Query 047775
Match_columns 386
No_of_seqs 270 out of 2282
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 03:02:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047775.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047775hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2765 Predicted membrane pro 100.0 1.9E-51 4.1E-56 374.9 30.2 372 2-383 9-397 (416)
2 PLN00411 nodulin MtN21 family 100.0 1.5E-29 3.2E-34 242.2 28.0 306 4-383 10-335 (358)
3 PRK11272 putative DMT superfam 100.0 3.2E-27 6.9E-32 222.0 29.4 285 1-379 1-288 (292)
4 PRK11453 O-acetylserine/cystei 100.0 3.4E-27 7.4E-32 222.6 28.7 283 10-382 7-293 (299)
5 PRK11689 aromatic amino acid e 100.0 4.9E-27 1.1E-31 221.0 27.5 285 6-380 3-291 (295)
6 PF06027 DUF914: Eukaryotic pr 100.0 5.8E-27 1.3E-31 219.9 25.7 297 3-378 9-307 (334)
7 PRK15430 putative chlorampheni 100.0 6.5E-26 1.4E-30 213.5 26.2 284 3-380 4-289 (296)
8 TIGR00950 2A78 Carboxylate/Ami 99.9 1.4E-25 3E-30 207.4 25.2 209 142-371 51-259 (260)
9 PRK10532 threonine and homoser 99.9 7.9E-25 1.7E-29 205.8 29.7 279 5-383 10-288 (293)
10 TIGR00817 tpt Tpt phosphate/ph 99.9 7.1E-24 1.5E-28 200.3 23.4 218 148-383 75-300 (302)
11 PTZ00343 triose or hexose phos 99.9 4.1E-22 8.9E-27 191.5 27.4 226 134-377 114-349 (350)
12 TIGR03340 phn_DUF6 phosphonate 99.9 6.1E-23 1.3E-27 192.0 20.9 212 144-373 69-280 (281)
13 COG0697 RhaT Permeases of the 99.9 1.1E-20 2.3E-25 176.9 28.1 212 144-377 76-288 (292)
14 TIGR00688 rarD rarD protein. T 99.9 1.6E-21 3.5E-26 179.9 21.2 253 7-351 2-255 (256)
15 KOG4314 Predicted carbohydrate 99.9 7E-22 1.5E-26 166.0 9.3 237 131-382 46-282 (290)
16 TIGR00776 RhaT RhaT L-rhamnose 99.8 2.3E-19 5.1E-24 168.1 23.0 220 135-376 56-288 (290)
17 KOG4510 Permease of the drug/m 99.8 4.1E-20 9E-25 162.3 10.1 216 150-376 109-325 (346)
18 PF08449 UAA: UAA transporter 99.8 1.1E-16 2.4E-21 151.2 25.2 239 133-381 63-302 (303)
19 COG5006 rhtA Threonine/homoser 99.7 1.1E-15 2.3E-20 133.9 23.6 218 134-382 71-288 (292)
20 COG2962 RarD Predicted permeas 99.7 7.8E-15 1.7E-19 131.9 23.5 205 147-379 81-286 (293)
21 PF04142 Nuc_sug_transp: Nucle 99.6 1.6E-13 3.6E-18 124.8 22.5 223 134-367 14-244 (244)
22 KOG3912 Predicted integral mem 99.6 4.3E-13 9.4E-18 119.1 20.5 221 150-375 98-333 (372)
23 KOG1441 Glucose-6-phosphate/ph 99.6 2.4E-14 5.2E-19 133.2 12.3 228 133-384 82-315 (316)
24 KOG2234 Predicted UDP-galactos 99.6 7.9E-12 1.7E-16 115.8 28.6 233 135-380 90-326 (345)
25 KOG2766 Predicted membrane pro 99.5 5.3E-15 1.1E-19 129.6 2.3 282 3-377 14-300 (336)
26 KOG1580 UDP-galactose transpor 99.3 3E-11 6.4E-16 105.0 10.0 216 147-376 94-313 (337)
27 KOG1443 Predicted integral mem 99.2 9.5E-10 2.1E-14 99.4 19.1 226 132-376 78-315 (349)
28 COG2510 Predicted membrane pro 99.2 3.2E-10 7E-15 89.5 10.4 134 232-376 4-139 (140)
29 KOG1581 UDP-galactose transpor 99.1 2.4E-07 5.2E-12 84.1 25.6 230 133-377 82-314 (327)
30 PF00892 EamA: EamA-like trans 99.1 2.2E-09 4.7E-14 87.2 11.6 125 241-375 1-125 (126)
31 COG2510 Predicted membrane pro 99.1 2E-09 4.2E-14 85.1 10.4 136 8-210 4-139 (140)
32 PF06800 Sugar_transport: Suga 99.0 4.9E-08 1.1E-12 88.9 18.3 218 135-373 42-268 (269)
33 PF00892 EamA: EamA-like trans 99.0 2.7E-10 5.8E-15 92.6 3.3 62 148-209 64-125 (126)
34 PF03151 TPT: Triose-phosphate 99.0 2.8E-08 6E-13 84.0 15.0 144 232-376 1-153 (153)
35 PRK13499 rhamnose-proton sympo 98.9 5.9E-07 1.3E-11 85.1 23.5 240 135-377 70-342 (345)
36 KOG1444 Nucleotide-sugar trans 98.9 2.9E-07 6.2E-12 84.6 19.1 223 134-380 77-304 (314)
37 KOG1583 UDP-N-acetylglucosamin 98.8 2E-08 4.4E-13 89.7 9.6 233 131-375 61-313 (330)
38 PF13536 EmrE: Multidrug resis 98.8 1.7E-08 3.6E-13 81.0 6.9 63 150-213 47-109 (113)
39 PF05653 Mg_trans_NIPA: Magnes 98.7 1.5E-07 3.3E-12 88.3 12.7 233 136-380 51-296 (300)
40 KOG1442 GDP-fucose transporter 98.7 9.3E-09 2E-13 91.6 3.0 212 155-381 119-332 (347)
41 TIGR00950 2A78 Carboxylate/Ami 98.7 2.6E-07 5.7E-12 85.2 12.2 58 148-205 202-259 (260)
42 TIGR03340 phn_DUF6 phosphonate 98.6 1.4E-06 3E-11 81.5 16.6 134 233-377 3-136 (281)
43 PRK02971 4-amino-4-deoxy-L-ara 98.6 3.8E-07 8.3E-12 74.5 9.8 123 231-380 2-126 (129)
44 KOG1582 UDP-galactose transpor 98.6 1.7E-06 3.6E-11 77.3 13.9 227 132-378 104-334 (367)
45 TIGR00803 nst UDP-galactose tr 98.6 2E-06 4.4E-11 77.5 14.9 185 173-373 33-221 (222)
46 PLN00411 nodulin MtN21 family 98.5 7E-07 1.5E-11 86.0 10.4 64 150-213 268-331 (358)
