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 550 (1009)
.+|.++...-+.+.....+. .|+|++|++. ++|. .+.++..|+.|+||+|+|+ .+|.++..+..|+.|...+|+|.
T Consensus 367 anN~Ltd~c~p~l~~~~hLK-VLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~ 443 (1081)
T KOG0618|consen 367 ANNHLTDSCFPVLVNFKHLK-VLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL 443 (1081)
T ss_pred hcCcccccchhhhcccccee-eeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee
Confidence 66666644333333333333 3666666666 3333 3556666666666666666 56666666666666666666666
Q ss_pred cccccccccccccceEcCCCccccccc-ccccccccccCceeccccc
Q 047768 551 GTIPQSLSSLTSIKELDLSQNNFSGQI-PKYLENLSFLQYLNLSYNH 596 (1009)
Q Consensus 551 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~ls~N~ 596 (1009)
..| .+.+++.|+.+|+|.|+|+... |.... -++|++|||++|.
T Consensus 444 -~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p-~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 444 -SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALP-SPNLKYLDLSGNT 487 (1081)
T ss_pred -ech-hhhhcCcceEEecccchhhhhhhhhhCC-CcccceeeccCCc
Confidence 555 5666666666666666666322 32222 2566666666665
No 62
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.6e-36 Score=337.25 Aligned_cols=260 Identities=25% Similarity=0.417 Sum_probs=204.3
Q ss_pred ccCccCCcccccCCceEEEEEEecCCe----EEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCC
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGM----LVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 775 (1009)
.+|+..+.||+|+||.||+|++..++. .||||+++.... ...+.+.+|+.+++.++||||++++|+|..
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~------ 80 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------ 80 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC------
Confidence 478899999999999999999875554 489999864322 234678899999999999999999999864
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
...++|+||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 81 ~~~~~v~e~~~~g~l~~~l~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~D 152 (316)
T cd05108 81 STVQLITQLMPFGCLLDYVREHKD-----NIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITD 152 (316)
T ss_pred CCceeeeecCCCCCHHHHHHhccc-----cCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcc
Confidence 346799999999999999987653 388999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHH
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFA 934 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~ 934 (1009)
||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |+.||..... .++.
T Consensus 153 fG~a~~~~~~~~~------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~-----~~~~ 221 (316)
T cd05108 153 FGLAKLLGADEKE------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-----SEIS 221 (316)
T ss_pred ccccccccCCCcc------eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-----HHHH
Confidence 9999876532110 11112334678999999999999999999999999999998 9999864321 1111
Q ss_pred HHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 047768 935 KRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQNF 1004 (1009)
Q Consensus 935 ~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~~~ 1004 (1009)
. ++...... + ....+...+.+++.+||..+|++||++.+++..+..+.++.
T Consensus 222 ~---------~~~~~~~~-~---------~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 222 S---------ILEKGERL-P---------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred H---------HHhCCCCC-C---------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 1 11000000 0 00122345789999999999999999999999998887654
No 63
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2.3e-36 Score=334.13 Aligned_cols=274 Identities=22% Similarity=0.309 Sum_probs=199.3
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
.++|.+.+.||+|+||+||+|+.+.+++.||||+++.... .....+.+|++++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~~ 78 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHT-----KETL 78 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEec-----CCeE
Confidence 4689999999999999999999998899999999864432 223567889999999999999999998654 3678
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
++||||++ ++|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~ 149 (303)
T cd07869 79 TLVFEYVH-TDLCQYMDKHPG-----GLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGL 149 (303)
T ss_pred EEEEECCC-cCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCc
Confidence 99999995 788888876543 388899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
++...... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....+............
T Consensus 150 ~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 221 (303)
T cd07869 150 ARAKSVPS--------HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVL 221 (303)
T ss_pred ceeccCCC--------ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHh
Confidence 97543211 11223567999999998765 4578899999999999999999999975432111111111110
Q ss_pred ccch---hhhccC-CCCCCh----hhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 938 LPEK---VMEIVD-PSLLPL----EEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 938 ~~~~---~~~~~d-~~l~~~----~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.... ...... +...+. ..................+.+++.+|++.||++|||+.|+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 222 GTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred CCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 0000 000000 000000 000000000000112245679999999999999999999975
No 64
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=9e-37 Score=334.93 Aligned_cols=246 Identities=24% Similarity=0.300 Sum_probs=198.5
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
++|++.+.||+|+||.||+|.++.+++.||+|+++.... ...+.+.+|++++++++||||+++++++.. ...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHD-----QRF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhcc-----CCe
Confidence 368889999999999999999998999999999965422 234568899999999999999999987543 468
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++||||+++|+|.+++..... +++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg 146 (291)
T cd05612 76 LYMLMEYVPGGELFSYLRNSGR------FSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFG 146 (291)
T ss_pred EEEEEeCCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecC
Confidence 8999999999999999987543 88999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .......
T Consensus 147 ~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~-----~~~~~~i 210 (291)
T cd05612 147 FAKKLRDR-----------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP-----FGIYEKI 210 (291)
T ss_pred cchhccCC-----------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHH
Confidence 99865321 1134689999999999999999999999999999999999999974321 1111111
Q ss_pred ccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHHH
Q 047768 938 LPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRME-----MTDVVVK 996 (1009)
Q Consensus 938 ~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt-----~~evl~~ 996 (1009)
... .. ..+ ......+.+++.+|++.||.+||+ ++|+++.
T Consensus 211 ~~~--------~~-~~~-----------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 211 LAG--------KL-EFP-----------RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred HhC--------Cc-CCC-----------ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 110 00 000 011235679999999999999995 7777653
No 65
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.8e-36 Score=339.38 Aligned_cols=274 Identities=20% Similarity=0.243 Sum_probs=200.6
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc--ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ--KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
+|++.+.||+|+||.||+|+++.+++.||||+++... ......+.+|++++++++||||+++++++...........+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4788899999999999999999899999999986432 22345688999999999999999999987654333445689
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+||||+. ++|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 81 lv~e~~~-~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~ 150 (338)
T cd07859 81 VVFELME-SDLHQVIKAND------DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLA 150 (338)
T ss_pred EEEecCC-CCHHHHHHhcc------cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccc
Confidence 9999995 79999987654 389999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCC--CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG--GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
+........ ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .........
T Consensus 151 ~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~--~~~~~~~~~ 223 (338)
T cd07859 151 RVAFNDTPT-----AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV--HQLDLITDL 223 (338)
T ss_pred cccccccCc-----cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChH--HHHHHHHHH
Confidence 865332110 011234568999999999866 67899999999999999999999999643211 000000000
Q ss_pred c------------cchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 938 L------------PEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 938 ~------------~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
. .......++......+. ............+.+++.+|++.||++|||++|+++.
T Consensus 224 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 224 LGTPSPETISRVRNEKARRYLSSMRKKQPV----PFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred hCCCCHHHHHHhhhhhHHHHHHhhcccCCC----chHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0 00011111100000000 0000000123457899999999999999999999863
No 66
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.4e-36 Score=338.56 Aligned_cols=242 Identities=22% Similarity=0.257 Sum_probs=194.0
Q ss_pred CcccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEe
Q 047768 707 NTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYE 783 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 783 (1009)
+.||+|+||.||+|+.+.+|+.||||+++.... .....+.+|++++++++||||+++++++.. ....++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-----~~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQT-----HDRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEc-----CCEEEEEEe
Confidence 469999999999999998999999999975421 223567789999999999999999988654 368899999
Q ss_pred ccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccC
Q 047768 784 YMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLS 863 (1009)
Q Consensus 784 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~ 863 (1009)
|+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 ~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~ 146 (323)
T cd05571 76 YANGGELFFHLSRER------VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred CCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccc
Confidence 999999999997654 389999999999999999999999 99999999999999999999999999987532
Q ss_pred CCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchhh
Q 047768 864 ASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKVM 943 (1009)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1009)
... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.... .............
T Consensus 147 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~-----~~~~~~~~~~~~~- 212 (323)
T cd05571 147 SDG--------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HEKLFELILMEEI- 212 (323)
T ss_pred cCC--------CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCC-----HHHHHHHHHcCCC-
Confidence 211 12234579999999999999999999999999999999999999996422 1111111111100
Q ss_pred hccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 047768 944 EIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRM-----EMTDVVV 995 (1009)
Q Consensus 944 ~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rp-----t~~evl~ 995 (1009)
..+ .....++.+++.+|++.||++|| ++.|+++
T Consensus 213 --------~~p-----------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 213 --------RFP-----------RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred --------CCC-----------CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 000 11234577999999999999999 7888864
No 67
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2.3e-36 Score=331.27 Aligned_cols=271 Identities=23% Similarity=0.313 Sum_probs=198.9
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
.++|.+.+.||+|+||+||+|..+.+++.||+|+++.... .....+.+|++++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~~ 78 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHT-----ERCL 78 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcC-----CCeE
Confidence 3578999999999999999999998999999999865432 234567899999999999999999998653 3678
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
++||||++ |+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+
T Consensus 79 ~lv~e~~~-~~l~~~l~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~ 149 (288)
T cd07871 79 TLVFEYLD-SDLKQYLDNCGN-----LMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGL 149 (288)
T ss_pred EEEEeCCC-cCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcc
Confidence 99999997 599999876543 378899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
++...... .......|++.|+|||++.+ ..++.++||||+||++|||++|+.||....... .........
T Consensus 150 ~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~ 220 (288)
T cd07871 150 ARAKSVPT--------KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE-ELHLIFRLL 220 (288)
T ss_pred eeeccCCC--------ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHh
Confidence 97543221 11223467899999998865 568999999999999999999999996432111 111111100
Q ss_pred ---ccchhhhccCC-----CCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 938 ---LPEKVMEIVDP-----SLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 938 ---~~~~~~~~~d~-----~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.++....+.+. ...+.....+... .......+..+++.+|++.||.+|||++|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 221 GTPTEETWPGITSNEEFRSYLFPQYRAQPLIN--HAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred CCCChHHhhccccchhhhccccCccCCCchHH--hCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00111111100 0000000000000 00011235679999999999999999999974
No 68
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.9e-36 Score=330.77 Aligned_cols=273 Identities=22% Similarity=0.295 Sum_probs=200.0
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
++|.+.+.||+|+||+||+|+++.+++.||||+++.... ...+.+.+|++++++++||||+++++++.. .+..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 75 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRR-----RGKL 75 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEec-----CCEE
Confidence 368899999999999999999998999999999865422 234678899999999999999999988654 3678
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
++||||++++.+..+.... . .+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~lv~e~~~~~~l~~~~~~~-~-----~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~ 146 (287)
T cd07848 76 YLVFEYVEKNMLELLEEMP-N-----GVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGF 146 (287)
T ss_pred EEEEecCCCCHHHHHHhcC-C-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccC
Confidence 9999999987776554332 2 388999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHH--
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKR-- 936 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~-- 936 (1009)
++....... .......||+.|+|||++.+..++.++||||+||++|||++|+.||......+ ........
T Consensus 147 ~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~ 218 (287)
T cd07848 147 ARNLSEGSN-------ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEID-QLFTIQKVLG 218 (287)
T ss_pred ccccccccc-------ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhhC
Confidence 987643211 11223568999999999999999999999999999999999999997533211 01111100
Q ss_pred hccchhhhcc--CCCCC----ChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 937 ALPEKVMEIV--DPSLL----PLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 937 ~~~~~~~~~~--d~~l~----~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
..+....... ++... +....+.............++.+++.+|++.||++|||++|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 219 PLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred CCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0111100000 00000 00000000000000113356889999999999999999999875
No 69
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-37 Score=338.22 Aligned_cols=244 Identities=23% Similarity=0.293 Sum_probs=198.1
Q ss_pred HhccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCC
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKG 774 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 774 (1009)
..++|...++||+|.||.|++|+.+.+++.+|||+++... .++.+..+.|.+++... +||.+++++.+ ++.
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~-----fQT 440 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSC-----FQT 440 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccc-----ccc
Confidence 3568999999999999999999999999999999997653 34567788899998877 59999999987 455
Q ss_pred CceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEe
Q 047768 775 VDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 854 (1009)
Q Consensus 775 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~ 854 (1009)
.++.|.||||+.||++..+.+.. .+++..+.-+|..++.||.|||++ +|||||||.+|||+|.+|.+||+
T Consensus 441 ~~~l~fvmey~~Ggdm~~~~~~~-------~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiA 510 (694)
T KOG0694|consen 441 KEHLFFVMEYVAGGDLMHHIHTD-------VFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIA 510 (694)
T ss_pred CCeEEEEEEecCCCcEEEEEecc-------cccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEec
Confidence 68999999999999944333322 299999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHH
Q 047768 855 DFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFA 934 (1009)
Q Consensus 855 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 934 (1009)
|||+++.--. ......+++||+.|||||++.+..|+.++|-|||||++|||+.|..||.....+
T Consensus 511 DFGlcKe~m~--------~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe-------- 574 (694)
T KOG0694|consen 511 DFGLCKEGMG--------QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE-------- 574 (694)
T ss_pred ccccccccCC--------CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH--------
Confidence 9999985321 224556799999999999999999999999999999999999999999843222
Q ss_pred HHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCH
Q 047768 935 KRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEM 990 (1009)
Q Consensus 935 ~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~ 990 (1009)
+++|..+..++. .+.-...+...++.+.+..+|++|.-+
T Consensus 575 ---------e~FdsI~~d~~~--------yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 575 ---------EVFDSIVNDEVR--------YPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred ---------HHHHHHhcCCCC--------CCCcccHHHHHHHHHHhccCcccccCC
Confidence 111211111110 011223456788889999999999866
No 70
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.7e-36 Score=337.25 Aligned_cols=200 Identities=26% Similarity=0.385 Sum_probs=174.4
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
.++|++.++||+|+||.||+|.+..++..||+|+++.... .....+.+|++++++++||||+++++++... ...
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 78 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-----GEI 78 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEEC-----CEE
Confidence 4689999999999999999999998999999999875432 2245788999999999999999999997653 678
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
++||||+++|+|.+++.... .+++..+..++.+++.|+.|||+.. +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~ 150 (333)
T cd06650 79 SICMEHMDGGSLDQVLKKAG------RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGV 150 (333)
T ss_pred EEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCc
Confidence 99999999999999997654 2788999999999999999999742 799999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcc
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTES 922 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~ 922 (1009)
+...... ......|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 151 ~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 151 SGQLIDS----------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred chhhhhh----------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 9755321 11234689999999999998999999999999999999999999874
No 71
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.4e-36 Score=340.26 Aligned_cols=254 Identities=21% Similarity=0.260 Sum_probs=201.5
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
++|++.+.||+|+||.||+|++..+++.||||+++... ......+.+|+++++.++||||+++++++.. ...
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-----~~~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQD-----DEY 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEc-----CCE
Confidence 36888999999999999999999889999999997542 2234568889999999999999999998654 367
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++||||+++|+|.+++.... .+++.++..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg 146 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLNNLG------VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFG 146 (333)
T ss_pred EEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCc
Confidence 899999999999999997654 388999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
+++.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+.....
T Consensus 147 ~a~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-----~~~~~~i 210 (333)
T cd05600 147 LSKGIVT-----------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTP-----NETWENL 210 (333)
T ss_pred CCccccc-----------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCH-----HHHHHHH
Confidence 9975432 12235689999999999999999999999999999999999999964321 1111100
Q ss_pred ccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 938 LPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 938 ~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
.. ....+.. +... ........++.+++.+|+..+|.+||++.|+++.
T Consensus 211 ~~--~~~~~~~---~~~~-------~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 211 KY--WKETLQR---PVYD-------DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred Hh--ccccccC---CCCC-------ccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 00 0000000 0000 0001233457789999999999999999999864
No 72
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.2e-36 Score=327.80 Aligned_cols=251 Identities=31% Similarity=0.509 Sum_probs=191.6
Q ss_pred cCCcccccCCceEEEEEEe----cCCeEEEEEEeeccccc-chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 705 SSNTIGRGSFGFVYKGVLH----ENGMLVAVKVINLEQKG-GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 705 ~~~~lg~G~~g~V~~~~~~----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
+.+.||.|.||.||+|.++ ..+..|+||+++..... ..+.+.+|++.+++++||||++++|+|... ...+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~-----~~~~ 77 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIEN-----EPLF 77 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESS-----SSEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccc-----cccc
Confidence 3578999999999999998 34678999999653322 357899999999999999999999998732 4589
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+|+||+++|+|.+++..... ..+++.++..|+.|+++||+|||++ +++|+||+++||++++++.+||+|||++
T Consensus 78 lv~e~~~~g~L~~~L~~~~~----~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~ 150 (259)
T PF07714_consen 78 LVMEYCPGGSLDDYLKSKNK----EPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLS 150 (259)
T ss_dssp EEEE--TTEBHHHHHHHTCT----TTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTG
T ss_pred cccccccccccccccccccc----ccccccccccccccccccccccccc---cccccccccccccccccccccccccccc
Confidence 99999999999999998721 2489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
+........ .......+...|+|||.+.+..++.++||||||+++||+++ |+.||.... ...+.....
T Consensus 151 ~~~~~~~~~------~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~-----~~~~~~~~~ 219 (259)
T PF07714_consen 151 RPISEKSKY------KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD-----NEEIIEKLK 219 (259)
T ss_dssp EETTTSSSE------EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC-----HHHHHHHHH
T ss_pred ccccccccc------ccccccccccccccccccccccccccccccccccccccccccccccccccc-----ccccccccc
Confidence 876322110 11222446789999999999999999999999999999999 788876442 122221110
Q ss_pred cchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 047768 939 PEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKL 997 (1009)
Q Consensus 939 ~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L 997 (1009)
..... .....++..+.+++.+||+.+|++||++.|++++|
T Consensus 220 ~~~~~-------------------~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 220 QGQRL-------------------PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TTEET-------------------TSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ccccc-------------------eeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 00000 01112345688999999999999999999999876
No 73
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=6.9e-36 Score=326.01 Aligned_cols=259 Identities=24% Similarity=0.369 Sum_probs=200.9
Q ss_pred ccCccCCcccccCCceEEEEEEecCCe----EEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCC
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGM----LVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 775 (1009)
++|.+.+.||+|+||+||+|.+..++. .||+|.+..... .....+..|+..+++++||||+++++++..
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~------ 80 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG------ 80 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC------
Confidence 468888999999999999999976665 477777743221 123567788888999999999999998642
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
...++++||+++|+|.+++..... .+++..+..++.|++.|++|||++ +++||||||+||++++++.+|++|
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~D 152 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHRD-----SLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIAD 152 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcC
Confidence 346789999999999999986543 389999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHH
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFA 934 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~ 934 (1009)
||+++....... ........++..|+|||++.++.++.++|||||||++||+++ |+.||...... ..
T Consensus 153 fg~~~~~~~~~~------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~-----~~- 220 (279)
T cd05111 153 FGVADLLYPDDK------KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH-----EV- 220 (279)
T ss_pred CccceeccCCCc------ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-----HH-
Confidence 999986543211 111223457789999999999999999999999999999998 99998643211 11
Q ss_pred HHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 047768 935 KRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQN 1003 (1009)
Q Consensus 935 ~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~~ 1003 (1009)
.+++....... ....+...+.+++.+||..+|+.|||+.|+++.+..+.++
T Consensus 221 --------~~~~~~~~~~~----------~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 221 --------PDLLEKGERLA----------QPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred --------HHHHHCCCcCC----------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 11111100000 0011234567899999999999999999999999887664
No 74
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.7e-36 Score=338.48 Aligned_cols=246 Identities=22% Similarity=0.261 Sum_probs=198.7
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCc
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVD 776 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 776 (1009)
.++|.+.+.||+|+||.||+|+++.+++.||||+++... ....+.+.+|++++++++||||+++++++.. ..
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~ 91 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQD-----EN 91 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc-----CC
Confidence 357889999999999999999999899999999996432 1234568899999999999999999998654 36
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
..++||||+++|+|.+++..... +++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 92 ~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Df 162 (329)
T PTZ00263 92 RVYFLLEFVVGGELFTHLRKAGR------FPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDF 162 (329)
T ss_pred EEEEEEcCCCCChHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeec
Confidence 78999999999999999987542 78889999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHH
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKR 936 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 936 (1009)
|+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+....
T Consensus 163 g~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~-----~~~~~~~ 226 (329)
T PTZ00263 163 GFAKKVPDR-----------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT-----PFRIYEK 226 (329)
T ss_pred cCceEcCCC-----------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC-----HHHHHHH
Confidence 999865432 113468999999999999999999999999999999999999996421 1111111
Q ss_pred hccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 047768 937 ALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRME-----MTDVVV 995 (1009)
Q Consensus 937 ~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt-----~~evl~ 995 (1009)
... ... ..+. ....++.+++.+|++.||.+||+ ++|++.
T Consensus 227 i~~--------~~~-~~p~-----------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 227 ILA--------GRL-KFPN-----------WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred Hhc--------CCc-CCCC-----------CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 111 000 0000 01234679999999999999997 566653
No 75
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=6.7e-36 Score=323.34 Aligned_cols=256 Identities=25% Similarity=0.439 Sum_probs=204.3
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
.+|.+.+.||+|+||.||+|.++.+++.||+|+++... ...+.+.+|++++++++|+||+++++++... ...++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~l 79 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-----PPFYI 79 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCC-----CCcEE
Confidence 46788899999999999999999889999999986432 2346788999999999999999999987543 56799
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
||||+++++|.+++..... ..+++..+..++.|+++|++|||+. +++||||||+||++++++.+||+|||+++
T Consensus 80 v~e~~~~~~L~~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~ 152 (263)
T cd05052 80 ITEFMTYGNLLDYLRECNR----QEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR 152 (263)
T ss_pred EEEeCCCCcHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccc
Confidence 9999999999999976432 2488999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhcc
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
....... .......++..|+|||++.+..++.++|||||||++|||++ |..||.... ..+.....
T Consensus 153 ~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~-----~~~~~~~~-- 218 (263)
T cd05052 153 LMTGDTY-------TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELL-- 218 (263)
T ss_pred cccccee-------eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHH--
Confidence 6643211 11112334678999999999999999999999999999998 899986432 11111111
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHA 1000 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i 1000 (1009)
....... ....++.++.+++.+|++.+|++||++.|++++|+.+
T Consensus 219 -------~~~~~~~----------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 219 -------EKGYRME----------RPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred -------HCCCCCC----------CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 0000000 0112345688999999999999999999999999875
No 76
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1.2e-38 Score=342.71 Aligned_cols=342 Identities=23% Similarity=0.377 Sum_probs=227.1
Q ss_pred CeEEEEEeecCCcc-cccCccccCCCCCCeeeecCCcCCccCCccccCccccccccccccccCCCCCCCCcCCCcCcEEe
Q 047768 70 QRVTKLDLRNQSIG-GILSPYVGNLSFLRYINIADNDFHGEIPDRIGNLFRLETLVLANNSFSGRIPTNLSHCSKLITFS 148 (1009)
Q Consensus 70 ~~v~~l~l~~~~l~-~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 148 (1009)
.-|..+|+++|.++ +..|..+..++++++|.|...++. .+|+.++.|.+|++|.+++|++. .+-.+++.|+.|+.++
T Consensus 7 pFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~ 84 (1255)
T KOG0444|consen 7 PFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVI 84 (1255)
T ss_pred ceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHh
Confidence 46888999999998 578889999999999999999998 99999999999999999999998 6777899999999999
Q ss_pred ccccccc-CCCchHHhhhccCCcCeEeecCccCCCCCCcccCCccccceeecccCcccCCCCcccccccccccccccCcc
Q 047768 149 AHRNNLV-GEIPEELISRRLFNLQGLSVGDNQLTGQLPASIGNLSALRVIDIRTNRLWGKIPITLSQLTSLAYLHVGDNH 227 (1009)
Q Consensus 149 l~~n~l~-~~~p~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 227 (1009)
+.+|++. +.||..+| ++..|+.||||+|+++ ..|..+..-+++-+|+||+|+|..+....|.+|+.|-+||||+|+
T Consensus 85 ~R~N~LKnsGiP~diF--~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~Nr 161 (1255)
T KOG0444|consen 85 VRDNNLKNSGIPTDIF--RLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNR 161 (1255)
T ss_pred hhccccccCCCCchhc--ccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccch
Confidence 9999985 45777775 5888888999999988 778888888888889999998876666677888888888888888
Q ss_pred CCCCCCCcccCCChHHHHHhhCCccCCCCChhhccCCCcccceeccccccCCCCCCCcCccccccccccccccccc-ccc
Q 047768 228 FSGTIPPSVYNISSLVEIYLYGNRFTGSLPIEIGKNLPNLRNFVIYTNNFTGSLPDSFSNASNLEVLHLAENQFRG-QVS 306 (1009)
Q Consensus 228 l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~~ 306 (1009)
+. .+|+.+..|..|++|+|++|.+. ...- ..+..+++|++|++++.+-+- -+|
T Consensus 162 Le-~LPPQ~RRL~~LqtL~Ls~NPL~-hfQL------------------------rQLPsmtsL~vLhms~TqRTl~N~P 215 (1255)
T KOG0444|consen 162 LE-MLPPQIRRLSMLQTLKLSNNPLN-HFQL------------------------RQLPSMTSLSVLHMSNTQRTLDNIP 215 (1255)
T ss_pred hh-hcCHHHHHHhhhhhhhcCCChhh-HHHH------------------------hcCccchhhhhhhcccccchhhcCC
Confidence 87 78888888888888888888765 2111 112234555666665554321 122
Q ss_pred cccccccccccccccccccCCCCCCCcchhhhcccccccceEEccCCCCCCcCchhhhhhcccceEEEcCCCccccCCCc
Q 047768 307 INFNGLKDLSMLGLATNFLGNGAANDLDFVDLLTNCTKLQYLYLADNGFGGVLPHSIANLSTALIDFNLGKNQIYGTIPP 386 (1009)
Q Consensus 307 ~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~ 386 (1009)
.++.++.+|..+|||.|.+.. .|+.+.++++|+.|+||+|+|+ .+.-
T Consensus 216 tsld~l~NL~dvDlS~N~Lp~-------vPecly~l~~LrrLNLS~N~it--------------------------eL~~ 262 (1255)
T KOG0444|consen 216 TSLDDLHNLRDVDLSENNLPI-------VPECLYKLRNLRRLNLSGNKIT--------------------------ELNM 262 (1255)
T ss_pred CchhhhhhhhhccccccCCCc-------chHHHhhhhhhheeccCcCcee--------------------------eeec
Confidence 222222222222222222221 1223334444444444444443 2222
Q ss_pred cccCcCccCEEEccCCCCCCCCCCCcCCcccccceeccccccc-CCCCcccccccccccccccCcccccccCCCCCCCCC
Q 047768 387 GIANLVNLNSLRMEANRLTGTIPHVIGELKNLQLLHLHANFLQ-GTIPSSLGNLTLLTYLSFGANNLQGNIPFSLGNCKN 465 (1009)
Q Consensus 387 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 465 (1009)
......+|+.|+||.|+++ .+|.+++++++|+.|++.+|+++ .-+|+.++.|..|+.+..++|.+. .+|++++.|..
T Consensus 263 ~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~k 340 (1255)
T KOG0444|consen 263 TEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVK 340 (1255)
T ss_pred cHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHH
Confidence 2233344555555555555 55555555555555555555554 234555555555555555555555 45555555555
Q ss_pred ccccccCCCCcc
Q 047768 466 LMFFFAPRNKLT 477 (1009)
Q Consensus 466 L~~l~l~~N~l~ 477 (1009)
|+.|.++.|++.
T Consensus 341 L~kL~L~~NrLi 352 (1255)
T KOG0444|consen 341 LQKLKLDHNRLI 352 (1255)
T ss_pred HHHhccccccee
Confidence 554444444443
No 77
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-38 Score=310.01 Aligned_cols=250 Identities=23% Similarity=0.316 Sum_probs=208.8
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALV 781 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 781 (1009)
-|.++.+||+|+||.||+|.++++|+.||||.+..+ .+-.++.+|+.+|++++.|+||+++|.+.. ....++|
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK-----~sDLWIV 106 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFK-----HSDLWIV 106 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhcc-----CCceEee
Confidence 467788999999999999999999999999988543 346788999999999999999999997543 3678999
Q ss_pred EeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccc
Q 047768 782 YEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 861 (1009)
Q Consensus 782 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~ 861 (1009)
||||..|+..+.++.+.. ++++.++..++++.++||+|||.. .-||||||+.|||++.+|.+|++|||.|..
T Consensus 107 MEYCGAGSiSDI~R~R~K-----~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQ 178 (502)
T KOG0574|consen 107 MEYCGAGSISDIMRARRK-----PLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQ 178 (502)
T ss_pred hhhcCCCcHHHHHHHhcC-----CccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccch
Confidence 999999999999987765 499999999999999999999998 889999999999999999999999999987
Q ss_pred cCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccch
Q 047768 862 LSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEK 941 (1009)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 941 (1009)
+.+ +......+.||+.|||||+++.-.|..++||||+|+...||..|++||.....
T Consensus 179 LTD--------TMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHP---------------- 234 (502)
T KOG0574|consen 179 LTD--------TMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHP---------------- 234 (502)
T ss_pred hhh--------hHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccc----------------
Confidence 653 33556678999999999999999999999999999999999999999974321
Q ss_pred hhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 942 VMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 942 ~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
++.++---.. +...--.+++|..++-++++.|+-..|++|-|+-++++.
T Consensus 235 MRAIFMIPT~------PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 235 MRAIFMIPTK------PPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred cceeEeccCC------CCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 1111100000 011112334677889999999999999999999988764
No 78
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=7.2e-36 Score=327.00 Aligned_cols=261 Identities=27% Similarity=0.463 Sum_probs=204.7
Q ss_pred ccCccCCcccccCCceEEEEEEecCC-----eEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCC
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENG-----MLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKG 774 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 774 (1009)
++|++.+.||+|+||.||+|.....+ ..||+|.++.... .....+.+|++++++++||||+++++++...
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~---- 80 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE---- 80 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC----
Confidence 46888999999999999999986544 6899999864432 2235688999999999999999999987543
Q ss_pred CceEEEEEeccCCCCHHHHHhccCCCC----------CccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCcee
Q 047768 775 VDFKALVYEYMQNGSLEEWLHQRDDQL----------GICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVL 844 (1009)
Q Consensus 775 ~~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nil 844 (1009)
...+++|||+++|+|.+++....... ....+++.++..++.|++.|++|||+. +++||||||+||+
T Consensus 81 -~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil 156 (283)
T cd05048 81 -QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCL 156 (283)
T ss_pred -CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEE
Confidence 56899999999999999997653211 013488899999999999999999999 9999999999999
Q ss_pred eCCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCccc
Q 047768 845 LDHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESM 923 (1009)
Q Consensus 845 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~ 923 (1009)
+++++.+||+|||+++........ .......+++.|+|||++.+..++.++|||||||++|||++ |..||...
T Consensus 157 ~~~~~~~~L~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~ 230 (283)
T cd05048 157 VGEGLTVKISDFGLSRDIYSADYY------RVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGF 230 (283)
T ss_pred EcCCCcEEECCCcceeeccccccc------cccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 999999999999999865432211 11123456789999999999999999999999999999998 99998743
Q ss_pred ccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 047768 924 FNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCH 999 (1009)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~ 999 (1009)
... +.... +....... .+..++.++.+++.+||+.||++||+++||++.|++
T Consensus 231 ~~~-----~~~~~--------i~~~~~~~-----------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 231 SNQ-----EVIEM--------IRSRQLLP-----------CPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred CHH-----HHHHH--------HHcCCcCC-----------CcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 221 11110 00000000 112445678999999999999999999999999875
No 79
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=3.5e-36 Score=333.66 Aligned_cols=238 Identities=24% Similarity=0.307 Sum_probs=190.0
Q ss_pred ccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEecc
Q 047768 709 IGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYEYM 785 (1009)
Q Consensus 709 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 785 (1009)
||+|+||.||+|.+..+++.||+|+++... ......+.+|++++++++||||+++++++.. ....++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQS-----PEKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEec-----CCeEEEEEcCC
Confidence 699999999999999899999999986432 2234567889999999999999999988654 36789999999
Q ss_pred CCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccCCC
Q 047768 786 QNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSAS 865 (1009)
Q Consensus 786 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 865 (1009)
++|+|.+++.... .+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 76 ~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 146 (312)
T cd05585 76 NGGELFHHLQREG------RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD 146 (312)
T ss_pred CCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccC
Confidence 9999999997654 288999999999999999999999 9999999999999999999999999999754321
Q ss_pred CCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchhhhc
Q 047768 866 PLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKVMEI 945 (1009)
Q Consensus 866 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 945 (1009)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+.........
T Consensus 147 ~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~-----~~~~~~~~~~~~---- 209 (312)
T cd05585 147 D--------DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN-----VNEMYRKILQEP---- 209 (312)
T ss_pred C--------CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC-----HHHHHHHHHcCC----
Confidence 1 12234568999999999999999999999999999999999999996421 222222111110
Q ss_pred cCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 047768 946 VDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDV 993 (1009)
Q Consensus 946 ~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~ev 993 (1009)
.. . +.....++.+++.+|++.||++||++.++
T Consensus 210 ----~~-~-----------~~~~~~~~~~li~~~L~~dp~~R~~~~~~ 241 (312)
T cd05585 210 ----LR-F-----------PDGFDRDAKDLLIGLLSRDPTRRLGYNGA 241 (312)
T ss_pred ----CC-C-----------CCcCCHHHHHHHHHHcCCCHHHcCCCCCH
Confidence 00 0 01123457799999999999999864333
No 80
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=9.1e-36 Score=326.09 Aligned_cols=271 Identities=24% Similarity=0.316 Sum_probs=204.0
Q ss_pred CccCCcccccCCceEEEEEE----ecCCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 703 FSSSNTIGRGSFGFVYKGVL----HENGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
|.+.+.||+|+||+||.+.. ..++..||+|+++.... ...+.+.+|++++++++||||+++++++... ....
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~ 82 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQ---GGKG 82 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CCce
Confidence 37889999999999988764 34678999999865432 2346788999999999999999999987542 3356
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++||||+++++|.+++.... +++.++..++.|++.|+.|||++ +|+||||||+||++++++.+|++|||
T Consensus 83 ~~lv~e~~~~~~l~~~~~~~~-------l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg 152 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLPKHK-------LNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFG 152 (283)
T ss_pred EEEEecCCCCCCHHHHHHHcC-------CCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecc
Confidence 789999999999999997643 89999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH-H
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK-R 936 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~-~ 936 (1009)
+++......... .......++..|+|||.+.+..++.++||||||+++|||+||+.||............... .
T Consensus 153 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 227 (283)
T cd05080 153 LAKAVPEGHEYY-----RVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQ 227 (283)
T ss_pred cccccCCcchhh-----ccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccc
Confidence 998665322100 0111233567799999999889999999999999999999999998643221100000000 0
Q ss_pred hccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 047768 937 ALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHAR 1001 (1009)
Q Consensus 937 ~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~ 1001 (1009)
.....+.+.++.... ...+..++.++.+++.+||+.+|++|||++++++.|+++.
T Consensus 228 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 228 MTVVRLIELLERGMR----------LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred cchhhhhhhhhcCCC----------CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 000011111111110 0111234567899999999999999999999999999875
No 81
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.8e-35 Score=318.61 Aligned_cols=251 Identities=27% Similarity=0.422 Sum_probs=198.8
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
++|++.+.||+|+||.||+|.++ ++..+|+|.++... ...+.+.+|++++++++||||+++++++... ...++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~i 76 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQ-----KPLYI 76 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccC-----CCEEE
Confidence 56888899999999999999886 56689999876332 2356788999999999999999999987543 56899
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
||||+++|+|.++++.... .+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+|++|||.++
T Consensus 77 v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~ 148 (256)
T cd05114 77 VTEFMENGCLLNYLRQRQG-----KLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTR 148 (256)
T ss_pred EEEcCCCCcHHHHHHhCcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCcc
Confidence 9999999999999976543 388999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhcc
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
....... .......++..|+|||++.+..++.++||||||+++|||++ |+.||..... .+.......
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~-----~~~~~~i~~ 216 (256)
T cd05114 149 YVLDDEY-------TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN-----YEVVEMISR 216 (256)
T ss_pred ccCCCce-------eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHHC
Confidence 6543211 11122345678999999998899999999999999999999 8999864321 111111100
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKL 997 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L 997 (1009)
. .....+ .....++.+++.+||+.+|++||+++|+++.|
T Consensus 217 ~--------~~~~~~-----------~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 217 G--------FRLYRP-----------KLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred C--------CCCCCC-----------CCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 0 000000 01224678999999999999999999999886
No 82
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=5.6e-36 Score=333.42 Aligned_cols=242 Identities=22% Similarity=0.270 Sum_probs=193.1
Q ss_pred CcccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEe
Q 047768 707 NTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYE 783 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 783 (1009)
+.||+|+||.||+|+.+.+|+.||+|+++.... .....+.+|++++++++||||+++++++.. ....++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~-----~~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-----HDRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEec-----CCEEEEEEe
Confidence 469999999999999998999999999975422 223567789999999999999999988654 367899999
Q ss_pred ccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccC
Q 047768 784 YMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLS 863 (1009)
Q Consensus 784 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~ 863 (1009)
|+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 ~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~ 146 (323)
T cd05595 76 YANGGELFFHLSRER------VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred CCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhcccc
Confidence 999999999887654 388999999999999999999999 99999999999999999999999999987532
Q ss_pred CCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchhh
Q 047768 864 ASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKVM 943 (1009)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1009)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...........
T Consensus 147 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~-----~~~~~~~~~~~-- 211 (323)
T cd05595 147 SDG--------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----ERLFELILMEE-- 211 (323)
T ss_pred CCC--------CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH-----HHHHHHHhcCC--
Confidence 211 112235689999999999999999999999999999999999999964321 11111111110
Q ss_pred hccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 047768 944 EIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRM-----EMTDVVV 995 (1009)
Q Consensus 944 ~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rp-----t~~evl~ 995 (1009)
. ..+ .....++.+++.+|++.||++|| ++.++++
T Consensus 212 ------~-~~p-----------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 212 ------I-RFP-----------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred ------C-CCC-----------CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 0 000 01234567999999999999998 7888765
No 83
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-39 Score=361.15 Aligned_cols=485 Identities=26% Similarity=0.348 Sum_probs=367.3
Q ss_pred eeeecCCcCCccCCccccCccccccccccccccCCCCCCCCcCCCcCcEEecccccccCCCchHHhhhccCCcCeEeecC
Q 047768 98 YINIADNDFHGEIPDRIGNLFRLETLVLANNSFSGRIPTNLSHCSKLITFSAHRNNLVGEIPEELISRRLFNLQGLSVGD 177 (1009)
Q Consensus 98 ~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~ 177 (1009)
.+|++..++. .||..+..-..|+.|++++|.+-...-+...+.-+|+.||+++|.++ ..|..+ ..+..|+.|.++.
T Consensus 2 ~vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~i--t~l~~L~~ln~s~ 77 (1081)
T KOG0618|consen 2 HVDASDEQLE-LIPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQI--TLLSHLRQLNLSR 77 (1081)
T ss_pred CcccccccCc-ccchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchh--hhHHHHhhcccch
Confidence 3567777777 78887776666888888888776333334455666888899888875 777776 4577888889998
Q ss_pred ccCCCCCCcccCCccccceeecccCcccCCCCcccccccccccccccCccCCCCCCCcccCCChHHHHHhhCCccCCCCC
Q 047768 178 NQLTGQLPASIGNLSALRVIDIRTNRLWGKIPITLSQLTSLAYLHVGDNHFSGTIPPSVYNISSLVEIYLYGNRFTGSLP 257 (1009)
Q Consensus 178 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip 257 (1009)
|.|. ..|.+.+++.+|++|.|.+|++ ...|..+..+.+|++|+++.|++. .+|..+..++.++.+..++|.....++
T Consensus 78 n~i~-~vp~s~~~~~~l~~lnL~~n~l-~~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg 154 (1081)
T KOG0618|consen 78 NYIR-SVPSSCSNMRNLQYLNLKNNRL-QSLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLG 154 (1081)
T ss_pred hhHh-hCchhhhhhhcchhheeccchh-hcCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhc
Confidence 8888 6778888888899999988888 478888888889999999998887 888888888888888888883221232
Q ss_pred hhhccCCCcccceeccccccCCCCCCCcCcccccccccccccccccccccccccccccccccccccccCCCCCCCcchhh
Q 047768 258 IEIGKNLPNLRNFVIYTNNFTGSLPDSFSNASNLEVLHLAENQFRGQVSINFNGLKDLSMLGLATNFLGNGAANDLDFVD 337 (1009)
Q Consensus 258 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 337 (1009)
. ..++.++|..|.+.+.++..+..++. .|||.+|.+. ......+.+|+.|....|.+..+..
T Consensus 155 ~------~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls~l~~------- 216 (1081)
T KOG0618|consen 155 Q------TSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLSELEI------- 216 (1081)
T ss_pred c------ccchhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhhhccchhhhhhhhcccceEEe-------
Confidence 2 22778888888888888888877776 7888888887 2345567778888888888876443
Q ss_pred hcccccccceEEccCCCCCCcCchhhhhhcccceEEEcCCCccccCCCccccCcCccCEEEccCCCCCCCCCCCcCCccc
Q 047768 338 LLTNCTKLQYLYLADNGFGGVLPHSIANLSTALIDFNLGKNQIYGTIPPGIANLVNLNSLRMEANRLTGTIPHVIGELKN 417 (1009)
Q Consensus 338 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 417 (1009)
..++|+.|+.++|.++...+... +.+|+++++++|+++ .+|+++..+.+|+.|+..+|+|+ .+|..+....+
T Consensus 217 ---~g~~l~~L~a~~n~l~~~~~~p~---p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~ 288 (1081)
T KOG0618|consen 217 ---SGPSLTALYADHNPLTTLDVHPV---PLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITS 288 (1081)
T ss_pred ---cCcchheeeeccCcceeeccccc---cccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhh
Confidence 23688888888888884333322 346888889999888 55688888889999999999886 78888888888
Q ss_pred ccceecccccccCCCCcccccccccccccccCcccccccCCC-CCCCCC-ccccccCCCCccCCCchhhhhhccceeeEe
Q 047768 418 LQLLHLHANFLQGTIPSSLGNLTLLTYLSFGANNLQGNIPFS-LGNCKN-LMFFFAPRNKLTGALPQQILEITTLSLSLD 495 (1009)
Q Consensus 418 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~-L~~l~l~~N~l~~~~p~~~~~~~~~~~~L~ 495 (1009)
|+.|+..+|.+. .+|.....++.|++|+|..|+|. ..|.. +.-... |..+..+.|++. ..|..-......+..|.
T Consensus 289 L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~-~lp~~~e~~~~~Lq~Ly 365 (1081)
T KOG0618|consen 289 LVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLS-TLPSYEENNHAALQELY 365 (1081)
T ss_pred HHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhcccc-ccccccchhhHHHHHHH
Confidence 888999899888 67777778888889999999888 45543 333333 677778888877 34422222222333588
Q ss_pred cCCCccCCCCCCCccCCCCCCeeeccccccCCCccccccCCCCccEEEecCcccccccccccccccccceEcCCCccccc
Q 047768 496 LSDNLLNGSLPLGVGNLKSLVRLGIARNQFSGQIPVTLGACTSLEYVELQGNSFSGTIPQSLSSLTSIKELDLSQNNFSG 575 (1009)
Q Consensus 496 Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 575 (1009)
+.+|.|+...-..+.+.+.|+.|+|++|+|.......+.++..|+.|+||+|+|+ .+|..+.++..|++|...+|+|.
T Consensus 366 lanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~- 443 (1081)
T KOG0618|consen 366 LANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL- 443 (1081)
T ss_pred HhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-
Confidence 8888888777667888888899999999887544556788888889999999988 78888888888999998888887
Q ss_pred ccccccccccccCceecccccCcc-cCCCCCcccCccccccccCCCc
Q 047768 576 QIPKYLENLSFLQYLNLSYNHFEG-EVPTKGIFKNKTGFSIVGNGKL 621 (1009)
Q Consensus 576 ~~p~~~~~l~~L~~L~ls~N~l~g-~~p~~~~~~~~~~~~~~~n~~l 621 (1009)
..| ++..+++|+.+|||.|+|+- .+|......++.-+.+.||.++
T Consensus 444 ~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 444 SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRL 489 (1081)
T ss_pred ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCccc
Confidence 677 78888889999999888863 3444333345566677788763
No 84
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4.2e-36 Score=335.80 Aligned_cols=247 Identities=21% Similarity=0.250 Sum_probs=197.7
Q ss_pred hccCccCCcccccCCceEEEEEEecCC-eEEEEEEeeccc---ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCC
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENG-MLVAVKVINLEQ---KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~-~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 775 (1009)
.++|.+.+.||+|+||.||+|+++.++ ..||+|++.... ....+.+.+|+++++.++||||+++++++...
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~----- 103 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDE----- 103 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeC-----
Confidence 457899999999999999999977554 689999986432 22345688899999999999999999987543
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
...++||||+++|+|.+++..... +++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|
T Consensus 104 ~~~~lv~Ey~~~g~L~~~i~~~~~------~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~D 174 (340)
T PTZ00426 104 SYLYLVLEFVIGGEFFTFLRRNKR------FPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTD 174 (340)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEec
Confidence 678999999999999999987543 88999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 935 (1009)
||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .....
T Consensus 175 FG~a~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-----~~~~~ 238 (340)
T PTZ00426 175 FGFAKVVDTR-----------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP-----LLIYQ 238 (340)
T ss_pred CCCCeecCCC-----------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH-----HHHHH
Confidence 9999865321 1235689999999999998999999999999999999999999974321 11111
Q ss_pred HhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 047768 936 RALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRM-----EMTDVVVK 996 (1009)
Q Consensus 936 ~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rp-----t~~evl~~ 996 (1009)
.. ..... ..+ ......+.+++.+|++.||++|+ +++|+++.
T Consensus 239 ~i--------~~~~~-~~p-----------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 239 KI--------LEGII-YFP-----------KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred HH--------hcCCC-CCC-----------CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 11 11000 000 01123467899999999999995 78887653
No 85
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-36 Score=296.74 Aligned_cols=253 Identities=25% Similarity=0.360 Sum_probs=202.2
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccc--------hHHHHHHHHHHHhc-CCCCcceEEeeeecc
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGG--------SKSFAAECEALRSI-RHRNLIKIVTICSSI 770 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 770 (1009)
...|...+.+|+|..++|.++.++.+|+.+|+|++....... .+.-.+|+.+++++ .||+|+.+.+++.
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye-- 93 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE-- 93 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc--
Confidence 345666788999999999999999999999999996443211 13456799999998 7999999999854
Q ss_pred ccCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCc
Q 047768 771 DFKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMV 850 (1009)
Q Consensus 771 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~ 850 (1009)
...+.++|+|.|+.|.|.||+.+.- .+++++..+|++|+..|++|||.+ .||||||||+|||++++.+
T Consensus 94 ---s~sF~FlVFdl~prGELFDyLts~V------tlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~ 161 (411)
T KOG0599|consen 94 ---SDAFVFLVFDLMPRGELFDYLTSKV------TLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMN 161 (411)
T ss_pred ---CcchhhhhhhhcccchHHHHhhhhe------eecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccc
Confidence 4478899999999999999998754 499999999999999999999999 9999999999999999999
Q ss_pred eEEeccccccccCCCCCCCccccCCccccccccccccCccccCC------CCCCCcccchHHHHHHHHHHhCCCCCcccc
Q 047768 851 AHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG------GEASMRGGVYSYGILLLEIFTRRRPTESMF 924 (1009)
Q Consensus 851 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwS~Gvvl~elltg~~p~~~~~ 924 (1009)
+||+|||+|+.+.++ ......+||++|.|||.+.- ..|+...|+||+||++|-++.|++||+.-.
T Consensus 162 i~isDFGFa~~l~~G---------ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk 232 (411)
T KOG0599|consen 162 IKISDFGFACQLEPG---------EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK 232 (411)
T ss_pred eEEeccceeeccCCc---------hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH
Confidence 999999999988764 34456899999999997643 357889999999999999999999997421
Q ss_pred cCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 925 NEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
+ -.....+-+.-.++-++.+. +......+++.+|++.||..|.|++|+++.
T Consensus 233 Q------mlMLR~ImeGkyqF~speWa---------------dis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 233 Q------MLMLRMIMEGKYQFRSPEWA---------------DISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred H------HHHHHHHHhcccccCCcchh---------------hccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 0 00111111222222222221 222356789999999999999999999863
No 86
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3e-36 Score=326.20 Aligned_cols=254 Identities=23% Similarity=0.320 Sum_probs=211.8
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccc--hHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGG--SKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
.++|...+.+|+|+||.++.++++.+++.||+|.+....... .+....|+.++++++|||||.+.+.+.. ++..
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~----~~~~ 78 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEE----DGQL 78 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhc----CCce
Confidence 357888999999999999999999999999999997664332 3467889999999999999999987533 3445
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++||+|++||++.+.+.+.+. ..++++++..|+.|++.|+.|||++ .|+|||||+.||+++.++.||++|||
T Consensus 79 l~Ivm~Y~eGg~l~~~i~~~k~----~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfG 151 (426)
T KOG0589|consen 79 LCIVMEYCEGGDLAQLIKEQKG----VLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFG 151 (426)
T ss_pred EEEEEeecCCCCHHHHHHHHhh----ccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchh
Confidence 8999999999999999988763 3599999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
+|+.+.... .......||+.||.||.+.+.+|..|+||||+||++|||++-+++|.... +...+.+.
T Consensus 152 laK~l~~~~--------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~-----m~~Li~ki 218 (426)
T KOG0589|consen 152 LAKILNPED--------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASN-----MSELILKI 218 (426)
T ss_pred hhhhcCCch--------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccc-----hHHHHHHH
Confidence 999887542 23345789999999999999999999999999999999999999997432 22222222
Q ss_pred ccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 938 LPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 938 ~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
......+. +..+..++..++..|++.+|..||++.+++.+
T Consensus 219 --------~~~~~~Pl-----------p~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 219 --------NRGLYSPL-----------PSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred --------hhccCCCC-----------CccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 11112221 22344568899999999999999999999987
No 87
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=9.2e-36 Score=332.24 Aligned_cols=243 Identities=23% Similarity=0.287 Sum_probs=194.0
Q ss_pred CcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEe
Q 047768 707 NTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYE 783 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 783 (1009)
+.||+|+||.||+|+.+.+++.||||+++... ......+.+|+++++.++||||+++.+++.. .+..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQT-----KDRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc-----CCEEEEEEe
Confidence 46999999999999999899999999997442 2234567889999999999999999988654 367899999
Q ss_pred ccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccC
Q 047768 784 YMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLS 863 (1009)
Q Consensus 784 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~ 863 (1009)
|+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 y~~~g~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~ 146 (328)
T cd05593 76 YVNGGELFFHLSRER------VFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (328)
T ss_pred CCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCC
Confidence 999999999987654 389999999999999999999999 99999999999999999999999999987532
Q ss_pred CCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchhh
Q 047768 864 ASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKVM 943 (1009)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1009)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+..........
T Consensus 147 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~-----~~~~~~~~~~~~~- 212 (328)
T cd05593 147 TDA--------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HEKLFELILMEDI- 212 (328)
T ss_pred Ccc--------cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCC-----HHHHHHHhccCCc-
Confidence 211 11223568999999999999999999999999999999999999996422 1111111111000
Q ss_pred hccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 047768 944 EIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRM-----EMTDVVVK 996 (1009)
Q Consensus 944 ~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rp-----t~~evl~~ 996 (1009)
..+ .....++.+++.+|++.||++|| ++.|+++.
T Consensus 213 --------~~p-----------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 213 --------KFP-----------RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred --------cCC-----------CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 000 01223567899999999999997 88888753
No 88
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=8.7e-36 Score=333.31 Aligned_cols=267 Identities=23% Similarity=0.339 Sum_probs=204.3
Q ss_pred hccCccCCcccccCCceEEEEEEec-----CCeEEEEEEeecccc-cchHHHHHHHHHHHhc-CCCCcceEEeeeecccc
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHE-----NGMLVAVKVINLEQK-GGSKSFAAECEALRSI-RHRNLIKIVTICSSIDF 772 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 772 (1009)
.++|.+.+.||+|+||.||+|.+.. +++.||+|+++.... ...+.+.+|+++++++ +|+||++++++|...
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~-- 83 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKP-- 83 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecC--
Confidence 4579999999999999999997543 357899999864322 2235677899999999 899999999987542
Q ss_pred CCCceEEEEEeccCCCCHHHHHhccCCCC---------------------------------------------------
Q 047768 773 KGVDFKALVYEYMQNGSLEEWLHQRDDQL--------------------------------------------------- 801 (1009)
Q Consensus 773 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------------------------------------------------- 801 (1009)
....++++||+++++|.+++.......
T Consensus 84 --~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (337)
T cd05054 84 --GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE 161 (337)
T ss_pred --CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence 356789999999999999986532110
Q ss_pred ----CccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccCCCCCCCccccCCcc
Q 047768 802 ----GICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSASPLGNVVETPSSS 877 (1009)
Q Consensus 802 ----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~ 877 (1009)
....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.+...... ...
T Consensus 162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~------~~~ 232 (337)
T cd05054 162 GDELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY------VRK 232 (337)
T ss_pred hhHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcch------hhc
Confidence 012589999999999999999999999 9999999999999999999999999999876432110 111
Q ss_pred ccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhccchhhhccCCCCCChhhh
Q 047768 878 IGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEE 956 (1009)
Q Consensus 878 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 956 (1009)
....++..|+|||++.+..++.++|||||||++|||++ |+.||....... ...... ...... ..
T Consensus 233 ~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~~----~~~~~~-------~~--- 297 (337)
T cd05054 233 GDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRRL----KEGTRM-------RA--- 297 (337)
T ss_pred cCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHHH----hccCCC-------CC---
Confidence 12346778999999999999999999999999999998 999986422111 111110 000000 00
Q ss_pred hhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 047768 957 RTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQ 1002 (1009)
Q Consensus 957 r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~ 1002 (1009)
...+..++.+++.+||+.+|++||++.|+++.|+.+.+
T Consensus 298 --------~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 298 --------PEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred --------CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 01223467899999999999999999999999998765
No 89
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-35 Score=337.58 Aligned_cols=266 Identities=22% Similarity=0.241 Sum_probs=198.5
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
..+|.+.+.||+|+||.||+|.+..+++.||+|+.. ...+.+|++++++++||||+++++++.. ....+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~-----~~~~~ 159 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTY-----NKFTC 159 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEE-----CCeeE
Confidence 357999999999999999999999999999999753 2456889999999999999999998654 36789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+|+|++. ++|.+++.... .+++.+++.++.|++.||+|||++ +||||||||+||+++.++.+||+|||+|
T Consensus 160 lv~e~~~-~~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a 229 (391)
T PHA03212 160 LILPRYK-TDLYCYLAAKR------NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAA 229 (391)
T ss_pred EEEecCC-CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcc
Confidence 9999994 79999887654 288999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCC------ccHHHH
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEG------LTLHEF 933 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~------~~~~~~ 933 (1009)
+...... ........||+.|+|||++.+..++.++||||+||++|||++|+.||......+ ..+...
T Consensus 230 ~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i 302 (391)
T PHA03212 230 CFPVDIN-------ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLI 302 (391)
T ss_pred ccccccc-------ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHH
Confidence 7543211 112234679999999999999999999999999999999999998875322110 111111
Q ss_pred HHHhc--cch--------hhhcc---CCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 934 AKRAL--PEK--------VMEIV---DPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 934 ~~~~~--~~~--------~~~~~---d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
..... +.+ +.... .......+..++.. ....+.+.++.+++.+|++.||++|||+.|+++
T Consensus 303 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 303 IRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLW--TNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCH--HHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 11110 000 00000 00000001111100 001123457889999999999999999999985
No 90
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=8.8e-36 Score=326.42 Aligned_cols=272 Identities=24% Similarity=0.361 Sum_probs=204.2
Q ss_pred ccCccCCcccccCCceEEEEEEe----cCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCc
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLH----ENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVD 776 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 776 (1009)
.+|.+.+.||+|+||.||+|..+ .++..||+|+++.......+.+.+|++++++++||||+++++++... +..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---GRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccC---CCC
Confidence 47888899999999999999853 46789999998755444456789999999999999999999987532 335
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
..++|+||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~-----~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~df 152 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHRE-----RLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDF 152 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcCc-----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCC
Confidence 67999999999999999976543 389999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHH
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKR 936 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 936 (1009)
|+++......... .......++..|+|||+..+..++.++|||||||++|||++|..|+...... ..+....
T Consensus 153 g~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~~~~ 224 (284)
T cd05081 153 GLTKVLPQDKEYY-----KVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE---FMRMMGN 224 (284)
T ss_pred cccccccCCCcce-----eecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh---hhhhccc
Confidence 9998765422100 0011122445699999999889999999999999999999988775432111 0000000
Q ss_pred hcc-----chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 047768 937 ALP-----EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHAR 1001 (1009)
Q Consensus 937 ~~~-----~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~ 1001 (1009)
... ..+.+.+..... ......++.++.+++.+||+.+|++||||.||++.|+.++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 225 DKQGQMIVYHLIELLKNNGR----------LPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred ccccccchHHHHHHHhcCCc----------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 000 001111111000 0111234456889999999999999999999999998763
No 91
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=5e-35 Score=318.51 Aligned_cols=265 Identities=25% Similarity=0.378 Sum_probs=203.8
Q ss_pred CccCCcccccCCceEEEEEEecC---CeEEEEEEeeccccc--chHHHHHHHHHHHhcCCCCcceEEeeeecccc-CCCc
Q 047768 703 FSSSNTIGRGSFGFVYKGVLHEN---GMLVAVKVINLEQKG--GSKSFAAECEALRSIRHRNLIKIVTICSSIDF-KGVD 776 (1009)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~~ 776 (1009)
|.+.+.||+|+||.||+|....+ +..||||+++..... ....+.+|++.++.++||||+++++++..... ....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 56788999999999999998643 378999998754322 23578899999999999999999998765432 2334
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
..++|+||+++|+|.+++...........+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 5799999999999999986543222233589999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHH
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 935 (1009)
|+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||..... .+...
T Consensus 158 g~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~-----~~~~~ 226 (273)
T cd05035 158 GLSKKIYSGDYY------RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN-----HEIYD 226 (273)
T ss_pred cceeeccccccc------cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH-----HHHHH
Confidence 999876543211 11112335678999999998999999999999999999999 8888864321 11111
Q ss_pred HhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 047768 936 RALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHA 1000 (1009)
Q Consensus 936 ~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i 1000 (1009)
.. .+...... +..+..++.+++.+|++.||++||++.|+++.|+.+
T Consensus 227 ~~--------~~~~~~~~-----------~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 227 YL--------RHGNRLKQ-----------PEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred HH--------HcCCCCCC-----------CcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11 01000000 112345688999999999999999999999999865
No 92
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.2e-35 Score=335.34 Aligned_cols=249 Identities=24% Similarity=0.343 Sum_probs=191.2
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
++|+..+.||+|+||.||+|++..+++.||||++..... ...+.+.+|++++++++|+||+++++++.. ....+
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 148 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDH-----NGEIQ 148 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEecc-----CCeEE
Confidence 456677899999999999999998999999999864332 224578899999999999999999998644 36789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+||||+++|+|.+.. ..++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 149 lv~e~~~~~~L~~~~----------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~ 215 (353)
T PLN00034 149 VLLEFMDGGSLEGTH----------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVS 215 (353)
T ss_pred EEEecCCCCcccccc----------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccc
Confidence 999999999986431 256777889999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCC-----CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHH
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-----GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFA 934 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 934 (1009)
+...... .......||..|+|||++.. ...+.++|||||||++|||++|+.||...... ......
T Consensus 216 ~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~--~~~~~~ 285 (353)
T PLN00034 216 RILAQTM--------DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG--DWASLM 285 (353)
T ss_pred eeccccc--------ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc--cHHHHH
Confidence 8664321 11223568999999998743 23456899999999999999999999732211 111111
Q ss_pred HHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 935 KRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 935 ~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
....... . ......+..++.+++.+||+.||++||++.|+++.
T Consensus 286 ~~~~~~~-----~--------------~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 286 CAICMSQ-----P--------------PEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred HHHhccC-----C--------------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1000000 0 00011233467899999999999999999999864
No 93
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=330.93 Aligned_cols=247 Identities=23% Similarity=0.322 Sum_probs=201.9
Q ss_pred cccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEeccCC
Q 047768 708 TIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYEYMQN 787 (1009)
Q Consensus 708 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~ 787 (1009)
+||+|.||+||.|++..+...+|||.+..........+..||..-++++|.|||+++|.|.. .++.-+.||.++|
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~se-----nGf~kIFMEqVPG 656 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSE-----NGFFKIFMEQVPG 656 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCC-----CCeEEEEeecCCC
Confidence 69999999999999999999999999976666667789999999999999999999999654 3678899999999
Q ss_pred CCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeC-CCCceEEeccccccccCCCC
Q 047768 788 GSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLD-HDMVAHVSDFGLAKFLSASP 866 (1009)
Q Consensus 788 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~-~~~~~kl~DfGla~~~~~~~ 866 (1009)
|||.+.++..... ..-.+.++-.+.+||++||.|||+. .|||||||-+||||+ -.|.+||+|||-++.+..-
T Consensus 657 GSLSsLLrskWGP---lKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi- 729 (1226)
T KOG4279|consen 657 GSLSSLLRSKWGP---LKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI- 729 (1226)
T ss_pred CcHHHHHHhccCC---CccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccC-
Confidence 9999999876542 2236778889999999999999999 999999999999995 5799999999999876532
Q ss_pred CCCccccCCccccccccccccCccccCCC--CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchhhh
Q 047768 867 LGNVVETPSSSIGVKGTIGYVAPEYGLGG--EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKVME 944 (1009)
Q Consensus 867 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 944 (1009)
......+.||..|||||++..+ .|+.++|||||||++.||.||++||..+......+-+.
T Consensus 730 -------nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkV----------- 791 (1226)
T KOG4279|consen 730 -------NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKV----------- 791 (1226)
T ss_pred -------CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhh-----------
Confidence 1334457899999999998876 57899999999999999999999997654332111111
Q ss_pred ccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 945 IVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 945 ~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.+.+..| ..+.+...+...++.+|..+||.+||+|.++++
T Consensus 792 ---GmyKvHP--------~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 792 ---GMYKVHP--------PIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred ---cceecCC--------CCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 1111111 223345556788999999999999999999874
No 94
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.6e-35 Score=323.39 Aligned_cols=261 Identities=23% Similarity=0.384 Sum_probs=205.1
Q ss_pred hccCccCCcccccCCceEEEEEEecCCe----EEEEEEeeccccc-chHHHHHHHHHHHhcCCCCcceEEeeeeccccCC
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGM----LVAVKVINLEQKG-GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKG 774 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 774 (1009)
.++|++.++||+|+||+||+|++..+++ .||+|+++..... ....+.+|+.+++.++||||+++++++..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~----- 80 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT----- 80 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-----
Confidence 4578889999999999999999876665 4899998644322 34578899999999999999999998753
Q ss_pred CceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEe
Q 047768 775 VDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 854 (1009)
Q Consensus 775 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~ 854 (1009)
...++++||+++|+|.++++.... .+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+
T Consensus 81 -~~~~l~~~~~~~g~l~~~l~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~ 151 (279)
T cd05109 81 -STVQLVTQLMPYGCLLDYVRENKD-----RIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKIT 151 (279)
T ss_pred -CCcEEEEEcCCCCCHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEEC
Confidence 346799999999999999987543 389999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHH
Q 047768 855 DFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEF 933 (1009)
Q Consensus 855 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~ 933 (1009)
|||+++........ .......++..|+|||...+..++.++|||||||++|||++ |..||...... ....+
T Consensus 152 dfG~~~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~ 223 (279)
T cd05109 152 DFGLARLLDIDETE------YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR--EIPDL 223 (279)
T ss_pred CCCceeecccccce------eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHH
Confidence 99999876532110 11112335678999999999999999999999999999998 88998643211 11111
Q ss_pred HHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 047768 934 AKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQNF 1004 (1009)
Q Consensus 934 ~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~~~ 1004 (1009)
. ....... ....+...+.+++.+||+.||+.||++.|+++.++.+.++.
T Consensus 224 ~------------~~~~~~~----------~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 224 L------------EKGERLP----------QPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred H------------HCCCcCC----------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 1 1100000 01123446789999999999999999999999999887665
No 95
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2.7e-35 Score=319.55 Aligned_cols=262 Identities=22% Similarity=0.317 Sum_probs=206.0
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
++|++.+.||+|+||.||+|+++.+++.||||.++.... .....+.+|++++++++|||++++++++... ..
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIED-----NE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEEC-----Ce
Confidence 578899999999999999999998999999998864322 2235688999999999999999999986543 67
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++|+||+++|+|.+++...... ...+++..+..++.|++.|++|||++ +++||||||+||+++.++.++++|||
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g 151 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFKKQ--KRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhhhc--cCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccc
Confidence 89999999999999988643221 12478899999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
++....... .......|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ....+....
T Consensus 152 ~~~~~~~~~--------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~---~~~~~~~~~ 220 (267)
T cd08228 152 LGRFFSSKT--------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLFSLCQKI 220 (267)
T ss_pred cceeccchh--------HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc---cHHHHHHHH
Confidence 998654321 111234578899999999988899999999999999999999999853221 111111110
Q ss_pred ccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 047768 938 LPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHAR 1001 (1009)
Q Consensus 938 ~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~ 1001 (1009)
... ...+. ........+.+++.+||+.+|++||++.||++.+++++
T Consensus 221 -----~~~---~~~~~----------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 221 -----EQC---DYPPL----------PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred -----hcC---CCCCC----------ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 000 00000 01123456889999999999999999999999998764
No 96
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.3e-35 Score=337.43 Aligned_cols=266 Identities=24% Similarity=0.346 Sum_probs=204.6
Q ss_pred HhccCccCCcccccCCceEEEEEEec-----CCeEEEEEEeeccccc-chHHHHHHHHHHHhcC-CCCcceEEeeeeccc
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLHE-----NGMLVAVKVINLEQKG-GSKSFAAECEALRSIR-HRNLIKIVTICSSID 771 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 771 (1009)
..++|.+.+.||+|+||.||+|++.. .+..||||+++..... ..+.+.+|+++++++. ||||++++++|...
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~- 113 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS- 113 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC-
Confidence 35688899999999999999998742 2357999999644322 2457889999999996 99999999997543
Q ss_pred cCCCceEEEEEeccCCCCHHHHHhccCCCC--------------------------------------------------
Q 047768 772 FKGVDFKALVYEYMQNGSLEEWLHQRDDQL-------------------------------------------------- 801 (1009)
Q Consensus 772 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-------------------------------------------------- 801 (1009)
...++||||+++|+|.+++.......
T Consensus 114 ----~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (400)
T cd05105 114 ----GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYV 189 (400)
T ss_pred ----CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccc
Confidence 67899999999999999987542100
Q ss_pred ----------------------------------------CccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCC
Q 047768 802 ----------------------------------------GICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPS 841 (1009)
Q Consensus 802 ----------------------------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~ 841 (1009)
....+++.++..++.|++.|++|||+. +|+||||||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~ 266 (400)
T cd05105 190 PMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAAR 266 (400)
T ss_pred hhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChH
Confidence 012478888999999999999999998 9999999999
Q ss_pred ceeeCCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCC
Q 047768 842 NVLLDHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPT 920 (1009)
Q Consensus 842 Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~ 920 (1009)
||+++.++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus 267 Nill~~~~~~kL~DfGla~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~ 340 (400)
T cd05105 267 NVLLAQGKIVKICDFGLARDIMHDSNY------VSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPY 340 (400)
T ss_pred hEEEeCCCEEEEEeCCcceeccccccc------cccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 999999999999999999865432110 11122346788999999999999999999999999999997 99998
Q ss_pred cccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 047768 921 ESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHA 1000 (1009)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i 1000 (1009)
.......... .. .... ... .....++.++.+++.+||+.||++||++.+|.+.|+++
T Consensus 341 ~~~~~~~~~~-~~----~~~~--------~~~----------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l 397 (400)
T cd05105 341 PGMIVDSTFY-NK----IKSG--------YRM----------AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESL 397 (400)
T ss_pred cccchhHHHH-HH----HhcC--------CCC----------CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence 7542211100 00 0000 000 00113445688999999999999999999999999876
Q ss_pred H
Q 047768 1001 R 1001 (1009)
Q Consensus 1001 ~ 1001 (1009)
.
T Consensus 398 ~ 398 (400)
T cd05105 398 L 398 (400)
T ss_pred c
Confidence 4
No 97
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=2.6e-35 Score=319.38 Aligned_cols=258 Identities=27% Similarity=0.427 Sum_probs=203.9
Q ss_pred hccCccCCcccccCCceEEEEEEecC---CeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCC
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHEN---GMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 775 (1009)
.++|++.+.||+|+||+||+|.++.. ...||||+++.... .....+.+|+.++++++||||+++++++.. .
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 77 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTK-----S 77 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEec-----C
Confidence 35788999999999999999998643 45899999864432 234578899999999999999999998654 3
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
...++||||+++++|.+++..... .+++.++..++.|++.|++|||+. +|+||||||+||++++++.+|++|
T Consensus 78 ~~~~iv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~d 149 (266)
T cd05033 78 RPVMIITEYMENGSLDKFLRENDG-----KFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSD 149 (266)
T ss_pred CceEEEEEcCCCCCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECc
Confidence 668999999999999999987543 389999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHH
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFA 934 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~ 934 (1009)
||+++....... ........++..|+|||.+.+..++.++||||||+++|||++ |..||...... +..
T Consensus 150 fg~~~~~~~~~~------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~-----~~~ 218 (266)
T cd05033 150 FGLSRRLEDSEA------TYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ-----DVI 218 (266)
T ss_pred cchhhccccccc------ceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH-----HHH
Confidence 999987752111 011112345678999999999999999999999999999998 99998643211 111
Q ss_pred HHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 047768 935 KRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHA 1000 (1009)
Q Consensus 935 ~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i 1000 (1009)
... .+....+. ...++..+.+++.+|++.+|++||++.|+++.|+++
T Consensus 219 ~~~--------~~~~~~~~-----------~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 219 KAV--------EDGYRLPP-----------PMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred HHH--------HcCCCCCC-----------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 110 00000000 112345688999999999999999999999999875
No 98
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-36 Score=330.54 Aligned_cols=253 Identities=25% Similarity=0.365 Sum_probs=204.3
Q ss_pred ccCCcccccCCceEEEEEEecC-C--eEEEEEEeeccccc-chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 704 SSSNTIGRGSFGFVYKGVLHEN-G--MLVAVKVINLEQKG-GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 704 ~~~~~lg~G~~g~V~~~~~~~~-~--~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
...+.||+|.||+|++|.|+.. | ..||||.++..... .-+.|.+|+.+|.+++|+|+++++|+... ....
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~------qp~m 186 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD------QPAM 186 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc------chhh
Confidence 3457899999999999999732 2 46999999765543 45789999999999999999999999654 4578
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+|+|.++.|||.+.|++... ..+-......++.|||.||.||.++ ++|||||.++|+++-....|||+|||+.
T Consensus 187 MV~ELaplGSLldrLrka~~----~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLm 259 (1039)
T KOG0199|consen 187 MVFELAPLGSLLDRLRKAKK----AILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLM 259 (1039)
T ss_pred HHhhhcccchHHHHHhhccc----cceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccce
Confidence 99999999999999998322 2488888999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
|-+........+.. ...-...|+|||.+....|+-++|||+|||++|||+| |+.||-... ...+
T Consensus 260 RaLg~ned~Yvm~p-----~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~-----g~qI----- 324 (1039)
T KOG0199|consen 260 RALGENEDMYVMAP-----QRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCR-----GIQI----- 324 (1039)
T ss_pred eccCCCCcceEecC-----CCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCC-----HHHH-----
Confidence 98876543222211 1334678999999999999999999999999999999 888986421 1121
Q ss_pred cchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 047768 939 PEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLC 998 (1009)
Q Consensus 939 ~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~ 998 (1009)
.+.+|.. ....++..|.+++++++++||...|++|||+..+.+.+-
T Consensus 325 ----L~~iD~~----------erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~ 370 (1039)
T KOG0199|consen 325 ----LKNIDAG----------ERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLV 370 (1039)
T ss_pred ----HHhcccc----------ccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHH
Confidence 1222200 112234478899999999999999999999999986543
No 99
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2e-35 Score=324.45 Aligned_cols=273 Identities=22% Similarity=0.306 Sum_probs=199.9
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhc---CCCCcceEEeeeeccccCCCc
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSI---RHRNLIKIVTICSSIDFKGVD 776 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~~~ 776 (1009)
+|++.+.||+|+||+||+|+++.+++.||+|.++.... .....+.+|+++++.+ +||||+++++++.........
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 47888999999999999999999999999999865432 2234566788877765 699999999987654444456
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
..++|+||+. ++|.+++..... ..+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+||
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~df 152 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPP----PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADF 152 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcc
Confidence 7899999997 589998876442 2389999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHH
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKR 936 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 936 (1009)
|+++..... .......||..|+|||++.+..++.++||||+||++|||++|+.||...... ....+....
T Consensus 153 g~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~ 222 (288)
T cd07863 153 GLARIYSCQ---------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDL 222 (288)
T ss_pred CccccccCc---------ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH-HHHHHHHHH
Confidence 999865432 1112346789999999999999999999999999999999999998643221 111111111
Q ss_pred hc-c--chhhhcc---CCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 937 AL-P--EKVMEIV---DPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 937 ~~-~--~~~~~~~---d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.. + ....... ........ .+. ......+...++.+++.+|++.||++|||+.|++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 223 IGLPPEDDWPRDVTLPRGAFSPRG-PRP--VQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred hCCCChhhCcccccccccccCCCC-CCc--hHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 10 0 0000000 00000000 000 00001123356789999999999999999999875
No 100
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=3.8e-35 Score=321.91 Aligned_cols=265 Identities=24% Similarity=0.407 Sum_probs=206.6
Q ss_pred ccCccCCcccccCCceEEEEEEe-----cCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCC
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLH-----ENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 775 (1009)
++|.+.+.||+|+||.||++... .++..||+|.++.......+.+.+|++++++++|||++++++++...
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 79 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEG----- 79 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC-----
Confidence 57888999999999999999853 34567999998654444456789999999999999999999997643
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCC-------CCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCC
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQ-------LGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHD 848 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~-------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~ 848 (1009)
...++|+||+++++|.+++...... .....+++.+++.++.|++.|++|||++ +++||||||+||+++++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~ 156 (288)
T cd05093 80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGEN 156 (288)
T ss_pred CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccC
Confidence 6789999999999999999754321 1122489999999999999999999998 99999999999999999
Q ss_pred CceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCC
Q 047768 849 MVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEG 927 (1009)
Q Consensus 849 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~ 927 (1009)
+.+||+|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 157 ~~~kl~dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~-- 228 (288)
T cd05093 157 LLVKIGDFGMSRDVYSTDY------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-- 228 (288)
T ss_pred CcEEeccCCccccccCCce------eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence 9999999999986543211 011112345788999999999999999999999999999999 8999864321
Q ss_pred ccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 047768 928 LTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQN 1003 (1009)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~~ 1003 (1009)
........... ....+ ..+..++.+++.+|++.+|.+|||+.|+.+.|+.+.+.
T Consensus 229 ---~~~~~~i~~~~--------~~~~~-----------~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 229 ---NEVIECITQGR--------VLQRP-----------RTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred ---HHHHHHHHcCC--------cCCCC-----------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 11111110100 00000 01234588999999999999999999999999998875
No 101
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.6e-35 Score=346.30 Aligned_cols=254 Identities=20% Similarity=0.225 Sum_probs=201.6
Q ss_pred cCccCCcccccCCceEEEEEEecC-CeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHEN-GMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
.|.+.+.||+|+||.||+|....+ +..||+|.+..........+.+|+++++.++||||+++++++... +..++
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~-----~~~~l 142 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSD-----DKLLL 142 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEEC-----CEEEE
Confidence 488899999999999999998766 788999987555444456788899999999999999999987643 68899
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
||||+++|+|.++++..... ..++++.++..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 143 v~E~~~gg~L~~~l~~~~~~--~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~ 217 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKE--HLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSK 217 (478)
T ss_pred EEECCCCCCHHHHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCce
Confidence 99999999999988653211 12488999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccc
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPE 940 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 940 (1009)
....... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+........
T Consensus 218 ~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~-----~~~~~~~~~~~ 286 (478)
T PTZ00267 218 QYSDSVS------LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPS-----QREIMQQVLYG 286 (478)
T ss_pred ecCCccc------cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhC
Confidence 7643211 112234569999999999999999999999999999999999999986421 11111111110
Q ss_pred hhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 941 KVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 941 ~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
...+.+ ..+..++.+++.+|++.||+.||++.+++.
T Consensus 287 --------~~~~~~-----------~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 287 --------KYDPFP-----------CPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred --------CCCCCC-----------ccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 000000 112345789999999999999999999875
No 102
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=4e-35 Score=319.07 Aligned_cols=265 Identities=23% Similarity=0.365 Sum_probs=201.1
Q ss_pred CccCCcccccCCceEEEEEEecCCe--EEEEEEeeccc--ccchHHHHHHHHHHHhcCCCCcceEEeeeecccc-CCCce
Q 047768 703 FSSSNTIGRGSFGFVYKGVLHENGM--LVAVKVINLEQ--KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDF-KGVDF 777 (1009)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~~~ 777 (1009)
|.+.+.||+|+||.||+|++..++. .||+|.++... ....+.+.+|++++++++|+||++++++|..... .....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3567899999999999999876654 69999886542 2234678899999999999999999998754311 22345
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++|+||+++|+|.+++...........+++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCC
Confidence 789999999999999885433222223489999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHH
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKR 936 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 936 (1009)
+++........ .......+++.|+|||+..+..++.++||||||+++|||++ |+.||..... .+....
T Consensus 158 ~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~~~~~~ 226 (272)
T cd05075 158 LSKKIYNGDYY------RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN-----SEIYDY 226 (272)
T ss_pred cccccCcccce------ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHH
Confidence 99876543210 01112345678999999999999999999999999999999 7888864221 111111
Q ss_pred hccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 047768 937 ALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHA 1000 (1009)
Q Consensus 937 ~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i 1000 (1009)
..... .... ...+...+.+++.+||+.+|++|||+.|+++.|+++
T Consensus 227 ~~~~~--------~~~~-----------~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 227 LRQGN--------RLKQ-----------PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred HHcCC--------CCCC-----------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 10000 0000 012334578999999999999999999999999874
No 103
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=9.2e-36 Score=322.00 Aligned_cols=256 Identities=29% Similarity=0.488 Sum_probs=206.5
Q ss_pred HhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
...+|++.+.||+|+||.||+|.++. +..||+|+++.........+.+|+++++.++|+||+++++++... ...
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~ 77 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVG-----EPV 77 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecC-----CCe
Confidence 34578899999999999999999985 889999999766554567889999999999999999999987543 678
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
++||||+++++|.++++.... ..+++.++..++.|++.|+.|||+. +|+||||+|+||++++++.+||+|||.
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~ 150 (261)
T cd05148 78 YIITELMEKGSLLAFLRSPEG----QVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGL 150 (261)
T ss_pred EEEEeecccCCHHHHHhcCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccc
Confidence 999999999999999986442 2488999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHh
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
+....... .......++..|+|||+..+..++.++||||||+++|+|++ |+.||..... .+.....
T Consensus 151 ~~~~~~~~--------~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~-----~~~~~~~ 217 (261)
T cd05148 151 ARLIKEDV--------YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN-----HEVYDQI 217 (261)
T ss_pred hhhcCCcc--------ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH-----HHHHHHH
Confidence 98664321 11113346778999999999999999999999999999998 8999864321 1111110
Q ss_pred ccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 047768 938 LPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCH 999 (1009)
Q Consensus 938 ~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~ 999 (1009)
....... .+..++..+.+++.+|++.||++|||++++++.|+.
T Consensus 218 --------~~~~~~~-----------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 218 --------TAGYRMP-----------CPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred --------HhCCcCC-----------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 0000000 011334567899999999999999999999999975
No 104
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=4.7e-35 Score=321.66 Aligned_cols=267 Identities=25% Similarity=0.408 Sum_probs=208.4
Q ss_pred ccCccCCcccccCCceEEEEEEe-----cCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCC
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLH-----ENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 775 (1009)
.+|.+.+.||+|+||.||+|++. .++..||+|.++.......+.+.+|++++++++|+||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 79 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDG----- 79 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccC-----
Confidence 46888899999999999999864 24567999998655444456799999999999999999999997543
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCC----------CCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceee
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQ----------LGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLL 845 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill 845 (1009)
...++||||+++++|.+++...... .....+++..++.++.|++.|++|||++ +|+||||||+||++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~ 156 (291)
T cd05094 80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLV 156 (291)
T ss_pred CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEE
Confidence 6789999999999999999764321 0112488999999999999999999999 99999999999999
Q ss_pred CCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccc
Q 047768 846 DHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMF 924 (1009)
Q Consensus 846 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~ 924 (1009)
+.++.+||+|||+++....... ........++..|+|||++.+..++.++|||||||++|||+| |+.||....
T Consensus 157 ~~~~~~~l~dfg~a~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 230 (291)
T cd05094 157 GANLLVKIGDFGMSRDVYSTDY------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS 230 (291)
T ss_pred ccCCcEEECCCCcccccCCCce------eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999976543211 011123456788999999999999999999999999999999 999986432
Q ss_pred cCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 047768 925 NEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQNF 1004 (1009)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~~~ 1004 (1009)
.. +..... ........ ...++..+.+++.+||+.+|++||++.+|++.|+++.+..
T Consensus 231 ~~-----~~~~~~--------~~~~~~~~-----------~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~ 286 (291)
T cd05094 231 NT-----EVIECI--------TQGRVLER-----------PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKAT 286 (291)
T ss_pred HH-----HHHHHH--------hCCCCCCC-----------CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhc
Confidence 11 111110 00000000 0123456889999999999999999999999999997654
Q ss_pred h
Q 047768 1005 L 1005 (1009)
Q Consensus 1005 ~ 1005 (1009)
+
T Consensus 287 ~ 287 (291)
T cd05094 287 P 287 (291)
T ss_pred C
Confidence 3
No 105
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=3e-35 Score=321.51 Aligned_cols=261 Identities=28% Similarity=0.458 Sum_probs=204.1
Q ss_pred hccCccCCcccccCCceEEEEEEec-----CCeEEEEEEeeccccc-chHHHHHHHHHHHhcCCCCcceEEeeeeccccC
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHE-----NGMLVAVKVINLEQKG-GSKSFAAECEALRSIRHRNLIKIVTICSSIDFK 773 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 773 (1009)
.++|.+.+.||+|+||.||+|.+.. +++.||||+++..... ..+.+.+|++++++++|+||+++++++...
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--- 80 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEG--- 80 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecC---
Confidence 3568888999999999999998753 3578999998654333 346899999999999999999999997643
Q ss_pred CCceEEEEEeccCCCCHHHHHhccCCC--------CCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceee
Q 047768 774 GVDFKALVYEYMQNGSLEEWLHQRDDQ--------LGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLL 845 (1009)
Q Consensus 774 ~~~~~~lv~e~~~~gsL~~~l~~~~~~--------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill 845 (1009)
...++||||+++++|.+++...... .....+++.++..++.|++.|+.|||++ +++||||||+||++
T Consensus 81 --~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili 155 (280)
T cd05049 81 --DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLV 155 (280)
T ss_pred --CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEE
Confidence 6789999999999999999865421 1223488999999999999999999999 99999999999999
Q ss_pred CCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccc
Q 047768 846 DHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMF 924 (1009)
Q Consensus 846 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~ 924 (1009)
+.++.+|++|||+++........ .......+++.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 156 ~~~~~~kl~d~g~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~ 229 (280)
T cd05049 156 GYDLVVKIGDFGMSRDVYTTDYY------RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLS 229 (280)
T ss_pred cCCCeEEECCcccceecccCcce------ecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCC
Confidence 99999999999999765432110 11112345788999999999999999999999999999999 999986432
Q ss_pred cCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 047768 925 NEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLC 998 (1009)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~ 998 (1009)
.. ....... ....... .......+.+++.+||+.||++||++.||++.|+
T Consensus 230 ~~-----~~~~~~~--------~~~~~~~-----------~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 230 NE-----EVIECIT--------QGRLLQR-----------PRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HH-----HHHHHHH--------cCCcCCC-----------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 21 1111110 0000000 0123356889999999999999999999999885
No 106
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.9e-35 Score=345.25 Aligned_cols=263 Identities=24% Similarity=0.299 Sum_probs=205.3
Q ss_pred HhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeecccc---C
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSIDF---K 773 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---~ 773 (1009)
..++|.+.+.||+|+||+||+|++..+++.||||+++.... .....+.+|+..+..++|+|++++...+...+. .
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 45689999999999999999999998999999999965432 223567889999999999999998876543211 1
Q ss_pred CCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEE
Q 047768 774 GVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHV 853 (1009)
Q Consensus 774 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl 853 (1009)
.....++||||+++|+|.++++.+... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~--~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL 184 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKT--NRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKL 184 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEE
Confidence 112468999999999999999764321 23488999999999999999999999 9999999999999999999999
Q ss_pred eccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHH
Q 047768 854 SDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEF 933 (1009)
Q Consensus 854 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~ 933 (1009)
+|||+++....... ........||+.|+|||++.+..++.++|||||||++|||++|+.||... ...+.
T Consensus 185 ~DFGls~~~~~~~~------~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~-----~~~~~ 253 (496)
T PTZ00283 185 GDFGFSKMYAATVS------DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE-----NMEEV 253 (496)
T ss_pred EecccCeecccccc------ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC-----CHHHH
Confidence 99999987643211 11123457999999999999999999999999999999999999999642 22222
Q ss_pred HHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 934 AKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 934 ~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
....... ...+. +.....++.+++.+||+.||++||++.++++.
T Consensus 254 ~~~~~~~--------~~~~~-----------~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 254 MHKTLAG--------RYDPL-----------PPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HHHHhcC--------CCCCC-----------CCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 2211111 01000 11233467899999999999999999999864
No 107
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.6e-35 Score=321.29 Aligned_cols=256 Identities=21% Similarity=0.307 Sum_probs=201.5
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
.++|++.+.||+|+||.||+|+...+++.||+|+++.......+.+.+|+.++++++||||+++++++... ...+
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~-----~~~~ 82 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSR-----EKLW 82 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeC-----CEEE
Confidence 35799999999999999999999889999999999765444556788999999999999999999987543 6789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+|+||+++++|.++++... .+++.++..++.|++.|+.|||+. +|+|||++|+||+++.++.+||+|||++
T Consensus 83 iv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~ 153 (267)
T cd06646 83 ICMEYCGGGSLQDIYHVTG------PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVA 153 (267)
T ss_pred EEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccc
Confidence 9999999999999987644 388999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccC---CCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHH
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGL---GGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKR 936 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 936 (1009)
+...... .......|+..|+|||.+. ...++.++|||||||++|||++|+.||....... .
T Consensus 154 ~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~----~---- 217 (267)
T cd06646 154 AKITATI--------AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR----A---- 217 (267)
T ss_pred eeecccc--------cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhh----h----
Confidence 8654221 1122346889999999874 3457889999999999999999999985332110 0
Q ss_pred hccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 047768 937 ALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKL 997 (1009)
Q Consensus 937 ~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L 997 (1009)
........... +. . .....+..++.+++.+|++.+|++||+++++++.+
T Consensus 218 -----~~~~~~~~~~~-~~--~----~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 218 -----LFLMSKSNFQP-PK--L----KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred -----heeeecCCCCC-CC--C----ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 00000000000 00 0 00112345688999999999999999999998653
No 108
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.8e-35 Score=333.51 Aligned_cols=208 Identities=24% Similarity=0.339 Sum_probs=175.1
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
++|++.+.||+|+||+||+|..+.+++.||||+++... ......+.+|++++.+++|++|+++++++.. ...
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~-----~~~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQD-----KLN 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEec-----CCe
Confidence 46888999999999999999999899999999996432 1223567889999999999999999998654 367
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++||||+++|+|.+++.+.. .+++.++..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFG 146 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLMKKD------TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFG 146 (363)
T ss_pred EEEEEcCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeecc
Confidence 899999999999999998654 389999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCcc---------------------------ccCCccccccccccccCccccCCCCCCCcccchHHHHHH
Q 047768 858 LAKFLSASPLGNVV---------------------------ETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILL 910 (1009)
Q Consensus 858 la~~~~~~~~~~~~---------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl 910 (1009)
+++........... ..........||+.|+|||++.+..++.++|||||||++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil 226 (363)
T cd05628 147 LCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (363)
T ss_pred CcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHH
Confidence 99865432100000 000011245799999999999999999999999999999
Q ss_pred HHHHhCCCCCcc
Q 047768 911 LEIFTRRRPTES 922 (1009)
Q Consensus 911 ~elltg~~p~~~ 922 (1009)
|||++|+.||..
T Consensus 227 ~ell~G~~Pf~~ 238 (363)
T cd05628 227 YEMLIGYPPFCS 238 (363)
T ss_pred HHHHhCCCCCCC
Confidence 999999999974
No 109
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=3.8e-35 Score=334.50 Aligned_cols=207 Identities=22% Similarity=0.323 Sum_probs=173.3
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
.|.+.+.||+|+||+||+|+++.+++.||||+++... ......+.+|++++++++||||+++++++.. ....
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~-----~~~~ 76 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQD-----KDNL 76 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEec-----CCEE
Confidence 5788899999999999999999999999999996542 2224568899999999999999999998754 3678
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++++||+|||+
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~------~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl 147 (381)
T cd05626 77 YFVMDYIPGGDMMSLLIRME------VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGL 147 (381)
T ss_pred EEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcC
Confidence 99999999999999997654 288899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCCcc---------------------------------------ccCCccccccccccccCccccCCCCCCC
Q 047768 859 AKFLSASPLGNVV---------------------------------------ETPSSSIGVKGTIGYVAPEYGLGGEASM 899 (1009)
Q Consensus 859 a~~~~~~~~~~~~---------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 899 (1009)
++........... ..........||+.|+|||++.+..++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (381)
T cd05626 148 CTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQ 227 (381)
T ss_pred CcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCC
Confidence 8644211000000 0000112357999999999999999999
Q ss_pred cccchHHHHHHHHHHhCCCCCcc
Q 047768 900 RGGVYSYGILLLEIFTRRRPTES 922 (1009)
Q Consensus 900 ~~DvwS~Gvvl~elltg~~p~~~ 922 (1009)
++|||||||++|||++|+.||..
T Consensus 228 ~~DiwSlG~il~elltG~~Pf~~ 250 (381)
T cd05626 228 LCDWWSVGVILFEMLVGQPPFLA 250 (381)
T ss_pred ccceeehhhHHHHHHhCCCCCcC
Confidence 99999999999999999999974
No 110
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=2.5e-35 Score=321.58 Aligned_cols=262 Identities=21% Similarity=0.370 Sum_probs=201.1
Q ss_pred HhccCccCCcccccCCceEEEEEEe-----cCCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeecccc
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLH-----ENGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDF 772 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 772 (1009)
..++|++.+.||+|+||.||+|.++ .++..||||+++.... .....+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~--- 80 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ--- 80 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC---
Confidence 4567999999999999999999875 2357899999854322 234568899999999999999999998754
Q ss_pred CCCceEEEEEeccCCCCHHHHHhccCCCC----CccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCC
Q 047768 773 KGVDFKALVYEYMQNGSLEEWLHQRDDQL----GICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHD 848 (1009)
Q Consensus 773 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~ 848 (1009)
....++||||+++|+|.+++....... ....+++..+..++.|++.|++|||+. +++||||||+||+++++
T Consensus 81 --~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~ 155 (277)
T cd05062 81 --GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 155 (277)
T ss_pred --CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCC
Confidence 357899999999999999997643211 122467889999999999999999998 99999999999999999
Q ss_pred CceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCC
Q 047768 849 MVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEG 927 (1009)
Q Consensus 849 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~ 927 (1009)
+.+|++|||+++......... ......+++.|+|||++.++.++.++|||||||++|||++ |+.||....
T Consensus 156 ~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~--- 226 (277)
T cd05062 156 FTVKIGDFGMTRDIYETDYYR------KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMS--- 226 (277)
T ss_pred CCEEECCCCCccccCCcceee------cCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC---
Confidence 999999999998654322110 1111345788999999999999999999999999999999 788886432
Q ss_pred ccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 047768 928 LTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLC 998 (1009)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~ 998 (1009)
..+...... .......+ ..++..+.+++.+|++.+|++|||+.|+++.|+
T Consensus 227 --~~~~~~~~~--------~~~~~~~~-----------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 227 --NEQVLRFVM--------EGGLLDKP-----------DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred --HHHHHHHHH--------cCCcCCCC-----------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 112111111 11110001 123346889999999999999999999999876
No 111
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.9e-35 Score=335.78 Aligned_cols=259 Identities=21% Similarity=0.285 Sum_probs=197.9
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
++|++.+.||+|+||+||+|++..+++.||||+++... ......+.+|+++++.++||||+++++++.. ...
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-----~~~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQD-----ENY 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc-----CCe
Confidence 46889999999999999999999899999999997542 2233567889999999999999999998654 378
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 146 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLMKKD------TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFG 146 (364)
T ss_pred EEEEECCCCCcHHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecc
Confidence 899999999999999997654 289999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCcccc------------------------------CCccccccccccccCccccCCCCCCCcccchHHH
Q 047768 858 LAKFLSASPLGNVVET------------------------------PSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYG 907 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G 907 (1009)
+++.+........... ........||+.|+|||++.+..++.++||||||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 226 (364)
T cd05599 147 LCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLG 226 (364)
T ss_pred cceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecch
Confidence 9976533211000000 0011134699999999999999999999999999
Q ss_pred HHHHHHHhCCCCCcccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCC
Q 047768 908 ILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDR 987 (1009)
Q Consensus 908 vvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~R 987 (1009)
|++|||++|+.||..... .+....... .. ..+ ..+. .....+++.+++.+|+. +|.+|
T Consensus 227 ~il~el~~G~~Pf~~~~~-----~~~~~~i~~-----~~-~~~-~~~~---------~~~~s~~~~~li~~ll~-~p~~R 284 (364)
T cd05599 227 VIMYEMLVGYPPFCSDNP-----QETYRKIIN-----WK-ETL-QFPD---------EVPLSPEAKDLIKRLCC-EAERR 284 (364)
T ss_pred hHHHHhhcCCCCCCCCCH-----HHHHHHHHc-----CC-Ccc-CCCC---------CCCCCHHHHHHHHHHcc-CHhhc
Confidence 999999999999974321 111111100 00 000 0000 00112346678888886 89999
Q ss_pred CC---HHHHHH
Q 047768 988 ME---MTDVVV 995 (1009)
Q Consensus 988 pt---~~evl~ 995 (1009)
++ +.|+++
T Consensus 285 ~~~~~~~~ll~ 295 (364)
T cd05599 285 LGNNGVNEIKS 295 (364)
T ss_pred CCCCCHHHHhc
Confidence 98 888765
No 112
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=2.8e-35 Score=328.47 Aligned_cols=243 Identities=21% Similarity=0.297 Sum_probs=189.1
Q ss_pred CcccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCCCceEEEEE
Q 047768 707 NTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKGVDFKALVY 782 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 782 (1009)
+.||+|+||.||+|+++.+++.||+|+++.... ...+.+.+|+.++.++ +||||+++++++.. ....++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~-----~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-----ESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEe-----CCEEEEEE
Confidence 469999999999999998999999999975422 2235677899888877 89999999998654 36789999
Q ss_pred eccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccccc
Q 047768 783 EYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 862 (1009)
Q Consensus 783 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~ 862 (1009)
||+++|+|.+++.... .+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 E~~~~~~L~~~~~~~~------~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~ 146 (329)
T cd05618 76 EYVNGGDLMFHMQRQR------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 146 (329)
T ss_pred eCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccc
Confidence 9999999999887654 389999999999999999999999 9999999999999999999999999998753
Q ss_pred CCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCC---ccHHHHHHHhcc
Q 047768 863 SASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEG---LTLHEFAKRALP 939 (1009)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~---~~~~~~~~~~~~ 939 (1009)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....+.....
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i- 217 (329)
T cd05618 147 LRPG--------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI- 217 (329)
T ss_pred cCCC--------CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHH-
Confidence 2211 11224578999999999999999999999999999999999999996422111 11111111110
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEM 990 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~ 990 (1009)
..... ..+ .....++.+++.+|++.||++||++
T Consensus 218 ------~~~~~-~~p-----------~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 218 ------LEKQI-RIP-----------RSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred ------hcCCC-CCC-----------CCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 00000 001 1122356799999999999999984
No 113
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=4.8e-35 Score=315.20 Aligned_cols=250 Identities=26% Similarity=0.396 Sum_probs=194.8
Q ss_pred cccccCCceEEEEEEe--cCCeEEEEEEeeccccc-chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEec
Q 047768 708 TIGRGSFGFVYKGVLH--ENGMLVAVKVINLEQKG-GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYEY 784 (1009)
Q Consensus 708 ~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~ 784 (1009)
.||+|+||.||+|.++ ..+..||+|++...... ..+.+.+|+.++++++||||+++++++.. ...++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~------~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA------EALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC------CCeEEEEEe
Confidence 3899999999999875 44567999998654322 24568899999999999999999998642 457899999
Q ss_pred cCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccCC
Q 047768 785 MQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSA 864 (1009)
Q Consensus 785 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~ 864 (1009)
+++++|.+++..... .+++.++..++.|++.|++|||++ +++||||||+||+++.++.+|++|||+++....
T Consensus 76 ~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 147 (257)
T cd05115 76 ASGGPLNKFLSGKKD-----EITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGA 147 (257)
T ss_pred CCCCCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccC
Confidence 999999999976443 389999999999999999999998 999999999999999999999999999975543
Q ss_pred CCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhccchhh
Q 047768 865 SPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRALPEKVM 943 (1009)
Q Consensus 865 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1009)
..... .......++..|+|||++....++.++|||||||++||+++ |+.||...... .+..
T Consensus 148 ~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~-------- 209 (257)
T cd05115 148 DDSYY-----KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP-----EVMS-------- 209 (257)
T ss_pred Cccce-----eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH-----HHHH--------
Confidence 21100 11112234678999999988889999999999999999997 99998754221 1111
Q ss_pred hccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 047768 944 EIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHA 1000 (1009)
Q Consensus 944 ~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i 1000 (1009)
.+...... ..+..+..++.+++.+||..+|++||++.+|.+.|+.+
T Consensus 210 -~~~~~~~~----------~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 210 -FIEQGKRL----------DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred -HHHCCCCC----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 11110000 00112345678999999999999999999999998865
No 114
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.1e-35 Score=334.50 Aligned_cols=255 Identities=20% Similarity=0.255 Sum_probs=198.7
Q ss_pred HhccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCC
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 775 (1009)
..++|++.+.||+|+||.||+|+.+.+++.||+|+++... ....+.+.+|+.+++.++||||+++++++.. .
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~-----~ 115 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQD-----D 115 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEec-----C
Confidence 4568999999999999999999999899999999996432 2233557889999999999999999988654 3
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
...++||||+++|+|.+++.... +++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~~~-------l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~D 185 (370)
T cd05596 116 KYLYMVMEYMPGGDLVNLMSNYD-------IPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLAD 185 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEe
Confidence 67899999999999999987643 77888899999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCCC----CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHH
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG----EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLH 931 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~ 931 (1009)
||+++....... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||..... .
T Consensus 186 fG~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-----~ 253 (370)
T cd05596 186 FGTCMKMDANGM-------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-----V 253 (370)
T ss_pred ccceeeccCCCc-------ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH-----H
Confidence 999986543211 112235699999999988653 478999999999999999999999974321 1
Q ss_pred HHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 047768 932 EFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFD--RMEMTDVVVK 996 (1009)
Q Consensus 932 ~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~--Rpt~~evl~~ 996 (1009)
.......... . .+. .+. ......++.+++.+|++.+|++ ||++.|+++.
T Consensus 254 ~~~~~i~~~~-----~-~~~-~~~---------~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 254 GTYSKIMDHK-----N-SLT-FPD---------DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred HHHHHHHcCC-----C-cCC-CCC---------cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 1111111000 0 000 000 0012345678999999999987 9999999754
No 115
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=3.8e-35 Score=315.36 Aligned_cols=249 Identities=27% Similarity=0.383 Sum_probs=195.2
Q ss_pred CcccccCCceEEEEEEecCCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEecc
Q 047768 707 NTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYEYM 785 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 785 (1009)
+.||+|+||.||+|.++.+++.||+|.+..... .....+.+|++++++++||||+++++++... ...++||||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK-----QPIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-----CCeEEEEeec
Confidence 469999999999999998999999998753322 2345789999999999999999999997543 5689999999
Q ss_pred CCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccCCC
Q 047768 786 QNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSAS 865 (1009)
Q Consensus 786 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 865 (1009)
++++|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+|++|||+++.....
T Consensus 76 ~~~~L~~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 147 (252)
T cd05084 76 QGGDFLTFLRTEGP-----RLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDG 147 (252)
T ss_pred cCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccc
Confidence 99999999976543 388999999999999999999999 9999999999999999999999999998764432
Q ss_pred CCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhccchhhh
Q 047768 866 PLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRALPEKVME 944 (1009)
Q Consensus 866 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 944 (1009)
... .......++..|+|||.+.++.++.++|||||||++|||++ |..||...... .. ..
T Consensus 148 ~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~-----~~---------~~ 207 (252)
T cd05084 148 VYA------STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ-----QT---------RE 207 (252)
T ss_pred ccc------ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH-----HH---------HH
Confidence 110 00111223567999999999999999999999999999998 88888643211 00 01
Q ss_pred ccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 047768 945 IVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLC 998 (1009)
Q Consensus 945 ~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~ 998 (1009)
.+...... .....++..+.+++.+|++.+|++|||+.|+.++|.
T Consensus 208 ~~~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 208 AIEQGVRL----------PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHcCCCC----------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 11110000 001123456889999999999999999999999875
No 116
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=3.5e-35 Score=317.41 Aligned_cols=255 Identities=24% Similarity=0.420 Sum_probs=201.5
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
.++|++.++||+|+||.||+|... ++..||+|.+.... ...+.+.+|+.++++++|+||+++++++.. ....+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 77 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTK-----EEPIY 77 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcC-----CCCcE
Confidence 457889999999999999999975 66789999876432 235688999999999999999999988654 36679
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+||||+++|+|.++++.... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|||++
T Consensus 78 lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~ 150 (261)
T cd05072 78 IITEYMAKGSLLDFLKSDEG----GKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLA 150 (261)
T ss_pred EEEecCCCCcHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccc
Confidence 99999999999999976432 2478889999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
+....... .......++..|+|||+.....++.++|||||||++|||+| |+.||...... ......
T Consensus 151 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~-----~~~~~~- 217 (261)
T cd05072 151 RVIEDNEY-------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS-----DVMSAL- 217 (261)
T ss_pred eecCCCce-------eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH-----HHHHHH-
Confidence 87643211 11122345778999999998899999999999999999999 99998643211 111110
Q ss_pred cchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 047768 939 PEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCH 999 (1009)
Q Consensus 939 ~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~ 999 (1009)
.. .... + ....++.++.+++.+|+..+|++||+++++.+.|+.
T Consensus 218 ~~--------~~~~-~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 218 QR--------GYRM-P---------RMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred Hc--------CCCC-C---------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 00 0000 0 001233467899999999999999999999999875
No 117
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.2e-35 Score=326.23 Aligned_cols=241 Identities=22% Similarity=0.294 Sum_probs=188.4
Q ss_pred CcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCCCceEEEEE
Q 047768 707 NTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKGVDFKALVY 782 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 782 (1009)
+.||+|+||+||+|++..+++.||||+++... ....+.+..|..++... +||||+++++++.. ....++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~-----~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQT-----KEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEc-----CCEEEEEE
Confidence 46999999999999999899999999997542 22234556677777654 89999999988654 36789999
Q ss_pred eccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccccc
Q 047768 783 EYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 862 (1009)
Q Consensus 783 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~ 862 (1009)
||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~gg~L~~~~~~~~------~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~ 146 (316)
T cd05592 76 EYLNGGDLMFHIQSSG------RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKEN 146 (316)
T ss_pred cCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeEC
Confidence 9999999999997654 288999999999999999999999 9999999999999999999999999999754
Q ss_pred CCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchh
Q 047768 863 SASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKV 942 (1009)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 942 (1009)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+........
