RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= 047772
         (498 letters)



>d2acya_ d.58.10.1 (A:) Acylphosphatase {Cow (Bos taurus) [TaxId:
           9913]}
          Length = 98

 Score = 27.9 bits (62), Expect = 0.96
 Identities = 9/28 (32%), Positives = 12/28 (42%)

Query: 246 VLFPYFSYMLAEGLGLSGIVSILFTGIV 273
           V F  ++    + LGL G V     G V
Sbjct: 20  VFFRKYTQAEGKKLGLVGWVQNTDQGTV 47


>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium
           amagasakiense [TaxId: 63559]}
          Length = 391

 Score = 27.2 bits (59), Expect = 4.9
 Identities = 8/33 (24%), Positives = 11/33 (33%), Gaps = 1/33 (3%)

Query: 362 HQQALWYSGLRGAMAF-ALALQSVHDLPEGHGQ 393
               L YSG+          +  + DLP G   
Sbjct: 298 SPLILEYSGIGLKSVLDQANVTQLLDLPVGICS 330


>d1xb2b2 d.43.1.1 (B:112-222) Elongation factor Ts (EF-Ts),
           dimerisation domain {Cow (Bos taurus), mitochondrial
           [TaxId: 9913]}
          Length = 111

 Score = 25.8 bits (56), Expect = 7.0
 Identities = 16/83 (19%), Positives = 31/83 (37%), Gaps = 3/83 (3%)

Query: 162 GALI---SATDPVTVLSIFQELGTDMNLYALVFGESVLNDAMAISLYRTMSLVRSHASSG 218
             L+     TD V+    FQ+L   + L  L+  +++ +     S     S   S   +G
Sbjct: 18  TVLVEVNCETDFVSRNLKFQQLVQQVALGTLLHCQNLKDQLSTYSKGFLNSSELSELPAG 77

Query: 219 QNFFMVIVRFLETFVGSILQNLE 241
                 +   L   +G + +N+ 
Sbjct: 78  PEREGSLKDQLALAIGKLGENMI 100


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.326    0.140    0.409 

Gapped
Lambda     K      H
   0.267   0.0621    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,778,589
Number of extensions: 80727
Number of successful extensions: 209
Number of sequences better than 10.0: 1
Number of HSP's gapped: 209
Number of HSP's successfully gapped: 14
Length of query: 498
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 409
Effective length of database: 1,185,626
Effective search space: 484921034
Effective search space used: 484921034
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.2 bits)