47 PRK15430 putative chlorampheni 98.5 6.4E-06 1.4E-10 77.6 15.5 138 228-375 5-144 (296)
48 KOG2922 Uncharacterized conser 98.4 4.2E-06 9.1E-11 76.9 11.9 228 136-378 65-308 (335)
49 COG5070 VRG4 Nucleotide-sugar 98.4 2.5E-06 5.3E-11 74.2 9.8 228 134-380 68-300 (309)
50 PRK10532 threonine and homoser 98.4 3.7E-06 8.1E-11 79.1 11.7 64 148-211 219-282 (293)
51 TIGR00688 rarD rarD protein. T 98.3 2.1E-05 4.7E-10 72.4 16.0 136 231-376 2-142 (256)
52 PRK15051 4-amino-4-deoxy-L-ara 98.3 1.2E-06 2.7E-11 69.7 6.5 64 146-209 45-108 (111)
53 COG4975 GlcU Putative glucose 98.3 1.2E-07 2.6E-12 83.5 0.5 220 134-374 55-283 (288)
54 PRK11689 aromatic amino acid e 98.3 8.4E-06 1.8E-10 76.8 11.5 64 147-210 224-287 (295)
55 PRK11453 O-acetylserine/cystei 98.2 1.9E-05 4.2E-10 74.5 12.2 66 147-212 224-289 (299)
56 PRK11272 putative DMT superfam 98.2 9.7E-06 2.1E-10 76.2 9.9 63 148-210 223-285 (292)
57 PF03151 TPT: Triose-phosphate 98.1 3.2E-05 6.9E-10 65.2 11.2 73 136-208 79-151 (153)
58 PF13536 EmrE: Multidrug resis 98.1 3E-05 6.4E-10 62.1 9.8 77 303-380 34-110 (113)
59 PRK15051 4-amino-4-deoxy-L-ara 98.1 4E-05 8.7E-10 61.0 10.4 67 310-376 43-109 (111)
60 TIGR00817 tpt Tpt phosphate/ph 98.0 1.2E-05 2.7E-10 75.9 7.3 63 148-210 231-293 (302)
61 PTZ00343 triose or hexose phos 97.9 9.7E-05 2.1E-09 71.3 12.0 68 141-208 279-346 (350)
62 PRK02971 4-amino-4-deoxy-L-ara 97.8 7.7E-05 1.7E-09 60.9 6.8 69 144-212 54-124 (129)
63 COG2962 RarD Predicted permeas 97.7 0.00083 1.8E-08 61.3 12.8 138 229-376 5-144 (293)
64 PRK10452 multidrug efflux syst 97.6 0.00046 1E-08 55.4 9.3 70 312-381 38-108 (120)
65 PF06027 DUF914: Eukaryotic pr 97.6 0.0015 3.4E-08 62.0 14.3 77 303-380 79-155 (334)
66 TIGR00776 RhaT RhaT L-rhamnose 97.6 0.00029 6.2E-09 66.2 9.2 70 141-210 214-288 (290)
67 COG0697 RhaT Permeases of the 97.5 0.0049 1.1E-07 57.2 16.0 142 229-380 5-147 (292)
68 PRK09541 emrE multidrug efflux 97.5 0.0012 2.5E-08 52.3 9.3 68 312-379 38-106 (110)
69 COG2076 EmrE Membrane transpor 97.3 0.0022 4.7E-08 49.9 9.3 66 313-378 39-105 (106)
70 PRK11431 multidrug efflux syst 97.3 0.0028 6.1E-08 49.7 9.2 66 313-378 38-104 (105)
71 PRK10650 multidrug efflux syst 97.1 0.0055 1.2E-07 48.3 9.3 64 313-376 44-108 (109)
72 PRK10452 multidrug efflux syst 97.0 0.0014 3.1E-08 52.6 5.7 67 146-212 38-105 (120)
73 PRK09541 emrE multidrug efflux 96.9 0.0023 5.1E-08 50.6 5.7 64 147-210 39-103 (110)
74 PF05653 Mg_trans_NIPA: Magnes 96.8 0.0099 2.1E-07 56.0 10.4 119 227-375 3-121 (300)
75 PF04657 DUF606: Protein of un 96.8 0.054 1.2E-06 44.8 13.4 131 232-373 2-138 (138)
76 PRK13499 rhamnose-proton sympo 96.7 0.038 8.2E-07 52.8 13.5 141 228-376 4-153 (345)
77 PRK10650 multidrug efflux syst 96.7 0.005 1.1E-07 48.6 6.2 62 147-208 44-106 (109)
78 PRK11431 multidrug efflux syst 96.7 0.0056 1.2E-07 48.0 6.5 63 147-209 38-101 (105)
79 COG2076 EmrE Membrane transpor 96.7 0.0047 1E-07 48.1 5.7 62 148-209 40-102 (106)
80 PF08449 UAA: UAA transporter 96.7 0.074 1.6E-06 50.2 15.1 73 307-380 68-140 (303)
81 COG5006 rhtA Threonine/homoser 96.2 0.034 7.3E-07 49.9 8.8 74 136-209 207-281 (292)
82 PF04142 Nuc_sug_transp: Nucle 96.0 0.039 8.5E-07 50.4 8.9 67 314-380 27-93 (244)
83 PF00893 Multi_Drug_Res: Small 96.0 0.018 3.9E-07 44.2 5.6 54 147-200 38-92 (93)
84 PF00893 Multi_Drug_Res: Small 96.0 0.031 6.7E-07 42.9 6.8 55 313-367 38-93 (93)
85 PF06800 Sugar_transport: Suga 95.5 0.19 4.2E-06 46.2 11.3 66 141-206 198-267 (269)
86 PF06379 RhaT: L-rhamnose-prot 95.5 1.9 4.1E-05 40.9 17.8 234 137-376 72-340 (344)
87 PF10639 UPF0546: Uncharacteri 95.4 0.051 1.1E-06 43.0 6.1 61 148-208 51-112 (113)
88 KOG4510 Permease of the drug/m 95.1 0.01 2.3E-07 53.5 1.5 137 228-378 35-171 (346)
89 KOG2765 Predicted membrane pro 95.0 0.056 1.2E-06 51.3 6.0 147 3-213 243-393 (416)
90 COG3238 Uncharacterized protei 94.7 1.2 2.5E-05 37.2 12.5 139 230-377 4-147 (150)
91 PF06379 RhaT: L-rhamnose-prot 94.0 1.5 3.2E-05 41.6 13.0 141 228-377 4-154 (344)
92 COG4975 GlcU Putative glucose 93.2 0.03 6.5E-07 50.0 0.6 132 232-379 3-139 (288)
93 TIGR00803 nst UDP-galactose tr 92.8 0.15 3.2E-06 45.8 4.4 58 150-207 164-221 (222)
94 KOG1441 Glucose-6-phosphate/ph 92.1 0.13 2.9E-06 48.4 3.2 64 146-209 243-306 (316)
95 PF04657 DUF606: Protein of un 91.8 1 2.2E-05 37.2 7.9 55 153-207 79-138 (138)
96 PF10639 UPF0546: Uncharacteri 91.0 0.48 1E-05 37.5 4.8 59 315-373 52-111 (113)
97 KOG4314 Predicted carbohydrate 90.9 0.2 4.3E-06 43.3 2.7 65 315-379 64-128 (290)