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~-----~~~~~~i~~~-- 211 (316)
T cd05592 147 MNGE--------GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE-----DELFDSILND-- 211 (316)
T ss_pred CCCC--------CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHcC--
Confidence 3221 122345689999999999999999999999999999999999999974321 1111111000
Q ss_pred hhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHH-HHH
Q 047768 943 MEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMT-DVV 994 (1009)
Q Consensus 943 ~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~-evl 994 (1009)
....+ .....++.+++.+|++.||++||++. ++.
T Consensus 212 -------~~~~~-----------~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 212 -------RPHFP-----------RWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred -------CCCCC-----------CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 00000 01223467899999999999999876 443
No 118
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2.6e-35 Score=328.57 Aligned_cols=240 Identities=24% Similarity=0.292 Sum_probs=188.6
Q ss_pred CccCCcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHH---HhcCCCCcceEEeeeeccccCCCc
Q 047768 703 FSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEAL---RSIRHRNLIKIVTICSSIDFKGVD 776 (1009)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~~~ 776 (1009)
|.+.+.||+|+||.||+|.++.+++.||||+++... ....+.+.+|++++ ++++||||+++++++.. ..
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~-----~~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQT-----ED 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEc-----CC
Confidence 567889999999999999999899999999997442 22235566776665 45689999999998654 36
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
..++||||+++|+|..+++.. .+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+||
T Consensus 76 ~~~lv~E~~~~~~L~~~~~~~-------~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Df 145 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIHTD-------VFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADF 145 (324)
T ss_pred EEEEEEcCCCCCcHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcc
Confidence 889999999999999888653 289999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHH
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKR 936 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 936 (1009)
|+++...... .......|++.|+|||++.+..++.++|||||||++|||++|+.||..... ......
T Consensus 146 g~~~~~~~~~--------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~-----~~~~~~ 212 (324)
T cd05589 146 GLCKEGMGFG--------DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE-----EEVFDS 212 (324)
T ss_pred cCCccCCCCC--------CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH-----HHHHHH
Confidence 9987532211 122346789999999999999999999999999999999999999974321 111111
Q ss_pred hccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCH
Q 047768 937 ALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEM 990 (1009)
Q Consensus 937 ~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~ 990 (1009)
. ...... .+ ......+.+++.+|++.||.+||++
T Consensus 213 i--------~~~~~~-~p-----------~~~~~~~~~li~~~L~~dP~~R~~~ 246 (324)
T cd05589 213 I--------VNDEVR-YP-----------RFLSREAISIMRRLLRRNPERRLGS 246 (324)
T ss_pred H--------HhCCCC-CC-----------CCCCHHHHHHHHHHhhcCHhHcCCC
Confidence 1 000000 00 0123456799999999999999953
No 119
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=3.8e-35 Score=327.60 Aligned_cols=243 Identities=21% Similarity=0.285 Sum_probs=189.6
Q ss_pred CcccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCCCceEEEEE
Q 047768 707 NTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKGVDFKALVY 782 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 782 (1009)
+.||+|+||.||+|+++.+++.||||+++.... ...+.+.+|+.+++++ +||||+++++++.. ....++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~-----~~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQT-----ESRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEc-----CCEEEEEE
Confidence 469999999999999998999999999975422 2235678899999998 79999999998654 36789999
Q ss_pred eccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccccc
Q 047768 783 EYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 862 (1009)
Q Consensus 783 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~ 862 (1009)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~g~L~~~~~~~~------~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~ 146 (329)
T cd05588 76 EFVSGGDLMFHMQRQR------KLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 146 (329)
T ss_pred eCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCcccccc
Confidence 9999999999887654 389999999999999999999999 9999999999999999999999999998743
Q ss_pred CCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCC---ccHHHHHHHhcc
Q 047768 863 SASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEG---LTLHEFAKRALP 939 (1009)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~---~~~~~~~~~~~~ 939 (1009)
... ........||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....+.....
T Consensus 147 ~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~- 217 (329)
T cd05588 147 IRP--------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVI- 217 (329)
T ss_pred ccC--------CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHH-
Confidence 211 112234578999999999999999999999999999999999999996422111 11111111111
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEM 990 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~ 990 (1009)
..... ..+ .....++.+++.+|++.||.+||++
T Consensus 218 ------~~~~~-~~p-----------~~~~~~~~~li~~~L~~dP~~R~~~ 250 (329)
T cd05588 218 ------LEKQI-RIP-----------RSLSVKASSVLKGFLNKDPKERLGC 250 (329)
T ss_pred ------HcCCC-CCC-----------CCCCHHHHHHHHHHhccCHHHcCCC
Confidence 01000 000 0122357799999999999999983
No 120
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=4.8e-35 Score=320.35 Aligned_cols=253 Identities=23% Similarity=0.303 Sum_probs=198.0
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
.|++.+.||+|+||+||+|.+..+++.||||++..... .....+.+|++++++++||||+++++++.. ....
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 75 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET-----KDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecC-----CCeE
Confidence 37788999999999999999988899999999864321 123457789999999999999999988654 3678
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
++||||+++|+|.+++..... ..+++..+..++.|++.|+.|||+. +|+||||||+||++++++.++|+|||+
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05605 76 CLVLTLMNGGDLKFHIYNMGN----PGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGL 148 (285)
T ss_pred EEEEeccCCCcHHHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCC
Confidence 999999999999988865432 2489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhc
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
++...... ......|++.|+|||++.+..++.++||||+||++|||++|+.||...... .....+ ...
T Consensus 149 ~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~-~~~~~~-~~~- 216 (285)
T cd05605 149 AVEIPEGE---------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK-VKREEV-ERR- 216 (285)
T ss_pred ceecCCCC---------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh-hHHHHH-HHH-
Confidence 98654221 112346899999999999999999999999999999999999999742211 001111 100
Q ss_pred cchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 047768 939 PEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRM-----EMTDVVVK 996 (1009)
Q Consensus 939 ~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rp-----t~~evl~~ 996 (1009)
+....... .......+.+++.+|++.||++|| +++++++.
T Consensus 217 -------~~~~~~~~-----------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 217 -------VKEDQEEY-----------SEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred -------hhhccccc-----------CcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 00000000 012234578999999999999999 78888653
No 121
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.3e-35 Score=331.08 Aligned_cols=243 Identities=22% Similarity=0.260 Sum_probs=192.7
Q ss_pred CcccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEe
Q 047768 707 NTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYE 783 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 783 (1009)
+.||+|+||.||+|....+++.||+|+++.... .....+.+|+++++.++||||+++.+++.. ....++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~-----~~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT-----HDRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEc-----CCEEEEEEe
Confidence 469999999999999988999999999975422 223567789999999999999999988654 367899999
Q ss_pred ccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhh-cCCCCceecCCCCCceeeCCCCceEEecccccccc
Q 047768 784 YMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHH-HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 862 (1009)
Q Consensus 784 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~ 862 (1009)
|+++|+|.+++.... .+++.++..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 ~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~ 146 (325)
T cd05594 76 YANGGELFFHLSRER------VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 146 (325)
T ss_pred CCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeec
Confidence 999999999887654 38999999999999999999997 6 9999999999999999999999999998753
Q ss_pred CCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchh
Q 047768 863 SASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKV 942 (1009)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 942 (1009)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...........
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~-----~~~~~~i~~~~- 212 (325)
T cd05594 147 IKDG--------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFELILMEE- 212 (325)
T ss_pred CCCC--------cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH-----HHHHHHHhcCC-
Confidence 2211 112235689999999999999999999999999999999999999964321 11111110000
Q ss_pred hhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 047768 943 MEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRM-----EMTDVVVK 996 (1009)
Q Consensus 943 ~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rp-----t~~evl~~ 996 (1009)
. ..+ .....++.+++.+|++.||++|+ ++.|+++.
T Consensus 213 -------~-~~p-----------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 213 -------I-RFP-----------RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred -------C-CCC-----------CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 0 000 01223567899999999999997 89888753
No 122
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=3.3e-35 Score=316.35 Aligned_cols=252 Identities=25% Similarity=0.408 Sum_probs=199.1
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
++|.+.+.||+|+||+||+|.+. ++..||||.++... ...+.+.+|+.++++++||||+++++++... ...++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~l 76 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQ-----RPIYI 76 (256)
T ss_pred HHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccC-----CCcEE
Confidence 46888899999999999999886 45679999886432 2356789999999999999999999997543 56799
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
||||+++|+|.+++..... .+++.+++.++.|++.|++|||+. +++|+||||+||+++.++.+||+|||.++
T Consensus 77 v~e~~~~~~l~~~i~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~ 148 (256)
T cd05113 77 VTEYMSNGCLLNYLREHGK-----RFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSR 148 (256)
T ss_pred EEEcCCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccce
Confidence 9999999999999976543 389999999999999999999999 99999999999999999999999999988
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhcc
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
....... .......++..|+|||+..+..++.++|||||||++|||++ |+.||...... ......
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~-----~~~~~~-- 214 (256)
T cd05113 149 YVLDDEY-------TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS-----ETVEKV-- 214 (256)
T ss_pred ecCCCce-------eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-----HHHHHH--
Confidence 6543211 11122346678999999988889999999999999999999 99998643211 111110
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLC 998 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~ 998 (1009)
........+ ......+.+++.+||+.+|++||++.++++.++
T Consensus 215 ------~~~~~~~~~-----------~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 215 ------SQGLRLYRP-----------HLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred ------hcCCCCCCC-----------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 000000000 012346789999999999999999999998763
No 123
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=6.8e-35 Score=315.10 Aligned_cols=255 Identities=31% Similarity=0.463 Sum_probs=202.2
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
.++|++.+.||+|+||.||+|.+. +++.||||.++... ...+.+.+|++++++++||||+++++++... ...+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 77 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLE-----EPIY 77 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecC-----CCee
Confidence 356888999999999999999975 56789999986433 2356789999999999999999999986543 5689
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+||||+++++|.+++..... ..+++.++..++.|++.|+.|||+. +|+||||||+||++++++.+||+|||++
T Consensus 78 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~ 150 (261)
T cd05068 78 IVTELMKYGSLLEYLQGGAG----RALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLA 150 (261)
T ss_pred eeeecccCCcHHHHHhccCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceE
Confidence 99999999999999976541 2489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
+....... ....+...+..|+|||+..+..++.++||||||+++|||++ |+.||..... ......
T Consensus 151 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----~~~~~~-- 216 (261)
T cd05068 151 RVIKEDIY-------EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN-----AEVLQQ-- 216 (261)
T ss_pred EEccCCcc-------cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHH--
Confidence 87653211 11112234568999999999999999999999999999999 9999864321 111111
Q ss_pred cchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 047768 939 PEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCH 999 (1009)
Q Consensus 939 ~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~ 999 (1009)
++..... .....+...+.+++.+|++.+|++||++.++.+.|+.
T Consensus 217 -------~~~~~~~----------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 217 -------VDQGYRM----------PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred -------HHcCCCC----------CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 0000000 0001233568899999999999999999999999875
No 124
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=5.2e-35 Score=317.43 Aligned_cols=259 Identities=29% Similarity=0.481 Sum_probs=202.9
Q ss_pred hccCccCCcccccCCceEEEEEEecCCe---EEEEEEeeccc-ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCC
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGM---LVAVKVINLEQ-KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~---~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 775 (1009)
.++|+..+.||+|+||.||+|..+.++. .||+|.++... ....+.+..|++++++++|||++++.+++...
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 78 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKF----- 78 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccC-----
Confidence 3578888999999999999999875543 79999886442 22345788999999999999999999987543
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
+..++||||+++++|.+++..... .+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~d 150 (268)
T cd05063 79 KPAMIITEYMENGALDKYLRDHDG-----EFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSD 150 (268)
T ss_pred CCcEEEEEcCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECC
Confidence 668999999999999999976543 389999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHH
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFA 934 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~ 934 (1009)
||++.......... ........+..|+|||++.+..++.++|||||||++|||++ |+.||..... .+..
T Consensus 151 fg~~~~~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~-----~~~~ 220 (268)
T cd05063 151 FGLSRVLEDDPEGT-----YTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN-----HEVM 220 (268)
T ss_pred Cccceecccccccc-----eeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH-----HHHH
Confidence 99998664322100 11112233567999999998899999999999999999998 9999864321 1111
Q ss_pred HHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 047768 935 KRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHA 1000 (1009)
Q Consensus 935 ~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i 1000 (1009)
... ......+ ...+++.++.+++.+|++.+|++||++.+|++.|+++
T Consensus 221 ~~i--------~~~~~~~-----------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 221 KAI--------NDGFRLP-----------APMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred HHH--------hcCCCCC-----------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 111 0000000 0113345688999999999999999999999999875
No 125
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3.2e-35 Score=326.91 Aligned_cols=238 Identities=24% Similarity=0.290 Sum_probs=189.4
Q ss_pred CcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCCCceEEEEE
Q 047768 707 NTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKGVDFKALVY 782 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 782 (1009)
+.||+|+||+||+|+++.+++.||||+++... ....+.+..|++++... +||||+++++++.. ....++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~-----~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQT-----PDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEc-----CCEEEEEE
Confidence 46999999999999999899999999996432 22345677888888876 69999999998654 36789999
Q ss_pred eccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccccc
Q 047768 783 EYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 862 (1009)
Q Consensus 783 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~ 862 (1009)
||+++|+|.+++..... +++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 Ey~~~g~L~~~i~~~~~------l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~ 146 (320)
T cd05590 76 EFVNGGDLMFHIQKSRR------FDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 146 (320)
T ss_pred cCCCCchHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeec
Confidence 99999999999876543 88999999999999999999999 9999999999999999999999999998754
Q ss_pred CCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchh
Q 047768 863 SASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKV 942 (1009)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 942 (1009)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .............
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~-----~~~~~~~i~~~~~ 213 (320)
T cd05590 147 IFNG--------KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN-----EDDLFEAILNDEV 213 (320)
T ss_pred CcCC--------CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC-----HHHHHHHHhcCCC
Confidence 2211 12233568999999999999999999999999999999999999997432 1122111111100
Q ss_pred hhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHH
Q 047768 943 MEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMT 991 (1009)
Q Consensus 943 ~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~ 991 (1009)
..+ .....++.+++.+|++.||++||++.
T Consensus 214 ---------~~~-----------~~~~~~~~~li~~~L~~dP~~R~~~~ 242 (320)
T cd05590 214 ---------VYP-----------TWLSQDAVDILKAFMTKNPTMRLGSL 242 (320)
T ss_pred ---------CCC-----------CCCCHHHHHHHHHHcccCHHHCCCCC
Confidence 000 01223567999999999999999983
No 126
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=8.9e-38 Score=336.11 Aligned_cols=362 Identities=24% Similarity=0.378 Sum_probs=215.5
Q ss_pred cCeEeecCccCC-CCCCcccCCccccceeecccCcccCCCCcccccccccccccccCccCCCCCCCcccCCChHHHHHhh
Q 047768 170 LQGLSVGDNQLT-GQLPASIGNLSALRVIDIRTNRLWGKIPITLSQLTSLAYLHVGDNHFSGTIPPSVYNISSLVEIYLY 248 (1009)
Q Consensus 170 L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 248 (1009)
.+-.|+++|.++ +..|.....+++++.|.|...++ ..+|..++.+.+|++|.+++|++. .+-..+..|+.|+.+.+.
T Consensus 9 VrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L-~~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R 86 (1255)
T KOG0444|consen 9 VRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKL-EQVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVR 86 (1255)
T ss_pred eecccccCCcCCCCcCchhHHHhhheeEEEechhhh-hhChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhh
Confidence 344566666666 35577777777777777777777 467777888888888888888777 566677778888888888
Q ss_pred CCccCC-CCChhhccCCCcccceeccccccCCCCCCCcCcccccccccccccccccccccccccccccccccccccccCC
Q 047768 249 GNRFTG-SLPIEIGKNLPNLRNFVIYTNNFTGSLPDSFSNASNLEVLHLAENQFRGQVSINFNGLKDLSMLGLATNFLGN 327 (1009)
Q Consensus 249 ~N~l~~-~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~ 327 (1009)
.|++.. -||..+|. +..|+.||||+|+++ ..|..+...+++-+|+||+|+|..++...|.+|..|-.||||+|++..
T Consensus 87 ~N~LKnsGiP~diF~-l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~ 164 (1255)
T KOG0444|consen 87 DNNLKNSGIPTDIFR-LKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEM 164 (1255)
T ss_pred ccccccCCCCchhcc-cccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhhh
Confidence 887753 47777775 788888888888887 567777777888888888888887777666666666666666666654
Q ss_pred CCCCCcchhhhcccccccceEEccCCCCCCcCchhhhhhcccceEEEcCCCccccCCCccccCcCccCEEEccCCCCC-C
Q 047768 328 GAANDLDFVDLLTNCTKLQYLYLADNGFGGVLPHSIANLSTALIDFNLGKNQIYGTIPPGIANLVNLNSLRMEANRLT-G 406 (1009)
Q Consensus 328 ~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~ 406 (1009)
+++ -...+..|+.|+|++|.+. ...-..+..+++|++|.+++.+=+ .
T Consensus 165 LPP-------Q~RRL~~LqtL~Ls~NPL~-------------------------hfQLrQLPsmtsL~vLhms~TqRTl~ 212 (1255)
T KOG0444|consen 165 LPP-------QIRRLSMLQTLKLSNNPLN-------------------------HFQLRQLPSMTSLSVLHMSNTQRTLD 212 (1255)
T ss_pred cCH-------HHHHHhhhhhhhcCCChhh-------------------------HHHHhcCccchhhhhhhcccccchhh
Confidence 433 2344555555555555543 222223334445555555544322 2
Q ss_pred CCCCCcCCcccccceecccccccCCCCcccccccccccccccCcccccccCCCCCCCCCccccccCCCCccCCCchhhhh
Q 047768 407 TIPHVIGELKNLQLLHLHANFLQGTIPSSLGNLTLLTYLSFGANNLQGNIPFSLGNCKNLMFFFAPRNKLTGALPQQILE 486 (1009)
Q Consensus 407 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~ 486 (1009)
-+|.++.++.+|..+|||.|.+. ..|+.+.++.+|+.|+||+|+|+ .+....+...+|++|++++|+++
T Consensus 213 N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt--------- 281 (1255)
T KOG0444|consen 213 NIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT--------- 281 (1255)
T ss_pred cCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc---------
Confidence 34555555555555555555555 45555555555555555555555 33333333344443333333333
Q ss_pred hccceeeEecCCCccCCCCCCCccCCCCCCeeeccccccCC-CccccccCCCCccEEEecCcccccccccccccccccce
Q 047768 487 ITTLSLSLDLSDNLLNGSLPLGVGNLKSLVRLGIARNQFSG-QIPVTLGACTSLEYVELQGNSFSGTIPQSLSSLTSIKE 565 (1009)
Q Consensus 487 ~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 565 (1009)
.+|..++.|++|+.|++.+|+++- -||..+|++.+|+.+..++|++. .+|+.++.+.+|+.
T Consensus 282 -----------------~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~k 343 (1255)
T KOG0444|consen 282 -----------------VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQK 343 (1255)
T ss_pred -----------------cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHH
Confidence 344444445555555555555431 24555555555555555555554 55555555555555
Q ss_pred EcCCCcccccccccccccccccCceecccccC
Q 047768 566 LDLSQNNFSGQIPKYLENLSFLQYLNLSYNHF 597 (1009)
Q Consensus 566 L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l 597 (1009)
|.|++|++- ++|+.+.-|+.|+.|||..|+=
T Consensus 344 L~L~~NrLi-TLPeaIHlL~~l~vLDlreNpn 374 (1255)
T KOG0444|consen 344 LKLDHNRLI-TLPEAIHLLPDLKVLDLRENPN 374 (1255)
T ss_pred hccccccee-echhhhhhcCCcceeeccCCcC
Confidence 555555554 4555555555555555555543
No 127
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.4e-35 Score=335.22 Aligned_cols=260 Identities=23% Similarity=0.313 Sum_probs=202.4
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
++|.+.+.||+|+||+||+|++..+++.||||+++... ......+.+|+++++.++||||+++++++.. ...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQD-----EEH 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheec-----CCe
Confidence 36889999999999999999999899999999997542 2334678899999999999999999987643 467
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++||||+++|+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg 146 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIRKD------VFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFG 146 (350)
T ss_pred EEEEEcCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCC
Confidence 899999999999999998763 388999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCCCCc---------------------cccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhC
Q 047768 858 LAKFLSASPLGNV---------------------VETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTR 916 (1009)
Q Consensus 858 la~~~~~~~~~~~---------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg 916 (1009)
+++.......... ...........||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g 226 (350)
T cd05573 147 LCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYG 226 (350)
T ss_pred CCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccC
Confidence 9987654320000 0001122345689999999999999999999999999999999999
Q ss_pred CCCCcccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCC-HHHHHH
Q 047768 917 RRPTESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRME-MTDVVV 995 (1009)
Q Consensus 917 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt-~~evl~ 995 (1009)
+.||..... ........ ... ..+. .+.. .....++.+++.+|++ ||.+||+ +.|+++
T Consensus 227 ~~Pf~~~~~-----~~~~~~i~-----~~~-~~~~-~p~~---------~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 227 FPPFYSDTL-----QETYNKII-----NWK-ESLR-FPPD---------PPVSPEAIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred CCCCCCCCH-----HHHHHHHh-----ccC-Cccc-CCCC---------CCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 999974321 11111110 000 0000 0000 0123457788999997 9999999 999986
Q ss_pred H
Q 047768 996 K 996 (1009)
Q Consensus 996 ~ 996 (1009)
.
T Consensus 285 h 285 (350)
T cd05573 285 H 285 (350)
T ss_pred C
Confidence 4
No 128
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2.8e-35 Score=340.08 Aligned_cols=277 Identities=21% Similarity=0.282 Sum_probs=196.1
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeecccc---CCCc
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDF---KGVD 776 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---~~~~ 776 (1009)
..+|.+.+.||+|+||+||+|....+++.||||++... .....+|+.+++.++||||+++++++....+ ....
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~----~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD----PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC----cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 45799999999999999999999888999999988432 2345679999999999999999887643222 1223
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCC-ceEEec
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDM-VAHVSD 855 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~-~~kl~D 855 (1009)
..++||||++ +++.+++...... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++ .+||+|
T Consensus 141 ~l~lvmE~~~-~~l~~~~~~~~~~--~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 141 FLNVVMEFIP-QTVHKYMKHYARN--NHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred EEEEEEecCC-ccHHHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeec
Confidence 5679999996 5787777542211 12488999999999999999999999 999999999999998665 799999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHH
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFA 934 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 934 (1009)
||+|+..... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+....
T Consensus 215 FGla~~~~~~---------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~-~~~~~i~ 284 (440)
T PTZ00036 215 FGSAKNLLAG---------QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV-DQLVRII 284 (440)
T ss_pred cccchhccCC---------CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHH
Confidence 9999865432 112235689999999998764 6899999999999999999999999753221 1111111
Q ss_pred HHhccc--hhhhccCCCCCC--hhhh-hhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 935 KRALPE--KVMEIVDPSLLP--LEEE-RTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 935 ~~~~~~--~~~~~~d~~l~~--~~~~-r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
...... +......+.... .+.. ........+.....++.+++.+|++.||.+|||+.|+++.
T Consensus 285 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 285 QVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred HHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 111100 000000100000 0000 0000000111233568899999999999999999999843
No 129
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=6.3e-35 Score=321.57 Aligned_cols=264 Identities=23% Similarity=0.380 Sum_probs=202.9
Q ss_pred ccCccCCcccccCCceEEEEEEecCCe--EEEEEEeeccc-ccchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCCCc
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGM--LVAVKVINLEQ-KGGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKGVD 776 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~ 776 (1009)
++|++.+.||+|+||.||+|..+.++. .+|+|.++... ....+.+.+|+++++++ +||||+++++++... .
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~-----~ 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENR-----G 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccC-----C
Confidence 578899999999999999999876664 47888876322 22345788999999999 799999999986543 5
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCC----------CccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeC
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQL----------GICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLD 846 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~ 846 (1009)
..++|+||+++|+|.+++....... ....+++..+..++.|++.|++|||++ +|+||||||+||+++
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~ 153 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVG 153 (297)
T ss_pred cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEEC
Confidence 6899999999999999997643110 112488999999999999999999998 999999999999999
Q ss_pred CCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCccccc
Q 047768 847 HDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFN 925 (1009)
Q Consensus 847 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~ 925 (1009)
+++.+||+|||++...... ........+..|+|||+..+..++.++|||||||++|||++ |..||.....
T Consensus 154 ~~~~~kl~dfg~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~ 224 (297)
T cd05089 154 ENLASKIADFGLSRGEEVY---------VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC 224 (297)
T ss_pred CCCeEEECCcCCCccccce---------eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 9999999999998643211 00111223567999999999999999999999999999998 9999864321
Q ss_pred CCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhh
Q 047768 926 EGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQNFL 1005 (1009)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~~~~ 1005 (1009)
....... ....... ....+...+.+++.+|++.+|.+||+++++++.|+.+.+.+.
T Consensus 225 -----~~~~~~~---------~~~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~ 280 (297)
T cd05089 225 -----AELYEKL---------PQGYRME----------KPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARK 280 (297)
T ss_pred -----HHHHHHH---------hcCCCCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 1111111 0000000 001233467899999999999999999999999998887654
No 130
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=4.8e-35 Score=326.11 Aligned_cols=242 Identities=22% Similarity=0.300 Sum_probs=191.0
Q ss_pred CcccccCCceEEEEEEe---cCCeEEEEEEeeccc----ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 707 NTIGRGSFGFVYKGVLH---ENGMLVAVKVINLEQ----KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
+.||+|+||.||+|+.. .+++.||||+++... ......+.+|+++++.++||||+++++++.. ....+
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~-----~~~~~ 76 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQT-----GGKLY 76 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEec-----CCeEE
Confidence 67999999999999864 468899999996432 1223467789999999999999999988654 36789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+||||+++|+|.+++..... +.+..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 77 lv~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 147 (323)
T cd05584 77 LILEYLSGGELFMHLEREGI------FMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLC 147 (323)
T ss_pred EEEeCCCCchHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCC
Confidence 99999999999999976542 78888999999999999999999 9999999999999999999999999998
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhcc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ........
T Consensus 148 ~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~-----~~~~~~~~- 213 (323)
T cd05584 148 KESIHEG--------TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR-----KKTIDKIL- 213 (323)
T ss_pred eecccCC--------CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH-----HHHHHHHH-
Confidence 7543211 112235689999999999999999999999999999999999999974321 11111111
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRM-----EMTDVVV 995 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rp-----t~~evl~ 995 (1009)
..... .+ ......+.+++.+|++.||++|| ++.++++
T Consensus 214 -------~~~~~-~~-----------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 214 -------KGKLN-LP-----------PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred -------cCCCC-CC-----------CCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 11100 00 01223567999999999999999 7887765
No 131
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4.1e-35 Score=331.99 Aligned_cols=204 Identities=24% Similarity=0.308 Sum_probs=171.1
Q ss_pred HhccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc--ccchHHHHHHHHHHHhcCCCCcceEEeeeeccc-cCCC
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ--KGGSKSFAAECEALRSIRHRNLIKIVTICSSID-FKGV 775 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~ 775 (1009)
..++|.+.+.||+|+||.||+|.+..+|+.||||++.... ......+.+|+.+++.++||||+++++++.... ....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 3578999999999999999999998899999999986432 223457789999999999999999999875432 1223
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
...++||||+++ ++.+.+.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~--------~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~D 166 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 166 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc--------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEec
Confidence 457999999964 67666643 278888999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCccc
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESM 923 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~ 923 (1009)
||+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 167 fg~a~~~~~~---------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 167 FGLARTACTN---------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred CCCccccccC---------ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 9999754321 1122356899999999999999999999999999999999999999743
No 132
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=3.8e-35 Score=326.75 Aligned_cols=242 Identities=22% Similarity=0.275 Sum_probs=191.5
Q ss_pred CcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCCCceEEEEE
Q 047768 707 NTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKGVDFKALVY 782 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 782 (1009)
+.||+|+||.||+|+++.+++.||||+++... ......+..|.+++..+ +||||+++++++.. ....++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~-----~~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQT-----KDRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-----CCeEEEEE
Confidence 46999999999999999889999999997542 22335577888888876 79999999998654 36789999
Q ss_pred eccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccccc
Q 047768 783 EYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 862 (1009)
Q Consensus 783 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~ 862 (1009)
||+++|+|.+++..... +++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 E~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~ 146 (321)
T cd05591 76 EYVNGGDLMFQIQRSRK------FDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEG 146 (321)
T ss_pred eCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceec
Confidence 99999999999876542 88999999999999999999999 9999999999999999999999999998754
Q ss_pred CCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchh
Q 047768 863 SASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKV 942 (1009)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 942 (1009)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ...........
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~-----~~~~~~i~~~~- 212 (321)
T cd05591 147 ILNG--------VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE-----DDLFESILHDD- 212 (321)
T ss_pred ccCC--------ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH-----HHHHHHHHcCC-
Confidence 3211 122345689999999999999999999999999999999999999974321 11111111110
Q ss_pred hhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCC-------CHHHHHH
Q 047768 943 MEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRM-------EMTDVVV 995 (1009)
Q Consensus 943 ~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rp-------t~~evl~ 995 (1009)
.. .+ .....++.+++.+|++.||++|| +++++++
T Consensus 213 -------~~-~p-----------~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 213 -------VL-YP-----------VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred -------CC-CC-----------CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 00 00 01123567999999999999999 6777764
No 133
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=8.3e-35 Score=317.01 Aligned_cols=248 Identities=23% Similarity=0.288 Sum_probs=192.5
Q ss_pred ccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEecc
Q 047768 709 IGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYEYM 785 (1009)
Q Consensus 709 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 785 (1009)
||+|+||+||+++.+.+|+.||+|++..... ...+.+..|++++++++||||+++++++.. ....++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~-----~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFES-----KTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEec-----CCeEEEEEecC
Confidence 6999999999999998999999999864321 123456679999999999999999988643 36789999999
Q ss_pred CCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccCCC
Q 047768 786 QNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSAS 865 (1009)
Q Consensus 786 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 865 (1009)
++++|.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 76 ~g~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~ 148 (277)
T cd05607 76 NGGDLKYHIYNVGE----RGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG 148 (277)
T ss_pred CCCCHHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCC
Confidence 99999988865432 2388999999999999999999999 9999999999999999999999999999765432
Q ss_pred CCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchhhhc
Q 047768 866 PLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKVMEI 945 (1009)
Q Consensus 866 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 945 (1009)
. ......|+..|+|||++.+..++.++||||+||++|||++|+.||...... .............
T Consensus 149 ~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~-~~~~~~~~~~~~~----- 213 (277)
T cd05607 149 K---------TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK-VAKEELKRRTLED----- 213 (277)
T ss_pred c---------eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch-hhHHHHHHHhhcc-----
Confidence 1 112346899999999999999999999999999999999999998643221 1111111111111
Q ss_pred cCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 047768 946 VDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKL 997 (1009)
Q Consensus 946 ~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L 997 (1009)
..... ......++.+++.+|++.||++||++.|+++..
T Consensus 214 ---~~~~~-----------~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 214 ---EVKFE-----------HQNFTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred ---ccccc-----------cccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 00000 001233578999999999999999998776443
No 134
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=4.6e-35 Score=331.14 Aligned_cols=203 Identities=21% Similarity=0.312 Sum_probs=173.7
Q ss_pred HHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCC
Q 047768 698 KATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKG 774 (1009)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 774 (1009)
...++|++.+.||+|+||.||+|+++.+++.||+|+++... ....+.+.+|+++++.++||||+++++++..
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~----- 114 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQD----- 114 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----
Confidence 34578999999999999999999999899999999986422 2234568899999999999999999998654
Q ss_pred CceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEe
Q 047768 775 VDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 854 (1009)
Q Consensus 775 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~ 854 (1009)
....++||||+++|+|.+++.... +++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~l~~~~-------~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~ 184 (370)
T cd05621 115 DKYLYMVMEYMPGGDLVNLMSNYD-------VPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLA 184 (370)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEE
Confidence 378899999999999999997543 78889999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCCCCccccCCccccccccccccCccccCCC----CCCCcccchHHHHHHHHHHhCCCCCcc
Q 047768 855 DFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG----EASMRGGVYSYGILLLEIFTRRRPTES 922 (1009)
Q Consensus 855 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwS~Gvvl~elltg~~p~~~ 922 (1009)
|||+|+....... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 185 DFG~a~~~~~~~~-------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~ 249 (370)
T cd05621 185 DFGTCMKMDETGM-------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYA 249 (370)
T ss_pred ecccceecccCCc-------eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCC
Confidence 9999987643211 112245799999999998764 378899999999999999999999974
No 135
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=3.9e-35 Score=327.14 Aligned_cols=242 Identities=20% Similarity=0.273 Sum_probs=190.6
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhcCCC-CcceEEeeeeccccCCCce
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSIRHR-NLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~~~~ 777 (1009)
+|++.+.||+|+||.||+|+++.+++.||||+++... ....+.+..|+++++.++|+ +|+++++++.. .+.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-----~~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT-----MDR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEc-----CCE
Confidence 4788899999999999999999889999999997542 22345678899999999765 57778777543 367
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++||||+++|+|.+++..... +++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~~------~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQVGK------FKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFG 146 (324)
T ss_pred EEEEEcCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecC
Confidence 8999999999999999976542 88999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
+++...... .......||+.|+|||++.+..++.++||||+||++|||+||+.||..... .......
T Consensus 147 ~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~-----~~~~~~i 213 (324)
T cd05587 147 MCKENIFGG--------KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE-----DELFQSI 213 (324)
T ss_pred cceecCCCC--------CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-----HHHHHHH
Confidence 987432111 122245689999999999999999999999999999999999999964321 1111111
Q ss_pred ccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCH
Q 047768 938 LPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEM 990 (1009)
Q Consensus 938 ~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~ 990 (1009)
..... ..+ .....++.+++.+|++.||.+|++.
T Consensus 214 --------~~~~~-~~~-----------~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 214 --------MEHNV-SYP-----------KSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred --------HcCCC-CCC-----------CCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 00000 000 0112356789999999999999986
No 136
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.1e-34 Score=313.58 Aligned_cols=255 Identities=27% Similarity=0.442 Sum_probs=201.0
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
.++|.+.++||+|+||+||+|++.. ...||+|+++... ...+.+.+|++++++++||||+++++++.. ...+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~-~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~------~~~~ 76 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIY 76 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecC-CceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECC------CCcE
Confidence 3568999999999999999998864 4569999986432 234678999999999999999999987532 4568
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||.+
T Consensus 77 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~ 149 (262)
T cd05071 77 IVTEYMSKGSLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLA 149 (262)
T ss_pred EEEEcCCCCcHHHHHhhccc----cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCce
Confidence 99999999999999976432 2378999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
+....... .......++..|+|||+..+..++.++||||||+++|||+| |+.||...... ......
T Consensus 150 ~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~-----~~~~~~- 216 (262)
T cd05071 150 RLIEDNEY-------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLDQV- 216 (262)
T ss_pred eecccccc-------ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH-----HHHHHH-
Confidence 86654321 11112346778999999998999999999999999999999 78888643211 111100
Q ss_pred cchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 047768 939 PEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHA 1000 (1009)
Q Consensus 939 ~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i 1000 (1009)
...... ....+++..+.+++.+|++.+|++||+++++.+.|+..
T Consensus 217 -------~~~~~~-----------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 217 -------ERGYRM-----------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred -------hcCCCC-----------CCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 000000 00113445688999999999999999999999998764
No 137
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=5.4e-35 Score=319.94 Aligned_cols=261 Identities=25% Similarity=0.418 Sum_probs=200.3
Q ss_pred ccCccCCcccccCCceEEEEEEe----cCCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCC
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLH----ENGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 775 (1009)
++|++.+.||+|+||.||+|.+. .++..||+|.++.... .....+.+|++++++++||||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----- 79 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQE----- 79 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecC-----
Confidence 46788899999999999999863 3567899999864332 2235788999999999999999999986543
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCC-----------CCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCcee
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQ-----------LGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVL 844 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nil 844 (1009)
...++||||+++++|.+++...... .....+++.+...++.|++.|++|||++ +|+||||||+||+
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nil 156 (283)
T cd05090 80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNIL 156 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEE
Confidence 6689999999999999998643211 0112478899999999999999999999 9999999999999
Q ss_pred eCCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCccc
Q 047768 845 LDHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESM 923 (1009)
Q Consensus 845 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~ 923 (1009)
+++++.+|++|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||...
T Consensus 157 i~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~ 230 (283)
T cd05090 157 IGEQLHVKISDLGLSREIYSADYY------RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGF 230 (283)
T ss_pred EcCCCcEEeccccccccccCCcce------ecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCC
Confidence 999999999999999876432210 11122345778999999998899999999999999999999 88898643
Q ss_pred ccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 047768 924 FNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCH 999 (1009)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~ 999 (1009)
.. ........... .... ...++.++.+++.+|++.||++||++.++.+.|.+
T Consensus 231 ~~-----~~~~~~~~~~~--------~~~~-----------~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 231 SN-----QEVIEMVRKRQ--------LLPC-----------SEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred CH-----HHHHHHHHcCC--------cCCC-----------CCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 21 11111110000 0000 01233467889999999999999999999988753
No 138
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=6.3e-35 Score=347.44 Aligned_cols=272 Identities=22% Similarity=0.269 Sum_probs=204.7
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc---chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG---GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
++|.+.++||+|+||.||+|.+..+++.||||+++..... ..+.+.+|++++++++||||+++++++... +.
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~-----~~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDG-----DP 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeC-----CE
Confidence 5789999999999999999999989999999998643222 245788999999999999999999987643 67
Q ss_pred EEEEEeccCCCCHHHHHhccCCC-----CCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceE
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQ-----LGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 852 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~-----~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~k 852 (1009)
.++||||+++|+|.+++...... .....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vK 153 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVV 153 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEE
Confidence 89999999999999998753211 0112367788899999999999999999 999999999999999999999
Q ss_pred EeccccccccCCCCCCCc----------cccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcc
Q 047768 853 VSDFGLAKFLSASPLGNV----------VETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTES 922 (1009)
Q Consensus 853 l~DfGla~~~~~~~~~~~----------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~ 922 (1009)
|+|||+++.......... ...........||+.|||||++.+..++.++|||||||++|||+||+.||..
T Consensus 154 LiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~ 233 (932)
T PRK13184 154 ILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRR 233 (932)
T ss_pred EEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 999999987632110000 0000111235699999999999999999999999999999999999999964
Q ss_pred cccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHHH
Q 047768 923 MFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRM-EMTDVVVKLCHAR 1001 (1009)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rp-t~~evl~~L~~i~ 1001 (1009)
........ .. ... .+... ....+.+..+.+++.+|++.||++|| +++++.+.|+...
T Consensus 234 ~~~~ki~~----~~-------~i~------~P~~~-----~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~l 291 (932)
T PRK13184 234 KKGRKISY----RD-------VIL------SPIEV-----APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHL 291 (932)
T ss_pred cchhhhhh----hh-------hcc------Chhhc-----cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 21110000 00 000 00000 00012334678999999999999996 6777777777654
Q ss_pred H
Q 047768 1002 Q 1002 (1009)
Q Consensus 1002 ~ 1002 (1009)
+
T Consensus 292 q 292 (932)
T PRK13184 292 Q 292 (932)
T ss_pred h
Confidence 4
No 139
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=7.3e-35 Score=313.83 Aligned_cols=251 Identities=29% Similarity=0.451 Sum_probs=198.2
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
.+|++.+.||+|+||.||+|.++ ++..+|+|++.... .....+.+|++++++++||||+++++++... ...++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~l 76 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQ-----RPIFI 76 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCC-----CceEE
Confidence 45788899999999999999886 56789999985332 2345788999999999999999999986543 57899
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
|+||+++++|.+++..... .+++..+..++.|++.|++|||+. +|+||||||+||++++++.+|++|||+++
T Consensus 77 v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~ 148 (256)
T cd05059 77 VTEYMANGCLLNYLRERKG-----KLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLAR 148 (256)
T ss_pred EEecCCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccce
Confidence 9999999999999986543 389999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhcc
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
....... ....+..++..|+|||...+..++.++||||||+++|||++ |+.||...... +.....
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~-- 214 (256)
T cd05059 149 YVLDDQY-------TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS-----EVVESV-- 214 (256)
T ss_pred ecccccc-------cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH-----HHHHHH--
Confidence 6543211 11112234568999999999999999999999999999999 88998643211 111110
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKL 997 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L 997 (1009)
.. .... ..+..++.++.+++.+|++.+|++|||+.|+++.|
T Consensus 215 ---~~----~~~~----------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 215 ---SA----GYRL----------YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred ---Hc----CCcC----------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 00 0000 00112345688999999999999999999999876
No 140
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1e-34 Score=316.80 Aligned_cols=248 Identities=26% Similarity=0.332 Sum_probs=192.1
Q ss_pred ccccCCceEEEEEEecCCeEEEEEEeeccccc---chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEecc
Q 047768 709 IGRGSFGFVYKGVLHENGMLVAVKVINLEQKG---GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYEYM 785 (1009)
Q Consensus 709 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 785 (1009)
||+|+||+||+|.++.+++.||||++...... ..+.+..|++++++++|+||+++.+++.. ....++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-----~~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQT-----KTDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcC-----CCeEEEEEeCC
Confidence 69999999999999989999999998643221 23467789999999999999999887543 36789999999
Q ss_pred CCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccCCC
Q 047768 786 QNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSAS 865 (1009)
Q Consensus 786 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 865 (1009)
++|+|.+++...... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 76 ~~g~L~~~~~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 150 (280)
T cd05608 76 NGGDLRYHIYNVDEE--NPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDG 150 (280)
T ss_pred CCCCHHHHHHhcccc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCC
Confidence 999999887543211 12489999999999999999999999 9999999999999999999999999999765432
Q ss_pred CCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchhhhc
Q 047768 866 PLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKVMEI 945 (1009)
Q Consensus 866 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 945 (1009)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..........
T Consensus 151 ~--------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~------- 214 (280)
T cd05608 151 Q--------SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRIL------- 214 (280)
T ss_pred C--------ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-hHHHHHHhhc-------
Confidence 1 11223568999999999999999999999999999999999999997432110 1111111110
Q ss_pred cCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 047768 946 VDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRM-----EMTDVVV 995 (1009)
Q Consensus 946 ~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rp-----t~~evl~ 995 (1009)
.... . ........+.+++.+|++.||++|| +++|+++
T Consensus 215 -~~~~-~-----------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 215 -NDSV-T-----------YPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred -ccCC-C-----------CcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 0000 0 0112334578999999999999999 6677765
No 141
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.6e-34 Score=311.37 Aligned_cols=251 Identities=23% Similarity=0.329 Sum_probs=202.1
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc--ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ--KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
+|++.+.||+|++|.||+|.++.+++.||+|.+.... ....+.+.+|++++++++|||++++++++... ...+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDK-----GKLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccC-----CEEE
Confidence 4777899999999999999999899999999986432 23356788999999999999999999986543 6789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+||||+++++|.+++..... ..+++.+++.++.+++.|+.|||+. +++||||||+||+++.++.+|++|||++
T Consensus 76 lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~ 148 (256)
T cd08529 76 IVMEYAENGDLHKLLKMQRG----RPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVA 148 (256)
T ss_pred EEEEeCCCCcHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccc
Confidence 99999999999999987532 2488999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhcc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
+...... .......|++.|+|||+..+..++.++|||||||++|||++|+.||..... .......
T Consensus 149 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~-- 213 (256)
T cd08529 149 KLLSDNT--------NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ-----GALILKI-- 213 (256)
T ss_pred eeccCcc--------chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHH--
Confidence 8665421 111234578899999999999999999999999999999999999974321 1111111
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
........ .......+.+++.+||+.+|++||++.|+++.
T Consensus 214 ------~~~~~~~~-----------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 214 ------IRGVFPPV-----------SQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred ------HcCCCCCC-----------ccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 11000000 01233468899999999999999999999863
No 142
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=8.7e-35 Score=313.50 Aligned_cols=251 Identities=27% Similarity=0.436 Sum_probs=197.7
Q ss_pred CcccccCCceEEEEEEecCC---eEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEE
Q 047768 707 NTIGRGSFGFVYKGVLHENG---MLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVY 782 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 782 (1009)
++||+|+||.||+|.+...+ ..||+|.++.... ...+.+.+|++++++++|+|++++++++.. ...++||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG------EPLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC------CceEEEE
Confidence 46999999999999886544 7899999864433 234678899999999999999999998642 4578999
Q ss_pred eccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccccc
Q 047768 783 EYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 862 (1009)
Q Consensus 783 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~ 862 (1009)
||+++|+|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++..
T Consensus 75 e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~ 145 (257)
T cd05060 75 ELAPLGPLLKYLKKRR------EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRAL 145 (257)
T ss_pred EeCCCCcHHHHHHhCC------CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEecccccccee
Confidence 9999999999998755 388999999999999999999998 9999999999999999999999999999866
Q ss_pred CCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhccch
Q 047768 863 SASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRALPEK 941 (1009)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 941 (1009)
...... ........++..|+|||...+..++.++|||||||++|||++ |+.||...... ..........+
T Consensus 146 ~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~--~~~~~~~~~~~-- 216 (257)
T cd05060 146 GAGSDY-----YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA--EVIAMLESGER-- 216 (257)
T ss_pred ecCCcc-----cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHcCCc--
Confidence 432210 011112234578999999999999999999999999999998 99998643211 11111111000
Q ss_pred hhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 047768 942 VMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHAR 1001 (1009)
Q Consensus 942 ~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~ 1001 (1009)
.. ....+...+.+++.+|+..+|++||++.++++.|+++.
T Consensus 217 ---------~~-----------~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 217 ---------LP-----------RPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred ---------CC-----------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 00 01123356889999999999999999999999998764
No 143
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=9.8e-35 Score=319.63 Aligned_cols=252 Identities=21% Similarity=0.287 Sum_probs=202.1
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
..+|++.+.||+|+||.||+|.+..+++.||+|.+........+.+.+|+.+++.++|+|++++++++... ...+
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~-----~~~~ 93 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG-----DELW 93 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeC-----CEEE
Confidence 35788899999999999999999888999999999766555567888999999999999999999987543 6789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+||||+++++|.+++.+.. +++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 94 lv~e~~~~~~L~~~~~~~~-------~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~ 163 (296)
T cd06654 94 VVMEYLAGGSLTDVVTETC-------MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 163 (296)
T ss_pred EeecccCCCCHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccc
Confidence 9999999999999986532 78899999999999999999999 9999999999999999999999999998
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhcc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
....... .......|++.|+|||.+.+..++.++|||||||++|||++|+.||...... ..+.... .
T Consensus 164 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~----~~~~~~~-~ 230 (296)
T cd06654 164 AQITPEQ--------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL----RALYLIA-T 230 (296)
T ss_pred hhccccc--------cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH----HhHHHHh-c
Confidence 7654321 1112345889999999999888999999999999999999999999643211 1110000 0
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
.. .+.+ .. .......+.+++.+|+..+|++||++.|+++.
T Consensus 231 ~~-----~~~~-~~-----------~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 231 NG-----TPEL-QN-----------PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred CC-----CCCC-CC-----------ccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 00 0000 00 01223457789999999999999999999873
No 144
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=8.9e-35 Score=319.40 Aligned_cols=263 Identities=22% Similarity=0.327 Sum_probs=202.2
Q ss_pred cCccCCcccccCCceEEEEEEec-----CCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCC
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHE-----NGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 775 (1009)
+|++.+.||+|+||.||+|.... ....||+|.+..... .....+.+|+.++++++||||+++++.+...
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 75 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQD----- 75 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecC-----
Confidence 46788999999999999998752 235789998864432 2235788999999999999999999987543
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCC------------------CCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecC
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQ------------------LGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGD 837 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~------------------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrd 837 (1009)
...++|+||+.+|+|.+++...... .....+++.+++.++.|++.|++|||+. +|+|||
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~d 152 (290)
T cd05045 76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRD 152 (290)
T ss_pred CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhh
Confidence 5679999999999999998753211 0113488999999999999999999998 999999
Q ss_pred CCCCceeeCCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-C
Q 047768 838 LKPSNVLLDHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-R 916 (1009)
Q Consensus 838 lk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g 916 (1009)
|||+||++++++.+||+|||+++........ .......++..|+|||++.+..++.++||||||+++|||++ |
T Consensus 153 ikp~nill~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g 226 (290)
T cd05045 153 LAARNVLVAEGRKMKISDFGLSRDVYEEDSY------VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 226 (290)
T ss_pred hhhheEEEcCCCcEEeccccccccccCccch------hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999865432110 01122345678999999998999999999999999999999 9
Q ss_pred CCCCcccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 917 RRPTESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 917 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
+.||.... ..+.. +.+....... ....+..++.+++.+|++.+|++||+++|+++.
T Consensus 227 ~~p~~~~~-----~~~~~---------~~~~~~~~~~----------~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~ 282 (290)
T cd05045 227 GNPYPGIA-----PERLF---------NLLKTGYRME----------RPENCSEEMYNLMLTCWKQEPDKRPTFADISKE 282 (290)
T ss_pred CCCCCCCC-----HHHHH---------HHHhCCCCCC----------CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 99986432 11111 1111111110 011233468899999999999999999999999
Q ss_pred HHHHHH
Q 047768 997 LCHARQ 1002 (1009)
Q Consensus 997 L~~i~~ 1002 (1009)
|+++..
T Consensus 283 l~~~~~ 288 (290)
T cd05045 283 LEKMMV 288 (290)
T ss_pred HHHHHh
Confidence 998754
No 145
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=8.9e-35 Score=313.37 Aligned_cols=249 Identities=24% Similarity=0.366 Sum_probs=194.8
Q ss_pred cccccCCceEEEEEEe--cCCeEEEEEEeeccccc--chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEe
Q 047768 708 TIGRGSFGFVYKGVLH--ENGMLVAVKVINLEQKG--GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYE 783 (1009)
Q Consensus 708 ~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 783 (1009)
.||+|+||.||+|.++ .++..||+|+++..... ..+.+.+|+.+++.++||||+++++++.. +..++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA------ESWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC------CCcEEEEe
Confidence 5899999999999764 56789999998644322 24578899999999999999999998643 45689999
Q ss_pred ccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccC
Q 047768 784 YMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLS 863 (1009)
Q Consensus 784 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~ 863 (1009)
|+++|+|.+++.... .+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 ~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~ 146 (257)
T cd05116 76 LAELGPLNKFLQKNK------HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALG 146 (257)
T ss_pred cCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccC
Confidence 999999999997654 388999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhccchh
Q 047768 864 ASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRALPEKV 942 (1009)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 942 (1009)
...... .......++..|+|||.+....++.++|||||||++|||++ |+.||..... ..+...
T Consensus 147 ~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----~~~~~~------ 210 (257)
T cd05116 147 ADENYY-----KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG-----NEVTQM------ 210 (257)
T ss_pred CCCCee-----eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHH------
Confidence 332100 11112334678999999988889999999999999999998 9999874321 111111
Q ss_pred hhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 047768 943 MEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHA 1000 (1009)
Q Consensus 943 ~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i 1000 (1009)
+....... .+..+..++.+++.+||+.||++||++++|++.|+..
T Consensus 211 ---i~~~~~~~----------~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 211 ---IESGERME----------CPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred ---HHCCCCCC----------CCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 11100000 0112345678999999999999999999999998753
No 146
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=5.8e-35 Score=321.49 Aligned_cols=265 Identities=24% Similarity=0.375 Sum_probs=204.6
Q ss_pred HhccCccCCcccccCCceEEEEEEecC-----CeEEEEEEeecccc-cchHHHHHHHHHHHhc-CCCCcceEEeeeeccc
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLHEN-----GMLVAVKVINLEQK-GGSKSFAAECEALRSI-RHRNLIKIVTICSSID 771 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 771 (1009)
..++|++.+.||+|+||.||+|.++.. ...||+|+++.... .....+.+|+++++++ +|+||+++++++...
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~- 88 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE- 88 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC-
Confidence 446788899999999999999998643 37899999864322 2235688999999999 899999999987543
Q ss_pred cCCCceEEEEEeccCCCCHHHHHhccCCC----------CCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCC
Q 047768 772 FKGVDFKALVYEYMQNGSLEEWLHQRDDQ----------LGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPS 841 (1009)
Q Consensus 772 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~ 841 (1009)
...+++|||+++|+|.++++.+... .....+++..++.++.|++.|++|||+. +|+||||||+
T Consensus 89 ----~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~ 161 (293)
T cd05053 89 ----GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAAR 161 (293)
T ss_pred ----CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Ccccccccee
Confidence 5689999999999999999764311 1123588999999999999999999998 9999999999
Q ss_pred ceeeCCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCC
Q 047768 842 NVLLDHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPT 920 (1009)
Q Consensus 842 Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~ 920 (1009)
||+++.++.+|++|||+++........ .......++..|+|||++.+..++.++|||||||++||+++ |..||
T Consensus 162 Nil~~~~~~~kL~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~ 235 (293)
T cd05053 162 NVLVTEDHVMKIADFGLARDIHHIDYY------RKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPY 235 (293)
T ss_pred eEEEcCCCeEEeCccccccccccccce------eccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCC
Confidence 999999999999999999876543211 11112335678999999999999999999999999999998 99998
Q ss_pred cccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 047768 921 ESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHA 1000 (1009)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i 1000 (1009)
.... ..+.... +...... .....+...+.+++.+|++.+|++||||.|+++.|+.+
T Consensus 236 ~~~~-----~~~~~~~---------~~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 236 PGIP-----VEELFKL---------LKEGYRM----------EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred CCCC-----HHHHHHH---------HHcCCcC----------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 6432 1111111 0000000 00112344688999999999999999999999999876
Q ss_pred H
Q 047768 1001 R 1001 (1009)
Q Consensus 1001 ~ 1001 (1009)
.
T Consensus 292 ~ 292 (293)
T cd05053 292 L 292 (293)
T ss_pred h
Confidence 4
No 147
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=6.4e-35 Score=323.65 Aligned_cols=241 Identities=23% Similarity=0.331 Sum_probs=189.6
Q ss_pred CcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCCCceEEEEE
Q 047768 707 NTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKGVDFKALVY 782 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 782 (1009)
+.||+|+||+||+|++..+++.||||+++... ......+..|..++... +||||+++++++.. .+..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~-----~~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQT-----KENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEe-----CCEEEEEE
Confidence 46999999999999999889999999997542 22345566788888764 89999999998654 36789999
Q ss_pred eccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccccc
Q 047768 783 EYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 862 (1009)
Q Consensus 783 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~ 862 (1009)
||+++|+|.+++.... .+++.++..++.|++.|+.|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 ey~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05619 76 EYLNGGDLMFHIQSCH------KFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKEN 146 (316)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceEC
Confidence 9999999999997653 288999999999999999999999 9999999999999999999999999998753
Q ss_pred CCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchh
Q 047768 863 SASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKV 942 (1009)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 942 (1009)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .+......
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~-----~~~~~~i~---- 209 (316)
T cd05619 147 MLGD--------AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE-----EELFQSIR---- 209 (316)
T ss_pred CCCC--------CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH-----HHHHHHHH----
Confidence 2211 122345689999999999999999999999999999999999999964321 11111100
Q ss_pred hhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHH-HHH
Q 047768 943 MEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMT-DVV 994 (1009)
Q Consensus 943 ~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~-evl 994 (1009)
...+.. + .....++.+++.+|++.||++||++. ++.
T Consensus 210 --~~~~~~---~-----------~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 210 --MDNPCY---P-----------RWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred --hCCCCC---C-----------ccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 000000 0 01123467899999999999999997 554
No 148
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=9.5e-35 Score=329.97 Aligned_cols=268 Identities=22% Similarity=0.322 Sum_probs=204.5
Q ss_pred HHHhccCccCCcccccCCceEEEEEEe-----cCCeEEEEEEeeccccc-chHHHHHHHHHHHhcC-CCCcceEEeeeec
Q 047768 697 SKATNEFSSSNTIGRGSFGFVYKGVLH-----ENGMLVAVKVINLEQKG-GSKSFAAECEALRSIR-HRNLIKIVTICSS 769 (1009)
Q Consensus 697 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-h~niv~l~~~~~~ 769 (1009)
....++|.+.+.||+|+||.||+|+++ ..++.||||+++..... ..+.+.+|++++.++. ||||++++++|..
T Consensus 33 ~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~ 112 (401)
T cd05107 33 EMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTK 112 (401)
T ss_pred eecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc
Confidence 344567888999999999999999974 24568999999754322 2346889999999997 9999999999765
Q ss_pred cccCCCceEEEEEeccCCCCHHHHHhccCCC-------------------------------------------------
Q 047768 770 IDFKGVDFKALVYEYMQNGSLEEWLHQRDDQ------------------------------------------------- 800 (1009)
Q Consensus 770 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------------------- 800 (1009)
. ...++|+||+++|+|.++++.....
T Consensus 113 ~-----~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (401)
T cd05107 113 G-----GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESA 187 (401)
T ss_pred C-----CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCcccc
Confidence 3 5689999999999999999754310
Q ss_pred -------------------------------------------CCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecC
Q 047768 801 -------------------------------------------LGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGD 837 (1009)
Q Consensus 801 -------------------------------------------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrd 837 (1009)
.....+++.++..++.|++.|++|||+. +|+|||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrd 264 (401)
T cd05107 188 DYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRD 264 (401)
T ss_pred CccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCccc
Confidence 0112477888999999999999999998 999999
Q ss_pred CCCCceeeCCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-C
Q 047768 838 LKPSNVLLDHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-R 916 (1009)
Q Consensus 838 lk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g 916 (1009)
|||+||++++++.+|++|||+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |
T Consensus 265 lkp~NiLl~~~~~~kL~DfGla~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g 338 (401)
T cd05107 265 LAARNVLICEGKLVKICDFGLARDIMRDSNY------ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLG 338 (401)
T ss_pred CCcceEEEeCCCEEEEEecCcceeccccccc------ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999865332110 11112356789999999999999999999999999999998 8
Q ss_pred CCCCcccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 917 RRPTESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 917 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
+.||....... ... ..+....... .+..+..++.+++.+||..+|.+||+++|+++.
T Consensus 339 ~~P~~~~~~~~----~~~---------~~~~~~~~~~----------~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 339 GTPYPELPMNE----QFY---------NAIKRGYRMA----------KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred CCCCCCCCchH----HHH---------HHHHcCCCCC----------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 89986432111 110 0000000000 001223568899999999999999999999999
Q ss_pred HHHHH
Q 047768 997 LCHAR 1001 (1009)
Q Consensus 997 L~~i~ 1001 (1009)
|+.+.
T Consensus 396 L~~~~ 400 (401)
T cd05107 396 VGDLL 400 (401)
T ss_pred HHHHh
Confidence 98764
No 149
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=6.8e-35 Score=316.34 Aligned_cols=253 Identities=23% Similarity=0.301 Sum_probs=199.3
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
++|.+.+.||+|+||.||+|++..+++.||+|+++.........+.+|+.+++.++||||+++++++... +..++
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~-----~~~~l 83 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRR-----DKLWI 83 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeC-----CEEEE
Confidence 4788889999999999999999889999999998765544456788999999999999999999986543 67899
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
|+||+++++|.+++.... .+++.++..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 84 v~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~ 154 (267)
T cd06645 84 CMEFCGGGSLQDIYHVTG------PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSA 154 (267)
T ss_pred EEeccCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeee
Confidence 999999999999987654 389999999999999999999999 99999999999999999999999999987
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccC---CCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGL---GGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
...... .......|+..|+|||++. ...++.++||||+||++|||++|+.||....... .......
T Consensus 155 ~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~-~~~~~~~-- 223 (267)
T cd06645 155 QITATI--------AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR-ALFLMTK-- 223 (267)
T ss_pred EccCcc--------cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh-hHHhhhc--
Confidence 654321 1122356899999999874 4568899999999999999999999986432110 0000000
Q ss_pred ccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 938 LPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 938 ~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
. ....+... ....+...+.+++.+|++.+|++||+++++++
T Consensus 224 --~---~~~~~~~~------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 224 --S---NFQPPKLK------------DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred --c---CCCCCccc------------ccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 0 00000000 00012345779999999999999999999875
No 150
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.2e-34 Score=314.30 Aligned_cols=262 Identities=23% Similarity=0.328 Sum_probs=206.0
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
++|++.+.||+|+||.||+|+.+.+++.||||.+..... .....+.+|+++++.++||||+++++++.. ...
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-----DNE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEe-----CCe
Confidence 468888999999999999999988999999998864322 223578899999999999999999998654 367
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.+++|||+++++|.+++...... ...+++..++.++.|++.|++|||+. +++|+||||+||+++.++.++++|||
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg 151 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFKKQ--KRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcch
Confidence 89999999999999998753221 12488999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
++....... .......|+..|+|||++.+..++.++||||||+++|||++|..||.....+ .......
T Consensus 152 ~~~~~~~~~--------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~- 219 (267)
T cd08229 152 LGRFFSSKT--------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLCKK- 219 (267)
T ss_pred hhhccccCC--------cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch---HHHHhhh-
Confidence 987654321 1112346889999999999989999999999999999999999998632211 1111110
Q ss_pred ccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 047768 938 LPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHAR 1001 (1009)
Q Consensus 938 ~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~ 1001 (1009)
+... ...+. .......++.+++.+||+.+|.+||||.+|++.+++..
T Consensus 220 ----~~~~---~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 220 ----IEQC---DYPPL----------PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred ----hhcC---CCCCC----------CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 0000 00000 01123456889999999999999999999999998764
No 151
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=3.1e-35 Score=329.18 Aligned_cols=253 Identities=22% Similarity=0.269 Sum_probs=198.4
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
++|.+.+.||+|+||+||+|+.+.+++.||||+++.... ...+.+.+|+.+++.++|+||+++++++.. ...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~-----~~~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQD-----KDN 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEec-----CCe
Confidence 468889999999999999999999999999999975432 234568899999999999999999988654 367
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++||||+++|+|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg 147 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNRYED-----QFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFG 147 (330)
T ss_pred EEEEECCCCCCCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCC
Confidence 8999999999999999987643 389999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccC------CCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHH
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGL------GGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLH 931 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~ 931 (1009)
+++....... .......||+.|+|||++. ...++.++|||||||++|||++|+.||..... .
T Consensus 148 ~a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-----~ 215 (330)
T cd05601 148 SAARLTANKM-------VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS-----A 215 (330)
T ss_pred CCeECCCCCc-------eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH-----H
Confidence 9987643211 1122346899999999986 45678999999999999999999999964321 1
Q ss_pred HHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 932 EFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 932 ~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
......... .. ....+. .......+.+++..|++ +|++||++.+++.
T Consensus 216 ~~~~~i~~~------~~-~~~~~~---------~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 216 KTYNNIMNF------QR-FLKFPE---------DPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred HHHHHHHcC------CC-ccCCCC---------CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 111111100 00 000010 00122456788889998 9999999999874
No 152
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=6.9e-35 Score=323.56 Aligned_cols=241 Identities=22% Similarity=0.303 Sum_probs=189.2
Q ss_pred CcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCCCceEEEEE
Q 047768 707 NTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKGVDFKALVY 782 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 782 (1009)
+.||+|+||.||+|+++.+|+.||||+++... .........|.+++... +||||+++++++.. ....++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-----~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQT-----KEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEe-----CCEEEEEE
Confidence 46999999999999999999999999997542 22344567788888765 89999999998654 36889999
Q ss_pred eccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccccc
Q 047768 783 EYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 862 (1009)
Q Consensus 783 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~ 862 (1009)
||+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 E~~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05620 76 EFLNGGDLMFHIQDKG------RFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKEN 146 (316)
T ss_pred CCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeec
Confidence 9999999999987654 288999999999999999999999 9999999999999999999999999998743
Q ss_pred CCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchh
Q 047768 863 SASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKV 942 (1009)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 942 (1009)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .+....... .
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~-----~~~~~~~~~-~- 211 (316)
T cd05620 147 VFGD--------NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE-----DELFESIRV-D- 211 (316)
T ss_pred ccCC--------CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-----HHHHHHHHh-C-
Confidence 2211 122345689999999999999999999999999999999999999964321 111111100 0
Q ss_pred hhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHH-HHH
Q 047768 943 MEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMT-DVV 994 (1009)
Q Consensus 943 ~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~-evl 994 (1009)
.+.. + . ....++.+++.+|++.||++||++. ++.
T Consensus 212 ----~~~~---~-------~----~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 212 ----TPHY---P-------R----WITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred ----CCCC---C-------C----CCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 0000 0 0 1123467899999999999999985 554
No 153
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=6.4e-35 Score=332.58 Aligned_cols=208 Identities=23% Similarity=0.312 Sum_probs=173.0
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
++|.+.+.||+|+||+||+|..+.+++.||||++.... ....+.+.+|++++++++||||+++++++.. ...
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~-----~~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQD-----AQY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEc-----CCe
Confidence 36888999999999999999999999999999986432 2223567889999999999999999998654 468
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfG 146 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLIKYD------TFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFG 146 (377)
T ss_pred eEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecc
Confidence 899999999999999997654 388899999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCc---------ccc------------------------------CCccccccccccccCccccCCCCCC
Q 047768 858 LAKFLSASPLGNV---------VET------------------------------PSSSIGVKGTIGYVAPEYGLGGEAS 898 (1009)
Q Consensus 858 la~~~~~~~~~~~---------~~~------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~ 898 (1009)
+++.......... ... ........||+.|+|||++.+..++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 226 (377)
T cd05629 147 LSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYG 226 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCC
Confidence 9974322100000 000 0001124699999999999999999
Q ss_pred CcccchHHHHHHHHHHhCCCCCcc
Q 047768 899 MRGGVYSYGILLLEIFTRRRPTES 922 (1009)
Q Consensus 899 ~~~DvwS~Gvvl~elltg~~p~~~ 922 (1009)
.++|||||||++|||++|+.||..
T Consensus 227 ~~~DiwSlGvil~elltG~~Pf~~ 250 (377)
T cd05629 227 QECDWWSLGAIMFECLIGWPPFCS 250 (377)
T ss_pred CceeeEecchhhhhhhcCCCCCCC
Confidence 999999999999999999999964
No 154
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.9e-35 Score=331.36 Aligned_cols=276 Identities=18% Similarity=0.209 Sum_probs=201.1
Q ss_pred HhccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc--ccchHHHHHHHHHHHhcCCCCcceEEeeeeccc-cCCC
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ--KGGSKSFAAECEALRSIRHRNLIKIVTICSSID-FKGV 775 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~ 775 (1009)
..++|.+.+.||+|+||.||+|.+...++.||||++.... ....+.+.+|+.+++.++||||+++++++.... ....
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3568999999999999999999998899999999986432 223457788999999999999999999865432 2233
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
...++||||++ ++|.+++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~D 169 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 169 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHHh--------cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEe
Confidence 46799999996 578777753 278889999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 935 (1009)
||+++..... .......||..|+|||++.+..++.++|||||||++|||++|+.||....... .......
T Consensus 170 fG~a~~~~~~---------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~~~~~~~ 239 (364)
T cd07875 170 FGLARTAGTS---------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIE 239 (364)
T ss_pred CCCccccCCC---------CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH
Confidence 9999865432 11223568999999999999999999999999999999999999997432211 1111111
Q ss_pred Hhc--cchhhhccCCCCCChhhhhhhcc----------------ccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 936 RAL--PEKVMEIVDPSLLPLEEERTNSR----------------RVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 936 ~~~--~~~~~~~~d~~l~~~~~~r~~~~----------------~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
... ..+....+.+........++... .........++.+++.+|++.||.+|||+.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 240 QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred hcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000 00010111000000000000000 00001122457899999999999999999999864
No 155
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.3e-34 Score=321.06 Aligned_cols=272 Identities=21% Similarity=0.295 Sum_probs=198.5
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
++|.+.+.||+|+||.||+|+++.+++.||+|+++.... .....+.+|++++++++||||+++++++... ...+
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 80 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTD-----KSLT 80 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeC-----CeEE
Confidence 578899999999999999999998899999999875432 2345678899999999999999999987543 6789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+||||++ ++|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 81 lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 151 (309)
T cd07872 81 LVFEYLD-KDLKQYMDDCGN-----IMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLA 151 (309)
T ss_pred EEEeCCC-CCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccc
Confidence 9999997 489888876543 378899999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh-
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA- 937 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~- 937 (1009)
+...... .......+|+.|+|||++.+ ..++.++||||+||++|||+||+.||......+ .........
T Consensus 152 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-~~~~~~~~~~ 222 (309)
T cd07872 152 RAKSVPT--------KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED-ELHLIFRLLG 222 (309)
T ss_pred eecCCCc--------cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhC
Confidence 7543221 11123457899999998765 467999999999999999999999997532211 111111100
Q ss_pred --ccchhhhccCCCC---CChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 938 --LPEKVMEIVDPSL---LPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 938 --~~~~~~~~~d~~l---~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
..+....+.+..- ...+...+............++.+++.+|++.||.+|||+.|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 223 TPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred CCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0000111100000 000000000000000112345679999999999999999999986
No 156
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=5.1e-35 Score=333.43 Aligned_cols=209 Identities=22% Similarity=0.298 Sum_probs=173.8
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
++|++.+.||+|+||+||+|+.+.+++.||||++.... ......+.+|++++++++|+||+++++++.. .+.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-----~~~ 75 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQD-----KDN 75 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEc-----CCE
Confidence 36889999999999999999999899999999986432 2234568899999999999999999988654 478
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG 146 (376)
T cd05598 76 LYFVMDYIPGGDMMSLLIRLG------IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFG 146 (376)
T ss_pred EEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCC
Confidence 899999999999999997754 278888999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCc-----------------------------------cccCCccccccccccccCccccCCCCCCCccc
Q 047768 858 LAKFLSASPLGNV-----------------------------------VETPSSSIGVKGTIGYVAPEYGLGGEASMRGG 902 (1009)
Q Consensus 858 la~~~~~~~~~~~-----------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 902 (1009)
+|........... ...........||+.|||||++.+..++.++|
T Consensus 147 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 226 (376)
T cd05598 147 LCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCD 226 (376)
T ss_pred CCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCccee
Confidence 9854321000000 00001112357999999999999999999999
Q ss_pred chHHHHHHHHHHhCCCCCccc
Q 047768 903 VYSYGILLLEIFTRRRPTESM 923 (1009)
Q Consensus 903 vwS~Gvvl~elltg~~p~~~~ 923 (1009)
||||||++|||++|+.||...
T Consensus 227 iwSlGvilyell~G~~Pf~~~ 247 (376)
T cd05598 227 WWSVGVILYEMLVGQPPFLAD 247 (376)
T ss_pred eeeccceeeehhhCCCCCCCC
Confidence 999999999999999999743
No 157
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.5e-34 Score=311.96 Aligned_cols=262 Identities=23% Similarity=0.346 Sum_probs=207.2
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
++|++.+.||+|+||.||+|....+|+.||+|.++... ....+.+.+|++++++++|+|++++++++.. ...
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~-----~~~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIE-----NNE 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeec-----CCe
Confidence 57889999999999999999998899999999886432 2234678899999999999999999998654 367
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++||||+++|+|.+++...... ...+++.+++.++.++++|++|||+. +|+||||+|+||+++.++.++++|||
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~ 151 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHFKKQ--KRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred EEEEEecCCCCCHHHHHHHhccc--CCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccc
Confidence 89999999999999998753221 12488999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
+++...... .......++..|+|||.+.+..++.++|||||||++|||++|+.||.... ..........
T Consensus 152 ~~~~~~~~~--------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~ 220 (267)
T cd08224 152 LGRFFSSKT--------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSLCKKI 220 (267)
T ss_pred eeeeccCCC--------cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC---ccHHHHHhhh
Confidence 987654321 11123457889999999999899999999999999999999999985321 1111111110
Q ss_pred ccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 047768 938 LPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHAR 1001 (1009)
Q Consensus 938 ~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~ 1001 (1009)
. .....+.+ .......+.+++.+|+..+|++||++.+|++++++++
T Consensus 221 ~--------~~~~~~~~----------~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 221 E--------KCDYPPLP----------ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred h--------cCCCCCCC----------hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 0 00010111 1133446789999999999999999999999998875
No 158
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=9.4e-35 Score=316.17 Aligned_cols=258 Identities=22% Similarity=0.316 Sum_probs=201.5
Q ss_pred HhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCC-Cc
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKG-VD 776 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~-~~ 776 (1009)
+.+.|++.+.||+|+||.||+|.++.+++.||+|++.... .....+.+|+.+++++ +|+|++++++++......+ ..
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence 4567888999999999999999999899999999986543 3356788999999998 7999999999986542221 24
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
..++||||+++++|.+++..... ..+++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+||
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Df 155 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNTKG----NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDF 155 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccC
Confidence 68899999999999999986432 2488999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccC-----CCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHH
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGL-----GGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLH 931 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~ 931 (1009)
|+++...... .......|+..|+|||++. +..++.++|||||||++|||++|+.||...... .
T Consensus 156 g~~~~~~~~~--------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~----~ 223 (272)
T cd06637 156 GVSAQLDRTV--------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM----R 223 (272)
T ss_pred CCceeccccc--------ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH----H
Confidence 9998653321 1223356899999999876 346788999999999999999999998643211 1
Q ss_pred HHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 932 EFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 932 ~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.... ..... .... ....+..++.+++.+||..+|.+|||+.|+++
T Consensus 224 ~~~~-~~~~~-----~~~~-------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 224 ALFL-IPRNP-----APRL-------------KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred HHHH-HhcCC-----CCCC-------------CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 1100 00000 0000 01123346789999999999999999999975
No 159
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1e-34 Score=320.68 Aligned_cols=263 Identities=27% Similarity=0.406 Sum_probs=200.3
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeE--EEEEEeeccc-ccchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCCC
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGML--VAVKVINLEQ-KGGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~--vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~ 775 (1009)
.++|++.+.||+|+||.||+|.++.++.. +|+|.++... ....+.+.+|++++.++ +|+||+++++++.. .
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~-----~ 80 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-----R 80 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECC-----C
Confidence 35788889999999999999998777654 5777665322 22345788999999999 89999999998754 3
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCC----------CccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceee
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQL----------GICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLL 845 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill 845 (1009)
...++|+||+++|+|.++++...... ....+++.+++.++.|++.|++|||+. +|+||||||+||++
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili 157 (303)
T cd05088 81 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILV 157 (303)
T ss_pred CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEe
Confidence 67899999999999999997643210 112488999999999999999999998 99999999999999
Q ss_pred CCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccc
Q 047768 846 DHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMF 924 (1009)
Q Consensus 846 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~ 924 (1009)
++++.+||+|||+++..... .......++..|+|||++.+..++.++|||||||++|||+| |..||....
T Consensus 158 ~~~~~~kl~dfg~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 228 (303)
T cd05088 158 GENYVAKIADFGLSRGQEVY---------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 228 (303)
T ss_pred cCCCcEEeCccccCcccchh---------hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCC
Confidence 99999999999998643211 00111234678999999988889999999999999999998 999986432
Q ss_pred cCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 047768 925 NEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQN 1003 (1009)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~~ 1003 (1009)
. .+..... +.. ..... .......+.+++.+|++.+|++||+++++++.+..+.+.
T Consensus 229 ~-----~~~~~~~-~~~-------~~~~~-----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 229 C-----AELYEKL-PQG-------YRLEK-----------PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred h-----HHHHHHH-hcC-------CcCCC-----------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 1 1111110 000 00000 011234578999999999999999999999999876543
No 160
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.1e-34 Score=317.44 Aligned_cols=261 Identities=24% Similarity=0.371 Sum_probs=200.3
Q ss_pred ccCccCCcccccCCceEEEEEEec-----CCeEEEEEEeeccccc-chHHHHHHHHHHHhcCCCCcceEEeeeeccccCC
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHE-----NGMLVAVKVINLEQKG-GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKG 774 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 774 (1009)
.+|.+.+.||+|+||.||+|.+.. .+..||||+++..... ....+.+|+.++++++||||+++++++...
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~---- 80 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE---- 80 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC----
Confidence 356777899999999999998753 3578999999744332 235688999999999999999999987543
Q ss_pred CceEEEEEeccCCCCHHHHHhccCCC----------CCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCcee
Q 047768 775 VDFKALVYEYMQNGSLEEWLHQRDDQ----------LGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVL 844 (1009)
Q Consensus 775 ~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nil 844 (1009)
...++++||+.+++|.+++...... .....+++..+..++.|++.|++|+|++ +|+||||||+||+
T Consensus 81 -~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil 156 (283)
T cd05091 81 -QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVL 156 (283)
T ss_pred -CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheE
Confidence 5678999999999999998643211 0112478889999999999999999999 9999999999999
Q ss_pred eCCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCccc
Q 047768 845 LDHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESM 923 (1009)
Q Consensus 845 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~ 923 (1009)
+++++.+||+|||+++........ .......+++.|+|||++.++.++.++|||||||++|||++ |..||...
T Consensus 157 ~~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~ 230 (283)
T cd05091 157 VFDKLNVKISDLGLFREVYAADYY------KLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY 230 (283)
T ss_pred ecCCCceEecccccccccccchhe------eeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC
Confidence 999999999999998866432210 11122345789999999988899999999999999999998 78887642
Q ss_pred ccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 047768 924 FNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCH 999 (1009)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~ 999 (1009)
. ...+........ ... ....++..+.+++.+|++.+|++||++.|+++.|+.
T Consensus 231 ~-----~~~~~~~i~~~~--------~~~-----------~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 231 S-----NQDVIEMIRNRQ--------VLP-----------CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred C-----HHHHHHHHHcCC--------cCC-----------CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 2 112211111111 000 011344568899999999999999999999998863
No 161
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.5e-34 Score=312.19 Aligned_cols=254 Identities=26% Similarity=0.473 Sum_probs=200.0
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
.++|++.+.||+|+||.||+|.+. ++..||+|.++.... ..+.+.+|+.++++++|+|++++++++.. ...+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~------~~~~ 76 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSE------EPIY 76 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECC------CCcE
Confidence 357888999999999999999876 567799999865433 35678999999999999999999987532 4468
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+||||+++++|.++++.... ..+++.++..++.+++.|++|||+. +|+||||||+||++++++.+|++|||++
T Consensus 77 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~ 149 (260)
T cd05070 77 IVTEYMSKGSLLDFLKDGEG----RALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLA 149 (260)
T ss_pred EEEEecCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceee
Confidence 99999999999999976432 2488999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
........ .......++..|+|||+..+..++.++||||||+++|||++ |+.||..... .+.....
T Consensus 150 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~-----~~~~~~~- 216 (260)
T cd05070 150 RLIEDNEY-------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN-----REVLEQV- 216 (260)
T ss_pred eeccCccc-------ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHHH-
Confidence 86543211 11112345678999999988899999999999999999999 8889864321 1111110
Q ss_pred cchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 047768 939 PEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCH 999 (1009)
Q Consensus 939 ~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~ 999 (1009)
...... .........+.+++.+|++.+|++|||++++.+.|+.
T Consensus 217 --------~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 217 --------ERGYRM----------PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred --------HcCCCC----------CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 000000 0011233468899999999999999999999988864
No 162
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=9.3e-35 Score=316.93 Aligned_cols=261 Identities=23% Similarity=0.363 Sum_probs=201.3
Q ss_pred hccCccCCcccccCCceEEEEEEec-----CCeEEEEEEeeccccc-chHHHHHHHHHHHhcCCCCcceEEeeeeccccC
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHE-----NGMLVAVKVINLEQKG-GSKSFAAECEALRSIRHRNLIKIVTICSSIDFK 773 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 773 (1009)
.++|.+.+.||+|+||.||+|.+.. .+..||+|.+...... ....+.+|+.++++++|+||+++++++...
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--- 81 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFER--- 81 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC---
Confidence 4678899999999999999999986 6788999988644322 245688999999999999999999986543
Q ss_pred CCceEEEEEeccCCCCHHHHHhccCCCC-CccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCC---
Q 047768 774 GVDFKALVYEYMQNGSLEEWLHQRDDQL-GICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDM--- 849 (1009)
Q Consensus 774 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~--- 849 (1009)
...++||||+++++|.+++....... ....+++.++..++.|++.|++|||+. +++||||||+||+++.++
T Consensus 82 --~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~ 156 (277)
T cd05036 82 --LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGR 156 (277)
T ss_pred --CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCc
Confidence 56789999999999999997654221 123589999999999999999999999 999999999999998754
Q ss_pred ceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCc
Q 047768 850 VAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGL 928 (1009)
Q Consensus 850 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~ 928 (1009)
.+|++|||+++........ ........+..|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 157 ~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~-- 228 (277)
T cd05036 157 VAKIADFGMARDIYRASYY------RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ-- 228 (277)
T ss_pred ceEeccCccccccCCccce------ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--
Confidence 6999999999876432211 01111233568999999999999999999999999999997 99998743221
Q ss_pred cHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 047768 929 TLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLC 998 (1009)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~ 998 (1009)
+... .+....... ....++..+.+++.+|++.+|++||++.||++.|.
T Consensus 229 ---~~~~---------~~~~~~~~~----------~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 229 ---EVME---------FVTGGGRLD----------PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred ---HHHH---------HHHcCCcCC----------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 1111 111000000 01123356889999999999999999999999875
No 163
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.3e-36 Score=325.81 Aligned_cols=248 Identities=23% Similarity=0.373 Sum_probs=202.5
Q ss_pred ccCCcccccCCceEEEEEEecCCeEEEEEEeeccc----ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 704 SSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ----KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 704 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
.....||+|+|-+||+|.+..+|..||=-.++..+ ......|..|+.+|+.++||||++++.++.+. .....-
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~---~n~~in 119 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDT---DNKTIN 119 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecC---CCceee
Confidence 34578999999999999999999988843332221 22236899999999999999999999998764 225677
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCC-CCceEEecccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDH-DMVAHVSDFGL 858 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~-~~~~kl~DfGl 858 (1009)
+|+|.+..|+|..|+++.+. ++...++.|++||++||.|||++ .|+|||||||.+||+|+. -|.|||+|.|+
T Consensus 120 ~iTEL~TSGtLr~Y~kk~~~------vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGL 192 (632)
T KOG0584|consen 120 FITELFTSGTLREYRKKHRR------VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGL 192 (632)
T ss_pred eeeecccCCcHHHHHHHhcc------CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhH
Confidence 89999999999999999875 88899999999999999999997 789999999999999965 58999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhc
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
|.....+ ....++|||.|||||... ..|.+.+||||||++++||+|+..||.........+.+......
T Consensus 193 Atl~r~s----------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiK 261 (632)
T KOG0584|consen 193 ATLLRKS----------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIK 261 (632)
T ss_pred HHHhhcc----------ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCC
Confidence 9977543 223378999999999866 89999999999999999999999999876555444444433334
Q ss_pred cchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 939 PEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 939 ~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
|+.+..+-| .++.+++.+|+.. .++|||+.|++.
T Consensus 262 P~sl~kV~d----------------------Pevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 262 PAALSKVKD----------------------PEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred HHHhhccCC----------------------HHHHHHHHHHhcC-chhccCHHHHhh
Confidence 444444433 2467899999999 999999999975
No 164
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=6.6e-35 Score=325.17 Aligned_cols=242 Identities=21% Similarity=0.267 Sum_probs=191.2
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCCCce
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
+|.+.+.||+|+||+||+|+++.+++.||||+++.... .....+..|..++... +|++|+++++++.. .+.
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-----~~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQT-----MDR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEec-----CCE
Confidence 47888999999999999999998899999999975422 2234566788888877 58999999888654 367
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++||||+++|+|.+++..... +++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~~------~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG 146 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQVGR------FKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred EEEEEcCCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCC
Confidence 8999999999999999876542 88999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .......
T Consensus 147 ~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~-----~~~~~~i 213 (323)
T cd05616 147 MCKENMWDG--------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DELFQSI 213 (323)
T ss_pred CceecCCCC--------CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH-----HHHHHHH
Confidence 997543211 122245689999999999999999999999999999999999999974321 1111111
Q ss_pred ccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCH
Q 047768 938 LPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEM 990 (1009)
Q Consensus 938 ~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~ 990 (1009)
..... ..+ .....++.+++.+|++.||.+|++.
T Consensus 214 --------~~~~~-~~p-----------~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 214 --------MEHNV-AYP-----------KSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred --------HhCCC-CCC-----------CcCCHHHHHHHHHHcccCHHhcCCC
Confidence 11000 000 0122356789999999999999985
No 165
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.1e-34 Score=315.09 Aligned_cols=260 Identities=27% Similarity=0.441 Sum_probs=201.7
Q ss_pred ccCccCCcccccCCceEEEEEEecCCe---EEEEEEeeccc-ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCc
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGM---LVAVKVINLEQ-KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVD 776 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~---~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 776 (1009)
.+|.+.+.||+|+||.||+|.++.+++ .||||+++... ......+..|++++++++||||+++++++.. ..
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~-----~~ 78 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK-----SR 78 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECC-----CC
Confidence 457888999999999999999876554 69999986442 2234679999999999999999999998643 36
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
..++||||+++++|.+++..... .+++.+++.++.|++.|++|||++ +++||||||+||+++.++.+|++||
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~df 150 (269)
T cd05065 79 PVMIITEFMENGALDSFLRQNDG-----QFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDF 150 (269)
T ss_pred ceEEEEecCCCCcHHHHHhhCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCC
Confidence 78999999999999999986543 388999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHH
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 935 (1009)
|+++........... ....+...+..|+|||++.+..++.++|||||||++||+++ |..||...... .......
T Consensus 151 g~~~~~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~--~~~~~i~ 225 (269)
T cd05065 151 GLSRFLEDDTSDPTY---TSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--DVINAIE 225 (269)
T ss_pred ccccccccCcccccc---ccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH--HHHHHHH
Confidence 998866443211000 01111122467999999999999999999999999999887 99998643211 1111110
Q ss_pred HhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 047768 936 RALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHA 1000 (1009)
Q Consensus 936 ~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i 1000 (1009)
.... . ....+++..+.+++.+||+.+|++||++.+++..|+++
T Consensus 226 ------------~~~~-~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 226 ------------QDYR-L---------PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ------------cCCc-C---------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0000 0 00113345678999999999999999999999998764
No 166
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=7.6e-35 Score=323.73 Aligned_cols=242 Identities=22% Similarity=0.263 Sum_probs=192.4
Q ss_pred CcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCCCceEEEEE
Q 047768 707 NTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKGVDFKALVY 782 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 782 (1009)
+.||+|+||+||+|.++.+++.||||+++... ......+.+|+++++.+ +||||+++++++.. ....++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~-----~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQT-----KDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-----CCEEEEEE
Confidence 46999999999999999889999999997542 22345677888999888 79999999998654 36789999
Q ss_pred eccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccccc
Q 047768 783 EYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 862 (1009)
Q Consensus 783 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~ 862 (1009)
||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 146 (318)
T cd05570 76 EYVNGGDLMFHIQRSG------RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEG 146 (318)
T ss_pred cCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeec
Confidence 9999999999987654 289999999999999999999999 9999999999999999999999999998753
Q ss_pred CCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchh
Q 047768 863 SASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKV 942 (1009)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 942 (1009)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .........
T Consensus 147 ~~~~--------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~-----~~~~~~~i~---- 209 (318)
T cd05570 147 ILGG--------VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD-----EDELFQSIL---- 209 (318)
T ss_pred CcCC--------CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC-----HHHHHHHHH----
Confidence 2211 11223568999999999999999999999999999999999999996432 111111110
Q ss_pred hhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 047768 943 MEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEM-----TDVVV 995 (1009)
Q Consensus 943 ~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~-----~evl~ 995 (1009)
..... .+ ......+.+++.+|++.||++||++ .++++
T Consensus 210 ----~~~~~-~~-----------~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 210 ----EDEVR-YP-----------RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred ----cCCCC-CC-----------CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 00000 00 1123457899999999999999999 77754
No 167
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-34 Score=319.77 Aligned_cols=252 Identities=25% Similarity=0.324 Sum_probs=206.8
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc---chHHHHHHHHHHHhcC-CCCcceEEeeeeccccCCC
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG---GSKSFAAECEALRSIR-HRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~ 775 (1009)
...|.+.+.||+|.||+||+++.+.+|+.+|+|+++..... ....+.+|+++|+++. ||||+.+.+++.. .
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~-----~ 108 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFED-----P 108 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEc-----C
Confidence 35788889999999999999999999999999999655433 2358999999999998 9999999999654 4
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCC----Cce
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHD----MVA 851 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~----~~~ 851 (1009)
...++|||++.||.|.+.+... .+++.++..++.|++.++.|||+. +|||||+||+|+|+... +.+
T Consensus 109 ~~~~lvmEL~~GGeLfd~i~~~-------~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~i 178 (382)
T KOG0032|consen 109 DSVYLVMELCEGGELFDRIVKK-------HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRI 178 (382)
T ss_pred CeEEEEEEecCCchHHHHHHHc-------cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcE
Confidence 6899999999999999999876 189999999999999999999998 99999999999999543 579
Q ss_pred EEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHH
Q 047768 852 HVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLH 931 (1009)
Q Consensus 852 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~ 931 (1009)
|++|||++...... ......+||+.|+|||++....|+.++||||+||++|.|+.|..||..........
T Consensus 179 k~~DFGla~~~~~~---------~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~- 248 (382)
T KOG0032|consen 179 KLIDFGLAKFIKPG---------ERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL- 248 (382)
T ss_pred EEeeCCCceEccCC---------ceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-
Confidence 99999999977641 34556899999999999999999999999999999999999999998654321111
Q ss_pred HHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 932 EFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 932 ~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
.... .+. ++-++.+. ......-+++..++..||..|+|+.++++.
T Consensus 249 ~i~~----~~~-~f~~~~w~---------------~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 249 AILR----GDF-DFTSEPWD---------------DISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred HHHc----CCC-CCCCCCcc---------------ccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 1111 111 11111111 223456789999999999999999999884
No 168
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=6.3e-35 Score=330.10 Aligned_cols=277 Identities=19% Similarity=0.212 Sum_probs=201.2
Q ss_pred HHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeeccc-cCC
Q 047768 698 KATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSID-FKG 774 (1009)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~ 774 (1009)
...++|.+.+.||+|+||.||+|.+..+++.||||++..... ...+.+.+|+.+++.++||||+++++++.... ...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 345789999999999999999999988899999999864322 23456788999999999999999999875432 123
Q ss_pred CceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEe
Q 047768 775 VDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 854 (1009)
Q Consensus 775 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~ 854 (1009)
....++||||+++ ++.+++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~--------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~ 161 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 161 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh--------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEe
Confidence 3467999999964 77777653 278889999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHH
Q 047768 855 DFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFA 934 (1009)
Q Consensus 855 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 934 (1009)
|||+++..... .......||..|+|||++.+..++.++|||||||++|||++|+.||....... ......
T Consensus 162 Dfg~~~~~~~~---------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~ 231 (355)
T cd07874 162 DFGLARTAGTS---------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVI 231 (355)
T ss_pred eCcccccCCCc---------cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH
Confidence 99999865432 11223568999999999999999999999999999999999999996432110 011111
Q ss_pred HHh----------ccchhhhccCCCCC----Chhhhhhh----ccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 935 KRA----------LPEKVMEIVDPSLL----PLEEERTN----SRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 935 ~~~----------~~~~~~~~~d~~l~----~~~~~r~~----~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
... ........++..-. ..+...+. ...........++.+++.+|++.||++|||+.|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 232 EQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 100 00011111110000 00000000 0000111123467899999999999999999999874
No 169
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=4.6e-35 Score=324.21 Aligned_cols=196 Identities=28% Similarity=0.374 Sum_probs=169.6
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcC------CCCcceEEeeeeccccCCC
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIR------HRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~~~~~~~~~~~~ 775 (1009)
+|.+.+.||+|+||.|.+|.+..+++.||||+++.... -..+-..|+.+|..++ --|+|++++++.. .
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f-----r 260 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF-----R 260 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc-----c
Confidence 88999999999999999999999999999999964432 3455677999999986 3689999998654 3
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCC--ceEE
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDM--VAHV 853 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~--~~kl 853 (1009)
.+.|+|+|.+ .-+|+++++.+... .++...++.|+.||+.||.+||+. +|||+||||+|||+.+.. .|||
T Consensus 261 ~HlciVfELL-~~NLYellK~n~f~----Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKV 332 (586)
T KOG0667|consen 261 NHLCIVFELL-STNLYELLKNNKFR----GLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKV 332 (586)
T ss_pred cceeeeehhh-hhhHHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeE
Confidence 7899999998 55999999987653 489999999999999999999999 999999999999997554 7999
Q ss_pred eccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcc
Q 047768 854 SDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTES 922 (1009)
Q Consensus 854 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~ 922 (1009)
+|||.|++.....+ ...-+..|+|||++.+.+|+.+.||||||||++||++|.+-|..
T Consensus 333 IDFGSSc~~~q~vy-----------tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG 390 (586)
T KOG0667|consen 333 IDFGSSCFESQRVY-----------TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPG 390 (586)
T ss_pred EecccccccCCcce-----------eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCC
Confidence 99999997664321 35567889999999999999999999999999999999776653
No 170
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=9.7e-35 Score=325.43 Aligned_cols=252 Identities=24% Similarity=0.291 Sum_probs=193.6
Q ss_pred cCccCCcccccCCceEEEEEEe---cCCeEEEEEEeeccc----ccchHHHHHHHHHHHhc-CCCCcceEEeeeeccccC
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLH---ENGMLVAVKVINLEQ----KGGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFK 773 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 773 (1009)
+|++.+.||+|+||.||+|+.. .+++.||+|+++... ....+.+.+|+++++.+ +|++|+++++++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~---- 76 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQT---- 76 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEec----
Confidence 4788899999999999998874 468899999986432 12235678899999999 59999999987543
Q ss_pred CCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEE
Q 047768 774 GVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHV 853 (1009)
Q Consensus 774 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl 853 (1009)
....++||||+++|+|.+++..+.. +++.++..++.|++.||+|||++ +|+||||||+|||++.++.+||
T Consensus 77 -~~~~~lv~e~~~~g~L~~~l~~~~~------~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl 146 (332)
T cd05614 77 -EAKLHLILDYVSGGEMFTHLYQRDN------FSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVL 146 (332)
T ss_pred -CCEEEEEEeCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEE
Confidence 3678999999999999999976543 88999999999999999999999 9999999999999999999999
Q ss_pred eccccccccCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHH
Q 047768 854 SDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHE 932 (1009)
Q Consensus 854 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~ 932 (1009)
+|||+++....... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||....... ....
T Consensus 147 ~DfG~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~~~~ 218 (332)
T cd05614 147 TDFGLSKEFLSEEK-------ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN-TQSE 218 (332)
T ss_pred eeCcCCccccccCC-------CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCC-CHHH
Confidence 99999986533211 122245789999999998875 47899999999999999999999996432211 1111
Q ss_pred HHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 047768 933 FAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRM-----EMTDVVV 995 (1009)
Q Consensus 933 ~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rp-----t~~evl~ 995 (1009)
....... .++.+ .......+.+++.+|++.||++|| +++++++
T Consensus 219 ~~~~~~~------~~~~~--------------~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 219 VSRRILK------CDPPF--------------PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred HHHHHhc------CCCCC--------------CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 1111100 00000 001223567899999999999999 6667764
No 171
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.4e-34 Score=318.25 Aligned_cols=266 Identities=23% Similarity=0.368 Sum_probs=205.4
Q ss_pred HhccCccCCcccccCCceEEEEEEe-------cCCeEEEEEEeeccc-ccchHHHHHHHHHHHhc-CCCCcceEEeeeec
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLH-------ENGMLVAVKVINLEQ-KGGSKSFAAECEALRSI-RHRNLIKIVTICSS 769 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 769 (1009)
..++|.+.+.||+|+||.||+|++. .++..||+|.++... ....+.+.+|+.+++.+ +||||+++++++..
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 3567889999999999999999853 234579999886432 22346788999999999 89999999998764
Q ss_pred cccCCCceEEEEEeccCCCCHHHHHhccCCCC----------CccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCC
Q 047768 770 IDFKGVDFKALVYEYMQNGSLEEWLHQRDDQL----------GICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLK 839 (1009)
Q Consensus 770 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk 839 (1009)
. ...++||||+++|+|.+++....... ....+++.++..++.|++.|+.|||++ +|+|||||
T Consensus 93 ~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlk 164 (304)
T cd05101 93 D-----GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLA 164 (304)
T ss_pred C-----CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeecccc
Confidence 3 67899999999999999998653211 112478899999999999999999999 99999999
Q ss_pred CCceeeCCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCC
Q 047768 840 PSNVLLDHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRR 918 (1009)
Q Consensus 840 ~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~ 918 (1009)
|+||+++.++.+||+|||.++........ .......++..|+|||++.+..++.++||||||+++|||++ |..
T Consensus 165 p~Nili~~~~~~kl~D~g~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~ 238 (304)
T cd05101 165 ARNVLVTENNVMKIADFGLARDVNNIDYY------KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 238 (304)
T ss_pred cceEEEcCCCcEEECCCccceeccccccc------ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999876432211 11122345678999999999999999999999999999999 788
Q ss_pred CCcccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 047768 919 PTESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLC 998 (1009)
Q Consensus 919 p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~ 998 (1009)
||... ...+.......... .. ....+...+.+++.+||+.+|++||++.|+++.|+
T Consensus 239 p~~~~-----~~~~~~~~~~~~~~--------~~-----------~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~ 294 (304)
T cd05101 239 PYPGI-----PVEELFKLLKEGHR--------MD-----------KPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLD 294 (304)
T ss_pred CcccC-----CHHHHHHHHHcCCc--------CC-----------CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHH
Confidence 87532 12222211100000 00 01133456889999999999999999999999998
Q ss_pred HHHH
Q 047768 999 HARQ 1002 (1009)
Q Consensus 999 ~i~~ 1002 (1009)
++..
T Consensus 295 ~~~~ 298 (304)
T cd05101 295 RILT 298 (304)
T ss_pred HHHH
Confidence 8765
No 172
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-36 Score=319.52 Aligned_cols=245 Identities=28% Similarity=0.368 Sum_probs=200.1
Q ss_pred CccCCcccccCCceEEEEEEecCCeEEEEEEeecccccch---HHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 703 FSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGS---KSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
|.-.+-||.|+||.||-|.+..+...||||++....++.. ..+.+|++.+++++|||.+.+-||+... ...+
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre-----~TaW 102 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLRE-----HTAW 102 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeecc-----chHH
Confidence 4445779999999999999999999999999976655443 3578899999999999999999997542 5568
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+||||| -||-.|.+.-++. ++.+.++..|+.+.+.||+|||+. +.||||||+.|||+++.|.||++|||.|
T Consensus 103 LVMEYC-lGSAsDlleVhkK-----plqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSA 173 (948)
T KOG0577|consen 103 LVMEYC-LGSASDLLEVHKK-----PLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSA 173 (948)
T ss_pred HHHHHH-hccHHHHHHHHhc-----cchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccch
Confidence 999999 5688888876664 388999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCC---CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHH
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG---GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKR 936 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 936 (1009)
....+. ..++|||.|||||++.. +.|+-++||||+||+..|+..+++|+..|..- ..+..++.
T Consensus 174 si~~PA------------nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM-SALYHIAQ- 239 (948)
T KOG0577|consen 174 SIMAPA------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIAQ- 239 (948)
T ss_pred hhcCch------------hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH-HHHHHHHh-
Confidence 876543 34789999999998644 78999999999999999999999997654211 01111111
Q ss_pred hccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 937 ALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 937 ~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
--.+.+ ...+|...+..++..|++.-|.+|||.+++++.
T Consensus 240 --------NesPtL-------------qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 240 --------NESPTL-------------QSNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred --------cCCCCC-------------CCchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 111111 133677788999999999999999999988753
No 173
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.5e-34 Score=320.09 Aligned_cols=272 Identities=23% Similarity=0.312 Sum_probs=202.0
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc-chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG-GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
++|++.+.||+|+||.||+|.+..++..||+|.++..... ....+.+|++++++++||||+++++++... +..+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 75 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSD-----GEIS 75 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC-----CEEE
Confidence 3688999999999999999999989999999998654322 235688999999999999999999987543 6889
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+|+||+++++|.++++... .+++..+..++.|+++||+|||+.+ +++||||||+||+++.++.+||+|||++
T Consensus 76 lv~ey~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~ 147 (308)
T cd06615 76 ICMEHMDGGSLDQVLKKAG------RIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVS 147 (308)
T ss_pred EEeeccCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCc
Confidence 9999999999999998654 3889999999999999999999732 8999999999999999999999999998
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhcc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
...... ......|+..|+|||++.+..++.++|||||||++|||++|+.||...... ....+......
T Consensus 148 ~~~~~~----------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~ 215 (308)
T cd06615 148 GQLIDS----------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK--ELEAMFGRPVS 215 (308)
T ss_pred cccccc----------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh--hHHHhhcCccc
Confidence 754321 112356889999999998888999999999999999999999998643211 11111110000
Q ss_pred ch-hhhccCC-CCCChhhhh----------hh---ccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 047768 940 EK-VMEIVDP-SLLPLEEER----------TN---SRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKL 997 (1009)
Q Consensus 940 ~~-~~~~~d~-~l~~~~~~r----------~~---~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L 997 (1009)
.. ....... ........+ .. ...........++.+++.+|++.+|++||++.|+++.-
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 216 EGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred cccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 00 0000000 000000000 00 00000011344688999999999999999999998764
No 174
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=2.6e-34 Score=309.66 Aligned_cols=251 Identities=32% Similarity=0.418 Sum_probs=199.4
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
.++|.+.+.||+|+||.||+|... |..||+|.++.. ...+.+.+|+.++++++|+|++++++++.. .....+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~~ 76 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVE----EKGGLY 76 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEc----CCCceE
Confidence 357888999999999999999874 788999998533 235678999999999999999999997543 235679
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+|+||+++++|.+++++... ..+++..+..++.|++.|++|||++ +|+||||||+||++++++.+|++|||++
T Consensus 77 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~ 149 (256)
T cd05082 77 IVTEYMAKGSLVDYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLT 149 (256)
T ss_pred EEEECCCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccc
Confidence 99999999999999986543 2478999999999999999999998 9999999999999999999999999998
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
+...... ....++..|+|||++.+..++.++|||||||++|||++ |+.||.... .........
T Consensus 150 ~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~-----~~~~~~~~~ 213 (256)
T cd05082 150 KEASSTQ-----------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----LKDVVPRVE 213 (256)
T ss_pred eeccccC-----------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHh
Confidence 7543211 12234568999999999999999999999999999998 999986321 111111110
Q ss_pred cchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 047768 939 PEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHA 1000 (1009)
Q Consensus 939 ~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i 1000 (1009)
..... .....++..+.+++.+|++.+|++|||++++++.|+++
T Consensus 214 ---------~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 214 ---------KGYKM----------DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred ---------cCCCC----------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 00000 00112345688999999999999999999999998753
No 175
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=2.3e-34 Score=312.32 Aligned_cols=257 Identities=22% Similarity=0.295 Sum_probs=197.8
Q ss_pred HHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 698 KATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
.+++.+.....||+|+||.||+|.+..++..||+|.+........+.+.+|++++++++|+||+++++++... ..
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~ 79 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSEN-----GF 79 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccC-----CE
Confidence 3455566667899999999999999888999999998655444556889999999999999999999987643 67
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCC-CCceEEecc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDH-DMVAHVSDF 856 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~-~~~~kl~Df 856 (1009)
.++|+||+++++|.+++...... ...++..+..++.|++.|++|||+. +|+||||||+||+++. ++.+||+||
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~df 153 (268)
T cd06624 80 FKIFMEQVPGGSLSALLRSKWGP---LKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDF 153 (268)
T ss_pred EEEEEecCCCCCHHHHHHHhccc---CCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecc
Confidence 89999999999999999864321 0127888899999999999999998 9999999999999976 679999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCCCC--CCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHH
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGE--ASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFA 934 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 934 (1009)
|.+....... .......|+..|+|||++.... ++.++||||||+++|||++|+.||.......... +.
T Consensus 154 g~~~~~~~~~--------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~--~~ 223 (268)
T cd06624 154 GTSKRLAGIN--------PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM--FK 223 (268)
T ss_pred hhheecccCC--------CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH--hh
Confidence 9987654321 1112245789999999986644 7899999999999999999999986432111000 00
Q ss_pred HHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 935 KRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 935 ~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
. . ... .. ...+.....++.+++.+|++.+|.+|||+.|+++
T Consensus 224 ~-~----~~~----~~-----------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 224 V-G----MFK----IH-----------PEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred h-h----hhc----cC-----------CCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 0 0 000 00 0011123345789999999999999999999975
No 176
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.7e-34 Score=329.73 Aligned_cols=207 Identities=22% Similarity=0.306 Sum_probs=173.0
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
.|++.+.||+|+||+||+|+.+.+++.||||++.... ......+.+|++++++++||||+++++++.. ....
