BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047770
(298 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana
GN=UBP13 PE=1 SV=1
Length = 1115
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
Query: 35 SGLFEAGNYKWRLVFYPNGNKQDDGDGYISLYLKIDGCNTCSDNWSVHVNYKLFVLYKDN 94
S +F G YKWR++ +P GN D ++S+YL + WS + + L V+ + N
Sbjct: 73 SDVFVVGGYKWRILIFPKGNNVD----HLSMYLDVADAANLPYGWSRYSQFSLAVVNQVN 128
Query: 95 EFLAHRAEGPIRRFDHNKHEWGFGKFLSLDTLHE----YLANDTLVLGAEVFV 143
+ R E +F+ + +WGF F+ L L+E YL NDT+++ AEV V
Sbjct: 129 NRYSIRKETQ-HQFNARESDWGFTSFMPLSELYEPTRGYLVNDTVLIEAEVAV 180
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 130 LANDTLVLGAEVFVIVSTGRKECVSILKNP---DGATTR-TWKIPKFSALDDNPRFSQAY 185
+ N LV G + + T + ++NP D + + TW IP F+ L+ +S +
Sbjct: 19 VPNPDLVEGPQPMEVAQTD--PAATAVENPPPEDPPSLKFTWTIPMFTRLNTRKHYSDVF 76
Query: 186 TVDERKWKLRLYPMGTAAGKGEFLALHLMLVDVLDPAPKRAVFAEFDLLLVDQKRHSNSF 245
V KW++ ++P G + L+++L + D + + +++F L +V+Q + S
Sbjct: 77 VVGGYKWRILIFPKGNNV---DHLSMYLDVADAANLPYGWSRYSQFSLAVVNQVNNRYSI 133
Query: 246 KRQYSKWFSAQCYVLGHRKFISLTDLYQSD---VVGDTLIIELQ 286
+++ F+A+ G F+ L++LY+ +V DT++IE +
Sbjct: 134 RKETQHQFNARESDWGFTSFMPLSELYEPTRGYLVNDTVLIEAE 177
>sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana
GN=UBP12 PE=1 SV=2
Length = 1116
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
Query: 35 SGLFEAGNYKWRLVFYPNGNKQDDGDGYISLYLKIDGCNTCSDNWSVHVNYKLFVLYKDN 94
S +F G YKWR++ +P GN D ++S+YL + + WS + + L V+ + +
Sbjct: 74 SDVFVVGGYKWRILIFPKGNNVD----HLSMYLDVSDAASLPYGWSRYAQFSLAVVNQIH 129
Query: 95 EFLAHRAEGPIRRFDHNKHEWGFGKFLSLDTLHE----YLANDTLVLGAEVFV 143
R E +F+ + +WGF F+ L L++ YL NDT+++ AEV V
Sbjct: 130 TRYTVRKETQ-HQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVAV 181
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 76/163 (46%), Gaps = 9/163 (5%)
Query: 130 LANDTLVLGAEVFVIVSTGRKECVSILKNP--DGATTR-TWKIPKFSALDDNPRFSQAYT 186
+ N LV G + V+ ++ P D T + TW IP FS + +S +
Sbjct: 19 VPNSDLVDGPAQPMEVTQPETAASTVENQPAEDPPTLKFTWTIPNFSRQNTRKHYSDVFV 78
Query: 187 VDERKWKLRLYPMGTAAGKGEFLALHLMLVDVLDPAPKRAVFAEFDLLLVDQKRHSNSFK 246
V KW++ ++P G + L+++L + D + +A+F L +V+Q + +
Sbjct: 79 VGGYKWRILIFPKGNNV---DHLSMYLDVSDAASLPYGWSRYAQFSLAVVNQIHTRYTVR 135
Query: 247 RQYSKWFSAQCYVLGHRKFISLTDLYQSD---VVGDTLIIELQ 286
++ F+A+ G F+ L++LY +V DT+++E +
Sbjct: 136 KETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAE 178
>sp|Q8T126|FNKC_DICDI Probable inactive serine/threonine-protein kinase fnkC
OS=Dictyostelium discoideum GN=fnkC PE=3 SV=1
Length = 1304
Score = 56.6 bits (135), Expect = 2e-07, Method: Composition-based stats.