98 KOG2922 Uncharacterized conser 87.9 0.22 4.7E-06 46.5 0.9 122 225-376 15-136 (335)
99 KOG1580 UDP-galactose transpor 84.3 1.9 4.2E-05 38.5 4.9 64 149-212 252-315 (337)
100 KOG1443 Predicted integral mem 82.6 19 0.00041 33.8 10.7 145 7-208 164-313 (349)
101 KOG1444 Nucleotide-sugar trans 80.7 42 0.00091 31.6 12.4 71 142-212 232-302 (314)
102 PRK02237 hypothetical protein; 79.3 12 0.00027 29.1 7.1 37 342-378 71-107 (109)
103 KOG2234 Predicted UDP-galactos 79.3 60 0.0013 31.0 15.2 62 316-377 104-165 (345)
104 KOG3912 Predicted integral mem 77.5 7.2 0.00016 36.0 6.2 64 313-376 95-158 (372)
105 PF02694 UPF0060: Uncharacteri 74.1 10 0.00022 29.5 5.4 38 342-379 69-106 (107)
106 PF04342 DUF486: Protein of un 73.5 4.1 8.8E-05 31.6 3.1 30 345-374 77-106 (108)
107 COG3169 Uncharacterized protei 68.0 28 0.00062 26.6 6.4 33 344-376 83-115 (116)
108 PF02694 UPF0060: Uncharacteri 65.7 6.9 0.00015 30.4 2.9 54 159-212 51-105 (107)
109 PRK02237 hypothetical protein; 62.5 7.9 0.00017 30.2 2.7 42 171-212 66-107 (109)
110 TIGR02865 spore_II_E stage II 61.3 2.4E+02 0.0052 30.4 14.7 44 165-208 11-54 (764)
111 COG1742 Uncharacterized conser 60.7 18 0.0004 28.0 4.4 43 170-212 64-106 (109)
112 COG3238 Uncharacterized protei 60.5 43 0.00094 28.0 7.0 52 157-208 88-144 (150)
113 KOG1581 UDP-galactose transpor 58.4 6.3 0.00014 36.7 1.8 71 133-207 240-310 (327)
114 PF13127 DUF3955: Protein of u 57.5 7.8 0.00017 27.2 1.8 44 3-46 2-47 (63)
115 COG1742 Uncharacterized conser 50.9 46 0.001 25.8 5.1 37 342-378 70-106 (109)
116 PF04342 DUF486: Protein of un 48.2 1.1E+02 0.0025 23.8 6.9 51 158-208 55-106 (108)
117 PF07857 DUF1632: CEO family ( 47.0 59 0.0013 29.8 6.2 116 139-254 56-206 (254)
118 COG3086 RseC Positive regulato 46.9 46 0.001 27.5 4.9 57 325-383 69-130 (150)
119 KOG4831 Unnamed protein [Funct 46.0 13 0.00028 28.9 1.5 59 151-209 65-124 (125)
120 PF07857 DUF1632: CEO family ( 45.2 57 0.0012 29.9 5.9 24 232-255 1-24 (254)
121 KOG1583 UDP-N-acetylglucosamin 39.9 1.1E+02 0.0023 28.5 6.6 49 162-210 266-314 (330)
122 PF11742 DUF3302: Protein of u 39.6 1.5E+02 0.0033 21.8 8.2 62 230-291 5-69 (78)
123 KOG1442 GDP-fucose transporter 39.1 2.8 6.2E-05 38.4 -3.4 59 319-377 117-175 (347)
124 COG5070 VRG4 Nucleotide-sugar 35.7 61 0.0013 29.0 4.3 61 144-204 230-290 (309)
125 TIGR02230 ATPase_gene1 F0F1-AT 34.3 2.2E+02 0.0048 22.0 7.0 55 262-317 37-91 (100)
126 KOG2766 Predicted membrane pro 32.6 4.7 0.0001 36.7 -3.1 65 314-378 88-152 (336)
127 PF01350 Flavi_NS4A: Flaviviru 31.5 3E+02 0.0066 22.8 7.8 59 321-383 65-123 (144)
128 KOG1582 UDP-galactose transpor 28.5 1.8E+02 0.004 27.0 6.2 54 159-212 281-334 (367)
129 COG3169 Uncharacterized protei 28.3 46 0.00099 25.5 2.0 30 179-208 84-113 (116)
130 PRK15015 carbon starvation pro 25.1 3.6E+02 0.0078 28.5 8.3 31 172-209 98-128 (701)
131 KOG4831 Unnamed protein [Funct 25.1 51 0.0011 25.7 1.8 55 320-374 68-123 (125)
132 PF05297 Herpes_LMP1: Herpesvi 24.7 25 0.00053 32.5 0.0 52 156-207 41-94 (381)
133 PF11368 DUF3169: Protein of u 23.5 2.6E+02 0.0056 25.4 6.5 20 11-30 14-33 (248)
134 COG3086 RseC Positive regulato 22.0 53 0.0011 27.2 1.4 27 159-185 69-95 (150)
135 PRK13108 prolipoprotein diacyl 21.9 3.6E+02 0.0078 27.1 7.5 25 356-380 254-278 (460)
136 PF04387 PTPLA: Protein tyrosi 21.8 38 0.00082 28.8 0.6 45 11-56 49-97 (164)
137 PF06645 SPC12: Microsomal sig 20.2 1.6E+02 0.0035 21.4 3.6 23 342-364 22-44 (76)
No 1
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=100.00 E-value=1.9e-51 Score=374.89 Aligned_cols=372 Identities=43% Similarity=0.725 Sum_probs=290.6
Q ss_pred chhhHHHHHHHHHHHHHHHhhHHHHHHHHhc--CCCcEEeeeecchhHHHHHHHHHHH--HHHHHHhhhccccccchhhh
Q 047775 2 GWRYRAGLFLISAVVIIWVTSAEVTQDIFSD--YKQPFAVTYLGASLMVVYLPVAFLK--DWFCNLLKRRSSKSVKDAET 77 (386)
Q Consensus 2 ~~~~~~g~~~~l~~~~~w~~~~~~~~~~~~~--~~~P~~~~~~~~~~~~i~lp~~~~~--~~~~~~~~~~~~~~~~~~~~ 77 (386)
.||+.+|+++++++.++|+++++++|.++++ |+|||++||++++.+++|+|.+.+. +|+....|. .+......++
T Consensus 9 ~~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~-~~~~~~~~~e 87 (416)
T KOG2765|consen 9 RWRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRS-KRSNHAIMEE 87 (416)
T ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhc-cccchhhhhh
Confidence 4899999999999999999999999999997 6699999999999999999854432 333323221 1111111111
Q ss_pred hhccccc-cCCCccccchhhhhhccccccCCcccCCCcccCccccccc------------cccCCCCCCHHHHHHHHHHH
Q 047775 78 LNETSAA-LNSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKL------------KDDAHKEPTTREIATIGFYI 144 (386)