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~-----~~~~ 76 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQD-----KDNL 76 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEe-----CCEE
Confidence 5888999999999999999999899999999986432 1224568899999999999999999998654 3678
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
++||||+++|+|.+++.+.. .+++..+..++.|++.||+|||+. +||||||||+|||++.++.+||+|||+
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~------~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGl 147 (382)
T cd05625 77 YFVMDYIPGGDMMSLLIRMG------IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGL 147 (382)
T ss_pred EEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCC
Confidence 99999999999999997654 278889999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCCc---------------------------------------cccCCccccccccccccCccccCCCCCCC
Q 047768 859 AKFLSASPLGNV---------------------------------------VETPSSSIGVKGTIGYVAPEYGLGGEASM 899 (1009)
Q Consensus 859 a~~~~~~~~~~~---------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 899 (1009)
++.......... ...........||+.|+|||++.+..++.
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (382)
T cd05625 148 CTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 227 (382)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCC
Confidence 864321100000 00001112357999999999999999999
Q ss_pred cccchHHHHHHHHHHhCCCCCcc
Q 047768 900 RGGVYSYGILLLEIFTRRRPTES 922 (1009)
Q Consensus 900 ~~DvwS~Gvvl~elltg~~p~~~ 922 (1009)
++||||+||++|||++|+.||..
T Consensus 228 ~~DiwSlGvil~elltG~~Pf~~ 250 (382)
T cd05625 228 LCDWWSVGVILYEMLVGQPPFLA 250 (382)
T ss_pred eeeEEechHHHHHHHhCCCCCCC
Confidence 99999999999999999999974
No 177
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=6.3e-35 Score=325.32 Aligned_cols=238 Identities=25% Similarity=0.276 Sum_probs=186.7
Q ss_pred CcccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHH-HHHhcCCCCcceEEeeeeccccCCCceEEEEE
Q 047768 707 NTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECE-ALRSIRHRNLIKIVTICSSIDFKGVDFKALVY 782 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 782 (1009)
+.||+|+||+||+|+++.+|+.||||++..... .....+..|.. +++.++||||+++++++.. ....++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~-----~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT-----ADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEe-----CCEEEEEE
Confidence 469999999999999998999999999964321 12234455554 4678899999999988654 36789999
Q ss_pred eccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccccc
Q 047768 783 EYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 862 (1009)
Q Consensus 783 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~ 862 (1009)
||+++|+|.+++.... .+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~ 146 (323)
T cd05575 76 DYVNGGELFFHLQRER------SFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (323)
T ss_pred cCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCccc
Confidence 9999999999997654 388999999999999999999999 9999999999999999999999999998753
Q ss_pred CCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchh
Q 047768 863 SASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKV 942 (1009)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 942 (1009)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+.......
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~--- 210 (323)
T cd05575 147 IEHS--------KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-----TAEMYDNILN--- 210 (323)
T ss_pred ccCC--------CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC-----HHHHHHHHHc---
Confidence 2211 12234568999999999999999999999999999999999999997432 1122111111
Q ss_pred hhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHH
Q 047768 943 MEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMT 991 (1009)
Q Consensus 943 ~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~ 991 (1009)
...... ......+.+++.+|++.||++||++.
T Consensus 211 -----~~~~~~------------~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 211 -----KPLRLK------------PNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred -----CCCCCC------------CCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 100000 01134577999999999999999985
No 178
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.4e-34 Score=319.74 Aligned_cols=261 Identities=25% Similarity=0.418 Sum_probs=202.7
Q ss_pred hccCccCCcccccCCceEEEEEEecCCe----EEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCC
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGM----LVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKG 774 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 774 (1009)
.++|...+.||+|+||.||+|.+..++. .||+|.+..... .....+.+|+.++++++||||++++++|..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~----- 80 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS----- 80 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC-----
Confidence 3567888999999999999999876665 578888754322 123468899999999999999999998753
Q ss_pred CceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEe
Q 047768 775 VDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 854 (1009)
Q Consensus 775 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~ 854 (1009)
...++++||+++|+|.+++..... .+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+
T Consensus 81 -~~~~~v~e~~~~g~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~ 151 (303)
T cd05110 81 -PTIQLVTQLMPHGCLLDYVHEHKD-----NIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKIT 151 (303)
T ss_pred -CCceeeehhcCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEc
Confidence 235789999999999999987543 388999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHH
Q 047768 855 DFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEF 933 (1009)
Q Consensus 855 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~ 933 (1009)
|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |+.||...... ....+
T Consensus 152 Dfg~~~~~~~~~~------~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~--~~~~~ 223 (303)
T cd05110 152 DFGLARLLEGDEK------EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR--EIPDL 223 (303)
T ss_pred cccccccccCccc------ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHH
Confidence 9999986643211 011222345778999999999999999999999999999998 89998643211 11111
Q ss_pred HHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 047768 934 AKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQNF 1004 (1009)
Q Consensus 934 ~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~~~ 1004 (1009)
.. ..... + ....+...+.+++..||..+|++||+++|+++.++++.++.
T Consensus 224 ~~------------~~~~~-~---------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 224 LE------------KGERL-P---------QPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred HH------------CCCCC-C---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 11 00000 0 00112345789999999999999999999999999876553
No 179
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=2.5e-34 Score=316.54 Aligned_cols=268 Identities=25% Similarity=0.376 Sum_probs=199.0
Q ss_pred hccCccCCcccccCCceEEEEEEecC--------------CeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHEN--------------GMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIV 764 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~--------------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~ 764 (1009)
.++|.+.+.||+|+||.||+|..... ...||+|+++.... .....+.+|++++++++|+|+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 35789999999999999999987532 23589999864422 2235688999999999999999999
Q ss_pred eeeeccccCCCceEEEEEeccCCCCHHHHHhccCCC------CCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCC
Q 047768 765 TICSSIDFKGVDFKALVYEYMQNGSLEEWLHQRDDQ------LGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDL 838 (1009)
Q Consensus 765 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdl 838 (1009)
+++... ...++||||+++++|.+++...... .....+++..+..++.|++.|++|||+. +++||||
T Consensus 84 ~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dl 155 (295)
T cd05097 84 GVCVSD-----DPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDL 155 (295)
T ss_pred EEEcCC-----CccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---Ceecccc
Confidence 997543 6789999999999999999654311 1123478899999999999999999999 9999999
Q ss_pred CCCceeeCCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh--C
Q 047768 839 KPSNVLLDHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT--R 916 (1009)
Q Consensus 839 k~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt--g 916 (1009)
||+||++++++.+|++|||+++........ .......++..|+|||+..++.++.++|||||||++|||++ |
T Consensus 156 kp~Nill~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~ 229 (295)
T cd05097 156 ATRNCLVGNHYTIKIADFGMSRNLYSGDYY------RIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCK 229 (295)
T ss_pred ChhhEEEcCCCcEEecccccccccccCcce------eccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCC
Confidence 999999999999999999999865432110 11122345778999999999999999999999999999998 5
Q ss_pred CCCCcccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 917 RRPTESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 917 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
..||...... ................. .. ......+..+.+++.+|++.||++||++++|++.
T Consensus 230 ~~p~~~~~~~--~~~~~~~~~~~~~~~~~----~~-----------~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~ 292 (295)
T cd05097 230 EQPYSLLSDE--QVIENTGEFFRNQGRQI----YL-----------SQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHF 292 (295)
T ss_pred CCCCcccChH--HHHHHHHHhhhhccccc----cC-----------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 5676543211 01110000000000000 00 0011223568899999999999999999999998
Q ss_pred HH
Q 047768 997 LC 998 (1009)
Q Consensus 997 L~ 998 (1009)
|+
T Consensus 293 l~ 294 (295)
T cd05097 293 LR 294 (295)
T ss_pred Hh
Confidence 85
No 180
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=9.8e-35 Score=320.26 Aligned_cols=268 Identities=24% Similarity=0.364 Sum_probs=202.0
Q ss_pred hccCccCCcccccCCceEEEEEEecCC----------------eEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcce
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENG----------------MLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIK 762 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~----------------~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~ 762 (1009)
.++|.+.+.||+|+||.||+|.+...+ ..||+|++..... ...+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 357889999999999999999876433 5689999865432 23467889999999999999999
Q ss_pred EEeeeeccccCCCceEEEEEeccCCCCHHHHHhccCCCC-----CccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecC
Q 047768 763 IVTICSSIDFKGVDFKALVYEYMQNGSLEEWLHQRDDQL-----GICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGD 837 (1009)
Q Consensus 763 l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrd 837 (1009)
+++++... ...++|+||+++++|.+++....... ....+++..++.++.|++.|++|||+. +|+|||
T Consensus 84 ~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~d 155 (296)
T cd05051 84 LLGVCTVD-----PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRD 155 (296)
T ss_pred EEEEEecC-----CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccc
Confidence 99987543 67899999999999999997654211 112489999999999999999999998 999999
Q ss_pred CCCCceeeCCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh--
Q 047768 838 LKPSNVLLDHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-- 915 (1009)
Q Consensus 838 lk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-- 915 (1009)
|||+||+++.++.++++|||+++........ .......++..|+|||++.+..++.++|||||||++|||++
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~ 229 (296)
T cd05051 156 LATRNCLVGKNYTIKIADFGMSRNLYSSDYY------RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLC 229 (296)
T ss_pred cchhceeecCCCceEEccccceeecccCcce------eecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcC
Confidence 9999999999999999999999865432211 11123446788999999998899999999999999999998
Q ss_pred CCCCCcccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 916 RRRPTESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 916 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
|..||....... ............ +... . ......++.++.+++.+|++.||++|||+.|+++
T Consensus 230 ~~~p~~~~~~~~--~~~~~~~~~~~~-----~~~~---~-------~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 230 REQPYEHLTDQQ--VIENAGHFFRDD-----GRQI---Y-------LPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred CCCCCCCcChHH--HHHHHHhccccc-----cccc---c-------CCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 677775432110 001000000000 0000 0 0001123356899999999999999999999998
Q ss_pred HHH
Q 047768 996 KLC 998 (1009)
Q Consensus 996 ~L~ 998 (1009)
.|+
T Consensus 293 ~L~ 295 (296)
T cd05051 293 FLQ 295 (296)
T ss_pred Hhc
Confidence 875
No 181
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.8e-34 Score=312.97 Aligned_cols=258 Identities=28% Similarity=0.446 Sum_probs=201.6
Q ss_pred ccCccCCcccccCCceEEEEEEecCC---eEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCc
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENG---MLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVD 776 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 776 (1009)
.+|.+.+.||+|+||.||+|.++.++ ..||+|.++.... ...+.+.+|+.++++++||||+++++++.. .+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 78 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK-----SK 78 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-----CC
Confidence 57888999999999999999986433 4799998864322 234678999999999999999999998754 36
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
..++||||+++++|.+++..... .+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++||
T Consensus 79 ~~~lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~df 150 (267)
T cd05066 79 PVMIVTEYMENGSLDAFLRKHDG-----QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDF 150 (267)
T ss_pred ccEEEEEcCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCC
Confidence 78999999999999999986543 389999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHH
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 935 (1009)
|+++........ ........++..|+|||++.+..++.++||||||+++||+++ |+.||...... +...
T Consensus 151 g~~~~~~~~~~~-----~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~-----~~~~ 220 (267)
T cd05066 151 GLSRVLEDDPEA-----AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ-----DVIK 220 (267)
T ss_pred Ccccccccccce-----eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH-----HHHH
Confidence 999876542210 011112234568999999999999999999999999999887 99998643211 1111
Q ss_pred HhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 047768 936 RALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHA 1000 (1009)
Q Consensus 936 ~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i 1000 (1009)
.. .+. .. .+ ....++..+.+++.+|++.+|.+||+|.++++.|.++
T Consensus 221 ~~--------~~~-~~-~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 221 AI--------EEG-YR-LP---------APMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HH--------hCC-Cc-CC---------CCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 00 000 00 00 0112344678999999999999999999999999875
No 182
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.8e-34 Score=324.21 Aligned_cols=268 Identities=24% Similarity=0.374 Sum_probs=202.7
Q ss_pred hccCccCCcccccCCceEEEEEEe-----cCCeEEEEEEeeccccc-chHHHHHHHHHHHhc-CCCCcceEEeeeecccc
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLH-----ENGMLVAVKVINLEQKG-GSKSFAAECEALRSI-RHRNLIKIVTICSSIDF 772 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 772 (1009)
.++|.+.+.||+|+||+||+|.+. .+++.||||+++..... ....+.+|+.++.++ +||||++++++|...
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-- 83 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP-- 83 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecC--
Confidence 357999999999999999999853 35789999999654322 235688899999999 689999999987542
Q ss_pred CCCceEEEEEeccCCCCHHHHHhccCCCC---------------------------------------------------
Q 047768 773 KGVDFKALVYEYMQNGSLEEWLHQRDDQL--------------------------------------------------- 801 (1009)
Q Consensus 773 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------------------------------------------------- 801 (1009)
....++||||+++|+|.+++.......
T Consensus 84 --~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 84 --GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred --CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 346789999999999999987532100
Q ss_pred ----------CccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccCCCCCCCcc
Q 047768 802 ----------GICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSASPLGNVV 871 (1009)
Q Consensus 802 ----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 871 (1009)
....+++.++..++.|+++|++|||++ +|+||||||+||++++++.+|++|||+++........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~--- 235 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY--- 235 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcch---
Confidence 012368888999999999999999999 9999999999999999999999999999865332110
Q ss_pred ccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhccchhhhccCCCC
Q 047768 872 ETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRALPEKVMEIVDPSL 950 (1009)
Q Consensus 872 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 950 (1009)
.......++..|+|||++.+..++.++||||||+++|||++ |..||...... ...... .... ..
T Consensus 236 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----~~~~~~-~~~~-------~~ 300 (343)
T cd05103 236 ---VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRR-LKEG-------TR 300 (343)
T ss_pred ---hhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc----HHHHHH-Hhcc-------CC
Confidence 11112345678999999999999999999999999999997 89998643211 011110 0000 00
Q ss_pred CChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 047768 951 LPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQN 1003 (1009)
Q Consensus 951 ~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~~ 1003 (1009)
...+ .....++.+++.+||+.+|++|||+.|+++.|+.+.++
T Consensus 301 ~~~~-----------~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 301 MRAP-----------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred CCCC-----------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 0000 01123578999999999999999999999999988753
No 183
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.8e-34 Score=318.03 Aligned_cols=270 Identities=24% Similarity=0.339 Sum_probs=206.7
Q ss_pred hccCccCCcccccCCceEEEEEEec-------CCeEEEEEEeecccc-cchHHHHHHHHHHHhc-CCCCcceEEeeeecc
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHE-------NGMLVAVKVINLEQK-GGSKSFAAECEALRSI-RHRNLIKIVTICSSI 770 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 770 (1009)
.++|.+.+.||+|+||.||+|++.. ++..||+|.++.... .....+.+|+++++++ +||||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 3579999999999999999998743 235799999875422 2345688899999999 799999999997643
Q ss_pred ccCCCceEEEEEeccCCCCHHHHHhccCCCC----------CccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCC
Q 047768 771 DFKGVDFKALVYEYMQNGSLEEWLHQRDDQL----------GICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKP 840 (1009)
Q Consensus 771 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~ 840 (1009)
...++||||+++|+|.+++....... ....+++.++..++.|++.|++|||+. +++||||||
T Consensus 97 -----~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp 168 (307)
T cd05098 97 -----GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAA 168 (307)
T ss_pred -----CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccH
Confidence 57899999999999999998653211 112488999999999999999999998 999999999
Q ss_pred CceeeCCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCC
Q 047768 841 SNVLLDHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRP 919 (1009)
Q Consensus 841 ~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p 919 (1009)
+||+++.++.+||+|||.++........ .......+++.|+|||++.+..++.++|||||||++|||++ |+.|
T Consensus 169 ~Nill~~~~~~kL~dfg~a~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p 242 (307)
T cd05098 169 RNVLVTEDNVMKIADFGLARDIHHIDYY------KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 242 (307)
T ss_pred HheEEcCCCcEEECCCcccccccccchh------hccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCC
Confidence 9999999999999999999765432110 11112234578999999999999999999999999999998 8888
Q ss_pred CcccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 047768 920 TESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCH 999 (1009)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~ 999 (1009)
|... ......... ...... .....+..++.+++.+|++.+|++||++.||++.|.+
T Consensus 243 ~~~~-----~~~~~~~~~---------~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~ 298 (307)
T cd05098 243 YPGV-----PVEELFKLL---------KEGHRM----------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 298 (307)
T ss_pred CCcC-----CHHHHHHHH---------HcCCCC----------CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHH
Confidence 8532 112211111 000000 0011233567899999999999999999999999999
Q ss_pred HHHhhhcC
Q 047768 1000 ARQNFLGQ 1007 (1009)
Q Consensus 1000 i~~~~~~~ 1007 (1009)
+.+....+
T Consensus 299 ~~~~~~~~ 306 (307)
T cd05098 299 ILALTSNQ 306 (307)
T ss_pred HHHHhhcC
Confidence 88765443
No 184
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.7e-34 Score=315.58 Aligned_cols=268 Identities=21% Similarity=0.318 Sum_probs=207.9
Q ss_pred HhccCccCCcccccCCceEEEEEEec----CCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccC
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLHE----NGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFK 773 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 773 (1009)
..++|.+.+.||+|+||.||+|.+.. .+..||+|++..... .....+.+|+.++++++|+||+++++++...
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--- 80 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIED--- 80 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC---
Confidence 34688899999999999999999875 268899998864322 2345688999999999999999999987542
Q ss_pred CCceEEEEEeccCCCCHHHHHhccCCCC--CccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCce
Q 047768 774 GVDFKALVYEYMQNGSLEEWLHQRDDQL--GICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 851 (1009)
Q Consensus 774 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~ 851 (1009)
....++++||+++|+|.+++....... ....+++.+++.++.|++.|++|||+. +++||||||+||++++++.+
T Consensus 81 -~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~ 156 (280)
T cd05043 81 -GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQV 156 (280)
T ss_pred -CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcE
Confidence 356789999999999999997643210 113589999999999999999999998 99999999999999999999
Q ss_pred EEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccH
Q 047768 852 HVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTL 930 (1009)
Q Consensus 852 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~ 930 (1009)
|++|||+++.+...... .......++..|+|||++.+..++.++|||||||++||+++ |+.||.....
T Consensus 157 kl~d~g~~~~~~~~~~~------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----- 225 (280)
T cd05043 157 KITDNALSRDLFPMDYH------CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP----- 225 (280)
T ss_pred EECCCCCcccccCCceE------EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH-----
Confidence 99999999866443211 01112345778999999999999999999999999999999 9999864311
Q ss_pred HHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 047768 931 HEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQN 1003 (1009)
Q Consensus 931 ~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~~ 1003 (1009)
..+... +...... .....++.++.+++.+||+.||++|||+.|+++.|+.+.++
T Consensus 226 ~~~~~~---------~~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 226 FEMAAY---------LKDGYRL----------AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred HHHHHH---------HHcCCCC----------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 111110 0000000 00112345688999999999999999999999999988764
No 185
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.5e-34 Score=327.30 Aligned_cols=208 Identities=21% Similarity=0.306 Sum_probs=176.7
Q ss_pred HHHHHHHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhcCCCCcceEEeeeec
Q 047768 693 YKELSKATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSIRHRNLIKIVTICSS 769 (1009)
Q Consensus 693 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 769 (1009)
..+.....++|++.+.||+|+||.||+|+++.+++.||+|+++... ......+.+|+.+++.++||||+++++++..
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 4445556689999999999999999999999999999999986432 2223567889999999999999999988654
Q ss_pred cccCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCC
Q 047768 770 IDFKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDM 849 (1009)
Q Consensus 770 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~ 849 (1009)
....++||||+++|+|.+++.... +++..+..++.|++.||.|||++ +|+||||||+||+++.++
T Consensus 115 -----~~~~~lv~Ey~~gg~L~~~~~~~~-------~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~ 179 (371)
T cd05622 115 -----DRYLYMVMEYMPGGDLVNLMSNYD-------VPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSG 179 (371)
T ss_pred -----CCEEEEEEcCCCCCcHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCC
Confidence 377899999999999999997643 78888999999999999999999 999999999999999999
Q ss_pred ceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCC----CCCCcccchHHHHHHHHHHhCCCCCcc
Q 047768 850 VAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG----EASMRGGVYSYGILLLEIFTRRRPTES 922 (1009)
Q Consensus 850 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwS~Gvvl~elltg~~p~~~ 922 (1009)
.+||+|||+++....... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||..
T Consensus 180 ~ikL~DfG~a~~~~~~~~-------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 249 (371)
T cd05622 180 HLKLADFGTCMKMNKEGM-------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (371)
T ss_pred CEEEEeCCceeEcCcCCc-------ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCC
Confidence 999999999987643211 112245799999999998754 378999999999999999999999974
No 186
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.3e-34 Score=314.17 Aligned_cols=250 Identities=24% Similarity=0.309 Sum_probs=196.5
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
++|++.+.||+|+||.||+|.+..+++.||+|++..... .....+.+|++++++++||||+++++++... ...+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 75 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVE-----NRIS 75 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEEC-----CEEE
Confidence 367888999999999999999988999999999865422 2245788999999999999999999987653 6778
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+|+||+++++|..+. .+++..+..++.|++.|+.|||+. +|+|+||||+||+++.++.+||+|||++
T Consensus 76 lv~e~~~~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~ 142 (279)
T cd06619 76 ICTEFMDGGSLDVYR----------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVS 142 (279)
T ss_pred EEEecCCCCChHHhh----------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcc
Confidence 999999999997652 267888999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccH--HHHHHHh
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTL--HEFAKRA 937 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~--~~~~~~~ 937 (1009)
...... ......||..|+|||++.+..++.++||||||+++|||++|+.||.......... ......
T Consensus 143 ~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~- 211 (279)
T cd06619 143 TQLVNS----------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQC- 211 (279)
T ss_pred eecccc----------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHH-
Confidence 765322 1223568999999999999999999999999999999999999997533221110 111100
Q ss_pred ccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 938 LPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 938 ~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
+.+......+ ......++.+++.+|++.+|++||++.|+++.
T Consensus 212 -------~~~~~~~~~~----------~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 212 -------IVDEDPPVLP----------VGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred -------HhccCCCCCC----------CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0000000000 01122357899999999999999999999865
No 187
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=3e-34 Score=314.19 Aligned_cols=270 Identities=23% Similarity=0.366 Sum_probs=202.9
Q ss_pred ccCccCCcccccCCceEEEEEEe----cCCeEEEEEEeeccc-ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCC
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLH----ENGMLVAVKVINLEQ-KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 775 (1009)
+.|++.+.||+|+||.||.|++. .++..||+|.++... ....+.+.+|++++++++|||++++++++... +.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~ 80 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED---GG 80 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC---CC
Confidence 35788899999999999999853 467899999986443 22346789999999999999999999987542 23
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
...++||||+++++|.+++.+... .+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|
T Consensus 81 ~~~~lv~e~~~g~~L~~~l~~~~~-----~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~d 152 (284)
T cd05079 81 NGIKLIMEFLPSGSLKEYLPRNKN-----KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGD 152 (284)
T ss_pred CceEEEEEccCCCCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECC
Confidence 567899999999999999976532 389999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 935 (1009)
||+++........ ........++..|+|||++.+..++.++|||||||++|||+|++.|+...... ..+...
T Consensus 153 fg~~~~~~~~~~~-----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~---~~~~~~ 224 (284)
T cd05079 153 FGLTKAIETDKEY-----YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTL---FLKMIG 224 (284)
T ss_pred CccccccccCccc-----eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccch---hhhhcc
Confidence 9999876432210 01112345677899999999889999999999999999999988765421110 000000
Q ss_pred Hhc----cchhhhcc-CCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 047768 936 RAL----PEKVMEIV-DPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHA 1000 (1009)
Q Consensus 936 ~~~----~~~~~~~~-d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i 1000 (1009)
... .......+ +.... .....+...+.+++.+|++.+|++||++.++++.++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 225 PTHGQMTVTRLVRVLEEGKRL-----------PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred cccccccHHHHHHHHHcCccC-----------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 000 00000000 00000 01112445789999999999999999999999999876
No 188
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.4e-34 Score=329.14 Aligned_cols=275 Identities=20% Similarity=0.219 Sum_probs=199.2
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc--ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ--KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
+|++.+.||+|+||+||+|.+..+++.||||++.... ....+.+.+|+++++.++|+||+++++++...........+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4788899999999999999998899999999985432 22346788999999999999999999987654322223689
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+|+||+. ++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 81 lv~e~~~-~~l~~~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a 150 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQ------PLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLA 150 (372)
T ss_pred EEeeccc-cCHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccce
Confidence 9999996 68888886543 389999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
+....... .......+|+.|+|||++.+. .++.++||||+||++|||++|+.||....... ..........
T Consensus 151 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~g 222 (372)
T cd07853 151 RVEEPDES-------KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ-QLDLITDLLG 222 (372)
T ss_pred eecccCcc-------ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcC
Confidence 86543211 112234578999999998774 47899999999999999999999997432210 1111111000
Q ss_pred c----------chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 939 P----------EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 939 ~----------~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
. +.....+.......+. .... .....+..+++.+++.+|++.||++|||+.|+++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 223 TPSLEAMRSACEGARAHILRGPHKPPS-LPVL-YTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred CCCHHHHHHhhHHHHHHHHhCCCCCCc-hHHh-cccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 0 0000001000000000 0000 00011123467899999999999999999999864
No 189
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=4.3e-34 Score=309.14 Aligned_cols=256 Identities=25% Similarity=0.397 Sum_probs=194.0
Q ss_pred CcccccCCceEEEEEEec---CCeEEEEEEeeccc-ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEE
Q 047768 707 NTIGRGSFGFVYKGVLHE---NGMLVAVKVINLEQ-KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVY 782 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 782 (1009)
+.||+|+||.||+|.+.. .+..||+|.+.... ....+.+.+|+.+++.++|||++++++++... ....++|+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----~~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPS----EGSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecC----CCCcEEEE
Confidence 468999999999998753 34679999885322 22346788999999999999999999987532 24578999
Q ss_pred eccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccccc
Q 047768 783 EYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 862 (1009)
Q Consensus 783 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~ 862 (1009)
||+.+|+|.+++..... ..++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||+++..
T Consensus 77 e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~ 148 (262)
T cd05058 77 PYMKHGDLRNFIRSETH-----NPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDI 148 (262)
T ss_pred ecCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccc
Confidence 99999999999976543 267788899999999999999998 9999999999999999999999999999865
Q ss_pred CCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhC-CCCCcccccCCccHHHHHHHhccch
Q 047768 863 SASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTR-RRPTESMFNEGLTLHEFAKRALPEK 941 (1009)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~ 941 (1009)
....... ........++..|+|||++.+..++.++|||||||++|||++| ..||.... ........
T Consensus 149 ~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~-----~~~~~~~~---- 215 (262)
T cd05058 149 YDKEYYS----VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD-----SFDITVYL---- 215 (262)
T ss_pred cCCccee----ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHH----
Confidence 4321100 0111234467789999999888999999999999999999995 55554321 11111111
Q ss_pred hhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 047768 942 VMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQ 1002 (1009)
Q Consensus 942 ~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~ 1002 (1009)
........ ....+..+.+++.+||+.+|++||++.|+++.++++..
T Consensus 216 ----~~~~~~~~-----------~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 216 ----LQGRRLLQ-----------PEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred ----hcCCCCCC-----------CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 00000000 01123468899999999999999999999999998764
No 190
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.2e-34 Score=319.37 Aligned_cols=267 Identities=22% Similarity=0.382 Sum_probs=200.2
Q ss_pred ccCccCCcccccCCceEEEEEEec----------------CCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHE----------------NGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKI 763 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~----------------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l 763 (1009)
++|++.++||+|+||.||+|.+.. ++..||+|+++.... .....+.+|++++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 468999999999999999986532 345799999865432 234678999999999999999999
Q ss_pred EeeeeccccCCCceEEEEEeccCCCCHHHHHhccCCCC-----CccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCC
Q 047768 764 VTICSSIDFKGVDFKALVYEYMQNGSLEEWLHQRDDQL-----GICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDL 838 (1009)
Q Consensus 764 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdl 838 (1009)
++++... +..++||||+++|+|.+++....... ....+++.++..++.|++.|++|||+. +++||||
T Consensus 85 ~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl 156 (296)
T cd05095 85 LAVCITS-----DPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDL 156 (296)
T ss_pred EEEEecC-----CccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccC
Confidence 9987543 56799999999999999997654221 113478889999999999999999999 9999999
Q ss_pred CCCceeeCCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh--C
Q 047768 839 KPSNVLLDHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT--R 916 (1009)
Q Consensus 839 k~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt--g 916 (1009)
||+||+++.++.+|++|||+++.+...... .......++..|+|||...++.++.++|||||||++|||++ |
T Consensus 157 kp~Nili~~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~ 230 (296)
T cd05095 157 ATRNCLVGKNYTIKIADFGMSRNLYSGDYY------RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCK 230 (296)
T ss_pred ChheEEEcCCCCEEeccCcccccccCCcce------eccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCC
Confidence 999999999999999999999865432211 11112334678999999888899999999999999999998 6
Q ss_pred CCCCcccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 917 RRPTESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 917 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
..||...... +...... +...........+ ....++..+.+++.+||+.||++||++.||.+.
T Consensus 231 ~~p~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~-----------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 293 (296)
T cd05095 231 EQPYSQLSDE-----QVIENTG-EFFRDQGRQVYLP-----------KPALCPDSLYKLMLSCWRRNAKERPSFQEIHAT 293 (296)
T ss_pred CCCccccChH-----HHHHHHH-HHHhhccccccCC-----------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 7787643221 1111100 0000000000000 011234578899999999999999999999998
Q ss_pred HH
Q 047768 997 LC 998 (1009)
Q Consensus 997 L~ 998 (1009)
|+
T Consensus 294 l~ 295 (296)
T cd05095 294 LL 295 (296)
T ss_pred Hh
Confidence 86
No 191
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.8e-34 Score=321.88 Aligned_cols=244 Identities=22% Similarity=0.306 Sum_probs=190.1
Q ss_pred CcccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCCCceEEEEE
Q 047768 707 NTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKGVDFKALVY 782 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 782 (1009)
+.||+|+||+||+|+.+.+++.||||+++.... ...+.+.+|+.++.++ +||+|+++++++.. ....++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-----~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQT-----TSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEe-----CCEEEEEE
Confidence 469999999999999998999999999975422 2235678899999888 69999999998654 36789999
Q ss_pred eccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccccc
Q 047768 783 EYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 862 (1009)
Q Consensus 783 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~ 862 (1009)
||+++|+|.+++.... .+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~ 146 (327)
T cd05617 76 EYVNGGDLMFHMQRQR------KLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEG 146 (327)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceec
Confidence 9999999999887654 389999999999999999999999 9999999999999999999999999998753
Q ss_pred CCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccC-CccHHHHHHHhccch
Q 047768 863 SASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNE-GLTLHEFAKRALPEK 941 (1009)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~ 941 (1009)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..............
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~- 217 (327)
T cd05617 147 LGPG--------DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE- 217 (327)
T ss_pred cCCC--------CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh-
Confidence 2211 1223457899999999999999999999999999999999999999643221 11111111111100
Q ss_pred hhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHH
Q 047768 942 VMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMT 991 (1009)
Q Consensus 942 ~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~ 991 (1009)
... ..+ ......+.+++.+|++.||++|++++
T Consensus 218 ------~~~-~~p-----------~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 218 ------KPI-RIP-----------RFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred ------CCC-CCC-----------CCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 000 000 01123467899999999999999864
No 192
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.3e-34 Score=317.54 Aligned_cols=260 Identities=24% Similarity=0.388 Sum_probs=201.8
Q ss_pred hccCccCCcccccCCceEEEEEEe-----cCCeEEEEEEeecccc-cchHHHHHHHHHHHhc-CCCCcceEEeeeecccc
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLH-----ENGMLVAVKVINLEQK-GGSKSFAAECEALRSI-RHRNLIKIVTICSSIDF 772 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 772 (1009)
.++|.+.+.||+|+||.||+|.+. .++..||||+++.... ...+.+.+|+++++++ +||||+++++++...
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-- 111 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIG-- 111 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC--
Confidence 457899999999999999999863 3456899999864432 2245788999999999 799999999987643
Q ss_pred CCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceE
Q 047768 773 KGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 852 (1009)
Q Consensus 773 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~k 852 (1009)
+..++||||+++|+|.++++.... ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+|
T Consensus 112 ---~~~~lv~e~~~~~~L~~~i~~~~~----~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~ 181 (302)
T cd05055 112 ---GPILVITEYCCYGDLLNFLRRKRE----SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVK 181 (302)
T ss_pred ---CceEEEEEcCCCCcHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEE
Confidence 568999999999999999976432 1389999999999999999999999 999999999999999999999
Q ss_pred EeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHH
Q 047768 853 VSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLH 931 (1009)
Q Consensus 853 l~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~ 931 (1009)
++|||+++........ .......++..|+|||++.+..++.++||||+||++|||++ |+.||...... .
T Consensus 182 l~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~----~ 251 (302)
T cd05055 182 ICDFGLARDIMNDSNY------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD----S 251 (302)
T ss_pred ECCCcccccccCCCce------eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch----H
Confidence 9999999865432100 01112345788999999999999999999999999999998 99998643211 0
Q ss_pred HHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 047768 932 EFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHA 1000 (1009)
Q Consensus 932 ~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i 1000 (1009)
.. ...++....... ......++.+++.+|+..+|++|||+.|+++.|++.
T Consensus 252 ~~---------~~~~~~~~~~~~----------~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 252 KF---------YKLIKEGYRMAQ----------PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HH---------HHHHHcCCcCCC----------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 11 011111000000 001124578999999999999999999999999864
No 193
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=2.9e-34 Score=314.54 Aligned_cols=275 Identities=27% Similarity=0.396 Sum_probs=207.4
Q ss_pred ccCccCCcccccCCceEEEEEEec----CCeEEEEEEeeccccc-chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCC
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHE----NGMLVAVKVINLEQKG-GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 775 (1009)
++|.+.+.||+|+||.||+|++.. +++.||||+++..... ..+.+.+|++++++++|+||+++++++... +.
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~---~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKP---GG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecC---CC
Confidence 467778999999999999999753 4789999999755432 356899999999999999999999987542 34
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
...++||||+++++|.+++..... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|++|
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~~-----~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~d 152 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHRD-----QINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISD 152 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCcc-----ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcc
Confidence 578999999999999999987653 389999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 935 (1009)
||.+.......... .......++..|+|||...+..++.++||||||+++|||++|+.|+...............
T Consensus 153 fg~~~~~~~~~~~~-----~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~ 227 (284)
T cd05038 153 FGLAKVLPEDKDYY-----YVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQ 227 (284)
T ss_pred cccccccccCCcce-----eccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcccccccc
Confidence 99998765321100 1111234566799999999889999999999999999999999997643221111000000
Q ss_pred -HhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 047768 936 -RALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHAR 1001 (1009)
Q Consensus 936 -~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~ 1001 (1009)
......+.+.+..... ......++.++.+++.+|++.+|++||||.||+++|+.++
T Consensus 228 ~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 228 GQMIVTRLLELLKEGER----------LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred ccccHHHHHHHHHcCCc----------CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 0000011111111110 0111234467899999999999999999999999998763
No 194
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=3.1e-34 Score=313.24 Aligned_cols=260 Identities=27% Similarity=0.437 Sum_probs=201.5
Q ss_pred ccCccCCcccccCCceEEEEEEe-----cCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCC
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLH-----ENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 775 (1009)
++|...++||+|+||.||+|... .++..||+|.+..........+.+|++++++++|+||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 79 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEG----- 79 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecC-----
Confidence 46778899999999999999753 34678999988654444456899999999999999999999986543
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCC---------CCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeC
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQ---------LGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLD 846 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~---------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~ 846 (1009)
...++|+||+++++|.+++...... .....+++..+..++.|++.|++|||+. +++||||||+||+++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~ 156 (280)
T cd05092 80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVG 156 (280)
T ss_pred CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEc
Confidence 5679999999999999999765421 1113488999999999999999999998 999999999999999
Q ss_pred CCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCccccc
Q 047768 847 HDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFN 925 (1009)
Q Consensus 847 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~ 925 (1009)
+++.+||+|||+++........ .......+++.|+|||+..+..++.++|||||||++|||++ |+.||.....
T Consensus 157 ~~~~~kL~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 230 (280)
T cd05092 157 QGLVVKIGDFGMSRDIYSTDYY------RVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN 230 (280)
T ss_pred CCCCEEECCCCceeEcCCCcee------ecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH
Confidence 9999999999999765432110 11112345788999999999999999999999999999999 8999864321
Q ss_pred CCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 047768 926 EGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLC 998 (1009)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~ 998 (1009)
. ..... .....-.. ....++..+.+++.+||+.||.+||++.||.+.|+
T Consensus 231 ~-----~~~~~--------~~~~~~~~-----------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 231 T-----EAIEC--------ITQGRELE-----------RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred H-----HHHHH--------HHcCccCC-----------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 1 11100 00000000 00123456789999999999999999999999886
No 195
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=2.7e-34 Score=309.34 Aligned_cols=251 Identities=20% Similarity=0.270 Sum_probs=200.4
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc-ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ-KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
+|++.+.||+|+||.||++++..+++.||+|.++... ....+.+.+|+.++++++|+|++++.+++.. ....++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 75 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEA-----DGHLYI 75 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEE-----CCEEEE
Confidence 4778899999999999999999899999999986433 2234678889999999999999999998654 368899
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
|+||+++|+|.+++..... ..+++..++.++.|++.|+.|||+. +|+|+||||+||++++++.++++|||.++
T Consensus 76 v~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~ 148 (255)
T cd08219 76 VMEYCDGGDLMQKIKLQRG----KLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSAR 148 (255)
T ss_pred EEeeCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcce
Confidence 9999999999999875432 1378899999999999999999999 99999999999999999999999999997
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccc
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPE 940 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 940 (1009)
...... .......|++.|+|||++.+..++.++||||||+++|+|++|+.||.... ...........
T Consensus 149 ~~~~~~--------~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~-----~~~~~~~~~~~ 215 (255)
T cd08219 149 LLTSPG--------AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS-----WKNLILKVCQG 215 (255)
T ss_pred eecccc--------cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCC-----HHHHHHHHhcC
Confidence 654321 11223568899999999999899999999999999999999999996421 11111111000
Q ss_pred hhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 941 KVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 941 ~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
.....+ ......+.+++.+||+.||++||++.|++..
T Consensus 216 --------~~~~~~-----------~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 216 --------SYKPLP-----------SHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred --------CCCCCC-----------cccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 000000 1123357799999999999999999999864
No 196
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.7e-34 Score=313.49 Aligned_cols=261 Identities=23% Similarity=0.398 Sum_probs=202.4
Q ss_pred hccCccCCcccccCCceEEEEEEecC-----CeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccC
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHEN-----GMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFK 773 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 773 (1009)
.++|.+.+.||+|+||.||+|.++.. +..||+|.+..... .....+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--- 81 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTG--- 81 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC---
Confidence 45788899999999999999998643 37899999854432 2245788999999999999999999986543
Q ss_pred CCceEEEEEeccCCCCHHHHHhccCCCC----CccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCC
Q 047768 774 GVDFKALVYEYMQNGSLEEWLHQRDDQL----GICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDM 849 (1009)
Q Consensus 774 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~ 849 (1009)
...++||||+++|+|.+++....... ....+++..+..++.|++.|+.|||+. +|+||||||+||+++.++
T Consensus 82 --~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~ 156 (277)
T cd05032 82 --QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDL 156 (277)
T ss_pred --CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCC
Confidence 67899999999999999997643211 112478889999999999999999998 999999999999999999
Q ss_pred ceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCc
Q 047768 850 VAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGL 928 (1009)
Q Consensus 850 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~ 928 (1009)
.+||+|||+++........ .......++..|+|||.+.++.++.++|||||||++||+++ |+.||.....
T Consensus 157 ~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--- 227 (277)
T cd05032 157 TVKIGDFGMTRDIYETDYY------RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN--- 227 (277)
T ss_pred CEEECCcccchhhccCccc------ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH---
Confidence 9999999999866443211 11122346789999999998899999999999999999998 8999864221
Q ss_pred cHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 047768 929 TLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLC 998 (1009)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~ 998 (1009)
....... .+......+ ..+..++.+++.+|++.+|++|||+.|+++.|+
T Consensus 228 --~~~~~~~--------~~~~~~~~~-----------~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 228 --EEVLKFV--------IDGGHLDLP-----------ENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred --HHHHHHH--------hcCCCCCCC-----------CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 1111110 011000111 122456889999999999999999999999875
No 197
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=8.8e-35 Score=324.44 Aligned_cols=242 Identities=25% Similarity=0.262 Sum_probs=187.4
Q ss_pred CcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHH-HHHhcCCCCcceEEeeeeccccCCCceEEEEE
Q 047768 707 NTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECE-ALRSIRHRNLIKIVTICSSIDFKGVDFKALVY 782 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 782 (1009)
+.||+|+||+||+|+++.+++.||+|++.... ......+..|.. +++.++||||+++++++.. .+..++||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~-----~~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT-----ADKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEc-----CCeEEEEE
Confidence 46999999999999999899999999996432 112234444444 5677899999999988654 36789999
Q ss_pred eccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccccc
Q 047768 783 EYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 862 (1009)
Q Consensus 783 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~ 862 (1009)
||+++|+|.+++..... +++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~~~~~~~------~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~ 146 (325)
T cd05602 76 DYINGGELFYHLQRERC------FLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 146 (325)
T ss_pred eCCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCccc
Confidence 99999999999976542 77888899999999999999999 9999999999999999999999999999754
Q ss_pred CCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchh
Q 047768 863 SASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKV 942 (1009)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 942 (1009)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .+.......
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i~~--- 210 (325)
T cd05602 147 IEHN--------GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-----AEMYDNILN--- 210 (325)
T ss_pred ccCC--------CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH-----HHHHHHHHh---
Confidence 3211 122345689999999999999999999999999999999999999974321 111111110
Q ss_pred hhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 943 MEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 943 ~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
...... ......+.+++.+|++.||.+||++.+.+.
T Consensus 211 -----~~~~~~------------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 211 -----KPLQLK------------PNITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred -----CCcCCC------------CCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 000000 012235678999999999999999875443
No 198
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=3e-34 Score=314.76 Aligned_cols=264 Identities=22% Similarity=0.363 Sum_probs=202.1
Q ss_pred HhccCccCCcccccCCceEEEEEEec-----CCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeecccc
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLHE-----NGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDF 772 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 772 (1009)
..++|++.+.||+|+||.||+|..+. .+..||+|.++.... .....+.+|+.++++++||||+++++++...
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-- 81 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG-- 81 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC--
Confidence 45689999999999999999997652 356899998854332 1234678899999999999999999986543
Q ss_pred CCCceEEEEEeccCCCCHHHHHhccCCC----CCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCC
Q 047768 773 KGVDFKALVYEYMQNGSLEEWLHQRDDQ----LGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHD 848 (1009)
Q Consensus 773 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~----~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~ 848 (1009)
...++||||+++|+|.+++...... .+....++..+..++.|++.|++|||++ +|+||||||+||+++++
T Consensus 82 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~ 155 (288)
T cd05061 82 ---QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHD 155 (288)
T ss_pred ---CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCC
Confidence 5679999999999999999764321 1123467788899999999999999999 99999999999999999
Q ss_pred CceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCC
Q 047768 849 MVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEG 927 (1009)
Q Consensus 849 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~ 927 (1009)
+.+|++|||+++........ .......++..|+|||.+.++.++.++|||||||++|||++ |+.||.....
T Consensus 156 ~~~~L~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~-- 227 (288)
T cd05061 156 FTVKIGDFGMTRDIYETDYY------RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-- 227 (288)
T ss_pred CcEEECcCCccccccccccc------cccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence 99999999999865432210 11111235678999999999999999999999999999999 7888864221
Q ss_pred ccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 047768 928 LTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHA 1000 (1009)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i 1000 (1009)
.+..... .+......+ ..+...+.+++.+|++.||++|||+.|+++.+.+.
T Consensus 228 ---~~~~~~~--------~~~~~~~~~-----------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 228 ---EQVLKFV--------MDGGYLDQP-----------DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred ---HHHHHHH--------HcCCCCCCC-----------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 1111111 111111111 12235688999999999999999999999988864
No 199
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.9e-34 Score=316.31 Aligned_cols=268 Identities=22% Similarity=0.285 Sum_probs=205.8
Q ss_pred HHHHHHHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhc-CCCCcceEEeeeeccc
Q 047768 693 YKELSKATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSI-RHRNLIKIVTICSSID 771 (1009)
Q Consensus 693 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 771 (1009)
++++....++|++.+.||+|+||.||+|.++.+++.||+|+++... .....+.+|+.+++++ +||||+++++++....
T Consensus 10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 88 (286)
T cd06638 10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD 88 (286)
T ss_pred eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence 3445566789999999999999999999999899999999875422 2346788899999999 6999999999886544
Q ss_pred cCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCce
Q 047768 772 FKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 851 (1009)
Q Consensus 772 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~ 851 (1009)
.......++||||+++++|.+++...... ...+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~ 163 (286)
T cd06638 89 VKNGDQLWLVLELCNGGSVTDLVKGFLKR--GERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGV 163 (286)
T ss_pred cCCCCeEEEEEeecCCCCHHHHHHHhhcc--CccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCE
Confidence 45557789999999999999988643211 12478899999999999999999998 99999999999999999999
Q ss_pred EEeccccccccCCCCCCCccccCCccccccccccccCccccCC-----CCCCCcccchHHHHHHHHHHhCCCCCcccccC
Q 047768 852 HVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-----GEASMRGGVYSYGILLLEIFTRRRPTESMFNE 926 (1009)
Q Consensus 852 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~ 926 (1009)
|++|||+++...... .......|++.|+|||++.. ..++.++||||+||++|||++|+.||......
T Consensus 164 kl~dfg~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~ 235 (286)
T cd06638 164 KLVDFGVSAQLTSTR--------LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM 235 (286)
T ss_pred EEccCCceeecccCC--------CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh
Confidence 999999998664321 11123468999999998753 45788999999999999999999998643211
Q ss_pred CccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 927 GLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
..... .. ....... .....+..++.+++.+|++.||++|||+.|+++.
T Consensus 236 ----~~~~~--~~----~~~~~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 236 ----RALFK--IP----RNPPPTL------------HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred ----HHHhh--cc----ccCCCcc------------cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 11100 00 0000000 0001123457899999999999999999999875
No 200
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=7e-35 Score=325.23 Aligned_cols=242 Identities=24% Similarity=0.263 Sum_probs=188.2
Q ss_pred CcccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHH-HHHhcCCCCcceEEeeeeccccCCCceEEEEE
Q 047768 707 NTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECE-ALRSIRHRNLIKIVTICSSIDFKGVDFKALVY 782 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 782 (1009)
+.||+|+||+||+|+.+.+|+.||||++..... .....+..|.. +++.++||||+++++++.. .+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~-----~~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT-----TEKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEec-----CCEEEEEE
Confidence 469999999999999998999999999964421 22344555555 4677899999999988654 36789999
Q ss_pred eccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccccc
Q 047768 783 EYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 862 (1009)
Q Consensus 783 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~ 862 (1009)
||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~ 146 (325)
T cd05604 76 DFVNGGELFFHLQRER------SFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (325)
T ss_pred cCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccC
Confidence 9999999999887654 388999999999999999999999 9999999999999999999999999998753
Q ss_pred CCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchh
Q 047768 863 SASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKV 942 (1009)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 942 (1009)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+.......
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~-----~~~~~~~~~~--- 210 (325)
T cd05604 147 IAQS--------DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD-----VAEMYDNILH--- 210 (325)
T ss_pred CCCC--------CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC-----HHHHHHHHHc---
Confidence 2211 12234568999999999999999999999999999999999999996432 1122111111
Q ss_pred hhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 943 MEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 943 ~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
..+...+ .....+.+++.+|++.+|.+||++.+.++
T Consensus 211 -----~~~~~~~------------~~~~~~~~ll~~ll~~~p~~R~~~~~~~~ 246 (325)
T cd05604 211 -----KPLVLRP------------GASLTAWSILEELLEKDRQRRLGAKEDFL 246 (325)
T ss_pred -----CCccCCC------------CCCHHHHHHHHHHhccCHHhcCCCCCCHH
Confidence 1110000 11234678999999999999999864433
No 201
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=4.5e-34 Score=319.31 Aligned_cols=202 Identities=26% Similarity=0.346 Sum_probs=172.0
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
++|.+.+.||+|+||+||+|+.+.+++.||||+++... ....+.+.+|+.++..++|+||+++++++.. ...
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQD-----ENN 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEec-----CCe
Confidence 46889999999999999999999899999999996422 2234568889999999999999999998654 378
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++||||+++|+|.+++.+... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg 147 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSKFED-----RLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFG 147 (331)
T ss_pred EEEEEecCCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECC
Confidence 8999999999999999976433 388999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCC-----CCCCCcccchHHHHHHHHHHhCCCCCcc
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-----GEASMRGGVYSYGILLLEIFTRRRPTES 922 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwS~Gvvl~elltg~~p~~~ 922 (1009)
++........ .......||+.|+|||++.. ..++.++||||+||++|||++|+.||..
T Consensus 148 ~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 148 SCLRLLADGT-------VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred ceeecCCCCC-------ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence 9976543211 11122468999999999863 4578899999999999999999999964
No 202
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.5e-34 Score=338.23 Aligned_cols=274 Identities=19% Similarity=0.253 Sum_probs=195.7
Q ss_pred HHHHHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCC------CcceEEeeee
Q 047768 695 ELSKATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHR------NLIKIVTICS 768 (1009)
Q Consensus 695 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~~~~~ 768 (1009)
++....++|.+.+.||+|+||+||+|.+..+++.||||+++... ...+....|+++++.++|. +++++++++.
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 33445678999999999999999999998889999999986432 2234566788888877554 5788888764
Q ss_pred ccccCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCC
Q 047768 769 SIDFKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHD 848 (1009)
Q Consensus 769 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~ 848 (1009)
. .....++|||++ +++|.+++.+.. .+++..+..|+.|++.||+|||+++ +||||||||+|||++.+
T Consensus 202 ~----~~~~~~iv~~~~-g~~l~~~l~~~~------~l~~~~~~~i~~qi~~aL~yLH~~~--gIiHrDlKP~NILl~~~ 268 (467)
T PTZ00284 202 N----ETGHMCIVMPKY-GPCLLDWIMKHG------PFSHRHLAQIIFQTGVALDYFHTEL--HLMHTDLKPENILMETS 268 (467)
T ss_pred c----CCceEEEEEecc-CCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhcC--CeecCCCCHHHEEEecC
Confidence 3 235789999988 789999887654 3899999999999999999999732 89999999999999876
Q ss_pred C----------------ceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHH
Q 047768 849 M----------------VAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLE 912 (1009)
Q Consensus 849 ~----------------~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~e 912 (1009)
+ .+||+|||.+..... ......||+.|+|||++.+..++.++|||||||++||
T Consensus 269 ~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~-----------~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~e 337 (467)
T PTZ00284 269 DTVVDPVTNRALPPDPCRVRICDLGGCCDERH-----------SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYE 337 (467)
T ss_pred CcccccccccccCCCCceEEECCCCccccCcc-----------ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHH
Confidence 5 499999998764321 1224678999999999999999999999999999999
Q ss_pred HHhCCCCCcccccCCccHHHHHHHh---ccchh---------hhccCC------CCCChhhhhhhc-cccccHHHHHHHH
Q 047768 913 IFTRRRPTESMFNEGLTLHEFAKRA---LPEKV---------MEIVDP------SLLPLEEERTNS-RRVRNEECLVAVI 973 (1009)
Q Consensus 913 lltg~~p~~~~~~~~~~~~~~~~~~---~~~~~---------~~~~d~------~l~~~~~~r~~~-~~~~~~~~~~~l~ 973 (1009)
|++|+.||...... ......... ++..+ .++++. ...+..-.+... ...........+.
T Consensus 338 lltG~~pf~~~~~~--~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (467)
T PTZ00284 338 LYTGKLLYDTHDNL--EHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLC 415 (467)
T ss_pred HHhCCCCCCCCChH--HHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHH
Confidence 99999999753221 111111111 11111 111111 000000000000 0000011124577
Q ss_pred HHHhhccCCCCCCCCCHHHHHH
Q 047768 974 KTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 974 ~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
+++.+|+++||++|||+.|+++
T Consensus 416 dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 416 DLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred HHHHHhCCcChhhCCCHHHHhc
Confidence 9999999999999999999986
No 203
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=4.8e-34 Score=310.16 Aligned_cols=258 Identities=23% Similarity=0.362 Sum_probs=202.8
Q ss_pred ccCccCCcccccCCceEEEEEEecC---CeEEEEEEeeccc-ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCc
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHEN---GMLVAVKVINLEQ-KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVD 776 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 776 (1009)
++|++.+.||+|+||.||+|.+... ...||||...... ....+.+.+|+.++++++||||+++++++.. .
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------~ 79 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE------N 79 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC------C
Confidence 4688889999999999999998643 3468999886544 2334678999999999999999999998753 3
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
..++||||+++|+|.+++..... .+++.++..++.+++.|++|||+. +++||||||+||+++.++.+|++||
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~ 151 (270)
T cd05056 80 PVWIVMELAPLGELRSYLQVNKY-----SLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDF 151 (270)
T ss_pred CcEEEEEcCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccC
Confidence 46899999999999999976543 389999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHH
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 935 (1009)
|+++....... .......++..|+|||.+....++.++||||||+++||+++ |+.||...... +...
T Consensus 152 g~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-----~~~~ 219 (270)
T cd05056 152 GLSRYLEDESY-------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN-----DVIG 219 (270)
T ss_pred ceeeecccccc-------eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH-----HHHH
Confidence 99986644311 11112234578999999988889999999999999999996 99998643221 1111
Q ss_pred HhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 047768 936 RALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQN 1003 (1009)
Q Consensus 936 ~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~~ 1003 (1009)
.. ....... ....++.++.+++.+|+..+|++|||+.|+++.|++++++
T Consensus 220 ~~--------~~~~~~~-----------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 220 RI--------ENGERLP-----------MPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred HH--------HcCCcCC-----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 00 0000000 0112345688999999999999999999999999998764
No 204
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=4.4e-35 Score=325.92 Aligned_cols=239 Identities=23% Similarity=0.290 Sum_probs=189.6
Q ss_pred CcccccCCceEEEEEEe---cCCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEE
Q 047768 707 NTIGRGSFGFVYKGVLH---ENGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALV 781 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 781 (1009)
+.||+|+||.||+++.. .+|+.||+|+++.... .....+.+|++++++++||||+++++++.. ....++|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~~~lv 76 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQT-----EGKLYLI 76 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEc-----CCEEEEE
Confidence 57999999999998863 5689999999975432 123457789999999999999999998654 3678999
Q ss_pred EeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccc
Q 047768 782 YEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 861 (1009)
Q Consensus 782 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~ 861 (1009)
|||+++|+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 77 ~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 147 (318)
T cd05582 77 LDFLRGGDLFTRLSKEV------MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKE 147 (318)
T ss_pred EcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcc
Confidence 99999999999997654 389999999999999999999999 999999999999999999999999999876
Q ss_pred cCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccch
Q 047768 862 LSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEK 941 (1009)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 941 (1009)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..........
T Consensus 148 ~~~~~--------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~-----~~~~~~i~~~- 213 (318)
T cd05582 148 SIDHE--------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR-----KETMTMILKA- 213 (318)
T ss_pred cCCCC--------CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH-----HHHHHHHHcC-
Confidence 53321 122245689999999999998999999999999999999999999964321 1111111110
Q ss_pred hhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 047768 942 VMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTD 992 (1009)
Q Consensus 942 ~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~e 992 (1009)
.. ..+ ......+.+++.+|++.||++||++.+
T Consensus 214 -------~~-~~p-----------~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 214 -------KL-GMP-----------QFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred -------CC-CCC-----------CCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 00 000 012235678999999999999999666
No 205
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=4.4e-34 Score=318.21 Aligned_cols=204 Identities=24% Similarity=0.323 Sum_probs=163.5
Q ss_pred CCcccccCCceEEEEEEe--cCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEe
Q 047768 706 SNTIGRGSFGFVYKGVLH--ENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYE 783 (1009)
Q Consensus 706 ~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 783 (1009)
.++||+|+||+||+|+.+ .+++.||+|+++.. .....+.+|++++++++||||+++++++... .....++|+|
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSH---ADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEecC---CCcEEEEEEe
Confidence 468999999999999975 36689999998543 2345678899999999999999999986532 2356889999
Q ss_pred ccCCCCHHHHHhccCCC---CCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceee----CCCCceEEecc
Q 047768 784 YMQNGSLEEWLHQRDDQ---LGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLL----DHDMVAHVSDF 856 (1009)
Q Consensus 784 ~~~~gsL~~~l~~~~~~---~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill----~~~~~~kl~Df 856 (1009)
|+. ++|.+++...... .....+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++.+||+||
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 81 YAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred ccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 985 5898887643211 1123488999999999999999999999 99999999999999 46679999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCccc
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESM 923 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~ 923 (1009)
|+++....... .........||+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 157 G~a~~~~~~~~-----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 157 GFARLFNSPLK-----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred CceeccCCCCc-----cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 99987643211 1112234678999999999877 45899999999999999999999999643
No 206
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.8e-34 Score=315.93 Aligned_cols=268 Identities=24% Similarity=0.370 Sum_probs=204.6
Q ss_pred hccCccCCcccccCCceEEEEEEe-------cCCeEEEEEEeecccc-cchHHHHHHHHHHHhc-CCCCcceEEeeeecc
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLH-------ENGMLVAVKVINLEQK-GGSKSFAAECEALRSI-RHRNLIKIVTICSSI 770 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 770 (1009)
.++|.+.+.||+|+||.||+|+.. .....||+|.++.... .....+.+|+++++++ +||||+++++++...
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 457889999999999999999863 2345799999864322 2235688899999999 699999999987543
Q ss_pred ccCCCceEEEEEeccCCCCHHHHHhccCCC----------CCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCC
Q 047768 771 DFKGVDFKALVYEYMQNGSLEEWLHQRDDQ----------LGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKP 840 (1009)
Q Consensus 771 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~ 840 (1009)
...++|+||+++|+|.+++...... .....+++.++..++.|++.|+.|||++ +|+||||||
T Consensus 91 -----~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp 162 (314)
T cd05099 91 -----GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAA 162 (314)
T ss_pred -----CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeeccccc
Confidence 5689999999999999999764321 0113488999999999999999999998 999999999
Q ss_pred CceeeCCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCC
Q 047768 841 SNVLLDHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRP 919 (1009)
Q Consensus 841 ~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p 919 (1009)
+||+++.++.+|++|||.++......... ......++..|+|||++.+..++.++|||||||++|||++ |+.|
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p 236 (314)
T cd05099 163 RNVLVTEDNVMKIADFGLARGVHDIDYYK------KTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSP 236 (314)
T ss_pred eeEEEcCCCcEEEcccccccccccccccc------ccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCC
Confidence 99999999999999999998664322110 0111234567999999999999999999999999999999 8888
Q ss_pred CcccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 047768 920 TESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCH 999 (1009)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~ 999 (1009)
|.... ............. .. ....+..++.+++.+|+..+|++||++.|+++.|++
T Consensus 237 ~~~~~-----~~~~~~~~~~~~~--------~~-----------~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~ 292 (314)
T cd05099 237 YPGIP-----VEELFKLLREGHR--------MD-----------KPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDK 292 (314)
T ss_pred CCCCC-----HHHHHHHHHcCCC--------CC-----------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 86432 1111111100000 00 011233467799999999999999999999999999
Q ss_pred HHHhhh
Q 047768 1000 ARQNFL 1005 (1009)
Q Consensus 1000 i~~~~~ 1005 (1009)
+.....
T Consensus 293 ~~~~~~ 298 (314)
T cd05099 293 VLAAVS 298 (314)
T ss_pred HHHHhc
Confidence 876543
No 207
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2.6e-34 Score=314.34 Aligned_cols=252 Identities=22% Similarity=0.316 Sum_probs=197.4
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALV 781 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 781 (1009)
.|++.+.||+|+||.||+|.+..++..+|+|.+........+.+.+|+++++.++|||++++++++... ...++|
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~-----~~~~~v 80 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE-----NNLWIL 80 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeC-----CEEEEE
Confidence 367788999999999999999988999999998654444456788999999999999999999987543 678999
Q ss_pred EeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccc
Q 047768 782 YEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 861 (1009)
Q Consensus 782 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~ 861 (1009)
+||+++++|.+++..... .+++..+..++.|++.||.|||+. +++||||||+||+++.++.+|++|||++..
T Consensus 81 ~e~~~~~~l~~~~~~~~~-----~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~ 152 (282)
T cd06643 81 IEFCAGGAVDAVMLELER-----PLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAK 152 (282)
T ss_pred EEecCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccccccc
Confidence 999999999998875432 389999999999999999999999 999999999999999999999999999875
Q ss_pred cCCCCCCCccccCCccccccccccccCccccC-----CCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHH
Q 047768 862 LSASPLGNVVETPSSSIGVKGTIGYVAPEYGL-----GGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKR 936 (1009)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 936 (1009)
..... .......|+..|+|||++. +..++.++|||||||++|||++|+.||...... +....
T Consensus 153 ~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-----~~~~~ 219 (282)
T cd06643 153 NTRTI--------QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM-----RVLLK 219 (282)
T ss_pred ccccc--------cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH-----HHHHH
Confidence 43211 1122346889999999874 455788999999999999999999998643211 11110
Q ss_pred hccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 937 ALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 937 ~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
..... .+.. . .+..+..++.+++.+||+.+|.+||++.++++.
T Consensus 220 ~~~~~-----~~~~-~-----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 220 IAKSE-----PPTL-A-----------QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred HhhcC-----CCCC-C-----------CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 0000 0 001223467899999999999999999998753
No 208
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=5e-34 Score=308.84 Aligned_cols=254 Identities=21% Similarity=0.291 Sum_probs=200.1
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc-----chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCC
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG-----GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 775 (1009)
+.|.+.+.||+|++|.||+|....+++.||+|.+...... ..+.+.+|++++++++||||+++++++...
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDD----- 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccC-----
Confidence 4688899999999999999999888999999998643211 235688899999999999999999997543
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
...++|+||+++++|.+++.... .+++..+..++.|++.|+.|||+. +|+||||+|+||++++++.++|+|
T Consensus 77 ~~~~~v~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~d 147 (263)
T cd06625 77 ETLSIFMEYMPGGSVKDQLKAYG------ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGD 147 (263)
T ss_pred CeEEEEEEECCCCcHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEee
Confidence 68899999999999999997654 378899999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 935 (1009)
||+++....... .........|+..|+|||++.+..++.++||||+|+++|||++|+.||..... ......
T Consensus 148 fg~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~ 218 (263)
T cd06625 148 FGASKRLQTICS-----SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA----MAAIFK 218 (263)
T ss_pred cccceecccccc-----ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch----HHHHHH
Confidence 999976543210 00111234578899999999999999999999999999999999999864311 111111
Q ss_pred HhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 936 RALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 936 ~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
...... ... .+......+.+++.+|+..+|.+|||+.|+++.
T Consensus 219 ~~~~~~--------~~~-----------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 219 IATQPT--------NPQ-----------LPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred HhccCC--------CCC-----------CCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 000000 000 011233457899999999999999999999864
No 209
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.7e-34 Score=316.35 Aligned_cols=251 Identities=21% Similarity=0.271 Sum_probs=201.7
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
..+|++.+.||+|+||.||+|....+++.||+|.+........+.+.+|+.+++.++|+|++++++++.. ....+
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~~ 92 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-----GDELW 92 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEec-----CCEEE
Confidence 3689999999999999999999988999999999976555556778899999999999999999998754 36789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+||||+++++|.+++.+.. +++.++..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||++
T Consensus 93 lv~e~~~~~~L~~~~~~~~-------~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~ 162 (297)
T cd06656 93 VVMEYLAGGSLTDVVTETC-------MDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 162 (297)
T ss_pred EeecccCCCCHHHHHHhCC-------CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccc
Confidence 9999999999999987532 78899999999999999999999 9999999999999999999999999998
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhcc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
....... .......+++.|+|||...+..++.++|||||||++|++++|+.||....... ..
T Consensus 163 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~----~~------ 224 (297)
T cd06656 163 AQITPEQ--------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR----AL------ 224 (297)
T ss_pred eEccCCc--------cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcch----he------
Confidence 7654321 11123457889999999999999999999999999999999999996422110 00
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
..... ...+ .. .........+.+++.+|++.+|++||++.++++
T Consensus 225 ---~~~~~---~~~~----~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 225 ---YLIAT---NGTP----EL--QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred ---eeecc---CCCC----CC--CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000 0000 00 001122345678999999999999999999987
No 210
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=3.7e-34 Score=309.18 Aligned_cols=254 Identities=24% Similarity=0.447 Sum_probs=200.8
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
.++|.+.++||+|+||.||+|..+ +++.||+|.+.... .....+.+|+.++++++|+|++++++++.. ...+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~ 76 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVTQ------EPIY 76 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEcc------CCcE
Confidence 457888999999999999999875 67889999986433 235678999999999999999999987532 4579
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+|+||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++||||||+||++++++.++++|||++
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~ 149 (260)
T cd05067 77 IITEYMENGSLVDFLKTPEG----IKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLA 149 (260)
T ss_pred EEEEcCCCCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcce
Confidence 99999999999999876432 2488999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
........ .......++..|+|||++....++.++||||||+++||+++ |+.||..... .+.....
T Consensus 150 ~~~~~~~~-------~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~- 216 (260)
T cd05067 150 RLIEDNEY-------TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN-----PEVIQNL- 216 (260)
T ss_pred eecCCCCc-------ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh-----HHHHHHH-
Confidence 76653211 11122345778999999999999999999999999999999 9999974321 1111110
Q ss_pred cchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 047768 939 PEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCH 999 (1009)
Q Consensus 939 ~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~ 999 (1009)
...... + .....+.++.+++.+|++.+|++||+++++...|+.
T Consensus 217 --------~~~~~~-~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 217 --------ERGYRM-P---------RPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred --------HcCCCC-C---------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 000000 0 001123468899999999999999999999998863
No 211
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=4.3e-34 Score=312.09 Aligned_cols=259 Identities=27% Similarity=0.427 Sum_probs=203.8
Q ss_pred ccCccCCcccccCCceEEEEEEecCCe----EEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCC
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGM----LVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 775 (1009)
.+|.+.+.||+|+||+||+|.++.+|. .||+|.++.... .....+.+|+.++++++|||+++++++|..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 80 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS------ 80 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec------
Confidence 578888999999999999999876554 689998764432 234578899999999999999999998753
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
...++|+||+++|+|.+++..... .+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|
T Consensus 81 ~~~~~v~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~d 152 (279)
T cd05057 81 SQVQLITQLMPLGCLLDYVRNHKD-----NIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITD 152 (279)
T ss_pred CceEEEEecCCCCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECC
Confidence 567899999999999999987543 289999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHH
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFA 934 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~ 934 (1009)
||.++........ .......++..|+|||......++.++||||||+++||+++ |+.||.... ..++.
T Consensus 153 fg~~~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----~~~~~ 221 (279)
T cd05057 153 FGLAKLLDVDEKE------YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIP-----AVEIP 221 (279)
T ss_pred CcccccccCcccc------eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCC-----HHHHH
Confidence 9999876532110 11112234678999999988899999999999999999999 999986432 11111
Q ss_pred HHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 047768 935 KRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQN 1003 (1009)
Q Consensus 935 ~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~~ 1003 (1009)
.... .......+ ..+...+.+++.+||..+|.+||++.++++.+.++.++
T Consensus 222 ~~~~--------~~~~~~~~-----------~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 222 DLLE--------KGERLPQP-----------PICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred HHHh--------CCCCCCCC-----------CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 1110 00000000 01223577999999999999999999999999987654
No 212
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.4e-34 Score=299.24 Aligned_cols=260 Identities=27% Similarity=0.318 Sum_probs=202.9
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCc
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVD 776 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 776 (1009)
.+.|...+.||+|.-|+||+++.+.++..+|+|++....- ....+.+.|.+||+.++||.+..+++.+ +...
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~f-----et~~ 150 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASF-----ETDK 150 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhee-----eccc
Confidence 3456777899999999999999998889999999965432 2235677899999999999999999974 4558
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
+.|+|||||+||+|...+++.... .+++..++-+|.+++-||+|||-. |||+|||||+||||.++|++-++||
T Consensus 151 ~~cl~meyCpGGdL~~LrqkQp~~----~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDF 223 (459)
T KOG0610|consen 151 YSCLVMEYCPGGDLHSLRQKQPGK----RFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDF 223 (459)
T ss_pred eeEEEEecCCCccHHHHHhhCCCC----ccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeec
Confidence 899999999999999999887654 599999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCC------------------------------C-C---------------c--cccCCccccccccccccC
Q 047768 857 GLAKFLSASPL------------------------------G-N---------------V--VETPSSSIGVKGTIGYVA 888 (1009)
Q Consensus 857 Gla~~~~~~~~------------------------------~-~---------------~--~~~~~~~~~~~gt~~y~a 888 (1009)
.++......+. . . . ..+..++..++||-.|.|
T Consensus 224 DLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlA 303 (459)
T KOG0610|consen 224 DLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLA 303 (459)
T ss_pred cccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccccccccc
Confidence 99866432110 0 0 0 112234456789999999
Q ss_pred ccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHH
Q 047768 889 PEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEEC 968 (1009)
Q Consensus 889 PE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~ 968 (1009)
||++.+...+.++|-|+|||++|||+.|+.||....+.. . +..++...+... +. .+.
T Consensus 304 PEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~-T------------l~NIv~~~l~Fp-~~---------~~v 360 (459)
T KOG0610|consen 304 PEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKE-T------------LRNIVGQPLKFP-EE---------PEV 360 (459)
T ss_pred ceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchh-h------------HHHHhcCCCcCC-CC---------Ccc
Confidence 999999999999999999999999999999997543331 1 222222222111 00 022
Q ss_pred HHHHHHHHhhccCCCCCCCCC----HHHHH
Q 047768 969 LVAVIKTGVACSIESPFDRME----MTDVV 994 (1009)
Q Consensus 969 ~~~l~~l~~~cl~~dp~~Rpt----~~evl 994 (1009)
..++.+++++-+..||.+|.- |.||-
T Consensus 361 s~~akDLIr~LLvKdP~kRlg~~rGA~eIK 390 (459)
T KOG0610|consen 361 SSAAKDLIRKLLVKDPSKRLGSKRGAAEIK 390 (459)
T ss_pred hhHHHHHHHHHhccChhhhhccccchHHhh
Confidence 335667788888888888876 55553
No 213
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=4.5e-34 Score=312.64 Aligned_cols=252 Identities=21% Similarity=0.280 Sum_probs=196.0
Q ss_pred CccCCcccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 703 FSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
|+..+.||+|+||+||+|.+..+++.||+|+++.... .....+.+|++++++++|++++++.+++.. .+..+
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-----~~~~~ 76 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYET-----KDALC 76 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEec-----CCEEE
Confidence 5667889999999999999998999999999864422 223457889999999999999999887654 36789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+||||+++++|.+++..... ..+++..+..++.|++.|+.|||+. +|+||||||+||++++++.+||+|||++
T Consensus 77 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~ 149 (285)
T cd05632 77 LVLTIMNGGDLKFHIYNMGN----PGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLA 149 (285)
T ss_pred EEEEeccCccHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcc
Confidence 99999999999988865432 1489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhcc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
....... ......|+..|+|||++.+..++.++|||||||++|||++|+.||....... ....... ...
T Consensus 150 ~~~~~~~---------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~-~~~~~~~-~~~ 218 (285)
T cd05632 150 VKIPEGE---------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV-KREEVDR-RVL 218 (285)
T ss_pred eecCCCC---------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH-hhh
Confidence 7653221 1123468999999999999999999999999999999999999997432110 0111111 000
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRME-----MTDVVVK 996 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt-----~~evl~~ 996 (1009)
..... . ......++.+++..|++.||++||+ +.|++..
T Consensus 219 ~~~~~-----~--------------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 219 ETEEV-----Y--------------SAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred ccccc-----c--------------CccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 00000 0 0112335678999999999999999 5666553
No 214
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=4.3e-34 Score=313.65 Aligned_cols=261 Identities=27% Similarity=0.426 Sum_probs=202.1
Q ss_pred hccCccCCcccccCCceEEEEEEec-----CCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccC
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHE-----NGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFK 773 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 773 (1009)
.++|++.+.||+|+||.||+|.+.. ++..||+|+++.... ...+.+.+|+.++++++|||++++++++...
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~--- 80 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVG--- 80 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC---
Confidence 4678999999999999999998752 578999999864432 2245788999999999999999999987643
Q ss_pred CCceEEEEEeccCCCCHHHHHhccCCC----------------CCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecC
Q 047768 774 GVDFKALVYEYMQNGSLEEWLHQRDDQ----------------LGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGD 837 (1009)
Q Consensus 774 ~~~~~~lv~e~~~~gsL~~~l~~~~~~----------------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrd 837 (1009)
...++|+||+++|+|.+++...... .....+++.+++.++.|++.|++|||+. +++|||
T Consensus 81 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~d 155 (288)
T cd05050 81 --KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRD 155 (288)
T ss_pred --CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---Ceeccc
Confidence 5679999999999999999754321 1123478899999999999999999998 999999
Q ss_pred CCCCceeeCCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-C
Q 047768 838 LKPSNVLLDHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-R 916 (1009)
Q Consensus 838 lk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g 916 (1009)
|||+||+++.++.+|++|||+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |
T Consensus 156 l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~ 229 (288)
T cd05050 156 LATRNCLVGENMVVKIADFGLSRNIYSADYY------KASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYG 229 (288)
T ss_pred ccHhheEecCCCceEECccccceecccCccc------cccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCC
Confidence 9999999999999999999998765432110 11112234678999999999999999999999999999998 8
Q ss_pred CCCCcccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 917 RRPTESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 917 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
..||..... .+..... .+...... ...++.++.+++.+|++.+|++|||+.|+++.
T Consensus 230 ~~p~~~~~~-----~~~~~~~--------~~~~~~~~-----------~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~ 285 (288)
T cd05050 230 MQPYYGMAH-----EEVIYYV--------RDGNVLSC-----------PDNCPLELYNLMRLCWSKLPSDRPSFASINRI 285 (288)
T ss_pred CCCCCCCCH-----HHHHHHH--------hcCCCCCC-----------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 888864321 1111111 11111100 01233568899999999999999999999998
Q ss_pred HH
Q 047768 997 LC 998 (1009)
Q Consensus 997 L~ 998 (1009)
|+
T Consensus 286 l~ 287 (288)
T cd05050 286 LQ 287 (288)
T ss_pred hh
Confidence 86
No 215
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=4.4e-34 Score=312.58 Aligned_cols=251 Identities=23% Similarity=0.327 Sum_probs=196.9
Q ss_pred CccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc---chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 703 FSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG---GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
|+..+.||+|+||+||+|.+..+++.||||.+...... ..+.+.+|+.++++++|++++++++.+.. ....+
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-----~~~~~ 76 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYET-----KDALC 76 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEec-----CCEEE
Confidence 66778899999999999999999999999998643221 23457789999999999999999988654 36789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+||||+++++|.+++..... ..+++.++..++.|++.|+.|||+. +|+||||||+||+++.++.++++|||++
T Consensus 77 lv~e~~~g~~L~~~l~~~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~ 149 (285)
T cd05630 77 LVLTLMNGGDLKFHIYHMGE----AGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLA 149 (285)
T ss_pred EEEEecCCCcHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccce
Confidence 99999999999999865432 2488999999999999999999998 9999999999999999999999999998
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhcc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
....... ......|+..|+|||++.+..++.++||||+||++|||++|+.||....... .........
T Consensus 150 ~~~~~~~---------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~--~~~~~~~~~- 217 (285)
T cd05630 150 VHVPEGQ---------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI--KREEVERLV- 217 (285)
T ss_pred eecCCCc---------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc--hHHHHHhhh-
Confidence 7543221 1123468999999999999999999999999999999999999997432210 000000000
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRME-----MTDVVV 995 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt-----~~evl~ 995 (1009)
..... .. .......+.+++.+|++.||++||| +.|+++
T Consensus 218 ~~~~~----~~--------------~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 218 KEVQE----EY--------------SEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred hhhhh----hc--------------CccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 00000 00 0112335679999999999999999 788876
No 216
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=3.9e-34 Score=322.13 Aligned_cols=273 Identities=19% Similarity=0.237 Sum_probs=198.6
Q ss_pred HHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeeccc-cCC
Q 047768 698 KATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSID-FKG 774 (1009)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~ 774 (1009)
...++|.+.+.||+|+||+||+|.+..+++.||||++..... ...+.+.+|++++++++||||+++++++.... ...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 345789999999999999999999988999999999864322 22356778999999999999999998865321 122
Q ss_pred CceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEe
Q 047768 775 VDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 854 (1009)
Q Consensus 775 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~ 854 (1009)
....++++|++ +++|.++++.. .+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~ 160 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKCQ-------KLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRIL 160 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEc
Confidence 34578999988 78999888643 289999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHH
Q 047768 855 DFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEF 933 (1009)
Q Consensus 855 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~ 933 (1009)
|||+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+
T Consensus 161 Dfg~~~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~ 228 (343)
T cd07878 161 DFGLARQADDE-----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI-DQLKRI 228 (343)
T ss_pred CCccceecCCC-----------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHH
Confidence 99999865321 223568999999999877 56899999999999999999999999643211 011111
Q ss_pred HHHhc--cch-hhhccC-------CCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 934 AKRAL--PEK-VMEIVD-------PSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 934 ~~~~~--~~~-~~~~~d-------~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
..... ... ...+.. ..+...+...... ........+.+++.+|++.||++|||+.|+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 229 MEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKK---IFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHH---hccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 11000 000 000000 0000000000000 000112346799999999999999999999854
No 217
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=3.7e-34 Score=308.49 Aligned_cols=250 Identities=32% Similarity=0.467 Sum_probs=201.6
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
.++|.+.+.||+|+||.||+|... |+.||||.++.... ..+.+.+|+.++++++|+|++++++++.. ....+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 76 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQ-----GNPLY 76 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcC-----CCCeE
Confidence 457888999999999999999874 88999999975543 45788999999999999999999998654 36789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+||||+++++|.+++...... .+++..+..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||.+
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~ 149 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRGRA----VITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLA 149 (256)
T ss_pred EEEEecCCCcHHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccc
Confidence 999999999999999865421 389999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
+...... ....++..|+|||++.++.++.++||||||+++||+++ |+.||...... ......
T Consensus 150 ~~~~~~~-----------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~- 212 (256)
T cd05039 150 KEASQGQ-----------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPHV- 212 (256)
T ss_pred ccccccc-----------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHH-
Confidence 8663221 01234668999999998899999999999999999998 99998643211 111100
Q ss_pred cchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 047768 939 PEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCH 999 (1009)
Q Consensus 939 ~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~ 999 (1009)
....... ....++.++.+++.+|+..+|++||++.|++++|+.
T Consensus 213 --------~~~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 213 --------EKGYRME----------APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred --------hcCCCCC----------CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 0000000 001234568899999999999999999999999875
No 218
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.3e-34 Score=320.37 Aligned_cols=243 Identities=21% Similarity=0.286 Sum_probs=190.7
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhcC-CCCcceEEeeeeccccCCCce
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSIR-HRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~ 777 (1009)
+|+..+.||+|+||+||+|+++.+|+.||||+++... ....+.+..|+++++.+. |++|+++.+++.. .+.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-----~~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQT-----VDR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEec-----CCE
Confidence 4677899999999999999999899999999997442 223356778889988885 5777788877543 367
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++||||+++|+|.+++.... .+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~~~------~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg 146 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQVG------KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred EEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccc
Confidence 899999999999999987654 389999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
+++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .......
T Consensus 147 ~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~-----~~~~~~i 213 (323)
T cd05615 147 MCKEHMVDG--------VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE-----DELFQSI 213 (323)
T ss_pred cccccCCCC--------ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH-----HHHHHHH
Confidence 987543211 112235689999999999999999999999999999999999999974321 1111111
Q ss_pred ccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHH
Q 047768 938 LPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMT 991 (1009)
Q Consensus 938 ~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~ 991 (1009)
. .... ..+ .....++.+++.+|++.+|.+|++..
T Consensus 214 ~--------~~~~-~~p-----------~~~~~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 214 M--------EHNV-SYP-----------KSLSKEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred H--------hCCC-CCC-----------ccCCHHHHHHHHHHcccCHhhCCCCC
Confidence 1 1000 000 01223567899999999999999853
No 219
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=6.6e-34 Score=308.96 Aligned_cols=254 Identities=27% Similarity=0.413 Sum_probs=194.5
Q ss_pred CcccccCCceEEEEEEecCCe--EEEEEEeeccc-ccchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCCCceEEEEE
Q 047768 707 NTIGRGSFGFVYKGVLHENGM--LVAVKVINLEQ-KGGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKGVDFKALVY 782 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 782 (1009)
+.||+|+||.||+|+++.++. .+|+|.++... ......+.+|+++++++ +||||+++++++... ...++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-----~~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR-----GYLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecC-----CCceEEE
Confidence 368999999999999987665 46888876322 22345788999999999 899999999997643 5679999
Q ss_pred eccCCCCHHHHHhccCCC----------CCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceE
Q 047768 783 EYMQNGSLEEWLHQRDDQ----------LGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 852 (1009)
Q Consensus 783 e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~k 852 (1009)
||+++|+|.+++...... .....+++.++..++.|++.|++|||+. +++||||||+||++++++.+|
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~k 152 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAK 152 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEE
Confidence 999999999999764321 0112478999999999999999999998 999999999999999999999
Q ss_pred EeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHH
Q 047768 853 VSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLH 931 (1009)
Q Consensus 853 l~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~ 931 (1009)
++|||+++..... ........+..|+|||++....++.++|||||||++|||++ |..||..... .
T Consensus 153 l~dfgl~~~~~~~---------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~-----~ 218 (270)
T cd05047 153 IADFGLSRGQEVY---------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-----A 218 (270)
T ss_pred ECCCCCccccchh---------hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH-----H
Confidence 9999998632211 00111234567999999988899999999999999999997 9999864321 1
Q ss_pred HHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 047768 932 EFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHAR 1001 (1009)
Q Consensus 932 ~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~ 1001 (1009)
...... +. ..... ....+..++.+++.+|++.+|.+|||+.|++..|..+.
T Consensus 219 ~~~~~~-~~--------~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 219 ELYEKL-PQ--------GYRLE----------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred HHHHHH-hC--------CCCCC----------CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 111111 00 00000 00122345789999999999999999999999998874
No 220
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=5e-34 Score=308.59 Aligned_cols=254 Identities=24% Similarity=0.326 Sum_probs=203.3
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
++|.+.+.+|+|+||.||+|....+++.+|+|++........+.+.+|++++++++||||+++++++.. ....++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~~l 77 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLR-----RDKLWI 77 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEe-----CCEEEE
Confidence 578889999999999999999988899999999976655556789999999999999999999998654 367899
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
+|||+++++|.+++..... .+++.++..++.|++.|++|||+. +|+||||+|+||++++++.+||+|||.+.
T Consensus 78 ~~e~~~~~~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 149 (262)
T cd06613 78 VMEYCGGGSLQDIYQVTRG-----PLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSA 149 (262)
T ss_pred EEeCCCCCcHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccch
Confidence 9999999999999877532 388999999999999999999998 99999999999999999999999999997
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccCCC---CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG---EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
...... .......++..|+|||.+.+. .++.++||||||+++|||++|+.||...... .... ..
T Consensus 150 ~~~~~~--------~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~----~~~~-~~ 216 (262)
T cd06613 150 QLTATI--------AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPM----RALF-LI 216 (262)
T ss_pred hhhhhh--------hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHH----HHHH-HH
Confidence 654321 112234678899999998777 8899999999999999999999998643211 1000 00
Q ss_pred ccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 938 LPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 938 ~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
... ......+ ........++.+++.+||+.+|..|||+++++.
T Consensus 217 ~~~---~~~~~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 217 SKS---NFPPPKL------------KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred Hhc---cCCCccc------------cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 0000000 011233456889999999999999999999875
No 221
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=5e-34 Score=318.85 Aligned_cols=273 Identities=19% Similarity=0.165 Sum_probs=196.1
Q ss_pred cCCccccc--CCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEE
Q 047768 705 SSNTIGRG--SFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 705 ~~~~lg~G--~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
+.++||+| +|++||++..+.+|+.||||+++.... ...+.+.+|+++++.++||||+++++++... ...++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~-----~~~~l 76 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD-----NELWV 76 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEEC-----CEEEE
Confidence 45789999 678999999999999999999965432 2235678899999999999999999997653 67899
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
|+||+++|+|.+++..+... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.++++||+.+.
T Consensus 77 v~e~~~~~~l~~~~~~~~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~ 149 (327)
T cd08227 77 VTSFMAYGSAKDLICTHFMD----GMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNL 149 (327)
T ss_pred EEeccCCCcHHHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhh
Confidence 99999999999999764321 388999999999999999999999 99999999999999999999999998765
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccCC--CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhc
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG--GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
.......... ..........++..|+|||++.+ ..++.++|||||||++|||++|+.||.......... ...
T Consensus 150 ~~~~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-~~~---- 223 (327)
T cd08227 150 SMINHGQRLR-VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL-EKL---- 223 (327)
T ss_pred cccccccccc-ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHH-HHh----
Confidence 4322110000 00011122356788999999876 468999999999999999999999997543221111 111
Q ss_pred cchhhhccCCC-------------------CCC-------hhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 047768 939 PEKVMEIVDPS-------------------LLP-------LEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTD 992 (1009)
Q Consensus 939 ~~~~~~~~d~~-------------------l~~-------~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~e 992 (1009)
........+.. ... .+................++.+++.+|++.||++|||++|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e 303 (327)
T cd08227 224 NGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSAST 303 (327)
T ss_pred cCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHH
Confidence 01110000000 000 0000000000111233457889999999999999999999
Q ss_pred HHH
Q 047768 993 VVV 995 (1009)
Q Consensus 993 vl~ 995 (1009)
+++
T Consensus 304 ll~ 306 (327)
T cd08227 304 LLN 306 (327)
T ss_pred Hhc
Confidence 986
No 222
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.8e-34 Score=329.68 Aligned_cols=196 Identities=24% Similarity=0.299 Sum_probs=168.3
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
...|.+.+.||+|+||.||+|.+..+++.||||... ...+.+|++++++++|+||+++++++... ...+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~-----~~~~ 236 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVG-----GLTC 236 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEEC-----CEEE
Confidence 457899999999999999999999889999999642 23467899999999999999999987543 6789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+|||++ .++|.+++..... .+++.+++.++.|++.||.|||++ +||||||||+|||++.++.+||+|||++
T Consensus 237 lv~e~~-~~~L~~~l~~~~~-----~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla 307 (461)
T PHA03211 237 LVLPKY-RSDLYTYLGARLR-----PLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAA 307 (461)
T ss_pred EEEEcc-CCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCc
Confidence 999999 5799999876543 389999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTE 921 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~ 921 (1009)
+....... ........||+.|+|||++.+..++.++|||||||++|||++|..|+.
T Consensus 308 ~~~~~~~~------~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf 363 (461)
T PHA03211 308 CFARGSWS------TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLF 363 (461)
T ss_pred eecccccc------cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcc
Confidence 86543211 112234579999999999999999999999999999999999887654
No 223
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.3e-34 Score=313.84 Aligned_cols=263 Identities=21% Similarity=0.273 Sum_probs=203.7
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
.++|++.+.||+|+||+||+|.+..+++.||+|++..... ...+.+.+|+++++.++||||+++++++... ...
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~ 78 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNE-----NNI 78 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecC-----CEE
Confidence 3578888999999999999999988899999999865432 2346789999999999999999999997643 678
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
++||||+++++|.+++.... .+++..+..++.+++.|+.|||+.. +++||||+|+||+++.++.++|+|||+
T Consensus 79 ~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl 150 (284)
T cd06620 79 CMCMEFMDCGSLDRIYKKGG------PIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGV 150 (284)
T ss_pred EEEEecCCCCCHHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCc
Confidence 99999999999999987654 3889999999999999999999732 899999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhc
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
+....... .....|+..|+|||++.+..++.++|||||||++||+++|+.||.......... ......
T Consensus 151 ~~~~~~~~----------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~--~~~~~~ 218 (284)
T cd06620 151 SGELINSI----------ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQ--DDPMGI 218 (284)
T ss_pred ccchhhhc----------cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhh--hhhhHH
Confidence 86543211 113468999999999988899999999999999999999999997543221000 000000
Q ss_pred cchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 047768 939 PEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKL 997 (1009)
Q Consensus 939 ~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L 997 (1009)
.+.....+...... ....+.+..+.+++.+|++.||++|||+.|+++..
T Consensus 219 ~~~~~~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 219 LDLLQQIVQEPPPR----------LPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred HHHHHHHhhccCCC----------CCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 00011111100000 00112445688999999999999999999999864
No 224
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=3.9e-34 Score=316.06 Aligned_cols=272 Identities=21% Similarity=0.299 Sum_probs=199.3
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
.++|.+.+.||+|+||.||+|.++.+++.||+|.++.... .....+.+|+.++++++||||+++++++.. ....
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~-----~~~~ 79 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT-----EKSL 79 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEec-----CCeE
Confidence 3578899999999999999999988899999999865432 234567889999999999999999999654 3678
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
++|+||++ ++|.+++..... .+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 80 ~lv~e~~~-~~l~~~l~~~~~-----~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~ 150 (301)
T cd07873 80 TLVFEYLD-KDLKQYLDDCGN-----SINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGL 150 (301)
T ss_pred EEEEeccc-cCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcc
Confidence 99999996 699999876543 378999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
+....... .......+++.|+|||++.+. .++.++|||||||++|||++|+.||....... ........
T Consensus 151 ~~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~--~~~~~~~~ 220 (301)
T cd07873 151 ARAKSIPT--------KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE--QLHFIFRI 220 (301)
T ss_pred hhccCCCC--------CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHH
Confidence 97543211 111234568899999987654 57889999999999999999999997432210 01111111
Q ss_pred ccc----hhhhccCCCCCC---hhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 938 LPE----KVMEIVDPSLLP---LEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 938 ~~~----~~~~~~d~~l~~---~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
... ....+.+..... .+.................+.+++.+|++.||.+|||++|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 221 LGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 111 111111100000 0000000000001122345779999999999999999999986
No 225
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=3.9e-34 Score=308.99 Aligned_cols=240 Identities=21% Similarity=0.354 Sum_probs=186.1
Q ss_pred CcccccCCceEEEEEEec------------CCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCC
Q 047768 707 NTIGRGSFGFVYKGVLHE------------NGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKG 774 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~------------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 774 (1009)
+.||+|+||.||+|.+.. ....||+|+++.........+.+|+.+++.++||||+++++++...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~---- 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRD---- 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecC----
Confidence 468999999999998642 2336899988655444456788999999999999999999997643
Q ss_pred CceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCc----
Q 047768 775 VDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMV---- 850 (1009)
Q Consensus 775 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~---- 850 (1009)
...++||||+++|+|..++..... .+++..++.++.|+++|++|||++ +|+||||||+||+++.++.
T Consensus 77 -~~~~lv~e~~~~~~l~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~ 147 (262)
T cd05077 77 -VENIMVEEFVEFGPLDLFMHRKSD-----VLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGEC 147 (262)
T ss_pred -CCCEEEEecccCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCC
Confidence 567899999999999999876543 389999999999999999999999 9999999999999987664
Q ss_pred ---eEEeccccccccCCCCCCCccccCCccccccccccccCccccC-CCCCCCcccchHHHHHHHHHH-hCCCCCccccc
Q 047768 851 ---AHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGL-GGEASMRGGVYSYGILLLEIF-TRRRPTESMFN 925 (1009)
Q Consensus 851 ---~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwS~Gvvl~ell-tg~~p~~~~~~ 925 (1009)
+|++|||++...... ....++..|+|||++. +..++.++|||||||++|||+ +|+.||.....
T Consensus 148 ~~~~~l~d~g~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~ 215 (262)
T cd05077 148 GPFIKLSDPGIPITVLSR------------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL 215 (262)
T ss_pred CceeEeCCCCCCccccCc------------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch
Confidence 899999998754321 1245788999999886 467899999999999999998 58888753211
Q ss_pred CCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 047768 926 EGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKL 997 (1009)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L 997 (1009)
.+... +....... ..+....+.+++.+||+.||.+||++.|+++.+
T Consensus 216 -----~~~~~---------~~~~~~~~------------~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 216 -----AEKER---------FYEGQCML------------VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred -----hHHHH---------HHhcCccC------------CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 11100 00000000 001234578999999999999999999999876
No 226
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.2e-34 Score=318.55 Aligned_cols=267 Identities=24% Similarity=0.356 Sum_probs=205.1
Q ss_pred hccCccCCcccccCCceEEEEEEec-------CCeEEEEEEeecccc-cchHHHHHHHHHHHhc-CCCCcceEEeeeecc
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHE-------NGMLVAVKVINLEQK-GGSKSFAAECEALRSI-RHRNLIKIVTICSSI 770 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 770 (1009)
..+|.+.+.||+|+||.||+|.+.. .+..||+|.++.... ...+.+.+|+++++++ +||||++++++|...
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 3478999999999999999998642 224799998864322 2246788999999999 899999999997643
Q ss_pred ccCCCceEEEEEeccCCCCHHHHHhccCCC----------CCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCC
Q 047768 771 DFKGVDFKALVYEYMQNGSLEEWLHQRDDQ----------LGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKP 840 (1009)
Q Consensus 771 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~ 840 (1009)
...++++||+++|+|.+++...... .....+++.++..++.|++.|++|||++ +|+||||||
T Consensus 91 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp 162 (334)
T cd05100 91 -----GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAA 162 (334)
T ss_pred -----CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceecccccc
Confidence 5689999999999999999764321 1123488899999999999999999998 999999999
Q ss_pred CceeeCCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCC
Q 047768 841 SNVLLDHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRP 919 (1009)
Q Consensus 841 ~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p 919 (1009)
+||+++.++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..|
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p 236 (334)
T cd05100 163 RNVLVTEDNVMKIADFGLARDVHNIDYY------KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSP 236 (334)
T ss_pred ceEEEcCCCcEEECCcccceeccccccc------ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999866432111 11112334578999999999999999999999999999999 8888
Q ss_pred CcccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 047768 920 TESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCH 999 (1009)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~ 999 (1009)
|.... ..+........ ..... ...+..++.+++.+|++.+|++||++.|+++.|++
T Consensus 237 ~~~~~-----~~~~~~~~~~~--------~~~~~-----------~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~ 292 (334)
T cd05100 237 YPGIP-----VEELFKLLKEG--------HRMDK-----------PANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDR 292 (334)
T ss_pred CCCCC-----HHHHHHHHHcC--------CCCCC-----------CCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHH
Confidence 86432 22222111100 00000 11233468899999999999999999999999998
Q ss_pred HHHhh
Q 047768 1000 ARQNF 1004 (1009)
Q Consensus 1000 i~~~~ 1004 (1009)
+....
T Consensus 293 ~~~~~ 297 (334)
T cd05100 293 VLTVT 297 (334)
T ss_pred Hhhhc
Confidence 87543
No 227
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.1e-34 Score=326.08 Aligned_cols=208 Identities=25% Similarity=0.343 Sum_probs=174.8
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
++|++.+.||+|+||+||+|+.+.+++.||||+++... ......+.+|++++..++||+|+++++++.. ...
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~-----~~~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQD-----KRN 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----CCE
Confidence 36888999999999999999999899999999996432 2234567889999999999999999988653 478
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++||||+++|+|.+++.+... +++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~~------l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG 146 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLMKKDT------LSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFG 146 (360)
T ss_pred EEEEEeCCCCccHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeecc
Confidence 8999999999999999976542 88999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCcc---------------------------ccCCccccccccccccCccccCCCCCCCcccchHHHHHH
Q 047768 858 LAKFLSASPLGNVV---------------------------ETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILL 910 (1009)
Q Consensus 858 la~~~~~~~~~~~~---------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl 910 (1009)
+++........... ..........||+.|+|||++.+..++.++|||||||++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil 226 (360)
T cd05627 147 LCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (360)
T ss_pred CCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecccccee
Confidence 98755321100000 000111245799999999999999999999999999999
Q ss_pred HHHHhCCCCCcc
Q 047768 911 LEIFTRRRPTES 922 (1009)
Q Consensus 911 ~elltg~~p~~~ 922 (1009)
|||++|+.||..
T Consensus 227 yel~tG~~Pf~~ 238 (360)
T cd05627 227 YEMLIGYPPFCS 238 (360)
T ss_pred eecccCCCCCCC
Confidence 999999999974
No 228
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.3e-33 Score=306.52 Aligned_cols=257 Identities=21% Similarity=0.320 Sum_probs=188.9
Q ss_pred CcccccCCceEEEEEEec--CCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEe
Q 047768 707 NTIGRGSFGFVYKGVLHE--NGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYE 783 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 783 (1009)
+.||+|+||.||+|.+.. ++..+|+|.++.... .....+.+|+.++++++||||+++++++... ...++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEV-----TPYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC-----CCcEEEEE
Confidence 358999999999998753 456799998865432 2235788899999999999999999987543 56799999
Q ss_pred ccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccC
Q 047768 784 YMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLS 863 (1009)
Q Consensus 784 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~ 863 (1009)
|+++|+|.+++...... .....++..+..++.|++.|++|||+. +++||||||+||+++.++++|++|||.++...
T Consensus 76 ~~~~g~L~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~ 151 (269)
T cd05087 76 FCPLGDLKGYLRSCRKA-ELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKY 151 (269)
T ss_pred CCCCCcHHHHHHHhhhc-ccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCcccccccc
Confidence 99999999999764321 112367778889999999999999999 99999999999999999999999999997543
Q ss_pred CCCCCCccccCCccccccccccccCccccCCC-------CCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHH
Q 047768 864 ASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-------EASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 935 (1009)
.... ........|+..|+|||++.+. .++.++||||||+++|||++ |+.||....... ...
T Consensus 152 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~-----~~~ 220 (269)
T cd05087 152 KEDY------YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ-----VLT 220 (269)
T ss_pred Ccce------eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH-----HHH
Confidence 2211 0112234578899999987642 35789999999999999997 999996432221 111
Q ss_pred HhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 047768 936 RALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLC 998 (1009)
Q Consensus 936 ~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~ 998 (1009)
...........++.+. ....+.+.+++..|| .+|++|||++||++.|+
T Consensus 221 ~~~~~~~~~~~~~~~~--------------~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 221 YTVREQQLKLPKPRLK--------------LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred HHhhcccCCCCCCccC--------------CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 0111111111111111 012234678888999 58999999999998764
No 229
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-34 Score=304.78 Aligned_cols=248 Identities=21% Similarity=0.339 Sum_probs=205.0
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc--chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG--GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
.-|...+.||+|.|++|-.|++..+|..||||+++...-+ ....+.+|++.|+-++|||||+++.+.... ...
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQ-----TKl 92 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQ-----TKL 92 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhccc-----ceE
Confidence 4577788999999999999999999999999999654322 345788899999999999999999985543 678
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceee-CCCCceEEeccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLL-DHDMVAHVSDFG 857 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill-~~~~~~kl~DfG 857 (1009)
|+|+|.-++|+|++|+-++..+ +.+.-..+++.||+.|+.|+|.. .+|||||||+||.+ ..-|-||++|||
T Consensus 93 yLiLELGD~GDl~DyImKHe~G-----l~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFG 164 (864)
T KOG4717|consen 93 YLILELGDGGDLFDYIMKHEEG-----LNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFG 164 (864)
T ss_pred EEEEEecCCchHHHHHHhhhcc-----ccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeecc
Confidence 9999999999999999988775 89999999999999999999998 89999999999876 567899999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCCCCC-CCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHH
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEA-SMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKR 936 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 936 (1009)
++-.+.++ ......+|+..|-|||++.+..| .++.||||+||++|-++.|+.||....+.
T Consensus 165 FSNkf~PG---------~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS---------- 225 (864)
T KOG4717|consen 165 FSNKFQPG---------KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS---------- 225 (864)
T ss_pred ccccCCCc---------chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch----------
Confidence 99776654 34456789999999999999988 57899999999999999999999865433
Q ss_pred hccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 937 ALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 937 ~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
+.+.-++|-.+.. +.....++.+++..|+..||.+|.+.+|++.
T Consensus 226 ---ETLTmImDCKYtv------------PshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 226 ---ETLTMIMDCKYTV------------PSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred ---hhhhhhhcccccC------------chhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 2223333322211 1123345678889999999999999998864
No 230
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.5e-34 Score=313.56 Aligned_cols=250 Identities=21% Similarity=0.301 Sum_probs=201.3
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
.+|++.+.||.|+||.||+|.+..+++.||+|.+........+.+.+|+++++.++|||++++++++.. ....++
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~~l 93 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLV-----GDELFV 93 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEec-----CceEEE
Confidence 468899999999999999999988999999999976555556788899999999999999999998754 367899
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
|+||+++++|.+++.... +++.++..++.+++.|++|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 94 v~e~~~~~~L~~~~~~~~-------l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~ 163 (296)
T cd06655 94 VMEYLAGGSLTDVVTETC-------MDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCA 163 (296)
T ss_pred EEEecCCCcHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccch
Confidence 999999999999987542 88999999999999999999999 99999999999999999999999999988
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccc
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPE 940 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 940 (1009)
...... .......|+..|+|||.+.+..++.++|||||||++|||++|+.||...... ..... ....
T Consensus 164 ~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~----~~~~~-~~~~ 230 (296)
T cd06655 164 QITPEQ--------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL----RALYL-IATN 230 (296)
T ss_pred hccccc--------ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHH-HHhc
Confidence 654321 1112345788999999999989999999999999999999999998643211 11100 0000
Q ss_pred hhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 941 KVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 941 ~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
. .+.+. ........+.+++.+||..||.+||++.+++.
T Consensus 231 ~-----~~~~~------------~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 231 G-----TPELQ------------NPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred C-----CcccC------------CcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0 00000 00122345778999999999999999999975
No 231
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=7.9e-34 Score=307.99 Aligned_cols=254 Identities=24% Similarity=0.356 Sum_probs=199.6
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccc---------hHHHHHHHHHHHhcCCCCcceEEeeeecccc
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGG---------SKSFAAECEALRSIRHRNLIKIVTICSSIDF 772 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 772 (1009)
+|.+...||+|+||.||+|.+..+++.||+|.+....... .+.+.+|++++++++||||+++++++..
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--- 77 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLD--- 77 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe---
Confidence 4778899999999999999998889999999886443221 2468889999999999999999998654
Q ss_pred CCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceE
Q 047768 773 KGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 852 (1009)
Q Consensus 773 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~k 852 (1009)
....++|+||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+|
T Consensus 78 --~~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~ 146 (267)
T cd06628 78 --ADHLNIFLEYVPGGSVAALLNNYG------AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIK 146 (267)
T ss_pred --CCccEEEEEecCCCCHHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEE
Confidence 367889999999999999997654 378889999999999999999998 999999999999999999999
Q ss_pred EeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHH
Q 047768 853 VSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHE 932 (1009)
Q Consensus 853 l~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~ 932 (1009)
|+|||.++.......... .........|+..|+|||.+.+..++.++||||+||++|||++|+.||...... ..
T Consensus 147 l~dfg~~~~~~~~~~~~~--~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~ 220 (267)
T cd06628 147 ISDFGISKKLEANSLSTK--TNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL----QA 220 (267)
T ss_pred ecccCCCcccccccccCC--ccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH----HH
Confidence 999999987653211110 011112345889999999999999999999999999999999999999743211 11
Q ss_pred HHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 933 FAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 933 ~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.. ......... ........+.+++.+||+.||.+||++.|+++
T Consensus 221 ~~---------~~~~~~~~~-----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 221 IF---------KIGENASPE-----------IPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred HH---------HHhccCCCc-----------CCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 10 000000000 01123456789999999999999999999975
No 232
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=7.3e-34 Score=306.81 Aligned_cols=253 Identities=26% Similarity=0.468 Sum_probs=198.4
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
++|.+.+.||+|+||.||+|.+.. +..||+|++.... ...+.+.+|++++++++|+|++++++++.. ...++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~-~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~~ 77 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNG-TTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE------EPIYI 77 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcC-CceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC------CCcEE
Confidence 468888999999999999998864 4569999875432 234678899999999999999999987632 45689
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
||||+++++|.++++.... ..+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||.++
T Consensus 78 v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~ 150 (260)
T cd05069 78 VTEFMGKGSLLDFLKEGDG----KYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLAR 150 (260)
T ss_pred EEEcCCCCCHHHHHhhCCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccce
Confidence 9999999999999976432 2378999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhcc
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
....... .......++..|+|||+..+..++.++||||||+++|||++ |+.||...... ..........