Identities = 66/299 (22%), Positives = 133/299 (44%), Gaps = 46/299 (15%)
Query: 14 YTVELNSYSKLFRPEKLEIFESGLFEAGNYKWRLVFYPNGNKQDDGDGYISLYLKIDGCN 73
+ + +N++S + + F S +F WR FY NG K G +S++ I C+
Sbjct: 1028 WIISINNFSN-----RKDQFYSPIFSLIGSNWRCKFYSNG-KDASTSGKLSIF--ISNCD 1079
Query: 74 TCSDNWSV----HVNYKLFVLYKDNEFLAHRAEGP----IRRFDHNKHEWGFGKFLSLDT 125
++ +++ ++YKL ++ + N + + I+ F+H G+G F+ L +
Sbjct: 1080 LLNNPFTIFLEKSISYKLTLINQKNPNESIQKSSSHTFSIKEFNH-----GYGSFIGLFS 1134
Query: 126 L----HEYLANDTL---VLGAEVFVIVSTGRKECVSILKNPDGATTRTWKIPKFSALDDN 178
L + +L N+T+ + A +V+T K + + + ++ +P S +
Sbjct: 1135 LLNPNNGFLVNNTIKVRIDAAPTSPLVNTYDKYNIGLNQ------AFSYSVPMMSKKSE- 1187
Query: 179 PRFSQAYTVDERKWKLRLYPMGTAAGKGEFLALHLMLVDVLDPAPKRAVFAEFDLLLVDQ 238
P S + RKW +++YPMG + ++++ L D + F L L+ Q
Sbjct: 1188 PFISPIFMSCGRKWIIKIYPMGQPSSN--YMSVFLEYRDEGEEN------VHFSLELISQ 1239
Query: 239 KRHSNSFKRQYSKWFSAQCYVLGHRKFISLTDLYQSD---VVGDTLIIELQFLSVSAVR 294
S K F+++ G+ KFI ++ L D +V DT+I+ + L + ++
Sbjct: 1240 LYPEQSIKYWVQYRFNSKSNSFGYPKFIGVSTLMDPDMGFLVNDTIILNVSILQLKPIK 1298
>sp|O22286|BPM3_ARATH BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis
thaliana GN=BPM3 PE=1 SV=1
Length = 408
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 13 HYTVELNSYSKLFRPEKLEIFESGLFEAGNYKWRLVFYPNGNKQDDGDGYISLYLKIDGC 72
+T++ S +K P K +S +F G Y W + FYP+G +D YISL++ +
Sbjct: 28 QFTIQGYSLAKGMSPGKF--IQSDIFSVGGYDWAIYFYPDGKNPEDQSSYISLFIAL--- 82
Query: 73 NTCSDNWSVHVNYKLFVL-------YKDNEFLAHRAEGPIRRFDHNKHEWGFGKFLSLDT 125
SD+ + ++L ++ +K + EG + WG+ +F
Sbjct: 83 --ASDSNDIRALFELTLMDQSGKGKHKVHSHFDRALEGGPYTLKYKGSMWGYKRFFKRSA 140
Query: 126 LH--EYLANDTLVLGAEVFVI 144
L +YL +D LV+ V V+
Sbjct: 141 LETSDYLKDDCLVINCTVGVV 161
>sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana
GN=At5g43560 PE=1 SV=1
Length = 1055
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 37 LFEAGNYKWRLVFYPNGNKQDDGDGYISLYLKIDGCNTCSDNWSVHVNYKLFVLYKDNEF 96
+FE G YKW ++ YP G D ++SL+L + WS + + V KD +
Sbjct: 90 VFEVGGYKWYILIYPQGC---DVCNHLSLFLCVAHHEKLLPGWSHFAQFTIAVSNKDPKK 146
Query: 97 LAHRAEGPIRRFDHNKHEWGFGKFLSLDTLHEYLANDT--LVLGAEVFVI 144
H + RF +H+WG+ KF+ L L E +D+ L + A+V VI
Sbjct: 147 SKH--SDTLHRFWKKEHDWGWKKFIELPKLKEGFIDDSGCLTIKAQVQVI 194
Score = 32.0 bits (71), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 14/140 (10%)
Query: 166 TWKIPKFSALDDNPRFSQAYTVDERKWKLRLYPMGTAAGKGEFLALHLMLVDVLDPAPKR 225
TW I KFS ++ + V KW + +YP G L+L L + P
Sbjct: 72 TWTIEKFSDINKRELRGDVFEVGGYKWYILIYPQGCDVCN--HLSLFLCVAHHEKLLPGW 129
Query: 226 AVFAEFDLLLVD----QKRHSNSFKRQYSKWFSAQCYVLGHRKFISLTDLYQS---DVVG 278
+ FA+F + + + + +HS++ R F + + G +KFI L L + D
Sbjct: 130 SHFAQFTIAVSNKDPKKSKHSDTLHR-----FWKKEHDWGWKKFIELPKLKEGFIDDSGC 184
Query: 279 DTLIIELQFLSVSAVRLLNC 298
T+ ++Q + R C
Sbjct: 185 LTIKAQVQVIRERVDRPFRC 204
>sp|P34568|BAT43_CAEEL BTB and MATH domain-containing protein 43 OS=Caenorhabditis elegans
GN=bath-43 PE=3 SV=2
Length = 451
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 72/174 (41%), Gaps = 25/174 (14%)
Query: 13 HYTVELNSYSKLFRPEKLEIFESGLFEAG---NYKWRLVFYPNGNKQDDGDGYISLYLKI 69
+Y +N++S R E E+ +S F AG KW L P G ++ D Y+SLYL +
Sbjct: 97 NYMWTINNFS-FCREEMGEVLKSSTFSAGCNDKLKWCLRINPKGLDEESRD-YLSLYLLL 154
Query: 70 DGCNTCSDNWSVHVNYKLFVLYKDNEFLAHRAEGPIRRFDHNKHEWGFGKFLS----LDT 125
CN V +K +L E RF K +WGF KF+ LD
Sbjct: 155 VQCNKSE----VRAKFKFSILNAKREETKAMESQRAYRFVQGK-DWGFKKFIRRDFLLDE 209
Query: 126 LHEYLANDTLVLGAEVFVIVSTGRKECVSILKNPDGAT--TRTWKIPKFSALDD 177
+ L D L + EV V+ T N G T ++ +K+P DD
Sbjct: 210 ANGLLPGDRLSIFCEVSVVAET---------VNVTGQTNVSQLFKVPPCRLADD 254
Score = 35.0 bits (79), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 188 DERKWKLRLYPMGTAAGKGEFLALHLMLVDVLDPAPKRAVFAEFDLLLVDQKRHSNSFKR 247
D+ KW LR+ P G ++L+L+L+LV K V A+F +++ KR