Q Consensus 78 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~ 144 (386)
++..+ .+.+.+|.+-|.+.+....+++......+++++++..+.. .-+.+++++.++..+.++.+
T Consensus 88 --~d~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~f 165 (416)
T KOG2765|consen 88 --ADAEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFF 165 (416)
T ss_pred --hhhhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHH
Confidence 11111 1122222222222222222222222222222211111100 01124456778999999999
Q ss_pred HHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCccccccccc
Q 047775 145 APIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAA 224 (386)
Q Consensus 145 ~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~ 224 (386)
|++||.+|++++.|+.||+++..+++.+++-+||.+++.++..||+++.|.+++++++.|++++...++...+ +.
T Consensus 166 c~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~-----~~ 240 (416)
T KOG2765|consen 166 CPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNS-----DL 240 (416)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccc-----cC
Confidence 9999999999999999999999999999999999999999999999999999999999999999988654322 12
Q ss_pred CCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHH
Q 047775 225 NGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEE 304 (386)
Q Consensus 225 ~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~ 304 (386)
..+....|+++++++|+.||+|.++.||...++++++++.+++|++|+++++++||+.++++..+.|. +++|.+.+ ..
T Consensus 241 ~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~-F~lP~~~q-~~ 318 (416)
T KOG2765|consen 241 PASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEER-FELPSSTQ-FS 318 (416)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCc-ccCCCCce-eE
Confidence 45567899999999999999999999999987768999999999999999999999999999998776 88887654 55
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccchhhhc
Q 047775 305 VVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRLSKK 383 (386)
Q Consensus 305 ~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~~~~ 383 (386)
.++.+++++++++.++|.+++-.++|..+++++++++|+|++.|+++.|.++++.+++|.+.|++|++++++.++..++
T Consensus 319 ~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~~~~~ 397 (416)
T KOG2765|consen 319 LVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSENSKK 397 (416)
T ss_pred eeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccccccc
Confidence 6777788899999999999999999999999999999999999999999999999999999999999999987655443
No 2
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.97 E-value=1.5e-29 Score=242.22 Aligned_cols=306 Identities=13% Similarity=0.090 Sum_probs=215.3
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCcEEeeeecchhHHHH-HHHHHHHHHHHHHhhhccccccchhhhhhccc
Q 047775 4 RYRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVY-LPVAFLKDWFCNLLKRRSSKSVKDAETLNETS 82 (386)
Q Consensus 4 ~~~~g~~~~l~~~~~w~~~~~~~~~~~~~~~~P~~~~~~~~~~~~i~-lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (386)
|..+.++.++++.+.+++...+.|..++++.+|+.++.+|+....++ +|+.+.. +|.+..
T Consensus 10 ~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~--------~~~~~~----------- 70 (358)
T PLN00411 10 REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFT--------NRSRSL----------- 70 (358)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHH--------HHhccc-----------
Confidence 44568889999999999999999999999999999999998886554 5554431 111100
Q ss_pred cccCCCccccchhhhhhccccccCCcccCCCcccCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 047775 83 AALNSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAALART 162 (386)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~ 162 (386)
++.+++++.+.++.+.+. +..+.+++.|++|+
T Consensus 71 -----------------------------------------------~~~~~~~~~~l~l~g~~g-~~~~~~~~~gl~~t 102 (358)
T PLN00411 71 -----------------------------------------------PPLSVSILSKIGLLGFLG-SMYVITGYIGIEYS 102 (358)
T ss_pred -----------------------------------------------CcchHHHHHHHHHHHHHH-HHHHHHHHHHHhhc
Confidence 001234444444433332 34566899999999
Q ss_pred chhhHHHhhcccHHHHHHHHHHh------ccccchHHHHHHHHHhhhceEEEEecCCCCc-cc---------ccc--ccc
Q 047775 163 SVASTTVLSSTSGLFTLFIGAFM------GQDTLNVAKVVAVLVSMAGVAMTTLGKTWAA-DE---------SQF--SAA 224 (386)
Q Consensus 163 ~~~~~~~i~~~~p~~~~lls~~~------~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~-~~---------~~~--~~~ 224 (386)
++++++++.++.|+++.++++++ +|||+++++++|++++++|+.++...++... .+ ... ...