T Consensus 151 ~~~~~~~-------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~- 220 (260)
T cd05069 151 LIEDNEY-------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR--EVLEQVERGY- 220 (260)
T ss_pred EccCCcc-------cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC-
Confidence 6643211 11112346778999999998999999999999999999999 89998643211 0111100000
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCH 999 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~ 999 (1009)
. .. .....+..+.+++.+|++.+|++||+++++.+.|+.
T Consensus 221 -------~---~~-----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 221 -------R---MP-----------CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred -------C---CC-----------CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0 00 011234568899999999999999999999998874
No 233
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=5.2e-34 Score=307.29 Aligned_cols=250 Identities=23% Similarity=0.336 Sum_probs=201.9
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
++|++.+.||+|+||.||+|.+..+++.||+|.++.... .+.+.+|++++++++|+||+++++++... ...++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~l 75 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKN-----TDLWI 75 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecC-----CcEEE
Confidence 578899999999999999999988889999999865433 67899999999999999999999987543 67899
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
++||+++++|.+++..... .+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.+||+|||++.
T Consensus 76 ~~e~~~~~~L~~~l~~~~~-----~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~ 147 (256)
T cd06612 76 VMEYCGAGSVSDIMKITNK-----TLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSG 147 (256)
T ss_pred EEecCCCCcHHHHHHhCcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccch
Confidence 9999999999999976443 389999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccc
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPE 940 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 940 (1009)
...... .......|+..|+|||++.+..++.++||||||+++|||++|+.||....... ... .
T Consensus 148 ~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~----~~~-~---- 210 (256)
T cd06612 148 QLTDTM--------AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR----AIF-M---- 210 (256)
T ss_pred hcccCc--------cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh----hhh-h----
Confidence 665321 11122447889999999999999999999999999999999999987432110 000 0
Q ss_pred hhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 941 KVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 941 ~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
........+ .........+.+++.+|++.+|++|||+.|+++
T Consensus 211 -~~~~~~~~~------------~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 211 -IPNKPPPTL------------SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred -hccCCCCCC------------CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 000000000 001123346789999999999999999999975
No 234
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.9e-34 Score=321.25 Aligned_cols=238 Identities=26% Similarity=0.294 Sum_probs=185.5
Q ss_pred CcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHH-HHHhcCCCCcceEEeeeeccccCCCceEEEEE
Q 047768 707 NTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECE-ALRSIRHRNLIKIVTICSSIDFKGVDFKALVY 782 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 782 (1009)
+.||+|+||.||+|++..+++.||+|++.... ......+.+|.. +++.++||||+++++++.. ....++||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~-----~~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQT-----AEKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEc-----CCEEEEEE
Confidence 46999999999999999899999999986432 122334555554 5788899999999988654 36789999
Q ss_pred eccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccccc
Q 047768 783 EYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 862 (1009)
Q Consensus 783 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~ 862 (1009)
||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 146 (321)
T cd05603 76 DYVNGGELFFHLQRER------CFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (321)
T ss_pred cCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccC
Confidence 9999999999887644 278889999999999999999998 9999999999999999999999999998753
Q ss_pred CCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchh
Q 047768 863 SASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKV 942 (1009)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 942 (1009)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .........
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i~---- 209 (321)
T cd05603 147 VEPE--------ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-----VSQMYDNIL---- 209 (321)
T ss_pred CCCC--------CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC-----HHHHHHHHh----
Confidence 2211 12234568999999999999999999999999999999999999996431 112211111
Q ss_pred hhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHH
Q 047768 943 MEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMT 991 (1009)
Q Consensus 943 ~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~ 991 (1009)
..... .+ .....++.+++.+|++.||.+||++.
T Consensus 210 ----~~~~~-~~-----------~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 210 ----HKPLQ-LP-----------GGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred ----cCCCC-CC-----------CCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 10000 00 01223577999999999999999864
No 235
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5e-34 Score=322.05 Aligned_cols=194 Identities=23% Similarity=0.332 Sum_probs=165.8
Q ss_pred HHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 698 KATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
....+|.+.+.||+|+||.||+|.+..+++.||+|+... .....|+.++++++||||+++++++... ..
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~ 131 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK------GTTLIEAMLLQNVNHPSVIRMKDTLVSG-----AI 131 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc------cccHHHHHHHHhCCCCCCcChhheEEeC-----Ce
Confidence 344679999999999999999999998889999997532 2335699999999999999999987643 67
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++|+||+ .++|.+++..... .+++.++..++.|++.||.|||++ +||||||||+||+++.++.+||+|||
T Consensus 132 ~~lv~e~~-~~~l~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG 202 (357)
T PHA03209 132 TCMVLPHY-SSDLYTYLTKRSR-----PLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLG 202 (357)
T ss_pred eEEEEEcc-CCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCc
Confidence 89999999 5699999876543 389999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCC
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPT 920 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~ 920 (1009)
+++..... ....+..||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 203 ~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 203 AAQFPVVA---------PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred cccccccC---------cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 99753221 1223456899999999999999999999999999999999965554
No 236
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.7e-33 Score=309.61 Aligned_cols=252 Identities=23% Similarity=0.302 Sum_probs=199.0
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
+.|++.+.||+|+||.||+|++..+++.||+|++........+.+.+|++++++++|||++++++++... ...++
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~l 86 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWD-----GKLWI 86 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC-----CeEEE
Confidence 5688899999999999999999988999999998755444456788999999999999999999986543 57899
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
||||+++++|..++.+... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 87 v~e~~~~~~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~ 158 (292)
T cd06644 87 MIEFCPGGAVDAIMLELDR-----GLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSA 158 (292)
T ss_pred EEecCCCCcHHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccce
Confidence 9999999999988866443 389999999999999999999998 99999999999999999999999999987
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccC-----CCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGL-----GGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 935 (1009)
...... .......++..|+|||++. ...++.++|||||||++|||++|+.||..... .+...
T Consensus 159 ~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----~~~~~ 225 (292)
T cd06644 159 KNVKTL--------QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-----MRVLL 225 (292)
T ss_pred eccccc--------cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH-----HHHHH
Confidence 543211 1122345788999999874 44578899999999999999999999864321 11111
Q ss_pred HhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 936 RALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 936 ~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
...... .+.. .....+..++.+++.+||+.+|++||++.|+++
T Consensus 226 ~~~~~~-----~~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 226 KIAKSE-----PPTL------------SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred HHhcCC-----CccC------------CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 100000 0000 001123345778999999999999999999976
No 237
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=7.7e-34 Score=309.29 Aligned_cols=249 Identities=24% Similarity=0.327 Sum_probs=201.0
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc-ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ-KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
++|++.+.||.|+||.||+|.+..+++.||+|++.... ......+.+|+++++.++|+|++++++++... ...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKG-----SKLW 75 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEEC-----CeEE
Confidence 36888899999999999999999899999999987543 23346788999999999999999999986543 6789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+|+||+++++|.+++... .+++..++.++.|++.|+.|||+. +++||||+|+||++++++.++++|||++
T Consensus 76 ~v~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 145 (274)
T cd06609 76 IIMEYCGGGSCLDLLKPG-------KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVS 145 (274)
T ss_pred EEEEeeCCCcHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccc
Confidence 999999999999999765 288999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhcc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
+...... .......|+..|+|||++.+..++.++||||||+++|||+||+.||...... ..... ..
T Consensus 146 ~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~-----~~~~~-~~ 211 (274)
T cd06609 146 GQLTSTM--------SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM-----RVLFL-IP 211 (274)
T ss_pred eeecccc--------cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH-----HHHHH-hh
Confidence 8775431 1122345788999999999988999999999999999999999999643211 11100 00
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.. ..+.+. ...+...+.+++.+|+..+|++|||++++++
T Consensus 212 ~~----~~~~~~-------------~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 212 KN----NPPSLE-------------GNKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred hc----CCCCCc-------------ccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 00 000000 0013345778999999999999999999976
No 238
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=4e-34 Score=308.93 Aligned_cols=253 Identities=28% Similarity=0.423 Sum_probs=198.4
Q ss_pred CccCCcccccCCceEEEEEEecCCeEEEEEEeecccccch--HHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEE
Q 047768 703 FSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGS--KSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
|++.+.||+|+||+||+|+...+++.||+|++........ ....+|+.++++++||||+++++++.. ....++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~~ 75 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD-----DNYLYI 75 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-----SSEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-----cccccc
Confidence 5677899999999999999999999999999976543322 234569999999999999999999765 377889
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
||||+++++|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+||++++++.++|+|||.+.
T Consensus 76 v~~~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 76 VMEYCPGGSLQDYLQKNK------PLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSV 146 (260)
T ss_dssp EEEEETTEBHHHHHHHHS------SBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTE
T ss_pred cccccccccccccccccc------cccccccccccccccccccccccc---ccccccccccccccccccccccccccccc
Confidence 999999999999998433 389999999999999999999999 99999999999999999999999999997
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccC-CCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhcc
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGL-GGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
..... ........++..|+|||++. +..++.++||||+|+++|+|++|+.||...... ...........
T Consensus 147 ~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~--~~~~~~~~~~~ 216 (260)
T PF00069_consen 147 KLSEN--------NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD--DQLEIIEKILK 216 (260)
T ss_dssp ESTST--------TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH--HHHHHHHHHHH
T ss_pred ccccc--------ccccccccccccccccccccccccccccccccccccccccccccccccccccch--hhhhhhhhccc
Confidence 64111 12233456899999999998 888999999999999999999999999754100 11111111110
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
....... ........++.+++.+|++.||++||++.|+++
T Consensus 217 ~~~~~~~----------------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 217 RPLPSSS----------------QQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp THHHHHT----------------TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred ccccccc----------------cccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0000000 000011257889999999999999999999975
No 239
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.1e-34 Score=344.06 Aligned_cols=261 Identities=18% Similarity=0.261 Sum_probs=199.9
Q ss_pred HHHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCC
Q 047768 697 SKATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKG 774 (1009)
Q Consensus 697 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 774 (1009)
....++|.+.+.||+|+||+||+|.+..++..||+|++..... .....+..|+.++++++||||+++++++... .
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de---~ 85 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNK---A 85 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEec---C
Confidence 3445789999999999999999999999999999999865422 2346788999999999999999999986432 2
Q ss_pred CceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCC----CCceecCCCCCceeeCC---
Q 047768 775 VDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQ----PPIVHGDLKPSNVLLDH--- 847 (1009)
Q Consensus 775 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~----~~ivHrdlk~~Nill~~--- 847 (1009)
....++||||+++|+|.+++...... ...+++..++.|+.||+.||+|||+... .+||||||||+|||++.
T Consensus 86 ~~~lyIVMEY~~gGSL~~lL~k~~~~--~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~ 163 (1021)
T PTZ00266 86 NQKLYILMEFCDAGDLSRNIQKCYKM--FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIR 163 (1021)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcc
Confidence 35689999999999999999764221 1248999999999999999999998521 25999999999999964
Q ss_pred --------------CCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCC--CCCCCcccchHHHHHHH
Q 047768 848 --------------DMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG--GEASMRGGVYSYGILLL 911 (1009)
Q Consensus 848 --------------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gvvl~ 911 (1009)
.+.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|
T Consensus 164 ~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s---------~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILY 234 (1021)
T PTZ00266 164 HIGKITAQANNLNGRPIAKIGDFGLSKNIGIES---------MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIY 234 (1021)
T ss_pred ccccccccccccCCCCceEEccCCccccccccc---------cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHH
Confidence 2359999999998654321 1223568999999999854 45889999999999999
Q ss_pred HHHhCCCCCcccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHH
Q 047768 912 EIFTRRRPTESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMT 991 (1009)
Q Consensus 912 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~ 991 (1009)
||++|+.||.... ............ +.+ + .......+.+++..||+.+|.+||++.
T Consensus 235 ELLTGk~PF~~~~----~~~qli~~lk~~-------p~l---p----------i~~~S~eL~dLI~~~L~~dPeeRPSa~ 290 (1021)
T PTZ00266 235 ELCSGKTPFHKAN----NFSQLISELKRG-------PDL---P----------IKGKSKELNILIKNLLNLSAKERPSAL 290 (1021)
T ss_pred HHHHCCCCCCcCC----cHHHHHHHHhcC-------CCC---C----------cCCCCHHHHHHHHHHhcCChhHCcCHH
Confidence 9999999996422 111111110000 000 0 001234578999999999999999999
Q ss_pred HHHH
Q 047768 992 DVVV 995 (1009)
Q Consensus 992 evl~ 995 (1009)
|++.
T Consensus 291 QlL~ 294 (1021)
T PTZ00266 291 QCLG 294 (1021)
T ss_pred HHhc
Confidence 9984
No 240
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=4.5e-34 Score=310.61 Aligned_cols=239 Identities=21% Similarity=0.329 Sum_probs=184.0
Q ss_pred cccccCCceEEEEEEecC------------------------CeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceE
Q 047768 708 TIGRGSFGFVYKGVLHEN------------------------GMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKI 763 (1009)
Q Consensus 708 ~lg~G~~g~V~~~~~~~~------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 763 (1009)
.||+|+||.||+|....+ +..||+|+++.........+.+|++++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 599999999999986421 24689998865444344678889999999999999999
Q ss_pred EeeeeccccCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCce
Q 047768 764 VTICSSIDFKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNV 843 (1009)
Q Consensus 764 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Ni 843 (1009)
+++|... ...++||||+++|+|.+++..... .+++..+..++.|+++||+|||++ +|+||||||+||
T Consensus 82 ~~~~~~~-----~~~~lv~ey~~~g~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Ni 148 (274)
T cd05076 82 HGVCVRG-----SENIMVEEFVEHGPLDVCLRKEKG-----RVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNI 148 (274)
T ss_pred EEEEEeC-----CceEEEEecCCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccE
Confidence 9998653 577999999999999999876443 378999999999999999999998 999999999999
Q ss_pred eeCCCC-------ceEEeccccccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHH-
Q 047768 844 LLDHDM-------VAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIF- 914 (1009)
Q Consensus 844 ll~~~~-------~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~ell- 914 (1009)
+++..+ .+|++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++||++
T Consensus 149 ll~~~~~~~~~~~~~kl~d~g~~~~~~~~------------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~ 216 (274)
T cd05076 149 LLARLGLAEGTSPFIKLSDPGVSFTALSR------------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICF 216 (274)
T ss_pred EEeccCcccCccceeeecCCccccccccc------------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHh
Confidence 997654 4899999988643221 11346788999998865 56899999999999999995
Q ss_pred hCCCCCcccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 047768 915 TRRRPTESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVV 994 (1009)
Q Consensus 915 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl 994 (1009)
+|+.||....... ..... ..... .+ .+....+.+++.+||+.+|++||++.+++
T Consensus 217 ~g~~p~~~~~~~~--~~~~~------------~~~~~-~~-----------~~~~~~~~~li~~cl~~~p~~Rps~~~il 270 (274)
T cd05076 217 DGEVPLKERTPSE--KERFY------------EKKHR-LP-----------EPSCKELATLISQCLTYEPTQRPSFRTIL 270 (274)
T ss_pred CCCCCccccChHH--HHHHH------------HhccC-CC-----------CCCChHHHHHHHHHcccChhhCcCHHHHH
Confidence 6899986432111 01110 00000 00 01123578999999999999999999999
Q ss_pred HHH
Q 047768 995 VKL 997 (1009)
Q Consensus 995 ~~L 997 (1009)
+.|
T Consensus 271 ~~L 273 (274)
T cd05076 271 RDL 273 (274)
T ss_pred Hhh
Confidence 876
No 241
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=6.7e-34 Score=317.90 Aligned_cols=202 Identities=24% Similarity=0.334 Sum_probs=172.2
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
++|.+.+.||+|+||+||+|+++.+++.||+|+++... ......+.+|+.++..++|++|+++++++.. ...
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~-----~~~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQD-----ENY 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----CCE
Confidence 47889999999999999999999899999999986422 2223457889999999999999999998654 378
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++||||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~~~~-----~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG 147 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSKFED-----RLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFG 147 (331)
T ss_pred EEEEEeCCCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEecc
Confidence 8999999999999999987433 388999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCC-----CCCCCcccchHHHHHHHHHHhCCCCCcc
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-----GEASMRGGVYSYGILLLEIFTRRRPTES 922 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwS~Gvvl~elltg~~p~~~ 922 (1009)
+++....... .......||+.|+|||++.+ +.++.++|||||||++|||++|+.||..
T Consensus 148 ~a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~ 210 (331)
T cd05624 148 SCLKMNQDGT-------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred ceeeccCCCc-------eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence 9986543211 11123568999999999876 5678999999999999999999999964
No 242
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.1e-33 Score=309.23 Aligned_cols=254 Identities=22% Similarity=0.355 Sum_probs=201.2
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
.++|++.+.||+|+||.||+|.+..++..||+|+++.......+.+.+|++++++++|||++++++++.. ....+
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 78 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFY-----ENKLW 78 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEec-----CCeEE
Confidence 3578899999999999999999988899999999976554455678899999999999999999998654 36789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+||||+++++|.+++..... .+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.++|+|||++
T Consensus 79 lv~e~~~~~~L~~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~ 150 (280)
T cd06611 79 ILIEFCDGGALDSIMLELER-----GLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVS 150 (280)
T ss_pred EEeeccCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccc
Confidence 99999999999999877543 389999999999999999999999 9999999999999999999999999988
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccC-----CCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHH
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGL-----GGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFA 934 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 934 (1009)
....... .......|++.|+|||.+. ...++.++||||||+++|||++|+.||...... +..
T Consensus 151 ~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~-----~~~ 217 (280)
T cd06611 151 AKNKSTL--------QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM-----RVL 217 (280)
T ss_pred hhhcccc--------cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH-----HHH
Confidence 7543221 1122346889999999874 345688999999999999999999998743211 111
Q ss_pred HHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 935 KRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 935 ~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
...... ..+.+. .+..+..++.+++.+|++.+|++||++.++++.
T Consensus 218 ~~~~~~-----~~~~~~------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 218 LKILKS-----EPPTLD------------QPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred HHHhcC-----CCCCcC------------CcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 110000 000000 011233457789999999999999999999764
No 243
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=9.4e-34 Score=317.00 Aligned_cols=202 Identities=24% Similarity=0.322 Sum_probs=171.3
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
++|.+.++||+|+||+||+++++.+++.||+|++.... ......+.+|+.++..++|++|+++++++.. ...
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQD-----ENN 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEec-----CCE
Confidence 36888999999999999999999889999999985422 2223458889999999999999999988654 367
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++||||+++|+|.+++.+... .+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~ey~~~g~L~~~l~~~~~-----~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG 147 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSKFED-----RLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFG 147 (332)
T ss_pred EEEEEeccCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecc
Confidence 8999999999999999987433 388999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccC-----CCCCCCcccchHHHHHHHHHHhCCCCCcc
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGL-----GGEASMRGGVYSYGILLLEIFTRRRPTES 922 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvvl~elltg~~p~~~ 922 (1009)
+++....... .......||+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 148 ~a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~ 210 (332)
T cd05623 148 SCLKLMEDGT-------VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (332)
T ss_pred hheecccCCc-------ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCC
Confidence 9975532211 1112356899999999986 34678999999999999999999999964
No 244
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.5e-34 Score=311.84 Aligned_cols=241 Identities=22% Similarity=0.354 Sum_probs=186.8
Q ss_pred CcccccCCceEEEEEEecCCe-------EEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 707 NTIGRGSFGFVYKGVLHENGM-------LVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~-------~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
+.||+|+||.||+|..+..+. .||+|.+........+.+.+|+.+++.++|||++++++++... ...+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~-----~~~~ 75 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCG-----DESI 75 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeC-----CCcE
Confidence 469999999999999865443 4888988654444456788999999999999999999997643 5678
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCc--------e
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMV--------A 851 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~--------~ 851 (1009)
+||||+++|+|.++++.... .+++..+..++.|++.|++|||++ +|+||||||+||+++.++. +
T Consensus 76 lv~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~ 147 (258)
T cd05078 76 MVQEYVKFGSLDTYLKKNKN-----LINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFI 147 (258)
T ss_pred EEEecCCCCcHHHHHhcCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceE
Confidence 99999999999999987653 388999999999999999999999 9999999999999987765 6
Q ss_pred EEeccccccccCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCC-CCCcccccCCcc
Q 047768 852 HVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRR-RPTESMFNEGLT 929 (1009)
Q Consensus 852 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~-~p~~~~~~~~~~ 929 (1009)
+++|||.+...... ....++..|+|||++.+. .++.++|||||||++|||++|. .||.....
T Consensus 148 ~l~d~g~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~---- 211 (258)
T cd05078 148 KLSDPGISITVLPK------------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS---- 211 (258)
T ss_pred EecccccccccCCc------------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH----
Confidence 99999988654321 124578899999998874 5799999999999999999985 55442111
Q ss_pred HHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 047768 930 LHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLC 998 (1009)
Q Consensus 930 ~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~ 998 (1009)
..... +..... ..+ .....++.+++.+||+.||++|||++|+++.|+
T Consensus 212 -~~~~~---------~~~~~~-~~~-----------~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 212 -QKKLQ---------FYEDRH-QLP-----------APKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred -HHHHH---------HHHccc-cCC-----------CCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 11000 000000 000 012245789999999999999999999998763
No 245
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=3.3e-34 Score=313.97 Aligned_cols=271 Identities=20% Similarity=0.303 Sum_probs=195.9
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
+|++.+.||+|+||.||+|.++.+|+.||+|+++.... .....+.+|++++++++|||++++++++.. ....+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~-----~~~~~ 75 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHS-----DKKLT 75 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhcc-----CCceE
Confidence 47788999999999999999998999999999865422 223567889999999999999999998543 46789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+|+||++ ++|.+++..... .+++..++.++.|+++|+.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 76 lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~ 146 (284)
T cd07839 76 LVFEYCD-QDLKKYFDSCNG-----DIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLA 146 (284)
T ss_pred EEEecCC-CCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchh
Confidence 9999996 588888876433 389999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
+...... .......++..|+|||++.+. .++.++|||||||++|||+||+.|+..................
T Consensus 147 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~ 218 (284)
T cd07839 147 RAFGIPV--------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLG 218 (284)
T ss_pred hccCCCC--------CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhC
Confidence 7653321 111234578899999988764 4689999999999999999999986532221111111111000
Q ss_pred c--ch----hhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 939 P--EK----VMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 939 ~--~~----~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
. +. ..+..+............. .........++.+++.+|++.||.+|||++|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 219 TPTEESWPGVSKLPDYKPYPMYPATTSL-VNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred CCChHHhHHhhhcccccccCCCCCcchh-hhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0 00 0011110000000000000 0000112346779999999999999999999975
No 246
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.7e-33 Score=303.51 Aligned_cols=251 Identities=21% Similarity=0.304 Sum_probs=199.8
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
+|++.+.||+|++|.||+|.++.+++.||+|.+..... ...+.+.+|++++++++|+|++++++.+.. .....+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~~ 76 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEG----EDGLLY 76 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecC----CCCEEE
Confidence 47888999999999999999998899999999865432 234578899999999999999999887532 234678
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+||||+++++|.+++..... ..+++.+++.++.+++.|++|||+. +|+||||||+||+++.++.++|+|||++
T Consensus 77 lv~e~~~~~~l~~~l~~~~~----~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~ 149 (257)
T cd08223 77 IVMGFCEGGDLYHKLKEQKG----KLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIA 149 (257)
T ss_pred EEecccCCCcHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccce
Confidence 99999999999999986432 2489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhcc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
....... .......|++.|+|||+..+..++.++||||+|+++|||++|+.||.... ..........
T Consensus 150 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~-----~~~~~~~~~~ 216 (257)
T cd08223 150 RVLENQC--------DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD-----MNSLVYRIIE 216 (257)
T ss_pred EEecccC--------CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-----HHHHHHHHHh
Confidence 8664321 11223467899999999999999999999999999999999999986321 1111111111
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
..+... ......++.+++.+|++.+|++||++.|+++
T Consensus 217 --------~~~~~~-----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 217 --------GKLPPM-----------PKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred --------cCCCCC-----------ccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 001000 1123346889999999999999999999975
No 247
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=4.1e-34 Score=311.95 Aligned_cols=248 Identities=23% Similarity=0.322 Sum_probs=198.3
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc-ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ-KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
.|+..+.||+|+||.||+|.+..+++.||+|.++... ....+.+.+|++++++++||||+++++++.. ....++
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 79 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLK-----GTKLWI 79 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhccccc-----CCceEE
Confidence 4666788999999999999998889999999986443 2234578899999999999999999998654 367899
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
|+||+++++|.+++... .+++..+..++.|++.|+.|||++ +++|+||+|+||++++++.+|++|||++.
T Consensus 80 v~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06642 80 IMEYLGGGSALDLLKPG-------PLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAG 149 (277)
T ss_pred EEEccCCCcHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccc
Confidence 99999999999998653 278999999999999999999998 99999999999999999999999999997
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccc
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPE 940 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 940 (1009)
...... .......|+..|+|||++.+..++.++|||||||++|||++|+.||...... ....
T Consensus 150 ~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-----~~~~----- 211 (277)
T cd06642 150 QLTDTQ--------IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM-----RVLF----- 211 (277)
T ss_pred cccCcc--------hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh-----hHHh-----
Confidence 654321 1112245788999999999999999999999999999999999998643211 0000
Q ss_pred hhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 941 KVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 941 ~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
.+...... .....+...+.+++.+|++.+|++||++.|+++.
T Consensus 212 ----~~~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 212 ----LIPKNSPP----------TLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred ----hhhcCCCC----------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 00000000 0011234467899999999999999999999984
No 248
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.9e-33 Score=303.97 Aligned_cols=254 Identities=30% Similarity=0.481 Sum_probs=200.9
Q ss_pred CcccccCCceEEEEEEecC---CeEEEEEEeecccccc-hHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEE
Q 047768 707 NTIGRGSFGFVYKGVLHEN---GMLVAVKVINLEQKGG-SKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVY 782 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 782 (1009)
+.||+|+||.||+|.+... +..||+|+++...... .+.+.+|++.++.++|+|++++++++.. ....++||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTE-----EEPLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecC-----CCceEEEE
Confidence 4699999999999999865 8899999997554333 5788999999999999999999998754 36789999
Q ss_pred eccCCCCHHHHHhccCCC---CCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 783 EYMQNGSLEEWLHQRDDQ---LGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 783 e~~~~gsL~~~l~~~~~~---~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
||+++++|.+++...... .....+++.+++.++.|++.|++|||++ +|+||||+|+||++++++.+|++|||.+
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~ 152 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLS 152 (262)
T ss_pred EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccc
Confidence 999999999999876210 0012489999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
+....... ........++..|+|||.+....++.++||||+|+++|||++ |+.||.... .........
T Consensus 153 ~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~~~~~~ 221 (262)
T cd00192 153 RDVYDDDY------YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLS-----NEEVLEYLR 221 (262)
T ss_pred cccccccc------cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHHHH
Confidence 87654321 011223557889999999988899999999999999999999 699987542 111111111
Q ss_pred cchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 047768 939 PEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLC 998 (1009)
Q Consensus 939 ~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~ 998 (1009)
+..... ....+..++.+++.+|++.+|++||++.|+++.|+
T Consensus 222 --------~~~~~~-----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 222 --------KGYRLP-----------KPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred --------cCCCCC-----------CCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 000000 01122456889999999999999999999998763
No 249
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=9.5e-34 Score=305.28 Aligned_cols=251 Identities=26% Similarity=0.460 Sum_probs=198.4
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
.+|++.+.||+|+||.||+|.+. +++.+|+|+++... .....+.+|++++++++|||++++++++... ...++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~~ 76 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTER-----SPICL 76 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccC-----CceEE
Confidence 46888899999999999999886 57789999886432 2346789999999999999999999986543 57899
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
|+||+++++|.+++..... .+++..++.++.+++.|++|||+. +++||||||+||+++.++.+||+|||.++
T Consensus 77 v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 148 (256)
T cd05112 77 VFEFMEHGCLSDYLRAQRG-----KFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTR 148 (256)
T ss_pred EEEcCCCCcHHHHHHhCcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCccee
Confidence 9999999999999976543 378999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhcc
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
....... ....+..++.+|+|||+..++.++.++||||||+++|||++ |+.||.... ........ .
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-----~~~~~~~~-~ 215 (256)
T cd05112 149 FVLDDQY-------TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRS-----NSEVVETI-N 215 (256)
T ss_pred ecccCcc-------cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCC-----HHHHHHHH-h
Confidence 6543211 11122345678999999998899999999999999999998 999986422 11111111 0
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKL 997 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L 997 (1009)
... ....+ .....++.+++.+||+.+|++||++.|+++.|
T Consensus 216 ~~~-~~~~~-----------------~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 216 AGF-RLYKP-----------------RLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCC-CCCCC-----------------CCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 000 00000 01234688999999999999999999999876
No 250
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2.1e-33 Score=302.63 Aligned_cols=251 Identities=21% Similarity=0.300 Sum_probs=202.3
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc--ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ--KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
+|+..+.||+|+||.||.++...+++.||+|.+.... ....+.+.+|++++++++|+||+++++++.. ....+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMD-----DNTLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEec-----CCeEE
Confidence 4788899999999999999999999999999986543 2334678899999999999999999999754 36789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+||||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++||||+|+||++++++.+||+|||.+
T Consensus 76 ~~~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~ 148 (256)
T cd08221 76 IEMEYANGGTLYDKIVRQKG----QLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGIS 148 (256)
T ss_pred EEEEecCCCcHHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcce
Confidence 99999999999999986532 2488999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhcc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
+....... ......|++.|+|||+..+..++.++||||||+++|||++|+.||.... ..+......
T Consensus 149 ~~~~~~~~--------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-----~~~~~~~~~- 214 (256)
T cd08221 149 KILGSEYS--------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATN-----PLNLVVKIV- 214 (256)
T ss_pred EEcccccc--------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHH-
Confidence 86643221 1223568899999999988889999999999999999999999986321 111111111
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
....... ......++.+++.+|++.+|++||++.|+++.
T Consensus 215 -------~~~~~~~-----------~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 215 -------QGNYTPV-----------VSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred -------cCCCCCC-----------ccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 1111100 01233457899999999999999999999875
No 251
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2.1e-33 Score=301.46 Aligned_cols=247 Identities=28% Similarity=0.402 Sum_probs=193.3
Q ss_pred CcccccCCceEEEEEEecCCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEecc
Q 047768 707 NTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYEYM 785 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 785 (1009)
+.||+|+||.||+|... +++.||+|+++.... .....+.+|++++++++||||+++++++... ...++||||+
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~ 74 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQR-----QPIYIVMELV 74 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecC-----CccEEEEECC
Confidence 36999999999999865 688999999864432 2234688999999999999999999997643 5679999999
Q ss_pred CCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccCCC
Q 047768 786 QNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSAS 865 (1009)
Q Consensus 786 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 865 (1009)
++++|.+++..... .+++..+..++.|++.|+.|+|+. +++||||||+||+++.++.+|++|||++......
T Consensus 75 ~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 146 (250)
T cd05085 75 PGGDFLSFLRKKKD-----ELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDG 146 (250)
T ss_pred CCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceecccc
Confidence 99999999876543 378999999999999999999998 9999999999999999999999999999754332
Q ss_pred CCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhccchhhh
Q 047768 866 PLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRALPEKVME 944 (1009)
Q Consensus 866 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 944 (1009)
.. .......++..|+|||+..+..++.++||||||+++||+++ |..||...... .........
T Consensus 147 ~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~-----~~~~~~~~~---- 210 (250)
T cd05085 147 IY-------SSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ-----QAREQVEKG---- 210 (250)
T ss_pred cc-------ccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH-----HHHHHHHcC----
Confidence 11 01111234678999999998999999999999999999999 99998643211 111111000
Q ss_pred ccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 047768 945 IVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLC 998 (1009)
Q Consensus 945 ~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~ 998 (1009)
... .....++..+.+++.+|++.+|++||++.|+++.|.
T Consensus 211 -----~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 211 -----YRM----------SCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred -----CCC----------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 000 000123356889999999999999999999998874
No 252
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-35 Score=346.10 Aligned_cols=255 Identities=27% Similarity=0.361 Sum_probs=207.0
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc--chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG--GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
-+|....+||.|.||.||.|...++|...|+|-++..+.. ..+...+|..++..++|||+|+++|+... .+..
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvH-----Rekv 1309 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVH-----REKV 1309 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeec-----HHHH
Confidence 4677788999999999999999999999999988765433 34678899999999999999999998543 3677
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
++.||||++|+|.+.++..+. .++.....+..|++.|++|||++ |||||||||.||+++.+|.+|.+|||.
T Consensus 1310 ~IFMEyC~~GsLa~ll~~gri------~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGs 1380 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEHGRI------EDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGS 1380 (1509)
T ss_pred HHHHHHhccCcHHHHHHhcch------hhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccc
Confidence 899999999999999987653 66777778999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCCC---CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG---EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 935 (1009)
|..+... ..+.+....+..||+.|||||++.+. ....++||||+|||+.||+||++||..++.+...+.+...
T Consensus 1381 a~ki~~~----~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~ 1456 (1509)
T KOG4645|consen 1381 AVKIKNN----AQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAA 1456 (1509)
T ss_pred eeEecCc----hhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhc
Confidence 9988654 11233455678899999999998774 3577999999999999999999999877666444444332
Q ss_pred HhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 936 RALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 936 ~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
...|+- | ...-.+=.+++.+|+..||+.|.++.|+++.
T Consensus 1457 gh~Pq~------------P-----------~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1457 GHKPQI------------P-----------ERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred cCCCCC------------c-----------hhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 221111 0 0112234588899999999999999887653
No 253
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.8e-33 Score=306.75 Aligned_cols=249 Identities=22% Similarity=0.307 Sum_probs=200.9
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc-ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ-KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
..|+..+.||+|+||.||+|.+..++..||+|+++... ......+.+|++++++++||||+++++++... ...+
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 78 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKG-----TKLW 78 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC-----CEEE
Confidence 35777889999999999999998889999999987543 22346788999999999999999999987643 6789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+||||+++|+|.+++... .+++.+...++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++
T Consensus 79 lv~e~~~~~~L~~~i~~~-------~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~ 148 (277)
T cd06640 79 IIMEYLGGGSALDLLRAG-------PFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVA 148 (277)
T ss_pred EEEecCCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccc
Confidence 999999999999998753 278889999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhcc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
....... .......++..|+|||++.+..++.++|||||||++|||++|+.||...... ....
T Consensus 149 ~~~~~~~--------~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-----~~~~---- 211 (277)
T cd06640 149 GQLTDTQ--------IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM-----RVLF---- 211 (277)
T ss_pred eeccCCc--------cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH-----hHhh----
Confidence 7654321 1112245788999999999889999999999999999999999998643211 1000
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
.+..... ......++..+.+++.+||+.+|++||++.|++..
T Consensus 212 -----~~~~~~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 212 -----LIPKNNP----------PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred -----hhhcCCC----------CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 0000000 01112345678899999999999999999999765
No 254
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=6.7e-34 Score=312.65 Aligned_cols=269 Identities=25% Similarity=0.280 Sum_probs=205.7
Q ss_pred cCHHHHHHHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhc-CCCCcceEEeeeec
Q 047768 691 VSYKELSKATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSI-RHRNLIKIVTICSS 769 (1009)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 769 (1009)
+...++..+.++|.+.+.||+|+||.||+|..+.+++.+|+|++.... .....+.+|+.+++++ +|||++++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 334455556789999999999999999999998899999999985432 2346778899999999 89999999999875
Q ss_pred cccCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCC
Q 047768 770 IDFKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDM 849 (1009)
Q Consensus 770 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~ 849 (1009)
.+.......++|+||+++++|.++++..... ...+++..++.++.|++.|+.|||+. +++||||||+||+++.++
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~ 165 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLIC--GQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEG 165 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCC
Confidence 4333345789999999999999988642211 12488999999999999999999998 999999999999999999
Q ss_pred ceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCC-----CCCCcccchHHHHHHHHHHhCCCCCcccc
Q 047768 850 VAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-----EASMRGGVYSYGILLLEIFTRRRPTESMF 924 (1009)
Q Consensus 850 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwS~Gvvl~elltg~~p~~~~~ 924 (1009)
.+||+|||+++....... ......|+..|+|||++... .++.++|||||||++|||++|+.||....
T Consensus 166 ~~kl~dfg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~ 237 (291)
T cd06639 166 GVKLVDFGVSAQLTSTRL--------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMH 237 (291)
T ss_pred CEEEeecccchhcccccc--------cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCc
Confidence 999999999986543211 11234578899999987543 36899999999999999999999987432
Q ss_pred cCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 925 NEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.. .... ....... +.+. ........+.+++.+|++.+|++||++.|+++
T Consensus 238 ~~----~~~~-~~~~~~~-----~~~~------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 238 PV----KTLF-KIPRNPP-----PTLL------------HPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HH----HHHH-HHhcCCC-----CCCC------------cccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11 1110 0000000 0000 01123345889999999999999999999975
No 255
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2.4e-33 Score=305.35 Aligned_cols=265 Identities=24% Similarity=0.364 Sum_probs=200.1
Q ss_pred CccCCcccccCCceEEEEEEec---CCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCC-Cc
Q 047768 703 FSSSNTIGRGSFGFVYKGVLHE---NGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKG-VD 776 (1009)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~-~~ 776 (1009)
|.+.+.||+|+||+||+|.+.. ++..||||+++.... ...+.+.+|++++++++||||+++++++......+ ..
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 5677899999999999998753 468999999865432 23457889999999999999999999875432111 12
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
..++++||+.+|+|.+++...........+++.....++.|++.|++|||+. +|+||||||+||+++.++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 3578999999999999876432221223478999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHH
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 935 (1009)
|.++........ .......++..|++||.+.+..++.++|||||||++|||++ |+.||..... .....
T Consensus 158 g~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~-----~~~~~ 226 (273)
T cd05074 158 GLSKKIYSGDYY------RQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN-----SEIYN 226 (273)
T ss_pred cccccccCCcce------ecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH-----HHHHH
Confidence 999866432110 11112345678999999999999999999999999999999 8888864321 11111
Q ss_pred HhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 047768 936 RALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHA 1000 (1009)
Q Consensus 936 ~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i 1000 (1009)
... ....... ...+...+.+++.+|++.+|++||++.|+++.|+++
T Consensus 227 ~~~--------~~~~~~~-----------~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 227 YLI--------KGNRLKQ-----------PPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred HHH--------cCCcCCC-----------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 000 0000000 012335688999999999999999999999999876
No 256
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.9e-33 Score=304.65 Aligned_cols=254 Identities=20% Similarity=0.311 Sum_probs=194.8
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc-----cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCC
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-----GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 775 (1009)
.+|...+.||+|+||.||+|....+++.||+|+++.... ...+.+.+|+.++++++||||+++++++... ..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~ 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDR---AE 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcC---CC
Confidence 368889999999999999999988899999999864321 1234688899999999999999999986532 23
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
...++++||+++++|.+++.... .+++...+.++.|++.|++|||+. +|+||||+|+||+++.++.+||+|
T Consensus 79 ~~~~l~~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~d 149 (266)
T cd06651 79 KTLTIFMEYMPGGSVKDQLKAYG------ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGD 149 (266)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEcc
Confidence 56789999999999999997654 278899999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 935 (1009)
||+++....... .........++..|+|||++.+..++.++|||||||++|||++|+.||..... .....
T Consensus 150 fg~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~----~~~~~- 219 (266)
T cd06651 150 FGASKRLQTICM-----SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA----MAAIF- 219 (266)
T ss_pred CCCccccccccc-----cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch----HHHHH-
Confidence 999986543210 00111234578999999999998999999999999999999999999874311 11111
Q ss_pred HhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 936 RALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 936 ~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
...... ..+.+ +....+.+.+++ +||..+|++||+++||++
T Consensus 220 ~~~~~~----~~~~~--------------~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 220 KIATQP----TNPQL--------------PSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred HHhcCC----CCCCC--------------chhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 000000 00000 011122344554 788899999999999975
No 257
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.8e-33 Score=308.45 Aligned_cols=266 Identities=21% Similarity=0.286 Sum_probs=196.5
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
+|++.+.||+|++|.||+|..+.++..||||+++.... ...+.+.+|+.++++++|||++++++++.. ....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQ-----ESRLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEee-----CCeEE
Confidence 47788999999999999999988899999999865432 234678899999999999999999999754 36789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+||||++ ++|.+++...... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 76 ~v~e~~~-~~l~~~~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 148 (285)
T cd07861 76 LIFEFLS-MDLKKYLDSLPKG---QYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLA 148 (285)
T ss_pred EEEecCC-CCHHHHHhcCCCC---CcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccce
Confidence 9999997 6899988754321 2489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
....... .......+++.|+|||++.+. .++.++|||||||++|||+||+.||....... ..........
T Consensus 149 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~-~~~~~~~~~~ 219 (285)
T cd07861 149 RAFGIPV--------RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID-QLFRIFRILG 219 (285)
T ss_pred eecCCCc--------ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhC
Confidence 7543211 111223568899999987654 57899999999999999999999986432111 0000000000
Q ss_pred c--c----------hhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 939 P--E----------KVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 939 ~--~----------~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
. + .....++........ ........++.+++.+|++.||++|||+.||+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 220 TPTEDVWPGVTSLPDYKNTFPKWKKGSLR-------SAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred CCChhhhhcchhhHHHHhhccccCcchhH-------HhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0 0 000000000000000 000112345679999999999999999999875
No 258
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2.1e-33 Score=312.93 Aligned_cols=203 Identities=23% Similarity=0.321 Sum_probs=162.5
Q ss_pred CCcccccCCceEEEEEEec--CCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEe
Q 047768 706 SNTIGRGSFGFVYKGVLHE--NGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYE 783 (1009)
Q Consensus 706 ~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 783 (1009)
..+||+|+||+||+|+.+. ++..||+|.++... ....+.+|++++++++||||+++++++... .....++|+|
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---~~~~~~lv~e 80 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSH---SDRKVWLLFD 80 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEecc---CCCeEEEEEe
Confidence 3679999999999999763 56789999885432 345678999999999999999999987542 3356799999
Q ss_pred ccCCCCHHHHHhccCCC---CCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceee----CCCCceEEecc
Q 047768 784 YMQNGSLEEWLHQRDDQ---LGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLL----DHDMVAHVSDF 856 (1009)
Q Consensus 784 ~~~~gsL~~~l~~~~~~---~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill----~~~~~~kl~Df 856 (1009)
|++ ++|.+++...... .....+++..++.++.|++.||.|||+. +|+||||||+||++ +.++.+||+||
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07867 81 YAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred eeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeec
Confidence 986 5888887543211 1123488999999999999999999999 99999999999999 56789999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcc
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTES 922 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~ 922 (1009)
|+++....... .........||+.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus 157 G~a~~~~~~~~-----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 157 GFARLFNSPLK-----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred cceeccCCCcc-----cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 99987653211 1112234568999999999876 4579999999999999999999999964
No 259
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.4e-33 Score=304.93 Aligned_cols=255 Identities=27% Similarity=0.465 Sum_probs=201.8
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
.++|.+.+.||+|+||.||+|... +++.||||.++... ...+.+.+|+.++++++|+|++++++++.. ....+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 77 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSE-----EEPIY 77 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeec-----CCceE
Confidence 468999999999999999999976 56789999986433 245679999999999999999999998654 25689
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+||||+++++|.+++..... ..+++.++..++.+++.|+.|||+. +++||||||+||++++++.+|++|||.+
T Consensus 78 ~v~e~~~~~~L~~~i~~~~~----~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~ 150 (261)
T cd05034 78 IVTEYMSKGSLLDFLKSGEG----KKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLA 150 (261)
T ss_pred EEEeccCCCCHHHHHhcccc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccc
Confidence 99999999999999987542 2489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
+....... .......++..|+|||.+.+..++.++||||+|+++||+++ |+.||..... .......
T Consensus 151 ~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-----~~~~~~~- 217 (261)
T cd05034 151 RLIEDDEY-------TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN-----REVLEQV- 217 (261)
T ss_pred eeccchhh-------hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHH-
Confidence 86643210 11112334678999999999899999999999999999999 9999864321 1111110
Q ss_pred cchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 047768 939 PEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCH 999 (1009)
Q Consensus 939 ~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~ 999 (1009)
....-...+ ...+.++.+++.+|++.+|++||+++|+.+.|+.
T Consensus 218 -------~~~~~~~~~-----------~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 218 -------ERGYRMPRP-----------PNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred -------HcCCCCCCC-----------CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 000000000 1123467899999999999999999999988864
No 260
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.6e-33 Score=302.53 Aligned_cols=248 Identities=28% Similarity=0.426 Sum_probs=195.1
Q ss_pred CcccccCCceEEEEEEecCCeEEEEEEeeccccc-chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEecc
Q 047768 707 NTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG-GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYEYM 785 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 785 (1009)
++||+|+||.||+|.+.. ++.||+|+++..... ..+.+.+|++++++++|+||+++++++... ...++|+||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~~v~e~~ 74 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQK-----QPIYIVMELV 74 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecC-----CCeEEEEEcC
Confidence 469999999999999876 999999998654333 346789999999999999999999986543 6789999999
Q ss_pred CCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccCCC
Q 047768 786 QNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSAS 865 (1009)
Q Consensus 786 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 865 (1009)
++++|.+++..... .+++..+..++.+++.|++|||++ +++||||+|+||+++.++.+||+|||+++.....
T Consensus 75 ~~~~l~~~l~~~~~-----~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 146 (251)
T cd05041 75 PGGSLLTFLRKKKN-----RLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGG 146 (251)
T ss_pred CCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCC
Confidence 99999999976443 378999999999999999999999 9999999999999999999999999999865422
Q ss_pred CCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhccchhhh
Q 047768 866 PLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRALPEKVME 944 (1009)
Q Consensus 866 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 944 (1009)
... .......++..|+|||++.++.++.++|||||||++|||+| |..||...... ....
T Consensus 147 ~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~-----~~~~--------- 206 (251)
T cd05041 147 IYT------VSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ-----QTRE--------- 206 (251)
T ss_pred cce------eccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH-----HHHH---------
Confidence 110 01111234667999999998999999999999999999999 88888643211 1110
Q ss_pred ccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 047768 945 IVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLC 998 (1009)
Q Consensus 945 ~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~ 998 (1009)
.+....... .....+.++.+++.+|+..+|++|||+.|+++.|.
T Consensus 207 ~~~~~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 207 RIESGYRMP----------APQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHhcCCCCC----------CCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 010000000 01123446889999999999999999999999885
No 261
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=3e-33 Score=303.74 Aligned_cols=257 Identities=22% Similarity=0.305 Sum_probs=186.6
Q ss_pred CcccccCCceEEEEEEec--CCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEe
Q 047768 707 NTIGRGSFGFVYKGVLHE--NGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYE 783 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 783 (1009)
+.||+|+||+||+|.... ....+|+|.+..... .....+.+|++.++.++|+||+++++++... ...++|||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~-----~~~~lv~e 75 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIES-----IPYLLVLE 75 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCC-----CceEEEEE
Confidence 359999999999997642 345788888754322 2235688999999999999999999987543 67899999
Q ss_pred ccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccC
Q 047768 784 YMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLS 863 (1009)
Q Consensus 784 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~ 863 (1009)
|+++|+|.+++....... ....++.....++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 76 ~~~~g~L~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 151 (269)
T cd05042 76 FCPLGDLKNYLRSNRGMV-AQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQY 151 (269)
T ss_pred eCCCCcHHHHHHhccccc-cccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccc
Confidence 999999999997754321 12256778889999999999999999 99999999999999999999999999987543
Q ss_pred CCCCCCccccCCccccccccccccCccccC-------CCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHH
Q 047768 864 ASPLGNVVETPSSSIGVKGTIGYVAPEYGL-------GGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 935 (1009)
..... .......++..|+|||+.. ...++.++|||||||++|||++ |..||...... ....
T Consensus 152 ~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-----~~~~ 220 (269)
T cd05042 152 PEDYY------ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE-----QVLK 220 (269)
T ss_pred cchhe------eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH-----HHHH
Confidence 32110 0112234677899999864 3456889999999999999999 77888643211 1111
Q ss_pred HhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 047768 936 RALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLC 998 (1009)
Q Consensus 936 ~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~ 998 (1009)
.........+.++.+ ...+...+.+++..|| .||++|||++||++.|.
T Consensus 221 ~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 221 QVVREQDIKLPKPQL--------------DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred HHhhccCccCCCCcc--------------cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 111111111111111 1123345667888898 49999999999998873
No 262
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.7e-33 Score=305.91 Aligned_cols=264 Identities=24% Similarity=0.262 Sum_probs=202.6
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
++|...+.||.|++|.||+|.+..+++.||+|.+..... .....+.+|++++++++||||+++++++... .....+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDE---SSSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEcc---CCCeEE
Confidence 367788999999999999999988899999999864432 2346789999999999999999999987542 235679
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+||||+++++|.+++...... ...+++..+..++.|++.|++|||+. +++|+||+|+||++++++.++|+|||++
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~--~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~ 152 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKKR--GGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVS 152 (287)
T ss_pred EEEEecCCCCHHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccc
Confidence 999999999999987643221 12478899999999999999999999 9999999999999999999999999998
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhcc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
....... .....++..|+|||.+.+..++.++||||+||++|||++|+.||...........+.......
T Consensus 153 ~~~~~~~----------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 222 (287)
T cd06621 153 GELVNSL----------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN 222 (287)
T ss_pred ccccccc----------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc
Confidence 7553221 112356889999999999999999999999999999999999997542211111111111100
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
... +.+...+ .....+..++.+++.+|++.+|++|||+.|+++
T Consensus 223 ~~~-----~~~~~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 223 MPN-----PELKDEP--------GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred CCc-----hhhccCC--------CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 000 0000000 001124457889999999999999999999987
No 263
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1e-33 Score=323.52 Aligned_cols=268 Identities=21% Similarity=0.222 Sum_probs=196.6
Q ss_pred hccCccCCcccccCCceEEEEEEe--cCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLH--ENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
..+|.+.+.||+|+||.||+|... ..++.||||.+... +...+|++++++++||||+++++++.. ...
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~-----~~~ 160 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRW-----KST 160 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEee-----CCE
Confidence 357999999999999999999864 34678999987432 345689999999999999999988654 367
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++|||++. ++|.+++.... .+++.+++.++.|++.||.|||++ +||||||||+||+++.++.+||+|||
T Consensus 161 ~~lv~e~~~-~~l~~~l~~~~------~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG 230 (392)
T PHA03207 161 VCMVMPKYK-CDLFTYVDRSG------PLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFG 230 (392)
T ss_pred EEEEehhcC-CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCc
Confidence 899999995 68999985433 389999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCC--ccHHHHHH
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEG--LTLHEFAK 935 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~--~~~~~~~~ 935 (1009)
+++....... ........||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+.....
T Consensus 231 ~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~ 304 (392)
T PHA03207 231 AACKLDAHPD------TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIR 304 (392)
T ss_pred cccccCcccc------cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHH
Confidence 9986654321 112234679999999999999999999999999999999999999986533221 11111111
Q ss_pred Hhc--cchh--------hhccCCCCCChhhhhhhc---cccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 936 RAL--PEKV--------MEIVDPSLLPLEEERTNS---RRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 936 ~~~--~~~~--------~~~~d~~l~~~~~~r~~~---~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
... +... ...+.... ...|+.. ..........++.+++.+|+..||++|||+.|++..
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 305 CMQVHPLEFPQNGSTNLCKHFKQYA---IVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HhccCccccCCccchhHHHHHHhhc---ccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 110 0000 00000000 0000000 000001123456788999999999999999999864
No 264
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.1e-33 Score=307.23 Aligned_cols=254 Identities=27% Similarity=0.423 Sum_probs=195.1
Q ss_pred CcccccCCceEEEEEEecCC------eEEEEEEeeccc-ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 707 NTIGRGSFGFVYKGVLHENG------MLVAVKVINLEQ-KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
+.||+|+||.||+|+++... +.||||.+.... ......+.+|++++++++||||+++++++... ...+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLN-----EPQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCC-----CCeE
Confidence 36999999999999986433 689999885432 23356788999999999999999999987543 5689
Q ss_pred EEEeccCCCCHHHHHhccCCCC-CccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCC-----ceEE
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQL-GICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDM-----VAHV 853 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~-----~~kl 853 (1009)
+||||+++++|.+++....... ....+++.++..++.|++.|++|||+. +++|+||||+||+++.++ .+|+
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l 152 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKI 152 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEE
Confidence 9999999999999997643221 223478999999999999999999998 999999999999999887 8999
Q ss_pred eccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHH
Q 047768 854 SDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHE 932 (1009)
Q Consensus 854 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~ 932 (1009)
+|||+++........ .......++..|+|||++.++.++.++|||||||++|||++ |+.||...... .
T Consensus 153 ~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~-----~ 221 (269)
T cd05044 153 GDFGLARDIYKSDYY------RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ-----E 221 (269)
T ss_pred CCccccccccccccc------ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH-----H
Confidence 999999765432111 11112345778999999999999999999999999999998 99998643211 1
Q ss_pred HHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 047768 933 FAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLC 998 (1009)
Q Consensus 933 ~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~ 998 (1009)
....... ..... .....+..+.+++.+|+..+|.+||++.++.+.|+
T Consensus 222 ~~~~~~~--------~~~~~-----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 222 VLQHVTA--------GGRLQ-----------KPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred HHHHHhc--------CCccC-----------CcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 1110000 00000 01123456789999999999999999999999886
No 265
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.1e-33 Score=304.27 Aligned_cols=247 Identities=32% Similarity=0.457 Sum_probs=196.5
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
++|++.+.||+|+||.||+|.. +++.||+|+++... ....+.+|+.++++++|||++++++++.. ...++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~------~~~~~ 75 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH------NGLYI 75 (254)
T ss_pred HHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC------CCcEE
Confidence 4688899999999999999975 58889999986432 34678899999999999999999998643 34689
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
||||+++++|.+++..... ..+++..+..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||+++
T Consensus 76 v~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~ 148 (254)
T cd05083 76 VMELMSKGNLVNFLRTRGR----ALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLAR 148 (254)
T ss_pred EEECCCCCCHHHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccce
Confidence 9999999999999976542 2478999999999999999999998 99999999999999999999999999987
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhcc
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
...... .....+..|+|||++.+..++.++|||||||++|||++ |+.||..... .+....
T Consensus 149 ~~~~~~-----------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~~~~--- 209 (254)
T cd05083 149 VGSMGV-----------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL-----KEVKEC--- 209 (254)
T ss_pred eccccC-----------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH-----HHHHHH---
Confidence 543211 11234568999999998999999999999999999998 8999864321 111111
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCH 999 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~ 999 (1009)
+.......+ ...++..+.+++.+|++.+|+.||+++++++.|++
T Consensus 210 ------~~~~~~~~~----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 210 ------VEKGYRMEP----------PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred ------HhCCCCCCC----------CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 111110000 11234567899999999999999999999998763
No 266
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.1e-33 Score=309.38 Aligned_cols=265 Identities=22% Similarity=0.315 Sum_probs=204.3
Q ss_pred CHHHHHHHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhc-CCCCcceEEeeeecc
Q 047768 692 SYKELSKATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSI-RHRNLIKIVTICSSI 770 (1009)
Q Consensus 692 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 770 (1009)
+..+.....+.|++.+.+|+|+||.||+|.+..+++.||+|++..... ....+..|+.+++++ +|+|++++++++...
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTED-EEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChH-HHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 344555567889999999999999999999998999999999865432 345688899999998 799999999987542
Q ss_pred cc-CCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCC
Q 047768 771 DF-KGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDM 849 (1009)
Q Consensus 771 ~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~ 849 (1009)
.. ......+++|||+++|+|.+++...... .+++..+..++.|++.|++|||+. +|+||||+|+||++++++
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~----~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~ 158 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGN----ALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENA 158 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccCC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCC
Confidence 21 1246789999999999999999764422 378888999999999999999999 999999999999999999
Q ss_pred ceEEeccccccccCCCCCCCccccCCccccccccccccCccccC-----CCCCCCcccchHHHHHHHHHHhCCCCCcccc
Q 047768 850 VAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGL-----GGEASMRGGVYSYGILLLEIFTRRRPTESMF 924 (1009)
Q Consensus 850 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~ 924 (1009)
.++|+|||+++...... .......|+..|+|||.+. +..++.++|||||||++|||++|+.||....
T Consensus 159 ~~~l~dfg~~~~~~~~~--------~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~ 230 (282)
T cd06636 159 EVKLVDFGVSAQLDRTV--------GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMH 230 (282)
T ss_pred CEEEeeCcchhhhhccc--------cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccC
Confidence 99999999987553211 1122356889999999875 3567889999999999999999999986432
Q ss_pred cCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 925 NEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.. ..... ....... ......+...+.+++.+||+.||.+||++.|+++
T Consensus 231 ~~----~~~~~------~~~~~~~-------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 231 PM----RALFL------IPRNPPP-------------KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred HH----hhhhh------HhhCCCC-------------CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 11 10000 0000000 0011123456889999999999999999999875
No 267
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=3.5e-33 Score=306.22 Aligned_cols=270 Identities=22% Similarity=0.321 Sum_probs=198.9
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
++|++.+.||+|+||.||+|+++.+++.||+|++..... ...+.+.+|++++++++|+|++++++++.. ....
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~ 75 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRR-----KRKL 75 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEee-----CCEE
Confidence 368889999999999999999998899999999864322 223568899999999999999999998654 3678
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
++||||++++++..+..... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+
T Consensus 76 ~~v~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 146 (286)
T cd07847 76 HLVFEYCDHTVLNELEKNPR------GVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGF 146 (286)
T ss_pred EEEEeccCccHHHHHHhCCC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECcccc
Confidence 99999999988888765433 289999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
+........ ......++..|+|||++.+ ..++.++||||||+++|||++|+.||......+ ..... ...
T Consensus 147 ~~~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~-~~~~~-~~~ 216 (286)
T cd07847 147 ARILTGPGD--------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVD-QLYLI-RKT 216 (286)
T ss_pred ceecCCCcc--------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHH-HHHHH-HHH
Confidence 987644211 1122457889999999876 557899999999999999999999997433211 11111 111
Q ss_pred cc---chhhhccCC------CCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 938 LP---EKVMEIVDP------SLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 938 ~~---~~~~~~~d~------~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.. ....+..+. ...+.+....... .........+.+++.+|++.+|++||++.|++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 217 LGDLIPRHQQIFSTNQFFKGLSIPEPETREPLE-SKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred hCCCChHHhhhcccccccccccCCCcccccCHH-HHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 00 000011100 0000000000000 000112356789999999999999999999875
No 268
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=5.6e-33 Score=301.24 Aligned_cols=255 Identities=22% Similarity=0.326 Sum_probs=185.8
Q ss_pred CcccccCCceEEEEEEecC--CeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEe
Q 047768 707 NTIGRGSFGFVYKGVLHEN--GMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYE 783 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~--~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 783 (1009)
+.||+|+||.||+|+...+ ...+++|.++.... ...+.+.+|+.+++.++||||++++++|... ...++|||
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~-----~~~~lv~e 75 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEA-----IPYLLVFE 75 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCC-----CccEEEEe
Confidence 3599999999999986532 23566777654322 2356889999999999999999999987643 56799999
Q ss_pred ccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccC
Q 047768 784 YMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLS 863 (1009)
Q Consensus 784 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~ 863 (1009)
|+++|+|.+++++.... ....++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 76 ~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~ 150 (268)
T cd05086 76 YCELGDLKSYLSQEQWH--RRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRY 150 (268)
T ss_pred cCCCCcHHHHHHhhhcc--cccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccC
Confidence 99999999999864321 12367778889999999999999998 99999999999999999999999999986432
Q ss_pred CCCCCCccccCCccccccccccccCccccCC-------CCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHH
Q 047768 864 ASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-------GEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 935 (1009)
.... ........|+..|+|||++.. ..++.++|||||||++|||++ |..||..... .+...
T Consensus 151 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-----~~~~~ 219 (268)
T cd05086 151 KEDY------IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD-----REVLN 219 (268)
T ss_pred cchh------hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH-----HHHHH
Confidence 2110 011123467889999998753 345789999999999999997 5667753321 11222
Q ss_pred HhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 047768 936 RALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKL 997 (1009)
Q Consensus 936 ~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L 997 (1009)
....+....+.++.+.. .....+.+++..|| .+|++||+++||++.|
T Consensus 220 ~~~~~~~~~~~~~~~~~--------------~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 220 HVIKDQQVKLFKPQLEL--------------PYSERWYEVLQFCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred HHHhhcccccCCCccCC--------------CCcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence 11112222222222211 12234667888999 5799999999998876
No 269
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-34 Score=293.74 Aligned_cols=273 Identities=20% Similarity=0.304 Sum_probs=216.4
Q ss_pred HHHHHHhccCccCCcccccCCceEEEEEEecCC-----eEEEEEEeeccccc-chHHHHHHHHHHHhcCCCCcceEEeee
Q 047768 694 KELSKATNEFSSSNTIGRGSFGFVYKGVLHENG-----MLVAVKVINLEQKG-GSKSFAAECEALRSIRHRNLIKIVTIC 767 (1009)
Q Consensus 694 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~ 767 (1009)
+++.....+++....+.+|.||.||.|.|++.+ +.|-||.++....+ ....+..|.-.+..+.|||+..+.+++
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 344455566777788999999999999987543 34566766433222 235677888889999999999999998
Q ss_pred eccccCCCceEEEEEeccCCCCHHHHHhccC--CCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceee
Q 047768 768 SSIDFKGVDFKALVYEYMQNGSLEEWLHQRD--DQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLL 845 (1009)
Q Consensus 768 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill 845 (1009)
.+ +...+++++.++.-|+|..|+...+ +......++..+...++.|++.|++|||++ +|||.||.++|++|
T Consensus 357 ie----~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvI 429 (563)
T KOG1024|consen 357 IE----DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVI 429 (563)
T ss_pred ee----ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhccee
Confidence 65 3467799999999999999998433 222345688899999999999999999999 99999999999999
Q ss_pred CCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccc
Q 047768 846 DHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMF 924 (1009)
Q Consensus 846 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~ 924 (1009)
|+..+||++|=.++|.+.+.++....+. ...+..||+||.+.+..|+.++|||||||++|||+| |+.|+...+
T Consensus 430 dd~LqVkltDsaLSRDLFP~DYhcLGDn------EnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeID 503 (563)
T KOG1024|consen 430 DDQLQVKLTDSALSRDLFPGDYHCLGDN------ENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEID 503 (563)
T ss_pred hhheeEEeccchhccccCcccccccCCC------CCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccC
Confidence 9999999999999999998876544333 335789999999999999999999999999999999 999987542
Q ss_pred cCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 047768 925 NEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQN 1003 (1009)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~~ 1003 (1009)
.. .+..+ +.|. .+...+..|+++++.+|..||..+|++||+++|++.-|.+....
T Consensus 504 Pf--Em~~y-----------lkdG-----------yRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~q 558 (563)
T KOG1024|consen 504 PF--EMEHY-----------LKDG-----------YRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQ 558 (563)
T ss_pred HH--HHHHH-----------Hhcc-----------ceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence 21 11111 1111 11234457899999999999999999999999999988876644
No 270
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2e-33 Score=308.93 Aligned_cols=274 Identities=22% Similarity=0.322 Sum_probs=197.7
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc-chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG-GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
.++|++.+.||+|++|.||+|..+.+++.||||.+...... ....+.+|++++++++|+||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~ 78 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHT-----KKTL 78 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEec-----CCeE
Confidence 35788999999999999999999888999999998654322 23567789999999999999999998654 3678
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
++||||+. ++|.+++..... .+++..++.++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~-~~L~~~~~~~~~-----~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~ 149 (291)
T cd07844 79 TLVFEYLD-TDLKQYMDDCGG-----GLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGL 149 (291)
T ss_pred EEEEecCC-CCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECcccc
Confidence 99999997 599999876543 388999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
++...... .......++..|+|||+..+ ..++.++||||+|+++|||++|+.||.................
T Consensus 150 ~~~~~~~~--------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~ 221 (291)
T cd07844 150 ARAKSVPS--------KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVL 221 (291)
T ss_pred ccccCCCC--------ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhc
Confidence 87543211 11112346789999998765 4578999999999999999999999964321111111111100
Q ss_pred ---ccchhhhccCC-----CCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 938 ---LPEKVMEIVDP-----SLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 938 ---~~~~~~~~~d~-----~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.++......+. ........+..............+.+++.+|++.+|++|||+.|+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 222 GTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred CCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 00000000000 00000000000000001111245679999999999999999999875
No 271
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-34 Score=316.99 Aligned_cols=285 Identities=25% Similarity=0.287 Sum_probs=206.7
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc-ccchHHHHHHHHHHHhcCCCCcceEEeeeeccc-cCCCceEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ-KGGSKSFAAECEALRSIRHRNLIKIVTICSSID-FKGVDFKA 779 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~~~~ 779 (1009)
.|...+.||+|+||.||+|+++++|+.||||.++... ....+...+|+++|++++|+|||+++++-.... ........
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 3455678999999999999999999999999997543 233567789999999999999999999854431 11145678
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeC--CCC--ceEEec
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLD--HDM--VAHVSD 855 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~--~~~--~~kl~D 855 (1009)
+|||||.+|||+..+.+-... ..+++.+.+.+..+++.||.|||++ +||||||||.||++- ++| .-||+|
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~---~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtD 167 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENA---YGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTD 167 (732)
T ss_pred EEEeecCCCcHHHHhcCcccc---cCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeec
Confidence 999999999999999865432 3499999999999999999999999 999999999999983 434 579999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccC-CCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHH
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGL-GGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFA 934 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 934 (1009)
||.|+.+++. .......||..|.+||... .+.|+..+|.|||||++||.+||..||....... ...+..
T Consensus 168 fG~Arel~d~---------s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk-~~~~~~ 237 (732)
T KOG4250|consen 168 FGAARELDDN---------SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPK-NNKEIM 237 (732)
T ss_pred ccccccCCCC---------CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCcc-ccchhh
Confidence 9999988764 2445688999999999988 4888999999999999999999999997544332 111111
Q ss_pred HH---hccchhhhccCCCCCChhhhh--hhccccccHHHHHHHHHHHhhccCCCCCCCC--CHHHHHHHHHHHHH
Q 047768 935 KR---ALPEKVMEIVDPSLLPLEEER--TNSRRVRNEECLVAVIKTGVACSIESPFDRM--EMTDVVVKLCHARQ 1002 (1009)
Q Consensus 935 ~~---~~~~~~~~~~d~~l~~~~~~r--~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rp--t~~evl~~L~~i~~ 1002 (1009)
.. ..+..+....++...+..+.. .+............+-+....++..+|++|- ...+....+..|..
T Consensus 238 ~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~ 312 (732)
T KOG4250|consen 238 WHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILN 312 (732)
T ss_pred hhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence 11 112222222221111100000 0001112223334455666677778888888 66676666666654
No 272
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2e-33 Score=308.04 Aligned_cols=255 Identities=22% Similarity=0.292 Sum_probs=197.9
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
++|++.+.||+|+||.||+|.+..+++.||+|.++.... .....+.+|++++++++||||+++++++.. ....+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~ 75 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFI-----EGAVY 75 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheec-----CCeEE
Confidence 368889999999999999999988999999999865422 224578899999999999999999998654 36789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+|+||+++++|.+++..... ...+++..+..++.+++.|+.|||+.+ +|+||||||+||+++.++.+|++|||++
T Consensus 76 lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~ 150 (286)
T cd06622 76 MCMEYMDAGSLDKLYAGGVA---TEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVS 150 (286)
T ss_pred EEEeecCCCCHHHHHHhccc---cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCc
Confidence 99999999999999876421 124899999999999999999999632 8999999999999999999999999998
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCC------CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHH
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG------EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEF 933 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~ 933 (1009)
...... ......++..|+|||.+.+. .++.++|||||||++|||++|+.||...... .....
T Consensus 151 ~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~ 218 (286)
T cd06622 151 GNLVAS----------LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA--NIFAQ 218 (286)
T ss_pred ccccCC----------ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh--hHHHH
Confidence 765321 11123578899999987554 3588999999999999999999999643211 00000
Q ss_pred HHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 934 AKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 934 ~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
...+.+..... ....+..++.+++.+|++.+|++||++++++..
T Consensus 219 --------~~~~~~~~~~~-----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 219 --------LSAIVDGDPPT-----------LPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred --------HHHHhhcCCCC-----------CCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 11111110000 111244567899999999999999999999874
No 273
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=3.1e-33 Score=302.96 Aligned_cols=255 Identities=23% Similarity=0.370 Sum_probs=197.8
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc------chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCC
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG------GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 775 (1009)
+|.+.+.||+|+||+||+|... +++.+|||+++..... ....+.+|++++++++|+||+++++++...
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 74 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD----- 74 (265)
T ss_pred CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC-----
Confidence 4788899999999999999874 7889999998644321 124688999999999999999999997643
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
...++|+||+++++|.+++.+.. .+++..+..++.|++.|++|||+. +|+|+||+|+||++++++.+|++|
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~d 145 (265)
T cd06631 75 NTISIFMEFVPGGSISSILNRFG------PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLID 145 (265)
T ss_pred CeEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEecc
Confidence 78899999999999999997654 278999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 935 (1009)
||++.......... ..........|+..|+|||+..+..++.++|||||||++|||++|+.||...... .....
T Consensus 146 fg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~----~~~~~ 219 (265)
T cd06631 146 FGCARRLAWVGLHG--THSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL----AAMFY 219 (265)
T ss_pred chhhHhhhhccccc--cccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH----HHHHH
Confidence 99998654321110 0111122356899999999999989999999999999999999999999643211 11100
Q ss_pred HhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 936 RALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 936 ~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
..... .. .+.+ ......++.+++.+|++.+|++||++.|++.
T Consensus 220 ~~~~~---~~-~~~~--------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 220 IGAHR---GL-MPRL--------------PDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred hhhcc---CC-CCCC--------------CCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000 00 0000 0123345789999999999999999999874
No 274
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.9e-33 Score=303.54 Aligned_cols=238 Identities=26% Similarity=0.459 Sum_probs=188.6
Q ss_pred CcccccCCceEEEEEEecCC----------eEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCc
Q 047768 707 NTIGRGSFGFVYKGVLHENG----------MLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVD 776 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 776 (1009)
+.||+|+||.||+|.++.++ ..||+|++...... ...+.+|+.++++++||||+++++++.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~ 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR------D 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec------C
Confidence 46999999999999998665 45888887644333 6788999999999999999999998753 3
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCC-------
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDM------- 849 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~------- 849 (1009)
..++|+||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~ 145 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHREKN-----NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVP 145 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCce
Confidence 46899999999999999987653 388999999999999999999998 999999999999999888
Q ss_pred ceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCC--CCCCcccchHHHHHHHHHHh-CCCCCcccccC
Q 047768 850 VAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG--EASMRGGVYSYGILLLEIFT-RRRPTESMFNE 926 (1009)
Q Consensus 850 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~ 926 (1009)
.+|++|||+++..... ....++..|+|||++.+. .++.++|||||||++|||++ |..||......
T Consensus 146 ~~kl~Dfg~a~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~ 213 (259)
T cd05037 146 FIKLSDPGIPITVLSR------------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS 213 (259)
T ss_pred eEEeCCCCcccccccc------------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch
Confidence 7999999999865431 123466789999998876 78999999999999999999 57777543211
Q ss_pred CccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 047768 927 GLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKL 997 (1009)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L 997 (1009)
....+.. .....+. +....+.+++.+|+..+|.+|||+.|+++.|
T Consensus 214 --~~~~~~~-----------~~~~~~~-------------~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 214 --EKERFYQ-----------DQHRLPM-------------PDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred --hHHHHHh-----------cCCCCCC-------------CCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 0011100 0000000 0114678999999999999999999999876
No 275
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=2.2e-33 Score=308.52 Aligned_cols=274 Identities=22% Similarity=0.335 Sum_probs=197.5
Q ss_pred HhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
+.++|.+.+.||+|+||.||+|..+.+++.||+|++..... .....+.+|+++++.++|+||+++++++.. ...
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~-----~~~ 77 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHT-----KET 77 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEec-----CCe
Confidence 35689999999999999999999988899999999865432 223467889999999999999999998654 367
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++|+||+. +++.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 78 ~~lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg 148 (291)
T cd07870 78 LTFVFEYMH-TDLAQYMIQHPG-----GLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFG 148 (291)
T ss_pred EEEEEeccc-CCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccc
Confidence 899999995 788887765432 277888999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHH
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKR 936 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 936 (1009)
+++...... .......++..|+|||++.+. .++.++|||||||++|||++|+.||.........+.+....
T Consensus 149 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~ 220 (291)
T cd07870 149 LARAKSIPS--------QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTV 220 (291)
T ss_pred cccccCCCC--------CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHH
Confidence 997543211 111224568899999998764 57889999999999999999999997543221111111110
Q ss_pred h-ccch-h----h---hccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 937 A-LPEK-V----M---EIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 937 ~-~~~~-~----~---~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
. .+.. . . +............ .....+........+.+++.+|+..||++|||+.|++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 221 LGVPTEDTWPGVSKLPNYKPEWFLPCKPQ-QLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred cCCCChhhhhhhhhcccccchhccccCCc-chhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 0 0000 0 0 0000000000000 00000011112346779999999999999999999874
No 276
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=4.2e-33 Score=300.45 Aligned_cols=251 Identities=24% Similarity=0.355 Sum_probs=196.9
Q ss_pred CcccccCCceEEEEEEec-CC--eEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEE
Q 047768 707 NTIGRGSFGFVYKGVLHE-NG--MLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVY 782 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~-~~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 782 (1009)
+.||+|++|.||+|.+.. .+ ..||||.++.... ...+.+.+|++++++++||||+++++++.. ...++|+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT------HPLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC------CeEEEEE
Confidence 468999999999999864 33 3699999976544 445688999999999999999999998643 5679999
Q ss_pred eccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccccc
Q 047768 783 EYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 862 (1009)
Q Consensus 783 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~ 862 (1009)
||+++++|.+++..... ..+++..++.++.|++.||+|||+. +++||||+|+||+++.++.+||+|||+++..
T Consensus 75 e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~ 147 (257)
T cd05040 75 ELAPLGSLLDRLRKDAL----GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRAL 147 (257)
T ss_pred EecCCCcHHHHHHhccc----ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccc
Confidence 99999999999987542 2489999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhccch
Q 047768 863 SASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRALPEK 941 (1009)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 941 (1009)
....... .......++..|+|||++.+..++.++|||||||++|||++ |+.||..... .+.......
T Consensus 148 ~~~~~~~-----~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----~~~~~~~~~-- 215 (257)
T cd05040 148 PQNEDHY-----VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSG-----SQILKKIDK-- 215 (257)
T ss_pred cccccce-----ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHh--
Confidence 5422100 01112456789999999999999999999999999999999 9999863321 111111100
Q ss_pred hhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 047768 942 VMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLC 998 (1009)
Q Consensus 942 ~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~ 998 (1009)
....... ....+..+.+++.+|++.+|++||+++|+++.|.
T Consensus 216 -----~~~~~~~-----------~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 216 -----EGERLER-----------PEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred -----cCCcCCC-----------CccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 0000000 0123356889999999999999999999999875
No 277
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=3.1e-33 Score=301.22 Aligned_cols=251 Identities=20% Similarity=0.315 Sum_probs=200.5
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc--ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ--KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
+|++.+.||+|+||.||++....+++.||+|.+.... ....+.+.+|++++++++||||+++++++.. ....+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEE-----NGNLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecC-----CCeEE
Confidence 4788899999999999999999899999999986542 2234578899999999999999999998643 46889
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+|+||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++
T Consensus 76 lv~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~ 148 (256)
T cd08218 76 IVMDYCEGGDLYKKINAQRG----VLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIA 148 (256)
T ss_pred EEEecCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccce
Confidence 99999999999999976432 1378899999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhcc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
....... .......|++.|+|||+..+..++.++|||||||++|||++|+.||.... ........
T Consensus 149 ~~~~~~~--------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-----~~~~~~~~-- 213 (256)
T cd08218 149 RVLNSTV--------ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN-----MKNLVLKI-- 213 (256)
T ss_pred eecCcch--------hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC-----HHHHHHHH--
Confidence 7654321 11122457889999999999999999999999999999999999986321 11111111
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
........ .......+.+++.+|++.+|++||++.||++.
T Consensus 214 ------~~~~~~~~-----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 214 ------IRGSYPPV-----------SSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred ------hcCCCCCC-----------cccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 11111000 11233467899999999999999999999863
No 278
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-35 Score=315.69 Aligned_cols=251 Identities=22% Similarity=0.313 Sum_probs=204.6
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
+-|.++--||.|+||.||+|+.++++...|-|++.......-..|.-||++|..++||+||++++.|... ...++
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~e-----nkLwi 106 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFE-----NKLWI 106 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhcc-----CceEE
Confidence 3466677799999999999999988888899999776666678899999999999999999999976532 67899
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
+.|||.||-...++-+-+.. +++.++..++++++.||.|||++ .|||||||+.|||++-+|.++++|||.+-
T Consensus 107 liEFC~GGAVDaimlEL~r~-----LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSA 178 (1187)
T KOG0579|consen 107 LIEFCGGGAVDAIMLELGRV-----LTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSA 178 (1187)
T ss_pred EEeecCCchHhHHHHHhccc-----cchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccc
Confidence 99999999999988876654 99999999999999999999999 99999999999999999999999999875
Q ss_pred ccCCCCCCCccccCCccccccccccccCccc-----cCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEY-----GLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~-----~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 935 (1009)
.... +......+.||+.|||||+ +.+.+|+.++||||||+.+.||..+.+|-.... ..+...
T Consensus 179 Kn~~--------t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHheln-----pMRVll 245 (1187)
T KOG0579|consen 179 KNKS--------TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELN-----PMRVLL 245 (1187)
T ss_pred cchh--------HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccc-----hHHHHH
Confidence 4322 1234446899999999997 456789999999999999999999999965321 111111
Q ss_pred H-hccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 936 R-ALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 936 ~-~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
. ..++ . +....+..|...+.++...|+..+|..||+++++++
T Consensus 246 KiaKSe------P------------PTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 246 KIAKSE------P------------PTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred HHhhcC------C------------CcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 1 0000 0 011223456677889999999999999999999875
No 279
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=9.5e-34 Score=317.86 Aligned_cols=279 Identities=21% Similarity=0.253 Sum_probs=203.3
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc-ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ-KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
.++|.+.+.||+|+||.||+|.+..+|+.||||+++... ......+.+|+.++++++|+||+++++++....+......
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 468999999999999999999999899999999986432 2234567889999999999999999998776555555678
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
++|+||+. +++.+++.... +++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~-------l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~ 152 (336)
T cd07849 84 YIVQELME-TDLYKLIKTQH-------LSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGL 152 (336)
T ss_pred EEEehhcc-cCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccc
Confidence 99999996 58888876532 89999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
++....... .........||..|+|||++.+ ..++.++||||+||++|||++|+.||...... .........
T Consensus 153 ~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~--~~~~~~~~~ 225 (336)
T cd07849 153 ARIADPEHD-----HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL--HQLNLILGV 225 (336)
T ss_pred eeecccccc-----ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHH
Confidence 986643221 1112233568999999998655 56899999999999999999999999643211 000001111
Q ss_pred c----cchhhhccCCCCCChhhhhhhcccc----ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 938 L----PEKVMEIVDPSLLPLEEERTNSRRV----RNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 938 ~----~~~~~~~~d~~l~~~~~~r~~~~~~----~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
. ++....+.+..........+..... .......++.+++.+|++.||++|||+.|+++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 226 LGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred cCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1 1111111111110000000000000 000123467899999999999999999999875
No 280
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.8e-33 Score=304.75 Aligned_cols=255 Identities=24% Similarity=0.346 Sum_probs=202.6
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
++|++.+.||+|+||.||+|.++.+++.||+|++..... ...+.+.+|++++++++||||+++++++... ...+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~~ 75 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNN-----GDIS 75 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecC-----CEEE
Confidence 367788999999999999999998899999999865432 3346788999999999999999999986543 7789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhh-cCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHH-HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
+|+||+++++|.+++..... .+++..+..++.|++.|++|||+ . +++||||||+||++++++.+||+|||.
T Consensus 76 lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~ 147 (265)
T cd06605 76 ICMEYMDGGSLDKILKEVQG-----RIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGV 147 (265)
T ss_pred EEEEecCCCcHHHHHHHccC-----CCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 99999999999999987542 38899999999999999999999 7 999999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhc
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
+....... .....++..|+|||+..+..++.++||||||+++|+|++|+.||..................
T Consensus 148 ~~~~~~~~----------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 217 (265)
T cd06605 148 SGQLVNSL----------AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIV 217 (265)
T ss_pred chhhHHHH----------hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHh
Confidence 87553211 11156788999999999999999999999999999999999999754322222222211111
Q ss_pred cchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 939 PEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 939 ~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
.......+ ......++.+++.+|+..+|++|||+.|++..
T Consensus 218 --------~~~~~~~~----------~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 218 --------NEPPPRLP----------SGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred --------cCCCCCCC----------hhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 10000000 01134567899999999999999999999753
No 281
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=5.4e-34 Score=319.01 Aligned_cols=236 Identities=23% Similarity=0.243 Sum_probs=180.8
Q ss_pred ccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHHHHHhc---CCCCcceEEeeeeccccCCCceEEEEE
Q 047768 709 IGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECEALRSI---RHRNLIKIVTICSSIDFKGVDFKALVY 782 (1009)
Q Consensus 709 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~~~~~~lv~ 782 (1009)
||+|+||+||+|+++.+++.||||++..... ........|..++... +||||+++++++.. ....++||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~-----~~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQT-----DSDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEec-----CCeEEEEE
Confidence 6999999999999998999999999864321 1223445566666655 69999999988654 36789999
Q ss_pred eccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccccc
Q 047768 783 EYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 862 (1009)
Q Consensus 783 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~ 862 (1009)
||+++|+|.+++.... .+++..+..++.|+++|++|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~ 146 (330)
T cd05586 76 DYMSGGELFWHLQKEG------RFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKAN 146 (330)
T ss_pred cCCCCChHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCC
Confidence 9999999999987654 388999999999999999999999 9999999999999999999999999998754
Q ss_pred CCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccch
Q 047768 863 SASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEK 941 (1009)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 941 (1009)
.... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||.... ..+.........
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~-----~~~~~~~i~~~~ 213 (330)
T cd05586 147 LTDN--------KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAED-----TQQMYRNIAFGK 213 (330)
T ss_pred CCCC--------CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCC-----HHHHHHHHHcCC
Confidence 3211 112345689999999998764 47999999999999999999999986421 111111111000
Q ss_pred hhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCH
Q 047768 942 VMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEM 990 (1009)
Q Consensus 942 ~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~ 990 (1009)
. ..+. ......+.+++.+|++.||.+||++
T Consensus 214 --------~-~~~~----------~~~~~~~~~li~~~L~~~P~~R~~~ 243 (330)
T cd05586 214 --------V-RFPK----------NVLSDEGRQFVKGLLNRNPQHRLGA 243 (330)
T ss_pred --------C-CCCC----------ccCCHHHHHHHHHHcCCCHHHCCCC
Confidence 0 0000 0112346789999999999999954
No 282
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=4.7e-33 Score=299.90 Aligned_cols=249 Identities=25% Similarity=0.408 Sum_probs=198.1
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc--ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ--KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
+|+..+.||+|+||.||+|....+++.+|||.+.... ......+.+|++++++++|||++++++.+.. ....+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLE-----DKALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEec-----CCEEE
Confidence 4778899999999999999998899999999986542 2234678899999999999999999987543 36789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCC-CceEEecccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGL 858 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~-~~~kl~DfGl 858 (1009)
+|+||+++++|.+++..... ..+++..+..++.+++.|++|||++ +|+||||+|+||+++++ +.+|++|||.
T Consensus 76 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~ 148 (256)
T cd08220 76 IVMEYAPGGTLAEYIQKRCN----SLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGI 148 (256)
T ss_pred EEEecCCCCCHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCC
Confidence 99999999999999986532 2488999999999999999999999 99999999999999865 4689999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhc
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
+....... ......|+..|+|||.+.+..++.++||||||+++|+|++|+.||..... ........
T Consensus 149 ~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~-----~~~~~~~~ 214 (256)
T cd08220 149 SKILSSKS---------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL-----PALVLKIM 214 (256)
T ss_pred ceecCCCc---------cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch-----HHHHHHHH
Confidence 98664321 11234578899999999988899999999999999999999999864321 11111110
Q ss_pred cchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 939 PEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 939 ~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
...... ........+.+++.+||+.+|++|||+.|+++
T Consensus 215 --------~~~~~~-----------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 215 --------SGTFAP-----------ISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred --------hcCCCC-----------CCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 000000 01123345789999999999999999999975
No 283
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.5e-34 Score=334.04 Aligned_cols=267 Identities=23% Similarity=0.290 Sum_probs=197.4
Q ss_pred HHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc-ccchHHHHHHHHHHHhcCCCCcceEEeeeeccc-----
Q 047768 698 KATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ-KGGSKSFAAECEALRSIRHRNLIKIVTICSSID----- 771 (1009)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 771 (1009)
+-..+|+..+.||+||||.||+++.+-+|+.||||++.... ......+.+|+..+++++|||||+++..+.+..
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 34457788899999999999999999999999999997654 223456889999999999999999985431000
Q ss_pred --------------------------------------------------------------------------------
Q 047768 772 -------------------------------------------------------------------------------- 771 (1009)
Q Consensus 772 -------------------------------------------------------------------------------- 771 (1009)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ----------------------cC-------CCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHH
Q 047768 772 ----------------------FK-------GVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAV 822 (1009)
Q Consensus 772 ----------------------~~-------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l 822 (1009)
.. .....|+-||||+.-.+.++++.+... -.....|+++++|+.||
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~-----~~~d~~wrLFreIlEGL 710 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN-----SQRDEAWRLFREILEGL 710 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc-----hhhHHHHHHHHHHHHHH
Confidence 00 013567899999998888888876531 14667899999999999
Q ss_pred HHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccC---------CCCCCCccc-cCCccccccccccccCcccc
Q 047768 823 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLS---------ASPLGNVVE-TPSSSIGVKGTIGYVAPEYG 892 (1009)
Q Consensus 823 ~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~---------~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~ 892 (1009)
+|+|++ |||||||||.||+++++..|||+|||+|+... ......... .....++.+||.-|+|||++
T Consensus 711 aYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll 787 (1351)
T KOG1035|consen 711 AYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELL 787 (1351)
T ss_pred HHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHh
Confidence 999999 99999999999999999999999999999832 011111111 11245678999999999998
Q ss_pred CCCC---CCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHH
Q 047768 893 LGGE---ASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECL 969 (1009)
Q Consensus 893 ~~~~---~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~ 969 (1009)
.+.. |+.|+|+||+|||++||+. ||...+.....+.......+|.+ .++.+ +..
T Consensus 788 ~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~-~~f~~-------------------~~~ 844 (1351)
T KOG1035|consen 788 SDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEP-ADFFD-------------------PEH 844 (1351)
T ss_pred cccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCC-ccccc-------------------ccc
Confidence 7755 9999999999999999985 56543322111111111112222 22222 222
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 970 VAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 970 ~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
..-.+++.++++.||.+||||.|++.
T Consensus 845 ~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 845 PEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred hHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 33468999999999999999999975
No 284
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.3e-33 Score=309.82 Aligned_cols=250 Identities=21% Similarity=0.298 Sum_probs=197.1
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALV 781 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 781 (1009)
.|.....||+|+||.||+|....++..||||.++.......+.+.+|+..++.++|+|++++++.+.. .+..++|
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~-----~~~~~lv 97 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLV-----GDELWVV 97 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheec-----CCeEEEE
Confidence 34445679999999999999988899999999865544445678899999999999999999998654 3678999
Q ss_pred EeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccc
Q 047768 782 YEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 861 (1009)
Q Consensus 782 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~ 861 (1009)
|||+++++|.+++... .+++.++..++.|++.|++|||++ +|+||||||+||++++++.+||+|||++..
T Consensus 98 ~e~~~~~~L~~~~~~~-------~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~ 167 (292)
T cd06658 98 MEFLEGGALTDIVTHT-------RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQ 167 (292)
T ss_pred EeCCCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhh
Confidence 9999999999988543 278999999999999999999999 999999999999999999999999999875
Q ss_pred cCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccch
Q 047768 862 LSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEK 941 (1009)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 941 (1009)
..... .......|+..|+|||...+..++.++||||||+++|||++|+.||...... .....
T Consensus 168 ~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-----~~~~~----- 229 (292)
T cd06658 168 VSKEV--------PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL-----QAMRR----- 229 (292)
T ss_pred ccccc--------ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHH-----
Confidence 43211 1112356889999999998889999999999999999999999998642211 11000
Q ss_pred hhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 942 VMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 942 ~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
+.......... .......+.+++.+|+..||.+|||+.|+++.
T Consensus 230 ~~~~~~~~~~~------------~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 230 IRDNLPPRVKD------------SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred HHhcCCCcccc------------ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 01111111110 00122356788999999999999999999864
No 285
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=4.5e-33 Score=300.39 Aligned_cols=248 Identities=23% Similarity=0.324 Sum_probs=197.5
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc-----cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCc
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-----GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVD 776 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 776 (1009)
+|+..+.||+|+||+||+|....+++.||+|.+..... ...+.+.+|++++++++|+||+++++++... .
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREE-----D 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecC-----C
Confidence 46778899999999999999988899999999865432 2346788999999999999999999986543 6
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
..++|+||+++++|.+++.... .+++..+..++.|++.|++|||+. +|+|+||+|+||+++.++.+||+||
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~ 146 (258)
T cd06632 76 NLYIFLELVPGGSLAKLLKKYG------SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADF 146 (258)
T ss_pred eEEEEEEecCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccC
Confidence 7899999999999999997654 378999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCCCC-CCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGE-ASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 935 (1009)
|.+....... ......|+..|+|||.+.... ++.++|+||||+++|||++|+.||..... ......
T Consensus 147 ~~~~~~~~~~---------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~----~~~~~~ 213 (258)
T cd06632 147 GMAKQVVEFS---------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG----VAAVFK 213 (258)
T ss_pred ccceeccccc---------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH----HHHHHH
Confidence 9987654321 112356889999999987776 89999999999999999999999874321 111100
Q ss_pred HhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 936 RALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 936 ~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
......... ........+.+++.+|++.+|++||++.|++.
T Consensus 214 ~~~~~~~~~-------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 214 IGRSKELPP-------------------IPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred HHhcccCCC-------------------cCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 000000000 00112345678999999999999999999975
No 286
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=2.4e-33 Score=308.05 Aligned_cols=252 Identities=21% Similarity=0.269 Sum_probs=201.7
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
.++|.+.+.||+|+||.||+|....+++.||+|.+........+.+.+|+.++++++|||++++++++... ...+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~-----~~~~ 92 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVG-----DELW 92 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeC-----CcEE
Confidence 36888999999999999999998888999999998755544557788999999999999999999987543 6789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+|+||+++++|.+++.+.. +++.++..++.|++.|+.|||++ +++||||+|+||+++.++.+||+|||++
T Consensus 93 lv~e~~~~~~L~~~~~~~~-------l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~ 162 (293)
T cd06647 93 VVMEYLAGGSLTDVVTETC-------MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 162 (293)
T ss_pred EEEecCCCCcHHHHHhhcC-------CCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcce
Confidence 9999999999999997643 78889999999999999999999 9999999999999999999999999988
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhcc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
....... .......|++.|+|||.+....++.++|||||||++||+++|+.||......... ..
T Consensus 163 ~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~-~~------- 226 (293)
T cd06647 163 AQITPEQ--------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL-YL------- 226 (293)
T ss_pred ecccccc--------cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhe-ee-------
Confidence 7554321 1112345888999999998888999999999999999999999999743221100 00
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
... ...+ . ..........+.+++.+||..+|++||++.+++..
T Consensus 227 -----~~~---~~~~----~--~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 227 -----IAT---NGTP----E--LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred -----hhc---CCCC----C--CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 0000 0 00011123457789999999999999999999865
No 287
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-33 Score=335.10 Aligned_cols=266 Identities=26% Similarity=0.418 Sum_probs=209.0
Q ss_pred ccCccCCcccccCCceEEEEEEec-------CCeEEEEEEeecccc-cchHHHHHHHHHHHhc-CCCCcceEEeeeeccc
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHE-------NGMLVAVKVINLEQK-GGSKSFAAECEALRSI-RHRNLIKIVTICSSID 771 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 771 (1009)
++..+.+.+|+|.||.||+|..+. ....||||.++.... ...+.+..|+++|+.+ +|+||+.++|+|+.
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~-- 373 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQ-- 373 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeecc--
Confidence 344556799999999999998651 145799999875433 3457899999999999 69999999999986
Q ss_pred cCCCceEEEEEeccCCCCHHHHHhccC--CCCCc--------cCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCC
Q 047768 772 FKGVDFKALVYEYMQNGSLEEWLHQRD--DQLGI--------CNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPS 841 (1009)
Q Consensus 772 ~~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~~~--------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~ 841 (1009)
....++|+||+.+|+|.+|++.++ ..... ..++..+.+.++.|||.|++||+++ ++||||+.++
T Consensus 374 ---~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaR 447 (609)
T KOG0200|consen 374 ---DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAAR 447 (609)
T ss_pred ---CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhhhhh
Confidence 367899999999999999999877 11111 2388999999999999999999999 9999999999
Q ss_pred ceeeCCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCC
Q 047768 842 NVLLDHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPT 920 (1009)
Q Consensus 842 Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~ 920 (1009)
|||++++..+||+|||+|+......++..... .+. -+..|||||.+....|+.++|||||||++||++| |..||
T Consensus 448 NVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~----~~~-LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PY 522 (609)
T KOG0200|consen 448 NVLITKNKVIKIADFGLARDHYNKDYYRTKSS----AGT-LPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPY 522 (609)
T ss_pred hEEecCCCEEEEccccceeccCCCCceEecCC----CCc-cceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCC
Confidence 99999999999999999997766543221110 001 2456999999999999999999999999999999 99999
Q ss_pred cccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 047768 921 ESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHA 1000 (1009)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i 1000 (1009)
...... .. +.+.+. ...+...+..|..+++++|..||+.+|++||++.|+++.+...
T Consensus 523 p~~~~~----~~---------l~~~l~----------~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 523 PGIPPT----EE---------LLEFLK----------EGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred CCCCcH----HH---------HHHHHh----------cCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 752111 11 111111 1111223345677899999999999999999999999999985
Q ss_pred HH
Q 047768 1001 RQ 1002 (1009)
Q Consensus 1001 ~~ 1002 (1009)
..
T Consensus 580 l~ 581 (609)
T KOG0200|consen 580 LQ 581 (609)
T ss_pred HH
Confidence 43
No 288
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=4.5e-33 Score=301.66 Aligned_cols=254 Identities=20% Similarity=0.274 Sum_probs=196.3
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc-----chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCC
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG-----GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 775 (1009)
.+|++.+.||+|+||.||.|.+..+++.||||.+...... ..+.+.+|++++++++||||+++++++... ..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~ 78 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP---ME 78 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC---CC
Confidence 4788899999999999999999989999999998643211 134688899999999999999999986432 23
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
...++||||+++++|.+++.... .+++.....++.|++.||+|||+. +|+|+||||+||+++.++.+||+|
T Consensus 79 ~~~~~v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~D 149 (265)
T cd06652 79 RTLSIFMEHMPGGSIKDQLKSYG------ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGD 149 (265)
T ss_pred ceEEEEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECc
Confidence 46789999999999999997654 278888999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 935 (1009)
||+++....... .........|+..|+|||++.+..++.++|||||||++|||++|+.||..... ......
T Consensus 150 fg~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~----~~~~~~ 220 (265)
T cd06652 150 FGASKRLQTICL-----SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA----MAAIFK 220 (265)
T ss_pred Cccccccccccc-----cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch----HHHHHH
Confidence 999986543211 01112234588999999999888899999999999999999999999863211 111110
Q ss_pred HhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 936 RALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 936 ~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
..... ..+ ..+......+.+++.+|+. +|+.||+++|+++
T Consensus 221 -~~~~~----~~~--------------~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 221 -IATQP----TNP--------------VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred -HhcCC----CCC--------------CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 00000 000 0111223456788888885 8999999999975
No 289
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.4e-34 Score=306.88 Aligned_cols=254 Identities=22% Similarity=0.275 Sum_probs=197.1
Q ss_pred HhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecc--cccchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCCC
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLE--QKGGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~ 775 (1009)
...+|++.++||+||.+.||++... +.+.+|+|++... +.+....|..|+..|.++ .|.+||++++|... .
T Consensus 359 kg~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~-----d 432 (677)
T KOG0596|consen 359 KGREYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVT-----D 432 (677)
T ss_pred CcchhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeecc-----C
Confidence 4568999999999999999999875 5567888776433 333457899999999999 59999999999543 4
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
++.|+||||- ..+|.++|+++... ++...++.+..|++.|+.++|.+ ||||.||||.|+|+- .|.+||+|
T Consensus 433 ~~lYmvmE~G-d~DL~kiL~k~~~~-----~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~LKLID 502 (677)
T KOG0596|consen 433 GYLYMVMECG-DIDLNKILKKKKSI-----DPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRLKLID 502 (677)
T ss_pred ceEEEEeecc-cccHHHHHHhccCC-----CchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeEEeee
Confidence 7899999986 56999999987753 33237889999999999999999 999999999999984 57999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCCCC-----------CCCcccchHHHHHHHHHHhCCCCCcccc
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGE-----------ASMRGGVYSYGILLLEIFTRRRPTESMF 924 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----------~~~~~DvwS~Gvvl~elltg~~p~~~~~ 924 (1009)
||+|.-+..... .......+||+.||+||.+.... .++++||||+||++|+|+.|+.||+...
T Consensus 503 FGIA~aI~~DTT------sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~ 576 (677)
T KOG0596|consen 503 FGIANAIQPDTT------SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII 576 (677)
T ss_pred echhcccCcccc------ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH
Confidence 999988765432 22334578999999999876542 5689999999999999999999997432
Q ss_pred cCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 925 NEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.. | .++..+.++.-.-...+ ++...+++++|..|++.||++|||+.|+++
T Consensus 577 n~------~------aKl~aI~~P~~~Iefp~---------~~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 577 NQ------I------AKLHAITDPNHEIEFPD---------IPENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred HH------H------HHHHhhcCCCccccccC---------CCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 11 1 23344455432211110 011123889999999999999999999986
No 290
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=4e-33 Score=301.06 Aligned_cols=254 Identities=25% Similarity=0.453 Sum_probs=199.3
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
.++|.+.+.||+|+||.||+|.+. .+..||+|.++... ...+.+.+|++++++++|+||+++++++.. ...+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~~~ 76 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK------EPIY 76 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC------CCeE
Confidence 457889999999999999999865 56679999886432 234678899999999999999999988643 4578
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
++|||+++++|.+++..... ..+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.+|++|||.+
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 149 (260)
T cd05073 77 IITEFMAKGSLLDFLKSDEG----SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLA 149 (260)
T ss_pred EEEEeCCCCcHHHHHHhCCc----cccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcce
Confidence 99999999999999976432 2478889999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHHhc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
........ .......++..|+|||++....++.++|||||||++||+++ |+.||...... ..........
T Consensus 150 ~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~ 220 (260)
T cd05073 150 RVIEDNEY-------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRALERGY 220 (260)
T ss_pred eeccCCCc-------ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHhCCC
Confidence 76543211 11112345678999999998899999999999999999999 89998643211 1111111000
Q ss_pred cchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 047768 939 PEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCH 999 (1009)
Q Consensus 939 ~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~ 999 (1009)
. . . .....+.++.+++.+|++.+|++||++.++.+.|+.
T Consensus 221 ~----------~-~-----------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 221 R----------M-P-----------RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred C----------C-C-----------CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0 0 0 001233468899999999999999999999998864
No 291
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=7.3e-33 Score=301.29 Aligned_cols=255 Identities=23% Similarity=0.368 Sum_probs=196.4
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc----------chHHHHHHHHHHHhcCCCCcceEEeeeeccc
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG----------GSKSFAAECEALRSIRHRNLIKIVTICSSID 771 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 771 (1009)
+|.+.+.||+|+||.||+|....+++.||+|.++..... ..+.+.+|++++++++|||++++++++...
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~- 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTE- 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccC-
Confidence 467788999999999999999888999999988643111 124578899999999999999999987543
Q ss_pred cCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCce
Q 047768 772 FKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 851 (1009)
Q Consensus 772 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~ 851 (1009)
...++|+||+++++|.+++.... .+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.+
T Consensus 81 ----~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~ 147 (272)
T cd06629 81 ----EYLSIFLEYVPGGSIGSCLRTYG------RFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGIC 147 (272)
T ss_pred ----CceEEEEecCCCCcHHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeE
Confidence 67899999999999999998753 388899999999999999999998 99999999999999999999
Q ss_pred EEeccccccccCCCCCCCccccCCccccccccccccCccccCCCC--CCCcccchHHHHHHHHHHhCCCCCcccccCCcc
Q 047768 852 HVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGE--ASMRGGVYSYGILLLEIFTRRRPTESMFNEGLT 929 (1009)
Q Consensus 852 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~ 929 (1009)
+++|||+++...... .........|+..|+|||...... ++.++||||||+++||+++|..||.....
T Consensus 148 ~l~d~~~~~~~~~~~------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~---- 217 (272)
T cd06629 148 KISDFGISKKSDDIY------DNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA---- 217 (272)
T ss_pred EEeeccccccccccc------cccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch----
Confidence 999999997653211 001122345889999999987654 78999999999999999999999853211
Q ss_pred HHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 930 LHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 930 ~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
........ .......+.. .........+.+++.+|+..+|+.||++.||++
T Consensus 218 ~~~~~~~~-~~~~~~~~~~--------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 218 IAAMFKLG-NKRSAPPIPP--------------DVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred HHHHHHhh-ccccCCcCCc--------------cccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 11111100 0000000000 000123456789999999999999999999976
No 292
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.3e-33 Score=305.75 Aligned_cols=260 Identities=25% Similarity=0.388 Sum_probs=201.2
Q ss_pred ccCccCCcccccCCceEEEEEEec-----CCeEEEEEEeeccccc-chHHHHHHHHHHHhcCCCCcceEEeeeeccccCC
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHE-----NGMLVAVKVINLEQKG-GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKG 774 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 774 (1009)
++|++.+.||+|+||+||+|+.+. +.+.||+|.+...... ..+.+.+|++++++++|+||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---- 80 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREA---- 80 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCC----
Confidence 568888999999999999999763 3467999988644332 346789999999999999999999987543
Q ss_pred CceEEEEEeccCCCCHHHHHhccCCCCC---ccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCce
Q 047768 775 VDFKALVYEYMQNGSLEEWLHQRDDQLG---ICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 851 (1009)
Q Consensus 775 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~ 851 (1009)
...++||||+++|+|.+++........ ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+
T Consensus 81 -~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~ 156 (275)
T cd05046 81 -EPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREV 156 (275)
T ss_pred -CcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcE
Confidence 567999999999999999986542210 12489999999999999999999999 99999999999999999999
Q ss_pred EEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccH
Q 047768 852 HVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTL 930 (1009)
Q Consensus 852 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~ 930 (1009)
+++|||+++....... .......++..|+|||.+.+..++.++||||||+++|||++ |..||......
T Consensus 157 ~l~~~~~~~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~---- 225 (275)
T cd05046 157 KVSLLSLSKDVYNSEY-------YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE---- 225 (275)
T ss_pred EEcccccccccCcccc-------cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH----
Confidence 9999999875433211 11223456788999999988889999999999999999999 78888643211
Q ss_pred HHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 047768 931 HEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLC 998 (1009)
Q Consensus 931 ~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~ 998 (1009)
............ . . ....++..+.+++.+|++.+|++||++.|+++.|.
T Consensus 226 -~~~~~~~~~~~~-~------~-----------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 226 -EVLNRLQAGKLE-L------P-----------VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred -HHHHHHHcCCcC-C------C-----------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 111111000000 0 0 01123456889999999999999999999998875
No 293
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=3.2e-33 Score=306.57 Aligned_cols=273 Identities=22% Similarity=0.277 Sum_probs=200.4
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc--ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ--KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
+|.+.+.||+|+||.||+|.+..+|+.||||++.... ....+.+.+|+.++++++|||++++++++.. ....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~ 75 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPH-----GSGFV 75 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEec-----CCeeE
Confidence 4788899999999999999998889999999997544 2234678999999999999999999998654 36789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+|+||+ +++|.+++..... .+++.+++.++.|+++|++|||+. +++|+||||+||+++.++.++++|||++
T Consensus 76 ~v~e~~-~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~ 146 (286)
T cd07832 76 LVMEYM-PSDLSEVLRDEER-----PLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLA 146 (286)
T ss_pred EEeccc-CCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeec
Confidence 999999 9999999876543 389999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
........ .......|+..|+|||++.+. .++.++||||+|+++|||++|+.||...... ...........