Sbjct: 127 DKLKWCLRINPKGLDEESRDYLSLYLLLVQ----CNKSEVRAKFKFSILNAKREETKAME 182
Query: 248 QYSKWFSAQCYVLGHRKFIS---LTDLYQSDVVGDTLIIELQFLSVSAV 293
+ Q G +KFI L D + GD L I F VS V
Sbjct: 183 SQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPGDRLSI---FCEVSVV 228
>sp|Q1EBV6|BPM5_ARATH BTB/POZ and MATH domain-containing protein 5 OS=Arabidopsis
thaliana GN=BPM5 PE=1 SV=1
Length = 410
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 38 FEAGNYKWRLVFYPNGNKQDDGDGYISLYLKIDGCNTCSDNWSVHVNYKLFVL------- 90
F G Y+W + FYP+G +D Y+S+++ + S+ V ++L ++
Sbjct: 55 FSVGGYQWGIFFYPDGKNPEDNSSYVSVFIAL-----ASEGTEVRALFELALVDQSGKGK 109
Query: 91 YKDNEFLAHRAEGPIRRFDHNKHEWGFGKFLSLDTLH--EYLANDTLVLGAEVFVIVS 146
+K + +G + WG+ +F L +YL +D L++ V V+VS
Sbjct: 110 HKVHSHFERSLDGGPYTLKYRGSMWGYKRFFRRSILETSDYLKDDCLIINCTVGVVVS 167
>sp|Q86AY4|Y2340_DICDI TNF receptor-associated factor family protein DDB_G0272340
OS=Dictyostelium discoideum GN=DDB_G0272340 PE=3 SV=2
Length = 449
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 20/116 (17%)
Query: 33 FESGLFEAGNYKWRLVFYPNGNKQDDGDGYISLYL-KIDGCNTCSDNWSVHVNYKLFVLY 91
ES F GN K+++ FYPNG D+ ++S+YL K D D V + +L
Sbjct: 334 IESPEFMVGNLKFKIQFYPNGGLSDESKDFLSIYLYKFD------DQTPSKVQFSFELLN 387
Query: 92 KDNEFLAHRAEGPIRRFDHNKHEWGFGKFLSLDTLHEYLANDTLVLGAEVFVIVST 147
KD F +R F H +++WG+ F+ N++LV FVI ++
Sbjct: 388 KD--FTRNRKLASTNIF-HTENKWGWRSFI----------NNSLVTTQTGFVIQNS 430
>sp|Q9SRV1|BPM4_ARATH BTB/POZ and MATH domain-containing protein 4 OS=Arabidopsis
thaliana GN=BPM4 PE=1 SV=1
Length = 465
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 16/122 (13%)
Query: 35 SGLFEAGNYKWRLVFYPNGNKQDDGDGYISLYLKIDGCNTCSDNWSVHVNYKLFVL---- 90
S F G Y+W + FYP+G +D Y+S+++ + SD V ++L +L
Sbjct: 70 SDTFTVGGYQWAIYFYPDGKNPEDNSAYVSVFIAL-----ASDGTDVRALFELSLLDQSG 124
Query: 91 ---YKDNEFLAHRAEGPIRRFDHNKHEWGFGKF---LSLDTLHEYLANDTLVLGAEVFVI 144
+K + E + WG+ +F L L+T ++L +D L + V V+
Sbjct: 125 KGKHKVHSHFDRALESGPYTLKYRGSMWGYKRFFRRLMLET-SDFLKDDCLKINCTVGVV 183
Query: 145 VS 146
VS
Sbjct: 184 VS 185
>sp|A1L4W5|BPM6_ARATH BTB/POZ and MATH domain-containing protein 6 OS=Arabidopsis
thaliana GN=BPM6 PE=1 SV=1
Length = 415
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
Query: 38 FEAGNYKWRLVFYPNGNKQDDGDGYISLYLKIDGCNTCSDNWSVHVNYKLFVL------- 90
F G Y+W + YP+G +D Y+S+++ + + C++ V ++L ++
Sbjct: 62 FSVGGYQWTIFVYPDGKNPEDNSSYVSVFIVL--ASECTE---VRALFELSLVDQSGKGK 116
Query: 91 YKDNEFLAHRAEGPIRRFDHNKHEWGFGKFL--SLDTLHEYLANDTLVLGAEVFVIVS 146
+K + +G + WG+ +F SL +YL +D L + V V+VS
Sbjct: 117 HKVHSHFNRSLDGGPYTLKYRGSMWGYKRFFRRSLLETSDYLKDDCLKINCTVGVVVS 174
>sp|P41886|BAT41_CAEEL BTB and MATH domain-containing protein 41 OS=Caenorhabditis elegans
GN=bath-41 PE=1 SV=1
Length = 418
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 38 FEAGNYKWRLVFYPNGNKQDDGDGYISLYLKIDGCNTCSDNWSVHVNYKLFVLYKDNEFL 97
F G+Y++ + +PNG K ++ GY+SL+L I+ C + V F
Sbjct: 73 FGDGDYEFVMKLFPNG-KDEETAGYLSLFLLINKCPNPRLRFRV-------------SFT 118
Query: 98 AHRAEGPIRRFDHNKHEWGF--------GKFLSLDTLHE----YLANDTLVLGAEVFV 143
A+GP R NK+ KF SLD L Y+ ND L +G E+ +
Sbjct: 119 VETADGP-RSCHLNKNLVTINRSGIVTASKFFSLDILRSAMNVYIPNDILTIGCELTI 175
>sp|Q8L765|BPM1_ARATH BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis
thaliana GN=BPM1 PE=1 SV=1
Length = 407
Score = 39.7 bits (91), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 35 SGLFEAGNYKWRLVFYPNGNKQDDGDGYISLYLKIDGCNTCSDNWSVHVNYKLFVL---- 90
S F G Y W + FYP+G +D Y+SL++ + S+ V ++L ++
Sbjct: 57 SDTFMVGGYSWAIYFYPDGKSPEDNSSYVSLFIAL-----ASEGADVRALFELTLVDQSG 111
Query: 91 ---YKDNEFLAHRAEGPIRRFDHNKHEWGFGKFLSLDTLH--EYLANDTLVLGAEVFVIV 145
+K + + + WG+ +F +L +YL ++L++ V V+
Sbjct: 112 NGKHKVHSHFGRALDSGPYTLKYRGSMWGYKRFFRRSSLESSDYLKENSLLVRCRVGVVK 171
Query: 146 ST 147
S