T Consensus 103 sa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 182 (358)
T PLN00411 103 NPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSS 182 (358)
T ss_pred cHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccccccCC
Confidence 99999999999999999999999 6999999999999999999998775432110 00 000 001
Q ss_pred CCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CceecCCChhHH
Q 047775 225 NGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIE-PKFTIPHSAKME 303 (386)
Q Consensus 225 ~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e-~~~~~~~~~~~~ 303 (386)
...+...|+++.++++++||+|.++.|+..++++........ .++++.....++ .....+.+ ..+....+.. .
T Consensus 183 ~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~---~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~-~ 256 (358)
T PLN00411 183 SNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFL---YTVCVSIVTSMI--GLVVEKNNPSVWIIHFDIT-L 256 (358)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHH---HHHHHHHHHHHH--HHHHccCCcccceeccchH-H
Confidence 122345699999999999999999999987654332211111 112221111111 01111100 0012223333 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccchhhhc
Q 047775 304 EVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRLSKK 383 (386)
Q Consensus 304 ~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~~~~ 383 (386)
..++|.+++ +.++|.+|++++++.+|++++++.+++|+++++++++++||++++.+++|+++|+.|+++.+++++++.|
T Consensus 257 ~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~~~ 335 (358)
T PLN00411 257 ITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANEEK 335 (358)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 457888876 6789999999999999999999999994449999999999999999999999999999999887666544
No 3
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.96 E-value=3.2e-27 Score=222.04 Aligned_cols=285 Identities=16% Similarity=0.100 Sum_probs=206.8
Q ss_pred CchhhHHHHH-HHHHHHHHHHhhHHHHHHHHhcCCCcEEeeeecchhHHHH-HHHHHHHHHHHHHhhhccccccchhhhh
Q 047775 1 MGWRYRAGLF-LISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVY-LPVAFLKDWFCNLLKRRSSKSVKDAETL 78 (386)
Q Consensus 1 ~~~~~~~g~~-~~l~~~~~w~~~~~~~~~~~~~~~~P~~~~~~~~~~~~i~-lp~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (386)
|..|..+.++ .++.+.++|+.+...+|...+ +.+|+.++..|.....+. +|+... ++++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~--------~~~~~~-------- 63 (292)
T PRK11272 1 MRFRQLLPLFGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLLAFLLL--------RGHPLP-------- 63 (292)
T ss_pred CchHHHHHHHHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHH--------hCCCCC--------
Confidence 5566666554 778889999998888887766 567999999998876554 443221 111000
Q ss_pred hccccccCCCccccchhhhhhccccccCCcccCCCcccCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047775 79 NETSAALNSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAA 158 (386)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 158 (386)
+.++.......+...+...+.+++.+
T Consensus 64 ------------------------------------------------------~~~~~~~~~~~g~~~~~~~~~~~~~~ 89 (292)
T PRK11272 64 ------------------------------------------------------TLRQWLNAALIGLLLLAVGNGMVTVA 89 (292)
T ss_pred ------------------------------------------------------cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01222222222222333466788899
Q ss_pred h-cccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCCCcchhhhHHHH
Q 047775 159 L-ARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGL 237 (386)
Q Consensus 159 l-~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~G~~l~l 237 (386)
. ++++++.++++.++.|+++.+++++ +|||+++++++|++++++|+.++..+++. +....|+++++
T Consensus 90 ~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~------------~~~~~G~l~~l 156 (292)
T PRK11272 90 EHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNL------------SGNPWGAILIL 156 (292)
T ss_pred HHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCccc------------ccchHHHHHHH
Confidence 8 9999999999999999999999986 69999999999999999999887543211 12457999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHHHHHHHHHHHHH
Q 047775 238 LSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLS 317 (386)
Q Consensus 238 ~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i~~~~i~~s~l~ 317 (386)
+++++||.|.+..||..++ ++.. ...+...++...+.+. ... .+.......+...|..+++.++++++++
T Consensus 157 ~a~~~~a~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~i~~l~i~~s~~~ 226 (292)
T PRK11272 157 IASASWAFGSVWSSRLPLP--VGMM---AGAAEMLAAGVVLLIA---SLL--SGERLTALPTLSGFLALGYLAVFGSIIA 226 (292)
T ss_pred HHHHHHHHHHHHHHhcCCC--cchH---HHHHHHHHHHHHHHHH---HHH--cCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997542 2211 1112122222222221 111 1111222234567889999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccch
Q 047775 318 DYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDR 379 (386)
Q Consensus 318 ~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~ 379 (386)
+.+|++++++.++..+++..+++|+++++++++++||++++.+++|+++|+.|+++.++.++
T Consensus 227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~ 288 (292)
T PRK11272 227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY 288 (292)
T ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999555999999999999999999999999999999877544
No 4
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.96 E-value=3.4e-27 Score=222.58 Aligned_cols=283 Identities=16% Similarity=0.193 Sum_probs=202.2
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCCcEEeeeecchhHHHHHHHHHHHHHHHHHhhhccccccchhhhhhccccccCCCc
Q 047775 10 FLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFLKDWFCNLLKRRSSKSVKDAETLNETSAALNSPM 89 (386)
Q Consensus 10 ~~~l~~~~~w~~~~~~~~~~~~~~~~P~~~~~~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (386)
++.++++++|+.+...+|...++ .+|+.++.+|.....+.+.. +. +++ +
T Consensus 7 l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~-~~--------~~~-~-------------------- 55 (299)
T PRK11453 7 VLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIF-FV--------ARP-K-------------------- 55 (299)
T ss_pred HHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHH-Hh--------cCC-C--------------------
Confidence 56888999999988888887766 67999999997764433211 11 111 0
Q ss_pred cccchhhhhhccccccCCcccCCCcccCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cchhhHH
Q 047775 90 RHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAALAR-TSVASTT 168 (386)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~~ 168 (386)
..++.....++.. .+....+++.+++| .++++++
T Consensus 56 ------------------------------------------~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~a~~a~ 90 (299)