T Consensus 147 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~~~~~~~~ 218 (286)
T cd07832 147 RLFSEEEP-------RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI-EQLAIVFRTLG 218 (286)
T ss_pred ccccCCCC-------CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH-HHHHHHHHHcC
Confidence 86653211 112234688999999987654 4689999999999999999998777542211 11111111000
Q ss_pred ---cchhhh---ccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 939 ---PEKVME---IVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 939 ---~~~~~~---~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
+....+ ..+......+............+...++.+++.+|++.+|.+||+++++++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 219 TPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred CCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000 0000000000000000000001223678899999999999999999999763
No 294
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=4.5e-33 Score=306.43 Aligned_cols=249 Identities=22% Similarity=0.299 Sum_probs=197.5
Q ss_pred CccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEE
Q 047768 703 FSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVY 782 (1009)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 782 (1009)
|.....||+|+||.||+|....+++.||+|+++.......+.+.+|+.+++.++|||++++++++.. ....++|+
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-----~~~~~iv~ 97 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLV-----GEELWVLM 97 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheee-----CCeEEEEE
Confidence 3445679999999999999988899999999976555556778899999999999999999998654 36789999
Q ss_pred eccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccccc
Q 047768 783 EYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 862 (1009)
Q Consensus 783 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~ 862 (1009)
||+++++|.+++.... +++..++.++.|++.|++|||+. +++||||+|+||+++.++.+||+|||++...
T Consensus 98 e~~~~~~L~~~~~~~~-------~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~ 167 (297)
T cd06659 98 EFLQGGALTDIVSQTR-------LNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQI 167 (297)
T ss_pred ecCCCCCHHHHHhhcC-------CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhc
Confidence 9999999999886532 88999999999999999999999 9999999999999999999999999998755
Q ss_pred CCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchh
Q 047768 863 SASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKV 942 (1009)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 942 (1009)
.... .......|+..|+|||++.+..++.++|||||||++|||++|+.||..... .. ..... ...
T Consensus 168 ~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~----~~-~~~~~-~~~- 232 (297)
T cd06659 168 SKDV--------PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP----VQ-AMKRL-RDS- 232 (297)
T ss_pred cccc--------ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HH-HHHHH-hcc-
Confidence 4321 111235688999999999998999999999999999999999999863221 11 11100 000
Q ss_pred hhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 943 MEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 943 ~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
....... .......+.+++.+|++.+|.+||++.|+++.
T Consensus 233 ---~~~~~~~------------~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 233 ---PPPKLKN------------AHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred ---CCCCccc------------cCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000000 00122357789999999999999999999874
No 295
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.7e-33 Score=308.82 Aligned_cols=271 Identities=24% Similarity=0.329 Sum_probs=198.4
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc--chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG--GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
++|++.+.||+|+||.||+|.++.+++.||+|++...... ..+.+.+|+++++.++||||+++++++.. ....
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 75 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRR-----KKRL 75 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhccc-----CCeE
Confidence 3688899999999999999999888999999988543222 24578899999999999999999998643 4678
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
++|+||+++++|.++..... .+++.+++.++.|++.|++|||+. +++||||+|+||++++++.+|++|||+
T Consensus 76 ~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~ 146 (286)
T cd07846 76 YLVFEFVDHTVLDDLEKYPN------GLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGF 146 (286)
T ss_pred EEEEecCCccHHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeee
Confidence 99999999999888765433 288999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH--
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK-- 935 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~-- 935 (1009)
+....... .......++..|+|||+..+ ..++.++||||||+++|||++|+.||...... ........
T Consensus 147 ~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~-~~~~~~~~~~ 217 (286)
T cd07846 147 ARTLAAPG--------EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDI-DQLYHIIKCL 217 (286)
T ss_pred eeeccCCc--------cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchH-HHHHHHHHHh
Confidence 98654321 11123457889999998775 45688999999999999999999988632211 00011100
Q ss_pred HhccchhhhccC------CCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 936 RALPEKVMEIVD------PSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 936 ~~~~~~~~~~~d------~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
....+......+ ....+....... ...........+.+++.+||+.+|++||++.|+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 218 GNLIPRHQEIFQKNPLFAGMRLPEVKEIEP-LEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred CCCchhhHHHhccchHhhccccccccCcch-HHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 001111111110 000000000000 00001123456889999999999999999999875
No 296
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=6.7e-33 Score=300.23 Aligned_cols=255 Identities=21% Similarity=0.282 Sum_probs=201.3
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
+|++.+.||.|+||.||+|.+..+++.||+|+++.... ...+.+..|++++++++|||++++++++.. ......+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIID---RSNQTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeec---CCCCEEE
Confidence 47788999999999999999998999999999864322 234568889999999999999999987643 2335678
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHh-----hcCCCCceecCCCCCceeeCCCCceEEe
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLH-----HHCQPPIVHGDLKPSNVLLDHDMVAHVS 854 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH-----~~~~~~ivHrdlk~~Nill~~~~~~kl~ 854 (1009)
+++||+++++|.+++...... ...+++..++.++.+++.|++||| +. +++||||+|+||+++.++.+|++
T Consensus 78 ~~~e~~~~~~L~~~l~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~ 152 (265)
T cd08217 78 IVMEYCEGGDLAQLIQKCKKE--RKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLG 152 (265)
T ss_pred EEehhccCCCHHHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEe
Confidence 999999999999999764221 124899999999999999999999 66 99999999999999999999999
Q ss_pred ccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHH
Q 047768 855 DFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFA 934 (1009)
Q Consensus 855 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 934 (1009)
|||++....... .......|++.|+|||++.+..++.++||||||+++|+|++|+.||.... .....
T Consensus 153 d~g~~~~~~~~~--------~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~ 219 (265)
T cd08217 153 DFGLAKILGHDS--------SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN-----QLQLA 219 (265)
T ss_pred cccccccccCCc--------ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC-----HHHHH
Confidence 999998765421 11123468899999999999999999999999999999999999987432 11111
Q ss_pred HHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 935 KRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 935 ~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
.... ...... ........+.+++.+|++.+|++||++.||++.
T Consensus 220 ~~~~--------~~~~~~-----------~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 220 SKIK--------EGKFRR-----------IPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred HHHh--------cCCCCC-----------CccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 1110 000000 111234567899999999999999999999863
No 297
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=4.1e-33 Score=310.29 Aligned_cols=260 Identities=25% Similarity=0.298 Sum_probs=200.8
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc---chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG---GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
++|+..+.||+|+||.||+|....+++.||+|.+...... ..+.+.+|+++++.++|+||+++++.+.. ...
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~ 75 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQT-----ETY 75 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeec-----CCE
Confidence 3688889999999999999999888999999999654322 34568899999999999999999998654 367
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++||||+.+++|.+++..... ..+++..+..++.|+++|++|||+. +++||||||+||+++.++.++|+|||
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg 148 (316)
T cd05574 76 LCLVMDYCPGGELFRLLQRQPG----KCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFD 148 (316)
T ss_pred EEEEEEecCCCCHHHHHHhCCC----CccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecc
Confidence 8999999999999999875432 2489999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCCCCcc---------------------ccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhC
Q 047768 858 LAKFLSASPLGNVV---------------------ETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTR 916 (1009)
Q Consensus 858 la~~~~~~~~~~~~---------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg 916 (1009)
++............ ..........||..|+|||++.+..++.++||||||+++|||++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g 228 (316)
T cd05574 149 LSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYG 228 (316)
T ss_pred hhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhC
Confidence 98765432110000 000111234688999999999999999999999999999999999
Q ss_pred CCCCcccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCC----HHH
Q 047768 917 RRPTESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRME----MTD 992 (1009)
Q Consensus 917 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt----~~e 992 (1009)
+.||...... ..+ ..+.+..... + ........+.+++.+|++.||++||+ ++|
T Consensus 229 ~~pf~~~~~~----~~~---------~~~~~~~~~~-~---------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ 285 (316)
T cd05574 229 TTPFKGSNRD----ETF---------SNILKKEVTF-P---------GSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAE 285 (316)
T ss_pred CCCCCCCchH----HHH---------HHHhcCCccC-C---------CccccCHHHHHHHHHHccCCHhHCCCchhhHHH
Confidence 9998643221 111 1111111000 0 00013456889999999999999999 666
Q ss_pred HHH
Q 047768 993 VVV 995 (1009)
Q Consensus 993 vl~ 995 (1009)
++.
T Consensus 286 ll~ 288 (316)
T cd05574 286 IKQ 288 (316)
T ss_pred HHc
Confidence 655
No 298
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3.3e-33 Score=304.48 Aligned_cols=261 Identities=23% Similarity=0.300 Sum_probs=202.9
Q ss_pred HhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhc-CCCCcceEEeeeecccc-CCCc
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSI-RHRNLIKIVTICSSIDF-KGVD 776 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~-~~~~ 776 (1009)
+.++|++.+.||+|+||.||+|.++.+++.||+|+++.... ..+.+.+|+++++++ +|+||+++++++..... ....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 46789999999999999999999988899999999865433 346789999999999 79999999999865422 2346
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
..++||||+++++|.+++...... ...+++..+..++.|++.|+.|||+. +++||||+|+||++++++.+|++||
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~ 157 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKK--GKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDF 157 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCC
Confidence 789999999999999998753311 12488999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCC-----CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHH
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-----GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLH 931 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~ 931 (1009)
|++....... .......|+..|+|||++.. ..++.++|||||||++|||++|+.||...... .
T Consensus 158 ~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~ 225 (275)
T cd06608 158 GVSAQLDSTL--------GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM----R 225 (275)
T ss_pred ccceecccch--------hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH----H
Confidence 9987654321 11223458899999998754 34678999999999999999999999642111 1
Q ss_pred HHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 932 EFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 932 ~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.. ....... .+.+ .....+..++.+++.+|+..||++|||+.|+++
T Consensus 226 ~~-~~~~~~~-----~~~~------------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 226 AL-FKIPRNP-----PPTL------------KSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred HH-HHhhccC-----CCCC------------CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11 1000000 0000 011234557889999999999999999999975
No 299
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=4.8e-33 Score=304.65 Aligned_cols=254 Identities=22% Similarity=0.317 Sum_probs=192.6
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc-cchHHHHHHHHH-HHhcCCCCcceEEeeeeccccCCCceE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-GGSKSFAAECEA-LRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
++|++.+.||+|+||.||+|+++.+|+.||+|+++.... .....+..|+.. ++..+|||++++++++.. ....
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~-----~~~~ 75 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFR-----EGDV 75 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEec-----CCcE
Confidence 468889999999999999999998999999999865432 223455566665 566689999999998754 3568
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
++||||++ |+|.+++...... ...+++..++.++.|++.|++|||+++ +++||||||+||+++.++.+||+|||+
T Consensus 76 ~lv~e~~~-~~l~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~ 150 (283)
T cd06617 76 WICMEVMD-TSLDKFYKKVYDK--GLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGI 150 (283)
T ss_pred EEEhhhhc-ccHHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 99999996 7898888653221 134899999999999999999999853 799999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCC----CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHH
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG----GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFA 934 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 934 (1009)
++..... .......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||...... .....
T Consensus 151 ~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~ 218 (283)
T cd06617 151 SGYLVDS---------VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP---FQQLK 218 (283)
T ss_pred ccccccc---------cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC---HHHHH
Confidence 9865322 11122457889999998765 45688999999999999999999998643211 11111
Q ss_pred HHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 935 KRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 935 ~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
..........+. ..+..++.+++.+|+..+|++||+++++++
T Consensus 219 ---------~~~~~~~~~~~~----------~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 219 ---------QVVEEPSPQLPA----------EKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred ---------HHHhcCCCCCCc----------cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111100000000 013346789999999999999999999986
No 300
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=5.4e-33 Score=301.77 Aligned_cols=256 Identities=25% Similarity=0.389 Sum_probs=197.0
Q ss_pred cCccCCcccccCCceEEEEEEec-CCeEEEEEEeecccc----------cchHHHHHHHHHHHh-cCCCCcceEEeeeec
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHE-NGMLVAVKVINLEQK----------GGSKSFAAECEALRS-IRHRNLIKIVTICSS 769 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~ 769 (1009)
+|++.+.||+|+||.||+|.+.. .++.+|+|.+..... .....+.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788999999999999999986 678999998853321 112456778888875 699999999998754
Q ss_pred cccCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCC
Q 047768 770 IDFKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDM 849 (1009)
Q Consensus 770 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~ 849 (1009)
....++||||+++++|.+++...... ...+++..++.++.|++.|+.|||+.. +++||||+|+||+++.++
T Consensus 81 -----~~~~~lv~e~~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~ 151 (269)
T cd08528 81 -----NDRLYIVMDLIEGAPLGEHFNSLKEK--KQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDD 151 (269)
T ss_pred -----CCeEEEEEecCCCCcHHHHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCC
Confidence 36789999999999999988642211 124889999999999999999999631 899999999999999999
Q ss_pred ceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCcc
Q 047768 850 VAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLT 929 (1009)
Q Consensus 850 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~ 929 (1009)
.+|++|||.+....... ......|+..|+|||...+..++.++||||||+++|||++|+.||....
T Consensus 152 ~~~l~dfg~~~~~~~~~---------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~----- 217 (269)
T cd08528 152 KVTITDFGLAKQKQPES---------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTN----- 217 (269)
T ss_pred cEEEecccceeeccccc---------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccC-----
Confidence 99999999998654321 1223568899999999999889999999999999999999999986321
Q ss_pred HHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 047768 930 LHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLC 998 (1009)
Q Consensus 930 ~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~ 998 (1009)
....... +.+....+.+. ......+.+++.+|++.||++||++.|+.++++
T Consensus 218 ~~~~~~~--------~~~~~~~~~~~----------~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 218 MLSLATK--------IVEAVYEPLPE----------GMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred HHHHHHH--------HhhccCCcCCc----------ccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 1111111 11111111000 012345789999999999999999999998875
No 301
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.3e-32 Score=304.38 Aligned_cols=263 Identities=22% Similarity=0.251 Sum_probs=200.2
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
++|++.+.||+|+||.||+|.+..+++.||+|.++.... ...+.+.+|+++++.++||||+++++.+.. ...
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~ 75 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFET-----KRH 75 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEec-----CCE
Confidence 368889999999999999999998999999999865432 223567899999999999999999988654 367
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++||||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg 146 (305)
T cd05609 76 LCMVMEYVEGGDCATLLKNIG------ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFG 146 (305)
T ss_pred EEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCC
Confidence 899999999999999997654 388999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCCCCcc-------ccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccH
Q 047768 858 LAKFLSASPLGNVV-------ETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTL 930 (1009)
Q Consensus 858 la~~~~~~~~~~~~-------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~ 930 (1009)
+++........... ..........|+..|+|||++.+..++.++|||||||++|||++|+.||.... .
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~-----~ 221 (305)
T cd05609 147 LSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT-----P 221 (305)
T ss_pred CccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----H
Confidence 98743211100000 00011112457889999999998899999999999999999999999986321 1
Q ss_pred HHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 047768 931 HEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCH 999 (1009)
Q Consensus 931 ~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~ 999 (1009)
.+........... .+.. .......+.+++.+|++.+|++||++.++.+.++.
T Consensus 222 ~~~~~~~~~~~~~---~~~~--------------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 222 EELFGQVISDDIE---WPEG--------------DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HHHHHHHHhcccC---CCCc--------------cccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 1221111111000 0000 00223457899999999999999997666655544
No 302
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1e-32 Score=298.68 Aligned_cols=255 Identities=28% Similarity=0.410 Sum_probs=199.9
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc--chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG--GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
+|.+.+.||+|+||.||+|....+++.||+|+++..... ..+.+.+|++++++++|+||+++++++.. ....+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~ 75 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVH-----REKVY 75 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEec-----CCEEE
Confidence 578889999999999999999888999999999765443 45688999999999999999999998643 36789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+|+||+++++|.+++.... .+++..+..++.+++.|++|||+. +|+|+||+|+||++++++.+||+|||.+
T Consensus 76 lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~ 146 (264)
T cd06626 76 IFMEYCSGGTLEELLEHGR------ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCA 146 (264)
T ss_pred EEEecCCCCcHHHHHhhcC------CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccc
Confidence 9999999999999998653 278889999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCC---CCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHH
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGE---ASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKR 936 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 936 (1009)
.......... ........++..|+|||++.+.. ++.++||||||+++||+++|+.||...... ......
T Consensus 147 ~~~~~~~~~~----~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~----~~~~~~ 218 (264)
T cd06626 147 VKLKNNTTTM----GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE----FQIMFH 218 (264)
T ss_pred cccCCCCCcc----cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch----HHHHHH
Confidence 8765432110 01012356788999999988766 899999999999999999999999643211 111000
Q ss_pred hccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 937 ALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 937 ~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.... ..+.+ +. .......+.+++.+|++.+|.+||++.|++.
T Consensus 219 ~~~~-----~~~~~---~~---------~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 219 VGAG-----HKPPI---PD---------SLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred HhcC-----CCCCC---Cc---------ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000 00000 00 0012345678999999999999999999864
No 303
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=5.4e-33 Score=313.90 Aligned_cols=276 Identities=20% Similarity=0.233 Sum_probs=201.8
Q ss_pred HhccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc--ccchHHHHHHHHHHHhcCCCCcceEEeeeeccc-cCCC
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ--KGGSKSFAAECEALRSIRHRNLIKIVTICSSID-FKGV 775 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~ 775 (1009)
..++|++.+.||+|+||.||+|....+++.||||++.... ....+.+.+|++++++++||||+++++++.... +.+.
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 3578999999999999999999999899999999985332 223456778999999999999999999875432 2233
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
...++||||+. ++|.+++... +++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~--------l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~D 161 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD--------LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 161 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc--------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEcc
Confidence 46799999995 5888887542 77888999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 935 (1009)
||+++...... ......++..|+|||.+.+..++.++|||||||++|+|++|+.||...... ........
T Consensus 162 fg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~-~~~~~~~~ 231 (353)
T cd07850 162 FGLARTAGTSF---------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHI-DQWNKIIE 231 (353)
T ss_pred CccceeCCCCC---------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHH
Confidence 99998654321 122345788999999999999999999999999999999999998643211 00111111
Q ss_pred Hh--ccchhhhccCCCCCChhhhhhhcc-----------------ccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 936 RA--LPEKVMEIVDPSLLPLEEERTNSR-----------------RVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 936 ~~--~~~~~~~~~d~~l~~~~~~r~~~~-----------------~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
.. .++++.+.++.........++... .........++.+++.+|++.||++|||+.|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 232 QLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred hcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 011111111111111000000000 00011234567899999999999999999999864
No 304
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.2e-32 Score=298.09 Aligned_cols=253 Identities=25% Similarity=0.346 Sum_probs=204.5
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
++|++.+.||+|++|.||+|+...+++.||||++..... ...+.+.+|++++++++|+|++++++++.. ....+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 75 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYK-----EGEIS 75 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcc-----CCeEE
Confidence 368888999999999999999998899999999865543 335689999999999999999999998654 37889
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhh-cCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHH-HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
+|+||+++++|.+++.... .+++..++.++.|+++|++|||+ . +++||||+|+||+++.++.++++|||.
T Consensus 76 lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~ 146 (264)
T cd06623 76 IVLEYMDGGSLADLLKKVG------KIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGI 146 (264)
T ss_pred EEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCcc
Confidence 9999999999999998753 38999999999999999999999 8 999999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhc
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
+........ ......++..|+|||.+.+..++.++||||||+++|||++|+.||...... ...+......
T Consensus 147 ~~~~~~~~~--------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--~~~~~~~~~~ 216 (264)
T cd06623 147 SKVLENTLD--------QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP--SFFELMQAIC 216 (264)
T ss_pred ceecccCCC--------cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc--CHHHHHHHHh
Confidence 986653221 112345788999999999999999999999999999999999998754321 1111111111
Q ss_pred cchhhhccCCCCCChhhhhhhccccccHH-HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 939 PEKVMEIVDPSLLPLEEERTNSRRVRNEE-CLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 939 ~~~~~~~~d~~l~~~~~~r~~~~~~~~~~-~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
....... ... +...+.+++.+|++.+|++||++.|+++.
T Consensus 217 --------~~~~~~~-----------~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 217 --------DGPPPSL-----------PAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred --------cCCCCCC-----------CcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 1000000 011 34568899999999999999999999874
No 305
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=7.5e-33 Score=304.18 Aligned_cols=269 Identities=19% Similarity=0.228 Sum_probs=189.5
Q ss_pred hccCccCCcccccCCceEEEEEEecC---CeEEEEEEeecccccch-----------HHHHHHHHHHHhcCCCCcceEEe
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHEN---GMLVAVKVINLEQKGGS-----------KSFAAECEALRSIRHRNLIKIVT 765 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~l~~ 765 (1009)
.++|.+.+.||+|+||+||+|.+..+ +..+|+|+......... .....+...+..+.|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 35899999999999999999998866 56777776543322110 11122334455678999999998
Q ss_pred eeeccccCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceee
Q 047768 766 ICSSIDFKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLL 845 (1009)
Q Consensus 766 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill 845 (1009)
++... .......++++|++. .++.+.+..... .++..+..++.|++.|++|||+. +|+||||||+||++
T Consensus 91 ~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill 159 (294)
T PHA02882 91 CGSFK-RCRMYYRFILLEKLV-ENTKEIFKRIKC------KNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMV 159 (294)
T ss_pred eeeEe-cCCceEEEEEEehhc-cCHHHHHHhhcc------CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEE
Confidence 76543 112235578888873 467777655332 56788899999999999999999 99999999999999
Q ss_pred CCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCccccc
Q 047768 846 DHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFN 925 (1009)
Q Consensus 846 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~ 925 (1009)
+.++.++|+|||+|+.......... ..........||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 160 ~~~~~~~l~DFGla~~~~~~~~~~~-~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~ 238 (294)
T PHA02882 160 DGNNRGYIIDYGIASHFIIHGKHIE-YSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGH 238 (294)
T ss_pred cCCCcEEEEEcCCceeeccCCcccc-cccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCcccc
Confidence 9999999999999987643211100 011112235699999999999999999999999999999999999999975422
Q ss_pred CCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 047768 926 EGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKL 997 (1009)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L 997 (1009)
...... .....+ ...+..... ....++..+.+++..|++.+|++||+++++.+.+
T Consensus 239 ~~~~~~-~~~~~~---~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 239 NGNLIH-AAKCDF---IKRLHEGKI-------------KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred chHHHH-HhHHHH---HHHhhhhhh-------------ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 211111 111000 011111000 0112345688999999999999999999998865
No 306
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-34 Score=281.60 Aligned_cols=258 Identities=23% Similarity=0.272 Sum_probs=202.9
Q ss_pred hccCccC-CcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCCCce
Q 047768 700 TNEFSSS-NTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 700 ~~~~~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
+++|++. ++||-|-.|.|-.+..+.+|+.+|+|++.. ....++|++.--.. .|||||.+++++... +.+...
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs-~~~rkc 133 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENS-YQGRKC 133 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhh-ccCcee
Confidence 4456554 679999999999999999999999999842 24457788875444 799999999998775 677788
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCC---CCceEEe
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDH---DMVAHVS 854 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~---~~~~kl~ 854 (1009)
..+|||.|+||.|.+.++.++.+ .+++.++..|++||+.|+.|||+. .|.||||||+|+|.+. +-.+|++
T Consensus 134 LLiVmE~meGGeLfsriq~~g~~----afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLt 206 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRGDQ----AFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLT 206 (400)
T ss_pred eEeeeecccchHHHHHHHHcccc----cchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEec
Confidence 89999999999999999988764 599999999999999999999999 9999999999999964 5589999
Q ss_pred ccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHH
Q 047768 855 DFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFA 934 (1009)
Q Consensus 855 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 934 (1009)
|||+|+..... ......+-|+.|.|||++....|+..+|+||+||++|-|+.|.+||.+.....
T Consensus 207 DfGFAK~t~~~---------~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a------- 270 (400)
T KOG0604|consen 207 DFGFAKETQEP---------GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA------- 270 (400)
T ss_pred ccccccccCCC---------ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc-------
Confidence 99999975532 22334567999999999999999999999999999999999999998754321
Q ss_pred HHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 935 KRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 935 ~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
++..++.-+......+|.+.| ....++..++++..++.+|.+|.|+.|+++.
T Consensus 271 ---ispgMk~rI~~gqy~FP~pEW-------s~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 271 ---ISPGMKRRIRTGQYEFPEPEW-------SCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred ---CChhHHhHhhccCccCCChhH-------hHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 112222111111112222111 1222456688888899999999999998753
No 307
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.3e-32 Score=296.83 Aligned_cols=252 Identities=31% Similarity=0.514 Sum_probs=199.3
Q ss_pred CccCCcccccCCceEEEEEEecCC----eEEEEEEeeccccc-chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 703 FSSSNTIGRGSFGFVYKGVLHENG----MLVAVKVINLEQKG-GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~~~~~----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
+++.+.||+|+||.||+|.+...+ ..||+|+++..... ..+.+..|++++++++|+||+++++++... ..
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~ 75 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE-----EP 75 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCC-----Ce
Confidence 356788999999999999998655 88999999654432 456889999999999999999999987543 67
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.+++|||+++++|.+++...... .+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||
T Consensus 76 ~~~i~e~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg 148 (258)
T smart00219 76 LMIVMEYMEGGDLLDYLRKNRPK----ELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFG 148 (258)
T ss_pred eEEEEeccCCCCHHHHHHhhhhc----cCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccC
Confidence 89999999999999999865421 189999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh-CCCCCcccccCCccHHHHHHH
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT-RRRPTESMFNEGLTLHEFAKR 936 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 936 (1009)
+++......... .....++..|+|||.+.+..++.++||||+|+++|||++ |+.||.... .......
T Consensus 149 ~~~~~~~~~~~~-------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~-----~~~~~~~ 216 (258)
T smart00219 149 LSRDLYDDDYYK-------KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS-----NEEVLEY 216 (258)
T ss_pred Cceecccccccc-------cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHH
Confidence 998765432111 112336789999999988889999999999999999999 788876421 1111111
Q ss_pred hccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 047768 937 ALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKL 997 (1009)
Q Consensus 937 ~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L 997 (1009)
..... .... ......++.+++.+|+..+|++|||+.|+++.|
T Consensus 217 ~~~~~--------~~~~-----------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 217 LKKGY--------RLPK-----------PENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HhcCC--------CCCC-----------CCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 10000 0000 011345688999999999999999999998764
No 308
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=9.6e-33 Score=304.68 Aligned_cols=269 Identities=21% Similarity=0.266 Sum_probs=197.5
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc-----chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCc
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG-----GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVD 776 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 776 (1009)
+|++.+.||+|+||.||+|.+..+++.||||+++..... ....+..|++++++++|+||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH-----KS 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec-----CC
Confidence 477888999999999999999888999999999754322 23457789999999999999999998754 36
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
..++||||+ +|+|.+++..... .+++..+..++.|+++||+|||++ +|+||||+|+||+++.++.+||+||
T Consensus 76 ~~~lv~e~~-~~~L~~~i~~~~~-----~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~df 146 (298)
T cd07841 76 NINLVFEFM-ETDLEKVIKDKSI-----VLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADF 146 (298)
T ss_pred EEEEEEccc-CCCHHHHHhccCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccc
Confidence 789999999 9999999976542 389999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 935 (1009)
|+++...... .......++..|+|||.+.+ ..++.++|||||||++|||++|..||...... ........
T Consensus 147 g~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~-~~~~~~~~ 217 (298)
T cd07841 147 GLARSFGSPN--------RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI-DQLGKIFE 217 (298)
T ss_pred eeeeeccCCC--------ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH-HHHHHHHH
Confidence 9998764321 11122346788999998755 46789999999999999999997776532211 11111111
Q ss_pred Hhccc---hhhh---ccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 936 RALPE---KVME---IVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 936 ~~~~~---~~~~---~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
..... ...+ ..+........ ..............+.+++.+|++.||++|||+.|+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 218 ALGTPTEENWPGVTSLPDYVEFKPFP--PTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred HcCCCchhhhhhcccccccccccccC--CcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 00000 0000 00000000000 00000011123456889999999999999999999987
No 309
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.2e-32 Score=298.81 Aligned_cols=256 Identities=22% Similarity=0.328 Sum_probs=199.1
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc------chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCC
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG------GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 775 (1009)
+|+..+.||+|+||.||+|....+++.||+|+++..... ..+.+.+|++++++++|+|++++++++.. .
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~ 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCE-----D 75 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceecc-----C
Confidence 477889999999999999999889999999998643311 23578899999999999999999998654 3
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCC-ceEEe
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDM-VAHVS 854 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~-~~kl~ 854 (1009)
+..++|+||+++++|.+++.+.. .+++..+..++.|++.|+.|||++ +++||||+|+||+++.++ .+||+
T Consensus 76 ~~~~~v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~ 146 (268)
T cd06630 76 SHFNLFVEWMAGGSVSHLLSKYG------AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIA 146 (268)
T ss_pred CeEEEEEeccCCCcHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEc
Confidence 67899999999999999997654 388999999999999999999999 999999999999998776 69999
Q ss_pred ccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHH
Q 047768 855 DFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFA 934 (1009)
Q Consensus 855 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 934 (1009)
|||.+......... .........|+..|+|||.+.+..++.++||||+|+++|||++|+.||...... ......
T Consensus 147 dfg~~~~~~~~~~~----~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~ 220 (268)
T cd06630 147 DFGAAARLAAKGTG----AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS--NHLALI 220 (268)
T ss_pred cccccccccccccc----CCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc--chHHHH
Confidence 99999876543110 011122346889999999998888999999999999999999999998632211 111111
Q ss_pred HHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 935 KRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 935 ~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
... ......+ ..+.....++.+++.+|+..+|++||++.|++.
T Consensus 221 ~~~--------~~~~~~~----------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 221 FKI--------ASATTAP----------SIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred HHH--------hccCCCC----------CCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 100 0000000 011123356788999999999999999999974
No 310
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1e-32 Score=301.07 Aligned_cols=249 Identities=24% Similarity=0.360 Sum_probs=196.8
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc-ccchHHHHHHHHHHHhcC---CCCcceEEeeeeccccCCCce
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ-KGGSKSFAAECEALRSIR---HRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~~~~ 777 (1009)
.|+..+.||+|+||.||+|.+..+++.||+|.++... ....+.+.+|++++++++ |||++++++++.. ...
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~-----~~~ 76 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK-----GPR 76 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee-----CCE
Confidence 4677889999999999999998899999999986542 223467889999999996 9999999998654 367
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++||||+++++|.++++.. .+++..+..++.+++.|+.|||+. +|+||||+|+||+++.++.++++|||
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~-------~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg 146 (277)
T cd06917 77 LWIIMEYAEGGSVRTLMKAG-------PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFG 146 (277)
T ss_pred EEEEEecCCCCcHHHHHHcc-------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCC
Confidence 89999999999999998654 288999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHH
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKR 936 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 936 (1009)
++....... .......|+..|+|||.+.++ .++.++|||||||++|||++|+.||..... ......
T Consensus 147 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-----~~~~~~ 213 (277)
T cd06917 147 VAALLNQNS--------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDA-----FRAMML 213 (277)
T ss_pred ceeecCCCc--------cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCCh-----hhhhhc
Confidence 998765432 112234688899999987654 468999999999999999999999864321 111000
Q ss_pred hccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 937 ALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 937 ~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
......+.+ .......++.+++.+|++.||++||++.|++..
T Consensus 214 -----~~~~~~~~~-------------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 214 -----IPKSKPPRL-------------EDNGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred -----cccCCCCCC-------------CcccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 000000000 000134568899999999999999999999763
No 311
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.6e-32 Score=303.97 Aligned_cols=247 Identities=26% Similarity=0.322 Sum_probs=195.4
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc---chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG---GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
+.|...+.||+|+||+||+|....+++.||+|++...... ..+.+.+|+++++.++|||+++++++|... ..
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~-----~~ 89 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLRE-----HT 89 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeC-----Ce
Confidence 4688889999999999999999888999999998643322 234688999999999999999999997653 56
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++|+||+. |++.+++..... .+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.+||+|||
T Consensus 90 ~~lv~e~~~-g~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg 160 (307)
T cd06607 90 AWLVMEYCL-GSASDILEVHKK-----PLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFG 160 (307)
T ss_pred EEEEHHhhC-CCHHHHHHHccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecC
Confidence 899999996 688887765433 389999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccC---CCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHH
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGL---GGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFA 934 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 934 (1009)
++...... ....++..|+|||++. ...++.++||||||+++|||++|+.||...... ...
T Consensus 161 ~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~-----~~~ 223 (307)
T cd06607 161 SASLVSPA------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----SAL 223 (307)
T ss_pred cceecCCC------------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH-----HHH
Confidence 98754322 1245788999999874 456889999999999999999999998643211 100
Q ss_pred HHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 935 KRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 935 ~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
.. +..... + ......+...+.+++.+||+.+|++||++.+++..
T Consensus 224 ~~--------~~~~~~---~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 224 YH--------IAQNDS---P-------TLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred HH--------HhcCCC---C-------CCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00 000000 0 00112345578899999999999999999999874
No 312
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-33 Score=281.97 Aligned_cols=215 Identities=23% Similarity=0.357 Sum_probs=177.6
Q ss_pred CHHHHHHHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhc-CCCCcceEEeeeecc
Q 047768 692 SYKELSKATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSI-RHRNLIKIVTICSSI 770 (1009)
Q Consensus 692 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 770 (1009)
.++|+.+.++ +.||+|+|+.|-.++...+|.++|||+++........+..+|++++.+. .|+||++++.|+
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefF--- 145 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFF--- 145 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHh---
Confidence 3566666654 5699999999999999999999999999877555667889999999999 599999999984
Q ss_pred ccCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCC-
Q 047768 771 DFKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDM- 849 (1009)
Q Consensus 771 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~- 849 (1009)
++....|+|||-|.||+|.+.++++.. +++.++..+..+||.||.|||.+ ||.|||+||+|||-....
T Consensus 146 --Edd~~FYLVfEKm~GGplLshI~~~~~------F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~ 214 (463)
T KOG0607|consen 146 --EDDTRFYLVFEKMRGGPLLSHIQKRKH------FNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNK 214 (463)
T ss_pred --cccceEEEEEecccCchHHHHHHHhhh------ccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCC
Confidence 455788999999999999999998774 99999999999999999999999 999999999999996654
Q ss_pred --ceEEeccccccccCCCCCCCccccCCccccccccccccCccccC-----CCCCCCcccchHHHHHHHHHHhCCCCCcc
Q 047768 850 --VAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGL-----GGEASMRGGVYSYGILLLEIFTRRRPTES 922 (1009)
Q Consensus 850 --~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvvl~elltg~~p~~~ 922 (1009)
-||||||.++.-+.....-.. .+.......+|+..|||||+.. ...|+.++|.||+|||+|-|+.|..||-.
T Consensus 215 vsPvKiCDfDLgSg~k~~~~~sp-astP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG 293 (463)
T KOG0607|consen 215 VSPVKICDFDLGSGIKLNNDCSP-ASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVG 293 (463)
T ss_pred cCceeeeccccccccccCCCCCC-CCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccC
Confidence 589999998865443221111 1122334567999999999732 24578999999999999999999999976
Q ss_pred cccC
Q 047768 923 MFNE 926 (1009)
Q Consensus 923 ~~~~ 926 (1009)
...+
T Consensus 294 ~Cg~ 297 (463)
T KOG0607|consen 294 HCGA 297 (463)
T ss_pred ccCC
Confidence 5444
No 313
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2.3e-32 Score=299.14 Aligned_cols=249 Identities=21% Similarity=0.284 Sum_probs=198.0
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALV 781 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 781 (1009)
+|...+.||+|++|.||+|....+++.||+|+++.......+.+.+|+.+++.++|||++++++++.. ....++|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~-----~~~~~~v 94 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLV-----GDELWVV 94 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEc-----CCeEEEE
Confidence 34555799999999999999988899999999875544445678899999999999999999998654 3678999
Q ss_pred EeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccc
Q 047768 782 YEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 861 (1009)
Q Consensus 782 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~ 861 (1009)
+||+++++|.+++... .+++.++..++.|++.|++|||+. +++||||+|+||+++.++.++++|||.+..
T Consensus 95 ~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~ 164 (285)
T cd06648 95 MEFLEGGALTDIVTHT-------RMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQ 164 (285)
T ss_pred EeccCCCCHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchh
Confidence 9999999999998773 278999999999999999999999 999999999999999999999999998875
Q ss_pred cCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccch
Q 047768 862 LSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEK 941 (1009)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 941 (1009)
..... .......|+..|+|||...+..++.++|||||||++|||++|+.||.... .........
T Consensus 165 ~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~-----~~~~~~~~~--- 228 (285)
T cd06648 165 VSKEV--------PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEP-----PLQAMKRIR--- 228 (285)
T ss_pred hccCC--------cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCC-----HHHHHHHHH---
Confidence 43211 11123458899999999998899999999999999999999999986321 111111100
Q ss_pred hhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 942 VMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 942 ~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
....+.... .......+.+++.+|++.+|++||++.|+++
T Consensus 229 --~~~~~~~~~------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 229 --DNLPPKLKN------------LHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred --hcCCCCCcc------------cccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 000000000 0012346889999999999999999999985
No 314
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.3e-32 Score=298.43 Aligned_cols=261 Identities=23% Similarity=0.304 Sum_probs=203.1
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc-ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ-KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
++|++.+.||.|+||+||+|....++..||+|++.... ....+.+.+|++.++.++|+|++++++.+.. ....+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 75 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVV-----GDELW 75 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEee-----CCEEE
Confidence 47889999999999999999998889999999986433 2245678999999999999999999988654 36789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+|+||+++++|.++++..... ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.+|++|||++
T Consensus 76 iv~e~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~ 149 (267)
T cd06610 76 LVMPYLSGGSLLDIMKSSYPR---GGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVS 149 (267)
T ss_pred EEEeccCCCcHHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchH
Confidence 999999999999999764321 1388999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
.......... ........|+..|+|||++... .++.++|||||||++|||++|+.||....... .......
T Consensus 150 ~~~~~~~~~~----~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-~~~~~~~--- 221 (267)
T cd06610 150 ASLADGGDRT----RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK-VLMLTLQ--- 221 (267)
T ss_pred HHhccCcccc----ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh-hHHHHhc---
Confidence 8765432110 0112335688999999998877 78999999999999999999999997432211 1111110
Q ss_pred cchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 939 PEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 939 ~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.. .+.+... ........++.+++.+|++.||++||++.|+++
T Consensus 222 -~~-----~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 222 -ND-----PPSLETG---------ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred -CC-----CCCcCCc---------cccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00 0000000 001123456789999999999999999999975
No 315
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=5e-33 Score=304.67 Aligned_cols=272 Identities=22% Similarity=0.298 Sum_probs=195.2
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
+|+..+.||+|++|.||+|+++.+++.||||+++.... ...+.+.+|++++++++||||+++++++.. ....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-----ENKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhccc-----CCcEE
Confidence 47788999999999999999988999999999864432 223578899999999999999999998643 36789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+||||+. ++|.+++..... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+|++|||++
T Consensus 76 ~v~e~~~-~~l~~~~~~~~~----~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~ 147 (284)
T cd07860 76 LVFEFLH-QDLKKFMDASPL----SGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 147 (284)
T ss_pred EEeeccc-cCHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccch
Confidence 9999995 689998876432 2489999999999999999999998 9999999999999999999999999998
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCC-CCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGE-ASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
+...... .......++..|+|||+..+.. ++.++|||||||++|||+||+.||...... ....+......
T Consensus 148 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~-~~~~~~~~~~~ 218 (284)
T cd07860 148 RAFGVPV--------RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLG 218 (284)
T ss_pred hhcccCc--------cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHhC
Confidence 7654321 1112234688999999876644 588999999999999999999998642211 11111111100
Q ss_pred -cc-hhhhccCCC---CCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 939 -PE-KVMEIVDPS---LLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 939 -~~-~~~~~~d~~---l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
+. .....+... ....+................++.+++.+|++.||++|||++|++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 219 TPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred CCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 00 000000000 0000000000000000012245678999999999999999999975
No 316
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.2e-32 Score=300.19 Aligned_cols=248 Identities=23% Similarity=0.329 Sum_probs=198.2
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc-ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ-KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
-|+..+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|++++++++||||+++++++... ...++
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~l 79 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD-----TKLWI 79 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeC-----CeEEE
Confidence 4677889999999999999998889999999986433 22345788999999999999999999987543 67899
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
|+||+++++|.+++... .+++..+..++.+++.|+.|||+. +++|+||+|+||+++.++.++++|||++.
T Consensus 80 v~e~~~~~~l~~~i~~~-------~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06641 80 IMEYLGGGSALDLLEPG-------PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAG 149 (277)
T ss_pred EEEeCCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccce
Confidence 99999999999998753 278999999999999999999998 99999999999999999999999999987
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccc
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPE 940 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 940 (1009)
...... .......++..|+|||.+.+..++.++|||||||++|||++|..||..... ....... ..
T Consensus 150 ~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~-~~ 215 (277)
T cd06641 150 QLTDTQ--------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP-----MKVLFLI-PK 215 (277)
T ss_pred ecccch--------hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch-----HHHHHHH-hc
Confidence 654321 111224578899999999888899999999999999999999999864221 1111110 00
Q ss_pred hhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 941 KVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 941 ~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
. .. + ........++.+++.+|++.+|..||++.++++.
T Consensus 216 ~-------~~-~----------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 216 N-------NP-P----------TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred C-------CC-C----------CCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0 00 0 0011233457799999999999999999999984
No 317
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.2e-32 Score=296.89 Aligned_cols=250 Identities=23% Similarity=0.338 Sum_probs=198.6
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
+|.+.+.||+|+||.||+|..+.+|..||+|.+..... ...+.+.+|++++++++|+|++++++++.. ....+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~-----~~~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQE-----NGRLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheecc-----CCeEE
Confidence 47788999999999999999998999999999865421 234678899999999999999999998654 36789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCC-ceEEecccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDM-VAHVSDFGL 858 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~-~~kl~DfGl 858 (1009)
+|+||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++|+||||+||++++++ .+|++|||.
T Consensus 76 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~ 148 (257)
T cd08225 76 IVMEYCDGGDLMKRINRQRG----VLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGI 148 (257)
T ss_pred EEEecCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEeccccc
Confidence 99999999999999976442 2378999999999999999999998 999999999999999886 569999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhc
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
+....... .......|++.|+|||+..+..++.++||||||+++|||++|+.||.... ..+......
T Consensus 149 ~~~~~~~~--------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~ 215 (257)
T cd08225 149 ARQLNDSM--------ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-----LHQLVLKIC 215 (257)
T ss_pred chhccCCc--------ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHh
Confidence 97654321 11122458899999999988899999999999999999999999986321 222222111
Q ss_pred cchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 939 PEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 939 ~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
... ..... ......+.+++.+|+..+|++|||+.|+++
T Consensus 216 ~~~--------~~~~~-----------~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 216 QGY--------FAPIS-----------PNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred ccc--------CCCCC-----------CCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 111 10000 012235789999999999999999999975
No 318
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1e-32 Score=302.85 Aligned_cols=273 Identities=23% Similarity=0.336 Sum_probs=200.1
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc--ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ--KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
++|++.+.||+|+||.||+|.++.+++.||||+++... ....+.+.+|++++++++|+||+++++++.. .+..
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~ 75 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR-----KGRL 75 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE-----CCEE
Confidence 36888999999999999999999889999999986432 2234678999999999999999999999754 3678
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
++|+||++++.+..+..... .+++.+++.++.+++.|++|||+. +++||||+|+||++++++.+||+|||+
T Consensus 76 ~iv~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~ 146 (288)
T cd07833 76 YLVFEYVERTLLELLEASPG------GLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGF 146 (288)
T ss_pred EEEEecCCCCHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeec
Confidence 99999998877766554432 288999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH--
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK-- 935 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~-- 935 (1009)
+........ .......++..|+|||++.+. .++.++||||||+++|||++|+.||......+ .......
T Consensus 147 ~~~~~~~~~-------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~ 218 (288)
T cd07833 147 ARALRARPA-------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID-QLYLIQKCL 218 (288)
T ss_pred ccccCCCcc-------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHh
Confidence 987654321 112234678899999999888 88999999999999999999999986432110 0000000
Q ss_pred HhccchhhhccC--CCCCC----hhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 936 RALPEKVMEIVD--PSLLP----LEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 936 ~~~~~~~~~~~d--~~l~~----~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
...+........ +.... ..................++.+++.+|+..+|++||++++++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 219 GPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred CCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 001111000000 00000 0000000000011123567899999999999999999999875
No 319
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2.3e-32 Score=303.64 Aligned_cols=281 Identities=20% Similarity=0.328 Sum_probs=199.6
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc--chHHHHHHHHHHHhcCCCCcceEEeeeecccc---CC
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG--GSKSFAAECEALRSIRHRNLIKIVTICSSIDF---KG 774 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---~~ 774 (1009)
.++|++.+.||+|+||.||+|....+++.||||++...... ....+.+|++++++++||||++++++|..... ..
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 45799999999999999999999989999999998644322 23456789999999999999999999865422 12
Q ss_pred CceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEe
Q 047768 775 VDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 854 (1009)
Q Consensus 775 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~ 854 (1009)
....++||||+. +++.+++..... .+++.+++.++.|++.|+.|||++ +++||||||+||+++.++.+||+
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~ 161 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSNKNV-----KFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLA 161 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEEC
Confidence 345699999996 588888876542 389999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHH
Q 047768 855 DFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEF 933 (1009)
Q Consensus 855 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~ 933 (1009)
|||++.......... ........++..|+|||.+.+. .++.++||||||+++|||++|+.||...... .....
T Consensus 162 dfg~~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~--~~~~~ 235 (310)
T cd07865 162 DFGLARAFSLSKNSK----PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQ--HQLTL 235 (310)
T ss_pred cCCCcccccCCcccC----CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence 999998765432110 1112234578899999987664 4688999999999999999999998643211 11111
Q ss_pred HHH---hccchhh-h-----ccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 934 AKR---ALPEKVM-E-----IVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 934 ~~~---~~~~~~~-~-----~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
... ..+.+.. + ..+....+....+.........-....+.+++.+|++.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 236 ISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred HHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 111 1111110 0 000000000000000000000011235678999999999999999999975
No 320
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.7e-32 Score=301.14 Aligned_cols=245 Identities=25% Similarity=0.285 Sum_probs=197.4
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
++|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|++++++++||||+++++++.. ...
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQD-----DSN 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEc-----CCe
Confidence 36888999999999999999999889999999986432 1234568899999999999999999998654 367
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++||||+++++|.+++.... .+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.+||+|||
T Consensus 76 ~~~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg 146 (290)
T cd05580 76 LYLVMEYVPGGELFSHLRKSG------RFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFG 146 (290)
T ss_pred EEEEEecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCC
Confidence 899999999999999998764 388999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
+++..... .....|++.|+|||.+.+..++.++||||||+++|||++|+.||.... ........
T Consensus 147 ~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~ 210 (290)
T cd05580 147 FAKRVKGR-----------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN-----PIQIYEKI 210 (290)
T ss_pred CccccCCC-----------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHH
Confidence 99865432 123457899999999988889999999999999999999999986432 11111111
Q ss_pred ccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 047768 938 LPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRM-----EMTDVVV 995 (1009)
Q Consensus 938 ~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rp-----t~~evl~ 995 (1009)
. .... ..+ ......+.+++.+|+..+|.+|| +++|+++
T Consensus 211 ~--------~~~~-~~~-----------~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 211 L--------EGKV-RFP-----------SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred h--------cCCc-cCC-----------ccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 1 0000 000 01123567899999999999999 6666653
No 321
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.4e-32 Score=303.04 Aligned_cols=281 Identities=20% Similarity=0.243 Sum_probs=198.5
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhcC-CCCcceEEeeeeccccCCCce
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSIR-HRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~ 777 (1009)
++|++.+.||+|+||.||+|.+..+++.||||+++.... .....+.+|++++++++ ||||+++++++...+..+...
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 368889999999999999999998999999999865432 23467888999999995 699999999876653333345
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCC-CCceEEecc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDH-DMVAHVSDF 856 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~-~~~~kl~Df 856 (1009)
.++||||+++ +|.+++...... ....+++..++.++.|++.||.|||++ +|+||||+|+||+++. ++.+||+||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~df 155 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRG-PGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADL 155 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhccc-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeec
Confidence 7999999975 899988754321 113489999999999999999999999 9999999999999998 899999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 935 (1009)
|+++...... .......+++.|+|||++.+ ..++.++||||||+++|||++|+.||....... .......
T Consensus 156 g~~~~~~~~~--------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~ 226 (295)
T cd07837 156 GLGRAFSIPV--------KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ-QLLHIFK 226 (295)
T ss_pred ccceecCCCc--------cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHH
Confidence 9998653321 11112346788999998765 457899999999999999999999987432111 0111110
Q ss_pred Hhc-cch--hhhccCCC-CCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 936 RAL-PEK--VMEIVDPS-LLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 936 ~~~-~~~--~~~~~d~~-l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
... +.. .....+.. ....+..++............++.+++.+|+..+|++||++.|++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 227 LLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred HhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000 000 00000000 0000000000000001123456789999999999999999999875
No 322
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.6e-32 Score=304.46 Aligned_cols=274 Identities=24% Similarity=0.301 Sum_probs=198.1
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc--chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG--GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
.++|++.+.||+|+||.||+|.++.+|+.||+|+++..... ....+.+|++++++++|+|++++++++... ....
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~ 82 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGK---HLDS 82 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecC---CCCe
Confidence 46899999999999999999999989999999998754322 234567899999999999999999986532 2246
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++||||++ ++|.+++..... .+++.++..++.|++.|++|||+. +++||||||+||++++++.+||+|||
T Consensus 83 ~~lv~e~~~-~~l~~~l~~~~~-----~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg 153 (309)
T cd07845 83 IFLVMEYCE-QDLASLLDNMPT-----PFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFG 153 (309)
T ss_pred EEEEEecCC-CCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccc
Confidence 799999996 589888876442 389999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHH
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKR 936 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 936 (1009)
+++...... .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||....... ...... .
T Consensus 154 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~-~~~~~~-~ 223 (309)
T cd07845 154 LARTYGLPA--------KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE-QLDLII-Q 223 (309)
T ss_pred eeeecCCcc--------CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH-H
Confidence 998664321 11122345788999998865 457899999999999999999999997432211 111111 1
Q ss_pred hccchhhhcc----CCCC---CChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 937 ALPEKVMEIV----DPSL---LPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 937 ~~~~~~~~~~----d~~l---~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.......... +... .....................+.+++.+|++.||++|||+.|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 224 LLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred hcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 1110000000 0000 000000000000000112345678999999999999999999986
No 323
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.9e-32 Score=301.51 Aligned_cols=273 Identities=21% Similarity=0.280 Sum_probs=198.5
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc--chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG--GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
++|++.+.||+|+||.||+|.++.+++.||+|.++..... ....+.+|++++++++||||+++++++... .....
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~---~~~~~ 81 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGS---NLDKI 81 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEec---CCCcE
Confidence 5788899999999999999999988999999999754322 234567899999999999999999987542 23678
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
++|+||++ ++|.+++..... .+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+
T Consensus 82 ~lv~e~~~-~~L~~~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~ 152 (293)
T cd07843 82 YMVMEYVE-HDLKSLMETMKQ-----PFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGL 152 (293)
T ss_pred EEEehhcC-cCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCc
Confidence 99999996 599999876543 389999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
++...... .......++..|+|||.+.+. .++.++||||+|+++|||++|+.||....... ...+.....
T Consensus 153 ~~~~~~~~--------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~ 223 (293)
T cd07843 153 AREYGSPL--------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEID-QLNKIFKLL 223 (293)
T ss_pred eeeccCCc--------cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHh
Confidence 98665421 111234578899999988764 46899999999999999999999987432210 011111000
Q ss_pred ---ccchhhhccC------CCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 938 ---LPEKVMEIVD------PSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 938 ---~~~~~~~~~d------~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.+.....+.+ .........+. ..........+.+.+++.+|++.+|++|||+.|++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 224 GTPTEKIWPGFSELPGAKKKTFTKYPYNQL-RKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred CCCchHHHHHhhccchhcccccccccchhh-hccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 0000000000 00000000000 000000002455789999999999999999999975
No 324
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.1e-32 Score=297.36 Aligned_cols=248 Identities=23% Similarity=0.318 Sum_probs=199.2
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
+|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|++++++++||||+++++++. +....
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQ-----DEENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhc-----CCCeE
Confidence 47888999999999999999988899999999964432 23568899999999999999999998754 34788
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
++|+||+++++|.+++.... .+++.++..++.|+++|+.|||+. +++|+||+|+||++++++.++++|||.
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~ 146 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQKV------KFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNI 146 (258)
T ss_pred EEEEeCCCCCCHHHHHHhcC------CcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeeccc
Confidence 99999999999999997753 388999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhc
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
+....... ......|+..|+|||.+.+..++.++||||+|+++|+|++|+.||...... ........
T Consensus 147 ~~~~~~~~---------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~-- 213 (258)
T cd05578 147 ATKVTPDT---------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT--IRDQIRAK-- 213 (258)
T ss_pred ccccCCCc---------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc--HHHHHHHH--
Confidence 88654321 112345788999999999888999999999999999999999998754322 11111110
Q ss_pred cchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCH--HHHH
Q 047768 939 PEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEM--TDVV 994 (1009)
Q Consensus 939 ~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~--~evl 994 (1009)
........ +...+..+.+++.+|++.||.+||++ +|++
T Consensus 214 -------~~~~~~~~-----------~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 214 -------QETADVLY-----------PATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred -------hccccccC-----------cccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 00000000 11233567899999999999999999 6654
No 325
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2.5e-32 Score=299.35 Aligned_cols=254 Identities=24% Similarity=0.312 Sum_probs=203.5
Q ss_pred HhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
..+.|++.+.+|+|+||.||+|.+..+++.||+|+++.... ..+.+.+|++++++++|+|++++++++... ...
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~ 90 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVG-----DEL 90 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEEC-----CEE
Confidence 45678888999999999999999988899999999975543 456788999999999999999999987653 678
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
++|+||+++++|.+++..+.. .+++..+..++.+++.|++|||+. +++|+||+|+||+++.++.++|+|||+
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~-----~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~ 162 (286)
T cd06614 91 WVVMEYMDGGSLTDIITQNFV-----RMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGF 162 (286)
T ss_pred EEEEeccCCCcHHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccch
Confidence 999999999999999988652 389999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhc
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
+....... .......++..|+|||++.+..++.++|||||||++|||++|+.||...... ......
T Consensus 163 ~~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~-----~~~~~~- 228 (286)
T cd06614 163 AAQLTKEK--------SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL-----RALFLI- 228 (286)
T ss_pred hhhhccch--------hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHH-
Confidence 87554321 1112345788999999999889999999999999999999999998632211 111000
Q ss_pred cchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 939 PEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 939 ~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
......... ....+...+.+++.+|++.+|.+||++.++++.
T Consensus 229 -------~~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 229 -------TTKGIPPLK---------NPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred -------HhcCCCCCc---------chhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 000000000 011234568899999999999999999999863
No 326
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.1e-32 Score=301.90 Aligned_cols=271 Identities=22% Similarity=0.320 Sum_probs=196.1
Q ss_pred CccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEE
Q 047768 703 FSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
|++.+.||+|++|.||+|.++.+|+.||+|++..... ...+.+.+|++++++++|||++++++++.. ....++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~-----~~~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHS-----ENKLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheecc-----CCeEEE
Confidence 5678899999999999999988999999999875432 233578889999999999999999998754 377899
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
|+||++ ++|.+++..... ..+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|+|||+++
T Consensus 76 v~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~ 147 (283)
T cd07835 76 VFEFLD-LDLKKYMDSSPL----TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLAR 147 (283)
T ss_pred EEeccC-cCHHHHHhhCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeeccccc
Confidence 999994 699999876542 2389999999999999999999998 99999999999999999999999999997
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhc-
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRAL- 938 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~- 938 (1009)
...... .......++..|+|||++.+. .++.++||||||+++|||++|+.||....... ...+......
T Consensus 148 ~~~~~~--------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~ 218 (283)
T cd07835 148 AFGVPV--------RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID-QLFRIFRTLGT 218 (283)
T ss_pred ccCCCc--------cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCC
Confidence 553211 111123468899999987664 56889999999999999999999986432111 1111111100
Q ss_pred cch-hhhccCC--C-CCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 939 PEK-VMEIVDP--S-LLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 939 ~~~-~~~~~d~--~-l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
+.. ....... . ....+.................+.+++.+|++.||++|||+.|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 219 PDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred CChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000 0000000 0 0000000000000001112246789999999999999999999975
No 327
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=3.2e-32 Score=296.90 Aligned_cols=243 Identities=23% Similarity=0.275 Sum_probs=184.8
Q ss_pred cccccCCceEEEEEEecCCeEEEEEEeeccccc---chHHHHHHHHHHHh---cCCCCcceEEeeeeccccCCCceEEEE
Q 047768 708 TIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG---GSKSFAAECEALRS---IRHRNLIKIVTICSSIDFKGVDFKALV 781 (1009)
Q Consensus 708 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~---l~h~niv~l~~~~~~~~~~~~~~~~lv 781 (1009)
.||+|+||.||+|....+++.||+|.+...... ....+.+|..+++. .+||+++.+.+++.. .+..++|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHT-----PDKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEec-----CCeEEEE
Confidence 489999999999999888999999998643221 12334445444433 479999999888654 3678999
Q ss_pred EeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccc
Q 047768 782 YEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 861 (1009)
Q Consensus 782 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~ 861 (1009)
|||+++|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||++++++.+|++|||++..
T Consensus 76 ~e~~~~~~L~~~i~~~~------~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~ 146 (279)
T cd05633 76 LDLMNGGDLHYHLSQHG------VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 146 (279)
T ss_pred EecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCccee
Confidence 99999999999987654 389999999999999999999999 999999999999999999999999999875
Q ss_pred cCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccc
Q 047768 862 LSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPE 940 (1009)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 940 (1009)
..... .....|+..|+|||...+ ..++.++||||+||++|||++|+.||....... ..........
T Consensus 147 ~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~~~~~- 213 (279)
T cd05633 147 FSKKK----------PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEIDRMTLT- 213 (279)
T ss_pred ccccC----------ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcC--HHHHHHHhhc-
Confidence 53221 112458999999998864 567999999999999999999999997432221 1111110000
Q ss_pred hhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 047768 941 KVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRM-----EMTDVVVK 996 (1009)
Q Consensus 941 ~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rp-----t~~evl~~ 996 (1009)
....+ ......++.+++.+|++.||++|| +++|+++.
T Consensus 214 -----~~~~~--------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 214 -----VNVEL--------------PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred -----CCcCC--------------ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 00000 112334678999999999999999 59888774
No 328
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.2e-32 Score=308.83 Aligned_cols=277 Identities=22% Similarity=0.242 Sum_probs=201.8
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecc--cccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLE--QKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
.++|.+.+.||+|+||+||+|....+++.||||.++.. .....+.+.+|+.+++.++|+||+++++++..........
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 35788999999999999999999989999999998643 2223456778999999999999999999876543333356
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++|+||+. ++|.+++.... .+++..+..++.|++.|+.|||++ +++||||||+||+++.++.+||+|||
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg 153 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQ------TLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFG 153 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCc
Confidence 899999995 78999887654 389999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHH
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKR 936 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 936 (1009)
+++...... .......++..|+|||.+.. ..++.++|||||||++|||++|+.||...... ........
T Consensus 154 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~~~~ 223 (337)
T cd07858 154 LARTTSEKG--------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYV--HQLKLITE 223 (337)
T ss_pred cccccCCCc--------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChH--HHHHHHHH
Confidence 998654321 11123457889999998765 46899999999999999999999998643110 00000000
Q ss_pred h----ccchhhhccCCCCCChhhhhhhc----cccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 937 A----LPEKVMEIVDPSLLPLEEERTNS----RRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 937 ~----~~~~~~~~~d~~l~~~~~~r~~~----~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
. .++....+.+..........+.. .......+..++.+++.+|++.+|++|||+.|+++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 224 LLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred HhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 0 00011011111000000000000 000011234567899999999999999999999876
No 329
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=4e-32 Score=302.06 Aligned_cols=247 Identities=26% Similarity=0.333 Sum_probs=193.9
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc---chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG---GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
.|...+.||+|+||.||+|++..++..||+|++...... ....+.+|++++++++|||++++++++... ...
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~ 100 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLRE-----HTA 100 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC-----CeE
Confidence 366778899999999999999888999999998643222 234688899999999999999999987643 578
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
++||||+. |++.+++..... .+++.++..++.+++.|+.|||+. +|+||||+|+||+++.++.+||+|||+
T Consensus 101 ~lv~e~~~-g~l~~~~~~~~~-----~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~ 171 (317)
T cd06635 101 WLVMEYCL-GSASDLLEVHKK-----PLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGS 171 (317)
T ss_pred EEEEeCCC-CCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCC
Confidence 99999996 588888765443 389999999999999999999999 999999999999999999999999998
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccC---CCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGL---GGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 935 (1009)
+...... ....|+..|+|||++. .+.++.++|||||||++|||++|+.||....... ....+.
T Consensus 172 ~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~~~- 237 (317)
T cd06635 172 ASIASPA------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIA- 237 (317)
T ss_pred ccccCCc------------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHH-
Confidence 8754321 1245788999999874 4578999999999999999999999986431110 001110
Q ss_pred HhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 047768 936 RALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKL 997 (1009)
Q Consensus 936 ~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L 997 (1009)
...... .....+...+.+++.+|++.+|.+||++.|+++..
T Consensus 238 -----------~~~~~~----------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 238 -----------QNESPT----------LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred -----------hccCCC----------CCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 000000 00112344678999999999999999999999754
No 330
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=3.2e-32 Score=303.32 Aligned_cols=210 Identities=25% Similarity=0.365 Sum_probs=171.0
Q ss_pred cCccCCcccccCCceEEEEEEec--CCeEEEEEEeeccc---ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCc
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHE--NGMLVAVKVINLEQ---KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVD 776 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 776 (1009)
+|.+.+.||+|+||.||+|.++. +++.||+|.+.... ......+.+|+.++++++||||+++++++... ...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH---ADK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC---CCc
Confidence 47788899999999999999987 78999999997533 33346778899999999999999999997642 236
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCC----CCceE
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDH----DMVAH 852 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~----~~~~k 852 (1009)
..++||||++ +++.+++....... ...+++..++.++.|++.|+.|||+. +|+||||||+||+++. ++.+|
T Consensus 78 ~~~lv~e~~~-~~l~~~~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~k 152 (316)
T cd07842 78 SVYLLFDYAE-HDLWQIIKFHRQAK-RVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVK 152 (316)
T ss_pred eEEEEEeCCC-cCHHHHHHhhccCC-CcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEE
Confidence 7899999996 47777775433211 12488999999999999999999999 9999999999999999 99999
Q ss_pred EeccccccccCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccc
Q 047768 853 VSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMF 924 (1009)
Q Consensus 853 l~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~ 924 (1009)
++|||+++....... .........++..|+|||++.+. .++.++|||||||++|||++|+.||....
T Consensus 153 l~Dfg~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~ 220 (316)
T cd07842 153 IGDLGLARLFNAPLK-----PLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGRE 220 (316)
T ss_pred ECCCccccccCCCcc-----cccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCc
Confidence 999999987644321 01122345678999999987664 57899999999999999999999997543
No 331
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=2e-32 Score=306.89 Aligned_cols=280 Identities=21% Similarity=0.261 Sum_probs=202.5
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
.++|++.+.||+|+||.||+|..+.+++.||+|++..... ...+.+.+|+.++++++||||+++++++.... .....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~ 82 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG-ADFKD 82 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-CCCce
Confidence 3689999999999999999999998999999999864422 23456788999999999999999998765432 33457
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++|+||+. ++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg 152 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHSDQ------PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFG 152 (334)
T ss_pred EEEEEehhh-hhHHHHhccCC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccc
Confidence 899999995 69999887543 289999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHH
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKR 936 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 936 (1009)
+++........ .........|+..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ........
T Consensus 153 ~~~~~~~~~~~----~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~--~~~~~~~~ 226 (334)
T cd07855 153 MARGLSSSPTE----HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV--HQLKLILS 226 (334)
T ss_pred cceeecccCcC----CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH--HHHHHHHH
Confidence 99866442211 1112234568899999998766 46899999999999999999999999643211 00011111
Q ss_pred hccchhhhccCCCCCC--------hhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 937 ALPEKVMEIVDPSLLP--------LEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 937 ~~~~~~~~~~d~~l~~--------~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
.......++.+..... .+......-.........++.+++.+|++.+|++||++++++..
T Consensus 227 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 227 VLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred HhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 1000000000000000 00000000000001234568899999999999999999998874
No 332
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-33 Score=294.83 Aligned_cols=202 Identities=26% Similarity=0.384 Sum_probs=176.3
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecc---cccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCc
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLE---QKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVD 776 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 776 (1009)
.+.|..-++||+|+||+||-++.+.+|+.+|.|.+... ..........|-.++.+++.+.||.+--. ++..+
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYA-----feTkd 258 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYA-----FETKD 258 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeee-----ecCCC
Confidence 46788889999999999999999999999999988533 23344567789999999999988776433 45668
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
..|+|+..|.||+|.-.+.+... ..+++..+..+|.+|+.||++||.. +||+||+||+|||+|+.|+|+|+|.
T Consensus 259 ~LClVLtlMNGGDLkfHiyn~g~----~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDL 331 (591)
T KOG0986|consen 259 ALCLVLTLMNGGDLKFHIYNHGN----PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDL 331 (591)
T ss_pred ceEEEEEeecCCceeEEeeccCC----CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeecc
Confidence 99999999999999888877654 3499999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcc
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTES 922 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~ 922 (1009)
|+|..+..+ ....+.+||.+|||||++.++.|+...|-||+||++|||+.|+.||..
T Consensus 332 GLAvei~~g---------~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~ 388 (591)
T KOG0986|consen 332 GLAVEIPEG---------KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQ 388 (591)
T ss_pred ceEEecCCC---------CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhh
Confidence 999987654 233346899999999999999999999999999999999999999964
No 333
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=3.6e-32 Score=297.92 Aligned_cols=273 Identities=21% Similarity=0.295 Sum_probs=198.5
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc-cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
+|++.++||+|++|.||+|++..+|+.||||+++.... ...+.+.+|++++++++|+||+++++++... +..++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~l 75 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTE-----NKLML 75 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeC-----CcEEE
Confidence 47888999999999999999998999999999975533 2346678899999999999999999987643 67899
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
||||++ ++|.+++...... ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.+|++|||+++
T Consensus 76 v~e~~~-~~l~~~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~ 148 (284)
T cd07836 76 VFEYMD-KDLKKYMDTHGVR---GALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLAR 148 (284)
T ss_pred EEecCC-ccHHHHHHhcCCC---CCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhh
Confidence 999997 5899988765421 2489999999999999999999998 99999999999999999999999999997
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh--
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA-- 937 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~-- 937 (1009)
...... .......++..|+|||++.+. .++.++|||||||++|||++|+.||....... .........
T Consensus 149 ~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~ 219 (284)
T cd07836 149 AFGIPV--------NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED-QLLKIFRIMGT 219 (284)
T ss_pred hhcCCc--------cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCC
Confidence 553321 111224568899999987664 56889999999999999999999987532211 111111100
Q ss_pred -ccchhhhccC--CCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 938 -LPEKVMEIVD--PSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 938 -~~~~~~~~~d--~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.......+.+ ......+.................+.+++.+|++.||.+||+++|+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 220 PTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred CChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000111100 000000000000000001122456789999999999999999999975
No 334
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=3e-32 Score=304.55 Aligned_cols=276 Identities=20% Similarity=0.245 Sum_probs=192.7
Q ss_pred Cccccc--CCceEEEEEEecCCeEEEEEEeeccccc--chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEE
Q 047768 707 NTIGRG--SFGFVYKGVLHENGMLVAVKVINLEQKG--GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVY 782 (1009)
Q Consensus 707 ~~lg~G--~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 782 (1009)
..||+| +||+||+|++..+|+.||||++...... ..+.+.+|+.+++.++||||+++++++.. .+..++|+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~-----~~~~~~v~ 78 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTT-----GSWLWVIS 78 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEec-----CCceEEEE
Confidence 346666 8999999999889999999998654322 24678899999999999999999999764 36789999
Q ss_pred eccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccccc
Q 047768 783 EYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 862 (1009)
Q Consensus 783 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~ 862 (1009)
||+.++++.+++...... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++||+.+...
T Consensus 79 e~~~~~~l~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~ 151 (328)
T cd08226 79 PFMAYGSANSLLKTYFPE----GMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSL 151 (328)
T ss_pred ecccCCCHHHHHHhhccc----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhh
Confidence 999999999998875421 388999999999999999999998 9999999999999999999999999866443
Q ss_pred CCCCCCCccccCCccccccccccccCccccCCC--CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccc
Q 047768 863 SASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG--EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPE 940 (1009)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 940 (1009)
.......... ........++..|+|||++.+. .++.++|||||||++|||++|+.||....................
T Consensus 152 ~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 230 (328)
T cd08226 152 VRNGQKAKVV-YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSP 230 (328)
T ss_pred hccCcccccc-ccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCC
Confidence 2211100000 0011112356779999998764 478999999999999999999999975432211000000000000
Q ss_pred --------hhhh-----------ccCCCCC----ChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 941 --------KVME-----------IVDPSLL----PLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 941 --------~~~~-----------~~d~~l~----~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
.... +.+.... ..... ..........+...+.+++.+|++.||++|||+.|+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 231 LDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTS-ERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred ccccccchhhhhhccchhhhhcccccchhcccccccccc-ccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0000 0000000 00000 000011123455678999999999999999999999753
No 335
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=2e-32 Score=307.37 Aligned_cols=275 Identities=21% Similarity=0.283 Sum_probs=200.2
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecc--cccchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCCCc
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLE--QKGGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKGVD 776 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~ 776 (1009)
.++|++.+.||+|+||.||+|.+..+++.||||++... .......+.+|+.+++++ +||||+++++++... ...
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~---~~~ 82 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAE---NDK 82 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccC---CCc
Confidence 46788899999999999999999888999999988532 122335677899999999 999999999987542 235
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
..++||||++ ++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~ 151 (337)
T cd07852 83 DIYLVFEYME-TDLHAVIRAN-------ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADF 151 (337)
T ss_pred eEEEEecccc-cCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeec
Confidence 6799999996 5999998764 278899999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 935 (1009)
|+++......... .........|+..|+|||++.+ ..++.++||||||+++|||++|+.||....... ...+...
T Consensus 152 g~~~~~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~-~~~~~~~ 227 (337)
T cd07852 152 GLARSLSELEENP---ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN-QLEKIIE 227 (337)
T ss_pred cchhccccccccc---cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHH
Confidence 9998765432110 0112233568999999998765 457899999999999999999999986432211 0111111
Q ss_pred Hh--cc-c--------hhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 936 RA--LP-E--------KVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 936 ~~--~~-~--------~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
.. .. + ...++++. ..... . ... .........++.+++.+|++.||++|||+.++++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~-~~~-~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 228 VIGPPSAEDIESIKSPFAATMLDS-LPSRP-R-KPL-DELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HhCCCCHHHHHHHHhhhHHHhhhh-ccccc-c-cch-hhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00 00 0 00011110 00000 0 000 00011134578899999999999999999999875
No 336
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=2.9e-32 Score=299.26 Aligned_cols=255 Identities=23% Similarity=0.286 Sum_probs=191.6
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc-cchHHHHHHHHHHHhcC-CCCcceEEeeeeccccCCCceEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-GGSKSFAAECEALRSIR-HRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
+|...+.||+|+||+||++.+..+++.||+|++..... .....+.+|+.++.++. |+||+++++++.. ....+
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~-----~~~~~ 79 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFR-----EGDCW 79 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEec-----CCcEE
Confidence 45566789999999999999998999999999864432 23457889999999996 9999999998653 35678
Q ss_pred EEEeccCCCCHHHHHh---ccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 780 LVYEYMQNGSLEEWLH---QRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~---~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
++|||+. +++.++.. .... ..+++..+..++.+++.|++|||+.. +|+||||||+||+++.++.+||+||
T Consensus 80 ~~~e~~~-~~l~~l~~~~~~~~~----~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~df 152 (288)
T cd06616 80 ICMELMD-ISLDKFYKYVYEVLK----SVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDF 152 (288)
T ss_pred EEEeccc-CCHHHHHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeec
Confidence 9999985 46655432 2111 24899999999999999999999742 8999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCCC---CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHH
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG---EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEF 933 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~ 933 (1009)
|+++...... ......|+..|+|||++.+. .++.++|||||||++|||++|+.||.... .....
T Consensus 153 g~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~~~ 219 (288)
T cd06616 153 GISGQLVDSI---------AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN----SVFDQ 219 (288)
T ss_pred chhHHhccCC---------ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc----hHHHH
Confidence 9997654321 11223578899999998776 68999999999999999999999986432 11111
Q ss_pred HHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 934 AKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 934 ~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
........ .+.+.. .....+..++.+++.+|++.+|++|||+.||++.
T Consensus 220 ~~~~~~~~-----~~~~~~----------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 220 LTQVVKGD-----PPILSN----------SEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred HhhhcCCC-----CCcCCC----------cCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11110000 000000 0011244568899999999999999999999874
No 337
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=3.8e-32 Score=300.52 Aligned_cols=281 Identities=23% Similarity=0.306 Sum_probs=201.4
Q ss_pred HHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeeccc----
Q 047768 698 KATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSID---- 771 (1009)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 771 (1009)
...++|++.+.||+|+||.||+|.++.+++.||||+++.... .....+.+|++++++++|||++++++++....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 356789999999999999999999998899999999975432 23356788999999999999999999876532
Q ss_pred -cCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCc
Q 047768 772 -FKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMV 850 (1009)
Q Consensus 772 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~ 850 (1009)
..+....++|+||+++ ++.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~ 154 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGLV-----HFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQ 154 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCc
Confidence 1123478999999975 78887776432 389999999999999999999999 9999999999999999999
Q ss_pred eEEeccccccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCcc
Q 047768 851 AHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLT 929 (1009)
Q Consensus 851 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~ 929 (1009)
+||+|||.+........ .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||..... ...
T Consensus 155 ~kl~dfg~~~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~-~~~ 226 (302)
T cd07864 155 IKLADFGLARLYNSEES-------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE-LAQ 226 (302)
T ss_pred EEeCcccccccccCCcc-------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-HHH
Confidence 99999999986654221 11112345788999998765 4578999999999999999999999864221 111
Q ss_pred HHHHHHHh---ccchhhhccCCCCCChhhhhhhc-cc--cccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 930 LHEFAKRA---LPEKVMEIVDPSLLPLEEERTNS-RR--VRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 930 ~~~~~~~~---~~~~~~~~~d~~l~~~~~~r~~~-~~--~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
+....... .+....++............... .. ......+..+.+++.+|++.+|.+||++.+++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 227 LELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11111111 11111111110000000000000 00 000112456889999999999999999999875
No 338
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=8.7e-32 Score=291.44 Aligned_cols=250 Identities=22% Similarity=0.291 Sum_probs=192.8
Q ss_pred HHHHHHhccCccCCcc--cccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhc-CCCCcceEEeeeecc
Q 047768 694 KELSKATNEFSSSNTI--GRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSI-RHRNLIKIVTICSSI 770 (1009)
Q Consensus 694 ~~~~~~~~~~~~~~~l--g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 770 (1009)
.+.....++|.+.+.+ |+|+||.||++..+.++..+|+|++...... . .|+.....+ +|||++++++++...
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~---~--~e~~~~~~~~~h~~iv~~~~~~~~~ 81 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN---A--IEPMVHQLMKDNPNFIKLYYSVTTL 81 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc---h--hhHHHHHHhhcCCCEEEEEEEEecC
Confidence 3444455677777776 9999999999999999999999998643221 1 122222222 799999999987643
Q ss_pred ccCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCC-
Q 047768 771 DFKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDM- 849 (1009)
Q Consensus 771 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~- 849 (1009)
...++||||+++++|.+++.... .+++.++..++.|+++|+.|||+. +++||||||+||+++.++
T Consensus 82 -----~~~~iv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~ 147 (267)
T PHA03390 82 -----KGHVLIMDYIKDGDLFDLLKKEG------KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKD 147 (267)
T ss_pred -----CeeEEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCC
Confidence 57899999999999999998754 389999999999999999999999 999999999999999998
Q ss_pred ceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCcc
Q 047768 850 VAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLT 929 (1009)
Q Consensus 850 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~ 929 (1009)
.++++|||+++..... ....|+..|+|||++.+..++.++||||+|+++|||++|+.||.........
T Consensus 148 ~~~l~dfg~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~ 215 (267)
T PHA03390 148 RIYLCDYGLCKIIGTP------------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELD 215 (267)
T ss_pred eEEEecCccceecCCC------------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhh
Confidence 9999999998765422 1235789999999999999999999999999999999999999754333322
Q ss_pred HHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCC-HHHHHH
Q 047768 930 LHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRME-MTDVVV 995 (1009)
Q Consensus 930 ~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt-~~evl~ 995 (1009)
...+.... .. ... ........+.+++.+|++.+|.+||+ ++|+++
T Consensus 216 ~~~~~~~~-~~--------~~~------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 216 LESLLKRQ-QK--------KLP------------FIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred HHHHHHhh-cc--------cCC------------cccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 22222111 00 000 00023345789999999999999996 588863
No 339
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=4.2e-32 Score=297.86 Aligned_cols=273 Identities=24% Similarity=0.313 Sum_probs=199.2
Q ss_pred CccCCcccccCCceEEEEEEecCCeEEEEEEeeccc--ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEE
Q 047768 703 FSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ--KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
|++.+.||+|+||.||+|.+..+++.||+|++.... ......+.+|++++++++|+|++++++++... .....++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~l 77 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSK---GKGSIYM 77 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecC---CCCcEEE
Confidence 567789999999999999999889999999997653 33346788999999999999999999997643 1367899
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
|+||++ ++|.+++..... .+++.+++.++.|+++|++|||+. +++|+||+|+||++++++.+|++|||++.
T Consensus 78 v~e~~~-~~l~~~~~~~~~-----~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~ 148 (287)
T cd07840 78 VFEYMD-HDLTGLLDSPEV-----KFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLAR 148 (287)
T ss_pred Eecccc-ccHHHHHhccCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEcccccee
Confidence 999997 589998876532 389999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhc-
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRAL- 938 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~- 938 (1009)
....... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... ...........
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~-~~~~~~~~~~~~ 220 (287)
T cd07840 149 PYTKRNS-------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL-EQLEKIFELCGS 220 (287)
T ss_pred eccCCCc-------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCC
Confidence 7654321 11223456788999997765 45789999999999999999999998743321 11111111100
Q ss_pred --cchhhhccCC----CCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 939 --PEKVMEIVDP----SLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 939 --~~~~~~~~d~----~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
........+. ...................+..++.+++.+|++.+|.+||++.++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 221 PTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred CchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0001000000 00000000000000111112567889999999999999999999975
No 340
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=5.4e-32 Score=296.17 Aligned_cols=269 Identities=20% Similarity=0.244 Sum_probs=193.4
Q ss_pred CccCCcccccCCceEEEEEEecCCeEEEEEEeecccc-cchHHHHHHHHHHHhcC-CCCcceEEeeeeccccCCCceEEE
Q 047768 703 FSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-GGSKSFAAECEALRSIR-HRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
|.+.+.||+|+||.||+|..+.+++.||+|+++.... .......+|+.+++++. |+|++++++++... ..+..++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~---~~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDR---KTGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecC---CCCcEEE
Confidence 5677899999999999999988999999999864422 22234457889999885 99999999987642 2256899
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
|+||++ |++.+++..... .+++.++..++.|++.||+|||+. +++||||+|+||+++. +.+||+|||+++
T Consensus 78 v~e~~~-~~l~~~l~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~ 147 (282)
T cd07831 78 VFELMD-MNLYELIKGRKR-----PLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCR 147 (282)
T ss_pred EEecCC-ccHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEeccccc
Confidence 999996 688888876442 389999999999999999999999 9999999999999999 999999999998
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhc-
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRAL- 938 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~- 938 (1009)
...... ......++..|+|||++.. ..++.++||||+||++|||++|+.||......+ .........
T Consensus 148 ~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~--~~~~~~~~~~ 216 (282)
T cd07831 148 GIYSKP---------PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD--QIAKIHDVLG 216 (282)
T ss_pred ccccCC---------CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH--HHHHHHHHcC
Confidence 654321 1122457889999997644 557899999999999999999999996432111 111111111
Q ss_pred --cchhhhccCCCCC---ChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 939 --PEKVMEIVDPSLL---PLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 939 --~~~~~~~~d~~l~---~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
++.+.......-. ..+................++.+++.+|++.+|++||++.|+++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 217 TPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred CCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 1111000000000 00000000000011133567899999999999999999999975
No 341
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=4.7e-33 Score=277.71 Aligned_cols=209 Identities=28% Similarity=0.382 Sum_probs=173.5
Q ss_pred hccCccCCcccccCCceEEEEEEecCC----eEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeeccccC
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENG----MLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFK 773 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~----~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 773 (1009)
...|+....||+|.||.||+|.-+.+. +.+|+|+|+.+.. +-.....+|+..++.++|||++.++.++..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~---- 98 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLS---- 98 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhc----
Confidence 347888999999999999999665332 3799999976543 234678899999999999999999987643
Q ss_pred CCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCC----C
Q 047768 774 GVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHD----M 849 (1009)
Q Consensus 774 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~----~ 849 (1009)
.....++++||.++ +|++.++-++.... ..++...++.|++||+.|+.|||++ -|+||||||.||||..+ |
T Consensus 99 ~d~~v~l~fdYAEh-DL~~II~fHr~~~~-~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG 173 (438)
T KOG0666|consen 99 HDKKVWLLFDYAEH-DLWHIIKFHRASKA-KQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERG 173 (438)
T ss_pred cCceEEEEehhhhh-hHHHHHHHhccchh-ccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccC
Confidence 24778999999977 99999987655443 4689999999999999999999999 89999999999999877 8
Q ss_pred ceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcc
Q 047768 850 VAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTES 922 (1009)
Q Consensus 850 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~ 922 (1009)
.|||+|||+||.+... ..+-.....++-|..|+|||.+.+. .||.+.||||.||++.||+|-++-|..
T Consensus 174 ~VKIaDlGlaR~~~~p-----lkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 174 RVKIADLGLARLFNNP-----LKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred eeEeecccHHHHhhcc-----ccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence 9999999999987643 1222334457789999999998885 689999999999999999998877653
No 342
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=7.9e-32 Score=295.67 Aligned_cols=275 Identities=23% Similarity=0.286 Sum_probs=198.0
Q ss_pred CccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc--chHHHHHHHHHHHhc---CCCCcceEEeeeeccccCCCce
Q 047768 703 FSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG--GSKSFAAECEALRSI---RHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
|++.+.||+|+||.||+|+++.+++.||+|+++..... ....+.+|+.+++++ +|+|++++++++...+......
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 56778999999999999999888999999999644322 234566788877666 5999999999987654334445
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.+++|||+. ++|.+++..... ..+++..++.++.|+++||+|||+. +++|+||+|+||+++.++.+||+|||
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~----~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg 152 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPK----PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFG 152 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccC
Confidence 899999996 589998876442 1489999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
.+....... ......++..|+|||++.+..++.++|||||||++|||++|+.||...... .....+....
T Consensus 153 ~~~~~~~~~---------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~ 222 (287)
T cd07838 153 LARIYSFEM---------ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA-DQLDKIFDVI 222 (287)
T ss_pred cceeccCCc---------ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH-HHHHHHHHHc
Confidence 997664321 112234788999999999999999999999999999999999988643211 1122221111
Q ss_pred ccchhhhcc-CCCCCC--hhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 938 LPEKVMEIV-DPSLLP--LEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 938 ~~~~~~~~~-d~~l~~--~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
......... ...... .+............+....+.+++.+|++.||++||++.|++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 223 GLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 000000000 000000 0000000000011123356779999999999999999999974
No 343
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.1e-31 Score=290.47 Aligned_cols=254 Identities=20% Similarity=0.268 Sum_probs=197.3
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc-----ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCC
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ-----KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 775 (1009)
.+|.+.+.||+|+||.||+|.+..+++.||+|++.... ......+.+|++++++++|+||+++++++... ..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~---~~ 78 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP---EE 78 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC---CC
Confidence 46888999999999999999998899999999875332 12235788999999999999999999986542 23
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
...++|+||+++++|.+++.... .+++.....++.|++.|+.|||+. +++||||||+||+++.++.++|+|
T Consensus 79 ~~~~~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~d 149 (264)
T cd06653 79 KKLSIFVEYMPGGSIKDQLKAYG------ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGD 149 (264)
T ss_pred CEEEEEEEeCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECc
Confidence 46789999999999999997654 278889999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 935 (1009)
||+++....... .........|+..|+|||++.+..++.++|||||||++||+++|+.||..... .... .
T Consensus 150 fg~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~-~ 219 (264)
T cd06653 150 FGASKRIQTICM-----SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA----MAAI-F 219 (264)
T ss_pred cccccccccccc-----cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH----HHHH-H
Confidence 999986543110 00112235688999999999988899999999999999999999999864211 1111 1
Q ss_pred HhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 936 RALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 936 ~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
........ +. .+....+++.+++.+|+. +|.+||++.+++.
T Consensus 220 ~~~~~~~~----~~--------------~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 220 KIATQPTK----PM--------------LPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred HHHcCCCC----CC--------------CCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 11000000 00 011223457899999999 5799999998865
No 344
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.2e-31 Score=288.02 Aligned_cols=250 Identities=26% Similarity=0.351 Sum_probs=202.1
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALV 781 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 781 (1009)
+|+..+.||+|++|.||+|.+..+++.||+|++........+.+.+|++++++++|++++++++++... ...+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~l~ 75 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKK-----DELWIV 75 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-----CeEEEE
Confidence 477889999999999999999888999999999765544567899999999999999999999986543 678999
Q ss_pred EeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccc
Q 047768 782 YEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 861 (1009)
Q Consensus 782 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~ 861 (1009)
+||+++++|.+++..... .+++.++..++.+++.|+.|||+. +++||||+|+||++++++.++|+|||.+..
T Consensus 76 ~e~~~~~~L~~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~ 147 (253)
T cd05122 76 MEFCSGGSLKDLLKSTNQ-----TLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQ 147 (253)
T ss_pred EecCCCCcHHHHHhhcCC-----CCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccc
Confidence 999999999999987642 389999999999999999999998 999999999999999999999999999986
Q ss_pred cCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccch
Q 047768 862 LSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEK 941 (1009)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 941 (1009)
...... .....++..|+|||.+.+..++.++||||||+++|+|++|+.||..... ...........
T Consensus 148 ~~~~~~---------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~ 213 (253)
T cd05122 148 LSDTKA---------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPP-----MKALFKIATNG 213 (253)
T ss_pred cccccc---------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCch-----HHHHHHHHhcC
Confidence 654311 2235678899999999988899999999999999999999999864321 11111000000
Q ss_pred hhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 942 VMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 942 ~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
..... ....+...+.+++.+|++.||++|||+.|+++
T Consensus 214 ~~~~~-----------------~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 214 PPGLR-----------------NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred CCCcC-----------------cccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00000 00112346889999999999999999999975
No 345
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=4e-32 Score=297.99 Aligned_cols=244 Identities=23% Similarity=0.321 Sum_probs=194.0
Q ss_pred CcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEeccC
Q 047768 707 NTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYEYMQ 786 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~ 786 (1009)
.+||+|+||.||+|..+.++..||||++........+.+.+|+.+++.++|+|++++++++.. .+..++||||++
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~~lv~e~~~ 100 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-----GDELWVVMEFLE 100 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEe-----CCEEEEEEecCC
Confidence 679999999999999988999999999865444445678899999999999999999998654 368899999999
Q ss_pred CCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccCCCC
Q 047768 787 NGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSASP 866 (1009)
Q Consensus 787 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~ 866 (1009)
+++|.+++.... +++.....++.|++.|++|||+. +++||||+|+||++++++.++++|||++.......
T Consensus 101 ~~~L~~~~~~~~-------~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~ 170 (292)
T cd06657 101 GGALTDIVTHTR-------MNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 170 (292)
T ss_pred CCcHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccc
Confidence 999999876532 78899999999999999999999 99999999999999999999999999887553211
Q ss_pred CCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchhhhcc
Q 047768 867 LGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKVMEIV 946 (1009)
Q Consensus 867 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 946 (1009)
.......|+..|+|||+..+..++.++||||+|+++|||++|+.||...... ..........+..
T Consensus 171 --------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~--~~~~~~~~~~~~~----- 235 (292)
T cd06657 171 --------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIRDNLPPK----- 235 (292)
T ss_pred --------ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhhCCcc-----
Confidence 1112345789999999998888999999999999999999999998632111 1111111111110
Q ss_pred CCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 947 DPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 947 d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
+... ......+.+++.+|++.+|.+||++.|+++
T Consensus 236 ---~~~~------------~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 236 ---LKNL------------HKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred ---cCCc------------ccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 0000 012234678899999999999999999987
No 346
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-33 Score=273.33 Aligned_cols=252 Identities=20% Similarity=0.263 Sum_probs=191.9
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc-cchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCCCceEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-GGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
+.....-||.|..|+||+++.+.+|..+|||.+..... ..-+++...++++..- ..|.||+.+||+... ...+
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n-----~dV~ 167 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITN-----TDVF 167 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeC-----chHH
Confidence 33445679999999999999999999999999964432 2235566677766655 489999999997542 4567
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+.||.|. ..+...++.-.. ++++.-.-++...+.+||.||.+++ +|+|||+||+|||+|+.|++|+||||++
T Consensus 168 IcMelMs-~C~ekLlkrik~-----piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIs 239 (391)
T KOG0983|consen 168 ICMELMS-TCAEKLLKRIKG-----PIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGIS 239 (391)
T ss_pred HHHHHHH-HHHHHHHHHhcC-----CchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeeccccc
Confidence 8899883 355566655443 4888888899999999999999886 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCC---CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHH
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG---GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKR 936 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 936 (1009)
.++.++. +.+...|.+.|||||.+.- ..|+.++||||||+.++|+.||+.||.....+-..+.+...
T Consensus 240 GrlvdSk---------AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln- 309 (391)
T KOG0983|consen 240 GRLVDSK---------AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN- 309 (391)
T ss_pred ceeeccc---------ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh-
Confidence 8776542 3334678999999998754 46899999999999999999999999865433222222221
Q ss_pred hccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 937 ALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 937 ~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
..| +++... ......+.+++..|++.|+.+||...++++.
T Consensus 310 ~eP--------P~L~~~------------~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 310 EEP--------PLLPGH------------MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred cCC--------CCCCcc------------cCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 111 111110 0133457899999999999999999988753
No 347
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1e-31 Score=298.77 Aligned_cols=266 Identities=21% Similarity=0.214 Sum_probs=189.1
Q ss_pred CCceEEEEEEecCCeEEEEEEeecc--cccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEeccCCCCH
Q 047768 713 SFGFVYKGVLHENGMLVAVKVINLE--QKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYEYMQNGSL 790 (1009)
Q Consensus 713 ~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL 790 (1009)
++|.||.++...+++.||||+++.. .....+.+.+|++++++++|+||+++++++.. ....+++|||+++|+|
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~-----~~~~~~~~e~~~~~~l 86 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIV-----DSELYVVSPLMAYGSC 86 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeec-----CCeEEEEEeccCCCCH
Confidence 4455666666668999999999754 22344689999999999999999999998654 3678999999999999
Q ss_pred HHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccCCCCCCCc
Q 047768 791 EEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSASPLGNV 870 (1009)
Q Consensus 791 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 870 (1009)
.+++...... .+++.....++.|++.||+|||++ +|+||||||+||+++.++.+|++|||.+..........
T Consensus 87 ~~~l~~~~~~----~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~- 158 (314)
T cd08216 87 EDLLKTHFPE----GLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQ- 158 (314)
T ss_pred HHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeeccccccc-
Confidence 9999865321 378899999999999999999999 99999999999999999999999999987654322110
Q ss_pred cccCCccccccccccccCccccCCC--CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchhhhccCC
Q 047768 871 VETPSSSIGVKGTIGYVAPEYGLGG--EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKVMEIVDP 948 (1009)
Q Consensus 871 ~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 948 (1009)
...........++..|+|||++... .++.++|||||||++|||++|+.||............ ........++.
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~-----~~~~~~~~~~~ 233 (314)
T cd08216 159 RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEK-----VRGTVPCLLDK 233 (314)
T ss_pred cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-----HhccCcccccc
Confidence 0011122335578899999998763 5789999999999999999999999753221111111 11111111110
Q ss_pred CCCC--------------hhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 949 SLLP--------------LEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 949 ~l~~--------------~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
.... .+................++.+++.+||+.||++|||++|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 234 STYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred CchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 0000 00000000111122233568899999999999999999999874
No 348
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-32 Score=301.61 Aligned_cols=203 Identities=27% Similarity=0.418 Sum_probs=179.7
Q ss_pred HHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccc--hHHHHHHHHHHHhcCCCCcceEEeeeeccccCCC
Q 047768 698 KATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGG--SKSFAAECEALRSIRHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 775 (1009)
.....|.+...||+|.|++|.+|.+..++..||||+++...-.. ...+.+|+++|+.++|||||+++.+... .
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t-----~ 127 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIET-----E 127 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeee-----c
Confidence 34567889999999999999999999999999999996543222 2348899999999999999999998543 4
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
...|+||||+.+|.+++|+.++.. +.+..+..++.|+.+|++|+|++ .|||||||++||+++.+.++||+|
T Consensus 128 ~~lylV~eya~~ge~~~yl~~~gr------~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaD 198 (596)
T KOG0586|consen 128 ATLYLVMEYASGGELFDYLVKHGR------MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIAD 198 (596)
T ss_pred ceeEEEEEeccCchhHHHHHhccc------chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeec
Confidence 789999999999999999998875 66688999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCCCCC-CCcccchHHHHHHHHHHhCCCCCccc
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEA-SMRGGVYSYGILLLEIFTRRRPTESM 923 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~elltg~~p~~~~ 923 (1009)
||++..+... ......+|++.|.|||++.+..| ++++|+||+|+++|-|+.|..||+..
T Consensus 199 fgfS~~~~~~---------~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~ 258 (596)
T KOG0586|consen 199 FGFSTFFDYG---------LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQ 258 (596)
T ss_pred cccceeeccc---------ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCc
Confidence 9999887643 34456889999999999999887 78999999999999999999999853
No 349
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=3.8e-32 Score=305.36 Aligned_cols=276 Identities=21% Similarity=0.283 Sum_probs=196.5
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccc---------
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSID--------- 771 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--------- 771 (1009)
.+|.+.+.||+|+||+||+|..+.+++.||+|++........+.+.+|++++++++||||+++++++....
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 57899999999999999999999899999999997665555677889999999999999999998755321
Q ss_pred cCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeC-CCCc
Q 047768 772 FKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLD-HDMV 850 (1009)
Q Consensus 772 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~-~~~~ 850 (1009)
..+....++|+||++ ++|.+++... .+++..++.++.|++.|+.|||+. +|+||||||+||+++ +++.
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~ 153 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQG-------PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLV 153 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCce
Confidence 111245789999996 5998888643 288999999999999999999999 999999999999997 4567
Q ss_pred eEEeccccccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCcc
Q 047768 851 AHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLT 929 (1009)
Q Consensus 851 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~ 929 (1009)
+|++|||.++....... .........|+..|+|||.+.+ ..++.++|||||||++|||++|+.||....... .
T Consensus 154 ~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~-~ 227 (342)
T cd07854 154 LKIGDFGLARIVDPHYS-----HKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELE-Q 227 (342)
T ss_pred EEECCcccceecCCccc-----cccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-H
Confidence 89999999986543211 0011122357889999997654 567889999999999999999999996432211 0
Q ss_pred HHHHHHHhccc----hhhhccC---CCCC-ChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 930 LHEFAKRALPE----KVMEIVD---PSLL-PLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 930 ~~~~~~~~~~~----~~~~~~d---~~l~-~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
....... .+. ....... .... .....+.... ........++.+++.+|++.||++|||+.|++.
T Consensus 228 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 228 MQLILES-VPVVREEDRNELLNVIPSFVRNDGGEPRRPLR-DLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred HHHHHHh-cCCCChHHhhhhhhhhhhhhhhcccccCCCHH-HHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 0111000 000 0000000 0000 0000000000 000012245779999999999999999999974
No 350
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.98 E-value=4.3e-32 Score=298.79 Aligned_cols=272 Identities=22% Similarity=0.282 Sum_probs=194.9
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
++|++.+.||+|++|+||+|.++.+++.||+|++..... ...+.+.+|++++++++||||+++++++.. ....
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-----EKRL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEec-----CCeE
Confidence 478889999999999999999988899999999864422 224578899999999999999999999754 3688
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCC-CCceEEeccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDH-DMVAHVSDFG 857 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~-~~~~kl~DfG 857 (1009)
++||||++ +++.+++..... ..+++..+..++.|++.||+|||++ +++||||+|+||+++. ++.+||+|||
T Consensus 77 ~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg 148 (294)
T PLN00009 77 YLVFEYLD-LDLKKHMDSSPD----FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFG 148 (294)
T ss_pred EEEEeccc-ccHHHHHHhCCC----CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccc
Confidence 99999995 588888765432 1367888889999999999999999 9999999999999985 5679999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHH
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKR 936 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 936 (1009)
++....... .......+++.|+|||++.+ ..++.++||||+||++|||+||+.||......+ ...+.. .
T Consensus 149 ~~~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~-~~~~~~-~ 218 (294)
T PLN00009 149 LARAFGIPV--------RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID-ELFKIF-R 218 (294)
T ss_pred cccccCCCc--------cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH-H
Confidence 997553211 11122456889999998766 457899999999999999999999997532211 011110 0
Q ss_pred hccchhhhccCCCC------CChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 937 ALPEKVMEIVDPSL------LPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 937 ~~~~~~~~~~d~~l------~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.........++... ...+..+.............++.+++.+|++.+|++||++.++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 219 ILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred HhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000011000000 000000000000001112345779999999999999999999986
No 351
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.98 E-value=1.2e-31 Score=292.38 Aligned_cols=245 Identities=24% Similarity=0.333 Sum_probs=190.3
Q ss_pred ccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEecc
Q 047768 709 IGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYEYM 785 (1009)
Q Consensus 709 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 785 (1009)
||+|+||+||+|....+|+.||+|++.... ......+..|++++++++||||+++++++.. .+..++||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFET-----KDDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEec-----CCeEEEEEecC
Confidence 689999999999998899999999986432 2224456789999999999999999988654 36789999999
Q ss_pred CCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccCCC
Q 047768 786 QNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSAS 865 (1009)
Q Consensus 786 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 865 (1009)
++++|.+++..... ..+++.++..++.|++.|+.|||+. +++||||+|+||++++++.+|++|||.+......
T Consensus 76 ~~~~L~~~l~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~ 148 (277)
T cd05577 76 NGGDLKYHIYNVGE----PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG 148 (277)
T ss_pred CCCcHHHHHHHcCc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC
Confidence 99999999976542 2489999999999999999999999 9999999999999999999999999998765431
Q ss_pred CCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchhhhc
Q 047768 866 PLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKVMEI 945 (1009)
Q Consensus 866 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 945 (1009)
.......++..|+|||++.+..++.++||||+||++|+|++|+.||...... ........... ..
T Consensus 149 ---------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~-~~---- 213 (277)
T cd05577 149 ---------KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEK-VEKEELKRRTL-EM---- 213 (277)
T ss_pred ---------CccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccc-ccHHHHHhccc-cc----
Confidence 1112345788999999998888999999999999999999999998643221 01111111000 00
Q ss_pred cCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 047768 946 VDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRM-----EMTDVVV 995 (1009)
Q Consensus 946 ~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rp-----t~~evl~ 995 (1009)
... ........+.+++.+|++.+|++|| ++.+++.
T Consensus 214 ----~~~-----------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 214 ----AVE-----------YPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred ----ccc-----------CCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 000 0011234577999999999999999 6666654
No 352
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.98 E-value=1.4e-31 Score=288.67 Aligned_cols=252 Identities=25% Similarity=0.392 Sum_probs=202.3
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
+|.+.+.||+|+||.||+|.+..++..||+|++..... ...+.+.+|++++++++|||++++.+.+.. ....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~-----~~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEE-----KGKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEec-----CCEEE
Confidence 47788999999999999999988899999999975533 345678899999999999999999998654 27789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+|+||+++++|.+++...... ...+++.++..++.+++.|+.|||+. +++|+||+|+||+++.++.++|+|||.+
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~ 150 (258)
T cd08215 76 IVMEYADGGDLSQKIKKQKKE--GKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGIS 150 (258)
T ss_pred EEEEecCCCcHHHHHHHhhcc--CCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccce
Confidence 999999999999999875311 12489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhcc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
....... .......|++.|+|||...+..++.++||||+|+++|+|++|+.||.... ..........
T Consensus 151 ~~~~~~~--------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~~ 217 (258)
T cd08215 151 KVLSSTV--------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN-----LLELALKILK 217 (258)
T ss_pred eecccCc--------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc-----HHHHHHHHhc
Confidence 8654321 11123467889999999999899999999999999999999999986432 1122111111
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
. .....+ ..+...+.+++.+|+..+|++|||+.|+++
T Consensus 218 ~--------~~~~~~-----------~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 218 G--------QYPPIP-----------SQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred C--------CCCCCC-----------CCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1 111111 123346789999999999999999999975
No 353
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.98 E-value=1.6e-31 Score=287.52 Aligned_cols=248 Identities=27% Similarity=0.409 Sum_probs=200.3
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
+|++.+.||+|++|.||+|....+++.||+|.+..... ...+.+.+|++++++++|+|++++++++... ...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETS-----DSLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeC-----CEEE
Confidence 47788999999999999999988899999999965543 2346789999999999999999999986543 6789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+|+||+++++|.+++.... .+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.++|+|||.+
T Consensus 76 ~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 146 (254)
T cd06627 76 IILEYAENGSLRQIIKKFG------PFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVA 146 (254)
T ss_pred EEEecCCCCcHHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccc
Confidence 9999999999999998763 389999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhcc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
........ ......++..|+|||...+..++.++||||+|+++|+|++|+.||..... ..... ....
T Consensus 147 ~~~~~~~~--------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~----~~~~~-~~~~ 213 (254)
T cd06627 147 TKLNDVSK--------DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP----MAALF-RIVQ 213 (254)
T ss_pred eecCCCcc--------cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH----HHHHH-HHhc
Confidence 87654321 12234678899999998888889999999999999999999999864321 11111 0000
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.... . ........+.+++.+|+..+|++||++.|++.
T Consensus 214 ~~~~--------~-----------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 214 DDHP--------P-----------LPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred cCCC--------C-----------CCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 0000 0 00122345779999999999999999999874
No 354
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.98 E-value=1.3e-31 Score=297.69 Aligned_cols=283 Identities=21% Similarity=0.280 Sum_probs=199.5
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc--chHHHHHHHHHHHhcCCCCcceEEeeeecccc---CC
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG--GSKSFAAECEALRSIRHRNLIKIVTICSSIDF---KG 774 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---~~ 774 (1009)
.++|++.+.||+|+||.||+|+++.+++.||||++...... ....+.+|++++++++||||+++++++..... ..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 46899999999999999999999989999999998644322 23467889999999999999999987654321 22
Q ss_pred CceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEe
Q 047768 775 VDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 854 (1009)
Q Consensus 775 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~ 854 (1009)
....++|+||+. +++.+.+..... .+++.++..++.|+++||+|||++ +|+||||||+||++++++.+|++
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~~~~-----~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~ 157 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLENPSV-----KLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIA 157 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhcccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEC
Confidence 346799999996 478777765432 389999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCCCCccc---cCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccH
Q 047768 855 DFGLAKFLSASPLGNVVE---TPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTL 930 (1009)
Q Consensus 855 DfGla~~~~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~ 930 (1009)
|||+++............ .........|++.|+|||++.+. .++.++|||||||++|||++|+.||....... ..