Sbjct: 172 SV 173
>sp|Q9M8J9|BPM2_ARATH BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis
thaliana GN=BPM2 PE=1 SV=1
Length = 406
Score = 38.5 bits (88), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 14/121 (11%)
Query: 35 SGLFEAGNYKWRLVFYPNGNKQDDGDGYISLYLKIDGCNTCSDNWSVHVNYKLFVL---- 90
S F G Y W + FYP+G +D Y+SL++ + S+ V ++L ++
Sbjct: 56 SDTFMVGGYSWAIYFYPDGKSPEDNSVYVSLFIAL-----ASEGADVRALFELTLVDQSG 110
Query: 91 ---YKDNEFLAHRAEGPIRRFDHNKHEWGFGKFL--SLDTLHEYLANDTLVLGAEVFVIV 145
+K + E + WG+ +F SL +YL ++ L++ V V+
Sbjct: 111 NERHKVHSHFGRTLESGPYTLKYRGSMWGYKRFFKRSLLESSDYLKDNGLLVRCCVGVVK 170
Query: 146 S 146
S
Sbjct: 171 S 171
>sp|Q7T330|SPOP_DANRE Speckle-type POZ protein OS=Danio rerio GN=spop PE=2 SV=1
Length = 374
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 17/157 (10%)
Query: 14 YTVELNSYSKLFRPEKLEIFESGLFEAG---NYKWRLVFYPNGNKQDDGDGYISLYLKID 70
Y +N++S R E E+ +S F +G KW L P G ++ D L
Sbjct: 34 YMWTINNFS-FCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLL-- 90
Query: 71 GCNTCSDNWSVHVNYKLFVLYKDNEFLAHRAEGPIRRFDHNKHEWGFGKFLS----LDTL 126
+C + V +K +L E RF K +WGF KF+ LD
Sbjct: 91 --VSCPKS-EVRAKFKFSILNAKGEETKAMESQRAYRFVQGK-DWGFKKFIRRDFLLDEA 146
Query: 127 HEYLANDTLVLGAEVFVI---VSTGRKECVSILKNPD 160
+ L +D L L EV V+ V+ + ++++K PD
Sbjct: 147 NGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPD 183
>sp|Q717B2|TDPZ2_MOUSE TD and POZ domain-containing protein 2 OS=Mus musculus GN=Tdpoz2
PE=2 SV=2
Length = 364
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 17/140 (12%)
Query: 45 WRLVFYPNGNKQDDGDGYISLYLKIDGCNTCSDNWSVHVNYKLFVLYKDNEFLAHRAEGP 104
W L +PNG ++ D Y+S+YL + C V ++ ++ E +
Sbjct: 55 WCLRVHPNGFDEESKD-YLSVYLVLVNC----PKRQVRAKFEFWIKNSQGEKYQYTQSLN 109
Query: 105 IRRFDHNKHEWGFGKFLSLDTLHEY----LANDTLVLGAEVFV---IVSTGRKECVSILK 157
+ F K WGF KF+ D+L + L D L L +V + I++ + + +K
Sbjct: 110 VPSF-QRKQNWGFSKFILRDSLLSHRNWLLPKDKLTLCCKVSIVGAILNMPGQNMIPAIK 168
Query: 158 NPDGATT----RTWKIPKFS 173
+P T + W+ P F+
Sbjct: 169 DPRHMLTDDLGKLWENPLFT 188
Score = 34.7 bits (78), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 18/91 (19%)
Query: 161 GATTRTWKIPKFSALDDNPRFSQAYTVDERKWKLRLYPMGTAAGKGEFLALHLMLVDVLD 220
G R K P FS + + +E W LR++P G ++L+++L+LV+
Sbjct: 34 GGIRRKIKSPVFSLVAN----------EEVAWCLRVHPNGFDEESKDYLSVYLVLVN--- 80
Query: 221 PAPKRAVFAEFDLLLVDQKRHSNSFKRQYSK 251
PKR V A+F+ + ++S K QY++
Sbjct: 81 -CPKRQVRAKFEFWI----KNSQGEKYQYTQ 106
>sp|P0CR43|SET5_CRYNB Potential protein lysine methyltransferase SET5 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=SET5 PE=3 SV=1
Length = 449
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 207 EFLALHLMLVDVLDPAPKRAVFAEFDLLLVDQ-KRHSNSF---KRQYSKWFSAQCYVLGH 262
E+ +H+ML +VL+P+P + F LL+ Q R S +++ +WFS + ++
Sbjct: 269 EWHLIHIMLTNVLNPSPTHENYKPFQRLLISQHPRRSKPVPLTEKEVKRWFSFESFL--- 325
Query: 263 RKFISLTDLYQSDVVG 278
+ + L L Q D G
Sbjct: 326 -ELLGLVGLNQEDSGG 340
>sp|P0CR42|SET5_CRYNJ Potential protein lysine methyltransferase SET5 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=SET5 PE=3 SV=1
Length = 449
Score = 37.0 bits (84), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 207 EFLALHLMLVDVLDPAPKRAVFAEFDLLLVDQ-KRHSNSF---KRQYSKWFSAQCYVLGH 262
E+ +H+ML +VL+P+P + F LL+ Q R S +++ +WFS + ++
Sbjct: 269 EWHLIHIMLTNVLNPSPTHENYKPFQRLLISQHPRRSKPVPLTEKEVKRWFSFESFL--- 325
Query: 263 RKFISLTDLYQSDVVG 278
+ + L L Q D G
Sbjct: 326 -ELLGLVGLNQEDSGG 340
>sp|Q54FG0|Y0883_DICDI TNF receptor-associated factor family protein DDB_G0290883
OS=Dictyostelium discoideum GN=DDB_G0290883 PE=3 SV=1
Length = 460
Score = 35.4 bits (80), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 42 NYKWRLVFYPNGNKQDDGDGYISLYLKIDGCNTCSDNWSVHVNYKLFVLYKDNEFLAHRA 101
++ +++ YP G D+ YISLYL++ N + S+ V Y ++ + ++