T PRK11453 56 ------------------------------------------VPLNLLLGYGLTI---SFGQFAFLFCAINFGMPAGLAS 90 (299)
T ss_pred ------------------------------------------CchHHHHHHHHHH---HHHHHHHHHHHHHhcCCHHHHH
Confidence 0122333333322 12233466789988 5889999
Q ss_pred HhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCCCcchhhhHHHHHHHHHHHHHHH
Q 047775 169 VLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTV 248 (386)
Q Consensus 169 ~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v 248 (386)
++.++.|+++.+++++++|||+++++++|++++++|+.++..++.. ..+....|+++++.++++||+|.+
T Consensus 91 ~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~----------~~~~~~~G~~l~l~aal~~a~~~v 160 (299)
T PRK11453 91 LVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLN----------GQHVAMLGFMLTLAAAFSWACGNI 160 (299)
T ss_pred HHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCC----------CcchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988754321 111234799999999999999999
Q ss_pred HHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc---eecCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 047775 249 LLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPK---FTIPHSAKMEEVVLANGFVGSVLSDYFWALCV 325 (386)
Q Consensus 249 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~---~~~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~ 325 (386)
+.||..++++... ......+..+++.+... ......+.+.. ...+.+...|..++|.++++++++|.+|++++
T Consensus 161 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l 236 (299)
T PRK11453 161 FNKKIMSHSTRPA-VMSLVVWSALIPIIPFF---VASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLL 236 (299)
T ss_pred HHHHHhcccCccc-hhHHHHHHHHHHHHHHH---HHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999865432222 11112222222222111 11111111100 00134566789999999999999999999999
Q ss_pred HhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccchhhh
Q 047775 326 VWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRLSK 382 (386)
Q Consensus 326 ~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~~~ 382 (386)
++.+|.+++...+++|.++++++++++||+++..+++|+++|+.|+++..++++.+|
T Consensus 237 ~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~~~~ 293 (299)
T PRK11453 237 GRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLRWRK 293 (299)
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchhhhc
Confidence 999999999999999444999999999999999999999999999999887766443
No 5
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.96 E-value=4.9e-27 Score=221.05 Aligned_cols=285 Identities=13% Similarity=0.145 Sum_probs=198.8
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhcCCCcEEeeeecchhHHHHHHHHHHHHHHHHHhhhccccccchhhhhhcccccc
Q 047775 6 RAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFLKDWFCNLLKRRSSKSVKDAETLNETSAAL 85 (386)
Q Consensus 6 ~~g~~~~l~~~~~w~~~~~~~~~~~~~~~~P~~~~~~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (386)
.++.++.+.+.++|+.+....|... +..+|+.+..+|.....+++.. +. ++++.++
T Consensus 3 ~~~~l~~l~a~~~Wg~~~~~~k~~~-~~~~P~~~~~~R~~~a~l~l~~-~~--------~~~~~~~-------------- 58 (295)
T PRK11689 3 QKATLIGLIAILLWSTMVGLIRGVS-ESLGPVGGAAMIYSVSGLLLLL-TV--------GFPRLRQ-------------- 58 (295)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHH-ccCChHHHHHHHHHHHHHHHHH-Hc--------ccccccc--------------
Confidence 4577889999999999666666544 4468999999997775554321 11 0110000
Q ss_pred CCCccccchhhhhhccccccCCcccCCCcccCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc----c
Q 047775 86 NSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAALA----R 161 (386)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~----~ 161 (386)
..++.. ..+ ++.....+.+++.|++ +
T Consensus 59 ----------------------------------------------~~~~~~-~~~---~l~~~~~~~~~~~a~~~~~~~ 88 (295)
T PRK11689 59 ----------------------------------------------FPKRYL-LAG---GLLFVSYEICLALSLGYANTR 88 (295)
T ss_pred ----------------------------------------------ccHHHH-HHH---hHHHHHHHHHHHHHHHHhhcc
Confidence 011222 222 2223344556666665 4
Q ss_pred cchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCCCcchhhhHHHHHHHH
Q 047775 162 TSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAM 241 (386)
Q Consensus 162 ~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~ 241 (386)
+++++++++.++.|+++.+++++++|||+++++++|++++++|++++..++.....++ . ..+..+...|++++++|++
T Consensus 89 ~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~-~-~~~~~~~~~G~~~~l~aa~ 166 (295)
T PRK11689 89 RQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAE-L-INNIASNPLSYGLAFIGAF 166 (295)
T ss_pred ccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhh-h-hhccccChHHHHHHHHHHH
Confidence 6788899999999999999999999999999999999999999999886542110000 0 0011234569999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHHHHHHHHHHHHHHHHH
Q 047775 242 SYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYFW 321 (386)
Q Consensus 242 ~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i~~~~i~~s~l~~~l~ 321 (386)
+||.|.++.||..+++ ++... .....+ ..+++. .... .+ ...+.+...|..+++.++ +++++|.+|
T Consensus 167 ~~A~~~v~~k~~~~~~-~~~~~--~~~~~~----~~l~~~---~~~~-~~--~~~~~~~~~~~~l~~~~~-~t~~~~~l~ 232 (295)
T PRK11689 167 IWAAYCNVTRKYARGK-NGITL--FFILTA----LALWIK---YFLS-PQ--PAMVFSLPAIIKLLLAAA-AMGFGYAAW 232 (295)
T ss_pred HHHHHHHHHhhccCCC-CchhH--HHHHHH----HHHHHH---HHHh-cC--ccccCCHHHHHHHHHHHH-HHHHHHHHH
Confidence 9999999999987542 33221 111111 111111 1111 11 222345567877888885 699999999
Q ss_pred HHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccchh
Q 047775 322 ALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRL 380 (386)
Q Consensus 322 ~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~ 380 (386)
++++++.+|+.+++..+++|+++++++++++||+++..+++|+++|+.|+++....+|+
T Consensus 233 ~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~~ 291 (295)
T PRK11689 233 NVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATRR 291 (295)
T ss_pred HHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHhH
Confidence 99999999999999999995559999999999999999999999999999888765543
No 6
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.96 E-value=5.8e-27 Score=219.91 Aligned_cols=297 Identities=21% Similarity=0.323 Sum_probs=224.6
Q ss_pred hhhHHHHHHHHHHHHHHHhhHHHHHHHHhc-CCCcEEeeeecchhHHH-HHHHHHHHHHHHHHhhhccccccchhhhhhc
Q 047775 3 WRYRAGLFLISAVVIIWVTSAEVTQDIFSD-YKQPFAVTYLGASLMVV-YLPVAFLKDWFCNLLKRRSSKSVKDAETLNE 80 (386)
Q Consensus 3 ~~~~~g~~~~l~~~~~w~~~~~~~~~~~~~-~~~P~~~~~~~~~~~~i-~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (386)
||..+++++-=..+++-++.+..++++.++ .+.|.+.++++.....+ +-|... +|++.++.