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~-~~ 236 (311)
T cd07866 158 DFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDID-QL 236 (311)
T ss_pred cCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHH-HH
Confidence 999998665432111100 11122335678899999987654 57899999999999999999999986432210 11
Q ss_pred HHHHHHh--ccch-------hhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 931 HEFAKRA--LPEK-------VMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 931 ~~~~~~~--~~~~-------~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
....... .++. +....+......... .... ........+.+++.+|++.||++|||+.|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 237 HLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPR-TLEE--RFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHHHHhCCCChhhchhhhhcccccccccCCCCCc-cHHH--HcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 1111100 0000 000000000000000 0000 00112256789999999999999999999874
No 355
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.98 E-value=7.2e-32 Score=295.34 Aligned_cols=270 Identities=23% Similarity=0.312 Sum_probs=199.7
Q ss_pred CccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc--chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEE
Q 047768 703 FSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG--GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
|.+.+.||+|++|.||+|....+++.+|+|+++..... ....+.+|++++++++|+||+++++++.. ....++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRH-----KGDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhcc-----CCCEEE
Confidence 56778999999999999999888999999998654322 34678889999999999999999998654 377899
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
|+||+++ ++.+++..... .+++.++..++.+++.|+.|||+. +|+|+||+|+||+++.++.+||+|||.+.
T Consensus 76 v~e~~~~-~l~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~ 146 (283)
T cd05118 76 VFEFMDT-DLYKLIKDRQR-----GLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLAR 146 (283)
T ss_pred EEeccCC-CHHHHHHhhcc-----cCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeE
Confidence 9999964 89888877542 389999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh--
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA-- 937 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~-- 937 (1009)
...... .......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||......+ .........
T Consensus 147 ~~~~~~--------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~-~~~~~~~~~~~ 217 (283)
T cd05118 147 SFGSPV--------RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID-QLFKIFRTLGT 217 (283)
T ss_pred ecCCCc--------ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcCC
Confidence 665432 011124578899999998776 78999999999999999999999986432211 111111110
Q ss_pred -ccchhhhccC---CCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 938 -LPEKVMEIVD---PSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 938 -~~~~~~~~~d---~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.+.....+.+ ......+................++.+++.+|++.||.+||++.|++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 218 PDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred CchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0000111110 000000100000001111234567889999999999999999999975
No 356
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.98 E-value=1.1e-31 Score=290.19 Aligned_cols=242 Identities=26% Similarity=0.319 Sum_probs=192.6
Q ss_pred ccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEecc
Q 047768 709 IGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYEYM 785 (1009)
Q Consensus 709 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 785 (1009)
||.|+||.||+|.+..+++.||+|++..... ...+.+.+|++++++++||||+++++++.. ....++|+||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKD-----KKYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEc-----CCccEEEEecC
Confidence 6999999999999988899999999864332 234678999999999999999999998654 36789999999
Q ss_pred CCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccCCC
Q 047768 786 QNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSAS 865 (1009)
Q Consensus 786 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 865 (1009)
++++|.+++.+... +++..+..++.|++.|++|||+. +++|+||+|+||+++.++.+|++|||.++.....
T Consensus 76 ~~~~L~~~l~~~~~------l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 76 LGGELWTILRDRGL------FDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG 146 (262)
T ss_pred CCCcHHHHHhhcCC------CCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCcc
Confidence 99999999987542 88999999999999999999998 9999999999999999999999999999866432
Q ss_pred CCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchhhhc
Q 047768 866 PLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKVMEI 945 (1009)
Q Consensus 866 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 945 (1009)
. ......|+..|+|||.+.+..++.++|+||+|+++|||++|+.||.....+ ..+.... +
T Consensus 147 ~---------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~--------~ 206 (262)
T cd05572 147 Q---------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDED---PMEIYND--------I 206 (262)
T ss_pred c---------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC---HHHHHHH--------H
Confidence 1 112245788999999998888999999999999999999999999754321 1111111 1
Q ss_pred cC-CCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 047768 946 VD-PSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRME-----MTDVVV 995 (1009)
Q Consensus 946 ~d-~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt-----~~evl~ 995 (1009)
.+ ......+ ......+.+++.+||+.+|++||+ ++|+++
T Consensus 207 ~~~~~~~~~~-----------~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 207 LKGNGKLEFP-----------NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred hccCCCCCCC-----------cccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 10 0000000 112346889999999999999999 666654
No 357
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.98 E-value=1.3e-31 Score=301.16 Aligned_cols=277 Identities=19% Similarity=0.251 Sum_probs=201.3
Q ss_pred HHHHHHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeeccc
Q 047768 694 KELSKATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSID 771 (1009)
Q Consensus 694 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 771 (1009)
.++....++|.+.+.||+|+||.||+|....+++.||+|+++.... ...+.+.+|++++++++||||+++++++....
T Consensus 10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~ 89 (345)
T cd07877 10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR 89 (345)
T ss_pred HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence 4455677899999999999999999999988999999999864321 22456788999999999999999999875432
Q ss_pred -cCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCc
Q 047768 772 -FKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMV 850 (1009)
Q Consensus 772 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~ 850 (1009)
+......+++++++ +++|.+++.... +++..+..++.|+++|++|||+. +|+||||||+||++++++.
T Consensus 90 ~~~~~~~~~lv~~~~-~~~L~~~~~~~~-------l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~ 158 (345)
T cd07877 90 SLEEFNDVYLVTHLM-GADLNNIVKCQK-------LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE 158 (345)
T ss_pred cccccccEEEEehhc-ccCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCC
Confidence 12234567888877 789998886532 88999999999999999999999 9999999999999999999
Q ss_pred eEEeccccccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCcc
Q 047768 851 AHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLT 929 (1009)
Q Consensus 851 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~ 929 (1009)
+||+|||+++.... ......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ..
T Consensus 159 ~kl~dfg~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~ 226 (345)
T cd07877 159 LKILDFGLARHTDD-----------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQ 226 (345)
T ss_pred EEEecccccccccc-----------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HH
Confidence 99999999875432 1123467889999998766 56789999999999999999999998643211 11
Q ss_pred HHHHHHHh--ccchhhhccCCC--------CCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 930 LHEFAKRA--LPEKVMEIVDPS--------LLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 930 ~~~~~~~~--~~~~~~~~~d~~--------l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
........ .+.....-+... +...+..+. .........++.+++.+|++.||.+||++.|+++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 227 LKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNF---ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcch---hhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 11111100 001111000000 000000000 00000123457899999999999999999998764
No 358
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.98 E-value=6.7e-32 Score=292.41 Aligned_cols=253 Identities=24% Similarity=0.308 Sum_probs=194.4
Q ss_pred ccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEecc
Q 047768 709 IGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYEYM 785 (1009)
Q Consensus 709 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 785 (1009)
||+|+||.||+|++..+|+.||+|++..... ...+.+.+|++++++++|||++++++.+.. ....++|+||+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQG-----KKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheec-----CcEEEEEEecC
Confidence 6899999999999988899999999864432 234678899999999999999999887543 47789999999
Q ss_pred CCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccCCC
Q 047768 786 QNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSAS 865 (1009)
Q Consensus 786 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 865 (1009)
++++|.+++.... .+++..+..++.|+++||+|||+. +++||||+|+||++++++.+|++|||++......
T Consensus 76 ~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~ 146 (265)
T cd05579 76 PGGDLASLLENVG------SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVR 146 (265)
T ss_pred CCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccC
Confidence 9999999998654 389999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchhhhc
Q 047768 866 PLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKVMEI 945 (1009)
Q Consensus 866 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 945 (1009)
................++..|+|||......++.++||||||+++||+++|+.||..... .......
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~-------- 213 (265)
T cd05579 147 RQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP-----EEIFQNI-------- 213 (265)
T ss_pred cccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHH--------
Confidence 110000001122235578899999999888899999999999999999999999864321 1111111
Q ss_pred cCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 047768 946 VDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLC 998 (1009)
Q Consensus 946 ~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~ 998 (1009)
...... .+. .......+.+++.+|++.+|++|||+.++.+.++
T Consensus 214 ~~~~~~-~~~---------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 214 LNGKIE-WPE---------DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred hcCCcC-CCc---------cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 000000 000 0002356789999999999999999966665554
No 359
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.98 E-value=7.7e-32 Score=300.64 Aligned_cols=271 Identities=23% Similarity=0.296 Sum_probs=198.3
Q ss_pred HHHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc--ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCC
Q 047768 697 SKATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ--KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKG 774 (1009)
Q Consensus 697 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 774 (1009)
...+++|++.+.||+|+||.||+|..+.+++.||||++.... ....+.+.+|++++++++|||++++.+++...
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~---- 81 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP---- 81 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC----
Confidence 446778999999999999999999999899999999885432 22346788999999999999999999986432
Q ss_pred CceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEe
Q 047768 775 VDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 854 (1009)
Q Consensus 775 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~ 854 (1009)
....++|+||+ +++|.++++... +++.....++.|+++|++|||+. +|+||||+|+||++++++.+|++
T Consensus 82 ~~~~~lv~e~~-~~~L~~~~~~~~-------~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~ 150 (328)
T cd07856 82 LEDIYFVTELL-GTDLHRLLTSRP-------LEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKIC 150 (328)
T ss_pred CCcEEEEeehh-ccCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeC
Confidence 24678999998 569998887532 77888889999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHH
Q 047768 855 DFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEF 933 (1009)
Q Consensus 855 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~ 933 (1009)
|||.++..... .....++..|+|||++.+ ..++.++||||||+++|||++|+.||...... .....
T Consensus 151 dfg~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~--~~~~~ 217 (328)
T cd07856 151 DFGLARIQDPQ-----------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHV--NQFSI 217 (328)
T ss_pred ccccccccCCC-----------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence 99998754321 123457889999998766 56899999999999999999999999643211 00000
Q ss_pred HHHh---ccchhh-hccCCCCCChhhhhhhcccc-----ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 934 AKRA---LPEKVM-EIVDPSLLPLEEERTNSRRV-----RNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 934 ~~~~---~~~~~~-~~~d~~l~~~~~~r~~~~~~-----~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
.... .++++. .+.+......... ...... .......++.+++.+|++.+|++||+++|++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 218 ITDLLGTPPDDVINTICSENTLRFVQS-LPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHHHhCCCCHHHHHhccchhhHHHHhh-ccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 111111 1111000000000 000000 000123568899999999999999999999764
No 360
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.98 E-value=9.2e-32 Score=296.32 Aligned_cols=254 Identities=22% Similarity=0.292 Sum_probs=192.7
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc-cchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCCCce
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-GGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
.++|++.+.||+|+||+||+|.++.+++.||||+++.... .....+.+|+.++.+. .||||+++++++... ..
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~-----~~ 88 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITD-----SD 88 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecC-----Ce
Confidence 4578889999999999999999988899999999964432 2234566777777766 499999999997653 67
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++||||+. +++.+++..... .+++..+..++.|++.|++|||+.. +|+||||+|+||++++++.+||+|||
T Consensus 89 ~~~v~e~~~-~~l~~l~~~~~~-----~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg 160 (296)
T cd06618 89 VFICMELMS-TCLDKLLKRIQG-----PIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFG 160 (296)
T ss_pred EEEEeeccC-cCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccc
Confidence 899999984 578777765432 4899999999999999999999732 89999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCCCC----CCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHH
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGE----ASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEF 933 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~ 933 (1009)
++....... ......++..|+|||++.+.. ++.++||||||+++|||++|+.||...... .+.
T Consensus 161 ~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~ 227 (296)
T cd06618 161 ISGRLVDSK---------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE----FEV 227 (296)
T ss_pred cchhccCCC---------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH----HHH
Confidence 987654321 111234788999999987654 789999999999999999999998642211 111
Q ss_pred HHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 934 AKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 934 ~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
.... .+......+. ...+..++.+++.+|++.||++||++.++++.
T Consensus 228 ~~~~--------~~~~~~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 228 LTKI--------LQEEPPSLPP---------NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred HHHH--------hcCCCCCCCC---------CCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1111 1110000000 00233467899999999999999999999765
No 361
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.98 E-value=2.7e-31 Score=286.59 Aligned_cols=254 Identities=26% Similarity=0.357 Sum_probs=202.8
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
+|...+.||+|++|.||+|....+++.|++|+++.... ...+.+.+|++++++++|+||+++++++.... ....+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~ 77 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE---KNTLN 77 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC---CCeEE
Confidence 46778999999999999999988899999999865542 33578899999999999999999999865421 25789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+|+||+++++|.+++.... .+++.+++.++.+++.|++|||+. +++|+||+|+||+++.++.++|+|||.+
T Consensus 78 lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~ 148 (260)
T cd06606 78 IFLEYVSGGSLSSLLKKFG------KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCA 148 (260)
T ss_pred EEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccE
Confidence 9999999999999998764 389999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhcc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
......... .......++..|+|||...+..++.++||||||+++|+|++|+.||..... ......
T Consensus 149 ~~~~~~~~~------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~---- 214 (260)
T cd06606 149 KRLGDIETG------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN----PMAALY---- 214 (260)
T ss_pred Eeccccccc------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc----hHHHHH----
Confidence 876553210 012235678899999999888899999999999999999999999875331 111111
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.+....... ..+......+.+++.+|++.+|++||++.|++.
T Consensus 215 ----~~~~~~~~~----------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 215 ----KIGSSGEPP----------EIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred ----hccccCCCc----------CCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 111000000 011122456889999999999999999999975
No 362
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.98 E-value=1.6e-31 Score=300.29 Aligned_cols=279 Identities=21% Similarity=0.239 Sum_probs=197.7
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc--ccchHHHHHHHHHHHhcCCCCcceEEeeeeccc-cCCCc
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ--KGGSKSFAAECEALRSIRHRNLIKIVTICSSID-FKGVD 776 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~ 776 (1009)
.++|.+.+.||+|+||.||+|++..+|+.||||+++... ......+.+|++++++++||||+++++++.... .....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 368999999999999999999998889999999986432 222356789999999999999999999875432 12234
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
..++|+||+. .++.++... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++||
T Consensus 94 ~~~lv~e~~~-~~l~~~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~df 161 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMGH--------PLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDF 161 (342)
T ss_pred eEEEEecccc-cCHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeC
Confidence 5689999995 477766531 288999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 935 (1009)
|+++.... ......++..|+|||++.+ ..++.++|||||||++|||++|+.||....... .......
T Consensus 162 g~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~-~~~~~~~ 229 (342)
T cd07879 162 GLARHADA-----------EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILK 229 (342)
T ss_pred CCCcCCCC-----------CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH
Confidence 99875432 1123467889999999876 468899999999999999999999997422110 0111110
Q ss_pred Hh-c-cchhhhccCCCC-CChhhhhhhccc----cccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHHHHH
Q 047768 936 RA-L-PEKVMEIVDPSL-LPLEEERTNSRR----VRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK--LCHARQ 1002 (1009)
Q Consensus 936 ~~-~-~~~~~~~~d~~l-~~~~~~r~~~~~----~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~--L~~i~~ 1002 (1009)
.. . .....+...... .......+.... .........+.+++.+|++.||++||+++|++.. ++..++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 230 VTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred hcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 00 0 000111110000 000000000000 0000123457799999999999999999999854 555543
No 363
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.98 E-value=1.5e-31 Score=296.19 Aligned_cols=248 Identities=26% Similarity=0.326 Sum_probs=193.1
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
+.|+..+.||+|+||.||+|+++.++..||+|.+..... ...+.+.+|+++++.++|+|++++.+++... ..
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 89 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE-----HT 89 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcC-----Ce
Confidence 347777889999999999999988899999999864322 2234677899999999999999999987643 67
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.++|+||+. |++.+++..... .+++.++..++.+++.|+.|||+. +++||||+|+||+++.++.+|++|||
T Consensus 90 ~~lv~e~~~-~~l~~~~~~~~~-----~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg 160 (308)
T cd06634 90 AWLVMEYCL-GSASDLLEVHKK-----PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFG 160 (308)
T ss_pred eEEEEEccC-CCHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcc
Confidence 899999996 688888765443 388999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccC---CCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHH
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGL---GGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFA 934 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 934 (1009)
++...... ....|+..|+|||++. ...++.++|||||||++|||++|+.||....... ....+.
T Consensus 161 ~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~ 227 (308)
T cd06634 161 SASIMAPA------------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIA 227 (308)
T ss_pred cceeecCc------------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH-HHHHHh
Confidence 98765321 1245788999999874 3567889999999999999999999986431110 000000
Q ss_pred HHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 047768 935 KRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKL 997 (1009)
Q Consensus 935 ~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L 997 (1009)
. ..... .....+...+.+++.+||+.+|++||++.+++..-
T Consensus 228 ~------------~~~~~----------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 228 Q------------NESPA----------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred h------------cCCCC----------cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 0 00000 00112334578999999999999999999998653
No 364
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.98 E-value=3.3e-31 Score=288.85 Aligned_cols=242 Identities=23% Similarity=0.281 Sum_probs=183.8
Q ss_pred cccccCCceEEEEEEecCCeEEEEEEeeccccc---chHHHHHHHHH---HHhcCCCCcceEEeeeeccccCCCceEEEE
Q 047768 708 TIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG---GSKSFAAECEA---LRSIRHRNLIKIVTICSSIDFKGVDFKALV 781 (1009)
Q Consensus 708 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~---l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 781 (1009)
.||+|+||.||+|....+++.||+|.+...... ....+..|..+ ++...||+|+++.+++.. .+..++|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-----PDKLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeec-----CCEEEEE
Confidence 489999999999999888999999998643211 12233444433 444579999999987654 3678999
Q ss_pred EeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccc
Q 047768 782 YEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 861 (1009)
Q Consensus 782 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~ 861 (1009)
|||+.+|+|.+++.... .+++.++..++.|+++|+.|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 76 ~e~~~g~~L~~~l~~~~------~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~ 146 (278)
T cd05606 76 LDLMNGGDLHYHLSQHG------VFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 146 (278)
T ss_pred EecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccc
Confidence 99999999999887643 389999999999999999999998 999999999999999999999999999875
Q ss_pred cCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccc
Q 047768 862 LSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPE 940 (1009)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 940 (1009)
.... ......|+..|+|||++.++ .++.++||||+||++|||++|+.||....... .........
T Consensus 147 ~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~--~~~~~~~~~-- 212 (278)
T cd05606 147 FSKK----------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEIDRMTL-- 212 (278)
T ss_pred cCcc----------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccc--hHHHHHHhh--
Confidence 5321 11234689999999998754 68999999999999999999999997532211 111110000
Q ss_pred hhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 047768 941 KVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRM-----EMTDVVV 995 (1009)
Q Consensus 941 ~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rp-----t~~evl~ 995 (1009)
..+..+ ......++.+++.+|+..+|.+|| ++.|+++
T Consensus 213 ----~~~~~~--------------~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 213 ----TMAVEL--------------PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred ----ccCCCC--------------CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 000000 011234578999999999999999 9999975
No 365
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.98 E-value=1.8e-31 Score=287.58 Aligned_cols=250 Identities=23% Similarity=0.289 Sum_probs=200.3
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc--ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ--KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
+|++.+.||+|+||.||+|+++.+++.+|+|.+.... ......+.+|++++++++|+||+++.+++.. ....+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLD-----GNKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhcc-----CCEEE
Confidence 4778899999999999999998899999999986543 2234567889999999999999999988543 37789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+|+||+++++|.+++...... ...+++..++.++.+++.|++|||+. +++||||+|+||++++++.+|++|||++
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~ 150 (256)
T cd08530 76 IVMEYAPFGDLSKAISKRKKK--RKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGIS 150 (256)
T ss_pred EEehhcCCCCHHHHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccch
Confidence 999999999999998763321 12488999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhcc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
+..... ......++..|+|||...+..++.++|+||+|+++|||++|+.||..... .+.......
T Consensus 151 ~~~~~~----------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~ 215 (256)
T cd08530 151 KVLKKN----------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM-----QDLRYKVQR 215 (256)
T ss_pred hhhccC----------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHhc
Confidence 876542 11123578899999999999999999999999999999999999864321 111111100
Q ss_pred chhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 940 EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 940 ~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.... .....+..++.+++.+|++.+|++||++.|+++
T Consensus 216 --------~~~~-----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 216 --------GKYP-----------PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred --------CCCC-----------CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000 011134456889999999999999999999975
No 366
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.98 E-value=6.4e-32 Score=302.67 Aligned_cols=285 Identities=21% Similarity=0.234 Sum_probs=206.7
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc--ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ--KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
+|.+.+.||+|+||.||+|+...+++.||||++.... ....+.+.+|++++++++|+||+++.+++...........+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5788899999999999999998889999999986543 33456789999999999999999999987654323334689
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+||||++ ++|.+++.... .+++..++.++.+++.|++|||+. +|+||||||+||+++.++.++|+|||++
T Consensus 81 lv~e~~~-~~l~~~l~~~~------~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~ 150 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ------PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLA 150 (330)
T ss_pred EEecchh-hhHHHHHhCCC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCce
Confidence 9999997 58999887654 389999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh-
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA- 937 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~- 937 (1009)
......... ........++..|+|||++.+. .++.++||||+|+++|+|++|+.||....... .........
T Consensus 151 ~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~ 224 (330)
T cd07834 151 RGVDPDEDE-----KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYID-QLNLIVEVLG 224 (330)
T ss_pred Eeecccccc-----cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHhcC
Confidence 876543210 0112234578899999999888 78999999999999999999999997543210 001110000
Q ss_pred -ccch-hhhccCCCCCChhhh----hhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHHHHH
Q 047768 938 -LPEK-VMEIVDPSLLPLEEE----RTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK--LCHARQ 1002 (1009)
Q Consensus 938 -~~~~-~~~~~d~~l~~~~~~----r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~--L~~i~~ 1002 (1009)
.+.. ............... ...............+.+++.+||+.+|++||++.++++. ++.+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 225 TPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred CCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 0000 000000000000000 0000000011134567899999999999999999999874 554443
No 367
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.1e-33 Score=273.97 Aligned_cols=282 Identities=22% Similarity=0.349 Sum_probs=203.8
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeec--ccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCC---C
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINL--EQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKG---V 775 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~---~ 775 (1009)
+.|....++|+|.||+||+|+.+.+|+.||+|++-. +..+-.....+|++++..++|+|++.++..|...+... .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 345566889999999999999999999999987633 23344567788999999999999999999987643222 3
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
...++|+.+|++ +|.-.+...... ++..++.+++.++..||.|+|.. .|+|||+||+|+||+.+|.+||+|
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~~vr-----~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklAD 167 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNRKVR-----FSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLAD 167 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCcccc-----ccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeec
Confidence 357899999976 899998876543 88999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHH
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFA 934 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 934 (1009)
||+|+.+..+.. ......+..+-|..|++||.+.+ ..|+++.|||..||++.||+||.+-+..... ...+..+.
T Consensus 168 FGlar~fs~~~n----~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnte-qqql~~Is 242 (376)
T KOG0669|consen 168 FGLARAFSTSKN----VVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTE-QQQLHLIS 242 (376)
T ss_pred cccccceecccc----cCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChH-HHHHHHHH
Confidence 999987765432 11223345667999999998776 5789999999999999999999876653221 11111111
Q ss_pred H---H----hccc----hhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 935 K---R----ALPE----KVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 935 ~---~----~~~~----~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
. . ..|+ ++++-++..-.+....|.......+.---.+.++++...+..||.+|+++++++..
T Consensus 243 ~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 243 QLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred HHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 1 0 0111 01111111101111111111111111111256789999999999999999998754
No 368
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=9.5e-33 Score=276.51 Aligned_cols=203 Identities=27% Similarity=0.323 Sum_probs=176.1
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccch---HHHHHHHHHHHhcCCCCcceEEeeeeccccCCCc
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGS---KSFAAECEALRSIRHRNLIKIVTICSSIDFKGVD 776 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 776 (1009)
.++|...+.||+|.||.|..++.+.+|+.+|+|+++.+..-.. ..-..|-++++..+||.+..+-- .|+..+
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKY-----sFQt~d 241 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKY-----SFQTQD 241 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhh-----hhccCc
Confidence 4678889999999999999999999999999999976643332 34456889999999999877643 356668
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
..|.||||..||.|.-.+.+.+. +++.....+..+|..||.|||++ +||.||+|.+|.++|.+|++||+||
T Consensus 242 rlCFVMeyanGGeLf~HLsrer~------FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDF 312 (516)
T KOG0690|consen 242 RLCFVMEYANGGELFFHLSRERV------FSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDF 312 (516)
T ss_pred eEEEEEEEccCceEeeehhhhhc------ccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeec
Confidence 99999999999999888876543 88888899999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccc
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMF 924 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~ 924 (1009)
|+++.-- ........++||+.|.|||++.+..|+.+.|-|.+|||+|||+.|+.||....
T Consensus 313 GLCKE~I--------~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~d 372 (516)
T KOG0690|consen 313 GLCKEEI--------KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKD 372 (516)
T ss_pred ccchhcc--------cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccc
Confidence 9998432 22345567999999999999999999999999999999999999999997543
No 369
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.97 E-value=1.7e-31 Score=299.71 Aligned_cols=279 Identities=18% Similarity=0.289 Sum_probs=195.5
Q ss_pred ccCc-cCCcccccCCceEEEEEEecCCeEEEEEEeecccccc--------------hHHHHHHHHHHHhcCCCCcceEEe
Q 047768 701 NEFS-SSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGG--------------SKSFAAECEALRSIRHRNLIKIVT 765 (1009)
Q Consensus 701 ~~~~-~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~l~~ 765 (1009)
++|. +.+.||+|+||+||+|.++.+++.||||+++...... ...+.+|++++++++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 3554 4577999999999999998889999999986432211 125778999999999999999999
Q ss_pred eeeccccCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceee
Q 047768 766 ICSSIDFKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLL 845 (1009)
Q Consensus 766 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill 845 (1009)
++... ...++||||+. |+|.+++.... .+++.....++.|++.|+.|||+. +|+||||+|+||++
T Consensus 88 ~~~~~-----~~~~lv~e~~~-~~l~~~l~~~~------~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill 152 (335)
T PTZ00024 88 VYVEG-----DFINLVMDIMA-SDLKKVVDRKI------RLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFI 152 (335)
T ss_pred EEecC-----CcEEEEEeccc-cCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEE
Confidence 87543 67899999996 69999987644 388999999999999999999998 99999999999999
Q ss_pred CCCCceEEeccccccccCCCCCCCcc------ccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCC
Q 047768 846 DHDMVAHVSDFGLAKFLSASPLGNVV------ETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRR 918 (1009)
Q Consensus 846 ~~~~~~kl~DfGla~~~~~~~~~~~~------~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~ 918 (1009)
+.++.+|++|||+++........... ..........++..|+|||.+.+. .++.++||||+||++|||++|+.
T Consensus 153 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~ 232 (335)
T PTZ00024 153 NSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKP 232 (335)
T ss_pred CCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999876522111000 001112234568899999998764 46899999999999999999999
Q ss_pred CCcccccCCccHHHHHHHhc---cchhhhccC-CCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 047768 919 PTESMFNEGLTLHEFAKRAL---PEKVMEIVD-PSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVV 994 (1009)
Q Consensus 919 p~~~~~~~~~~~~~~~~~~~---~~~~~~~~d-~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl 994 (1009)
||....... .+........ ...+.+..+ +.........+.........+..++.+++.+|++.+|++||+++|++
T Consensus 233 p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l 311 (335)
T PTZ00024 233 LFPGENEID-QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEAL 311 (335)
T ss_pred CCCCCCHHH-HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHh
Confidence 987433211 1111111000 000000000 00000000000000000012235678999999999999999999998
Q ss_pred H
Q 047768 995 V 995 (1009)
Q Consensus 995 ~ 995 (1009)
.
T Consensus 312 ~ 312 (335)
T PTZ00024 312 K 312 (335)
T ss_pred c
Confidence 5
No 370
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=6.1e-32 Score=316.93 Aligned_cols=278 Identities=19% Similarity=0.223 Sum_probs=186.8
Q ss_pred hccCccCCcccccCCceEEEEEEecCC-eEEEEEEee--------------c---ccccchHHHHHHHHHHHhcCCCCcc
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENG-MLVAVKVIN--------------L---EQKGGSKSFAAECEALRSIRHRNLI 761 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~-~~vavK~~~--------------~---~~~~~~~~~~~E~~~l~~l~h~niv 761 (1009)
.++|.+.+.||+|+||+||+|..+... ..+++|.+. . ........+.+|++++++++||||+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 468999999999999999999875322 222222110 0 0111234678999999999999999
Q ss_pred eEEeeeeccccCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCC
Q 047768 762 KIVTICSSIDFKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPS 841 (1009)
Q Consensus 762 ~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~ 841 (1009)
++++++... +..++|+|++ .+++.+++........ ......++..++.|++.||.|||++ +||||||||+
T Consensus 227 ~l~~~~~~~-----~~~~lv~e~~-~~~l~~~l~~~~~~~~-~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~ 296 (501)
T PHA03210 227 KIEEILRSE-----ANTYMITQKY-DFDLYSFMYDEAFDWK-DRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLE 296 (501)
T ss_pred cEeEEEEEC-----CeeEEEEecc-ccCHHHHHhhcccccc-ccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHH
Confidence 999997643 6778999998 4688888765332111 1234566788999999999999999 9999999999
Q ss_pred ceeeCCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCC-C
Q 047768 842 NVLLDHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRP-T 920 (1009)
Q Consensus 842 Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p-~ 920 (1009)
|||++.++.+||+|||+++.+..... .......||..|+|||++.+..++.++|||||||++|||++|+.+ +
T Consensus 297 NILl~~~~~vkL~DFGla~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~ 369 (501)
T PHA03210 297 NIFLNCDGKIVLGDFGTAMPFEKERE-------AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPI 369 (501)
T ss_pred HEEECCCCCEEEEeCCCceecCcccc-------cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCc
Confidence 99999999999999999987643211 122346799999999999999999999999999999999998754 4
Q ss_pred cccccC-CccHHHHHHH------hccch---hhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCH
Q 047768 921 ESMFNE-GLTLHEFAKR------ALPEK---VMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEM 990 (1009)
Q Consensus 921 ~~~~~~-~~~~~~~~~~------~~~~~---~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~ 990 (1009)
...... ...+.+.... .++.. +.+.++......... ..............+.+++.+|++.||++|||+
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa 448 (501)
T PHA03210 370 GDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGH-SVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGA 448 (501)
T ss_pred cCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCcc-chhhHHHhcCCChHHHHHHHHHhccCcccCcCH
Confidence 322111 1111111110 01111 111111100000000 000000000122346677889999999999999
Q ss_pred HHHHH
Q 047768 991 TDVVV 995 (1009)
Q Consensus 991 ~evl~ 995 (1009)
.|++.
T Consensus 449 ~elL~ 453 (501)
T PHA03210 449 AELLA 453 (501)
T ss_pred HHHhh
Confidence 99986
No 371
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=3.8e-31 Score=293.53 Aligned_cols=245 Identities=26% Similarity=0.334 Sum_probs=191.4
Q ss_pred CccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc---chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 703 FSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG---GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
|...+.||+|+||+||+|+...+++.||+|++...... ....+.+|++++++++|||++++++++... ...+
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 97 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKE-----HTAW 97 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeC-----CEEE
Confidence 55567899999999999999889999999998644322 234678899999999999999999997653 6789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+||||+. |++.+++..... .+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.+||+|||++
T Consensus 98 lv~e~~~-~~l~~~l~~~~~-----~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~ 168 (313)
T cd06633 98 LVMEYCL-GSASDLLEVHKK-----PLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSA 168 (313)
T ss_pred EEEecCC-CCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCC
Confidence 9999995 688888866443 388999999999999999999999 9999999999999999999999999988
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccC---CCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHH
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGL---GGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKR 936 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 936 (1009)
..... .....|+..|+|||++. ...++.++|||||||++|||++|..||..... ......
T Consensus 169 ~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~-----~~~~~~ 231 (313)
T cd06633 169 SKSSP------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSALYH 231 (313)
T ss_pred cccCC------------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHH
Confidence 64321 11346788999999974 46688999999999999999999999864321 111111
Q ss_pred hccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 937 ALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 937 ~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
...... +.. ....+...+.+++.+|++.+|.+||++.+++..
T Consensus 232 ~~~~~~-----~~~-------------~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 232 IAQNDS-----PTL-------------QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred HHhcCC-----CCC-------------CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 000 001223457789999999999999999999864
No 372
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=2.7e-31 Score=297.48 Aligned_cols=275 Identities=20% Similarity=0.237 Sum_probs=195.5
Q ss_pred cCccCCcccccCCceEEEEEEecC--CeEEEEEEeecccc--cchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCCCc
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHEN--GMLVAVKVINLEQK--GGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKGVD 776 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~--~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~ 776 (1009)
+|.+.+.||+|+||.||+|.+..+ +..||+|++..... ...+.+.+|+++++++ +||||+++++++... .....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVF-PGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeec-cccCC
Confidence 477888999999999999999877 88999999864322 2245678899999999 599999999875432 12335
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
..++++||+. ++|.+++.... .+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+||
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Df 149 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSGQ------PLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDF 149 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcC
Confidence 6788899885 69999987544 389999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 935 (1009)
|+++........ .........||..|+|||+..+ ..++.++||||+||++|+|++|+.||....... .......
T Consensus 150 g~a~~~~~~~~~----~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~-~~~~~~~ 224 (332)
T cd07857 150 GLARGFSENPGE----NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVD-QLNQILQ 224 (332)
T ss_pred CCceeccccccc----ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHH-HHHHHHH
Confidence 999876542211 1112234568999999998765 468999999999999999999999986432110 0000000
Q ss_pred Hh--ccch-hhhccCCC-------CCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 936 RA--LPEK-VMEIVDPS-------LLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 936 ~~--~~~~-~~~~~d~~-------l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.. .+++ ...+.+.. ....+..+. ..........+.+++.+|++.||++|||+.|++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 225 VLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPF---ESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HhCCCCHHHHHhhhhhhHHHHHHhccccCCcch---HhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00 0000 11110000 000000000 0000011346889999999999999999999864
No 373
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=246.87 Aligned_cols=199 Identities=23% Similarity=0.406 Sum_probs=169.1
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
+|...++||+|.||+||+|+.+++++.||+|.++.++. +-.....+|+-+++.++|+|||+++++.. .....-
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlh-----sdkklt 77 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH-----SDKKLT 77 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhc-----cCceeE
Confidence 46667899999999999999999999999999976543 34578889999999999999999999843 447788
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+|+|||. .+|..|....... ++.+.+..++.|+++|+.|+|++ .+.|||+||.|.+|+.+|+.|++|||+|
T Consensus 78 lvfe~cd-qdlkkyfdslng~-----~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfgla 148 (292)
T KOG0662|consen 78 LVFEFCD-QDLKKYFDSLNGD-----LDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLA 148 (292)
T ss_pred EeHHHhh-HHHHHHHHhcCCc-----CCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchh
Confidence 9999994 5999999876553 89999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCCCC-CCCcccchHHHHHHHHHHh-CCCCCcc
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGE-ASMRGGVYSYGILLLEIFT-RRRPTES 922 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~Gvvl~ellt-g~~p~~~ 922 (1009)
+-....- ......+-|..|.+|.++.+.. |+...|+||.||++.|+.. |++-|..
T Consensus 149 rafgipv--------rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg 205 (292)
T KOG0662|consen 149 RAFGIPV--------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG 205 (292)
T ss_pred hhcCCce--------EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCC
Confidence 9765321 1122345789999999988864 6899999999999999998 5544543
No 374
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.97 E-value=3.4e-31 Score=289.97 Aligned_cols=266 Identities=23% Similarity=0.305 Sum_probs=194.3
Q ss_pred CccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc-chHHHHHHHHHHHhcC-CCCcceEEeeeeccccCCCceEEE
Q 047768 703 FSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG-GSKSFAAECEALRSIR-HRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
|.+.+.||+|+||+||+|....+++.||||++...... ......+|+..+++++ |+|++++++++.. ....++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~-----~~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRE-----NDELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhc-----CCcEEE
Confidence 56788999999999999999888999999998644321 2234567999999998 9999999998654 477899
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
||||+ +|+|.+++..... ..+++.++..++.|++.|+.|||++ +++|+||+|+||+++.++.++|+|||.++
T Consensus 76 v~e~~-~~~l~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~ 147 (283)
T cd07830 76 VFEYM-EGNLYQLMKDRKG----KPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAR 147 (283)
T ss_pred EEecC-CCCHHHHHHhccc----ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccce
Confidence 99999 8899999876541 1389999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhcc
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALP 939 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 939 (1009)
...... ......++..|+|||++.+ ..++.++||||||+++|||++|+.||......+ ....... ...
T Consensus 148 ~~~~~~---------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~-~~~~~~~-~~~ 216 (283)
T cd07830 148 EIRSRP---------PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID-QLYKICS-VLG 216 (283)
T ss_pred eccCCC---------CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH-HHHHHHH-hcC
Confidence 654321 1123457889999998744 557899999999999999999999986432110 0111000 000
Q ss_pred ch----------hhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 940 EK----------VMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 940 ~~----------~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.. ....++..+...... ....... .....+.+++.+|++.+|++|||+.|++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 217 TPTKQDWPEGYKLASKLGFRFPQFAPT--SLHQLIP-NASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred CCChhhhhhHhhhhccccccccccccc--cHHHHcc-cCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 00 000000000000000 0000000 11356889999999999999999999975
No 375
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=3.2e-31 Score=286.23 Aligned_cols=245 Identities=22% Similarity=0.263 Sum_probs=187.1
Q ss_pred CcccccCCceEEEEEEecCCeEEEEEEeeccccc---chHHHHHHHHHHH-hcCCCCcceEEeeeeccccCCCceEEEEE
Q 047768 707 NTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG---GSKSFAAECEALR-SIRHRNLIKIVTICSSIDFKGVDFKALVY 782 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~-~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 782 (1009)
+.||+|+||.||+|....+++.||||+++..... ....+..|..++. ..+|+|++++++++.. ....++|+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-----~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQS-----KDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEc-----CCeEEEEE
Confidence 5699999999999999888999999998643211 1223445555443 4589999999998754 36789999
Q ss_pred eccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccccc
Q 047768 783 EYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 862 (1009)
Q Consensus 783 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~ 862 (1009)
||+++++|.+++.... .+++..+..++.|++.||.|||+. +++||||+|+||++++++.+|++|||+++..
T Consensus 77 e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 147 (260)
T cd05611 77 EYLNGGDCASLIKTLG------GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNG 147 (260)
T ss_pred eccCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceec
Confidence 9999999999997654 378999999999999999999998 9999999999999999999999999998754
Q ss_pred CCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchh
Q 047768 863 SASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKV 942 (1009)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 942 (1009)
.. .....|+..|+|||...+..++.++||||||+++|||++|..||..... ..........
T Consensus 148 ~~------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~-- 208 (260)
T cd05611 148 LE------------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP-----DAVFDNILSR-- 208 (260)
T ss_pred cc------------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHhc--
Confidence 32 1124578899999999888899999999999999999999999964321 1111110000
Q ss_pred hhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 047768 943 MEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLC 998 (1009)
Q Consensus 943 ~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~ 998 (1009)
.... + ......+...+.+++.+|++.+|++||++.++.+.+.
T Consensus 209 ------~~~~-~-------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 209 ------RINW-P-------EEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred ------ccCC-C-------CcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 0000 0 0001123456889999999999999998876655443
No 376
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=1.8e-31 Score=299.87 Aligned_cols=274 Identities=19% Similarity=0.233 Sum_probs=197.6
Q ss_pred HhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--cchHHHHHHHHHHHhcCCCCcceEEeeeecccc-CCC
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--GGSKSFAAECEALRSIRHRNLIKIVTICSSIDF-KGV 775 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~ 775 (1009)
..++|++.+.||+|+||.||+|....+++.||||+++.... ...+.+.+|++++++++||||+++++++..... ...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 45689999999999999999999988999999999854322 123567899999999999999999998754311 122
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
...++|+||+ +++|.+++... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++|
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~~-------~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~d 161 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKHE-------KLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILD 161 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEee
Confidence 3568999999 77999888643 288999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHH
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFA 934 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 934 (1009)
||++...... .....+++.|+|||.+.+ ..++.++||||+||++|++++|+.||....... ......
T Consensus 162 fg~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~-~~~~~~ 229 (343)
T cd07880 162 FGLARQTDSE-----------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLD-QLMEIM 229 (343)
T ss_pred cccccccccC-----------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH
Confidence 9999754321 123457889999998876 457899999999999999999999987432110 011111
Q ss_pred HHh--ccchhhhccCCCCCCh-----hhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 935 KRA--LPEKVMEIVDPSLLPL-----EEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 935 ~~~--~~~~~~~~~d~~l~~~-----~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
... .+..+.+.+...-... +..+..............+.+++.+|++.||++|||+.+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 230 KVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 100 0111111111000000 000000000000122345789999999999999999999984
No 377
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=1.9e-31 Score=291.45 Aligned_cols=256 Identities=24% Similarity=0.329 Sum_probs=201.0
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhcC-CCCcceEEeeeeccccCCCc
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSIR-HRNLIKIVTICSSIDFKGVD 776 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~ 776 (1009)
++|.+.+.||+|+||.||+|....+++.||+|++.... ....+.+.+|++++++++ ||||+++++++. ...
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~-----~~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQ-----DEE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhc-----CCc
Confidence 36888999999999999999999899999999986432 223467888999999998 999999998754 346
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
..++||||+++++|.+++.... .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++++||
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df 146 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRKYG------SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDF 146 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCC
Confidence 7899999999999999998754 389999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCCcc------------ccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccc
Q 047768 857 GLAKFLSASPLGNVV------------ETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMF 924 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~ 924 (1009)
|++............ ..........|+..|+|||+.....++.++||||+|+++|++++|+.||....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 226 (280)
T cd05581 147 GTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN 226 (280)
T ss_pred ccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc
Confidence 999876543211000 00122234567899999999988889999999999999999999999987432
Q ss_pred cCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCH----HHHHH
Q 047768 925 NEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEM----TDVVV 995 (1009)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~----~evl~ 995 (1009)
. ...... ....... .+....+.+.+++.+|++.+|.+||++ .|++.
T Consensus 227 ~-----~~~~~~--------~~~~~~~------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 227 E-----YLTFQK--------ILKLEYS------------FPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred H-----HHHHHH--------HHhcCCC------------CCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 1 010110 0000000 001223457899999999999999999 77654
No 378
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=3.3e-31 Score=289.97 Aligned_cols=267 Identities=24% Similarity=0.335 Sum_probs=197.4
Q ss_pred CccCCcccccCCceEEEEEEecCCeEEEEEEeeccc--ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEE
Q 047768 703 FSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ--KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
|+..+.||+|+||.||+|+...+++.||+|+++... ....+.+..|++++++++|+|++++++++... ...++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTE-----RKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcC-----CceEE
Confidence 556788999999999999999889999999997553 33346788899999999999999999986543 67899
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
|+||++ ++|.+++..... .+++.++..++.+++.|++|||+. +|+||||+|+||++++++.+||+|||.++
T Consensus 76 v~e~~~-~~l~~~i~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~ 146 (282)
T cd07829 76 VFEYCD-MDLKKYLDKRPG-----PLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLAR 146 (282)
T ss_pred EecCcC-cCHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCccc
Confidence 999997 599999987642 389999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh--
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA-- 937 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~-- 937 (1009)
...... .......++..|+|||.+.+. .++.++|||||||++||+++|+.||...... ..........
T Consensus 147 ~~~~~~--------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~~~ 217 (282)
T cd07829 147 AFGIPL--------RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI-DQLFKIFQILGT 217 (282)
T ss_pred ccCCCc--------cccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHHHhCC
Confidence 654321 111123457789999998776 7899999999999999999999998643211 0011111000
Q ss_pred -ccchhhhcc-----CCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 938 -LPEKVMEIV-----DPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 938 -~~~~~~~~~-----d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.+....... +......... .. ..........+.+++.+|+..+|++||++.+++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 218 PTEESWPGVTKLPDYKPTFPKFPPK-DL--EKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred CcHHHHHhhcccccccccccccCcc-ch--HHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 000011110 0000000000 00 0000011456889999999999999999999975
No 379
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=4.8e-31 Score=284.89 Aligned_cols=251 Identities=21% Similarity=0.258 Sum_probs=192.9
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc-----ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCc
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ-----KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVD 776 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 776 (1009)
+|.+.+.||+|+||.||+|.+...+..+++|+++... ......+.+|+.++++++||||+++++++.. ..
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLE-----RD 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhc-----CC
Confidence 4788899999999999999998776667777764321 1223457789999999999999999998643 35
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
..++|+||+++++|.+++...... ...+++.+++.++.|++.|+.|||+. +++|+||+|+||+++. +.+|++||
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~ 149 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEELKHT--GKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDF 149 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHHHhhc--ccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeeccc
Confidence 689999999999999998753221 12489999999999999999999998 9999999999999975 56999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHH
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKR 936 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 936 (1009)
|.++...... .......|+..|+|||...+..++.++||||||+++|+|++|..||.... .......
T Consensus 150 g~~~~~~~~~--------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~-----~~~~~~~ 216 (260)
T cd08222 150 GVSRLLMGSC--------DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN-----FLSVVLR 216 (260)
T ss_pred CceeecCCCc--------ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHH
Confidence 9997664321 11123457889999999988888999999999999999999999986321 1111111
Q ss_pred hccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 937 ALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 937 ~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
..... .+. ....+..++.+++.+|++.+|++||++.|+++
T Consensus 217 ~~~~~-----~~~--------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 217 IVEGP-----TPS--------------LPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred HHcCC-----CCC--------------CcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 11000 000 01133456789999999999999999999975
No 380
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.8e-32 Score=281.20 Aligned_cols=271 Identities=21% Similarity=0.256 Sum_probs=199.9
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcC-C-C----CcceEEeeeeccccC
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIR-H-R----NLIKIVTICSSIDFK 773 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-~----niv~l~~~~~~~~~~ 773 (1009)
..+|.+...+|+|.||.|-++.+.+++..||||+++.-. ...+...-|+++++++. + | -++++.+|+ +
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wF-----d 161 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWF-----D 161 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhh-----h
Confidence 678999999999999999999999899999999986332 22345667999999993 2 2 255555553 3
Q ss_pred CCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCC------
Q 047768 774 GVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDH------ 847 (1009)
Q Consensus 774 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~------ 847 (1009)
-.++.|+|+|.+ |-|+.+++.++.. .+++...+..|+.|++++++|||+. +++|-||||+|||+.+
T Consensus 162 yrghiCivfell-G~S~~dFlk~N~y----~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~ 233 (415)
T KOG0671|consen 162 YRGHICIVFELL-GLSTFDFLKENNY----IPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKT 233 (415)
T ss_pred ccCceEEEEecc-ChhHHHHhccCCc----cccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEE
Confidence 347889999988 7799999998664 4699999999999999999999999 9999999999999842
Q ss_pred --------------CCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHH
Q 047768 848 --------------DMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEI 913 (1009)
Q Consensus 848 --------------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~el 913 (1009)
+..+||+|||.|+..... ....+.|..|+|||++.+-.++.++||||+||||.|+
T Consensus 234 ~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~-----------hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~El 302 (415)
T KOG0671|consen 234 YNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH-----------HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVEL 302 (415)
T ss_pred eccCCccceeccCCCcceEEEecCCcceeccC-----------cceeeeccccCCchheeccCcCCccCceeeeeEEEEe
Confidence 335899999999875532 1346789999999999999999999999999999999
Q ss_pred HhCCCCCcccccC-CccHHHHHHHhccchhhhcc------CCC-C-------------CChhhhhhhccccccHHHHHHH
Q 047768 914 FTRRRPTESMFNE-GLTLHEFAKRALPEKVMEIV------DPS-L-------------LPLEEERTNSRRVRNEECLVAV 972 (1009)
Q Consensus 914 ltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~------d~~-l-------------~~~~~~r~~~~~~~~~~~~~~l 972 (1009)
.||..-|....+. ...+.+-+...+|..+..-. ... + ...+............++..++
T Consensus 303 ytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~L 382 (415)
T KOG0671|consen 303 YTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQL 382 (415)
T ss_pred eccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHH
Confidence 9999988654321 11122222222222211100 000 0 0000011111122333455679
Q ss_pred HHHHhhccCCCCCCCCCHHHHHH
Q 047768 973 IKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 973 ~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
++++.+++..||.+|+|+.|++.
T Consensus 383 fDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 383 FDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred HHHHHHHHccCccccccHHHHhc
Confidence 99999999999999999999875
No 381
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.97 E-value=6.5e-31 Score=288.44 Aligned_cols=257 Identities=23% Similarity=0.298 Sum_probs=196.3
Q ss_pred cCccCCcccccCCceEEEEEEe---cCCeEEEEEEeeccc----ccchHHHHHHHHHHHhc-CCCCcceEEeeeeccccC
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLH---ENGMLVAVKVINLEQ----KGGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFK 773 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 773 (1009)
+|++.+.||+|+||.||+|+.. .+++.||||+++... ....+.+.+|+++++++ +||||+++.+++..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~---- 76 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQT---- 76 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeec----
Confidence 4777899999999999999864 357889999986432 12345688999999999 59999999987543
Q ss_pred CCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEE
Q 047768 774 GVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHV 853 (1009)
Q Consensus 774 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl 853 (1009)
....++||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +++||||+|+||+++.++.+++
T Consensus 77 -~~~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l 146 (288)
T cd05583 77 -DTKLHLILDYVNGGELFTHLYQRE------HFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVL 146 (288)
T ss_pred -CCEEEEEEecCCCCcHHHHHhhcC------CcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEE
Confidence 367899999999999999987643 388999999999999999999998 9999999999999999999999
Q ss_pred eccccccccCCCCCCCccccCCccccccccccccCccccCCCC--CCCcccchHHHHHHHHHHhCCCCCcccccCCccHH
Q 047768 854 SDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGE--ASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLH 931 (1009)
Q Consensus 854 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~ 931 (1009)
+|||+++....... .......|+..|+|||...+.. .+.++||||||+++|||++|+.||...... ....
T Consensus 147 ~dfg~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-~~~~ 218 (288)
T cd05583 147 TDFGLSKEFLAEEE-------ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ-NSQS 218 (288)
T ss_pred EECccccccccccc-------cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc-chHH
Confidence 99999876543211 1112345789999999987765 788999999999999999999998632111 1111
Q ss_pred HHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 047768 932 EFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHA 1000 (1009)
Q Consensus 932 ~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i 1000 (1009)
+...... ... ... .......+.+++.+|++.+|++|||+.++.+.|+..
T Consensus 219 ~~~~~~~--------~~~-~~~-----------~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 219 EISRRIL--------KSK-PPF-----------PKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred HHHHHHH--------ccC-CCC-----------CcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 1111110 000 000 011234577899999999999999999888777653
No 382
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=3e-31 Score=298.19 Aligned_cols=270 Identities=20% Similarity=0.243 Sum_probs=197.0
Q ss_pred HhccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc--ccchHHHHHHHHHHHhcCCCCcceEEeeeecccc-CCC
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ--KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDF-KGV 775 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~ 775 (1009)
..++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|+.++++++|||++++.+++...+. ...
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 3568999999999999999999999889999999986432 2233567789999999999999999887543321 222
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
...++|+||+ +++|.+++... .+++.++..++.|+++|++|||+. +|+||||||+||++++++.+||+|
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~~-------~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~d 161 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKCQ-------KLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILD 161 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcc
Confidence 3479999998 67999998753 389999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHH
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFA 934 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 934 (1009)
||++...... .....++..|+|||.+.+ ..++.++||||+||++||+++|+.||...... ..+....
T Consensus 162 fg~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~-~~~~~i~ 229 (343)
T cd07851 162 FGLARHTDDE-----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI-DQLKRIM 229 (343)
T ss_pred cccccccccc-----------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHH
Confidence 9999865321 123457889999998765 36789999999999999999999999643211 0011110
Q ss_pred HHh--ccch---------hhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 935 KRA--LPEK---------VMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 935 ~~~--~~~~---------~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
... .++. ...++....... .. .. .........++.+++.+|++.+|++|||+.||+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~-~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 230 NLVGTPDEELLQKISSESARNYIQSLPQMP-KK--DF-KEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HhcCCCCHHHHhhccchhHHHHHHhccccC-CC--CH-HHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 000 0000 011100000000 00 00 0000012456889999999999999999999875
No 383
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=1.1e-30 Score=286.87 Aligned_cols=252 Identities=23% Similarity=0.314 Sum_probs=192.2
Q ss_pred cCccCCcccccCCceEEEEEEe---cCCeEEEEEEeeccc----ccchHHHHHHHHHHHhc-CCCCcceEEeeeeccccC
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLH---ENGMLVAVKVINLEQ----KGGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFK 773 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 773 (1009)
+|++.+.||+|+||.||.|... .+|+.||+|+++... ....+.+.+|+++++++ +|+||+++++++..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~---- 76 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT---- 76 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeec----
Confidence 4778899999999999999875 478899999986432 12346688899999999 59999999987543
Q ss_pred CCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEE
Q 047768 774 GVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHV 853 (1009)
Q Consensus 774 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl 853 (1009)
....++|+||+++++|.+++.... .+++..+..++.|++.||.|||+. +++||||+|+||+++.++.+||
T Consensus 77 -~~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl 146 (290)
T cd05613 77 -DTKLHLILDYINGGELFTHLSQRE------RFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVL 146 (290)
T ss_pred -CCeEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEE
Confidence 367889999999999999997654 278899999999999999999998 9999999999999999999999
Q ss_pred eccccccccCCCCCCCccccCCccccccccccccCccccCCC--CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHH
Q 047768 854 SDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG--EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLH 931 (1009)
Q Consensus 854 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~ 931 (1009)
+|||+++....... .......|+..|+|||.+... .++.++||||||+++|||++|+.||..... .....
T Consensus 147 ~dfg~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-~~~~~ 218 (290)
T cd05613 147 TDFGLSKEFHEDEV-------ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE-KNSQA 218 (290)
T ss_pred eeCccceecccccc-------cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc-cccHH
Confidence 99999986543211 111234588999999998753 468899999999999999999999863211 11112
Q ss_pred HHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 047768 932 EFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRM-----EMTDVVV 995 (1009)
Q Consensus 932 ~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rp-----t~~evl~ 995 (1009)
......... ..+. +......+.+++.+|++.||++|| ++.+++.
T Consensus 219 ~~~~~~~~~---------~~~~-----------~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 219 EISRRILKS---------EPPY-----------PQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred HHHHHhhcc---------CCCC-----------CccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 221111000 0000 011234577999999999999997 6666654
No 384
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=3.5e-32 Score=288.06 Aligned_cols=195 Identities=27% Similarity=0.408 Sum_probs=168.6
Q ss_pred CCcccccCCceEEEEEEecCCeEEEEEEeeccc--ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEe
Q 047768 706 SNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ--KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYE 783 (1009)
Q Consensus 706 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 783 (1009)
.+.||.|-||+||-|+++.+|+.||||+++... .....++++|+.+++++.||.||.+...|. ..+..++|||
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~E-----T~ervFVVME 643 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFE-----TPERVFVVME 643 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeec-----CCceEEEEeh
Confidence 478999999999999999999999999996432 234578999999999999999999988754 4478999999
Q ss_pred ccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCC---CceEEecccccc
Q 047768 784 YMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHD---MVAHVSDFGLAK 860 (1009)
Q Consensus 784 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~---~~~kl~DfGla~ 860 (1009)
.+ +|+..+++-....+ .+++...+.+..||+.||.|||.+ +|||+||||+|||+.+. ..+|+||||+||
T Consensus 644 Kl-~GDMLEMILSsEkg----RL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfAR 715 (888)
T KOG4236|consen 644 KL-HGDMLEMILSSEKG----RLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFAR 715 (888)
T ss_pred hh-cchHHHHHHHhhcc----cchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeecccccee
Confidence 99 56766666544332 388888899999999999999999 99999999999999654 479999999999
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcc
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTES 922 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~ 922 (1009)
++... ......+||+.|.|||++..+.|...-|+||.||++|--++|..||..
T Consensus 716 iIgEk---------sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE 768 (888)
T KOG4236|consen 716 IIGEK---------SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE 768 (888)
T ss_pred ecchh---------hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC
Confidence 98764 334457899999999999999999999999999999999999999963
No 385
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=4.2e-31 Score=298.12 Aligned_cols=265 Identities=21% Similarity=0.289 Sum_probs=218.4
Q ss_pred HHHHHHHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhc-CCCCcceEEeeeeccc
Q 047768 693 YKELSKATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSI-RHRNLIKIVTICSSID 771 (1009)
Q Consensus 693 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 771 (1009)
++.+...++-|.+.+.||+|.+|.||+++.+.+++.+|||+..... ...++...|..+++.. .|||++.++|++....
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~ 89 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKD 89 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence 3344445678999999999999999999999999999999986543 3467788899999888 6999999999988776
Q ss_pred cCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCce
Q 047768 772 FKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 851 (1009)
Q Consensus 772 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~ 851 (1009)
-..++..++|||||.+||..|+++.... ..+.|+.+..|++.++.|+.+||.. .++|||||-.|||++.++.|
T Consensus 90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~g----~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~V 162 (953)
T KOG0587|consen 90 PGNGDQLWLVMEFCGGGSVTDLVKNTKG----NRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEV 162 (953)
T ss_pred CCCCCeEEEEeeccCCccHHHHHhhhcc----cchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcE
Confidence 6778999999999999999999987653 2489999999999999999999999 99999999999999999999
Q ss_pred EEeccccccccCCCCCCCccccCCccccccccccccCccccCC-----CCCCCcccchHHHHHHHHHHhCCCCCcccccC
Q 047768 852 HVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-----GEASMRGGVYSYGILLLEIFTRRRPTESMFNE 926 (1009)
Q Consensus 852 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~ 926 (1009)
|++|||.+..+.... .......||+.|||||++.- ..|+..+|+||+|++..||.-|.+|+.++..-
T Consensus 163 KLvDFGvSaQldsT~--------grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm 234 (953)
T KOG0587|consen 163 KLVDFGVSAQLDSTV--------GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM 234 (953)
T ss_pred EEeeeeeeeeeeccc--------ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh
Confidence 999999998776432 44556789999999998644 35678999999999999999999998755321
Q ss_pred CccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 927 GLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
+.++. .+. .|......+..|.+++.+++..|+..|.+.||++.++++
T Consensus 235 ----------------raLF~-----IpR-NPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 235 ----------------RALFL-----IPR-NPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred ----------------hhhcc-----CCC-CCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 11110 000 011122345578889999999999999999999999875
No 386
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=2.4e-30 Score=312.77 Aligned_cols=148 Identities=32% Similarity=0.472 Sum_probs=130.8
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc---chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCc
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG---GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVD 776 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 776 (1009)
.++|.+.++||+|+||+||+|.+..+++.||||+++..... ....+.+|+.+++.++||||+++++++.. ..
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-----~~ 77 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQS-----AN 77 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEE-----CC
Confidence 35789999999999999999999988999999999644321 23578899999999999999999987654 36
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
..++||||+.+++|.+++.... .+++..++.++.|++.||+|||+. +||||||||+|||++.++.+||+||
T Consensus 78 ~~~lVmEy~~g~~L~~li~~~~------~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DF 148 (669)
T cd05610 78 NVYLVMEYLIGGDVKSLLHIYG------YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDF 148 (669)
T ss_pred EEEEEEeCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeC
Confidence 7899999999999999997654 278889999999999999999998 9999999999999999999999999
Q ss_pred ccccc
Q 047768 857 GLAKF 861 (1009)
Q Consensus 857 Gla~~ 861 (1009)
|+++.
T Consensus 149 Gls~~ 153 (669)
T cd05610 149 GLSKV 153 (669)
T ss_pred CCCcc
Confidence 99873
No 387
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=2.5e-32 Score=267.11 Aligned_cols=253 Identities=25% Similarity=0.258 Sum_probs=188.3
Q ss_pred CcccccCCceEEEEEEecCCeEEEEEEeecccc-cchHHHHHHHHHHHh-cCCCCcceEEeeeeccccCCCceEEEEEec
Q 047768 707 NTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-GGSKSFAAECEALRS-IRHRNLIKIVTICSSIDFKGVDFKALVYEY 784 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~~~~~~lv~e~ 784 (1009)
..||.|+||+|++-.+++.|+..|||+++.... ...+++..|.+...+ -+.||||+++|.+... +..++.||.
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~E-----GdcWiCMEL 144 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSE-----GDCWICMEL 144 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcC-----CceeeeHHH
Confidence 569999999999999999999999999976544 445778888886544 4799999999987542 567999999
Q ss_pred cCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccCC
Q 047768 785 MQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSA 864 (1009)
Q Consensus 785 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~ 864 (1009)
| ..|+..+.+.--. .....+++.-.-+|+...+.||.||.+.. .|||||+||+|||++..|.+|+||||.+..+..
T Consensus 145 M-d~SlDklYk~vy~-vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~ 220 (361)
T KOG1006|consen 145 M-DISLDKLYKRVYS-VQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD 220 (361)
T ss_pred H-hhhHHHHHHHHHH-HHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHH
Confidence 9 4576554331000 00123888888899999999999999875 899999999999999999999999999987654
Q ss_pred CCCCCccccCCccccccccccccCccccCCC--CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchh
Q 047768 865 SPLGNVVETPSSSIGVKGTIGYVAPEYGLGG--EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKV 942 (1009)
Q Consensus 865 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 942 (1009)
+ .+.+...|...|||||.+... .|+.++||||+|+++||+.||+.||..+.+- -+...+....+.
T Consensus 221 S---------iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~sv----feql~~Vv~gdp 287 (361)
T KOG1006|consen 221 S---------IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSV----FEQLCQVVIGDP 287 (361)
T ss_pred H---------HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHH----HHHHHHHHcCCC
Confidence 3 222335688899999987653 4889999999999999999999998755431 111111111111
Q ss_pred hhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 943 MEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 943 ~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
..+ ... ....+....+..++..|+..|-..||...++..
T Consensus 288 p~l-----~~~---------~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 288 PIL-----LFD---------KECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred Cee-----cCc---------ccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 111 000 011223346889999999999999999998865
No 388
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7e-31 Score=289.24 Aligned_cols=240 Identities=24% Similarity=0.242 Sum_probs=191.6
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCCCceE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
.+.|.....+|.|+|+.|-.+.+..+++..|||++... .....+|+.++... +|||++++.+.+.+ ..+.
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~-----~~~~ 391 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYED-----GKEI 391 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeecceecC-----Ccee
Confidence 34667777799999999999999999999999999644 23445677676666 79999999998654 4789
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceee-CCCCceEEeccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLL-DHDMVAHVSDFG 857 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill-~~~~~~kl~DfG 857 (1009)
++|||.+.++-+.+.+..... .. .++..|+.+++.|+.|||++ ||||||+||+|||+ ++.++++|+|||
T Consensus 392 ~~v~e~l~g~ell~ri~~~~~------~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG 461 (612)
T KOG0603|consen 392 YLVMELLDGGELLRRIRSKPE------FC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFG 461 (612)
T ss_pred eeeehhccccHHHHHHHhcch------hH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEec
Confidence 999999999988777766542 23 67778999999999999998 99999999999999 699999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
.++...+. ....+-|..|.|||+.....|++++|+||+|+++|+|++|+.||.....+ .+...+.
T Consensus 462 ~a~~~~~~-----------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~----~ei~~~i 526 (612)
T KOG0603|consen 462 FWSELERS-----------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG----IEIHTRI 526 (612)
T ss_pred hhhhCchh-----------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch----HHHHHhh
Confidence 99876543 11234588999999999999999999999999999999999999865433 2222222
Q ss_pred ccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 938 LPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 938 ~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
...+..+ ....+..+++.+|++.||.+||+|+|+..
T Consensus 527 ~~~~~s~----------------------~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 527 QMPKFSE----------------------CVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred cCCcccc----------------------ccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 1221111 11124568999999999999999999865
No 389
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-31 Score=307.20 Aligned_cols=209 Identities=26% Similarity=0.347 Sum_probs=181.6
Q ss_pred HHHHHHHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecc---cccchHHHHHHHHHHHhcCCCCcceEEeeeec
Q 047768 693 YKELSKATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLE---QKGGSKSFAAECEALRSIRHRNLIKIVTICSS 769 (1009)
Q Consensus 693 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 769 (1009)
..++....++|.+.+.||+|+||.|..++++.+++.||+|+++.. ......-|..|-++|..-+.+-|++++-.
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyA--- 143 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYA--- 143 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHH---
Confidence 345556678999999999999999999999999999999999653 23445779999999999899999988754
Q ss_pred cccCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCC
Q 047768 770 IDFKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDM 849 (1009)
Q Consensus 770 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~ 849 (1009)
|++..+.|+|||||+||+|-..+.+... +++..++.++..|+-||.-+|+. |+|||||||+|||+|..|
T Consensus 144 --FQD~~~LYlVMdY~pGGDlltLlSk~~~------~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~G 212 (1317)
T KOG0612|consen 144 --FQDERYLYLVMDYMPGGDLLTLLSKFDR------LPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSG 212 (1317)
T ss_pred --hcCccceEEEEecccCchHHHHHhhcCC------ChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccC
Confidence 6677999999999999999999988762 88999999999999999999999 999999999999999999
Q ss_pred ceEEeccccccccCCCCCCCccccCCccccccccccccCccccCC-----CCCCCcccchHHHHHHHHHHhCCCCCcc
Q 047768 850 VAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-----GEASMRGGVYSYGILLLEIFTRRRPTES 922 (1009)
Q Consensus 850 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwS~Gvvl~elltg~~p~~~ 922 (1009)
++|++|||-+-.+...+. -.+...+|||.|++||+++. +.|++.+|-||+||++|||+.|..||..
T Consensus 213 HikLADFGsClkm~~dG~-------V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa 283 (1317)
T KOG0612|consen 213 HIKLADFGSCLKMDADGT-------VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA 283 (1317)
T ss_pred cEeeccchhHHhcCCCCc-------EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH
Confidence 999999998877764321 23334679999999998654 5789999999999999999999999973
No 390
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=7.1e-30 Score=274.01 Aligned_cols=237 Identities=29% Similarity=0.331 Sum_probs=190.2
Q ss_pred ccccCCceEEEEEEecCCeEEEEEEeeccccc---chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEecc
Q 047768 709 IGRGSFGFVYKGVLHENGMLVAVKVINLEQKG---GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYEYM 785 (1009)
Q Consensus 709 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 785 (1009)
||+|+||.||+|.+..+++.||+|+++..... ..+.+..|++++++++|+|++++++.+. .....++||||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQ-----TEEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHee-----cCCeeEEEEecC
Confidence 69999999999999888999999998654322 3457889999999999999999998754 347889999999
Q ss_pred CCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccCCC
Q 047768 786 QNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSAS 865 (1009)
Q Consensus 786 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 865 (1009)
++++|.+++.... .+++..+..++.|++.|+.|+|+. +++|+||+|+||+++.++.++++|||.+......
T Consensus 76 ~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~ 146 (250)
T cd05123 76 PGGELFSHLSKEG------RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSE 146 (250)
T ss_pred CCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccC
Confidence 9999999998754 389999999999999999999998 9999999999999999999999999999865432
Q ss_pred CCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchhhhc
Q 047768 866 PLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKVMEI 945 (1009)
Q Consensus 866 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 945 (1009)
. .......++..|+|||...+..++.++|+||||+++||+++|+.||..... .+.......
T Consensus 147 ~--------~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~------ 207 (250)
T cd05123 147 G--------SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-----KEIYEKILK------ 207 (250)
T ss_pred C--------CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHhc------
Confidence 1 112235678899999999888899999999999999999999999964321 111111111
Q ss_pred cCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 047768 946 VDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTD 992 (1009)
Q Consensus 946 ~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~e 992 (1009)
... ..+ ......+.+++.+|+..||++||++++
T Consensus 208 --~~~-~~~-----------~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 208 --DPL-RFP-----------EFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred --CCC-CCC-----------CCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 000 000 011345789999999999999999954
No 391
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.6e-31 Score=276.01 Aligned_cols=264 Identities=24% Similarity=0.358 Sum_probs=200.0
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--c-----chHHHHHHHHHHHhcCCCCcceEEeeeecccc
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--G-----GSKSFAAECEALRSIRHRNLIKIVTICSSIDF 772 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 772 (1009)
.++|-..+.||+|+|++||+|.+....+.||||+-..... + -.+...+|.++-+.++||.||++++|+.-
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl--- 538 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL--- 538 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee---
Confidence 4577788899999999999999998899999998743321 1 12456789999999999999999999764
Q ss_pred CCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeC---CCC
Q 047768 773 KGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLD---HDM 849 (1009)
Q Consensus 773 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~---~~~ 849 (1009)
+.+..|-|+|||+|-+|.-|++.++. +++.++..|+.||+.||.||.+. .|+|||-||||.|||+. ..|
T Consensus 539 -DtdsFCTVLEYceGNDLDFYLKQhkl------mSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacG 610 (775)
T KOG1151|consen 539 -DTDSFCTVLEYCEGNDLDFYLKQHKL------MSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACG 610 (775)
T ss_pred -ccccceeeeeecCCCchhHHHHhhhh------hhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccc
Confidence 34677999999999999999998874 89999999999999999999986 67999999999999994 457
Q ss_pred ceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCC----CCCCcccchHHHHHHHHHHhCCCCCccccc
Q 047768 850 VAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG----EASMRGGVYSYGILLLEIFTRRRPTESMFN 925 (1009)
Q Consensus 850 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwS~Gvvl~elltg~~p~~~~~~ 925 (1009)
.+||+|||+++++....+... +.........||.+|.+||.+.-+ .++.|+||||.||++|..+.|+.||+....
T Consensus 611 eIKITDFGLSKIMdddSy~~v-dGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs 689 (775)
T KOG1151|consen 611 EIKITDFGLSKIMDDDSYNSV-DGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS 689 (775)
T ss_pred eeEeeecchhhhccCCccCcc-cceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchh
Confidence 899999999999987654322 222334456799999999976543 468899999999999999999999985432
Q ss_pred CCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 047768 926 EGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVV 994 (1009)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl 994 (1009)
....+.+ . .++...-..+|.+ . ....+...++++|+++--++|....++.
T Consensus 690 QQdILqe----N------TIlkAtEVqFP~K-----P----vVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 690 QQDILQE----N------TILKATEVQFPPK-----P----VVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred HHHHHhh----h------chhcceeccCCCC-----C----ccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 2111110 0 0111111111111 0 1112345788899998888888777664
No 392
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.4e-31 Score=271.57 Aligned_cols=204 Identities=23% Similarity=0.300 Sum_probs=172.2
Q ss_pred HhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCC
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKG 774 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 774 (1009)
...+|....+||+|+||.|-.|..+.+.+.+|||+++.+.. ++.+--..|-++|.-- +-|.++++..++..
T Consensus 347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQT----- 421 (683)
T KOG0696|consen 347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQT----- 421 (683)
T ss_pred eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhh-----
Confidence 34579999999999999999999999999999999975532 1222234566666655 67888888887544
Q ss_pred CceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEe
Q 047768 775 VDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 854 (1009)
Q Consensus 775 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~ 854 (1009)
.+..|.||||+.+|+|--.+++.+. +.+..+..+|.+||-||-|||++ +||+||||.+||++|.+|++||+
T Consensus 422 mDRLyFVMEyvnGGDLMyhiQQ~Gk------FKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~ 492 (683)
T KOG0696|consen 422 MDRLYFVMEYVNGGDLMYHIQQVGK------FKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIA 492 (683)
T ss_pred hhheeeEEEEecCchhhhHHHHhcc------cCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEee
Confidence 4789999999999999888887654 77788899999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccc
Q 047768 855 DFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMF 924 (1009)
Q Consensus 855 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~ 924 (1009)
|||+++.--- .......++||+.|+|||++...+|+.++|-|||||++|||+.|+.||+...
T Consensus 493 DFGmcKEni~--------~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD 554 (683)
T KOG0696|consen 493 DFGMCKENIF--------DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED 554 (683)
T ss_pred eccccccccc--------CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC
Confidence 9999985321 1234456899999999999999999999999999999999999999998543
No 393
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=8.6e-30 Score=270.62 Aligned_cols=223 Identities=19% Similarity=0.137 Sum_probs=175.8
Q ss_pred cCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEeccCCCCHH
Q 047768 712 GSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYEYMQNGSLE 791 (1009)
Q Consensus 712 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~ 791 (1009)
|.+|.||+++++.+++.||+|+++... .+.+|...+....|||++++++++.. ....++||||+++|+|.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~ 73 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVS-----EDSVFLVLQHAEGGKLW 73 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheec-----CCeEEEEEecCCCCCHH
Confidence 889999999999999999999986432 33455556666689999999998643 36789999999999999
Q ss_pred HHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccCCCCCCCcc
Q 047768 792 EWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSASPLGNVV 871 (1009)
Q Consensus 792 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 871 (1009)
+++.+.. .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++++|||.+......
T Consensus 74 ~~l~~~~------~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~------ 138 (237)
T cd05576 74 SHISKFL------NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS------ 138 (237)
T ss_pred HHHHHhc------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc------
Confidence 9997654 289999999999999999999998 9999999999999999999999999988655432
Q ss_pred ccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchhhhccCCCCC
Q 047768 872 ETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKVMEIVDPSLL 951 (1009)
Q Consensus 872 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 951 (1009)
..+..++..|+|||+..+..++.++||||+|+++|||++|+.|+...... ...... +
T Consensus 139 -----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~---------------~~~~~~--~- 195 (237)
T cd05576 139 -----CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG---------------INTHTT--L- 195 (237)
T ss_pred -----cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh---------------cccccc--c-
Confidence 11234567899999998888999999999999999999999886521100 000000 0
Q ss_pred ChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 047768 952 PLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDV 993 (1009)
Q Consensus 952 ~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~ev 993 (1009)
..+ ......+.+++.+|++.||++||++.+.
T Consensus 196 ~~~-----------~~~~~~~~~li~~~l~~dp~~R~~~~~~ 226 (237)
T cd05576 196 NIP-----------EWVSEEARSLLQQLLQFNPTERLGAGVA 226 (237)
T ss_pred CCc-----------ccCCHHHHHHHHHHccCCHHHhcCCCcc
Confidence 000 0122457789999999999999997443
No 394
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=1.9e-29 Score=296.93 Aligned_cols=277 Identities=19% Similarity=0.177 Sum_probs=172.1
Q ss_pred HhccCccCCcccccCCceEEEEEEecC----CeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEee-eeccccC
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLHEN----GMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTI-CSSIDFK 773 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~-~~~~~~~ 773 (1009)
..++|.+.+.||+|+||.||+|++..+ +..||||++..... .+....| .++...+.++..++.. .......
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 467899999999999999999999888 89999998753221 1111111 1122222222222211 1111113
Q ss_pred CCceEEEEEeccCCCCHHHHHhccCCCCC--------------ccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCC
Q 047768 774 GVDFKALVYEYMQNGSLEEWLHQRDDQLG--------------ICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLK 839 (1009)
Q Consensus 774 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~--------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk 839 (1009)
.....++|+||+.+++|.+++........ ........+..++.|++.||+|||++ +|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCC
Confidence 44678999999999999999876432100 00112344668999999999999999 99999999
Q ss_pred CCceeeCC-CCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCC----------------------C
Q 047768 840 PSNVLLDH-DMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG----------------------E 896 (1009)
Q Consensus 840 ~~Nill~~-~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~ 896 (1009)
|+|||++. ++.+||+|||+|+....... .......+|+.|||||.+... .
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~-------~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~ 355 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGIN-------YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLN 355 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccc-------cCCcccccCCCccChHHhhccCCCCCCccccccccccchhcccc
Confidence 99999986 58999999999986543211 122345789999999965332 2
Q ss_pred CCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh-cc-chhhhccCCCCCChhhhhhhccccccHHHHHHHHH
Q 047768 897 ASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA-LP-EKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIK 974 (1009)
Q Consensus 897 ~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~-~~-~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~ 974 (1009)
++.++|||||||++|||+++..|+.... .......... .. ..+...+.+..... .+.... . ......+..+
T Consensus 356 ~~~k~DVwSlGviL~el~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~-~d~~~~~~~d 428 (566)
T PLN03225 356 LPDRFDIYSAGLIFLQMAFPNLRSDSNL---IQFNRQLKRNDYDLVAWRKLVEPRASPD--LRRGFE-V-LDLDGGAGWE 428 (566)
T ss_pred CCCCcccHHHHHHHHHHHhCcCCCchHH---HHHHHHHHhcCCcHHHHHHhhccccchh--hhhhhh-h-ccccchHHHH
Confidence 3456799999999999999776654210 0011111000 00 00111111110000 000000 0 0001123458
Q ss_pred HHhhccCCCCCCCCCHHHHHHH
Q 047768 975 TGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 975 l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
++.+|++.||++|||+.|+++.
T Consensus 429 Li~~mL~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 429 LLKSMMRFKGRQRISAKAALAH 450 (566)
T ss_pred HHHHHccCCcccCCCHHHHhCC
Confidence 9999999999999999999863
No 395
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=1.5e-30 Score=248.88 Aligned_cols=270 Identities=19% Similarity=0.280 Sum_probs=206.1
Q ss_pred HhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcC-CCCcceEEeeeeccccCCCce
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIR-HRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~ 777 (1009)
..++|++.+++|+|.|++||.|....+...++||+++.-. .+.+.+|+++++.+. ||||++++++..+. .+..
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp---~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDP---ESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCc---cccC
Confidence 4578999999999999999999988889999999997443 478899999999996 99999999987654 4466
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCC-CceEEecc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDF 856 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~-~~~kl~Df 856 (1009)
+.+|+||+.+.+....... ++..++..+..++++||.|+|+. ||+|||+||.|++||.. -..+++|+
T Consensus 110 paLiFE~v~n~Dfk~ly~t---------l~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDW 177 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLYPT---------LTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDW 177 (338)
T ss_pred chhHhhhhccccHHHHhhh---------hchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeec
Confidence 7899999999887776543 66778899999999999999999 99999999999999865 47999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCC-CCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHH
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG-GEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAK 935 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 935 (1009)
|+|.++.++...+. .+.+..|--||.+.+ ..|+..-|+|||||++..|+..+.||....+...++.+++.
T Consensus 178 GLAEFYHp~~eYnV---------RVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIak 248 (338)
T KOG0668|consen 178 GLAEFYHPGKEYNV---------RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAK 248 (338)
T ss_pred chHhhcCCCceeee---------eeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHH
Confidence 99999887643221 234566788998776 45788999999999999999999999766555556666655
Q ss_pred HhccchhhhccCCCCCC-----------hhhhhhhccc--cccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 936 RALPEKVMEIVDPSLLP-----------LEEERTNSRR--VRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 936 ~~~~~~~~~~~d~~l~~-----------~~~~r~~~~~--~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
....+++...+.+.-.. ....++.... ...+-...+.++++.+.+.+|-.+|+|+.|.++
T Consensus 249 VLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 249 VLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 44444333322221111 1111111110 011111246779999999999999999999875
No 396
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=3.1e-30 Score=243.38 Aligned_cols=207 Identities=24% Similarity=0.310 Sum_probs=166.4
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc-cchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCCCceEE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-GGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
.......||+|+||.|-+-++..+|+..|||.+..... +..++...|+++..+. ..|.+|.++|.... ....+
T Consensus 47 ~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~r-----egdvw 121 (282)
T KOG0984|consen 47 DLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFR-----EGDVW 121 (282)
T ss_pred hhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhc-----cccEE
Confidence 34445679999999999999999999999999965533 2346677788876554 79999999996432 36789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+.||.| ..||..+-++--.+ ...+++.-.-+||..+.+||.|||++. .++|||+||+|||++.+|+||+||||.+
T Consensus 122 IcME~M-~tSldkfy~~v~~~--g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIs 196 (282)
T KOG0984|consen 122 ICMELM-DTSLDKFYRKVLKK--GGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGIS 196 (282)
T ss_pred EeHHHh-hhhHHHHHHHHHhc--CCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccc
Confidence 999999 45887776542221 124888899999999999999999986 8999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccCC----CCCCCcccchHHHHHHHHHHhCCCCCcccccCC
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG----GEASMRGGVYSYGILLLEIFTRRRPTESMFNEG 927 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~ 927 (1009)
-.+.++- ..+-..|...|||||.+.. ..|+.++||||+|+.+.||.+++.||+.+...-
T Consensus 197 G~L~dSi---------Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF 259 (282)
T KOG0984|consen 197 GYLVDSI---------AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPF 259 (282)
T ss_pred eeehhhh---------HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHH
Confidence 8776531 1222457889999998644 478999999999999999999999998765543
No 397
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-29 Score=254.98 Aligned_cols=201 Identities=24% Similarity=0.340 Sum_probs=175.9
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecc---cccchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCCC
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLE---QKGGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~ 775 (1009)
.++|...++||+|+|+.|..++++.+.+.+|+|+++.+ +..+.+..+.|-.++.+. +||.+|-+..++ +.+
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscf-----qte 323 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCF-----QTE 323 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhh-----ccc
Confidence 46788999999999999999999999999999999754 334557788899998887 799999998874 445
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
...+.|.||+++|+|--.+++.+. ++++.+..+..+|+-||.|||++ |||.||+|.+|||+|..|++|++|
T Consensus 324 srlffvieyv~ggdlmfhmqrqrk------lpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltd 394 (593)
T KOG0695|consen 324 SRLFFVIEYVNGGDLMFHMQRQRK------LPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTD 394 (593)
T ss_pred ceEEEEEEEecCcceeeehhhhhc------CcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecc
Confidence 788999999999999666655443 99999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcc
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTES 922 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~ 922 (1009)
||+++.--. .......++||+.|+|||++.+..|+...|-|++||+++||+.|+.||+-
T Consensus 395 ygmcke~l~--------~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdi 453 (593)
T KOG0695|consen 395 YGMCKEGLG--------PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 453 (593)
T ss_pred cchhhcCCC--------CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcce
Confidence 999985322 22445568999999999999999999999999999999999999999974
No 398
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.7e-30 Score=274.82 Aligned_cols=200 Identities=26% Similarity=0.363 Sum_probs=175.1
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecc---cccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLE---QKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
.++..+..||-|+||.|-.++.+.....+|+|+++.. +....+.+..|-.+|...+.|.||+++-. |.+..+
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrT-----frd~ky 494 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRT-----FRDSKY 494 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHH-----hccchh
Confidence 3455567899999999999998755555888888533 23334567789999999999999999976 455689
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
.|+.||-|-||.++..++.+.. ++......++..+++|++|||++ +||+|||||+|.+++.+|-+|+.|||
T Consensus 495 vYmLmEaClGGElWTiLrdRg~------Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFG 565 (732)
T KOG0614|consen 495 VYMLMEACLGGELWTILRDRGS------FDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFG 565 (732)
T ss_pred hhhhHHhhcCchhhhhhhhcCC------cccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehh
Confidence 9999999999999999998875 88888999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCccc
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESM 923 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~ 923 (1009)
+|+.+..+ ....+++||+.|.|||++.+...+.++|.||+|+++||+++|.+||...
T Consensus 566 FAKki~~g---------~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~ 622 (732)
T KOG0614|consen 566 FAKKIGSG---------RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGV 622 (732)
T ss_pred hHHHhccC---------CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCC
Confidence 99988654 4556799999999999999999999999999999999999999999753
No 399
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=1e-28 Score=263.46 Aligned_cols=239 Identities=30% Similarity=0.386 Sum_probs=191.6
Q ss_pred CCceEEEEEEecCCeEEEEEEeecccccc-hHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEeccCCCCHH
Q 047768 713 SFGFVYKGVLHENGMLVAVKVINLEQKGG-SKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYEYMQNGSLE 791 (1009)
Q Consensus 713 ~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~ 791 (1009)
+||.||+|.+..+++.||+|++....... .+.+.+|++.+++++|+|++++++++... ...++++||+++++|.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDE-----DKLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeC-----CEEEEEEeCCCCCCHH
Confidence 58999999998889999999997654444 67899999999999999999999987643 6789999999999999
Q ss_pred HHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccCCCCCCCcc
Q 047768 792 EWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSASPLGNVV 871 (1009)
Q Consensus 792 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 871 (1009)
+++..... +++..++.++.+++.++.|||+. +++|+||+|+||+++.++.++++|||.+.......
T Consensus 76 ~~~~~~~~------~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~----- 141 (244)
T smart00220 76 DLLKKRGR------LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG----- 141 (244)
T ss_pred HHHHhccC------CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc-----
Confidence 99976542 78899999999999999999999 99999999999999999999999999998765431
Q ss_pred ccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchhhhccCCCCC
Q 047768 872 ETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKVMEIVDPSLL 951 (1009)
Q Consensus 872 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 951 (1009)
......++..|+|||......++.++||||+|+++|++++|..||..... ......... .....
T Consensus 142 ----~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~----~~~~~~~~~--------~~~~~ 205 (244)
T smart00220 142 ----LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ----LLELFKKIG--------KPKPP 205 (244)
T ss_pred ----ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc----HHHHHHHHh--------ccCCC
Confidence 22235678899999999888899999999999999999999999864211 111111100 00000
Q ss_pred ChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 952 PLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 952 ~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.... ......++.+++.+|+..+|++||++.++++
T Consensus 206 ~~~~---------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 206 FPPP---------EWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred Cccc---------cccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 0000 0003356889999999999999999999986
No 400
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=1.9e-28 Score=280.26 Aligned_cols=213 Identities=19% Similarity=0.270 Sum_probs=156.6
Q ss_pred HhccCccCCcccccCCceEEEEEEe----------------cCCeEEEEEEeecccccch--------------HHHHHH
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLH----------------ENGMLVAVKVINLEQKGGS--------------KSFAAE 748 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~----------------~~~~~vavK~~~~~~~~~~--------------~~~~~E 748 (1009)
..++|.+.++||+|+||+||+|.+. ..++.||||+++....... +....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 4678999999999999999999752 2456799999865432222 233457
Q ss_pred HHHHHhcCCCCc-----ceEEeeeecccc---CCCceEEEEEeccCCCCHHHHHhccCCCC------------------C
Q 047768 749 CEALRSIRHRNL-----IKIVTICSSIDF---KGVDFKALVYEYMQNGSLEEWLHQRDDQL------------------G 802 (1009)
Q Consensus 749 ~~~l~~l~h~ni-----v~l~~~~~~~~~---~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------------------~ 802 (1009)
+.++.+++|.++ ++++++|..... ......++||||+++++|.++++...... .
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766554 677787764211 12346799999999999999997532110 1
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccCCCCCCCccccCCccccccc
Q 047768 803 ICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKG 882 (1009)
Q Consensus 803 ~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~g 882 (1009)
...+++..++.++.|++.|+.|+|+. +|+||||||+||+++.++.+||+|||+++....... .......+
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~-------~~~~~g~~ 372 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN-------FNPLYGML 372 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCc-------cCccccCC
Confidence 12356788899999999999999998 999999999999999999999999999976543211 11112234
Q ss_pred cccccCccccCCCCC----------------------CCcccchHHHHHHHHHHhCCC-CCc
Q 047768 883 TIGYVAPEYGLGGEA----------------------SMRGGVYSYGILLLEIFTRRR-PTE 921 (1009)
Q Consensus 883 t~~y~aPE~~~~~~~----------------------~~~~DvwS~Gvvl~elltg~~-p~~ 921 (1009)
|+.|+|||.+..... ..+.||||+||+++||++|.. ||.
T Consensus 373 tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~ 434 (507)
T PLN03224 373 DPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVA 434 (507)
T ss_pred CcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCcc
Confidence 789999998754321 134699999999999999875 664
No 401
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=2.9e-29 Score=282.08 Aligned_cols=245 Identities=27% Similarity=0.333 Sum_probs=184.5
Q ss_pred CCcccccCCc-eEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCCCceEEEEEe
Q 047768 706 SNTIGRGSFG-FVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKGVDFKALVYE 783 (1009)
Q Consensus 706 ~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~e 783 (1009)
.+.+|.|+.| .||+|.. .|+.||||++-. +..+..++||+.++.- +|||||++++... +..+.|++.|
T Consensus 514 ~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E~-----d~qF~YIalE 583 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVY--EGREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSEQ-----DRQFLYIALE 583 (903)
T ss_pred HHHcccCCCCcEEEEEee--CCceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeecc-----CCceEEEEeh
Confidence 3568899887 5799998 489999998732 2345678999999888 6999999998743 4478999999
Q ss_pred ccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCC---C--CceEEecccc
Q 047768 784 YMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDH---D--MVAHVSDFGL 858 (1009)
Q Consensus 784 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~---~--~~~kl~DfGl 858 (1009)
.| ..+|.++++..... .........+.+..|+++|+++||+. +||||||||.||||+. + ..++|+|||+
T Consensus 584 LC-~~sL~dlie~~~~d--~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfgl 657 (903)
T KOG1027|consen 584 LC-ACSLQDLIESSGLD--VEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGL 657 (903)
T ss_pred Hh-hhhHHHHHhccccc--hhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEeccccc
Confidence 99 56999999884111 11111145678899999999999997 9999999999999976 3 4799999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhC-CCCCcccccCCccHHHHHHHh
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTR-RRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg-~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
++.+..+.. .-....+..||-+|+|||++....-+.++||||+|||+|+.++| ..||+.....+ ....
T Consensus 658 sKkl~~~~s-----S~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~------~NIl 726 (903)
T KOG1027|consen 658 SKKLAGGKS-----SFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ------ANIL 726 (903)
T ss_pred ccccCCCcc-----hhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh------hhhh
Confidence 998876532 11234567899999999999999889999999999999999994 99998532211 1100
Q ss_pred ccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 938 LPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 938 ~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.....+.. +.+ ..+| +..+++.++++.||..||+|.+|+.
T Consensus 727 --~~~~~L~~--L~~------------~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 727 --TGNYTLVH--LEP------------LPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred --cCccceee--ecc------------CchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 00111110 000 1122 5679999999999999999999973
No 402
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.5e-30 Score=251.44 Aligned_cols=203 Identities=24% Similarity=0.336 Sum_probs=164.4
Q ss_pred CccCCcccccCCceEEEEEEecCCeEEEEEEeecc--cccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEE
Q 047768 703 FSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLE--QKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKAL 780 (1009)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 780 (1009)
.+-.+.||.|+||+||.+.+..+|+.||+|++..- .-...+.+-+|++++..++|.|++..+++-......--.+.|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 34457899999999999999999999999988422 1224578889999999999999999987744321111235678
Q ss_pred EEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 781 VYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 781 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
++|.| ..+|.+.+-.-. .++...++-+..||++||.|||+. +|.||||||.|.|++.+...||||||+|+
T Consensus 135 ~TELm-QSDLHKIIVSPQ------~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLAR 204 (449)
T KOG0664|consen 135 LTELM-QSDLHKIIVSPQ------ALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLAR 204 (449)
T ss_pred HHHHH-HhhhhheeccCC------CCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEeccccccc
Confidence 88888 457877775533 488888999999999999999999 99999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcc
Q 047768 861 FLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTES 922 (1009)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~ 922 (1009)
...... ....+..+-|..|+|||.+.+. .|+.+.||||.||++.|++.++.-|..
T Consensus 205 vee~d~-------~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQA 260 (449)
T KOG0664|consen 205 TWDQRD-------RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQA 260 (449)
T ss_pred ccchhh-------hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhc
Confidence 765432 1233345678899999998885 689999999999999999998887754
No 403
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=4.2e-29 Score=268.63 Aligned_cols=199 Identities=25% Similarity=0.394 Sum_probs=173.0
Q ss_pred HhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc--------cchHHHHHHHHHHHhcC---CCCcceEEeee
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK--------GGSKSFAAECEALRSIR---HRNLIKIVTIC 767 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~---h~niv~l~~~~ 767 (1009)
...+|+..+.+|+|+||.|+.|.++++...|+||.+..+.- ..-....-||++|..++ |+||+++++++
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF 638 (772)
T ss_pred ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence 34578999999999999999999999999999999854321 11124667999999997 99999999995
Q ss_pred eccccCCCceEEEEEeccC-CCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeC
Q 047768 768 SSIDFKGVDFKALVYEYMQ-NGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLD 846 (1009)
Q Consensus 768 ~~~~~~~~~~~~lv~e~~~-~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~ 846 (1009)
++.+++|++||-.. +.+|.+++..++. +++.+++.|++|++.|+++||+. +|||||||-+||.++
T Consensus 639 -----Eddd~yyl~te~hg~gIDLFd~IE~kp~------m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd 704 (772)
T KOG1152|consen 639 -----EDDDYYYLETEVHGEGIDLFDFIEFKPR------MDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVD 704 (772)
T ss_pred -----ecCCeeEEEecCCCCCcchhhhhhccCc------cchHHHHHHHHHHHhcccccccc---CceecccccccEEEe
Confidence 44588999999874 4599999988764 99999999999999999999999 999999999999999
Q ss_pred CCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCC-CCcccchHHHHHHHHHHhCCCCCc
Q 047768 847 HDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEA-SMRGGVYSYGILLLEIFTRRRPTE 921 (1009)
Q Consensus 847 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~elltg~~p~~ 921 (1009)
.+|-+|++|||.|.....++. ..++||..|.|||++.+..| +..-|||++|+++|-++....||.
T Consensus 705 ~~g~~klidfgsaa~~ksgpf----------d~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 705 SNGFVKLIDFGSAAYTKSGPF----------DVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred cCCeEEEeeccchhhhcCCCc----------ceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999999999999987765432 24789999999999999988 777899999999999999999985
No 404
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=5.6e-28 Score=255.80 Aligned_cols=137 Identities=25% Similarity=0.394 Sum_probs=117.6
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcC--------CCCcceEEeeeecccc
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIR--------HRNLIKIVTICSSIDF 772 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~~~~~ 772 (1009)
.+|.+.++||-|.|++||+|.+..+.+.||+|+.+... .-.+....||++|++++ ..+||++++.+... -
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs-G 155 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS-G 155 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec-C
Confidence 68999999999999999999999999999999986442 23456678999999983 35789999887654 4
Q ss_pred CCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeC
Q 047768 773 KGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLD 846 (1009)
Q Consensus 773 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~ 846 (1009)
..+.+.|||+|++ |.+|..++.....+ .++...++.|++|++.||.|||.+| +|||-||||+|||+.
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~Yr----Glpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNYR----GLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCCC----CCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 5678999999999 77999999876543 4999999999999999999999998 999999999999994
No 405
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=2.9e-28 Score=263.71 Aligned_cols=212 Identities=23% Similarity=0.291 Sum_probs=174.9
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc---ccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCce
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ---KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDF 777 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 777 (1009)
.-|..++.||-|+||+|.+++..++...+|.|.++..+ .......++|-+||...+.+-||+++-. |.+.+.
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyyS-----FQDkdn 703 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYS-----FQDKDN 703 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEE-----eccCCc
Confidence 34667789999999999999998888999999986443 2234567889999999999999999865 556689
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccc
Q 047768 778 KALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 778 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfG 857 (1009)
+|.||+|++||++-++|-+.+- +.+.-+..++.++..|+++.|.. |+|||||||+|||||.+|++||+|||
T Consensus 704 LYFVMdYIPGGDmMSLLIrmgI------FeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFG 774 (1034)
T KOG0608|consen 704 LYFVMDYIPGGDMMSLLIRMGI------FEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFG 774 (1034)
T ss_pred eEEEEeccCCccHHHHHHHhcc------CHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeecc
Confidence 9999999999999999988763 78888888999999999999999 99999999999999999999999999
Q ss_pred cccccC---CCCCCCcc--------c-----------------------cCCccccccccccccCccccCCCCCCCcccc
Q 047768 858 LAKFLS---ASPLGNVV--------E-----------------------TPSSSIGVKGTIGYVAPEYGLGGEASMRGGV 903 (1009)
Q Consensus 858 la~~~~---~~~~~~~~--------~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv 903 (1009)
++.-+. .++++... + ........+||+.|+|||++....|+..+|.
T Consensus 775 LCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdw 854 (1034)
T KOG0608|consen 775 LCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDW 854 (1034)
T ss_pred ccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchh
Confidence 986431 11111100 0 0011123569999999999999999999999
Q ss_pred hHHHHHHHHHHhCCCCCcccccC
Q 047768 904 YSYGILLLEIFTRRRPTESMFNE 926 (1009)
Q Consensus 904 wS~Gvvl~elltg~~p~~~~~~~ 926 (1009)
||.|||||||+.|+.||......
T Consensus 855 ws~gvil~em~~g~~pf~~~tp~ 877 (1034)
T KOG0608|consen 855 WSVGVILYEMLVGQPPFLADTPG 877 (1034)
T ss_pred hHhhHHHHHHhhCCCCccCCCCC
Confidence 99999999999999999764443
No 406
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.95 E-value=4.3e-29 Score=257.67 Aligned_cols=404 Identities=21% Similarity=0.260 Sum_probs=254.5
Q ss_pred CcCeEeecCccCCCCCCcccCCccccceeecccCcccCCCCcccccccccccccccC-ccCCCCCCCcccCCChHHHHHh
Q 047768 169 NLQGLSVGDNQLTGQLPASIGNLSALRVIDIRTNRLWGKIPITLSQLTSLAYLHVGD-NHFSGTIPPSVYNISSLVEIYL 247 (1009)
Q Consensus 169 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L 247 (1009)
+-.+++|..|+|+.+.|.+|+.+++|++||||+|+|+.+-|++|.+|.+|..|-+-+ |+|+..-...|.+|.+|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 447789999999977788999999999999999999999999999999988776655 9999655567899999999999
Q ss_pred hCCccCCCCChhhccCCCcccceeccccccCCCCCCCcCcccccccccccccc------------ccccccccccccccc
Q 047768 248 YGNRFTGSLPIEIGKNLPNLRNFVIYTNNFTGSLPDSFSNASNLEVLHLAENQ------------FRGQVSINFNGLKDL 315 (1009)
Q Consensus 248 ~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~------------l~~~~~~~f~~l~~L 315 (1009)
.-|++. .++...+..+++|..|.+..|.+..+--.+|..+.+++.+++..|. +....+..|++..-.
T Consensus 148 Nan~i~-Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~ 226 (498)
T KOG4237|consen 148 NANHIN-CIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCV 226 (498)
T ss_pred Chhhhc-chhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceec
Confidence 999999 9999999999999999999999996666699999999999999998 333445556666666
Q ss_pred ccccccccccCCCCCCCcchhhhcccccccceEEccCCCCCCcCch-hhhhhcccceEEEcCCCccccCCCccccCcCcc
Q 047768 316 SMLGLATNFLGNGAANDLDFVDLLTNCTKLQYLYLADNGFGGVLPH-SIANLSTALIDFNLGKNQIYGTIPPGIANLVNL 394 (1009)
Q Consensus 316 ~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L 394 (1009)
....+.++++....+..+. ..+..+..-..+.....++.|. .|..+ .+|+.|+|++|+|+++-+.+|.++..+
T Consensus 227 ~p~rl~~~Ri~q~~a~kf~-----c~~esl~s~~~~~d~~d~~cP~~cf~~L-~~L~~lnlsnN~i~~i~~~aFe~~a~l 300 (498)
T KOG4237|consen 227 SPYRLYYKRINQEDARKFL-----CSLESLPSRLSSEDFPDSICPAKCFKKL-PNLRKLNLSNNKITRIEDGAFEGAAEL 300 (498)
T ss_pred chHHHHHHHhcccchhhhh-----hhHHhHHHhhccccCcCCcChHHHHhhc-ccceEeccCCCccchhhhhhhcchhhh
Confidence 6666677776665553221 1111221111222222223333 23333 455555555555555555555555555
Q ss_pred CEEEccCCCCCCCCCCCcCCcccccceecccccccCCCCcccccccccccccccCcccccccCCCCCCCCCccccccCCC
Q 047768 395 NSLRMEANRLTGTIPHVIGELKNLQLLHLHANFLQGTIPSSLGNLTLLTYLSFGANNLQGNIPFSLGNCKNLMFFFAPRN 474 (1009)
Q Consensus 395 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N 474 (1009)
+.|.|..|+|...-...|.++..|+.|+|.+|+|+...|..|..+..|.+|+|-.|.+.-. +.+..|.. ++..+
T Consensus 301 ~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~Cn-----C~l~wl~~-Wlr~~ 374 (498)
T KOG4237|consen 301 QELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCN-----CRLAWLGE-WLRKK 374 (498)
T ss_pred hhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCc-----cchHHHHH-HHhhC
Confidence 5555555555544455555555555555555555555555555555555555555544310 00000000 12222
Q ss_pred CccCCCchhhhhhccceeeEecCCCccCC---CCCCCcc---------CCCCCCe-eeccccccCCCccccccCCCCccE
Q 047768 475 KLTGALPQQILEITTLSLSLDLSDNLLNG---SLPLGVG---------NLKSLVR-LGIARNQFSGQIPVTLGACTSLEY 541 (1009)
Q Consensus 475 ~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~---~~p~~~~---------~l~~L~~-L~ls~N~l~~~~p~~~~~l~~L~~ 541 (1009)
.-+|..|-+- ......++++++.+.. .-|++.+ ..+-+.+ ..-|++.++ .+|.-+. ..-..
T Consensus 375 ~~~~~~~Cq~---p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk-~lp~~iP--~d~te 448 (498)
T KOG4237|consen 375 SVVGNPRCQS---PGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLK-LLPRGIP--VDVTE 448 (498)
T ss_pred CCCCCCCCCC---CchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchh-hcCCCCC--chhHH
Confidence 2222222110 0111124555544431 1222211 1222322 233444443 4554442 24567
Q ss_pred EEecCcccccccccccccccccceEcCCCcccccccccccccccccCceecccc
Q 047768 542 VELQGNSFSGTIPQSLSSLTSIKELDLSQNNFSGQIPKYLENLSFLQYLNLSYN 595 (1009)
Q Consensus 542 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N 595 (1009)
|+|.+|.++ .+|.. .+..| .+|||+|+++..---.|.++++|.+|-+|+|
T Consensus 449 lyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 449 LYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred Hhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 888888888 67766 66777 8899999888665667888888888888876
No 407
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94 E-value=4.5e-27 Score=246.69 Aligned_cols=280 Identities=26% Similarity=0.341 Sum_probs=205.2
Q ss_pred HHhccCccCCcccccCCceEEEEEEec---CCeEEEEEEeecccccchHHHHHHHHHHHhc-CCCCcceEEeeeeccccC
Q 047768 698 KATNEFSSSNTIGRGSFGFVYKGVLHE---NGMLVAVKVINLEQKGGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFK 773 (1009)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 773 (1009)
...+.|..+++||+|.|++||+|.+.. .++.||+|.+... .....+..|+++|..+ .+.||+++.++ +.
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t--s~p~ri~~El~~L~~~gG~~ni~~~~~~-----~r 105 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT--SSPSRILNELEMLYRLGGSDNIIKLNGC-----FR 105 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc--cCchHHHHHHHHHHHhccchhhhcchhh-----hc
Confidence 345678899999999999999999986 6789999988543 3467899999999999 59999999988 44
Q ss_pred CCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCC-CceE
Q 047768 774 GVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAH 852 (1009)
Q Consensus 774 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~-~~~k 852 (1009)
..+...+|+||+++..-.++... ++..++..+.+.+..||+++|.. |||||||||.|++.+.. +.-.
T Consensus 106 nnd~v~ivlp~~~H~~f~~l~~~---------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~ 173 (418)
T KOG1167|consen 106 NNDQVAIVLPYFEHDRFRDLYRS---------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGV 173 (418)
T ss_pred cCCeeEEEecccCccCHHHHHhc---------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCce
Confidence 55889999999999999888765 77889999999999999999999 99999999999999754 6788
Q ss_pred EeccccccccCCCC------C----------C------------------C--ccccCCccccccccccccCccccCCC-
Q 047768 853 VSDFGLAKFLSASP------L----------G------------------N--VVETPSSSIGVKGTIGYVAPEYGLGG- 895 (1009)
Q Consensus 853 l~DfGla~~~~~~~------~----------~------------------~--~~~~~~~~~~~~gt~~y~aPE~~~~~- 895 (1009)
|+|||+|....... . + . ....+.......||++|.|||++...
T Consensus 174 LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~ 253 (418)
T KOG1167|consen 174 LVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCP 253 (418)
T ss_pred EEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhcc
Confidence 99999998321100 0 0 0 00011122235699999999998775
Q ss_pred CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchhhh---ccCC--CCC-----Chhhh---------
Q 047768 896 EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKVME---IVDP--SLL-----PLEEE--------- 956 (1009)
Q Consensus 896 ~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~d~--~l~-----~~~~~--------- 956 (1009)
.-+++.||||.||++.-+++++.||....++...+.+.+.-..+..++. ..+. .+. ..++.
T Consensus 254 ~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~ 333 (418)
T KOG1167|consen 254 RQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHI 333 (418)
T ss_pred CcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccCh
Confidence 4589999999999999999999999876666555555543222211111 1111 000 00110
Q ss_pred ------hh--hccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 957 ------RT--NSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 957 ------r~--~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
+. ..........+..++++..+|+..||.+|.|++|++..