Sbjct: 352 SHHFQVCVYPKG---DENKEYISLYLRV---NNIEEPNSLKVEYSFTLVN-----VLDKS 400
Query: 102 EGPIRRFDH----NKHEWGFGKFLSLDTLHE---YLANDTLVLGAEVFVIV 145
+ +R D + EWG+GKFL D +++ +L+ND L E+++ +
Sbjct: 401 KSITKRVDKIVFISPKEWGWGKFLLSDLINKENGWLSNDD-KLTIEIYIKI 450
>sp|Q6P8B3|SPOP_XENTR Speckle-type POZ protein OS=Xenopus tropicalis GN=spop PE=2 SV=1
Length = 374
Score = 35.4 bits (80), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 65/157 (41%), Gaps = 17/157 (10%)
Query: 14 YTVELNSYSKLFRPEKLEIFESGLFEAG---NYKWRLVFYPNGNKQDDGDGYISLYLKID 70
Y +N++S R E E+ +S F +G KW L P G ++ D L
Sbjct: 34 YMWTINNFS-FCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLL-- 90
Query: 71 GCNTCSDNWSVHVNYKLFVLYKDNEFLAHRAEGPIRRFDHNKHEWGFGKFLS----LDTL 126
+C + V +K +L E RF K +WGF KF+ LD
Sbjct: 91 --VSCPKS-EVRAKFKFSILNAKGEETKAMESQRAYRFVQGK-DWGFKKFIRRDFLLDEA 146
Query: 127 HEYLANDTLVLGAEVFVI---VSTGRKECVSILKNPD 160
+ L +D L L EV V+ V+ + ++++K P+
Sbjct: 147 NGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPE 183
>sp|Q7ZX06|SPOPA_XENLA Speckle-type POZ protein A OS=Xenopus laevis GN=spop-a PE=2 SV=1
Length = 374
Score = 35.4 bits (80), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 65/157 (41%), Gaps = 17/157 (10%)
Query: 14 YTVELNSYSKLFRPEKLEIFESGLFEAG---NYKWRLVFYPNGNKQDDGDGYISLYLKID 70
Y +N++S R E E+ +S F +G KW L P G ++ D L
Sbjct: 34 YMWTINNFS-FCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLL-- 90
Query: 71 GCNTCSDNWSVHVNYKLFVLYKDNEFLAHRAEGPIRRFDHNKHEWGFGKFLS----LDTL 126
+C + V +K +L E RF K +WGF KF+ LD
Sbjct: 91 --VSCPKS-EVRAKFKFSILNAKGEETKAMESQRAYRFVQGK-DWGFKKFIRRDFLLDEA 146
Query: 127 HEYLANDTLVLGAEVFVI---VSTGRKECVSILKNPD 160
+ L +D L L EV V+ V+ + ++++K P+
Sbjct: 147 NGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPE 183
>sp|Q0IHH9|SPOPB_XENLA Speckle-type POZ protein B OS=Xenopus laevis GN=spop-b PE=2 SV=1
Length = 374
Score = 35.4 bits (80), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 65/157 (41%), Gaps = 17/157 (10%)
Query: 14 YTVELNSYSKLFRPEKLEIFESGLFEAG---NYKWRLVFYPNGNKQDDGDGYISLYLKID 70
Y +N++S R E E+ +S F +G KW L P G ++ D L
Sbjct: 34 YMWTINNFS-FCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLL-- 90
Query: 71 GCNTCSDNWSVHVNYKLFVLYKDNEFLAHRAEGPIRRFDHNKHEWGFGKFLS----LDTL 126
+C + V +K +L E RF K +WGF KF+ LD
Sbjct: 91 --VSCPKS-EVRAKFKFSILNAKGEETKAMESQRAYRFVQGK-DWGFKKFIRRDFLLDEA 146
Query: 127 HEYLANDTLVLGAEVFVI---VSTGRKECVSILKNPD 160
+ L +D L L EV V+ V+ + ++++K P+
Sbjct: 147 NGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPE 183
>sp|Q9VFP2|RDX_DROME Protein roadkill OS=Drosophila melanogaster GN=rdx PE=1 SV=2
Length = 829
Score = 35.4 bits (80), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 55/141 (39%), Gaps = 14/141 (9%)
Query: 14 YTVELNSYSKLFRPEKLEIFESGLFEAG---NYKWRLVFYPNGNKQDDGDGYISLYLKID 70
Y +N++S R E E+ +S F AG KW L P G ++ D L +
Sbjct: 489 YMWTINNFS-FCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYLLLV- 546
Query: 71 GCNTCSDNWSVHVNYKLFVLYKDNEFLAHRAEGPIRRFDHNKHEWGFGKFLS----LDTL 126
CN V +K +L E RF K +WGF KF+ LD
Sbjct: 547 SCN----KSEVRAKFKFSILNAKREETKAMESQRAYRFVQGK-DWGFKKFIRRDFLLDEA 601
Query: 127 HEYLANDTLVLGAEVFVIVST 147
+ L D L + EV V+ +
Sbjct: 602 NGLLPEDKLTIFCEVSVVADS 622
>sp|Q5NVK7|SPOP_PONAB Speckle-type POZ protein OS=Pongo abelii GN=SPOP PE=1 SV=1
Length = 374
Score = 35.4 bits (80), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 17/157 (10%)
Query: 14 YTVELNSYSKLFRPEKLEIFESGLFEAG---NYKWRLVFYPNGNKQDDGDGYISLYLKID 70
Y +N++S R E E+ +S F +G KW L P G ++ D L +
Sbjct: 34 YMWTINNFS-FCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLV- 91
Query: 71 GCNTCSDNWSVHVNYKLFVLYKDNEFLAHRAEGPIRRFDHNKHEWGFGKFLS----LDTL 126
+C + V +K +L E RF K +WGF KF+ LD
Sbjct: 92 ---SCPKS-EVRAKFKFSILNAKGEETKAMESQRAYRFVQGK-DWGFKKFIRRDFLLDEA 146