T Consensus 9 ~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~--------~r~~~~~~--------- 71 (334)
T PF06027_consen 9 RRFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILL--------YRRGFKKW--------- 71 (334)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhh--------hccccccc---------
Confidence 444556666666666777777777777775 78899999888666443 333222 12211100
Q ss_pred cccccCCCccccchhhhhhccccccCCcccCCCcccCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 047775 81 TSAALNSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAALA 160 (386)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 160 (386)
. . ...++..+. ++.+++++.+|++...|++
T Consensus 72 ----------------------~------------------------~---~~~~~~w~y-~lla~~Dv~aN~~~v~a~~ 101 (334)
T PF06027_consen 72 ----------------------L------------------------K---VLKRPWWKY-FLLALLDVEANYLVVLAYQ 101 (334)
T ss_pred ----------------------h------------------------h---hcchhHHHH-HHHHHHHHHHHHHHHHHhh
Confidence 0 0 011223333 3346689999999999999
Q ss_pred ccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCCCcchhhhHHHHHHH
Q 047775 161 RTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSA 240 (386)
Q Consensus 161 ~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa 240 (386)
||+.+.++++.+++.++++++|++++|+|+++.+++|++++++|++++...|....+++ ...++..+||++++.||
T Consensus 102 yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~----~~~~~~i~GDll~l~~a 177 (334)
T PF06027_consen 102 YTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDS----SSGSNPILGDLLALLGA 177 (334)
T ss_pred cccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccC----CCCCccchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998775432211 13456789999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHHHHHHHHHHHHHHHH
Q 047775 241 MSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYF 320 (386)
Q Consensus 241 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i~~~~i~~s~l~~~l 320 (386)
++||+++++.|+..+++ +...++++.|+++.++..+.+..+...++|. .+++.+.+..++..++ +..+-|.+
T Consensus 178 ~lya~~nV~~E~~v~~~----~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~---~~w~~~~~~~~v~~~~-~lf~~y~l 249 (334)
T PF06027_consen 178 ILYAVSNVLEEKLVKKA----PRVEFLGMLGLFGFIISGIQLAILERSGIES---IHWTSQVIGLLVGYAL-CLFLFYSL 249 (334)
T ss_pred HHHHHHHHHHHHhcccC----CHHHHHHHHHHHHHHHHHHHHHheehhhhhc---cCCChhhHHHHHHHHH-HHHHHHHH
Confidence 99999999999998742 3467788889999988877765555555543 3445555544443333 56777888
Q ss_pred HHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccc
Q 047775 321 WALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSD 378 (386)
Q Consensus 321 ~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~ 378 (386)
....++..+|+...+......|.++++|++++|+++++..++|.++|++|+++++..+
T Consensus 250 ~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~ 307 (334)
T PF06027_consen 250 VPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE 307 (334)
T ss_pred HHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence 8999999999999998888877799999999999999999999999999999997654
No 7
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.95 E-value=6.5e-26 Score=213.52 Aligned_cols=284 Identities=12% Similarity=0.080 Sum_probs=196.2
Q ss_pred hhhHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCcEEeeeecchhHHHH-HHHHHHHHHHHHHhhhccccccchhhhhhcc
Q 047775 3 WRYRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVY-LPVAFLKDWFCNLLKRRSSKSVKDAETLNET 81 (386)
Q Consensus 3 ~~~~~g~~~~l~~~~~w~~~~~~~~~~~~~~~~P~~~~~~~~~~~~i~-lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (386)
+++.+|++++++..++|+.+...+|.. .+ .+|..++..|.....++ +++.... ++....
T Consensus 4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~-~~~~~~~~~R~~~a~~~l~~~~~~~--------~~~~~~---------- 63 (296)
T PRK15430 4 KQTRQGVLLALAAYFIWGIAPAYFKLI-YY-VPADEILTHRVIWSFFFMVVLMSIC--------RQWSYL---------- 63 (296)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHh-cC-CCHHHHHHHHHHHHHHHHHHHHHHH--------ccHHHH----------
Confidence 577789999999999999999888865 33 56999999997776553 3432221 110000
Q ss_pred ccccCCCccccchhhhhhccccccCCcccCCCcccCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 047775 82 SAALNSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAALAR 161 (386)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 161 (386)
.+ . ..++++... .+.+++.....+.++++|+++
T Consensus 64 ---------------------~~-----------------------~--~~~~~~~~~-~~~~~~~~~~~~~~~~~a~~~ 96 (296)
T PRK15430 64 ---------------------KT-----------------------L--IQTPQKIFM-LAVSAVLIGGNWLLFIWAVNN 96 (296)
T ss_pred ---------------------HH-----------------------H--HcCHHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 00 0 001122222 223334455678899999999
Q ss_pred cchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCCCcchhhhHHHHHHHH
Q 047775 162 TSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAM 241 (386)
Q Consensus 162 ~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~ 241 (386)
+++++++++.++.|+++.+++++++|||+++++++|++++++|++++..+++ +. ..+++++++
T Consensus 97 ~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~-------------~~----~~~~l~aa~ 159 (296)
T PRK15430 97 HHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG-------------SL----PIIALGLAF 159 (296)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC-------------Cc----cHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998864321 01 256888999
Q ss_pred HHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCCh-hHHHHHHHHHHHHHHHHHHH
Q 047775 242 SYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSA-KMEEVVLANGFVGSVLSDYF 320 (386)
Q Consensus 242 ~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~-~~~~~i~~~~i~~s~l~~~l 320 (386)
+||.|.+..||...+ +.........+...++.+.. .+....+. .....++ ..+..+.+.++ .+.+++.+
T Consensus 160 ~~a~~~i~~r~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~~~g~-~t~i~~~~ 229 (296)
T PRK15430 160 SFAFYGLVRKKIAVE--AQTGMLIETMWLLPVAAIYL----FAIADSST---SHMGQNPMSLNLLLIAAGI-VTTVPLLC 229 (296)
T ss_pred HHHHHHHHHHhcCCC--CchhHHHHHHHHHHHHHHHH----HHHccCCc---ccccCCcHHHHHHHHHHHH-HHHHHHHH
Confidence 999999999987532 21221111112222222211 11111001 1111122 22333444555 58899999
Q ss_pred HHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccchh
Q 047775 321 WALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRL 380 (386)
Q Consensus 321 ~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~ 380 (386)
|++++++.+|..+++..+++++++++++++++||++++.+++|+++|+.|+.+...+..+
T Consensus 230 ~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~~ 289 (296)
T PRK15430 230 FTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIY 289 (296)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999995559999999999999999999999999998777655433
No 8
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.95 E-value=1.4e-25 Score=207.42 Aligned_cols=209 Identities=20% Similarity=0.240 Sum_probs=164.8
Q ss_pred HHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccc
Q 047775 142 FYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQF 221 (386)
Q Consensus 142 ~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~ 221 (386)
+.+++.....+.+++.|++|+++++++++.++.|+++++++++++|||+++++++|++++++|+.++..+++
T Consensus 51 ~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~-------- 122 (260)
T TIGR00950 51 LLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGN-------- 122 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCc--------
Confidence 333444556788999999999999999999999999999999999999999999999999999999875431
Q ss_pred cccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChh
Q 047775 222 SAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAK 301 (386)
Q Consensus 222 ~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~ 301 (386)
.+....|++++++++++|+.+.++.||..++. ++.. .....+...++.+.+.|. ... .++ . .+.+..