T Consensus 334 ~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 334 ESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred hhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 00 01111111223368899999999999999999998753
No 408
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.94 E-value=2.5e-28 Score=267.15 Aligned_cols=254 Identities=22% Similarity=0.306 Sum_probs=203.6
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
.++|...+++|.|.||.||+|+++.+++..|||+++.+.....+..++|+-+++..+||||+.++|.+.. .+..+
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr-----~dklw 88 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLR-----RDKLW 88 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhh-----hcCcE
Confidence 3578889999999999999999999999999999999888888889999999999999999999997654 36789
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
++||||.+|+|.+.-+-.. ++++.++..++++..+|++|||+. +=+|||||-.||++++.|.+|++|||.+
T Consensus 89 icMEycgggslQdiy~~Tg------plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvs 159 (829)
T KOG0576|consen 89 ICMEYCGGGSLQDIYHVTG------PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVS 159 (829)
T ss_pred EEEEecCCCcccceeeecc------cchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCch
Confidence 9999999999999876654 389999999999999999999999 8899999999999999999999999998
Q ss_pred cccCCCCCCCccccCCccccccccccccCcccc---CCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHH
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYG---LGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKR 936 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 936 (1009)
-.+... -..+..+.||+.|||||+. ..+.|...+|||+.|+...|+---+.|...... ++.
T Consensus 160 aqitat--------i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp----mr~---- 223 (829)
T KOG0576|consen 160 AQITAT--------IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP----MRA---- 223 (829)
T ss_pred hhhhhh--------hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch----HHH----
Confidence 766542 2455668999999999974 456789999999999999998776666432110 000
Q ss_pred hccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 937 ALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 937 ~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.-+..+.....+.. -....|.+.+-++++.|+..+|++||++..++.
T Consensus 224 ------l~LmTkS~~qpp~l------kDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 224 ------LFLMTKSGFQPPTL------KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred ------HHHhhccCCCCCcc------cCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 01111111111100 011234556778999999999999999987654
No 409
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.94 E-value=2.6e-27 Score=238.86 Aligned_cols=268 Identities=21% Similarity=0.227 Sum_probs=198.3
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecc--cccchHHHHHHHHHHHhcCCCCcceEEeeeecccc-CCCc
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLE--QKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDF-KGVD 776 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~~ 776 (1009)
..+|.-.+.+|.|.- .|..|.+.-.+++||+|+...+ ...+.++..+|...+..++|+|+++++.+++.... ....
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 356777788999988 7888888888999999988543 23345778899999999999999999998775432 2234
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
..|+|||+| .++|...++.. ++-..+..+..|++.|+.|||+. +|+||||||+||++..+..+||.||
T Consensus 95 e~y~v~e~m-~~nl~~vi~~e--------lDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~df 162 (369)
T KOG0665|consen 95 EVYLVMELM-DANLCQVILME--------LDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDF 162 (369)
T ss_pred hHHHHHHhh-hhHHHHHHHHh--------cchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccc
Confidence 678999999 56999988842 67788999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHH
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKR 936 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 936 (1009)
|+|+.-... -..+..+.|..|.|||++.+..+.+.+||||.||++.||++|+.-|.. ...+..|.+.
T Consensus 163 g~ar~e~~~---------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g----~d~idQ~~ki 229 (369)
T KOG0665|consen 163 GLARTEDTD---------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPG----KDHIDQWNKI 229 (369)
T ss_pred hhhcccCcc---------cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecC----chHHHHHHHH
Confidence 999854432 234457789999999999999999999999999999999999987763 2233333221
Q ss_pred h-------------ccchhhhccC----------CCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 047768 937 A-------------LPEKVMEIVD----------PSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDV 993 (1009)
Q Consensus 937 ~-------------~~~~~~~~~d----------~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~ev 993 (1009)
. +.+-.+..+. ....++-.-+...+.. .-......+++.+++-.+|++|.+++++
T Consensus 230 ~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~--~~~~~~ardll~~MLvi~pe~Risv~da 307 (369)
T KOG0665|consen 230 IEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGS--KLDCSLARDLLSKMLVIDPEKRISVDDA 307 (369)
T ss_pred HHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCC--ccchHHHHHHHHHhhccChhhcccHHHH
Confidence 1 0011111111 0000000000001111 1122345688999999999999999999
Q ss_pred HH
Q 047768 994 VV 995 (1009)
Q Consensus 994 l~ 995 (1009)
++
T Consensus 308 L~ 309 (369)
T KOG0665|consen 308 LR 309 (369)
T ss_pred hc
Confidence 75
No 410
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=4.4e-27 Score=231.01 Aligned_cols=253 Identities=17% Similarity=0.243 Sum_probs=186.9
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCCCceE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
.+.|++.+.+|+|.||.+-.++++.+.+.+|+|.+..+. ...++|.+|...--.+ .|.||+.-+++ .|+..+.+
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~v----aFqt~d~Y 97 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEV----AFQTSDAY 97 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHH----HhhcCceE
Confidence 347899999999999999999999999999999986443 2467888887654444 58999887765 36667888
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeC--CCCceEEecc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLD--HDMVAHVSDF 856 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~--~~~~~kl~Df 856 (1009)
+.++||++.|+|.+-+...+ +.+.-.+.++.|+++|+.|||++ .+||||||.+||||- +...||+|||
T Consensus 98 vF~qE~aP~gdL~snv~~~G-------igE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDF 167 (378)
T KOG1345|consen 98 VFVQEFAPRGDLRSNVEAAG-------IGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDF 167 (378)
T ss_pred EEeeccCccchhhhhcCccc-------ccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeec
Confidence 99999999999999887654 77888999999999999999999 999999999999993 3348999999
Q ss_pred ccccccCCCCCCCccccCCccccccccccccCccccCC---C--CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHH
Q 047768 857 GLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG---G--EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLH 931 (1009)
Q Consensus 857 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~--~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~ 931 (1009)
|..+..+.. .....-+..|.|||.... + ...+.+|||.||+++|..+||+.||......+..+.
T Consensus 168 G~t~k~g~t-----------V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~ 236 (378)
T KOG1345|consen 168 GLTRKVGTT-----------VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYW 236 (378)
T ss_pred ccccccCce-----------ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHH
Confidence 998855431 112233567999996433 2 347889999999999999999999986555566666
Q ss_pred HHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 932 EFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 932 ~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
+|..-..+... .+-+ .. ....+..+++.++-+..+|++|=..-++.+
T Consensus 237 ~~~~w~~rk~~-~~P~-~F---------------~~fs~~a~r~Fkk~lt~~~~drcki~~~kk 283 (378)
T KOG1345|consen 237 EWEQWLKRKNP-ALPK-KF---------------NPFSEKALRLFKKSLTPRFKDRCKIWTAKK 283 (378)
T ss_pred HHHHHhcccCc-cCch-hh---------------cccCHHHHHHHHHhcCCcccccchhHHHHH
Confidence 65432111100 0000 00 011234556677778888888844444433
No 411
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=1.6e-25 Score=233.04 Aligned_cols=211 Identities=31% Similarity=0.497 Sum_probs=181.6
Q ss_pred ccccCCceEEEEEEecCCeEEEEEEeeccccc-chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEeccCC
Q 047768 709 IGRGSFGFVYKGVLHENGMLVAVKVINLEQKG-GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYEYMQN 787 (1009)
Q Consensus 709 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~ 787 (1009)
||+|.+|.||++....+++.+++|++...... ..+.+.+|++.++.++|++++++++++... ...++++||+++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDE-----NHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecC-----CeEEEEEecCCC
Confidence 68999999999999877999999999654332 246799999999999999999999987543 678999999999
Q ss_pred CCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCC-CCceEEeccccccccCCCC
Q 047768 788 GSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDH-DMVAHVSDFGLAKFLSASP 866 (1009)
Q Consensus 788 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~-~~~~kl~DfGla~~~~~~~ 866 (1009)
++|.+++..... .+++..+..++.++++++.|||+. +++|+||+|.||+++. ++.++++|||.+.......
T Consensus 76 ~~l~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~ 147 (215)
T cd00180 76 GSLKDLLKENEG-----KLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDK 147 (215)
T ss_pred CcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCc
Confidence 999999987532 388999999999999999999999 9999999999999999 8999999999998665431
Q ss_pred CCCccccCCccccccccccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchhhhc
Q 047768 867 LGNVVETPSSSIGVKGTIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKVMEI 945 (1009)
Q Consensus 867 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 945 (1009)
. ......+...|++||..... .++.++|+|++|++++++
T Consensus 148 ~--------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------- 187 (215)
T cd00180 148 S--------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------- 187 (215)
T ss_pred c--------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------
Confidence 1 12234567889999998887 888999999999999998
Q ss_pred cCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 946 VDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 946 ~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
.++.+++..|++.+|++||++.++++.
T Consensus 188 ------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ------------------------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ------------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 246799999999999999999999864
No 412
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.94 E-value=1.4e-27 Score=246.59 Aligned_cols=298 Identities=23% Similarity=0.254 Sum_probs=197.9
Q ss_pred CCCCCCC-CCc-cc--eeeCCCC---------CeEEEEEeecCCcccccCccccCCCCCCeeeecCCcCCccCCccccCc
Q 047768 51 SACVNLC-QHW-TG--VTCGRRN---------QRVTKLDLRNQSIGGILSPYVGNLSFLRYINIADNDFHGEIPDRIGNL 117 (1009)
Q Consensus 51 ~~~~~~c-~~w-~g--v~C~~~~---------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l 117 (1009)
..|+..| |+= .| |+|+..+ ...+.++|..|+|+.+.+.+|+.+.+||.||||+|+|+-+-|++|.+|
T Consensus 35 ~~CP~pC~Cs~~~g~~VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL 114 (498)
T KOG4237|consen 35 SACPAPCTCSDVEGGIVDCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGL 114 (498)
T ss_pred ccCCCCcccCCCCCceEEccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhh
Confidence 3566666 222 22 7887543 356777777777777777777777777777777777776777777777
Q ss_pred cccccccccc-cccCCCCCCCCcCCCcCcEEecccccccCCCchHHhhhccCCcCeEeecCccCCCCCCcccCCccccce
Q 047768 118 FRLETLVLAN-NSFSGRIPTNLSHCSKLITFSAHRNNLVGEIPEELISRRLFNLQGLSVGDNQLTGQLPASIGNLSALRV 196 (1009)
Q Consensus 118 ~~L~~L~Ls~-N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 196 (1009)
.+|.+|-|-+ |+|+...-..|++|..|+.|.+..|++.-...+.+ ..+++|..|.+.+|.+..+-..+|..+..++.
T Consensus 115 ~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al--~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~t 192 (498)
T KOG4237|consen 115 ASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDAL--RDLPSLSLLSLYDNKIQSICKGTFQGLAAIKT 192 (498)
T ss_pred HhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHH--HHhhhcchhcccchhhhhhccccccchhccch
Confidence 7766665544 77775545567777777777777777764333333 45777777777777777333346777777777
Q ss_pred eecccCc------------ccCCCCcccccccccccccccCccCCCCCCCcccC-CChHHHHHhhCCccCCCCChhhccC
Q 047768 197 IDIRTNR------------LWGKIPITLSQLTSLAYLHVGDNHFSGTIPPSVYN-ISSLVEIYLYGNRFTGSLPIEIGKN 263 (1009)
Q Consensus 197 L~L~~N~------------l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~L~~N~l~~~ip~~~~~~ 263 (1009)
+.+..|. +....|..++...-..-..+.++++...-+..|.. +.++.+=..+.+...+..|..-|+.
T Consensus 193 lhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~ 272 (498)
T KOG4237|consen 193 LHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKK 272 (498)
T ss_pred HhhhcCccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhh
Confidence 7777776 22334455555555555555555555333333321 2233333334444555777777888
Q ss_pred CCcccceeccccccCCCCCCCcCcccccccccccccccccccccccccccccccccccccccCCCCCCCcchhhhccccc
Q 047768 264 LPNLRNFVIYTNNFTGSLPDSFSNASNLEVLHLAENQFRGQVSINFNGLKDLSMLGLATNFLGNGAANDLDFVDLLTNCT 343 (1009)
Q Consensus 264 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~ 343 (1009)
|++|+.|+|++|+|+++-+.+|.++..++.|.|..|+|..+....|.++..|+.|+|..|+|+.+.. .+|..+.
T Consensus 273 L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~------~aF~~~~ 346 (498)
T KOG4237|consen 273 LPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAP------GAFQTLF 346 (498)
T ss_pred cccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEec------ccccccc
Confidence 8888888888888888888888888888888888888888877777777777777777777776554 4455666
Q ss_pred ccceEEccCCCCC
Q 047768 344 KLQYLYLADNGFG 356 (1009)
Q Consensus 344 ~L~~L~L~~N~l~ 356 (1009)
.|..|.|-.|.+.
T Consensus 347 ~l~~l~l~~Np~~ 359 (498)
T KOG4237|consen 347 SLSTLNLLSNPFN 359 (498)
T ss_pred eeeeeehccCccc
Confidence 6777777666654
No 413
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.93 E-value=1e-26 Score=246.99 Aligned_cols=204 Identities=23% Similarity=0.310 Sum_probs=170.0
Q ss_pred HHHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcC------CCCcceEEeeeecc
Q 047768 697 SKATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIR------HRNLIKIVTICSSI 770 (1009)
Q Consensus 697 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~~~~~~~ 770 (1009)
+....+|.+.-..|+|-|++|..|.+...|..||||++...... .+.=.+|+++|++++ ..|+++++..
T Consensus 428 E~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~---- 502 (752)
T KOG0670|consen 428 ELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFHCLRLFRH---- 502 (752)
T ss_pred hhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhHHHHHHHH----
Confidence 34567899999999999999999999988899999999644332 344567999999984 4567777765
Q ss_pred ccCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCC-
Q 047768 771 DFKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDM- 849 (1009)
Q Consensus 771 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~- 849 (1009)
|....++|+|+|-+ .-+|.+++++.+... .+....+..++.|+.-||..|... +|+|.||||+||||++..
T Consensus 503 -F~hknHLClVFE~L-slNLRevLKKyG~nv---GL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~ 574 (752)
T KOG0670|consen 503 -FKHKNHLCLVFEPL-SLNLREVLKKYGRNV---GLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKN 574 (752)
T ss_pred -hhhcceeEEEehhh-hchHHHHHHHhCccc---ceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcc
Confidence 44458999999988 679999999877653 388889999999999999999987 999999999999998764
Q ss_pred ceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCccc
Q 047768 850 VAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESM 923 (1009)
Q Consensus 850 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~ 923 (1009)
.+||||||.|........ +.+.-+..|.|||++.+-+|+...|+||.||.|||+.||+..|+..
T Consensus 575 iLKLCDfGSA~~~~enei----------tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~ 638 (752)
T KOG0670|consen 575 ILKLCDFGSASFASENEI----------TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR 638 (752)
T ss_pred eeeeccCccccccccccc----------cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCC
Confidence 689999999987765322 1233456799999999999999999999999999999999988753
No 414
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=4.8e-25 Score=232.22 Aligned_cols=200 Identities=33% Similarity=0.497 Sum_probs=171.8
Q ss_pred CccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc-chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEE
Q 047768 703 FSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG-GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALV 781 (1009)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 781 (1009)
|.+.+.||+|++|.||+|....+++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++... ...+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-----~~~~~v 75 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDP-----EPLYLV 75 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecC-----CceEEE
Confidence 55678899999999999999877899999999755443 467889999999999999999999986543 678899
Q ss_pred EeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccc
Q 047768 782 YEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 861 (1009)
Q Consensus 782 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~ 861 (1009)
+||+++++|.+++...... +++.....++.+++.++.|||+. +++|+|++|+||+++.++.++++|||.+..
T Consensus 76 ~e~~~~~~L~~~~~~~~~~-----~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~ 147 (225)
T smart00221 76 MEYCEGGDLFDYLRKKGGK-----LSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARF 147 (225)
T ss_pred EeccCCCCHHHHHHhcccC-----CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeE
Confidence 9999999999999875432 78899999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCCccccCCccccccccccccCcccc-CCCCCCCcccchHHHHHHHHHHhCCCCCcc
Q 047768 862 LSASPLGNVVETPSSSIGVKGTIGYVAPEYG-LGGEASMRGGVYSYGILLLEIFTRRRPTES 922 (1009)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwS~Gvvl~elltg~~p~~~ 922 (1009)
...... .......++..|++||.. ....++.++|||+||++++||++|+.||..
T Consensus 148 ~~~~~~-------~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 148 IHRDLA-------ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ecCccc-------ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 654320 012234577889999998 667788899999999999999999999964
No 415
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=2.3e-23 Score=266.41 Aligned_cols=363 Identities=19% Similarity=0.266 Sum_probs=225.5
Q ss_pred CCeEEEEEeecCCccc--ccCccccCCCCCCeeeecCCc------CCccCCccccCcc-ccccccccccccCCCCCCCCc
Q 047768 69 NQRVTKLDLRNQSIGG--ILSPYVGNLSFLRYINIADND------FHGEIPDRIGNLF-RLETLVLANNSFSGRIPTNLS 139 (1009)
Q Consensus 69 ~~~v~~l~l~~~~l~~--~~~~~~~~l~~L~~L~L~~n~------~~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~ 139 (1009)
+.+|..+.|.-..+.. ..+.+|..+.+|++|.+..+. +...+|+.|..++ +|+.|++++|.+. .+|..|
T Consensus 531 ~~~v~~i~l~~~~~~~~~i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f- 608 (1153)
T PLN03210 531 TKKVLGITLDIDEIDELHIHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF- 608 (1153)
T ss_pred cceeeEEEeccCccceeeecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-
Confidence 3456665554333322 223457889999999887653 3445777777764 5888888888876 677776
Q ss_pred CCCcCcEEecccccccCCCchHHhhhccCCcCeEeecCccCCCCCCcccCCccccceeecccCcccCCCCcccccccccc
Q 047768 140 HCSKLITFSAHRNNLVGEIPEELISRRLFNLQGLSVGDNQLTGQLPASIGNLSALRVIDIRTNRLWGKIPITLSQLTSLA 219 (1009)
Q Consensus 140 ~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 219 (1009)
...+|+.|++++|++. .+|..+ ..+.+|+.|+|++|...+.+|. ++.+++|++|+|++|.....+|..+..+++|+
T Consensus 609 ~~~~L~~L~L~~s~l~-~L~~~~--~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~ 684 (1153)
T PLN03210 609 RPENLVKLQMQGSKLE-KLWDGV--HSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLE 684 (1153)
T ss_pred CccCCcEEECcCcccc-cccccc--ccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCC
Confidence 4677888888877765 455544 4566777777776654445553 66677777777777665566677777777777
Q ss_pred cccccCccCCCCCCCcccCCChHHHHHhhCCccCCCCChhhccCCCcccceeccccccCCCCCCCcCccccccccccccc
Q 047768 220 YLHVGDNHFSGTIPPSVYNISSLVEIYLYGNRFTGSLPIEIGKNLPNLRNFVIYTNNFTGSLPDSFSNASNLEVLHLAEN 299 (1009)
Q Consensus 220 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 299 (1009)
.|++++|...+.+|..+ ++++|+.|++++|...+.+|.. ..+|+.|+|++|.+. .+|..+ .+++|++|++.++
T Consensus 685 ~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~----~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~ 757 (1153)
T PLN03210 685 DLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI----STNISWLDLDETAIE-EFPSNL-RLENLDELILCEM 757 (1153)
T ss_pred EEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc----cCCcCeeecCCCccc-cccccc-ccccccccccccc
Confidence 77777654434555544 5666666666666544344421 345556666666554 233333 3455555555443
Q ss_pred ccccccccccccccccccccccccccCCCCCCCcchhhhcccccccceEEccCCCCCCcCchhhhhhcccceEEEcCCCc
Q 047768 300 QFRGQVSINFNGLKDLSMLGLATNFLGNGAANDLDFVDLLTNCTKLQYLYLADNGFGGVLPHSIANLSTALIDFNLGKNQ 379 (1009)
Q Consensus 300 ~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~ 379 (1009)
....... .+.... +......++|+.|+|++|...+.+|..+.++ +.|+.|++++|.
T Consensus 758 ~~~~l~~-----------------~~~~l~------~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L-~~L~~L~Ls~C~ 813 (1153)
T PLN03210 758 KSEKLWE-----------------RVQPLT------PLMTMLSPSLTRLFLSDIPSLVELPSSIQNL-HKLEHLEIENCI 813 (1153)
T ss_pred chhhccc-----------------cccccc------hhhhhccccchheeCCCCCCccccChhhhCC-CCCCEEECCCCC
Confidence 3211100 000000 0011234677888888887776777777776 567888887765
Q ss_pred cccCCCccccCcCccCEEEccCCCCCCCCCCCcCCcccccceecccccccCCCCcccccccccccccccC-cccccccCC
Q 047768 380 IYGTIPPGIANLVNLNSLRMEANRLTGTIPHVIGELKNLQLLHLHANFLQGTIPSSLGNLTLLTYLSFGA-NNLQGNIPF 458 (1009)
Q Consensus 380 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~ 458 (1009)
..+.+|..+ ++++|+.|+|++|..-..+|.. ..+|++|+|++|.++ .+|.++..+++|++|++++ |++. .+|.
T Consensus 814 ~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~ 887 (1153)
T PLN03210 814 NLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSL 887 (1153)
T ss_pred CcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCc
Confidence 444666655 6778888888877654455543 356777888888877 5677777788888888877 4444 5666
Q ss_pred CCCCCCCccccccCCC
Q 047768 459 SLGNCKNLMFFFAPRN 474 (1009)
Q Consensus 459 ~~~~l~~L~~l~l~~N 474 (1009)
.+..+++|+.++++++
T Consensus 888 ~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 888 NISKLKHLETVDFSDC 903 (1153)
T ss_pred ccccccCCCeeecCCC
Confidence 6777777776666555
No 416
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=1.8e-23 Score=267.36 Aligned_cols=344 Identities=20% Similarity=0.240 Sum_probs=165.3
Q ss_pred CcccCCccccceeecccCc------ccCCCCccccccc-ccccccccCccCCCCCCCcccCCChHHHHHhhCCccCCCCC
Q 047768 185 PASIGNLSALRVIDIRTNR------LWGKIPITLSQLT-SLAYLHVGDNHFSGTIPPSVYNISSLVEIYLYGNRFTGSLP 257 (1009)
Q Consensus 185 p~~~~~l~~L~~L~L~~N~------l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip 257 (1009)
+.+|.++++|+.|.+..+. +...+|..|..++ +|+.|++.+|.+. .+|..| .+.+|++|+|.+|++. .+|
T Consensus 551 ~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~ 627 (1153)
T PLN03210 551 ENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLW 627 (1153)
T ss_pred HHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccc
Confidence 3456667777777765543 2234555555553 4777777776665 556655 3566666777776666 555
Q ss_pred hhhccCCCcccceeccccccCCCCCCCcCccccccccccccccccccccccccccccccccccccc-ccCCCCCCCcchh
Q 047768 258 IEIGKNLPNLRNFVIYTNNFTGSLPDSFSNASNLEVLHLAENQFRGQVSINFNGLKDLSMLGLATN-FLGNGAANDLDFV 336 (1009)
Q Consensus 258 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~L~~N-~l~~~~~~~~~~~ 336 (1009)
..+ ..+++|+.|+|++|...+.+|. ++.+++|++|+|++|......|..+..+++|+.|++++| .+..++..
T Consensus 628 ~~~-~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~----- 700 (1153)
T PLN03210 628 DGV-HSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTG----- 700 (1153)
T ss_pred ccc-ccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCc-----
Confidence 554 3466666777666554444453 566666666666666544444444555555555555442 22222210
Q ss_pred hhcccccccceEEccCCCCCCcCchhhhhhcccceEEEcCCCccccCCCccccCcCccCEEEccCCCCCCCCCCCcCCcc
Q 047768 337 DLLTNCTKLQYLYLADNGFGGVLPHSIANLSTALIDFNLGKNQIYGTIPPGIANLVNLNSLRMEANRLTGTIPHVIGELK 416 (1009)
Q Consensus 337 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 416 (1009)
.++++|+.|++++|...+.+|.. ..+|+.|++++|.+. .+|..+ .+++|+.|++.++.... ++
T Consensus 701 ---i~l~sL~~L~Lsgc~~L~~~p~~----~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~-l~------- 763 (1153)
T PLN03210 701 ---INLKSLYRLNLSGCSRLKSFPDI----STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEK-LW------- 763 (1153)
T ss_pred ---CCCCCCCEEeCCCCCCccccccc----cCCcCeeecCCCccc-cccccc-cccccccccccccchhh-cc-------
Confidence 13445555555555433222221 123344444444443 223222 23334444333322110 00
Q ss_pred cccceecccccccCCCCcccccccccccccccCcccccccCCCCCCCCCccccccCCCCccCCCchhhhhhccceeeEec
Q 047768 417 NLQLLHLHANFLQGTIPSSLGNLTLLTYLSFGANNLQGNIPFSLGNCKNLMFFFAPRNKLTGALPQQILEITTLSLSLDL 496 (1009)
Q Consensus 417 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~L~L 496 (1009)
+.+....|..+...++|+.|+|++|...+.+|.+++++++|+.|++++|...
T Consensus 764 ---------~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L------------------- 815 (1153)
T PLN03210 764 ---------ERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINL------------------- 815 (1153)
T ss_pred ---------ccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCc-------------------
Confidence 0011011111122244555555555544455555555555554444433221
Q ss_pred CCCccCCCCCCCccCCCCCCeeeccccccCCCccccccCCCCccEEEecCcccccccccccccccccceEcCCC-ccccc
Q 047768 497 SDNLLNGSLPLGVGNLKSLVRLGIARNQFSGQIPVTLGACTSLEYVELQGNSFSGTIPQSLSSLTSIKELDLSQ-NNFSG 575 (1009)
Q Consensus 497 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~ 575 (1009)
+.+|..+ ++++|+.|++++|.....+|.. .++|+.|+|++|.++ .+|.++..+++|+.|+|++ |++.
T Consensus 816 ------~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~- 883 (1153)
T PLN03210 816 ------ETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ- 883 (1153)
T ss_pred ------CeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-
Confidence 1233332 3455555555554333233322 234555555555555 4555555555555555555 3333
Q ss_pred ccccccccccccCceecccc
Q 047768 576 QIPKYLENLSFLQYLNLSYN 595 (1009)
Q Consensus 576 ~~p~~~~~l~~L~~L~ls~N 595 (1009)
.+|..+..+++|+.++++++
T Consensus 884 ~l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 884 RVSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred ccCcccccccCCCeeecCCC
Confidence 35555555555555555555
No 417
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.90 E-value=1.2e-23 Score=212.24 Aligned_cols=171 Identities=19% Similarity=0.181 Sum_probs=129.2
Q ss_pred CCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccCCCCC
Q 047768 788 GSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSASPL 867 (1009)
Q Consensus 788 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 867 (1009)
|+|.++++.+.. .+++.+++.++.|++.||.|||++ + ||+||+++.++.+|+ ||.++.....
T Consensus 1 GsL~~~l~~~~~-----~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~-- 62 (176)
T smart00750 1 VSLADILEVRGR-----PLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPE-- 62 (176)
T ss_pred CcHHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeeccc--
Confidence 789999987543 399999999999999999999998 5 999999999999999 9999865432
Q ss_pred CCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchhhhccC
Q 047768 868 GNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKVMEIVD 947 (1009)
Q Consensus 868 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 947 (1009)
...||+.|||||++.+..++.++|||||||++|||+||+.||............+...
T Consensus 63 -----------~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~----------- 120 (176)
T smart00750 63 -----------QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNG----------- 120 (176)
T ss_pred -----------cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHH-----------
Confidence 1257899999999999999999999999999999999999986432211111111111
Q ss_pred CCCCChhhhhhhccccccHHHH--HHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 047768 948 PSLLPLEEERTNSRRVRNEECL--VAVIKTGVACSIESPFDRMEMTDVVVKLCHARQNF 1004 (1009)
Q Consensus 948 ~~l~~~~~~r~~~~~~~~~~~~--~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~~~ 1004 (1009)
.....+..+. ...... .++.+++.+|+..+|++||++.|+++.+..+..+.
T Consensus 121 -~~~~~~~~~~-----~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~~ 173 (176)
T smart00750 121 -MPADDPRDRS-----NLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAET 173 (176)
T ss_pred -hccCCccccc-----cHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHHH
Confidence 0000011000 001112 25889999999999999999999999998776543
No 418
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.90 E-value=4.2e-24 Score=209.63 Aligned_cols=246 Identities=23% Similarity=0.306 Sum_probs=185.6
Q ss_pred CCcccccCCceEEEEEEecCCeEEEEEEeeccccc--chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEe
Q 047768 706 SNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG--GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYE 783 (1009)
Q Consensus 706 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 783 (1009)
.-+|.+...|+.|+|+|. |..+++|+++..+.. ..+.|..|.-.++.+.||||+.++|.|... ....++..
T Consensus 195 ~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsp-----pnlv~isq 267 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSP-----PNLVIISQ 267 (448)
T ss_pred hhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCC-----CCceEeee
Confidence 456888999999999997 556777888654332 346899999999999999999999999764 67889999
Q ss_pred ccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEe--ccccccc
Q 047768 784 YMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS--DFGLAKF 861 (1009)
Q Consensus 784 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~--DfGla~~ 861 (1009)
||+.|||+..+++.... ..+..++.++|.++|+|++|||+. .|-|.---+.++.|++|++.+++|+ |--++..
T Consensus 268 ~mp~gslynvlhe~t~v----vvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsfq 342 (448)
T KOG0195|consen 268 YMPFGSLYNVLHEQTSV----VVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ 342 (448)
T ss_pred eccchHHHHHHhcCccE----EEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeeee
Confidence 99999999999987643 477788999999999999999996 3344455788999999999998884 3222221
Q ss_pred cCCCCCCCccccCCccccccccccccCccccCCCCC---CCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhc
Q 047768 862 LSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEA---SMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRAL 938 (1009)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 938 (1009)
. .+..-.+.||+||.++..+. -.++|+|||++++||+.|+..||.....-...+.-.
T Consensus 343 e---------------~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkia----- 402 (448)
T KOG0195|consen 343 E---------------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIA----- 402 (448)
T ss_pred c---------------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhh-----
Confidence 1 11223678999999988765 357999999999999999999998654332111111
Q ss_pred cchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 047768 939 PEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHAR 1001 (1009)
Q Consensus 939 ~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~ 1001 (1009)
-+.++--+.+ .....+.+++.-|+.+||.+||.++.++-.|+++.
T Consensus 403 leglrv~ipp------------------gis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 403 LEGLRVHIPP------------------GISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred hccccccCCC------------------CccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 1111111111 12235778999999999999999999999988764
No 419
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.90 E-value=3.9e-23 Score=246.24 Aligned_cols=252 Identities=25% Similarity=0.346 Sum_probs=165.1
Q ss_pred HhhcCChhhHHHHHHHHHhcCCCCCCCCC----CccCCCCCCCCC---------------ccceeeCCCCCeEEEEEeec
Q 047768 19 ALALSNETDCLSLLAIKSQLHDPLGVTSS----WNRSACVNLCQH---------------WTGVTCGRRNQRVTKLDLRN 79 (1009)
Q Consensus 19 ~~~~~~~~d~~aLl~~k~~~~~~~~~~~s----W~~~~~~~~c~~---------------w~gv~C~~~~~~v~~l~l~~ 79 (1009)
+.+..+++|.+++++..+.+.-|. ..++ |++. +++|-. =.-|.|.. +.|+.+..-+
T Consensus 56 ~~~~~~~~~~~~~~~~~~~l~~p~-~~~~~~~~~~~~--~~fc~~~~~~~~~l~~~~~~~~~tv~~~~--~~vt~l~~~g 130 (754)
T PRK15370 56 PPETASPEEIKSKFECLRMLAFPA-YADNIQYSRGGA--DQYCILSENSQEILSIVFNTEGYTVEGGG--KSVTYTRVTE 130 (754)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCc-hhhccccccCCC--CcccccCCcchhhheeeecCCceEEecCC--Cccccccccc
Confidence 344567899999999999986663 4555 9876 577821 11277864 4677766654
Q ss_pred CCccccc--------------------Cc--------cc-----cCCCCCCeeeecCCcCCccCCccccCcccccccccc
Q 047768 80 QSIGGIL--------------------SP--------YV-----GNLSFLRYINIADNDFHGEIPDRIGNLFRLETLVLA 126 (1009)
Q Consensus 80 ~~l~~~~--------------------~~--------~~-----~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls 126 (1009)
....... ++ .+ +-..+...|++++++++ .+|..+. ++|+.|+|+
T Consensus 131 ~~~~~~~~~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls 207 (754)
T PRK15370 131 SEQASSASGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLT-TIPACIP--EQITTLILD 207 (754)
T ss_pred ccccccCCCCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcC-cCCcccc--cCCcEEEec
Confidence 2211100 00 00 11245678888888888 6777664 478888888
Q ss_pred ccccCCCCCCCCcCCCcCcEEecccccccCCCchHHhhhccCCcCeEeecCccCCCCCCcccCCccccceeecccCcccC
Q 047768 127 NNSFSGRIPTNLSHCSKLITFSAHRNNLVGEIPEELISRRLFNLQGLSVGDNQLTGQLPASIGNLSALRVIDIRTNRLWG 206 (1009)
Q Consensus 127 ~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 206 (1009)
+|.|+ .+|..+. ++|++|++++|+++ .+|..+. .+|+.|+|++|++. .+|..+. ++|+.|+|++|+|+
T Consensus 208 ~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~----~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~- 275 (754)
T PRK15370 208 NNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP----DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS- 275 (754)
T ss_pred CCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh----ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-
Confidence 88888 5666554 47888888888877 5676553 36888888888887 5666653 47888888888886
Q ss_pred CCCcccccccccccccccCccCCCCCCCcccCCChHHHHHhhCCccCCCCChhhccCCCcccceeccccccCCCCCCCcC
Q 047768 207 KIPITLSQLTSLAYLHVGDNHFSGTIPPSVYNISSLVEIYLYGNRFTGSLPIEIGKNLPNLRNFVIYTNNFTGSLPDSFS 286 (1009)
Q Consensus 207 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 286 (1009)
.+|..+. ++|++|+|++|+|+ .+|..+. ++|+.|++++|+++ .+|..++ ++|+.|++++|.+++ +|..+.
T Consensus 276 ~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls~N~Lt-~LP~~l~---~sL~~L~Ls~N~Lt~-LP~~l~ 345 (754)
T PRK15370 276 CLPENLP--EELRYLSVYDNSIR-TLPAHLP--SGITHLNVQSNSLT-ALPETLP---PGLKTLEAGENALTS-LPASLP 345 (754)
T ss_pred ccccccC--CCCcEEECCCCccc-cCcccch--hhHHHHHhcCCccc-cCCcccc---ccceeccccCCcccc-CChhhc
Confidence 4566554 47888888888887 4565443 46888888888887 5665443 466666677776664 344332
Q ss_pred cccccccccccccccc
Q 047768 287 NASNLEVLHLAENQFR 302 (1009)
Q Consensus 287 ~l~~L~~L~Ls~N~l~ 302 (1009)
++|+.|+|++|+|+
T Consensus 346 --~sL~~L~Ls~N~L~ 359 (754)
T PRK15370 346 --PELQVLDVSKNQIT 359 (754)
T ss_pred --CcccEEECCCCCCC
Confidence 45666666666554
No 420
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.90 E-value=4.8e-24 Score=264.96 Aligned_cols=207 Identities=18% Similarity=0.224 Sum_probs=139.4
Q ss_pred hcCC-CCcceEEeeeecccc--CCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 047768 754 SIRH-RNLIKIVTICSSIDF--KGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQ 830 (1009)
Q Consensus 754 ~l~h-~niv~l~~~~~~~~~--~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ 830 (1009)
.++| +||+++++++..... ......+.++||+ +++|.+++..... .+++.+++.++.||++||+|||++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~-- 99 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDR-----SVDAFECFHVFRQIVEIVNAAHSQ-- 99 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccc-----cccHHHHHHHHHHHHHHHHHHHhC--
Confidence 4455 588888887633221 1223567788887 6699999975432 389999999999999999999999
Q ss_pred CCceecCCCCCceeeCCCC-------------------ceEEeccccccccCCCCCC------Cccc--cCCcccccccc
Q 047768 831 PPIVHGDLKPSNVLLDHDM-------------------VAHVSDFGLAKFLSASPLG------NVVE--TPSSSIGVKGT 883 (1009)
Q Consensus 831 ~~ivHrdlk~~Nill~~~~-------------------~~kl~DfGla~~~~~~~~~------~~~~--~~~~~~~~~gt 883 (1009)
+||||||||+|||++..+ .+|++|||+++........ .... .+.......||
T Consensus 100 -gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 178 (793)
T PLN00181 100 -GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEM 178 (793)
T ss_pred -CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCC
Confidence 999999999999996544 4555566665532110000 0000 00111224689
Q ss_pred ccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhcccc
Q 047768 884 IGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRV 963 (1009)
Q Consensus 884 ~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~ 963 (1009)
+.|||||++.+..++.++|||||||++|||++|..|+..... ........ ...+ ..
T Consensus 179 ~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~---~~~~~~~~--------~~~~----~~--------- 234 (793)
T PLN00181 179 SWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR---TMSSLRHR--------VLPP----QI--------- 234 (793)
T ss_pred cceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH---HHHHHHHh--------hcCh----hh---------
Confidence 999999999999999999999999999999999888652110 01111000 0000 00
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 964 RNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 964 ~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
.....+...++.+|++.+|.+||+|.|+++
T Consensus 235 --~~~~~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 235 --LLNWPKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred --hhcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence 011223457788999999999999999975
No 421
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=2.4e-23 Score=246.02 Aligned_cols=259 Identities=25% Similarity=0.317 Sum_probs=153.8
Q ss_pred HHHhhCCccCCCCChhhccCCCcccceeccccccCCCCCCCcCccccccccccccccccccccccccccccccccccccc
Q 047768 244 EIYLYGNRFTGSLPIEIGKNLPNLRNFVIYTNNFTGSLPDSFSNASNLEVLHLAENQFRGQVSINFNGLKDLSMLGLATN 323 (1009)
Q Consensus 244 ~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~L~~N 323 (1009)
.|+|++|.|+ .+|..+. ++|+.|++++|+++. +|. .+++|++|+|++|+|+.++..
T Consensus 205 ~LdLs~~~Lt-sLP~~l~---~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~LtsLP~l---------------- 260 (788)
T PRK15387 205 VLNVGESGLT-TLPDCLP---AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTSLPVL---------------- 260 (788)
T ss_pred EEEcCCCCCC-cCCcchh---cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccCcccCc----------------
Confidence 4566666666 5665543 245666666666663 232 134555555555555533210
Q ss_pred ccCCCCCCCcchhhhcccccccceEEccCCCCCCcCchhhhhhcccceEEEcCCCccccCCCccccCcCccCEEEccCCC
Q 047768 324 FLGNGAANDLDFVDLLTNCTKLQYLYLADNGFGGVLPHSIANLSTALIDFNLGKNQIYGTIPPGIANLVNLNSLRMEANR 403 (1009)
Q Consensus 324 ~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 403 (1009)
.++|+.|+|++|.++ .+|. +...|..|++++|+|+ .+|.. +++|+.|+|++|+
T Consensus 261 ------------------p~sL~~L~Ls~N~L~-~Lp~----lp~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~ 313 (788)
T PRK15387 261 ------------------PPGLLELSIFSNPLT-HLPA----LPSGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQ 313 (788)
T ss_pred ------------------ccccceeeccCCchh-hhhh----chhhcCEEECcCCccc-ccccc---ccccceeECCCCc
Confidence 134555555555554 2222 2234555666666665 23332 3456666666666
Q ss_pred CCCCCCCCcCCcccccceecccccccCCCCcccccccccccccccCcccccccCCCCCCCCCccccccCCCCccCCCchh
Q 047768 404 LTGTIPHVIGELKNLQLLHLHANFLQGTIPSSLGNLTLLTYLSFGANNLQGNIPFSLGNCKNLMFFFAPRNKLTGALPQQ 483 (1009)
Q Consensus 404 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~ 483 (1009)
|++ +|... .+|+.|++++|+|++ +|.. ..+|++|+|++|+|+ .+|... .+|..
T Consensus 314 L~~-Lp~lp---~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls-~LP~lp---~~L~~--------------- 366 (788)
T PRK15387 314 LAS-LPALP---SELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLA-SLPTLP---SELYK--------------- 366 (788)
T ss_pred ccc-CCCCc---ccccccccccCcccc-cccc---ccccceEecCCCccC-CCCCCC---cccce---------------
Confidence 663 33322 345566666666663 4431 135666666666666 344322 22222
Q ss_pred hhhhccceeeEecCCCccCCCCCCCccCCCCCCeeeccccccCCCccccccCCCCccEEEecCccccccccccccccccc
Q 047768 484 ILEITTLSLSLDLSDNLLNGSLPLGVGNLKSLVRLGIARNQFSGQIPVTLGACTSLEYVELQGNSFSGTIPQSLSSLTSI 563 (1009)
Q Consensus 484 ~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 563 (1009)
|++++|+|+ .+|... .+|+.|++++|+|++ +|... ++|+.|++++|+|+ .+|..+ .+|
T Consensus 367 ----------L~Ls~N~L~-~LP~l~---~~L~~LdLs~N~Lt~-LP~l~---s~L~~LdLS~N~Ls-sIP~l~---~~L 424 (788)
T PRK15387 367 ----------LWAYNNRLT-SLPALP---SGLKELIVSGNRLTS-LPVLP---SELKELMVSGNRLT-SLPMLP---SGL 424 (788)
T ss_pred ----------ehhhccccc-cCcccc---cccceEEecCCcccC-CCCcc---cCCCEEEccCCcCC-CCCcch---hhh
Confidence 555555555 244332 467888888888874 55433 57888888888888 466543 467
Q ss_pred ceEcCCCcccccccccccccccccCceecccccCcccCCC
Q 047768 564 KELDLSQNNFSGQIPKYLENLSFLQYLNLSYNHFEGEVPT 603 (1009)
Q Consensus 564 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~ 603 (1009)
+.|+|++|+|+ .+|..+.++++|+.|+|++|+|+|.+|.
T Consensus 425 ~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 425 LSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred hhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHH
Confidence 88899999987 7888888889999999999999887775
No 422
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=1e-23 Score=249.10 Aligned_cols=146 Identities=27% Similarity=0.328 Sum_probs=94.8
Q ss_pred ccCEEEccCCCCCCCCCCCcCCcccccceecccccccCCCCcccccccccccccccCcccccccCCCCCCCCCccccccC
Q 047768 393 NLNSLRMEANRLTGTIPHVIGELKNLQLLHLHANFLQGTIPSSLGNLTLLTYLSFGANNLQGNIPFSLGNCKNLMFFFAP 472 (1009)
Q Consensus 393 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~ 472 (1009)
+|+.|++++|+|++ +|.. ..+|+.|+|++|+|++ +|... .+|+.|++++|+|+ .+|... .+|+.
T Consensus 323 ~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~lp---~~L~~L~Ls~N~L~-~LP~l~---~~L~~---- 386 (788)
T PRK15387 323 ELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTLP---SELYKLWAYNNRLT-SLPALP---SGLKE---- 386 (788)
T ss_pred cccccccccCcccc-cccc---ccccceEecCCCccCC-CCCCC---cccceehhhccccc-cCcccc---cccce----
Confidence 35555666666653 3321 1356666666666663 44322 34666677777776 345322 22332
Q ss_pred CCCccCCCchhhhhhccceeeEecCCCccCCCCCCCccCCCCCCeeeccccccCCCccccccCCCCccEEEecCcccccc
Q 047768 473 RNKLTGALPQQILEITTLSLSLDLSDNLLNGSLPLGVGNLKSLVRLGIARNQFSGQIPVTLGACTSLEYVELQGNSFSGT 552 (1009)
Q Consensus 473 ~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 552 (1009)
|++++|+|++ +|.. .++|+.|++++|+|++ +|... .+|+.|+|++|+|+ .
T Consensus 387 ---------------------LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt-~ 436 (788)
T PRK15387 387 ---------------------LIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLT-R 436 (788)
T ss_pred ---------------------EEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcch---hhhhhhhhccCccc-c
Confidence 5555555553 4432 2468888888888884 66543 46788999999998 7
Q ss_pred cccccccccccceEcCCCcccccccccccccc
Q 047768 553 IPQSLSSLTSIKELDLSQNNFSGQIPKYLENL 584 (1009)
Q Consensus 553 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 584 (1009)
+|..++++++|+.|+|++|+|++.+|..+..+
T Consensus 437 LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~l 468 (788)
T PRK15387 437 LPESLIHLSSETTVNLEGNPLSERTLQALREI 468 (788)
T ss_pred cChHHhhccCCCeEECCCCCCCchHHHHHHHH
Confidence 88889999999999999999998888776444
No 423
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=6.9e-23 Score=224.73 Aligned_cols=173 Identities=21% Similarity=0.168 Sum_probs=131.7
Q ss_pred HhccCccCCcccccCCceEEEEEEec-CCeEEEEEEeeccc-----ccchHHHHHHHHHHHhcCCCCcceEEeeeecccc
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLHE-NGMLVAVKVINLEQ-----KGGSKSFAAECEALRSIRHRNLIKIVTICSSIDF 772 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 772 (1009)
...+|.+.+.||+|+||+||+|.++. +++.||||++.... ......+.+|++++++++|+|++..+..+
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----- 90 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----- 90 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc-----
Confidence 35689999999999999999999875 67888999875321 11245689999999999999998533221
Q ss_pred CCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCC-CCCceeeCCCCce
Q 047768 773 KGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDL-KPSNVLLDHDMVA 851 (1009)
Q Consensus 773 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdl-k~~Nill~~~~~~ 851 (1009)
...++||||+++++|... .. .. ...++.++++||+|||+. +|+|||| ||+||+++.++.+
T Consensus 91 ---~~~~LVmE~~~G~~L~~~-~~---------~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~i 151 (365)
T PRK09188 91 ---GKDGLVRGWTEGVPLHLA-RP---------HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEA 151 (365)
T ss_pred ---CCcEEEEEccCCCCHHHh-Cc---------cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCE
Confidence 346899999999999632 11 11 145788999999999999 9999999 9999999999999
Q ss_pred EEeccccccccCCCCCCCccccCCccccccccccccCccccCCC
Q 047768 852 HVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG 895 (1009)
Q Consensus 852 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 895 (1009)
||+|||+|+.....................+++.|+|||++...
T Consensus 152 kLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 152 AVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred EEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 99999999987654322111111222356788999999987554
No 424
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=2.1e-21 Score=214.94 Aligned_cols=270 Identities=22% Similarity=0.246 Sum_probs=197.6
Q ss_pred cCccCCcccccCCceEEEEEEecCC-eEEEEEEeecccccchHHHHHHHHHHHhcCC----CCcceEEeeeeccccCCCc
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENG-MLVAVKVINLEQKGGSKSFAAECEALRSIRH----RNLIKIVTICSSIDFKGVD 776 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~~~ 776 (1009)
+|.+.+.||+|+||.||.|....++ ..+|+|............+..|+.++..+.+ +++..+++... ....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~----~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR----STED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc----CCCc
Confidence 7999999999999999999987554 6789998765433333378889999998863 57778877642 2346
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCC-----Cce
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHD-----MVA 851 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~-----~~~ 851 (1009)
+.++||+.+ |.+|.++...... ..++..+...|+.|++.+|.++|+. |++||||||.|++++.. ..+
T Consensus 95 ~~~iVM~l~-G~sL~dl~~~~~~----~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~ 166 (322)
T KOG1164|consen 95 FNFIVMSLL-GPSLEDLRKRNPP----GRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTL 166 (322)
T ss_pred eeEEEEecc-CccHHHHHHhCCC----CCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceE
Confidence 789999987 8899998876652 2489999999999999999999999 99999999999999865 469
Q ss_pred EEeccccccccC--CCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCcc
Q 047768 852 HVSDFGLAKFLS--ASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLT 929 (1009)
Q Consensus 852 kl~DfGla~~~~--~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~ 929 (1009)
.+.|||+|+... .................+||..|+++.+..+.+.+++.|+||++.++.|+..|..||........
T Consensus 167 ~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~- 245 (322)
T KOG1164|consen 167 YLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL- 245 (322)
T ss_pred EEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-
Confidence 999999999432 22111101111113457799999999999999999999999999999999999999864432211
Q ss_pred HHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 047768 930 LHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHARQN 1003 (1009)
Q Consensus 930 ~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~~~ 1003 (1009)
..+..... ....... . ....+.++.+++..+-..+..++|....+...+......
T Consensus 246 ~~~~~~~~----~~~~~~~-~--------------~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 246 KSKFEKDP----RKLLTDR-F--------------GDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred HHHHHHHh----hhhcccc-c--------------cCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 11111100 0000000 0 011223456666666678999999999999998776654
No 425
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=2.9e-21 Score=195.64 Aligned_cols=265 Identities=18% Similarity=0.252 Sum_probs=199.6
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcC-CCCcceEEeeeeccccCCCceEE
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIR-HRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
-.|.++++||+|.||+++.|+.--+++.||||.-.. +....++..|.+..+.+. .++|..++-+. +++.+-.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr--kS~APQLrdEYr~YKlL~g~~GIP~vYYFG-----qeG~~Ni 100 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR--KSEAPQLRDEYRTYKLLGGTEGIPQVYYFG-----QEGKYNI 100 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccc--cCCcchHHHHHHHHHHHcCCCCCCceeeec-----cccchhh
Confidence 379999999999999999999988999999997432 234567888999998884 68888877653 3346678
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCC-----ceEEe
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDM-----VAHVS 854 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~-----~~kl~ 854 (1009)
+|+|.+ |-||.|.+.-++.. ++..++..+|.|+..-++|+|++ .+|.|||||+|+||+..+ .+.++
T Consensus 101 LVidLL-GPSLEDLFD~CgR~-----FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~Ihii 171 (449)
T KOG1165|consen 101 LVIDLL-GPSLEDLFDLCGRR-----FSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHII 171 (449)
T ss_pred hhhhhh-CcCHHHHHHHhcCc-----ccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEE
Confidence 999988 88999999887764 99999999999999999999999 999999999999997544 68999
Q ss_pred ccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccC--CccHHH
Q 047768 855 DFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNE--GLTLHE 932 (1009)
Q Consensus 855 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~--~~~~~~ 932 (1009)
|||+|+.+-+.....-.+. .......||.+||+-....+.+-+.+-|+=|+|=|++..+.|..||.....+ ...+.+
T Consensus 172 DFGmAK~YrDp~TkqHIPY-rE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeK 250 (449)
T KOG1165|consen 172 DFGMAKEYRDPKTKQHIPY-REHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEK 250 (449)
T ss_pred eccchhhhcCccccccCcc-ccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHH
Confidence 9999998876544332222 3334577999999999999999999999999999999999999999754222 111111
Q ss_pred HHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 047768 933 FAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCHAR 1001 (1009)
Q Consensus 933 ~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~i~ 1001 (1009)
+... +|.+.........++++..-+.-.-..+-++-|..+-+..-+..+.
T Consensus 251 IGe~-------------------Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvl 300 (449)
T KOG1165|consen 251 IGET-------------------KRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVL 300 (449)
T ss_pred hccc-------------------cccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 1111 1111111222234455666666666677777777766555544443
No 426
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=4.7e-21 Score=185.68 Aligned_cols=263 Identities=19% Similarity=0.251 Sum_probs=192.2
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCC-CCcceEEeeeeccccCCCceE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRH-RNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~~~~~ 778 (1009)
...|.++++||.|+||.+|.|....+|..||||+-+... ...++..|.++.+.++| ..|..+..|.. +..+-
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~-----e~~yn 86 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGT-----EKDYN 86 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhcc-----ccccc
Confidence 467899999999999999999999999999999864332 24567789999998865 45555554433 33566
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCC---CceEEec
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHD---MVAHVSD 855 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~---~~~kl~D 855 (1009)
.+||+.. |.||.+.+.-.... ++..+++-.|-|++.-++|+|.+ ++|||||||+|+|++-+ ..+.++|
T Consensus 87 vlVMdLL-GPsLEdLfnfC~R~-----ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LID 157 (341)
T KOG1163|consen 87 VLVMDLL-GPSLEDLFNFCSRR-----FTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLID 157 (341)
T ss_pred eeeeecc-CccHHHHHHHHhhh-----hhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEe
Confidence 8999988 88999998766543 88999999999999999999999 99999999999999754 4689999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccC--CccHHHH
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNE--GLTLHEF 933 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~--~~~~~~~ 933 (1009)
||+|+.+.+......... .......||.+|.+-....+.+-+.+-|+=|+|.++..+-.|..||...... ...+.++
T Consensus 158 FGLaKky~d~~t~~HIpy-re~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI 236 (341)
T KOG1163|consen 158 FGLAKKYRDIRTRQHIPY-REDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKI 236 (341)
T ss_pred ccchhhhccccccccCcc-ccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHH
Confidence 999998766543322222 2334567999999999988888899999999999999999999999764322 1222222
Q ss_pred HHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 047768 934 AKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLC 998 (1009)
Q Consensus 934 ~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~ 998 (1009)
.+......+..+ ....+.++.-.+.-|-...-++-|...-+.+...
T Consensus 237 ~EkK~s~~ie~L-------------------C~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFr 282 (341)
T KOG1163|consen 237 SEKKMSTPIEVL-------------------CKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFR 282 (341)
T ss_pred HHhhcCCCHHHH-------------------hCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHH
Confidence 222222221111 1122334555566677766677776655544443
No 427
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=1.7e-21 Score=232.32 Aligned_cols=215 Identities=21% Similarity=0.389 Sum_probs=173.7
Q ss_pred ccceeeCCCCCeEEEEEeecCCcccccCccccCCCCCCeeeecCCcCCccCCccccCccccccccccccccCCCCCCCCc
Q 047768 60 WTGVTCGRRNQRVTKLDLRNQSIGGILSPYVGNLSFLRYINIADNDFHGEIPDRIGNLFRLETLVLANNSFSGRIPTNLS 139 (1009)
Q Consensus 60 w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 139 (1009)
|.-..|... +.+.|++++++++. +|..+. ++|+.|+|++|+|+ .+|..+. ++|++|+|++|+|+ .+|..+.
T Consensus 170 ~r~~~Cl~~--~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~ 240 (754)
T PRK15370 170 QRMRDCLKN--NKTELRLKILGLTT-IPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP 240 (754)
T ss_pred HHHHhhccc--CceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh
Confidence 333467543 57889999999875 455453 57999999999999 7887665 58999999999998 6777664
Q ss_pred CCCcCcEEecccccccCCCchHHhhhccCCcCeEeecCccCCCCCCcccCCccccceeecccCcccCCCCcccccccccc
Q 047768 140 HCSKLITFSAHRNNLVGEIPEELISRRLFNLQGLSVGDNQLTGQLPASIGNLSALRVIDIRTNRLWGKIPITLSQLTSLA 219 (1009)
Q Consensus 140 ~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 219 (1009)
.+|+.|++++|++. .+|..+. .+|+.|+|++|+|+ .+|..+. ++|+.|++++|+|++ +|..+. ++|+
T Consensus 241 --~~L~~L~Ls~N~L~-~LP~~l~----s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~ 307 (754)
T PRK15370 241 --DTIQEMELSINRIT-ELPERLP----SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGIT 307 (754)
T ss_pred --ccccEEECcCCccC-cCChhHh----CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHH
Confidence 47999999999998 7888763 58999999999999 5787664 589999999999974 555543 5799
Q ss_pred cccccCccCCCCCCCcccCCChHHHHHhhCCccCCCCChhhccCCCcccceeccccccCCCCCCCcCccccccccccccc
Q 047768 220 YLHVGDNHFSGTIPPSVYNISSLVEIYLYGNRFTGSLPIEIGKNLPNLRNFVIYTNNFTGSLPDSFSNASNLEVLHLAEN 299 (1009)
Q Consensus 220 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 299 (1009)
.|++++|+++ .+|..+. ++|+.|++++|.++ .+|..+. ++|+.|++++|+|+. +|..+. ++|++|+|++|
T Consensus 308 ~L~Ls~N~Lt-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~l~---~sL~~L~Ls~N~L~~-LP~~lp--~~L~~LdLs~N 377 (754)
T PRK15370 308 HLNVQSNSLT-ALPETLP--PGLKTLEAGENALT-SLPASLP---PELQVLDVSKNQITV-LPETLP--PTITTLDVSRN 377 (754)
T ss_pred HHHhcCCccc-cCCcccc--ccceeccccCCccc-cCChhhc---CcccEEECCCCCCCc-CChhhc--CCcCEEECCCC
Confidence 9999999999 5676553 68999999999999 7887663 689999999999984 666553 68999999999
Q ss_pred ccccccc
Q 047768 300 QFRGQVS 306 (1009)
Q Consensus 300 ~l~~~~~ 306 (1009)
+++.+++
T Consensus 378 ~Lt~LP~ 384 (754)
T PRK15370 378 ALTNLPE 384 (754)
T ss_pred cCCCCCH
Confidence 9886543
No 428
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.81 E-value=1.1e-18 Score=196.08 Aligned_cols=264 Identities=31% Similarity=0.394 Sum_probs=194.2
Q ss_pred CccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc---chHHHHHHHHHHHhcCCC-CcceEEeeeeccccCCCceE
Q 047768 703 FSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG---GSKSFAAECEALRSIRHR-NLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~~~~~ 778 (1009)
|.+.+.||.|+||.||++.+. ..+|+|.+...... ....+.+|+.+++.+.|+ +++++.++... ....
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-----~~~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQD-----EGSL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEec-----CCEE
Confidence 567788999999999999986 78999998655433 256799999999999988 79999998633 2447
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCC-ceEEeccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDM-VAHVSDFG 857 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~-~~kl~DfG 857 (1009)
+++++|+.++++.+++...... ..+.......+..+++.++.|+|+. +++|||+||+||+++..+ .++++|||
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg 147 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRK---GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFG 147 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccC
Confidence 9999999999999777765421 2388899999999999999999999 999999999999999998 79999999
Q ss_pred cccccCCCCCCCccccCCccccccccccccCccccCC---CCCCCcccchHHHHHHHHHHhCCCCCcccccC--CccHHH
Q 047768 858 LAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG---GEASMRGGVYSYGILLLEIFTRRRPTESMFNE--GLTLHE 932 (1009)
Q Consensus 858 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~--~~~~~~ 932 (1009)
.++............ .......||..|+|||...+ ..+....|+||+|++++++++|..||...... ......
T Consensus 148 ~~~~~~~~~~~~~~~--~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~ 225 (384)
T COG0515 148 LAKLLPDPGSTSSIP--ALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLK 225 (384)
T ss_pred cceecCCCCcccccc--ccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHH
Confidence 998554432110000 12345779999999999888 57889999999999999999999996543321 011111
Q ss_pred HHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 047768 933 FAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVK 996 (1009)
Q Consensus 933 ~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~ 996 (1009)
........ ......... ........+.+++..|+..+|..|.++.+....
T Consensus 226 ~~~~~~~~--------~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 226 IILELPTP--------SLASPLSPS------NPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred HHHhcCCc--------ccccccCcc------ccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 11111100 000000000 001223457788889999999999999987764
No 429
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.81 E-value=1.2e-20 Score=221.12 Aligned_cols=256 Identities=19% Similarity=0.205 Sum_probs=184.3
Q ss_pred cCCcccccCCceEEEEEEecCCeEEEEEEeecc--cccc----hHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 705 SSNTIGRGSFGFVYKGVLHENGMLVAVKVINLE--QKGG----SKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 705 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
..+.+|.|++|.|+.+.........+.|.+... .... ...+..|.-+-..+.|+|++..+..+... ...
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~-----~~~ 396 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEI-----DGI 396 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhc-----ccc
Confidence 457899999998888887766666666654321 1111 12255677777788999998877665433 233
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
.-+||||++ +|..++..... +...++-.++.|+..|+.|+|+. ||.|||+|++|++++.+|.+||+|||.
T Consensus 397 ~~~mE~~~~-Dlf~~~~~~~~------~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~ 466 (601)
T KOG0590|consen 397 LQSMEYCPY-DLFSLVMSNGK------LTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGA 466 (601)
T ss_pred hhhhhcccH-HHHHHHhcccc------cchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCc
Confidence 344999999 99999987632 77788889999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCCCCCC-CcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHh
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEAS-MRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRA 937 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 937 (1009)
+....-... .......+.+|+..|+|||++.+..|. ...||||.|+++..|++|+.||......+..... ..
T Consensus 467 ~~vf~~~~e----~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~---~~ 539 (601)
T KOG0590|consen 467 ASVFRYPWE----KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT---NN 539 (601)
T ss_pred ceeeccCcc----hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhh---hc
Confidence 875543211 111345578899999999999999985 5689999999999999999998765444333200 00
Q ss_pred ccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 047768 938 LPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVV 995 (1009)
Q Consensus 938 ~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~ 995 (1009)
...... + .... ......-+.+...++.++++.||.+|.|+++|++
T Consensus 540 ~~~~~~-~------~~~~------~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 540 YSDQRN-I------FEGP------NRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred cccccc-c------ccCh------HHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 000000 0 0000 0111233455678899999999999999999975
No 430
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.80 E-value=2.1e-20 Score=216.12 Aligned_cols=250 Identities=21% Similarity=0.223 Sum_probs=175.9
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc-cchHHHHHHHHH--HHhcCCCCcceEEeeeeccccCCCceE
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-GGSKSFAAECEA--LRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
++...+.+|+++|=.|.+|++. .|. |+||++-..+. -.-+.|.++++- ....+|||++++.-+- ......
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~-----~t~kAA 96 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVL-----VTDKAA 96 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHH-----HhhHHH
Confidence 6777899999999999999986 454 99999954432 233444444333 4455899999987652 223556
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
|+|-+|+.+ +|+|.+..+.- +...+.+.|++|++.|+..+|.. +|+|||||.+||||+.-..+.|+||..
T Consensus 97 ylvRqyvkh-nLyDRlSTRPF------L~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAs 166 (1431)
T KOG1240|consen 97 YLVRQYVKH-NLYDRLSTRPF------LVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFAS 166 (1431)
T ss_pred HHHHHHHhh-hhhhhhccchH------HHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccc
Confidence 788888855 99999987764 78889999999999999999999 999999999999999999999999976
Q ss_pred ccccCCCCCCCccccCCccccccccccccCccccCCC----------C-CCCcccchHHHHHHHHHHh-CCCCCcccccC
Q 047768 859 AKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG----------E-ASMRGGVYSYGILLLEIFT-RRRPTESMFNE 926 (1009)
Q Consensus 859 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------~-~~~~~DvwS~Gvvl~ellt-g~~p~~~~~~~ 926 (1009)
-+...-... +..+......+...-..|+|||.+... . .+++.||||+|||++|+++ |++||.-
T Consensus 167 FKPtYLPeD-NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L---- 241 (1431)
T KOG1240|consen 167 FKPTYLPED-NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL---- 241 (1431)
T ss_pred cCCccCCCC-CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH----
Confidence 543322110 101111111112233579999975441 2 5788999999999999999 7888752
Q ss_pred CccHHHHHHHh-----ccch-hhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 047768 927 GLTLHEFAKRA-----LPEK-VMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLCH 999 (1009)
Q Consensus 927 ~~~~~~~~~~~-----~~~~-~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~~ 999 (1009)
.+..... .++. +..+-| ..+..++..|++.||+.|.+|+++++.-++
T Consensus 242 ----SQL~aYr~~~~~~~e~~Le~Ied----------------------~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 242 ----SQLLAYRSGNADDPEQLLEKIED----------------------VSLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred ----HHHHhHhccCccCHHHHHHhCcC----------------------ccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 1111110 1111 111111 135688899999999999999999988554
No 431
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.79 E-value=2.9e-19 Score=180.72 Aligned_cols=140 Identities=19% Similarity=0.159 Sum_probs=108.1
Q ss_pred CCcccccCCceEEEEEEecCCeEEEEEEeeccccc--c-------h-----------------HHHHHHHHHHHhcCCCC
Q 047768 706 SNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG--G-------S-----------------KSFAAECEALRSIRHRN 759 (1009)
Q Consensus 706 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~-------~-----------------~~~~~E~~~l~~l~h~n 759 (1009)
...||+|+||.||+|... +|+.||||+++..... . . .....|++.+.++.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 467999999999999986 8999999999754211 0 0 12234999999998877
Q ss_pred cceEEeeeeccccCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHH-hhcCCCCceecCC
Q 047768 760 LIKIVTICSSIDFKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYL-HHHCQPPIVHGDL 838 (1009)
Q Consensus 760 iv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~L-H~~~~~~ivHrdl 838 (1009)
+.....+.. ...++||||++++++........ .+++.+...++.|++.++.|+ |+. +|+||||
T Consensus 81 v~~p~~~~~-------~~~~iVmE~i~g~~l~~~~~~~~------~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDl 144 (190)
T cd05147 81 IPCPEPILL-------KSHVLVMEFIGDDGWAAPRLKDA------PLSESKARELYLQVIQIMRILYQDC---RLVHADL 144 (190)
T ss_pred CCCCcEEEe-------cCCEEEEEEeCCCCCcchhhhcC------CCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence 644333211 22379999999887765433222 388899999999999999999 687 9999999
Q ss_pred CCCceeeCCCCceEEeccccccccC
Q 047768 839 KPSNVLLDHDMVAHVSDFGLAKFLS 863 (1009)
Q Consensus 839 k~~Nill~~~~~~kl~DfGla~~~~ 863 (1009)
||+||+++ ++.++++|||+|....
T Consensus 145 kP~NIli~-~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 145 SEYNLLYH-DGKLYIIDVSQSVEHD 168 (190)
T ss_pred CHHHEEEE-CCcEEEEEccccccCC
Confidence 99999998 4789999999997543
No 432
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.79 E-value=3e-21 Score=177.24 Aligned_cols=184 Identities=29% Similarity=0.507 Sum_probs=141.4
Q ss_pred ccCcCccCEEEccCCCCCCCCCCCcCCcccccceecccccccCCCCcccccccccccccccCcccccccCCCCCCCCCcc
Q 047768 388 IANLVNLNSLRMEANRLTGTIPHVIGELKNLQLLHLHANFLQGTIPSSLGNLTLLTYLSFGANNLQGNIPFSLGNCKNLM 467 (1009)
Q Consensus 388 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 467 (1009)
+.++.+.+.|.||+|+++ .+|..++.+.+|+.|++++|+++ ..|.+++.+++|+.|+++-|++. ..|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 445666777777788777 66667777888888888888887 67777788888888888888877 7777788777777
Q ss_pred ccccCCCCccCCCchhhhhhccceeeEecCCCccCCCCCCCccCCCCCCeeeccccccCCCccccccCCCCccEEEecCc
Q 047768 468 FFFAPRNKLTGALPQQILEITTLSLSLDLSDNLLNGSLPLGVGNLKSLVRLGIARNQFSGQIPVTLGACTSLEYVELQGN 547 (1009)
Q Consensus 468 ~l~l~~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N 547 (1009)
.|++..|.+.. ..+|..|..++.|+-|+|+.|.+. .+|..++++++|+.|.+..|
T Consensus 106 vldltynnl~e------------------------~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdn 160 (264)
T KOG0617|consen 106 VLDLTYNNLNE------------------------NSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDN 160 (264)
T ss_pred hhhcccccccc------------------------ccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccC
Confidence 65555444431 256777888888999999999997 89999999999999999999
Q ss_pred ccccccccccccccccceEcCCCccccccccccccccccc---CceecccccCcccC
Q 047768 548 SFSGTIPQSLSSLTSIKELDLSQNNFSGQIPKYLENLSFL---QYLNLSYNHFEGEV 601 (1009)
Q Consensus 548 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L---~~L~ls~N~l~g~~ 601 (1009)
.+- .+|..++.|+.|++|.+.+|+++ .+|++++++.-+ +.+.+.+|++..+|
T Consensus 161 dll-~lpkeig~lt~lrelhiqgnrl~-vlppel~~l~l~~~k~v~r~E~NPwv~pI 215 (264)
T KOG0617|consen 161 DLL-SLPKEIGDLTRLRELHIQGNRLT-VLPPELANLDLVGNKQVMRMEENPWVNPI 215 (264)
T ss_pred chh-hCcHHHHHHHHHHHHhcccceee-ecChhhhhhhhhhhHHHHhhhhCCCCChH
Confidence 987 88999999999999999999998 788887776432 34445555554333
No 433
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.79 E-value=3.3e-19 Score=198.50 Aligned_cols=218 Identities=27% Similarity=0.414 Sum_probs=163.2
Q ss_pred HHhcCCCCcceEEeeeeccccCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCC
Q 047768 752 LRSIRHRNLIKIVTICSSIDFKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQP 831 (1009)
Q Consensus 752 l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~ 831 (1009)
|+.+.|.|+.+++|.+... ...++|.+||..|+|.|.+.....+ +++.....+.++++.||.|+|+.
T Consensus 1 l~~l~h~n~~~f~g~~~~~-----~~~~~i~~~c~rGsl~D~i~~~~~~-----~d~~F~~s~~rdi~~Gl~ylh~s--- 67 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG-----PEMIVIWEYCSRGSLLDILSNEDIK-----LDYFFILSFIRDISKGLAYLHNS--- 67 (484)
T ss_pred CcccchhhhhhheeeEecC-----CceEEEEeeecCccHHhHHhccccC-----ccHHHHHHHHHHHHHHHHHHhcC---
Confidence 3568999999999998764 6789999999999999999986543 99999999999999999999987
Q ss_pred Cc-eecCCCCCceeeCCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCC-------CCCCcccc
Q 047768 832 PI-VHGDLKPSNVLLDHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGG-------EASMRGGV 903 (1009)
Q Consensus 832 ~i-vHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~Dv 903 (1009)
+| .|+.++++|++++....+|++|||+........ .........-..-|.|||.+... ..+.++||
T Consensus 68 ~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~------~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdi 141 (484)
T KOG1023|consen 68 PIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETA------EPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDI 141 (484)
T ss_pred cceeeeeeccccceeeeeEEEEechhhhcccccccc------cccccchhHHHHhccCHHHhcccccccccccccccCCe
Confidence 55 999999999999999999999999988765310 00111122245679999987764 14678999
Q ss_pred hHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCC
Q 047768 904 YSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIES 983 (1009)
Q Consensus 904 wS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~d 983 (1009)
||||++++|+++++.||......... .+.+... .+.-..-. ||..... .+...++..++.+||..+
T Consensus 142 Ys~~ii~~ei~~r~~~~~~~~~~~~~-~eii~~~-----~~~~~~~~------rP~i~~~--~e~~~~l~~l~~~cw~e~ 207 (484)
T KOG1023|consen 142 YSFGIIMYEILFRSGPFDLRNLVEDP-DEIILRV-----KKGGSNPF------RPSIELL--NELPPELLLLVARCWEEI 207 (484)
T ss_pred ehHHHHHHHHHhccCccccccccCCh-HHHHHHH-----HhcCCCCc------Ccchhhh--hhcchHHHHHHHHhcccC
Confidence 99999999999999999864333222 2222221 11001111 1111111 033446889999999999
Q ss_pred CCCCCCHHHHHHHHHHHHH
Q 047768 984 PFDRMEMTDVVVKLCHARQ 1002 (1009)
Q Consensus 984 p~~Rpt~~evl~~L~~i~~ 1002 (1009)
|+.||++++|-..++.+..
T Consensus 208 P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 208 PEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred hhhCccHHHHHhhhhhhcc
Confidence 9999999999998887665
No 434
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.79 E-value=1.7e-19 Score=183.38 Aligned_cols=175 Identities=13% Similarity=0.133 Sum_probs=134.4
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHH---------HHHHHHHHHhcCCCCcceEEeeeecc
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKS---------FAAECEALRSIRHRNLIKIVTICSSI 770 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~h~niv~l~~~~~~~ 770 (1009)
..+|...+.+|.|+||.||.+.. ++..+|||+++.......+. +.+|++.+.++.|++|..+.++....
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 57899999999999999999755 46689999997554333322 68999999999999999998875432
Q ss_pred cc---CCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCC
Q 047768 771 DF---KGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDH 847 (1009)
Q Consensus 771 ~~---~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~ 847 (1009)
.. .-....++||||++|.+|.++.. ++. ....+++.++..+|.. +++|||++|+||+++.
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~----------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~ 170 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE----------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSK 170 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh----------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeC
Confidence 11 11245789999999999988731 222 2456899999999999 9999999999999999
Q ss_pred CCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHH
Q 047768 848 DMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIF 914 (1009)
Q Consensus 848 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ell 914 (1009)
++ ++++|||..+....... ...+.....+..++|+||||+.+.-+.
T Consensus 171 ~g-i~liDfg~~~~~~e~~a--------------------~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 171 NG-LRIIDLSGKRCTAQRKA--------------------KDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CC-EEEEECCCcccccchhh--------------------HHHHHHHhHhcccccccceeEeehHHH
Confidence 98 99999998875432110 011445556778999999999887654
No 435
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.78 E-value=8e-19 Score=181.84 Aligned_cols=207 Identities=23% Similarity=0.233 Sum_probs=145.2
Q ss_pred CCCCcceEEeeeecc----------------------ccCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHH
Q 047768 756 RHRNLIKIVTICSSI----------------------DFKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLN 813 (1009)
Q Consensus 756 ~h~niv~l~~~~~~~----------------------~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~ 813 (1009)
+|||||++.+++.+. ...+....|+||...+. +|.+|+..+. .+.....-
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~-------~s~r~~~~ 345 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH-------RSYRTGRV 345 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC-------CchHHHHH
Confidence 599999998876432 12335678899988754 9999998765 56667778
Q ss_pred HHHHHHHHHHHHhhcCCCCceecCCCCCceee--CCCC--ceEEeccccccccCCCCCCCccccCCccccccccccccCc
Q 047768 814 IVIDVASAVEYLHHHCQPPIVHGDLKPSNVLL--DHDM--VAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAP 889 (1009)
Q Consensus 814 i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill--~~~~--~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 889 (1009)
+..|+++|+.|||.+ ||.|||+|++|||+ |+|+ ...|+|||++---+... -..+.........|...-|||
T Consensus 346 ~laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hG--lqlpy~S~~Vd~GGNa~lmAP 420 (598)
T KOG4158|consen 346 ILAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHG--LQLPYESDEVDLGGNAKLMAP 420 (598)
T ss_pred HHHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccc--cccccccccccCCCcceecch
Confidence 999999999999999 99999999999999 3443 57889999875332211 112222333345678889999
Q ss_pred cccCCCCC------CCcccchHHHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhcccc
Q 047768 890 EYGLGGEA------SMRGGVYSYGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRV 963 (1009)
Q Consensus 890 E~~~~~~~------~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~ 963 (1009)
|+....+- ..|+|.|+.|.+.||+++...||............+.+ ..+- .
T Consensus 421 Ei~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe------------~qLP-----------a 477 (598)
T KOG4158|consen 421 EIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQE------------SQLP-----------A 477 (598)
T ss_pred hhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhh------------hhCC-----------C
Confidence 98655321 45899999999999999999999752211111111111 1111 1
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 047768 964 RNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLC 998 (1009)
Q Consensus 964 ~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~ 998 (1009)
.+..++..+.+++...++.||.+|+++.-....|.
T Consensus 478 lp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 478 LPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred CcccCChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence 12244556789999999999999999877666653
No 436
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.77 E-value=2.3e-18 Score=175.19 Aligned_cols=140 Identities=21% Similarity=0.175 Sum_probs=110.5
Q ss_pred CCcccccCCceEEEEEEecCCeEEEEEEeecccccc--------------------------hHHHHHHHHHHHhcCCCC
Q 047768 706 SNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGG--------------------------SKSFAAECEALRSIRHRN 759 (1009)
Q Consensus 706 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~E~~~l~~l~h~n 759 (1009)
...||+|++|.||+|.+. +|+.||||+++...... ...+.+|.+.+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 467999999999999987 89999999997542110 112457899999999998
Q ss_pred cceEEeeeeccccCCCceEEEEEeccCCCCHHHH-HhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhh-cCCCCceecC
Q 047768 760 LIKIVTICSSIDFKGVDFKALVYEYMQNGSLEEW-LHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHH-HCQPPIVHGD 837 (1009)
Q Consensus 760 iv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivHrd 837 (1009)
+.....+.. ...++||||++++++... +... .++..+...++.+++.++.|+|+ . +|+|||
T Consensus 81 i~~p~~~~~-------~~~~lVmE~~~g~~~~~~~l~~~-------~~~~~~~~~i~~~l~~~l~~lH~~~---givHrD 143 (190)
T cd05145 81 VPVPEPILL-------KKNVLVMEFIGDDGSPAPRLKDV-------PLEEEEAEELYEQVVEQMRRLYQEA---GLVHGD 143 (190)
T ss_pred CCCceEEEe-------cCCEEEEEEecCCCchhhhhhhc-------cCCHHHHHHHHHHHHHHHHHHHHhC---CEecCC
Confidence 755444322 124799999988865433 3322 26788899999999999999999 8 999999
Q ss_pred CCCCceeeCCCCceEEeccccccccCC
Q 047768 838 LKPSNVLLDHDMVAHVSDFGLAKFLSA 864 (1009)
Q Consensus 838 lk~~Nill~~~~~~kl~DfGla~~~~~ 864 (1009)
|||+||+++ ++.++++|||+|+....
T Consensus 144 lkP~NIll~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 144 LSEYNILYH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred CChhhEEEE-CCCEEEEEcccceecCC
Confidence 999999999 88999999999986643
No 437
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.77 E-value=1.3e-20 Score=173.16 Aligned_cols=157 Identities=34% Similarity=0.522 Sum_probs=82.4
Q ss_pred ccCCCCCCeeeecCCcCCccCCccccCccccccccccccccCCCCCCCCcCCCcCcEEecccccccCCCchHHhhhccCC
Q 047768 90 VGNLSFLRYINIADNDFHGEIPDRIGNLFRLETLVLANNSFSGRIPTNLSHCSKLITFSAHRNNLVGEIPEELISRRLFN 169 (1009)
Q Consensus 90 ~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~ 169 (1009)
+.++++.+.|-||+|+++ .+|+.+..|.+|+.|++++|+++ .+|.+++.+++|+.|+++-|++.
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-------------- 92 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-------------- 92 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh--------------
Confidence 445566666777777777 66666777777777777777776 56666666666666666655543
Q ss_pred cCeEeecCccCCCCCCcccCCccccceeecccCccc-CCCCcccccccccccccccCccCCCCCCCcccCCChHHHHHhh
Q 047768 170 LQGLSVGDNQLTGQLPASIGNLSALRVIDIRTNRLW-GKIPITLSQLTSLAYLHVGDNHFSGTIPPSVYNISSLVEIYLY 248 (1009)
Q Consensus 170 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 248 (1009)
..|..|+.++.|++|||++|++. ..+|+.|..++.|+.|+|++|.+. .+|..++++++|+.|.+.
T Consensus 93 -------------~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lr 158 (264)
T KOG0617|consen 93 -------------ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLR 158 (264)
T ss_pred -------------cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeec
Confidence 34444444444555555444443 233444444444444444444443 444444444444444444
Q ss_pred CCccCCCCChhhccCCCcccceeccccccC
Q 047768 249 GNRFTGSLPIEIGKNLPNLRNFVIYTNNFT 278 (1009)
Q Consensus 249 ~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~ 278 (1009)
.|.+. ++|.+++. +..|++|.+.+|+++
T Consensus 159 dndll-~lpkeig~-lt~lrelhiqgnrl~ 186 (264)
T KOG0617|consen 159 DNDLL-SLPKEIGD-LTRLRELHIQGNRLT 186 (264)
T ss_pred cCchh-hCcHHHHH-HHHHHHHhcccceee
Confidence 44443 34443332 333333333333333
No 438
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.76 E-value=3.6e-18 Score=169.44 Aligned_cols=192 Identities=16% Similarity=0.084 Sum_probs=137.9
Q ss_pred ccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc----chHHHHHHHHHHHhcC-CCCcceEEeeeeccccCCCceE
Q 047768 704 SSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG----GSKSFAAECEALRSIR-HRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 704 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
.+...|++|+||+||.+.. .+.+++.+.++....- ....+.+|+++|+++. |+++.+++++ ...
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~---------~~~ 73 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW---------DGR 73 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE---------cCE
Confidence 4567899999999997765 5778887777543321 1125789999999995 5889999886 345
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCC-CCCceeeCCCCceEEeccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDL-KPSNVLLDHDMVAHVSDFG 857 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdl-k~~Nill~~~~~~kl~DfG 857 (1009)
+++|||+.|.+|.+.... ....++.+++.++.++|+. ||||||| ||+||+++.++.++|+|||
T Consensus 74 ~lvmeyI~G~~L~~~~~~-------------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG 137 (218)
T PRK12274 74 HLDRSYLAGAAMYQRPPR-------------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQ 137 (218)
T ss_pred EEEEeeecCccHHhhhhh-------------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECC
Confidence 899999999998654321 1134778999999999999 9999999 7999999999999999999
Q ss_pred cccccCCCCCC-Ccc---ccCCc-cccccccccccCccccCCC-CCC-CcccchHHHHHHHHHHhCCCCCcc
Q 047768 858 LAKFLSASPLG-NVV---ETPSS-SIGVKGTIGYVAPEYGLGG-EAS-MRGGVYSYGILLLEIFTRRRPTES 922 (1009)
Q Consensus 858 la~~~~~~~~~-~~~---~~~~~-~~~~~gt~~y~aPE~~~~~-~~~-~~~DvwS~Gvvl~elltg~~p~~~ 922 (1009)
+|........- ... +.... ......++.|++|+...-- ..+ .+.+-++-|.-+|.++||+.|..+
T Consensus 138 ~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 138 LAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred CceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 99865432200 000 00000 0112357778888742221 222 556888999999999999998764
No 439
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.75 E-value=3.6e-20 Score=206.52 Aligned_cols=220 Identities=25% Similarity=0.277 Sum_probs=119.7
Q ss_pred hhcccccccceEEccCCCCCCcCchhhhhhcc--cceEEEcCCCcccc----CCCccccCc-CccCEEEccCCCCCCCCC
Q 047768 337 DLLTNCTKLQYLYLADNGFGGVLPHSIANLST--ALIDFNLGKNQIYG----TIPPGIANL-VNLNSLRMEANRLTGTIP 409 (1009)
Q Consensus 337 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~--~L~~L~L~~N~l~~----~~p~~~~~l-~~L~~L~L~~N~l~~~~p 409 (1009)
..+..+++|++|++++|.+.+..+..+..+.. .|++|++++|++++ .+...+..+ ++|+.|++++|.+++..+
T Consensus 75 ~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~ 154 (319)
T cd00116 75 QGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASC 154 (319)
T ss_pred HHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHH
Confidence 44556677777777777776555555544422 15555555555542 112223333 455555555555542111
Q ss_pred CCcCCcccccceecccccccCCCCcccccccccccccccCcccccc----cCCCCCCCCCccccccCCCCccCCCchhhh
Q 047768 410 HVIGELKNLQLLHLHANFLQGTIPSSLGNLTLLTYLSFGANNLQGN----IPFSLGNCKNLMFFFAPRNKLTGALPQQIL 485 (1009)
Q Consensus 410 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~ 485 (1009)
. .++..+..++.|++|++++|.+++. ++..+..+++|+.|++++|.+++....
T Consensus 155 ~--------------------~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~--- 211 (319)
T cd00116 155 E--------------------ALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGAS--- 211 (319)
T ss_pred H--------------------HHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHH---
Confidence 1 1122233334455555555544421 112222233444444444433311111
Q ss_pred hhccceeeEecCCCccCCCCCCCccCCCCCCeeeccccccCCCccccccC-----CCCccEEEecCcccc----cccccc
Q 047768 486 EITTLSLSLDLSDNLLNGSLPLGVGNLKSLVRLGIARNQFSGQIPVTLGA-----CTSLEYVELQGNSFS----GTIPQS 556 (1009)
Q Consensus 486 ~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~----~~~p~~ 556 (1009)
.++..+..+++|++|++++|.+++.....+.. .+.|+.|++++|.++ ..+...
T Consensus 212 ------------------~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~ 273 (319)
T cd00116 212 ------------------ALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEV 273 (319)
T ss_pred ------------------HHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHH
Confidence 11223455678888888888887533333322 378888888888886 234455
Q ss_pred cccccccceEcCCCcccccc----cccccccc-cccCceecccccC
Q 047768 557 LSSLTSIKELDLSQNNFSGQ----IPKYLENL-SFLQYLNLSYNHF 597 (1009)
Q Consensus 557 ~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l-~~L~~L~ls~N~l 597 (1009)
+..+++|+++|+++|.++.. +...+... +.|+.+|+.+|++
T Consensus 274 ~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 274 LAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 66678899999999999844 45555555 7888888888864
No 440
>PLN03150 hypothetical protein; Provisional
Probab=99.74 E-value=5.9e-18 Score=202.00 Aligned_cols=157 Identities=31% Similarity=0.518 Sum_probs=132.6
Q ss_pred hcCChhhHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCccceeeCCC--C--CeEEEEEeecCCcccccCccccCCCCC
Q 047768 21 ALSNETDCLSLLAIKSQLHDPLGVTSSWNRSACVNLCQHWTGVTCGRR--N--QRVTKLDLRNQSIGGILSPYVGNLSFL 96 (1009)
Q Consensus 21 ~~~~~~d~~aLl~~k~~~~~~~~~~~sW~~~~~~~~c~~w~gv~C~~~--~--~~v~~l~l~~~~l~~~~~~~~~~l~~L 96 (1009)
..+.++|..||++||+++.+|.. .+|+++.|.+.++.|.||.|+.. . .+|+.|+|+++++.|.+|+.++.+++|
T Consensus 367 ~~t~~~~~~aL~~~k~~~~~~~~--~~W~g~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~L 444 (623)
T PLN03150 367 SKTLLEEVSALQTLKSSLGLPLR--FGWNGDPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHL 444 (623)
T ss_pred cccCchHHHHHHHHHHhcCCccc--CCCCCCCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCCC
Confidence 34567899999999999877643 48988777655558999999532 2 369999999999999999999999999
Q ss_pred CeeeecCCcCCccCCccccCccccccccccccccCCCCCCCCcCCCcCcEEecccccccCCCchHHhhhccCCcCeEeec
Q 047768 97 RYINIADNDFHGEIPDRIGNLFRLETLVLANNSFSGRIPTNLSHCSKLITFSAHRNNLVGEIPEELISRRLFNLQGLSVG 176 (1009)
Q Consensus 97 ~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~ 176 (1009)
++|+|++|.++|.+|..++.+++|+.|||++|+++|.+|..++++++|++|+|++|+++|.+|..+. ..+.++..+++.
T Consensus 445 ~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~-~~~~~~~~l~~~ 523 (623)
T PLN03150 445 QSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALG-GRLLHRASFNFT 523 (623)
T ss_pred CEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHh-hccccCceEEec
Confidence 9999999999999999999999999999999999999999999999999999999999999888764 223455566666
Q ss_pred CccC
Q 047768 177 DNQL 180 (1009)
Q Consensus 177 ~n~l 180 (1009)
+|..
T Consensus 524 ~N~~ 527 (623)
T PLN03150 524 DNAG 527 (623)
T ss_pred CCcc
Confidence 6653
No 441
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.74 E-value=3.2e-18 Score=179.45 Aligned_cols=240 Identities=21% Similarity=0.250 Sum_probs=149.1
Q ss_pred cCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc---chHHHHHHHHHHHhcC----------CCCcceEEeeee
Q 047768 702 EFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG---GSKSFAAECEALRSIR----------HRNLIKIVTICS 768 (1009)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~----------h~niv~l~~~~~ 768 (1009)
.+...+.||.|+++.||.+++.++++++|||++...... ..+.+++|.-....+. |-.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 445567899999999999999999999999999655422 2345666554443321 222222222221
Q ss_pred ccc-------cCCCc-----eEEEEEeccCCCCHHHHHhc---cCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 047768 769 SID-------FKGVD-----FKALVYEYMQNGSLEEWLHQ---RDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPI 833 (1009)
Q Consensus 769 ~~~-------~~~~~-----~~~lv~e~~~~gsL~~~l~~---~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~i 833 (1009)
... ..+.. ..+++|+-+ .+||.+++.. .... ...+....+..+..|+.+.+++||+. |+
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~--~~~l~~~arl~lT~Q~I~lvA~Lh~~---Gl 166 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQT--HSPLAFAARLSLTVQMIRLVANLHSY---GL 166 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTT--SHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccc--cchhHHHHHHHHHHHHHHHHHHHhhc---ce
Confidence 110 00001 235677777 6688887653 2211 11234455677889999999999999 99
Q ss_pred eecCCCCCceeeCCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCC--------CCCCCcccchH
Q 047768 834 VHGDLKPSNVLLDHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLG--------GEASMRGGVYS 905 (1009)
Q Consensus 834 vHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwS 905 (1009)
||+||+|+|++++.+|.++++||+.....+... .....+..|.+||.... -.++.+.|.|+
T Consensus 167 VHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~-----------~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~ 235 (288)
T PF14531_consen 167 VHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRY-----------RCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQ 235 (288)
T ss_dssp EEST-SGGGEEE-TTS-EEE--GGGEEETTEEE-----------EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHH
T ss_pred EecccceeeEEEcCCCCEEEcChHHHeecCcee-----------eccCCCcccCChhhhhhhcccCcccceeeeccCHHH
Confidence 999999999999999999999999877554311 11234578999997533 25788999999
Q ss_pred HHHHHHHHHhCCCCCcccccCCccHHHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCC
Q 047768 906 YGILLLEIFTRRRPTESMFNEGLTLHEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPF 985 (1009)
Q Consensus 906 ~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~ 985 (1009)
+|+++|.|+.|+.||+.......... .++.| . +.++.+..++...++.+|.
T Consensus 236 LG~~ly~lWC~~lPf~~~~~~~~~~~-------------~f~~C---------------~-~~Pe~v~~LI~~lL~~~~~ 286 (288)
T PF14531_consen 236 LGITLYSLWCGRLPFGLSSPEADPEW-------------DFSRC---------------R-DMPEPVQFLIRGLLQRNPE 286 (288)
T ss_dssp HHHHHHHHHHSS-STCCCGGGSTSGG-------------GGTTS---------------S----HHHHHHHHHHT-SSGG
T ss_pred HHHHHHHHHHccCCCCCCCccccccc-------------cchhc---------------C-CcCHHHHHHHHHHccCCcc
Confidence 99999999999999985432211100 11111 1 4456688999999999999
Q ss_pred CC
Q 047768 986 DR 987 (1009)
Q Consensus 986 ~R 987 (1009)
+|
T Consensus 287 ~R 288 (288)
T PF14531_consen 287 DR 288 (288)
T ss_dssp GS
T ss_pred cC
Confidence 88
No 442
>PRK10345 hypothetical protein; Provisional
Probab=99.73 E-value=3.2e-17 Score=166.94 Aligned_cols=139 Identities=18% Similarity=0.272 Sum_probs=107.6
Q ss_pred ccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhc-----CCCCcceEEeeeeccccCCCce-
Q 047768 704 SSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSI-----RHRNLIKIVTICSSIDFKGVDF- 777 (1009)
Q Consensus 704 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~~~~~~~- 777 (1009)
.-.+.||+|+||.||. +..++.. +||++........+.+.+|+++++.+ .||||++++|++... .+.+.
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~--~g~g~v 79 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETD--CGTGYV 79 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeC--CCCeEE
Confidence 3457899999999995 5555555 69998765444567899999999999 579999999997653 12233
Q ss_pred EEEEEec--cCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHH-HHHhhcCCCCceecCCCCCceeeCC----CCc
Q 047768 778 KALVYEY--MQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAV-EYLHHHCQPPIVHGDLKPSNVLLDH----DMV 850 (1009)
Q Consensus 778 ~~lv~e~--~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l-~~LH~~~~~~ivHrdlk~~Nill~~----~~~ 850 (1009)
..+|+|| +.+|+|.+++++.. +++. ..++.+++.++ +|||++ +||||||||+||+++. ++.
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~~~-------~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~ 147 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQCR-------YEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVI 147 (210)
T ss_pred EEEEecCCCCcchhHHHHHHccc-------ccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCc
Confidence 3478999 55799999997632 4444 35677888777 999999 9999999999999974 348
Q ss_pred eEEeccccc
Q 047768 851 AHVSDFGLA 859 (1009)
Q Consensus 851 ~kl~DfGla 859 (1009)
++|+||+.+
T Consensus 148 ~~LiDg~G~ 156 (210)
T PRK10345 148 PVVCDNIGE 156 (210)
T ss_pred EEEEECCCC
Confidence 999995544
No 443
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.71 E-value=1.5e-19 Score=201.43 Aligned_cols=284 Identities=21% Similarity=0.247 Sum_probs=131.1
Q ss_pred cccccccccC-CCCCCCCcCCCcCcEEecccccccCCCchHHh--hhccCCcCeEeecCccCCC------CCCcccCCcc
Q 047768 122 TLVLANNSFS-GRIPTNLSHCSKLITFSAHRNNLVGEIPEELI--SRRLFNLQGLSVGDNQLTG------QLPASIGNLS 192 (1009)
Q Consensus 122 ~L~Ls~N~l~-~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~--~~~l~~L~~L~L~~n~l~~------~~p~~~~~l~ 192 (1009)
.|+|+.+.++ ...+..+..+.+|+.|+++.+.++..-...+. ....++|++|+++++.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4667777776 33444555566666666666666432111111 0233445566666555541 1223344455
Q ss_pred ccceeecccCcccCCCCcccccccc---cccccccCccCCCC----CCCcccCCChHHHHHhhCCccCCCCChhhccCCC
Q 047768 193 ALRVIDIRTNRLWGKIPITLSQLTS---LAYLHVGDNHFSGT----IPPSVYNISSLVEIYLYGNRFTGSLPIEIGKNLP 265 (1009)
Q Consensus 193 ~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~ 265 (1009)
+|+.|++++|.+.+..+..+..+.+ |++|++++|++++. +...+..+ .+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~------------------------~~ 137 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDL------------------------PP 137 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhC------------------------CC
Confidence 5555555555554444444444333 55555555554420 11111222 14
Q ss_pred cccceeccccccCCC----CCCCcCccccccccccccccccccc----ccccccccccccccccccccCCCCCCCcchhh
Q 047768 266 NLRNFVIYTNNFTGS----LPDSFSNASNLEVLHLAENQFRGQV----SINFNGLKDLSMLGLATNFLGNGAANDLDFVD 337 (1009)
Q Consensus 266 ~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~----~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 337 (1009)
+|+.|++++|.+++. ++..+..+++|++|++++|.+++.. ...+...++|+.|++++|.+..... ..+..
T Consensus 138 ~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~--~~l~~ 215 (319)
T cd00116 138 ALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGA--SALAE 215 (319)
T ss_pred CceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHH--HHHHH
Confidence 555555555555521 2233445556666666666655311 1122233345555555554432211 11223
Q ss_pred hcccccccceEEccCCCCCCcCchhhhhhcccceEEEcCCCccccCCCccccCcCccCEEEccCCCCCC----CCCCCcC
Q 047768 338 LLTNCTKLQYLYLADNGFGGVLPHSIANLSTALIDFNLGKNQIYGTIPPGIANLVNLNSLRMEANRLTG----TIPHVIG 413 (1009)
Q Consensus 338 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~----~~p~~~~ 413 (1009)
.+..+++|++|++++|.+++.....+.... ....+.|+.|++++|.++. .+...+.
T Consensus 216 ~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~--------------------~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~ 275 (319)
T cd00116 216 TLASLKSLEVLNLGDNNLTDAGAAALASAL--------------------LSPNISLLTLSLSCNDITDDGAKDLAEVLA 275 (319)
T ss_pred HhcccCCCCEEecCCCcCchHHHHHHHHHH--------------------hccCCCceEEEccCCCCCcHHHHHHHHHHh
Confidence 445556666666666666543222222211 0012455555555555541 1222333
Q ss_pred CcccccceecccccccCC----CCcccccc-cccccccccCcc
Q 047768 414 ELKNLQLLHLHANFLQGT----IPSSLGNL-TLLTYLSFGANN 451 (1009)
Q Consensus 414 ~l~~L~~L~L~~N~l~~~----~p~~~~~l-~~L~~L~L~~N~ 451 (1009)
.+++|+++++++|.++.. ....+... +.|++|++.+|.
T Consensus 276 ~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 276 EKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDS 318 (319)
T ss_pred cCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCC
Confidence 445566666666666532 22222333 456666666554
No 444
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.71 E-value=5e-17 Score=193.44 Aligned_cols=198 Identities=23% Similarity=0.283 Sum_probs=155.3
Q ss_pred HHHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcC---CCCcceEEeeeeccccC
Q 047768 697 SKATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIR---HRNLIKIVTICSSIDFK 773 (1009)
Q Consensus 697 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~ 773 (1009)
......|.+.+.+|+|+||.||+|.... |+.||+|+-+.. ...+|.--.+++.+++ -+.|..+..++. +.
T Consensus 694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~---~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~---~~ 766 (974)
T KOG1166|consen 694 EVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPP---NPWEFYICLQVMERLKPQMLPSIMHISSAHV---FQ 766 (974)
T ss_pred eecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCC---CceeeeehHHHHHhhchhhhcchHHHHHHHc---cC
Confidence 3445678888999999999999999874 999999986433 2344444445556665 122333332221 22
Q ss_pred CCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCC------
Q 047768 774 GVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDH------ 847 (1009)
Q Consensus 774 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~------ 847 (1009)
+.-++|+||.+.|+|.+++...+ .++|.-+..+..|+++.+++||.. +|||+||||+|+++..
T Consensus 767 --~~S~lv~ey~~~Gtlld~~N~~~------~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~ 835 (974)
T KOG1166|consen 767 --NASVLVSEYSPYGTLLDLINTNK------VMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADS 835 (974)
T ss_pred --CcceeeeeccccccHHHhhccCC------CCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCC
Confidence 44579999999999999998544 389999999999999999999999 9999999999999942
Q ss_pred -CCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCC
Q 047768 848 -DMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRR 918 (1009)
Q Consensus 848 -~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~ 918 (1009)
...++|+|||.+.++..-+. .....+.++|-.+-.+|...+..++.++|.|.++.+++-|+.|+.
T Consensus 836 ~~~~l~lIDfG~siDm~lfp~------~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 836 DSKGLYLIDFGRSIDMKLFPD------GTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred cccceEEEecccceeeeEcCC------CcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 34699999999987754321 124456788999999999999999999999999999999999875
No 445
>smart00090 RIO RIO-like kinase.
Probab=99.70 E-value=9e-17 Score=168.19 Aligned_cols=145 Identities=19% Similarity=0.162 Sum_probs=112.8
Q ss_pred hccCccCCcccccCCceEEEEE-EecCCeEEEEEEeeccccc------------------------chHHHHHHHHHHHh
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGV-LHENGMLVAVKVINLEQKG------------------------GSKSFAAECEALRS 754 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~ 754 (1009)
..-|.+.+.||+|+||.||+|. ...+|+.||||+++..... ....+.+|++.+.+
T Consensus 27 ~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~ 106 (237)
T smart00090 27 GILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQR 106 (237)
T ss_pred CchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 3458889999999999999998 5568999999998643210 01235689999999
Q ss_pred cCCC--CcceEEeeeeccccCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCC
Q 047768 755 IRHR--NLIKIVTICSSIDFKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPP 832 (1009)
Q Consensus 755 l~h~--niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ 832 (1009)
+.+. .+.+++++ ...++||||++++++..+..... .....+...++.|++.++.|||+. +
T Consensus 107 L~~~~i~~p~~~~~---------~~~~lV~E~~~g~~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---g 168 (237)
T smart00090 107 LYEAGVPVPKPIAW---------RRNVLVMEFIGGDGLPAPRLKDV------EPEEEEEFELYDDILEEMRKLYKE---G 168 (237)
T ss_pred HHhcCCCCCeeeEe---------cCceEEEEEecCCcccccccccC------CcchHHHHHHHHHHHHHHHHHHhc---C
Confidence 9753 34444443 22479999999988876543322 255666789999999999999999 8
Q ss_pred -ceecCCCCCceeeCCCCceEEeccccccccC
Q 047768 833 -IVHGDLKPSNVLLDHDMVAHVSDFGLAKFLS 863 (1009)
Q Consensus 833 -ivHrdlk~~Nill~~~~~~kl~DfGla~~~~ 863 (1009)
|+||||||+||+++ ++.++++|||.|....
T Consensus 169 ~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 169 ELVHGDLSEYNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred CEEeCCCChhhEEEE-CCCEEEEEChhhhccC
Confidence 99999999999999 8899999999987543
No 446
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.68 E-value=1.1e-17 Score=185.63 Aligned_cols=187 Identities=25% Similarity=0.306 Sum_probs=152.6
Q ss_pred cccccCCceEEEEEE---ecCCeEEEEEEeeccccc--chHHHHHHHHHHHhcC-CCCcceEEeeeeccccCCCceEEEE
Q 047768 708 TIGRGSFGFVYKGVL---HENGMLVAVKVINLEQKG--GSKSFAAECEALRSIR-HRNLIKIVTICSSIDFKGVDFKALV 781 (1009)
Q Consensus 708 ~lg~G~~g~V~~~~~---~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~~lv 781 (1009)
.+|+|+||.|+.+.- .+.|..+|+|+.+..... .......|..++..++ ||.++++.-. ++.....+++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhya-----fqt~~kl~l~ 75 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYA-----FQTDGKLYLI 75 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeee-----eccccchhHh
Confidence 379999999997543 245778899888543221 1124456777888886 9999998765 3444678899
Q ss_pred EeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccc
Q 047768 782 YEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 861 (1009)
Q Consensus 782 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~ 861 (1009)
++|..+|++...+..... ++......+...++-+++++|+. +|+|||+|++||+++.+|++++.|||+.+.
T Consensus 76 ld~~rgg~lft~l~~~~~------f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske 146 (612)
T KOG0603|consen 76 LDFLRGGDLFTRLSKEVM------FDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKE 146 (612)
T ss_pred hhhcccchhhhccccCCc------hHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhH
Confidence 999999999988877664 77888888999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcc
Q 047768 862 LSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTES 922 (1009)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~ 922 (1009)
.-.... .+||..|||||++. ....++|-||||++++||+||..||..
T Consensus 147 ~v~~~~------------~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 147 AVKEKI------------ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred hHhhhh------------cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 643211 27999999999988 567789999999999999999999975
No 447
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.67 E-value=1.6e-17 Score=180.70 Aligned_cols=129 Identities=30% Similarity=0.500 Sum_probs=111.0
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
.+.++.|++|+..+|.+++..++.. ..-++.....++.|++.|++| + +.+|||+||.||+...+..+||.|
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~---e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgD 399 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTG---EERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGD 399 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcc---cccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhh
Confidence 3578999999999999999865542 347788899999999999999 6 899999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHh
Q 047768 856 FGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFT 915 (1009)
Q Consensus 856 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt 915 (1009)
||+........ ...+.....+...||..||+||.+.+..|+.++||||+|++++|+++
T Consensus 400 Fgl~ts~~~~~--~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 400 FGLVTSQDKDE--TVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred hhheeecccCC--cccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 99998776543 22223345566789999999999999999999999999999999997
No 448
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.64 E-value=1.5e-15 Score=155.93 Aligned_cols=144 Identities=24% Similarity=0.236 Sum_probs=111.1
Q ss_pred HHHHHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc----------------------chHHHHHHHHHH
Q 047768 695 ELSKATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG----------------------GSKSFAAECEAL 752 (1009)
Q Consensus 695 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l 752 (1009)
++......|.+.+.||+|+||.||+|... +|+.||||+++..... ......+|..++
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 33344445888899999999999999885 7999999987643210 012367788999
Q ss_pred HhcCCCC--cceEEeeeeccccCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 047768 753 RSIRHRN--LIKIVTICSSIDFKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQ 830 (1009)
Q Consensus 753 ~~l~h~n--iv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ 830 (1009)
.++.|++ +...++. ...++||||+++++|.+.... .....++.+++.++.++|+.
T Consensus 88 ~~l~~~~i~v~~~~~~---------~~~~lv~e~~~g~~L~~~~~~------------~~~~~~~~~i~~~l~~lh~~-- 144 (198)
T cd05144 88 KALYEEGFPVPKPIDW---------NRHAVVMEYIDGVELYRVRVL------------EDPEEVLDEILEEIVKAYKH-- 144 (198)
T ss_pred HHHHHcCCCCCceeec---------CCceEEEEEeCCcchhhcccc------------ccHHHHHHHHHHHHHHHHHC--
Confidence 9998774 4444432 345899999999998765321 23456889999999999998
Q ss_pred CCceecCCCCCceeeCCCCceEEeccccccccC
Q 047768 831 PPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLS 863 (1009)
Q Consensus 831 ~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~ 863 (1009)
+|+||||||+||++++++.++|+|||++....
T Consensus 145 -gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 145 -GIIHGDLSEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred -CCCcCCCCcccEEEcCCCcEEEEECCccccCC
Confidence 99999999999999999999999999996543
No 449
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.63 E-value=2.7e-15 Score=156.11 Aligned_cols=134 Identities=23% Similarity=0.345 Sum_probs=109.8
Q ss_pred CcccccCCceEEEEEEecCCeEEEEEEeeccccc--------chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceE
Q 047768 707 NTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG--------GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFK 778 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 778 (1009)
+.||+|++|.||+|.+ .|..|+||+....... ....+.+|++++..++|+++.....++... ...