Query: 127 HEYLANDTLVLGAEVFVI---VSTGRKECVSILKNPD 160
+ L +D L L EV V+ V+ + ++++K P+
Sbjct: 147 NGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPE 183
>sp|Q6ZWS8|SPOP_MOUSE Speckle-type POZ protein OS=Mus musculus GN=Spop PE=1 SV=1
Length = 374
Score = 35.4 bits (80), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 17/157 (10%)
Query: 14 YTVELNSYSKLFRPEKLEIFESGLFEAG---NYKWRLVFYPNGNKQDDGDGYISLYLKID 70
Y +N++S R E E+ +S F +G KW L P G ++ D L +
Sbjct: 34 YMWTINNFS-FCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLV- 91
Query: 71 GCNTCSDNWSVHVNYKLFVLYKDNEFLAHRAEGPIRRFDHNKHEWGFGKFLS----LDTL 126
+C + V +K +L E RF K +WGF KF+ LD
Sbjct: 92 ---SCPKS-EVRAKFKFSILNAKGEETKAMESQRAYRFVQGK-DWGFKKFIRRDFLLDEA 146
Query: 127 HEYLANDTLVLGAEVFVI---VSTGRKECVSILKNPD 160
+ L +D L L EV V+ V+ + ++++K P+
Sbjct: 147 NGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPE 183
>sp|O43791|SPOP_HUMAN Speckle-type POZ protein OS=Homo sapiens GN=SPOP PE=1 SV=1
Length = 374
Score = 35.4 bits (80), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 17/157 (10%)
Query: 14 YTVELNSYSKLFRPEKLEIFESGLFEAG---NYKWRLVFYPNGNKQDDGDGYISLYLKID 70
Y +N++S R E E+ +S F +G KW L P G ++ D L +
Sbjct: 34 YMWTINNFS-FCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLV- 91
Query: 71 GCNTCSDNWSVHVNYKLFVLYKDNEFLAHRAEGPIRRFDHNKHEWGFGKFLS----LDTL 126
+C + V +K +L E RF K +WGF KF+ LD
Sbjct: 92 ---SCPKS-EVRAKFKFSILNAKGEETKAMESQRAYRFVQGK-DWGFKKFIRRDFLLDEA 146
Query: 127 HEYLANDTLVLGAEVFVI---VSTGRKECVSILKNPD 160
+ L +D L L EV V+ V+ + ++++K P+
Sbjct: 147 NGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPE 183
>sp|Q0VCW1|SPOP_BOVIN Speckle-type POZ protein OS=Bos taurus GN=SPOP PE=2 SV=1
Length = 374
Score = 35.4 bits (80), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 17/157 (10%)
Query: 14 YTVELNSYSKLFRPEKLEIFESGLFEAG---NYKWRLVFYPNGNKQDDGDGYISLYLKID 70
Y +N++S R E E+ +S F +G KW L P G ++ D L +
Sbjct: 34 YMWTINNFS-FCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLV- 91
Query: 71 GCNTCSDNWSVHVNYKLFVLYKDNEFLAHRAEGPIRRFDHNKHEWGFGKFLS----LDTL 126
+C + V +K +L E RF K +WGF KF+ LD
Sbjct: 92 ---SCPKS-EVRAKFKFSILNAKGEETKAMESQRAYRFVQGK-DWGFKKFIRRDFLLDEA 146
Query: 127 HEYLANDTLVLGAEVFVI---VSTGRKECVSILKNPD 160
+ L +D L L EV V+ V+ + ++++K P+
Sbjct: 147 NGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPE 183
>sp|Q1CTW0|DAPF_HELPH Diaminopimelate epimerase OS=Helicobacter pylori (strain HPAG1)
GN=dapF PE=1 SV=1
Length = 273
Score = 34.7 bits (78), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 63/154 (40%), Gaps = 12/154 (7%)
Query: 85 YKLFVLYKDNEFLAHRAEGPIRRFDHNKHEWGFGKFLSLDTL-----HEYLANDTLVLGA 139
Y+ + K++ FLA + E IR + N E G + LD + ++ ND+++
Sbjct: 81 YQHAIAPKEHVFLAGKREISIRIEEPNIIESNLGNYKILDVIPALRCEKFFTNDSVLENI 140
Query: 140 EVFVIVSTGRKECVSILKNPDGATTRTWKIPKFSALDDNPRFSQAYTVDERKWKLRLYPM 199
F ++ TG V +KN +G + + + N + A+ ++ L+ Y
Sbjct: 141 PTFYLIDTGVPHLVGFVKNKEGLNSLNTLELRALRHEFNANINIAFIENKETIFLQTYER 200
Query: 200 GT-----AAGKGEFLALHLMLVDVLDPAPKRAVF 228
G A G G +A + + PK+A
Sbjct: 201 GVEDFTLACGTG--MAAVFIAARIFYNTPKKAAL 232
>sp|Q5BL35|SPOLA_DANRE Speckle-type POZ protein-like A OS=Danio rerio GN=spopla PE=2 SV=1
Length = 392
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 71/174 (40%), Gaps = 21/174 (12%)
Query: 14 YTVELNSYSKLFRPEKLEIFESGLFEAG---NYKWRLVFYPNGNKQDDGDGYISLYLKID 70
Y +N++S R E E+ +S F +G KW L P G + D L +
Sbjct: 34 YMWTINNFS-FCREEMGEVLKSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLLLV- 91
Query: 71 GCNTCSDNWSVHVNYKLFVLYKDNEFLAHRAEGPIRRFDHNKHEWGFGKFLS----LDTL 126
+C + V +K +L E RF K +WGF KF+ LD
Sbjct: 92 ---SCPKS-EVRAKFKFSLLNAKREETKAMESQRAYRFVQGK-DWGFKKFIRRDFLLDEA 146