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-----~~~ 74 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP-----ENF 74 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC-----CCC
Confidence 5799999999999987 5778999986533211 123577899999999999887666654322 456
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccc
Q 047768 779 ALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 858 (1009)
Q Consensus 779 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGl 858 (1009)
++||||+++++|.+++.... . ++..++.+++.++.++|+. +++|||++|+||+++ ++.++++|||.
T Consensus 75 ~lv~e~~~G~~L~~~~~~~~---------~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~ 140 (211)
T PRK14879 75 IIVMEYIEGEPLKDLINSNG---------M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGL 140 (211)
T ss_pred EEEEEEeCCcCHHHHHHhcc---------H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCc
Confidence 89999999999999986532 2 7788999999999999999 999999999999999 78999999998
Q ss_pred ccc
Q 047768 859 AKF 861 (1009)
Q Consensus 859 a~~ 861 (1009)
++.
T Consensus 141 a~~ 143 (211)
T PRK14879 141 AEF 143 (211)
T ss_pred ccC
Confidence 863
No 450
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.62 E-value=2.2e-16 Score=183.45 Aligned_cols=172 Identities=30% Similarity=0.375 Sum_probs=127.2
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
..+|..++.+..|+||.||..+++.+.+++|+|+=+ + .- +++ ||..+.+ ..+
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNk-q-----~l------ilR-----nilt~a~-----------npf 133 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINK-Q-----NL------ILR-----NILTFAG-----------NPF 133 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccc-c-----ch------hhh-----ccccccC-----------Ccc
Confidence 357888999999999999999999899999995421 1 11 111 2333322 223
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+| |+..+.++..+. ++. +++.+++|+|+. +|||||+||+|.+|+.-|++|++|||+.
T Consensus 134 vv------gDc~tllk~~g~------lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLs 190 (1205)
T KOG0606|consen 134 VV------GDCATLLKNIGP------LPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLS 190 (1205)
T ss_pred ee------chhhhhcccCCC------Ccc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhh
Confidence 33 666666665442 332 237889999999 9999999999999999999999999998
Q ss_pred cccCCCCCCCc-------cccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCCcc
Q 047768 860 KFLSASPLGNV-------VETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPTES 922 (1009)
Q Consensus 860 ~~~~~~~~~~~-------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~ 922 (1009)
+..--...... ....-.....+||+.|+|||++....|+..+|.|++|+++||.+.|+.||..
T Consensus 191 k~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffG 260 (1205)
T KOG0606|consen 191 KKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFG 260 (1205)
T ss_pred hhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccC
Confidence 76432111000 0011122356899999999999999999999999999999999999999874
No 451
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.60 E-value=4.2e-15 Score=176.10 Aligned_cols=137 Identities=27% Similarity=0.325 Sum_probs=108.4
Q ss_pred hccCccCCcccccCCceEEEEEEecCCeEEEEEEeecc--cc------cchHHHHHHHHHHHhcCCCCcceEEeeeeccc
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLE--QK------GGSKSFAAECEALRSIRHRNLIKIVTICSSID 771 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 771 (1009)
...|...+.||+|+||+||+|.+. +..+++|+.... .. ...+.+.+|++++++++|++++....++...
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~- 408 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP- 408 (535)
T ss_pred ccccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC-
Confidence 345566789999999999999885 334555543211 11 1124688999999999999998877665432
Q ss_pred cCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCce
Q 047768 772 FKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 851 (1009)
Q Consensus 772 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~ 851 (1009)
...++||||+++++|.+++. ....++.++++++.|||+. +++|||+||+||++ .++.+
T Consensus 409 ----~~~~lv~E~~~g~~L~~~l~--------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~ 466 (535)
T PRK09605 409 ----EEKTIVMEYIGGKDLKDVLE--------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRL 466 (535)
T ss_pred ----CCCEEEEEecCCCcHHHHHH--------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcE
Confidence 34689999999999999875 2356899999999999999 99999999999999 67899
Q ss_pred EEeccccccc
Q 047768 852 HVSDFGLAKF 861 (1009)
Q Consensus 852 kl~DfGla~~ 861 (1009)
+|+|||+++.
T Consensus 467 ~liDFGla~~ 476 (535)
T PRK09605 467 YLIDFGLGKY 476 (535)
T ss_pred EEEeCccccc
Confidence 9999999974
No 452
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.59 E-value=8e-15 Score=151.03 Aligned_cols=130 Identities=25% Similarity=0.382 Sum_probs=102.7
Q ss_pred cccccCCceEEEEEEecCCeEEEEEEeeccccc--------chHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEE
Q 047768 708 TIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG--------GSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKA 779 (1009)
Q Consensus 708 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 779 (1009)
.||+|+||.||+|.+ ++..|++|+....... ....+.+|+++++.++|+++.....++.. ....+
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~-----~~~~~ 73 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVD-----PDNKT 73 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE-----CCCCE
Confidence 389999999999986 5788999986432211 12457789999999988765444433322 13458
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 780 LVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 780 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
+||||+++++|.+++.... . .++.+++.++.++|+. +++|||++|+||+++ ++.++++|||.+
T Consensus 74 lv~e~~~g~~l~~~~~~~~-------~------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a 136 (199)
T TIGR03724 74 IVMEYIEGKPLKDVIEEGN-------D------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLG 136 (199)
T ss_pred EEEEEECCccHHHHHhhcH-------H------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCC
Confidence 9999999999998875421 1 7899999999999999 999999999999999 899999999988
Q ss_pred cc
Q 047768 860 KF 861 (1009)
Q Consensus 860 ~~ 861 (1009)
+.
T Consensus 137 ~~ 138 (199)
T TIGR03724 137 KY 138 (199)
T ss_pred cC
Confidence 64
No 453
>PLN03150 hypothetical protein; Provisional
Probab=99.55 E-value=6.5e-15 Score=176.00 Aligned_cols=112 Identities=38% Similarity=0.639 Sum_probs=84.5
Q ss_pred CCeeeccccccCCCccccccCCCCccEEEecCcccccccccccccccccceEcCCCcccccccccccccccccCceeccc
Q 047768 515 LVRLGIARNQFSGQIPVTLGACTSLEYVELQGNSFSGTIPQSLSSLTSIKELDLSQNNFSGQIPKYLENLSFLQYLNLSY 594 (1009)
Q Consensus 515 L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~ 594 (1009)
++.|+|++|.++|.+|..++.+++|+.|+|++|+|+|.+|..++.+++|+.|||++|+++|.+|..++++++|++|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 56777777777777777777788888888888888777887788888888888888888887888888888888888888
Q ss_pred ccCcccCCCC--CcccCccccccccCCCcCCCCC
Q 047768 595 NHFEGEVPTK--GIFKNKTGFSIVGNGKLCGGLD 626 (1009)
Q Consensus 595 N~l~g~~p~~--~~~~~~~~~~~~~n~~lc~~~~ 626 (1009)
|+++|.+|.. ..+.......+.+|+.+||.+.
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~ 533 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG 533 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCccccCCCC
Confidence 8888887763 1122334566788889998653
No 454
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.54 E-value=4e-16 Score=169.34 Aligned_cols=176 Identities=28% Similarity=0.429 Sum_probs=130.0
Q ss_pred ccccceecccccccCCCCcccccccccccccccCcccccccCCCCCCCCCccccccCCCCccCCCchhhhhhccceeeEe
Q 047768 416 KNLQLLHLHANFLQGTIPSSLGNLTLLTYLSFGANNLQGNIPFSLGNCKNLMFFFAPRNKLTGALPQQILEITTLSLSLD 495 (1009)
Q Consensus 416 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~L~ 495 (1009)
..-...||+.|++. .+|..++.+..|+.+.|.+|.+. .+|..++++..|++++++.|+++ .+|..++.+.-. .|-
T Consensus 75 tdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lpLk--vli 149 (722)
T KOG0532|consen 75 TDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLPLK--VLI 149 (722)
T ss_pred cchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCcce--eEE
Confidence 33344555555555 45555555555555555555555 45555555555555555555555 455544443211 277
Q ss_pred cCCCccCCCCCCCccCCCCCCeeeccccccCCCccccccCCCCccEEEecCcccccccccccccccccceEcCCCccccc
Q 047768 496 LSDNLLNGSLPLGVGNLKSLVRLGIARNQFSGQIPVTLGACTSLEYVELQGNSFSGTIPQSLSSLTSIKELDLSQNNFSG 575 (1009)
Q Consensus 496 Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 575 (1009)
+++|+++ .+|..++.+..|..||.+.|++. .+|..++++.+|+.|++..|++. .+|..++.| .|..||+|.|+++
T Consensus 150 ~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis- 224 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS- 224 (722)
T ss_pred EecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-
Confidence 7888887 78999999999999999999998 78999999999999999999998 778888865 4899999999998
Q ss_pred ccccccccccccCceecccccCcccC
Q 047768 576 QIPKYLENLSFLQYLNLSYNHFEGEV 601 (1009)
Q Consensus 576 ~~p~~~~~l~~L~~L~ls~N~l~g~~ 601 (1009)
.||-.|.+|+.|++|-|.+|+|+.+.
T Consensus 225 ~iPv~fr~m~~Lq~l~LenNPLqSPP 250 (722)
T KOG0532|consen 225 YLPVDFRKMRHLQVLQLENNPLQSPP 250 (722)
T ss_pred ecchhhhhhhhheeeeeccCCCCCCh
Confidence 89999999999999999999998543
No 455
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.53 E-value=4.7e-14 Score=143.67 Aligned_cols=136 Identities=23% Similarity=0.265 Sum_probs=97.7
Q ss_pred CCcccccCCceEEEEEEecCCeEEEEEEeecccccc--hHH----------------------HHHHHHHHHhcCCC--C
Q 047768 706 SNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGG--SKS----------------------FAAECEALRSIRHR--N 759 (1009)
Q Consensus 706 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~----------------------~~~E~~~l~~l~h~--n 759 (1009)
.+.||+|+||+||+|... +|+.||||+++...... ... ...|.+.+.++.+. .
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999986 78999999986432211 111 13455566666433 2
Q ss_pred cceEEeeeeccccCCCceEEEEEeccCCCCHHH-HHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhh-cCCCCceecC
Q 047768 760 LIKIVTICSSIDFKGVDFKALVYEYMQNGSLEE-WLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHH-HCQPPIVHGD 837 (1009)
Q Consensus 760 iv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivHrd 837 (1009)
+.+.+++ ...++||||++++++.. .+.... .. .+...++.+++.++.++|. . +|+|||
T Consensus 81 ~~~~~~~---------~~~~lv~e~~~g~~~~~~~l~~~~-------~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~D 140 (187)
T cd05119 81 VPKPIDL---------NRHVLVMEFIGGDGIPAPRLKDVR-------LL-EDPEELYDQILELMRKLYREA---GLVHGD 140 (187)
T ss_pred CCceEec---------CCCEEEEEEeCCCCccChhhhhhh-------hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCC
Confidence 4444443 23589999999854321 111111 11 4567899999999999999 7 999999
Q ss_pred CCCCceeeCCCCceEEeccccccccC
Q 047768 838 LKPSNVLLDHDMVAHVSDFGLAKFLS 863 (1009)
Q Consensus 838 lk~~Nill~~~~~~kl~DfGla~~~~ 863 (1009)
|||+||+++ ++.++++|||.+....
T Consensus 141 l~p~Nili~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 141 LSEYNILVD-DGKVYIIDVPQAVEID 165 (187)
T ss_pred CChhhEEEE-CCcEEEEECccccccc
Confidence 999999999 9999999999997554
No 456
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.49 E-value=3.6e-13 Score=141.45 Aligned_cols=139 Identities=17% Similarity=0.136 Sum_probs=105.6
Q ss_pred CCccc-ccCCceEEEEEEecCCeEEEEEEeeccc-------------ccchHHHHHHHHHHHhcCCCCc--ceEEeeeec
Q 047768 706 SNTIG-RGSFGFVYKGVLHENGMLVAVKVINLEQ-------------KGGSKSFAAECEALRSIRHRNL--IKIVTICSS 769 (1009)
Q Consensus 706 ~~~lg-~G~~g~V~~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~ 769 (1009)
...+| .|+.|+||.+... +..+|||.+.... ......+.+|++++.+++|+++ ++.+++...
T Consensus 36 ~~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV 113 (239)
T ss_pred CceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence 35687 8999999999774 7789999885311 1123567889999999998775 667766432
Q ss_pred cccCCCceEEEEEeccCC-CCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCC
Q 047768 770 IDFKGVDFKALVYEYMQN-GSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHD 848 (1009)
Q Consensus 770 ~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~ 848 (1009)
. .......++|+||+++ .+|.+++.... ++.. .+.+++.++.+||+. ||+||||||+|||++.+
T Consensus 114 ~-~~~~~~~~lV~e~l~G~~~L~~~l~~~~-------l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~ 178 (239)
T PRK01723 114 R-HGLFYRADILIERIEGARDLVALLQEAP-------LSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPD 178 (239)
T ss_pred e-cCcceeeeEEEEecCCCCCHHHHHhcCC-------CCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCC
Confidence 1 1111234699999997 69999886532 4443 356899999999999 99999999999999999
Q ss_pred CceEEeccccccc
Q 047768 849 MVAHVSDFGLAKF 861 (1009)
Q Consensus 849 ~~~kl~DfGla~~ 861 (1009)
+.++++|||.++.
T Consensus 179 ~~v~LIDfg~~~~ 191 (239)
T PRK01723 179 GKFWLIDFDRGEL 191 (239)
T ss_pred CCEEEEECCCccc
Confidence 9999999998874
No 457
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.48 E-value=1.4e-15 Score=165.18 Aligned_cols=178 Identities=29% Similarity=0.452 Sum_probs=116.8
Q ss_pred EEEcCCCccccCCCccccCcCccCEEEccCCCCCCCCCCCcCCcccccceecccccccCCCCcccccccccccccccCcc
Q 047768 372 DFNLGKNQIYGTIPPGIANLVNLNSLRMEANRLTGTIPHVIGELKNLQLLHLHANFLQGTIPSSLGNLTLLTYLSFGANN 451 (1009)
Q Consensus 372 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 451 (1009)
..||+.|++. .+|..+..+..|+.+.|.+|.|. .+|..++++..|++|||+.|+++ ..|..++.|+ |+.|-+++|+
T Consensus 79 ~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNk 154 (722)
T KOG0532|consen 79 FADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNK 154 (722)
T ss_pred hhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCc
Confidence 3455555555 55666666666666666666666 66666666666666666666666 5566666555 6666666666
Q ss_pred cccccCCCCCCCCCccccccCCCCccCCCchhhhhhccceeeEecCCCccCCCCCCCccCCCCCCeeeccccccCCCccc
Q 047768 452 LQGNIPFSLGNCKNLMFFFAPRNKLTGALPQQILEITTLSLSLDLSDNLLNGSLPLGVGNLKSLVRLGIARNQFSGQIPV 531 (1009)
Q Consensus 452 l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 531 (1009)
++ .+|..++.+..|.. ||.+.|++. .+|..++++.+|+.|.+..|++. .+|+
T Consensus 155 l~-~lp~~ig~~~tl~~-------------------------ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~ 206 (722)
T KOG0532|consen 155 LT-SLPEEIGLLPTLAH-------------------------LDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPE 206 (722)
T ss_pred cc-cCCcccccchhHHH-------------------------hhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCH
Confidence 66 55665655555444 445555554 56667777777777777777776 5666
Q ss_pred cccCCCCccEEEecCcccccccccccccccccceEcCCCcccccccccccccc
Q 047768 532 TLGACTSLEYVELQGNSFSGTIPQSLSSLTSIKELDLSQNNFSGQIPKYLENL 584 (1009)
Q Consensus 532 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 584 (1009)
++. .-.|..||+|.|+++ .+|-.|.+|+.|++|-|.+|.|. ..|..++..
T Consensus 207 El~-~LpLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~k 256 (722)
T KOG0532|consen 207 ELC-SLPLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEK 256 (722)
T ss_pred HHh-CCceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHHHhc
Confidence 666 345777777777777 77777777777777777777776 556555433
No 458
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.46 E-value=3.8e-13 Score=131.86 Aligned_cols=136 Identities=21% Similarity=0.252 Sum_probs=110.9
Q ss_pred cCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCC--CCcceEEeeeeccccCCCceEEEEE
Q 047768 705 SSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRH--RNLIKIVTICSSIDFKGVDFKALVY 782 (1009)
Q Consensus 705 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~~~~~~lv~ 782 (1009)
+.+.+|+|.++.||++... +..+++|....... ...+.+|+..++.++| ..+.+++++... .+..++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~-----~~~~~~v~ 72 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGES-----DGWSYLLM 72 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCC-----CCccEEEE
Confidence 3577999999999999985 47899999854332 4678999999999976 588888877543 25689999
Q ss_pred eccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccccc
Q 047768 783 EYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 862 (1009)
Q Consensus 783 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~ 862 (1009)
||++++.+..+ +......++.+++++++++|.....+++|+|++|+||+++..+.++++|||.++..
T Consensus 73 e~~~g~~~~~~-------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 73 EWIEGETLDEV-------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred EecCCeecccC-------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 99988766543 34566778999999999999864457999999999999999999999999998743
No 459
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.46 E-value=8.3e-15 Score=172.16 Aligned_cols=257 Identities=22% Similarity=0.244 Sum_probs=183.9
Q ss_pred hccCccCCcccccCCceEEEEEEe-cCCeEEEEEEeeccc--ccchHHHHHHHHHHHhcC-CCCcceEEeeeeccccCCC
Q 047768 700 TNEFSSSNTIGRGSFGFVYKGVLH-ENGMLVAVKVINLEQ--KGGSKSFAAECEALRSIR-HRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~ 775 (1009)
...|...+.||+|+|+.|-.+... .....+|+|.+.... ....+....|..+=+.+. |+|++++++... ..
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~-----~~ 93 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSS-----SP 93 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccC-----CC
Confidence 346777788999999999888764 334567777765443 122344455777666675 999999998754 34
Q ss_pred ceEEEEEeccCCCCHHHHH-hccCCCCCccCCCHHHHHHHHHHHHHHHHHHh-hcCCCCceecCCCCCceeeCCCC-ceE
Q 047768 776 DFKALVYEYMQNGSLEEWL-HQRDDQLGICNLSLIQRLNIVIDVASAVEYLH-HHCQPPIVHGDLKPSNVLLDHDM-VAH 852 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l-~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH-~~~~~~ivHrdlk~~Nill~~~~-~~k 852 (1009)
...+++.||..++++.+.+ +.... ..+......+..|+..++.|+| .. ++.|||+||+|.+++..+ ..+
T Consensus 94 ~~~~~~~~~s~g~~~f~~i~~~~~~-----~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~ 165 (601)
T KOG0590|consen 94 RSYLLSLSYSDGGSLFSKISHPDST-----GTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALK 165 (601)
T ss_pred cccccccCcccccccccccccCCcc-----CCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCccc
Confidence 7789999999999998888 43321 2566677789999999999999 77 999999999999999999 999
Q ss_pred EeccccccccCCCCCCCccccCCccccccc-cccccCccccCCC-CCCCcccchHHHHHHHHHHhCCCCCcccccCCccH
Q 047768 853 VSDFGLAKFLSASPLGNVVETPSSSIGVKG-TIGYVAPEYGLGG-EASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTL 930 (1009)
Q Consensus 853 l~DfGla~~~~~~~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~ 930 (1009)
++|||+|..+.... .........+| ++.|+|||...+. ...+..|+||.|+++.-+++|..|+......+...
T Consensus 166 ~~df~~At~~~~~~-----g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~ 240 (601)
T KOG0590|consen 166 IADFGLATAYRNKN-----GAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRY 240 (601)
T ss_pred CCCchhhccccccC-----CcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccc
Confidence 99999998776511 11233344667 9999999998884 44788999999999999999999988665554343
Q ss_pred HHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 047768 931 HEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVV 994 (1009)
Q Consensus 931 ~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl 994 (1009)
..|........ . ..+. .......++...++..+|..|.+..++.
T Consensus 241 ~~~~~~~~~~~--------~----------~~~~--~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 241 SSWKSNKGRFT--------Q----------LPWN--SISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred eeecccccccc--------c----------Cccc--cCChhhhhcccccccCCchhcccccccc
Confidence 33332210000 0 0000 0111244666677778888888877764
No 460
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.40 E-value=5e-13 Score=136.28 Aligned_cols=162 Identities=22% Similarity=0.379 Sum_probs=123.0
Q ss_pred HHHhcCCCCcceEEeeeeccccCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 047768 751 ALRSIRHRNLIKIVTICSSIDFKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQ 830 (1009)
Q Consensus 751 ~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ 830 (1009)
-+-++.|.|+++++.|+++..+.+......+.|||..|++.++|++.... ...+......+|+-||..||.|||+ |.
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~--~~a~~~~~wkkw~tqIlsal~yLhs-~~ 196 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKN--QKALFQKAWKKWCTQILSALSYLHS-CD 196 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHh--hhhhhHHHHHHHHHHHHhhhhhhhc-cC
Confidence 34455799999999999887676667778899999999999999875432 3347778888999999999999998 58
Q ss_pred CCceecCCCCCceeeCCCCceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHH
Q 047768 831 PPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILL 910 (1009)
Q Consensus 831 ~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl 910 (1009)
|+|+|+++..+-|++..+|-+|+.---......... .. .........+-++|.|||+-.....+.++|||+||+..
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~--~~--~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcA 272 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVN--ST--REAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCA 272 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccccchhhh--hh--hHhhhhccccCCccccCCcCcccccccchhhhhhhHHH
Confidence 899999999999999999999984211111110000 00 00111123467899999997777788899999999999
Q ss_pred HHHHhCCCC
Q 047768 911 LEIFTRRRP 919 (1009)
Q Consensus 911 ~elltg~~p 919 (1009)
.||..+..-
T Consensus 273 lemailEiq 281 (458)
T KOG1266|consen 273 LEMAILEIQ 281 (458)
T ss_pred HHHHHheec
Confidence 999988663
No 461
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.38 E-value=3.3e-13 Score=154.77 Aligned_cols=181 Identities=35% Similarity=0.516 Sum_probs=103.7
Q ss_pred cCccCEEEccCCCCCCCCCCCcCCcc-cccceecccccccCCCCcccccccccccccccCcccccccCCCCCCCCCcccc
Q 047768 391 LVNLNSLRMEANRLTGTIPHVIGELK-NLQLLHLHANFLQGTIPSSLGNLTLLTYLSFGANNLQGNIPFSLGNCKNLMFF 469 (1009)
Q Consensus 391 l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l 469 (1009)
++.++.|++.+|.++ .+|.....+. +|+.|++++|++. .+|..++.+++|+.|++++|+++ .+|...+..++|+.|
T Consensus 115 ~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L 191 (394)
T COG4886 115 LTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNL 191 (394)
T ss_pred ccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhhe
Confidence 345555555555555 4444444443 5666666666665 44445556666666666666665 344444344444444
Q ss_pred ccCCCCccCCCchhhhhhccceeeEecCCCccCCCCCCCccCCCCCCeeeccccccCCCccccccCCCCccEEEecCccc
Q 047768 470 FAPRNKLTGALPQQILEITTLSLSLDLSDNLLNGSLPLGVGNLKSLVRLGIARNQFSGQIPVTLGACTSLEYVELQGNSF 549 (1009)
Q Consensus 470 ~l~~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 549 (1009)
++++|+++ .+|..+..+..|++|++++|.+. .++..+.++.++..|.+++|++
T Consensus 192 ~ls~N~i~--------------------------~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~ 244 (394)
T COG4886 192 DLSGNKIS--------------------------DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKL 244 (394)
T ss_pred eccCCccc--------------------------cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCcee
Confidence 44444433 33433344445666666666433 4556666666666666666666
Q ss_pred ccccccccccccccceEcCCCcccccccccccccccccCceecccccCcccCCCC
Q 047768 550 SGTIPQSLSSLTSIKELDLSQNNFSGQIPKYLENLSFLQYLNLSYNHFEGEVPTK 604 (1009)
Q Consensus 550 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~ 604 (1009)
. .++..++.+++|++|++++|+++ .++. ++.+.+|+.|++++|.+....|..
T Consensus 245 ~-~~~~~~~~l~~l~~L~~s~n~i~-~i~~-~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 245 E-DLPESIGNLSNLETLDLSNNQIS-SISS-LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred e-eccchhccccccceecccccccc-cccc-ccccCccCEEeccCccccccchhh
Confidence 5 33566666677777777777776 3333 666777777777777776655543
No 462
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.35 E-value=1.6e-12 Score=149.17 Aligned_cols=177 Identities=31% Similarity=0.468 Sum_probs=77.2
Q ss_pred cCeEeecCccCCCCCCcccCCcc-ccceeecccCcccCCCCcccccccccccccccCccCCCCCCCcccCCChHHHHHhh
Q 047768 170 LQGLSVGDNQLTGQLPASIGNLS-ALRVIDIRTNRLWGKIPITLSQLTSLAYLHVGDNHFSGTIPPSVYNISSLVEIYLY 248 (1009)
Q Consensus 170 L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 248 (1009)
++.|++.+|.++ .+|...+.++ +|+.|++++|++. .+|..+..+++|+.|++++|+++ .+|...+.+++|+.|+++
T Consensus 118 l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls 194 (394)
T COG4886 118 LTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLS 194 (394)
T ss_pred eeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheecc
Confidence 333444444444 3333333332 4444444444442 33333444444444444444444 333333344444444444
Q ss_pred CCccCCCCChhhccCCCcccceeccccccCCCCCCCcCcccccccccccccccccccccccccccccccccccccccCCC
Q 047768 249 GNRFTGSLPIEIGKNLPNLRNFVIYTNNFTGSLPDSFSNASNLEVLHLAENQFRGQVSINFNGLKDLSMLGLATNFLGNG 328 (1009)
Q Consensus 249 ~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~ 328 (1009)
+|+++ .+|..+. ....|++|.+++|.+. ..+..+.++.++..|.+.+|++... +..+..+.+++.|+++.|.+..+
T Consensus 195 ~N~i~-~l~~~~~-~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~~-~~~~~~l~~l~~L~~s~n~i~~i 270 (394)
T COG4886 195 GNKIS-DLPPEIE-LLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLEDL-PESIGNLSNLETLDLSNNQISSI 270 (394)
T ss_pred CCccc-cCchhhh-hhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeeec-cchhccccccceecccccccccc
Confidence 44444 4444321 1223444444444322 2334444555555555555554432 22233333344444444444332
Q ss_pred CCCCcchhhhcccccccceEEccCCCCCCcCch
Q 047768 329 AANDLDFVDLLTNCTKLQYLYLADNGFGGVLPH 361 (1009)
Q Consensus 329 ~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~ 361 (1009)
.. +..+.+++.|++++|.+....|.
T Consensus 271 ~~--------~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 271 SS--------LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred cc--------ccccCccCEEeccCccccccchh
Confidence 21 34455666666666666544443
No 463
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.29 E-value=9e-12 Score=142.41 Aligned_cols=143 Identities=19% Similarity=0.237 Sum_probs=100.5
Q ss_pred CCcccccCCceEEEEEEecCCeEEEEEEeecccccc----------------------------------------hHHH
Q 047768 706 SNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGG----------------------------------------SKSF 745 (1009)
Q Consensus 706 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----------------------------------------~~~~ 745 (1009)
.+.||.|++|.||+|+.+ +|+.||||+.+...... .-.|
T Consensus 122 ~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 367999999999999986 79999999985431100 0024
Q ss_pred HHHHHHHHhcC----CCCcceEEeeeeccccCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHH-
Q 047768 746 AAECEALRSIR----HRNLIKIVTICSSIDFKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVAS- 820 (1009)
Q Consensus 746 ~~E~~~l~~l~----h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~- 820 (1009)
.+|++.+.+++ |.+-+.+-.++... ....++||||++|++|.++....... . .+..++..++.
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~-----~---~~~~ia~~~~~~ 268 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYWDR----TSERVLTMEWIDGIPLSDIAALDEAG-----L---DRKALAENLARS 268 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEehhh----cCCceEEEEeECCcccccHHHHHhcC-----C---CHHHHHHHHHHH
Confidence 45666665552 33333333333221 23468999999999998886543211 2 23456666665
Q ss_pred HHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccCC
Q 047768 821 AVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSA 864 (1009)
Q Consensus 821 ~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~ 864 (1009)
.+..+|.. |++|+|++|.||+++.++.++++|||++..+..
T Consensus 269 ~l~ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 269 FLNQVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred HHHHHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 46788888 999999999999999999999999999987653
No 464
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.28 E-value=3.2e-12 Score=142.81 Aligned_cols=201 Identities=28% Similarity=0.326 Sum_probs=158.8
Q ss_pred cCccCCcccc--cCCceEEEEEE--ecCCeEEEEEEeecccc--cchHHHHHHHHHHHhc-CCCCcceEEeeeeccccCC
Q 047768 702 EFSSSNTIGR--GSFGFVYKGVL--HENGMLVAVKVINLEQK--GGSKSFAAECEALRSI-RHRNLIKIVTICSSIDFKG 774 (1009)
Q Consensus 702 ~~~~~~~lg~--G~~g~V~~~~~--~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 774 (1009)
.|.+.+.+|. |.+|.||.+.. ..++..+|+|.-+.... .....=.+|+...+++ .|++.++.... +.+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~-----~e~ 189 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPA-----WEG 189 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcc-----ccc
Confidence 5666788999 99999999998 78899999998543332 2334445677777777 49999996554 445
Q ss_pred CceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHH----HHHHHhhcCCCCceecCCCCCceeeCCC-C
Q 047768 775 VDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVAS----AVEYLHHHCQPPIVHGDLKPSNVLLDHD-M 849 (1009)
Q Consensus 775 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~----~l~~LH~~~~~~ivHrdlk~~Nill~~~-~ 849 (1009)
.+..++-+|++ +.+|.++.+..... ++....+.+..+..+ |+.++|+. .++|-|+||.||++..+ .
T Consensus 190 ~~~lfiqtE~~-~~sl~~~~~~~~~~-----~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~ 260 (524)
T KOG0601|consen 190 SGILFIQTELC-GESLQSYCHTPCNF-----LPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWT 260 (524)
T ss_pred CCcceeeeccc-cchhHHhhhccccc-----CCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccc
Confidence 67889999998 57898888775542 777788888888888 99999999 99999999999999999 8
Q ss_pred ceEEeccccccccCCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCCC
Q 047768 850 VAHVSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRPT 920 (1009)
Q Consensus 850 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~ 920 (1009)
.++++|||+...+......... .......|...|++||.. .+-++.+.||||+|.++.|..++-.+.
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~---~~~~r~~~~~~Y~~ke~~-~~l~~~~~di~sl~ev~l~~~l~~~~~ 327 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVF---KVSKRPEGDCIYAAKELL-NGLATFASDIFSLGEVILEAILGSHLP 327 (524)
T ss_pred eeecCCcceeEEccCCccccce---eeeecCCCCceEeChhhh-ccccchHhhhcchhhhhHhhHhhcccc
Confidence 9999999999988776533322 222333678899999984 457788999999999999999986654
No 465
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.27 E-value=3.6e-11 Score=135.29 Aligned_cols=172 Identities=19% Similarity=0.220 Sum_probs=132.0
Q ss_pred EEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEeccCCCCHHHHHhccC
Q 047768 719 KGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYEYMQNGSLEEWLHQRD 798 (1009)
Q Consensus 719 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 798 (1009)
.|..+.++.+|.|+..+...........+.++.|+.+|||||++++.... ..+..|+|+|.+. .|..++++
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e-----~~~~~ylvTErV~--Pl~~~lk~-- 100 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTE-----EEGTLYLVTERVR--PLETVLKE-- 100 (690)
T ss_pred ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhc-----ccCceEEEeeccc--cHHHHHHH--
Confidence 46667789999999887655544566788899999999999999998743 3468899999985 57777776
Q ss_pred CCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccCCCCCCCccccCCccc
Q 047768 799 DQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSASPLGNVVETPSSSI 878 (1009)
Q Consensus 799 ~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~ 878 (1009)
+........++||+.||.|||+.| +++|+++....|+|++.|..||++|.++........ ...
T Consensus 101 -------l~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--------~~~ 163 (690)
T KOG1243|consen 101 -------LGKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--------PAK 163 (690)
T ss_pred -------hHHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--------ccc
Confidence 335667788999999999999776 899999999999999999999999998875543211 011
Q ss_pred cccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCC
Q 047768 879 GVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRR 918 (1009)
Q Consensus 879 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~ 918 (1009)
...---.|..|+.+.... ...|.|-||+++||++.|..
T Consensus 164 ~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~~ 201 (690)
T KOG1243|consen 164 SLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNGSL 201 (690)
T ss_pred cchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCccc
Confidence 111223466777554433 35699999999999999933
No 466
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.19 E-value=5.1e-12 Score=134.07 Aligned_cols=211 Identities=22% Similarity=0.245 Sum_probs=138.6
Q ss_pred cCccccccccccccccCCCCC--CCCcCCCcCcEEecccccccCCCchHHhhhccCCcCeEeecCccCCCCCCcc-cCCc
Q 047768 115 GNLFRLETLVLANNSFSGRIP--TNLSHCSKLITFSAHRNNLVGEIPEELISRRLFNLQGLSVGDNQLTGQLPAS-IGNL 191 (1009)
Q Consensus 115 ~~l~~L~~L~Ls~N~l~~~~p--~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~n~l~~~~p~~-~~~l 191 (1009)
+++.+|+...|.+.... ..+ .....|++++.||||+|-+..-.|..-+...|++|+.|+|+.|++.-..... -..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 56778888888888775 333 3667788888888888888766666556678888888888888887433322 2367
Q ss_pred cccceeecccCcccCC-CCcccccccccccccccCccCCCCCCCcccCCChHHHHHhhCCccCCCCCh-hhccCCCcccc
Q 047768 192 SALRVIDIRTNRLWGK-IPITLSQLTSLAYLHVGDNHFSGTIPPSVYNISSLVEIYLYGNRFTGSLPI-EIGKNLPNLRN 269 (1009)
Q Consensus 192 ~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~-~~~~~l~~L~~ 269 (1009)
++|+.|.|+.|.++-. +-..+..+++|+.|+|..|..-+.-......+..|++|||++|++. ..+. ..-..++.|+.
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li-~~~~~~~~~~l~~L~~ 275 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLI-DFDQGYKVGTLPGLNQ 275 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccc-ccccccccccccchhh
Confidence 7888888888888622 2223455688888888888533344444556777888888888876 4442 12235777888
Q ss_pred eeccccccCCCC-CCC-----cCcccccccccccccccccccc-cccccccccccccccccccCC
Q 047768 270 FVIYTNNFTGSL-PDS-----FSNASNLEVLHLAENQFRGQVS-INFNGLKDLSMLGLATNFLGN 327 (1009)
Q Consensus 270 L~L~~N~l~~~~-p~~-----~~~l~~L~~L~Ls~N~l~~~~~-~~f~~l~~L~~L~L~~N~l~~ 327 (1009)
|.++.+.+..+- |+. -..+++|++|+++.|+|..... ..+..+++|+.|....|.++.
T Consensus 276 Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 276 LNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred hhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcccccccc
Confidence 888888776432 222 3556778888888887764322 223344555555555555544
No 467
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.18 E-value=7.6e-11 Score=135.93 Aligned_cols=149 Identities=18% Similarity=0.217 Sum_probs=95.0
Q ss_pred ccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccccc----------------------------------chH---
Q 047768 701 NEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG----------------------------------GSK--- 743 (1009)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----------------------------------~~~--- 743 (1009)
.+|+. +.+|+|++|.||+|+.+.+|+.||||+.+..... -.+
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 35665 7899999999999999877999999999643100 001
Q ss_pred ---HHHHHHHHHHhcC----CCCcceEEeeeeccccCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHH
Q 047768 744 ---SFAAECEALRSIR----HRNLIKIVTICSSIDFKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVI 816 (1009)
Q Consensus 744 ---~~~~E~~~l~~l~----h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~ 816 (1009)
++.+|+..+.+++ +...+.+-.++.+. ....++||||++|+.+.++-.-...+.....+.......++.
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~----st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~ 274 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDY----CSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFT 274 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeeccc----CCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 2444555555542 43333333332211 245689999999999987532111110001122222222333
Q ss_pred HHHHHHHHHhhcCCCCceecCCCCCceeeCCCC----ceEEeccccccccCC
Q 047768 817 DVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDM----VAHVSDFGLAKFLSA 864 (1009)
Q Consensus 817 ~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~----~~kl~DfGla~~~~~ 864 (1009)
| ++.. |++|+|++|.||+++.++ .++++|||++..++.
T Consensus 275 Q-------if~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 275 Q-------VFRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred H-------HHhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 3 3345 999999999999999988 999999999987754
No 468
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.14 E-value=2.5e-12 Score=132.97 Aligned_cols=248 Identities=19% Similarity=0.260 Sum_probs=139.4
Q ss_pred CcCeEeecCccCCC----CCCcccCCccccceeecccC---cccCCCC-------cccccccccccccccCccCCCCCCC
Q 047768 169 NLQGLSVGDNQLTG----QLPASIGNLSALRVIDIRTN---RLWGKIP-------ITLSQLTSLAYLHVGDNHFSGTIPP 234 (1009)
Q Consensus 169 ~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~N---~l~~~~p-------~~~~~l~~L~~L~L~~N~l~~~~p~ 234 (1009)
.++.|+|++|.+.. .+...+.+.++|+..++|+= ++...+| .++...++|++||||+|.|.-.-+.
T Consensus 31 s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~~ 110 (382)
T KOG1909|consen 31 SLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGIR 110 (382)
T ss_pred ceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccchH
Confidence 44444444444431 12234455556666666652 2222333 3445567888899999888744443
Q ss_pred c----ccCCChHHHHHhhCCccCCCCCh-hhccCCCcccceeccccccCCCCCCCcCcccccccccccccccccccc---
Q 047768 235 S----VYNISSLVEIYLYGNRFTGSLPI-EIGKNLPNLRNFVIYTNNFTGSLPDSFSNASNLEVLHLAENQFRGQVS--- 306 (1009)
Q Consensus 235 ~----~~~l~~L~~L~L~~N~l~~~ip~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~--- 306 (1009)
. +..+.+|++|+|.+|.+. .... .+++ .|..|. .|+. ...-++|++++.++|++..-..
T Consensus 111 ~l~~ll~s~~~L~eL~L~N~Glg-~~ag~~l~~---al~~l~--~~kk-------~~~~~~Lrv~i~~rNrlen~ga~~~ 177 (382)
T KOG1909|consen 111 GLEELLSSCTDLEELYLNNCGLG-PEAGGRLGR---ALFELA--VNKK-------AASKPKLRVFICGRNRLENGGATAL 177 (382)
T ss_pred HHHHHHHhccCHHHHhhhcCCCC-hhHHHHHHH---HHHHHH--HHhc-------cCCCcceEEEEeeccccccccHHHH
Confidence 3 345778999999999886 2221 1111 233332 2222 2234678888888888875433
Q ss_pred -cccccccccccccccccccCCCCCCCcchhhhcccccccceEEccCCCCCCcCchhhhhhcccceEEEcCCCccccCCC
Q 047768 307 -INFNGLKDLSMLGLATNFLGNGAANDLDFVDLLTNCTKLQYLYLADNGFGGVLPHSIANLSTALIDFNLGKNQIYGTIP 385 (1009)
Q Consensus 307 -~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p 385 (1009)
..|...+.|+.+.++.|.|..-+. ......|..+++|+.|||.+|-|+......+ .
T Consensus 178 A~~~~~~~~leevr~~qN~I~~eG~--~al~eal~~~~~LevLdl~DNtft~egs~~L---------------------a 234 (382)
T KOG1909|consen 178 AEAFQSHPTLEEVRLSQNGIRPEGV--TALAEALEHCPHLEVLDLRDNTFTLEGSVAL---------------------A 234 (382)
T ss_pred HHHHHhccccceEEEecccccCchh--HHHHHHHHhCCcceeeecccchhhhHHHHHH---------------------H
Confidence 345666777888888887765444 2334567788888888888888773322211 2
Q ss_pred ccccCcCccCEEEccCCCCCCCCCCCc-----CCcccccceecccccccC----CCCcccccccccccccccCccc
Q 047768 386 PGIANLVNLNSLRMEANRLTGTIPHVI-----GELKNLQLLHLHANFLQG----TIPSSLGNLTLLTYLSFGANNL 452 (1009)
Q Consensus 386 ~~~~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l 452 (1009)
..++.+++|+.|+++++.+...-..+| ...++|+.|.|.+|.++. .+...+...+.|..|+|++|++
T Consensus 235 kaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 235 KALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 233444556666666666553333222 134566666666666652 1122233455566666666666
No 469
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.14 E-value=6.5e-10 Score=111.07 Aligned_cols=137 Identities=19% Similarity=0.174 Sum_probs=99.5
Q ss_pred CcccccCCceEEEEEEec------CCeEEEEEEeeccc------------c----------cchHHH----HHHHHHHHh
Q 047768 707 NTIGRGSFGFVYKGVLHE------NGMLVAVKVINLEQ------------K----------GGSKSF----AAECEALRS 754 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~------~~~~vavK~~~~~~------------~----------~~~~~~----~~E~~~l~~ 754 (1009)
..||.|.-+.||.|.... .+..+|||+.+... . ...+.+ .+|.+.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999997643 35799999985211 0 001223 389999999
Q ss_pred cC--CCCcceEEeeeeccccCCCceEEEEEeccCCCCHHH-HHhccCCCCCccCCCHHHHHHHHHHHHHHHHHH-hhcCC
Q 047768 755 IR--HRNLIKIVTICSSIDFKGVDFKALVYEYMQNGSLEE-WLHQRDDQLGICNLSLIQRLNIVIDVASAVEYL-HHHCQ 830 (1009)
Q Consensus 755 l~--h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~L-H~~~~ 830 (1009)
+. .-++.+.+++ ...++||||+.+..+.. .++.. .++..+...+..+++.++.++ |..
T Consensus 83 l~~~Gv~vP~pi~~---------~~~~lvME~Ig~~~~~~~~Lkd~-------~~~~~~~~~i~~~i~~~l~~l~H~~-- 144 (197)
T cd05146 83 MQKAGIPCPEVVVL---------KKHVLVMSFIGDDQVPAPKLKDA-------KLNDEEMKNAYYQVLSMMKQLYKEC-- 144 (197)
T ss_pred HHHcCCCCCeEEEe---------cCCEEEEEEcCCCCccchhhhcc-------ccCHHHHHHHHHHHHHHHHHHHHhC--
Confidence 84 3566777765 34589999997654421 22221 245556677889999999999 777
Q ss_pred CCceecCCCCCceeeCCCCceEEeccccccccC
Q 047768 831 PPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLS 863 (1009)
Q Consensus 831 ~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~ 863 (1009)
++||||+++.||+++ ++.+.++|||.|....
T Consensus 145 -glVHGDLs~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 145 -NLVHADLSEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred -CeecCCCCHHHEEEE-CCcEEEEECCCceeCC
Confidence 999999999999997 4689999999887554
No 470
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.13 E-value=6.4e-12 Score=133.28 Aligned_cols=189 Identities=21% Similarity=0.225 Sum_probs=95.9
Q ss_pred ccCCcCeEeecCccCCCCCC--cccCCccccceeecccCcccC--CCCcccccccccccccccCccCCCCCCCc-ccCCC
Q 047768 166 RLFNLQGLSVGDNQLTGQLP--ASIGNLSALRVIDIRTNRLWG--KIPITLSQLTSLAYLHVGDNHFSGTIPPS-VYNIS 240 (1009)
Q Consensus 166 ~l~~L~~L~L~~n~l~~~~p--~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~ 240 (1009)
.+.+|++..|.+.... ..+ .....|++++.||||.|-+.. .+-.-...|++|+.|+|+.|++.-..... -..++
T Consensus 119 n~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 4555666666666555 222 245566777777777776642 22233455677777777777665222111 12345
Q ss_pred hHHHHHhhCCccCCCCChhhccCCCcccceeccccccCCCCCCCcCcccccccccccccccccccc-ccccccccccccc
Q 047768 241 SLVEIYLYGNRFTGSLPIEIGKNLPNLRNFVIYTNNFTGSLPDSFSNASNLEVLHLAENQFRGQVS-INFNGLKDLSMLG 319 (1009)
Q Consensus 241 ~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~f~~l~~L~~L~ 319 (1009)
+|+.|.|++|.|+-.--..+....|+|+.|+|+.|....+-......+..|+.|||++|++-.... .....++.|..|+
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 566666666666521111223345666666666664333444445556667777777766654321 2233444555555
Q ss_pred ccccccCCCCCCCcchhhhcccccccceEEccCCCC
Q 047768 320 LATNFLGNGAANDLDFVDLLTNCTKLQYLYLADNGF 355 (1009)
Q Consensus 320 L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l 355 (1009)
++.+.|..+..-+....+-....++|++|+++.|++
T Consensus 278 ls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I 313 (505)
T KOG3207|consen 278 LSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNI 313 (505)
T ss_pred ccccCcchhcCCCccchhhhcccccceeeecccCcc
Confidence 555555444333322222233344444444444444
No 471
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.11 E-value=2.6e-10 Score=114.07 Aligned_cols=130 Identities=18% Similarity=0.167 Sum_probs=95.4
Q ss_pred CCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcc-eEEeeeeccccCCCceEEEEEec
Q 047768 706 SNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLI-KIVTICSSIDFKGVDFKALVYEY 784 (1009)
Q Consensus 706 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~~~~~~lv~e~ 784 (1009)
.+.++.|.++.||+++.. +..|++|+...... ....+.+|+++++.+.+.+++ +++.+.. ...++||||
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~-------~~~~lv~e~ 72 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP-------ETGVLITEF 72 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC-------CCCeEEEEe
Confidence 356899999999999874 78899998753321 234568899999998655543 4444321 224799999
Q ss_pred cCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcC--CCCceecCCCCCceeeCCCCceEEecccccc
Q 047768 785 MQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHC--QPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 785 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~--~~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
+++.++.+. . . ....++.+++++++.||+.. ..+++|+|++|.||+++ ++.++++|||.+.
T Consensus 73 i~G~~l~~~----~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 73 IEGSELLTE----D-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred cCCCccccc----c-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 999877543 0 0 11345678999999999982 12359999999999999 6789999999886
No 472
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.07 E-value=2.2e-11 Score=139.76 Aligned_cols=129 Identities=22% Similarity=0.291 Sum_probs=67.0
Q ss_pred ccCCcCeEeecCccCCCCCCcccCCccccceeecccCcccCCCCcccccccccccccccCccCCCCCCCcccCCChHHHH
Q 047768 166 RLFNLQGLSVGDNQLTGQLPASIGNLSALRVIDIRTNRLWGKIPITLSQLTSLAYLHVGDNHFSGTIPPSVYNISSLVEI 245 (1009)
Q Consensus 166 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 245 (1009)
.+..++.+.+..|.+.. +-..+..+++|+.|++.+|+|... ...+..+++|++|+|++|+|+... .+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheecccccccccc--chhhccchhhh
Confidence 35566666677776663 233356666677777777777432 222556666666777766666332 24445556666
Q ss_pred HhhCCccCCCCChhhccCCCcccceeccccccCCCCC-CCcCcccccccccccccccc
Q 047768 246 YLYGNRFTGSLPIEIGKNLPNLRNFVIYTNNFTGSLP-DSFSNASNLEVLHLAENQFR 302 (1009)
Q Consensus 246 ~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~ 302 (1009)
++++|.|+ .++.. ..+++|+.+++++|.+..+.+ . ...+.+++.+++..|.+.
T Consensus 146 ~l~~N~i~-~~~~~--~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~ 199 (414)
T KOG0531|consen 146 NLSGNLIS-DISGL--ESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIR 199 (414)
T ss_pred eeccCcch-hccCC--ccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchh
Confidence 66666665 33321 124444444444444443322 1 233344444444444433
No 473
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.06 E-value=5e-11 Score=136.79 Aligned_cols=219 Identities=26% Similarity=0.323 Sum_probs=136.0
Q ss_pred cCCCCCCeeeecCCcCCccCCccccCccccccccccccccCCCCCCCCcCCCcCcEEecccccccCCCchHHhhhccCCc
Q 047768 91 GNLSFLRYINIADNDFHGEIPDRIGNLFRLETLVLANNSFSGRIPTNLSHCSKLITFSAHRNNLVGEIPEELISRRLFNL 170 (1009)
Q Consensus 91 ~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L 170 (1009)
..+..+..+++..|.+. .+-..+..+++|+.|+|.+|+|. .+...+..+++|++|++++|.|+...+-. .+..|
T Consensus 69 ~~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~~l~----~l~~L 142 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLEGLS----TLTLL 142 (414)
T ss_pred HHhHhHHhhccchhhhh-hhhcccccccceeeeeccccchh-hcccchhhhhcchheeccccccccccchh----hccch
Confidence 35666777777788777 44455777888888888888887 34444777788888888888777544443 34557
Q ss_pred CeEeecCccCCCCCCcccCCccccceeecccCcccCCCC-cccccccccccccccCccCCCCCCCcccCCChHHHHHhhC
Q 047768 171 QGLSVGDNQLTGQLPASIGNLSALRVIDIRTNRLWGKIP-ITLSQLTSLAYLHVGDNHFSGTIPPSVYNISSLVEIYLYG 249 (1009)
Q Consensus 171 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 249 (1009)
+.|++++|.|+. + ..+..+++|+.+++++|++....+ . ...+.+|+.+++.+|.+. ....+..+..+..+++..
T Consensus 143 ~~L~l~~N~i~~-~-~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~--~i~~~~~~~~l~~~~l~~ 217 (414)
T KOG0531|consen 143 KELNLSGNLISD-I-SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIR--EIEGLDLLKKLVLLSLLD 217 (414)
T ss_pred hhheeccCcchh-c-cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchh--cccchHHHHHHHHhhccc
Confidence 777888887773 2 335557777888888887764444 2 466777777777777775 233444455566667777
Q ss_pred CccCCCCChhhccCCCc--ccceeccccccCCCCCCCcCcccccccccccccccccccccccccccccccccccccccC
Q 047768 250 NRFTGSLPIEIGKNLPN--LRNFVIYTNNFTGSLPDSFSNASNLEVLHLAENQFRGQVSINFNGLKDLSMLGLATNFLG 326 (1009)
Q Consensus 250 N~l~~~ip~~~~~~l~~--L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~L~~N~l~ 326 (1009)
|+++ .+-.-. .+.. |+.+++++|.+... +..+..+.++..|++.+|++..... +.....+..+.+..|.+.
T Consensus 218 n~i~-~~~~l~--~~~~~~L~~l~l~~n~i~~~-~~~~~~~~~l~~l~~~~n~~~~~~~--~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 218 NKIS-KLEGLN--ELVMLHLRELYLSGNRISRS-PEGLENLKNLPVLDLSSNRISNLEG--LERLPKLSELWLNDNKLA 290 (414)
T ss_pred ccce-eccCcc--cchhHHHHHHhcccCccccc-cccccccccccccchhhcccccccc--ccccchHHHhccCcchhc
Confidence 7776 222111 1222 67777777777632 2455566677777777776654332 233344444444444443
No 474
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.05 E-value=3.7e-11 Score=120.96 Aligned_cols=93 Identities=25% Similarity=0.322 Sum_probs=61.7
Q ss_pred CCCCCcccCCChHHHHHhhCCccCCCCChhhccCCCcccceeccccccCCCCCCCcCccccccccccccccccccccccc
Q 047768 230 GTIPPSVYNISSLVEIYLYGNRFTGSLPIEIGKNLPNLRNFVIYTNNFTGSLPDSFSNASNLEVLHLAENQFRGQVSINF 309 (1009)
Q Consensus 230 ~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~f 309 (1009)
|..-..+.....|++||||+|.|+ .+...+ +-+|+++.|++|+|.|+.+ +.++.+++|+.||||+|.++.... .-
T Consensus 274 G~~~~~~dTWq~LtelDLS~N~I~-~iDESv-KL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~~~G-wh 348 (490)
T KOG1259|consen 274 GSALVSADTWQELTELDLSGNLIT-QIDESV-KLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAECVG-WH 348 (490)
T ss_pred CceEEecchHhhhhhccccccchh-hhhhhh-hhccceeEEeccccceeee--hhhhhcccceEeecccchhHhhhh-hH
Confidence 333334444567889999999888 777665 3478888888888888744 237788888888888888775432 22
Q ss_pred ccccccccccccccccCC
Q 047768 310 NGLKDLSMLGLATNFLGN 327 (1009)
Q Consensus 310 ~~l~~L~~L~L~~N~l~~ 327 (1009)
..+.+++.|.|+.|.|..
T Consensus 349 ~KLGNIKtL~La~N~iE~ 366 (490)
T KOG1259|consen 349 LKLGNIKTLKLAQNKIET 366 (490)
T ss_pred hhhcCEeeeehhhhhHhh
Confidence 234455555555555443
No 475
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.03 E-value=8.6e-11 Score=118.35 Aligned_cols=133 Identities=25% Similarity=0.231 Sum_probs=97.7
Q ss_pred ccccccccccCcccccccCCCCCCCCCccccccCCCCccCCCchhhhhhccceeeEecCCCccCCCCCCCccCCCCCCee
Q 047768 439 LTLLTYLSFGANNLQGNIPFSLGNCKNLMFFFAPRNKLTGALPQQILEITTLSLSLDLSDNLLNGSLPLGVGNLKSLVRL 518 (1009)
Q Consensus 439 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L 518 (1009)
...|++||||+|.|+ .+.++..-.+.++. |++|+|.+.. + ..+..|.+|+.|
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~-------------------------L~lS~N~i~~-v-~nLa~L~~L~~L 334 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRR-------------------------LILSQNRIRT-V-QNLAELPQLQLL 334 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeE-------------------------Eeccccceee-e-hhhhhcccceEe
Confidence 355666666666666 45555554444444 5555555542 2 236678899999
Q ss_pred eccccccCCCccccccCCCCccEEEecCcccccccccccccccccceEcCCCccccccc-ccccccccccCceecccccC
Q 047768 519 GIARNQFSGQIPVTLGACTSLEYVELQGNSFSGTIPQSLSSLTSIKELDLSQNNFSGQI-PKYLENLSFLQYLNLSYNHF 597 (1009)
Q Consensus 519 ~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~ls~N~l 597 (1009)
|||+|.++ .+..+-.++.+.+.|.|++|.|... ..++.|-+|..||+++|+|.... -..+++|+-|+++.|.+|++
T Consensus 335 DLS~N~Ls-~~~Gwh~KLGNIKtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl 411 (490)
T KOG1259|consen 335 DLSGNLLA-ECVGWHLKLGNIKTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPL 411 (490)
T ss_pred ecccchhH-hhhhhHhhhcCEeeeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCc
Confidence 99999998 5666777788999999999998732 46788889999999999998422 24689999999999999999
Q ss_pred cccCC
Q 047768 598 EGEVP 602 (1009)
Q Consensus 598 ~g~~p 602 (1009)
.+.+-
T Consensus 412 ~~~vd 416 (490)
T KOG1259|consen 412 AGSVD 416 (490)
T ss_pred cccch
Confidence 87554
No 476
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.01 E-value=2.4e-10 Score=111.85 Aligned_cols=129 Identities=29% Similarity=0.384 Sum_probs=46.7
Q ss_pred ccCCCCCCeeeecCCcCCccCCcccc-CccccccccccccccCCCCCCCCcCCCcCcEEecccccccCCCchHHhhhccC
Q 047768 90 VGNLSFLRYINIADNDFHGEIPDRIG-NLFRLETLVLANNSFSGRIPTNLSHCSKLITFSAHRNNLVGEIPEELISRRLF 168 (1009)
Q Consensus 90 ~~~l~~L~~L~L~~n~~~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~ 168 (1009)
+.+...+++|+|++|.|+ .|. .++ .+.+|+.||||+|.|+. + +.+..+++|++|++++|.++. +++.+. ..++
T Consensus 15 ~~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~~-l-~~l~~L~~L~~L~L~~N~I~~-i~~~l~-~~lp 88 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQITK-L-EGLPGLPRLKTLDLSNNRISS-ISEGLD-KNLP 88 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S--CHHHH-HH-T
T ss_pred cccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCcc-c-cCccChhhhhhcccCCCCCCc-cccchH-HhCC
Confidence 455667888999999988 453 466 57889999999999884 3 357788888888888888874 443332 3577
Q ss_pred CcCeEeecCccCCCCCC-cccCCccccceeecccCcccCCCC---ccccccccccccccc
Q 047768 169 NLQGLSVGDNQLTGQLP-ASIGNLSALRVIDIRTNRLWGKIP---ITLSQLTSLAYLHVG 224 (1009)
Q Consensus 169 ~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~L~ 224 (1009)
+|++|+|++|+|...-- ..++.+++|++|+|.+|.+....- ..+..+++|+.||-.
T Consensus 89 ~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 89 NLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp T--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETTE
T ss_pred cCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCCE
Confidence 88888888888874322 456777888888888888753311 135567777777643
No 477
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.96 E-value=1.5e-11 Score=127.26 Aligned_cols=142 Identities=21% Similarity=0.270 Sum_probs=68.6
Q ss_pred ChHHHHHhhCCccCCCCCh----hhccCCCcccceeccccccCC----CCCCCcCccccccccccccccccccccccccc
Q 047768 240 SSLVEIYLYGNRFTGSLPI----EIGKNLPNLRNFVIYTNNFTG----SLPDSFSNASNLEVLHLAENQFRGQVSINFNG 311 (1009)
Q Consensus 240 ~~L~~L~L~~N~l~~~ip~----~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~f~~ 311 (1009)
+.|+.+...+|++. .-+. ..++..+.|+.+.++.|.|.. .+...|..+++|++|||.+|-++.
T Consensus 157 ~~Lrv~i~~rNrle-n~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~-------- 227 (382)
T KOG1909|consen 157 PKLRVFICGRNRLE-NGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTL-------- 227 (382)
T ss_pred cceEEEEeeccccc-cccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhh--------
Confidence 34555555555554 2222 233344555555555555531 112234455555555555555443
Q ss_pred ccccccccccccccCCCCCCCcchhhhcccccccceEEccCCCCCCcCchhhhhhcccceEEEcCCCccccCCCccccCc
Q 047768 312 LKDLSMLGLATNFLGNGAANDLDFVDLLTNCTKLQYLYLADNGFGGVLPHSIANLSTALIDFNLGKNQIYGTIPPGIANL 391 (1009)
Q Consensus 312 l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l 391 (1009)
.+. ......+..+++|+.|+++++.+...-...+.+-.. ...
T Consensus 228 ----------------egs--~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~--------------------~~~ 269 (382)
T KOG1909|consen 228 ----------------EGS--VALAKALSSWPHLRELNLGDCLLENEGAIAFVDALK--------------------ESA 269 (382)
T ss_pred ----------------HHH--HHHHHHhcccchheeecccccccccccHHHHHHHHh--------------------ccC
Confidence 221 122345556667777777777766544443332210 113
Q ss_pred CccCEEEccCCCCCCC----CCCCcCCcccccceecccccc
Q 047768 392 VNLNSLRMEANRLTGT----IPHVIGELKNLQLLHLHANFL 428 (1009)
Q Consensus 392 ~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l 428 (1009)
++|++|.|.+|.|+.. +...+...+.|..|+|++|.+
T Consensus 270 p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 270 PSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred CCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 4555555555555421 112233456666666666666
No 478
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.94 E-value=8.3e-10 Score=123.77 Aligned_cols=248 Identities=18% Similarity=0.123 Sum_probs=168.6
Q ss_pred HHhccCccCCcccccCCceEEEEEEe-cCCeEEEEEEeecccccchH--HHHHHHHHHHhc-CCCCcceEEeeeeccccC
Q 047768 698 KATNEFSSSNTIGRGSFGFVYKGVLH-ENGMLVAVKVINLEQKGGSK--SFAAECEALRSI-RHRNLIKIVTICSSIDFK 773 (1009)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 773 (1009)
....+|..+..||.|.|+.|+..... .++..+++|........... .-..|+.+...+ .|.+++++...+...
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~--- 338 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQL--- 338 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccc---
Confidence 34567888899999999999998866 67889999987533322221 123455555555 577777766543322
Q ss_pred CCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCC-CceE
Q 047768 774 GVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAH 852 (1009)
Q Consensus 774 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~-~~~k 852 (1009)
...++-.|||+++++.....-.. .+++..++.+..+++.++.++|+. .++|+|+||+||++..+ +..+
T Consensus 339 --r~~~ip~e~~~~~s~~l~~~~~~------~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~ 407 (524)
T KOG0601|consen 339 --RQGYIPLEFCEGGSSSLRSVTSQ------MLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSK 407 (524)
T ss_pred --ccccCchhhhcCcchhhhhHHHH------hcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhh
Confidence 45568889999998877663222 377888899999999999999998 99999999999999886 8899
Q ss_pred EeccccccccCCCCCCCccccCCcccccccccccc--CccccCCCCCCCcccchHHHHHHHHHHhCCCCCcccccCCccH
Q 047768 853 VSDFGLAKFLSASPLGNVVETPSSSIGVKGTIGYV--APEYGLGGEASMRGGVYSYGILLLEIFTRRRPTESMFNEGLTL 930 (1009)
Q Consensus 853 l~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p~~~~~~~~~~~ 930 (1009)
+.|||.+..+.-.. . .....-+++ +|+......+..++|+||||.-+.|.++|..--+...
T Consensus 408 ~~~~~~~t~~~~~~----------~-~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~------ 470 (524)
T KOG0601|consen 408 LGDFGCWTRLAFSS----------G-VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV------ 470 (524)
T ss_pred ccccccccccceec----------c-cccccccccccchhhccccccccccccccccccccccccCcccCcccc------
Confidence 99999987432110 0 011223334 6666777888999999999999999999865322110
Q ss_pred HHHHHHhccchhhhccCCCCCChhhhhhhccccccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 047768 931 HEFAKRALPEKVMEIVDPSLLPLEEERTNSRRVRNEECLVAVIKTGVACSIESPFDRMEMTDVVVKLC 998 (1009)
Q Consensus 931 ~~~~~~~~~~~~~~~~d~~l~~~~~~r~~~~~~~~~~~~~~l~~l~~~cl~~dp~~Rpt~~evl~~L~ 998 (1009)
.| ..+....+...+ .....+..++..+...++..||.+.+......
T Consensus 471 -~~---------~~i~~~~~p~~~------------~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~ 516 (524)
T KOG0601|consen 471 -QS---------LTIRSGDTPNLP------------GLKLQLQVLLKVMINPDRKRRPSAVELSLHSE 516 (524)
T ss_pred -cc---------eeeecccccCCC------------chHHhhhhhhhhhcCCccccchhhhhhcccch
Confidence 00 011111010000 11134556777788899999999888765544
No 479
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.89 E-value=6.6e-10 Score=108.78 Aligned_cols=111 Identities=23% Similarity=0.296 Sum_probs=36.6
Q ss_pred cCCChHHHHHhhCCccCCCCChhhccCCCcccceeccccccCCCCCCCcCcccccccccccccccccccccccccccccc
Q 047768 237 YNISSLVEIYLYGNRFTGSLPIEIGKNLPNLRNFVIYTNNFTGSLPDSFSNASNLEVLHLAENQFRGQVSINFNGLKDLS 316 (1009)
Q Consensus 237 ~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~ 316 (1009)
.+..++++|+|++|+|+ .|. .....+.+|+.|+|++|.|+.+ +.+..+++|++|++++|+|+.+.......+++|+
T Consensus 16 ~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~ 91 (175)
T PF14580_consen 16 NNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQ 91 (175)
T ss_dssp ----------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-CHHHHHH-TT--
T ss_pred ccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCccccchHHhCCcCC
Confidence 34445666666666666 443 3333466777777777777754 2466677777788888877765443234567777
Q ss_pred cccccccccCCCCCCCcchhhhcccccccceEEccCCCCC
Q 047768 317 MLGLATNFLGNGAANDLDFVDLLTNCTKLQYLYLADNGFG 356 (1009)
Q Consensus 317 ~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~ 356 (1009)
.|+|++|.|.+... ...+..+++|+.|+|.+|.++
T Consensus 92 ~L~L~~N~I~~l~~-----l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 92 ELYLSNNKISDLNE-----LEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp EEE-TTS---SCCC-----CGGGGG-TT--EEE-TT-GGG
T ss_pred EEECcCCcCCChHH-----hHHHHcCCCcceeeccCCccc
Confidence 77777777766543 245667788888888888776
No 480
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.88 E-value=9e-08 Score=101.83 Aligned_cols=275 Identities=14% Similarity=0.102 Sum_probs=164.7
Q ss_pred ccCCcccccCCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhc-CCCCcceEEeeeecc--ccCCCceEEE
Q 047768 704 SSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSI-RHRNLIKIVTICSSI--DFKGVDFKAL 780 (1009)
Q Consensus 704 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~--~~~~~~~~~l 780 (1009)
...+.||+|+.+.+|-.-.. + ..+-|+.......... +.+..|.+. .||-+-.-+.|=... .-......-+
T Consensus 14 ~~gr~LgqGgea~ly~l~e~--~-d~VAKIYh~Pppa~~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGf 87 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV--R-DQVAKIYHAPPPAAQA---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGF 87 (637)
T ss_pred CCCccccCCccceeeecchh--h-chhheeecCCCchHHH---HHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEE
Confidence 34678999999999965332 2 2345777544332222 223344444 566543322221100 0111222445
Q ss_pred EEeccCCC-CHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccc
Q 047768 781 VYEYMQNG-SLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 859 (1009)
Q Consensus 781 v~e~~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla 859 (1009)
.|..+.+. -...+.............+|....+.++.+|.+.+-||+. |.+-+|+.++|+|+++++.|.+.|-..-
T Consensus 88 lmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsf 164 (637)
T COG4248 88 LMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSF 164 (637)
T ss_pred ecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccce
Confidence 66665543 3444444333333456789999999999999999999999 9999999999999999999999875432
Q ss_pred cccCCCCCCCccccCCccccccccccccCccccC-----CCCCCCcccchHHHHHHHHHHhC-CCCCcccccCCccHHHH
Q 047768 860 KFLSASPLGNVVETPSSSIGVKGTIGYVAPEYGL-----GGEASMRGGVYSYGILLLEIFTR-RRPTESMFNEGLTLHEF 933 (1009)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvvl~elltg-~~p~~~~~~~~~~~~~~ 933 (1009)
.....+ ......+|...|.+||.-. +...+...|-|.+||++++++.| +.||.........
T Consensus 165 qi~~ng---------~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~a---- 231 (637)
T COG4248 165 QINANG---------TLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDA---- 231 (637)
T ss_pred eeccCC---------ceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCC----
Confidence 222111 2223456889999999633 34457789999999999999995 9999754221100
Q ss_pred HHHhccchhh-hccCCCCCChhh----hhhhccccccHHHHHHHHHHHhhccCCC--CCCCCCHHHHHHHHHHHHHhhh
Q 047768 934 AKRALPEKVM-EIVDPSLLPLEE----ERTNSRRVRNEECLVAVIKTGVACSIES--PFDRMEMTDVVVKLCHARQNFL 1005 (1009)
Q Consensus 934 ~~~~~~~~~~-~~~d~~l~~~~~----~r~~~~~~~~~~~~~~l~~l~~~cl~~d--p~~Rpt~~evl~~L~~i~~~~~ 1005 (1009)
+.... ++....+....+ .++....+.-.--+..+..+..+|.... +.-|||++..+..|.+..++..
T Consensus 232 -----p~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~ 305 (637)
T COG4248 232 -----PNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLK 305 (637)
T ss_pred -----CCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhh
Confidence 00000 111111111111 1111122222223345666677887653 6789999999999988877654
No 481
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.88 E-value=2.3e-08 Score=95.83 Aligned_cols=129 Identities=26% Similarity=0.360 Sum_probs=94.9
Q ss_pred CcccccCCceEEEEEEecCCeEEEEEEeeccccc--------chHHHHHHHHHHHhcCCC--CcceEEeeeeccccCCCc
Q 047768 707 NTIGRGSFGFVYKGVLHENGMLVAVKVINLEQKG--------GSKSFAAECEALRSIRHR--NLIKIVTICSSIDFKGVD 776 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~~~~~~~ 776 (1009)
..+++|+-+.+|.+.+. |..+++|.=..+.-. ......+|++++.+++-. ++..++++ +++
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dv-------D~~ 72 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDV-------DPD 72 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEE-------cCC
Confidence 35789999999999885 555667743211111 123567899999988533 33344443 225
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecc
Q 047768 777 FKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 856 (1009)
Q Consensus 777 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df 856 (1009)
...++|||+++..|.+++.... ..++..+=.-+.-||.. +|||+|+.++||.+..+. +.++||
T Consensus 73 ~~~I~me~I~G~~lkd~l~~~~-------------~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDf 135 (204)
T COG3642 73 NGLIVMEYIEGELLKDALEEAR-------------PDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDF 135 (204)
T ss_pred CCEEEEEEeCChhHHHHHHhcc-------------hHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEEC
Confidence 5679999999999998987642 34667777778899999 999999999999998775 899999
Q ss_pred ccccc
Q 047768 857 GLAKF 861 (1009)
Q Consensus 857 Gla~~ 861 (1009)
|++..
T Consensus 136 GLg~~ 140 (204)
T COG3642 136 GLGEF 140 (204)
T ss_pred Ccccc
Confidence 99974
No 482
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.86 E-value=1.7e-09 Score=87.05 Aligned_cols=60 Identities=38% Similarity=0.617 Sum_probs=37.7
Q ss_pred CccEEEecCcccccccccccccccccceEcCCCcccccccccccccccccCceecccccC
Q 047768 538 SLEYVELQGNSFSGTIPQSLSSLTSIKELDLSQNNFSGQIPKYLENLSFLQYLNLSYNHF 597 (1009)
Q Consensus 538 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l 597 (1009)
+|+.|++++|+|+...+.+|.++++|++|++++|+++...|..|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 556666666666655555666666666666666666655555666666666666666654
No 483
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.86 E-value=1.1e-09 Score=128.68 Aligned_cols=211 Identities=24% Similarity=0.296 Sum_probs=146.0
Q ss_pred HhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc---cchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCC
Q 047768 699 ATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK---GGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 775 (1009)
..+.+.+.+.+.+|.++.++.+.-...|...+.|+...... ...+....+-.+.-..+||-++....- +...
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s-----~~~r 876 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPS-----FPCR 876 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCC-----CCCC
Confidence 44567777888899999999887766665555555432211 111222222222222234544443322 3344
Q ss_pred ceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEec
Q 047768 776 DFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 855 (1009)
Q Consensus 776 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 855 (1009)
...++|++|..++++..-++.... .+..-.......+..+.+|||+. .++|||++|.|.+...++..+++|
T Consensus 877 sP~~L~~~~~~~~~~~Skl~~~~~------~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~ 947 (1205)
T KOG0606|consen 877 SPLPLVGHYLNGGDLPSKLHNSGC------LSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTD 947 (1205)
T ss_pred CCcchhhHHhccCCchhhhhcCCC------cccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCc
Confidence 677899999999999999988663 44444455666788999999998 799999999999999999999999
Q ss_pred cccccccCCC----------------CCCC-----cccc--CCccccccccccccCccccCCCCCCCcccchHHHHHHHH
Q 047768 856 FGLAKFLSAS----------------PLGN-----VVET--PSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLE 912 (1009)
Q Consensus 856 fGla~~~~~~----------------~~~~-----~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~e 912 (1009)
||........ .... .... ........||+.|.|||...+.....++|.|+.|++++|
T Consensus 948 ~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e 1027 (1205)
T KOG0606|consen 948 FGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFE 1027 (1205)
T ss_pred cccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhh
Confidence 9844332211 0000 0000 012344679999999999999999999999999999999
Q ss_pred HHhCCCCCccc
Q 047768 913 IFTRRRPTESM 923 (1009)
Q Consensus 913 lltg~~p~~~~ 923 (1009)
.++|..||...
T Consensus 1028 ~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 1028 VLTGIPPFNAE 1038 (1205)
T ss_pred hhcCCCCCCCc
Confidence 99999999754
No 484
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.86 E-value=1.8e-08 Score=105.75 Aligned_cols=145 Identities=22% Similarity=0.292 Sum_probs=108.4
Q ss_pred CcccccCCceEEEEEEecCCeEEEEEEeecccc-cchHHHHHHHHHHHhcCC--CCcceEEeeeeccccCCCceEEEEEe
Q 047768 707 NTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK-GGSKSFAAECEALRSIRH--RNLIKIVTICSSIDFKGVDFKALVYE 783 (1009)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~~~~~~lv~e 783 (1009)
+.++.|..+.||++... +|+.+++|+...... .....+.+|+++++.+++ ..+.+++.++.... ..+..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~--~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPS--VLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCC--ccCCceEEEE
Confidence 56899999999999875 468899998754332 134678999999999965 44577777754321 1124589999
Q ss_pred ccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcC----------------------------------
Q 047768 784 YMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHC---------------------------------- 829 (1009)
Q Consensus 784 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~---------------------------------- 829 (1009)
|+++.++.+.+... .++..+...++.++++++.+||+..
T Consensus 81 ~i~G~~l~~~~~~~-------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (223)
T cd05154 81 RVDGRVLRDRLLRP-------ELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDE 153 (223)
T ss_pred EeCCEecCCCCCCC-------CCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccc
Confidence 99998887654321 2677777888888888888888521
Q ss_pred -------------------CCCceecCCCCCceeeCC--CCceEEeccccccc
Q 047768 830 -------------------QPPIVHGDLKPSNVLLDH--DMVAHVSDFGLAKF 861 (1009)
Q Consensus 830 -------------------~~~ivHrdlk~~Nill~~--~~~~kl~DfGla~~ 861 (1009)
...++|+|+.+.||+++. ++.+.++||+.+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 154 PPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred cHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 246799999999999998 67789999998863
No 485
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.83 E-value=4e-09 Score=128.96 Aligned_cols=250 Identities=22% Similarity=0.300 Sum_probs=158.6
Q ss_pred CCCCCeEEEEEeecCC--cccccCccccCCCCCCeeeecCCcCCccCCccccCccccccccccccccCCCCCCCCcCCCc
Q 047768 66 GRRNQRVTKLDLRNQS--IGGILSPYVGNLSFLRYINIADNDFHGEIPDRIGNLFRLETLVLANNSFSGRIPTNLSHCSK 143 (1009)
Q Consensus 66 ~~~~~~v~~l~l~~~~--l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 143 (1009)
+.....+++|-+.+|. +.......|..++.|++||||+|.=-+.+|..+++|-+|++|+|++..++ .+|..+++|++
T Consensus 541 ~~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~ 619 (889)
T KOG4658|consen 541 SSENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKK 619 (889)
T ss_pred CCCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHh
Confidence 3334568888888886 44444455888999999999998766799999999999999999999998 89999999999
Q ss_pred CcEEecccccccCCCchHHhhhccCCcCeEeecCccCC--CCCCcccCCccccceeecccCcc-----------------
Q 047768 144 LITFSAHRNNLVGEIPEELISRRLFNLQGLSVGDNQLT--GQLPASIGNLSALRVIDIRTNRL----------------- 204 (1009)
Q Consensus 144 L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~n~l~--~~~p~~~~~l~~L~~L~L~~N~l----------------- 204 (1009)
|.+|++.++.-...+|... ..+.+|++|.+..-... ...-..+.+|.+|+.+.......
T Consensus 620 L~~Lnl~~~~~l~~~~~i~--~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~~~~e~l~~~~~L~~~~~ 697 (889)
T KOG4658|consen 620 LIYLNLEVTGRLESIPGIL--LELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSVLLLEDLLGMTRLRSLLQ 697 (889)
T ss_pred hheeccccccccccccchh--hhcccccEEEeeccccccchhhHHhhhcccchhhheeecchhHhHhhhhhhHHHHHHhH
Confidence 9999999988766665555 56999999998876532 22233445555555555433322
Q ss_pred --------cCCCCcccccccccccccccCccCCCCCCCcccC------CChHHHHHhhCCccCCCCChhhccCCCcccce
Q 047768 205 --------WGKIPITLSQLTSLAYLHVGDNHFSGTIPPSVYN------ISSLVEIYLYGNRFTGSLPIEIGKNLPNLRNF 270 (1009)
Q Consensus 205 --------~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~------l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L 270 (1009)
....+.++..+.+|+.|.+.++.++......... ++++..+...++..-..+-... ..++|+.|
T Consensus 698 ~l~~~~~~~~~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~~r~l~~~~--f~~~L~~l 775 (889)
T KOG4658|consen 698 SLSIEGCSKRTLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCHMLRDLTWLL--FAPHLTSL 775 (889)
T ss_pred hhhhcccccceeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhccccccccchhh--ccCcccEE
Confidence 0123345556667777777776665322222111 2233333333332221111112 25677777
Q ss_pred eccccccCCCCCCCcCcccccccccccccccccc-cccccccccccccccc
Q 047768 271 VIYTNNFTGSLPDSFSNASNLEVLHLAENQFRGQ-VSINFNGLKDLSMLGL 320 (1009)
Q Consensus 271 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~~~~f~~l~~L~~L~L 320 (1009)
.+..+.....+.+....+..++.+-+..+.+.+. .-....+++++..+.+
T Consensus 776 ~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~~l~~l~~i~~~~l 826 (889)
T KOG4658|consen 776 SLVSCRLLEDIIPKLKALLELKELILPFNKLEGLRMLCSLGGLPQLYWLPL 826 (889)
T ss_pred EEecccccccCCCHHHHhhhcccEEecccccccceeeecCCCCceeEeccc
Confidence 7777666555555555555555555666665555 2344444444444433
No 486
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.81 E-value=3.2e-09 Score=85.37 Aligned_cols=61 Identities=28% Similarity=0.491 Sum_probs=53.3
Q ss_pred CCCCeeeccccccCCCccccccCCCCccEEEecCcccccccccccccccccceEcCCCccc
Q 047768 513 KSLVRLGIARNQFSGQIPVTLGACTSLEYVELQGNSFSGTIPQSLSSLTSIKELDLSQNNF 573 (1009)
Q Consensus 513 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 573 (1009)
++|++|++++|+|+...+..|.++++|++|++++|+++...|.+|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4688899999999866667889999999999999999988888999999999999999975
No 487
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.81 E-value=4.8e-09 Score=76.98 Aligned_cols=41 Identities=51% Similarity=0.922 Sum_probs=29.7
Q ss_pred hhhHHHHHHHHHhcC-CCCCCCCCCccCCCCCCCCCccceeeC
Q 047768 25 ETDCLSLLAIKSQLH-DPLGVTSSWNRSACVNLCQHWTGVTCG 66 (1009)
Q Consensus 25 ~~d~~aLl~~k~~~~-~~~~~~~sW~~~~~~~~c~~w~gv~C~ 66 (1009)
++|++||++||+++. +|.+.+.+|+.+...++| +|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C-~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPC-SWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CC-CSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCe-eeccEEeC
Confidence 579999999999998 577899999976323556 89999996
No 488
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.77 E-value=8.7e-08 Score=104.80 Aligned_cols=178 Identities=16% Similarity=0.187 Sum_probs=136.8
Q ss_pred CCceEEEEEEecCCeEEEEEEeecccccchHHHHHHHHHHHhcCCCCcceEEeeeeccccCCCceEEEEEeccCC-CCHH
Q 047768 713 SFGFVYKGVLHENGMLVAVKVINLEQKGGSKSFAAECEALRSIRHRNLIKIVTICSSIDFKGVDFKALVYEYMQN-GSLE 791 (1009)
Q Consensus 713 ~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~-gsL~ 791 (1009)
...+.|++....+|..|++|+++............-+++++++.|+|+|++..++....|. ....++||+|.++ ++|.
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~-D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFG-DLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccC-cceEEEEEecCCCCchHH
Confidence 3468899999999999999999665555554556678899999999999999887644343 3577899999976 4787
Q ss_pred HHHhccCCCC---------CccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEecccccccc
Q 047768 792 EWLHQRDDQL---------GICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 862 (1009)
Q Consensus 792 ~~l~~~~~~~---------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~ 862 (1009)
++--...... .....++...|.++.|+..||.++|+. |..-+-+.+++|+++.+.+++|+..|....+
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeee
Confidence 7654332221 123477889999999999999999999 9999999999999999999999988877655
Q ss_pred CCCCCCCccccCCccccccccccccCccccCCCCCCCcccchHHHHHHHHHHhCCCC
Q 047768 863 SASPLGNVVETPSSSIGVKGTIGYVAPEYGLGGEASMRGGVYSYGILLLEIFTRRRP 919 (1009)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltg~~p 919 (1009)
...+. |.+.+ -.+-|.=.+|.+++.+.||..-
T Consensus 444 ~~d~~----------------------~~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 444 QEDPT----------------------EPLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred cCCCC----------------------cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 43310 11111 2356888999999999999654
No 489
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.77 E-value=4.5e-09 Score=128.50 Aligned_cols=129 Identities=23% Similarity=0.347 Sum_probs=74.0
Q ss_pred CCCCeeeecCCcCCccCCccccCccccccccccccc--cCCCCCCCCcCCCcCcEEecccccccCCCchHHhhhccCCcC
Q 047768 94 SFLRYINIADNDFHGEIPDRIGNLFRLETLVLANNS--FSGRIPTNLSHCSKLITFSAHRNNLVGEIPEELISRRLFNLQ 171 (1009)
Q Consensus 94 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~--l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~ 171 (1009)
...+...+-+|.+. .++..... ++|++|-+..|. +.-..+..|..++.|+.|||++|.-.+.+|..+ +.|-+|+
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~~~-~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I--~~Li~Lr 598 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSSEN-PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSI--GELVHLR 598 (889)
T ss_pred hheeEEEEeccchh-hccCCCCC-CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHH--hhhhhhh
Confidence 44555556566554 44433322 256666666664 331222235556666666666665555666665 4566666
Q ss_pred eEeecCccCCCCCCcccCCccccceeecccCcccCCCCcccccccccccccccCcc
Q 047768 172 GLSVGDNQLTGQLPASIGNLSALRVIDIRTNRLWGKIPITLSQLTSLAYLHVGDNH 227 (1009)
Q Consensus 172 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 227 (1009)
+|+|++..++ .+|..+++|..|.+|++..+.-...+|.....|++|++|.+....
T Consensus 599 yL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 599 YLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred cccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 6666666666 566666666666666666665544555666666666666665443
No 490
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.74 E-value=8.5e-08 Score=91.29 Aligned_cols=140 Identities=21% Similarity=0.293 Sum_probs=98.1
Q ss_pred cCCcccccCCceEEEEEEecCCeEEEEEEeeccc--------ccchHHHHHHHHHHHhcCCCCc--ceEEeeeeccccCC
Q 047768 705 SSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ--------KGGSKSFAAECEALRSIRHRNL--IKIVTICSSIDFKG 774 (1009)
Q Consensus 705 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~~~~~ 774 (1009)
....+-+|+-+.|+++.+. |+.+.||.=-... .-..++..+|++.+.+++--.| .+++.+ +
T Consensus 11 ~l~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~--D----- 81 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFI--D----- 81 (229)
T ss_pred cceeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEE--e-----
Confidence 4567889999999999985 7777777431111 1113567789999998852222 223322 1
Q ss_pred CceEEEEEeccCC-CCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCCCC---c
Q 047768 775 VDFKALVYEYMQN-GSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDM---V 850 (1009)
Q Consensus 775 ~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~---~ 850 (1009)
...-.++|||+++ .++.+++...... .....-...++..|-+.+.-||.. +|||+||..+||++..++ .
T Consensus 82 ~~~~~i~ME~~~g~~~vk~~i~~~~~~----~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~ 154 (229)
T KOG3087|consen 82 TYGGQIYMEFIDGASTVKDFILSTMED----ESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQIT 154 (229)
T ss_pred cCCCeEEEEeccchhHHHHHHHHHccC----cccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCc
Confidence 1334799999966 3788888765432 122222367888999999999999 999999999999996655 4
Q ss_pred eEEecccccc
Q 047768 851 AHVSDFGLAK 860 (1009)
Q Consensus 851 ~kl~DfGla~ 860 (1009)
+.++|||++.
T Consensus 155 ~~lIdfgls~ 164 (229)
T KOG3087|consen 155 PILIDFGLSS 164 (229)
T ss_pred eEEEeecchh
Confidence 6899999985
No 491
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.73 E-value=6.7e-08 Score=96.42 Aligned_cols=126 Identities=25% Similarity=0.288 Sum_probs=82.0
Q ss_pred eEEEEEEecCCeEEEEEEeeccc--------------c--------c----chHHHHHHHHHHHhcCCC--CcceEEeee
Q 047768 716 FVYKGVLHENGMLVAVKVINLEQ--------------K--------G----GSKSFAAECEALRSIRHR--NLIKIVTIC 767 (1009)
Q Consensus 716 ~V~~~~~~~~~~~vavK~~~~~~--------------~--------~----~~~~~~~E~~~l~~l~h~--niv~l~~~~ 767 (1009)
.||.|... +|..||||+.+... . . ......+|.+.|.++... ++.+.+++
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~- 78 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY- 78 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE-
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE-
Confidence 38999874 78899999985321 0 0 013567899999999655 56777765
Q ss_pred eccccCCCceEEEEEeccC--CCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHH-hhcCCCCceecCCCCCcee
Q 047768 768 SSIDFKGVDFKALVYEYMQ--NGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYL-HHHCQPPIVHGDLKPSNVL 844 (1009)
Q Consensus 768 ~~~~~~~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~L-H~~~~~~ivHrdlk~~Nil 844 (1009)
....+||||++ +..+....... ++......++.+++..+..+ |.. ||||+|+.+.||+
T Consensus 79 --------~~~~ivME~I~~~G~~~~~l~~~~--------~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIl 139 (188)
T PF01163_consen 79 --------NRNVIVMEYIGEDGVPLPRLKDVD--------LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNIL 139 (188)
T ss_dssp --------ETTEEEEE--EETTEEGGCHHHCG--------GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEE
T ss_pred --------eCCEEEEEecCCCccchhhHHhcc--------ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEE
Confidence 23479999998 54454433221 11233456777888866664 677 9999999999999
Q ss_pred eCCCCceEEeccccccccC
Q 047768 845 LDHDMVAHVSDFGLAKFLS 863 (1009)
Q Consensus 845 l~~~~~~kl~DfGla~~~~ 863 (1009)
++++ .+.++|||.+....
T Consensus 140 v~~~-~~~iIDf~qav~~~ 157 (188)
T PF01163_consen 140 VDDG-KVYIIDFGQAVDSS 157 (188)
T ss_dssp EETT-CEEE--GTTEEETT
T ss_pred eecc-eEEEEecCcceecC
Confidence 9988 99999999887543
No 492
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.69 E-value=3.8e-07 Score=96.83 Aligned_cols=144 Identities=16% Similarity=0.037 Sum_probs=99.5
Q ss_pred ccccCCceEEEEEEecCCeEEEEEEeecccc-----------cchHHHHHHHHHHHhcC--CCCcceEEeeeeccccCCC
Q 047768 709 IGRGSFGFVYKGVLHENGMLVAVKVINLEQK-----------GGSKSFAAECEALRSIR--HRNLIKIVTICSSIDFKGV 775 (1009)
Q Consensus 709 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~~ 775 (1009)
+-+.....|++..+ +|+.|.||....... .....+.+|.+.+.++. .-.+.+.+++.........
T Consensus 30 v~~~~~rrvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~ 107 (268)
T PRK15123 30 FRELEGRRTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT 107 (268)
T ss_pred EecCCCceEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence 33333345667665 588999997743221 11124788999988884 3333444555432111112
Q ss_pred ceEEEEEeccCCC-CHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCceeeCC-------
Q 047768 776 DFKALVYEYMQNG-SLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNVLLDH------- 847 (1009)
Q Consensus 776 ~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~------- 847 (1009)
...++|+|++++. +|.+++..... .+.+...+..++.+++..+.-||.. ||+|+|++++|||++.
T Consensus 108 ~~s~LVte~l~~~~sL~~~~~~~~~----~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~ 180 (268)
T PRK15123 108 RTSFIITEDLAPTISLEDYCADWAT----NPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREE 180 (268)
T ss_pred ceeEEEEeeCCCCccHHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCC
Confidence 3568999999876 89999864321 1245667788999999999999999 9999999999999975
Q ss_pred CCceEEeccccccc
Q 047768 848 DMVAHVSDFGLAKF 861 (1009)
Q Consensus 848 ~~~~kl~DfGla~~ 861 (1009)
+..+.++||+.++.
T Consensus 181 ~~~~~LIDl~r~~~ 194 (268)
T PRK15123 181 DLKLSVIDLHRAQI 194 (268)
T ss_pred CceEEEEECCcccc
Confidence 46899999998864
No 493
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.64 E-value=1.4e-07 Score=96.03 Aligned_cols=142 Identities=27% Similarity=0.250 Sum_probs=103.5
Q ss_pred HHHHHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeecccc---------------c-------chHHHHHHHHHH
Q 047768 695 ELSKATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQK---------------G-------GSKSFAAECEAL 752 (1009)
Q Consensus 695 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------------~-------~~~~~~~E~~~l 752 (1009)
.+.....-..++.+||-|.-+.||.|... .|.++|||.=+.... . .....++|.++|
T Consensus 85 ~l~~r~~ve~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L 163 (304)
T COG0478 85 ALVKRGIVEAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEAL 163 (304)
T ss_pred HHHHcChHHhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHH
Confidence 33333334556789999999999999986 789999996542210 0 113467899999
Q ss_pred HhcCCC--CcceEEeeeeccccCCCceEEEEEeccCCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 047768 753 RSIRHR--NLIKIVTICSSIDFKGVDFKALVYEYMQNGSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQ 830 (1009)
Q Consensus 753 ~~l~h~--niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ 830 (1009)
.++... .|.+.+++ ....+||||+++--|...- ++......++..|+.-+.-.-..
T Consensus 164 ~~L~~~G~~VP~P~~~---------nRHaVvMe~ieG~eL~~~r-----------~~~en~~~il~~il~~~~~~~~~-- 221 (304)
T COG0478 164 QRLYPEGVKVPKPIAW---------NRHAVVMEYIEGVELYRLR-----------LDVENPDEILDKILEEVRKAYRR-- 221 (304)
T ss_pred HHhhhcCCCCCCcccc---------ccceeeeehcccceeeccc-----------CcccCHHHHHHHHHHHHHHHHHc--
Confidence 999644 77777776 5678999999886664432 12333445666666666666666
Q ss_pred CCceecCCCCCceeeCCCCceEEecccccc
Q 047768 831 PPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 860 (1009)
Q Consensus 831 ~~ivHrdlk~~Nill~~~~~~kl~DfGla~ 860 (1009)
||||+|+.+-||+++++|.+.++||--+.
T Consensus 222 -GiVHGDlSefNIlV~~dg~~~vIDwPQ~v 250 (304)
T COG0478 222 -GIVHGDLSEFNILVTEDGDIVVIDWPQAV 250 (304)
T ss_pred -CccccCCchheEEEecCCCEEEEeCcccc
Confidence 99999999999999999999999997554
No 494
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.53 E-value=3.1e-08 Score=100.38 Aligned_cols=161 Identities=20% Similarity=0.274 Sum_probs=83.8
Q ss_pred cccccccccccccCC--CCCCCCcCCCcCcEEecccccccCCCchHHhhhccCCcCeEeecCccCCCCC-CcccCCcccc
Q 047768 118 FRLETLVLANNSFSG--RIPTNLSHCSKLITFSAHRNNLVGEIPEELISRRLFNLQGLSVGDNQLTGQL-PASIGNLSAL 194 (1009)
Q Consensus 118 ~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L 194 (1009)
++++.|||.+|.|+. .|-.-+.+++.|++|+++.|.+...|...- ..+.+|+.|-|++..+.-.. ...+..++.+
T Consensus 71 ~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp--~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~v 148 (418)
T KOG2982|consen 71 TDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLP--LPLKNLRVLVLNGTGLSWTQSTSSLDDLPKV 148 (418)
T ss_pred hhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCc--ccccceEEEEEcCCCCChhhhhhhhhcchhh
Confidence 344444444444442 122223344444444444444433322110 13456666666666665332 3456677778
Q ss_pred ceeecccCcccCCCCcccccccccccccccCccCCCCCCC--cccCCChHHHHHhhCCccCCCCChhhccCCCcccceec
Q 047768 195 RVIDIRTNRLWGKIPITLSQLTSLAYLHVGDNHFSGTIPP--SVYNISSLVEIYLYGNRFTGSLPIEIGKNLPNLRNFVI 272 (1009)
Q Consensus 195 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L 272 (1009)
+.|.+|.|.+ +.+++.+|.++..-|. .+..++.+..++++-|++. +-+|++..+.+
T Consensus 149 telHmS~N~~--------------rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~--------r~Fpnv~sv~v 206 (418)
T KOG2982|consen 149 TELHMSDNSL--------------RQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLS--------RIFPNVNSVFV 206 (418)
T ss_pred hhhhhccchh--------------hhhccccccccccchhhhhhhcCCcHHHHHHHHHhHH--------hhcccchheee
Confidence 8888877744 4455666666532221 2445567778888888776 23566666777
Q ss_pred cccccCCCC-CCCcCcccccccccccccccc
Q 047768 273 YTNNFTGSL-PDSFSNASNLEVLHLAENQFR 302 (1009)
Q Consensus 273 ~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~ 302 (1009)
..|.+...- -..+..++.+--|+|+.|+|.
T Consensus 207 ~e~PlK~~s~ek~se~~p~~~~LnL~~~~id 237 (418)
T KOG2982|consen 207 CEGPLKTESSEKGSEPFPSLSCLNLGANNID 237 (418)
T ss_pred ecCcccchhhcccCCCCCcchhhhhcccccc
Confidence 777665322 223444444445555555544
No 495
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.47 E-value=1.4e-08 Score=91.18 Aligned_cols=107 Identities=24% Similarity=0.345 Sum_probs=68.8
Q ss_pred EecCCCccCCCCCCCcc-CCCCCCeeeccccccCCCccccccCCCCccEEEecCcccccccccccccccccceEcCCCcc
Q 047768 494 LDLSDNLLNGSLPLGVG-NLKSLVRLGIARNQFSGQIPVTLGACTSLEYVELQGNSFSGTIPQSLSSLTSIKELDLSQNN 572 (1009)
Q Consensus 494 L~Ls~N~l~~~~p~~~~-~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 572 (1009)
.+|++|.|. ..|..|. ..+.++.|+|++|+|+ .+|.++..++.|+.|++++|.|. ..|..+..|.+|..||..+|.
T Consensus 58 i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na 134 (177)
T KOG4579|consen 58 ISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENA 134 (177)
T ss_pred Eecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCCCCc
Confidence 666777666 3444443 3456777777777777 56777777777777777777776 666667677777777777777
Q ss_pred cccccccccccccccCceecccccCcccCCCC
Q 047768 573 FSGQIPKYLENLSFLQYLNLSYNHFEGEVPTK 604 (1009)
Q Consensus 573 l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~ 604 (1009)
+. .+|-.+-.-+.....++.+|++.+..|.+
T Consensus 135 ~~-eid~dl~~s~~~al~~lgnepl~~~~~~k 165 (177)
T KOG4579|consen 135 RA-EIDVDLFYSSLPALIKLGNEPLGDETKKK 165 (177)
T ss_pred cc-cCcHHHhccccHHHHHhcCCcccccCccc
Confidence 76 44444333333344455677777766654
No 496
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.47 E-value=6e-08 Score=98.32 Aligned_cols=185 Identities=20% Similarity=0.273 Sum_probs=122.6
Q ss_pred HHhhhccCCcCeEeecCccCCCC--CCcccCCccccceeecccCcccCCCCcccccccccccccccCccCCCC-CCCccc
Q 047768 161 ELISRRLFNLQGLSVGDNQLTGQ--LPASIGNLSALRVIDIRTNRLWGKIPITLSQLTSLAYLHVGDNHFSGT-IPPSVY 237 (1009)
Q Consensus 161 ~~~~~~l~~L~~L~L~~n~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~ 237 (1009)
..+....+.+++|||.+|+|+.. +..-+.+|+.|++|+|+.|.+...+...-..+.+|+.|-|.+..+.-. ....+.
T Consensus 64 ~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~ 143 (418)
T KOG2982|consen 64 MLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLD 143 (418)
T ss_pred HHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhh
Confidence 33445566777788888887742 234467888888888888888633322214667888888888777632 334456
Q ss_pred CCChHHHHHhhCCccCC---------CCChhh--ccCCCcccceeccccccCCCCCCCcCccccccccccccccccccc-
Q 047768 238 NISSLVEIYLYGNRFTG---------SLPIEI--GKNLPNLRNFVIYTNNFTGSLPDSFSNASNLEVLHLAENQFRGQV- 305 (1009)
Q Consensus 238 ~l~~L~~L~L~~N~l~~---------~ip~~~--~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~- 305 (1009)
.++.+++|.++.|.+.. .+...+ ...++.+..+.++-|++..+. +++..+-+..|.+....
T Consensus 144 ~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~F-------pnv~sv~v~e~PlK~~s~ 216 (418)
T KOG2982|consen 144 DLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIF-------PNVNSVFVCEGPLKTESS 216 (418)
T ss_pred cchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhc-------ccchheeeecCcccchhh
Confidence 67788888888884330 111011 122455556666667766543 46777888888777643
Q ss_pred ccccccccccccccccccccCCCCCCCcchhhhcccccccceEEccCCCCCC
Q 047768 306 SINFNGLKDLSMLGLATNFLGNGAANDLDFVDLLTNCTKLQYLYLADNGFGG 357 (1009)
Q Consensus 306 ~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ 357 (1009)
...+..++.+..|+|+.|+|...+ -.+.+.++++|..|.+++|.+..
T Consensus 217 ek~se~~p~~~~LnL~~~~idswa-----svD~Ln~f~~l~dlRv~~~Pl~d 263 (418)
T KOG2982|consen 217 EKGSEPFPSLSCLNLGANNIDSWA-----SVDALNGFPQLVDLRVSENPLSD 263 (418)
T ss_pred cccCCCCCcchhhhhcccccccHH-----HHHHHcCCchhheeeccCCcccc
Confidence 345777888889999999987644 35788888999999999988764
No 497
>PRK09902 hypothetical protein; Provisional
Probab=98.46 E-value=5.5e-06 Score=83.00 Aligned_cols=159 Identities=18% Similarity=0.151 Sum_probs=113.0
Q ss_pred HHHHHHHhccCccCCcccccCCceEEEEEEecCCeEEEEEEeeccc------ccchHHHHHHHHHHHhcC--CCCcceEE
Q 047768 693 YKELSKATNEFSSSNTIGRGSFGFVYKGVLHENGMLVAVKVINLEQ------KGGSKSFAAECEALRSIR--HRNLIKIV 764 (1009)
Q Consensus 693 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~--h~niv~l~ 764 (1009)
++.+-....++...---|+||-+-|+.-... |+.+-+|.-...- .-....|.+|...+.++. .-.+.+.+
T Consensus 10 f~~~w~~~~~wve~pN~~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv 87 (216)
T PRK09902 10 FNHWWATEGDWVEEPNYRRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV 87 (216)
T ss_pred HHHHHhCCCceecCCCcCCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc
Confidence 3444444444544445677999999997764 5578888764111 224578999999999984 33355555
Q ss_pred eeeeccccCCCceEEEEEeccCC-CCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCce
Q 047768 765 TICSSIDFKGVDFKALVYEYMQN-GSLEEWLHQRDDQLGICNLSLIQRLNIVIDVASAVEYLHHHCQPPIVHGDLKPSNV 843 (1009)
Q Consensus 765 ~~~~~~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Ni 843 (1009)
++...........++|+|-+++ -||.+++.+... .+.+..++..+..+++..++-||.. |+.|+|+.+.||
T Consensus 88 -f~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~----~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khI 159 (216)
T PRK09902 88 -FGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAV----SPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHI 159 (216)
T ss_pred -eeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCc----CCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhhe
Confidence 3322222334456899998764 489999866432 1367778889999999999999999 999999999999
Q ss_pred eeCCCCc--eEEeccccccc
Q 047768 844 LLDHDMV--AHVSDFGLAKF 861 (1009)
Q Consensus 844 ll~~~~~--~kl~DfGla~~ 861 (1009)
+++.++. ++++||.-++.
T Consensus 160 ll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 160 YVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred eecCCCCeeEEEEEhhccch
Confidence 9986666 99999987764
No 498
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.40 E-value=6.9e-09 Score=116.62 Aligned_cols=128 Identities=27% Similarity=0.289 Sum_probs=90.4
Q ss_pred ccccccCCCCccCCCchhhhhhccceeeEecCCCccCCCCCCCccCCCCCCeeeccccccCCCccc-cccCCCCccEEEe
Q 047768 466 LMFFFAPRNKLTGALPQQILEITTLSLSLDLSDNLLNGSLPLGVGNLKSLVRLGIARNQFSGQIPV-TLGACTSLEYVEL 544 (1009)
Q Consensus 466 L~~l~l~~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~l~~L~~L~L 544 (1009)
|...+.+.|.++ .-+..+.+.+....||||+|+++..- .+..++.|++|||+.|.|. .+|. ...++. |..|+|
T Consensus 166 L~~a~fsyN~L~--~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~l 239 (1096)
T KOG1859|consen 166 LATASFSYNRLV--LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNL 239 (1096)
T ss_pred HhhhhcchhhHH--hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhhh-heeeee
Confidence 444455555554 22223444444556889999987432 6778899999999999998 4443 344454 999999
Q ss_pred cCcccccccccccccccccceEcCCCcccccccc-cccccccccCceecccccCcccC
Q 047768 545 QGNSFSGTIPQSLSSLTSIKELDLSQNNFSGQIP-KYLENLSFLQYLNLSYNHFEGEV 601 (1009)
Q Consensus 545 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~g~~ 601 (1009)
++|.++.. ..+.+|.+|+.|||++|-|++.-- .-+..|.+|+.|+|.+|++.+..
T Consensus 240 rnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~p 295 (1096)
T KOG1859|consen 240 RNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCAP 295 (1096)
T ss_pred cccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccCH
Confidence 99998733 357889999999999999986332 23567788899999999987643
No 499
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.40 E-value=1.2e-07 Score=107.92 Aligned_cols=101 Identities=22% Similarity=0.467 Sum_probs=77.1
Q ss_pred HHHHHHHHHhhcCCCCceecCCCCCceeeCCCCceEEeccccccccCCCCCCCcccc-CCccccccccccccCccccCCC
Q 047768 817 DVASAVEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLSASPLGNVVET-PSSSIGVKGTIGYVAPEYGLGG 895 (1009)
Q Consensus 817 ~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~ 895 (1009)
+++.|+.|+|... ++||++|.|++|.+++.+.+|++.|+++............+. +....-......|.|||++...
T Consensus 107 ~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~ 184 (700)
T KOG2137|consen 107 NVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT 184 (700)
T ss_pred cccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence 4558999999764 899999999999999999999999998876554221111111 1111122345689999999998
Q ss_pred CCCCcccchHHHHHHHHHHhCCCC
Q 047768 896 EASMRGGVYSYGILLLEIFTRRRP 919 (1009)
Q Consensus 896 ~~~~~~DvwS~Gvvl~elltg~~p 919 (1009)
..+.++|+||+||++|.+..|..+
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~ 208 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKS 208 (700)
T ss_pred cccccccceeeeeEEEEEecCCcc
Confidence 889999999999999999965554
No 500
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.37 E-value=4.6e-06 Score=85.77 Aligned_cols=111 Identities=25% Similarity=0.267 Sum_probs=85.7
Q ss_pred hHHHHHHHHHHHhcC--CCCcceEEeeeeccccCCCceEEEEEeccCCC-CHHHHHhccCCCCCccCCCHHHHHHHHHHH
Q 047768 742 SKSFAAECEALRSIR--HRNLIKIVTICSSIDFKGVDFKALVYEYMQNG-SLEEWLHQRDDQLGICNLSLIQRLNIVIDV 818 (1009)
Q Consensus 742 ~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i 818 (1009)
.....+|...+..+. .-.+.+.+++....... ....++|+|++++. +|.+++..... .+......++.++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~-~~~s~lite~l~~~~~L~~~~~~~~~------~~~~~~~~ll~~l 127 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGG-GYRSYLITEALPGAQDLRDLLQQWEQ------LDPSQRRELLRAL 127 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCC-ceeEEEEEEeCCCcccHHHHHHhhcc------cchhhHHHHHHHH
Confidence 346778888888774 44455666665443211 24558999999874 89999886432 4556778899999
Q ss_pred HHHHHHHhhcCCCCceecCCCCCceeeCCCC---ceEEecccccccc
Q 047768 819 ASAVEYLHHHCQPPIVHGDLKPSNVLLDHDM---VAHVSDFGLAKFL 862 (1009)
Q Consensus 819 a~~l~~LH~~~~~~ivHrdlk~~Nill~~~~---~~kl~DfGla~~~ 862 (1009)
+..++-||.. ||+|+|+++.|||++.+. .+.++||+-++..
T Consensus 128 ~~~i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 128 ARLIAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 9999999999 999999999999999887 8999999987753
Done!