Query: 127 HEYLANDTLVLGAEVFVI---VSTGRKECVSILKNPDGATT----RTWKIPKFS 173
+ L +D L L EV V+ V+ + +++LK P+ + W+ +F+
Sbjct: 147 NGLLPDDKLTLFCEVSVVQDSVNISGQSNMNMLKVPECQLSDDLGNLWECSRFT 200
>sp|Q2M2N2|SPOPL_MOUSE Speckle-type POZ protein-like OS=Mus musculus GN=Spopl PE=2 SV=3
Length = 392
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 71/183 (38%), Gaps = 30/183 (16%)
Query: 14 YTVELNSYSKLFRPEKLEIFESGLFEAG---NYKWRLVFYPNGNKQDDGDGYISLYLKID 70
Y +N++S R E E+ +S F +G KW L P G + D L +
Sbjct: 34 YMWTINNFS-FCREEMGEVLKSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLLLV- 91
Query: 71 GCNTCSDNWSVHVNYKLFVLYKDNEFLAHRAEGPIRRFDHNKHEWGFGKFLS----LDTL 126
+C + V +K +L E RF K +WGF KF+ LD
Sbjct: 92 ---SCPKS-EVRAKFKFSLLNDKREETKAMESQRAYRFVQGK-DWGFKKFIRRDFLLDEA 146
Query: 127 HEYLANDTLVLGAEVFVIVSTGRKECVSILKNPDGAT-TRTWKIPKFSALDD------NP 179
+ L +D L L EV V+ + N G T T T K+P+ +D N
Sbjct: 147 NGLLPDDKLTLFCEVSVVQDSV---------NVSGHTSTNTLKVPECRLAEDLGNLWENT 197
Query: 180 RFS 182
RF+
Sbjct: 198 RFT 200
>sp|Q6IQ16|SPOPL_HUMAN Speckle-type POZ protein-like OS=Homo sapiens GN=SPOPL PE=2 SV=1
Length = 392
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 74/183 (40%), Gaps = 30/183 (16%)
Query: 14 YTVELNSYSKLFRPEKLEIFESGLFEAG---NYKWRLVFYPNGNKQDDGDGYISLYLKID 70
Y +N++S R E E+ +S F +G KW L P G + D L +
Sbjct: 34 YMWTINNFS-FCREEMGEVLKSSTFSSGPSDKMKWCLRVNPKGLDDESKDYLSLYLLLV- 91
Query: 71 GCNTCSDNWSVHVNYKLFVLYKDNEFLAHRAEGPIRRFDHNKHEWGFGKFLS----LDTL 126
+C + V +K +L E RF K +WGF KF+ LD
Sbjct: 92 ---SCPKS-EVRAKFKFSLLNAKREETKAMESQRAYRFVQGK-DWGFKKFIRRDFLLDEA 146
Query: 127 HEYLANDTLVLGAEVFVIVSTGRKECVSILKNPDGAT-TRTWKIPKFSALDD------NP 179
+ L +D L L EV V+ ++ V+I G T T T K+P+ +D N
Sbjct: 147 NGLLPDDKLTLFCEVSVV-----QDSVNI----SGHTNTNTLKVPECRLAEDLGNLWENT 197
Query: 180 RFS 182
RF+
Sbjct: 198 RFT 200
>sp|Q717B4|TDPZ3_MOUSE TD and POZ domain-containing protein 3 OS=Mus musculus GN=Tdpoz3
PE=2 SV=2
Length = 365
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 178 NPRFSQAYTVDERKWKLRLYPMGTAAGKGEFLALHLMLVDVLDPAPKRAVFAEFDLLLVD 237
+P FS + E W LRLYP G ++L+++L L+ L+ + A+F+ +++
Sbjct: 42 SPVFSLEAS-KEVAWCLRLYPNGVDEESKDYLSVYLELLSALE----SPILAKFEFWIIN 96
Query: 238 QKRHSNSFKRQYSKWFSAQCYV-LGHRKF 265
S K Q K + QC++ HR F
Sbjct: 97 ----SQGEKYQSRKISNVQCFLQYEHRGF 121
>sp|A0JMG1|SPOLB_DANRE Speckle-type POZ protein-like B OS=Danio rerio GN=spoplb PE=2 SV=2
Length = 392
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 63/157 (40%), Gaps = 17/157 (10%)
Query: 14 YTVELNSYSKLFRPEKLEIFESGLFEAG---NYKWRLVFYPNGNKQDDGDGYISLYLKID 70
Y +N++S R E E+ S F +G KW L P G + D L +
Sbjct: 34 YMWTINNFS-FCREEMGEVVRSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLLLV- 91
Query: 71 GCNTCSDNWSVHVNYKLFVLYKDNEFLAHRAEGPIRRFDHNKHEWGFGKFLS----LDTL 126
+C + V +K +L E RF K +WGF KF+ LD
Sbjct: 92 ---SCPKS-EVRAKFKFSLLNAKREETKAMESQRAYRFVQGK-DWGFKKFIRRDFLLDEA 146
Query: 127 HEYLANDTLVLGAEVFVI---VSTGRKECVSILKNPD 160
+ L +D L L EV V+ V+ + ++LK P+
Sbjct: 147 NGLLPDDKLTLFCEVSVVQDSVNISGQSNTNMLKVPE 183
>sp|Q6YCH2|TDPZ4_MOUSE TD and POZ domain-containing protein 4 OS=Mus musculus GN=Tdpoz4
PE=2 SV=2
Length = 370
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Query: 188 DERKWKLRLYPMGTAAGKGEFLALHLMLVDVLDPAPKRAVFAEFDLLLVDQKRHSNSFKR 247
D+ W LR+YP G ++++L+L+L+ K +V+A+F++ +++ K + +R
Sbjct: 51 DKMTWCLRVYPTGVDEKNKDYVSLYLILLS----CEKGSVWAKFEVCILNAKGEKCNTER 106
Query: 248 --QYSKWFSAQCYVLGHRKFIS 267
+S+ Q + G KFI+
Sbjct: 107 IPSFSRIQPHQPF--GFEKFIT 126
>sp|Q6U7I1|UBP7_CHICK Ubiquitin carboxyl-terminal hydrolase 7 OS=Gallus gallus GN=USP7
PE=2 SV=1
Length = 1101
Score = 32.3 bits (72), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 42 NYKWRLVFYPNGNKQDDGDGYISLYLKIDGCNTCSDN--WSVHVNYKLFVL-YKDNEFLA 98
N W+++ P + +L+ CN SD+ WS H L ++ YKD+E
Sbjct: 94 NLPWKIMVMPRLYPDRPHQKSVGFFLQ---CNAESDSTSWSCHAQAVLKIINYKDDEKSF 150
Query: 99 HRAEGPIRRFDHNKHEWGFGKFLS 122
R + F H +++WGF F++
Sbjct: 151 SRRISHL--FFHKENDWGFSNFMA 172
>sp|B5Z6T7|DAPF_HELPG Diaminopimelate epimerase OS=Helicobacter pylori (strain G27)
GN=dapF PE=1 SV=1
Length = 272
Score = 32.0 bits (71), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 16/155 (10%)
Query: 85 YKLFVLYKDNEFLAHRAEGPIRRFDHNKHEWGFGKFLSLDTL-----HEYLANDTLVLGA 139
Y+ + K++ FLA + E IR + N E G + LDT+ ++ ND+++
Sbjct: 81 YQHAIAPKEHVFLAGKREISIRIEEPNIIESNLGNYKILDTIPALRCKKFFTNDSVLENI 140
Query: 140 EVFVIVSTGRKECVSILKNPDGATTRTWKIPKFSAL--DDNPRFSQAYTVDERKWKLRLY 197
F ++ TG V +KN + + AL + N + A+ ++ L+ Y
Sbjct: 141 LTFYLIDTGVPHLVGFVKNKK--LLNSLNTLELRALRHEFNANINIAFIENKETIFLQTY 198
Query: 198 PMGT-----AAGKGEFLALHLMLVDVLDPAPKRAV 227
G A G G +A + + PK+A+
Sbjct: 199 ERGVEDFTLACGTG--MAAVFIASHIFYNTPKKAI 231
>sp|Q93009|UBP7_HUMAN Ubiquitin carboxyl-terminal hydrolase 7 OS=Homo sapiens GN=USP7
PE=1 SV=2
Length = 1102
Score = 32.0 bits (71), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 42 NYKWRLV----FYPNGNKQDDGDGYISLYLKIDGCNTCSDN--WSVHVNYKLFVL-YKDN 94
N W+++ FYP+ Q + +L+ CN SD+ WS H L ++ Y+D+
Sbjct: 94 NLPWKIMVMPRFYPDRPHQKS----VGFFLQ---CNAESDSTSWSCHAQAVLKIINYRDD 146
Query: 95 EFLAHRAEGPIRRFDHNKHEWGFGKFLS----LDTLHEYLANDTLVLGAEVFV 143
E R + F H +++WGF F++ D ++ +D + EVFV
Sbjct: 147 EKSFSRRISHL--FFHKENDWGFSNFMAWSEVTDPEKGFIDDDKVTF--EVFV 195
>sp|Q9ZLR5|DAPF_HELPJ Diaminopimelate epimerase OS=Helicobacter pylori (strain J99)
GN=dapF PE=1 SV=1
Length = 273
Score = 32.0 bits (71), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 66/155 (42%), Gaps = 16/155 (10%)
Query: 85 YKLFVLYKDNEFLAHRAEGPIRRFDHNKHEWGFGKFLSLDTL-----HEYLANDTLVLGA 139
Y+ + K++ FLA + E IR + N E G + LDT+ ++ N++++
Sbjct: 81 YQHAIAPKEHVFLAGKREISIRIEEPNIVESNLGNYQILDTIPNLRCKKFFTNNSVLENI 140
Query: 140 EVFVIVSTGRKECVSILKNPDGATTRTWKIPKFSAL--DDNPRFSQAYTVDERKWKLRLY 197
+F +++TG V +KN + + AL + N + A+ ++ L+ Y
Sbjct: 141 PMFYLINTGVPHLVGFVKNK--GLLNSLNTLELRALRHEFNANINIAFIENKETIFLQTY 198
Query: 198 PMGT-----AAGKGEFLALHLMLVDVLDPAPKRAV 227
G A G G +A + + PK+A
Sbjct: 199 ERGVEDFTLACGTG--MAAVFIAARLFHNTPKKAT 231
>sp|Q1MP91|TPIS_LAWIP Triosephosphate isomerase OS=Lawsonia intracellularis (strain
PHE/MN1-00) GN=tpiA PE=3 SV=1
Length = 252
Score = 31.6 bits (70), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 117 FGKFLSLDTLHEYLANDTLVLGAEVF 142
F FL++DT+ E L N T+V+GA+ F
Sbjct: 41 FPPFLAIDTIKEKLKNSTIVIGAQNF 66
>sp|P11467|DG17_DICDI RING finger protein DG17 OS=Dictyostelium discoideum GN=zfaA PE=2
SV=2
Length = 460
Score = 31.2 bits (69), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 68/136 (50%), Gaps = 20/136 (14%)
Query: 18 LNSYSKLFRPE-KLEIFESGLFEAGNYKWRLVFYPNGNKQDDGDGYISLYLKIDGCNTCS 76
+++YS + + + + S + ++ +++ YP G D+ YISLYL++ N
Sbjct: 327 ISNYSSVAKSKLNCQALSSPMLSILSHLFQVCVYPKG---DENKEYISLYLRV---NNIE 380
Query: 77 DNWSVHVNYKLFVLYKDNEFLAHRAEGPIRRFDH----NKHEWGFGKFLSLDTLHE---Y 129
+ S+ V Y ++ + +++ ++ D + WG+GKFL D +++ +
Sbjct: 381 EPNSLKVEYSFTLVN-----VLDKSKSITKKEDKKVFISSEGWGWGKFLLSDLINKENGW 435
Query: 130 LANDTLVLGAEVFVIV 145
L+ND ++ E+++ +
Sbjct: 436 LSNDDKLI-IEIYIKI 450
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,799,638
Number of Sequences: 539616
Number of extensions: 5172807
Number of successful extensions: 8537
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 8484
Number of HSP's gapped (non-prelim): 77
length of query: 298
length of database: 191,569,459
effective HSP length: 117
effective length of query: 181
effective length of database: 128,434,387
effective search space: 23246624047
effective search space used: 23246624047
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)