T Consensus 123 ----~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~-~~~~-~~~~~~~~~~~~~~l~~~---~~~--~~~-~-~~~~~~ 189 (260)
T TIGR00950 123 ----LSINPAGLLLGLGSGISFALGTVLYKRLVKKE-GPEL-LQFTGWVLLLGALLLLPF---AWF--LGP-N-PQALSL 189 (260)
T ss_pred ----ccccHHHHHHHHHHHHHHHHHHHHHhHHhhcC-CchH-HHHHHHHHHHHHHHHHHH---HHh--cCC-C-CCcchH
Confidence 12346799999999999999999999987542 2211 112112222333333222 111 111 1 123456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHH
Q 047775 302 MEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGF 371 (386)
Q Consensus 302 ~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~ 371 (386)
.|..+++.+++++.+++.+|++++++.++..++...+++++++++++++++||+++..+++|+++++.|+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 190 QWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 7778899999999999999999999999999999999995559999999999999999999999999986
No 9
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.95 E-value=7.9e-25 Score=205.81 Aligned_cols=279 Identities=14% Similarity=0.073 Sum_probs=200.7
Q ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCcEEeeeecchhHHHHHHHHHHHHHHHHHhhhccccccchhhhhhccccc
Q 047775 5 YRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFLKDWFCNLLKRRSSKSVKDAETLNETSAA 84 (386)
Q Consensus 5 ~~~g~~~~l~~~~~w~~~~~~~~~~~~~~~~P~~~~~~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (386)
+.+|+++++++.++|+.++..+|+..++ .+|+.+...|.....+++..... +++.+..
T Consensus 10 ~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~--------~~~~~~~------------- 67 (293)
T PRK10532 10 VWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFK--------PWRLRFA------------- 67 (293)
T ss_pred cchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHh--------HHhccCC-------------
Confidence 3579999999999999999999999987 56888889998876654321111 1110000
Q ss_pred cCCCccccchhhhhhccccccCCcccCCCcccCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q 047775 85 LNSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAALARTSV 164 (386)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~ 164 (386)
++.++.....++ +....+.++++|++|+++
T Consensus 68 ----------------------------------------------~~~~~~~~~~g~----~~~~~~~~~~~al~~~~~ 97 (293)
T PRK10532 68 ----------------------------------------------KEQRLPLLFYGV----SLGGMNYLFYLSIQTVPL 97 (293)
T ss_pred ----------------------------------------------HHHHHHHHHHHH----HHHHHHHHHHHHHhcccH
Confidence 001233333333 334567889999999999
Q ss_pred hhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCCCcchhhhHHHHHHHHHHH
Q 047775 165 ASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYG 244 (386)
Q Consensus 165 ~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a 244 (386)
+.++++.++.|+++.+++ +||+.+ ..++.++++|+.++...+.. ..+....|++++++++++||
T Consensus 98 ~~a~~l~~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~~~~~~----------~~~~~~~G~ll~l~aa~~~a 161 (293)
T PRK10532 98 GIAVALEFTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLLPLGQD----------VSHVDLTGAALALGAGACWA 161 (293)
T ss_pred HHHHHHHHHHHHHHHHHh----cCChHH--HHHHHHHHHHHheeeecCCC----------cccCChHHHHHHHHHHHHHH
Confidence 999999999999999887 355554 45567889999988754321 11224579999999999999
Q ss_pred HHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 047775 245 LFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALC 324 (386)
Q Consensus 245 ~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i~~~~i~~s~l~~~l~~~~ 324 (386)
.|.+..||..+++ ++... .+..+++...+.|. ... .+. ..+.+...|..+++.|+++++++|.+|+++
T Consensus 162 ~~~v~~r~~~~~~-~~~~~----~~~~~~~~~~l~~~---~~~--~~~--~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~ 229 (293)
T PRK10532 162 IYILSGQRAGAEH-GPATV----AIGSLIAALIFVPI---GAL--QAG--EALWHWSILPLGLAVAILSTALPYSLEMIA 229 (293)
T ss_pred HHHHHHHHHhccC-CchHH----HHHHHHHHHHHHHH---HHH--ccC--cccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999987542 22221 12223333333322 111 111 122344556677899999999999999999
Q ss_pred HHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccchhhhc
Q 047775 325 VVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRLSKK 383 (386)
Q Consensus 325 ~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~~~~ 383 (386)
+++.+|..++++.+++|+++++++++++||+++..+++|+++|+.|.+...+..+++.|
T Consensus 230 ~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~~ 288 (293)
T PRK10532 230 LTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREPK 288 (293)
T ss_pred HHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999995559999999999999999999999999999888766554433
No 10
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.93 E-value=7.1e-24 Score=200.35 Aligned_cols=218 Identities=17% Similarity=0.232 Sum_probs=154.8
Q ss_pred HHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCCC
Q 047775 148 WFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGK 227 (386)
Q Consensus 148 ~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~ 227 (386)
....+.+.++|++|++++.++++.++.|+++.+++++++|||++++++.|++++++|+++....+ .+
T Consensus 75 ~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~-------------~~ 141 (302)
T TIGR00817 75 HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTE-------------LS 141 (302)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCc-------------cc
Confidence 34566788999999999999999999999999999999999999999999999999998754221 12
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc---e-ec--CCC-h
Q 047775 228 RSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPK---F-TI--PHS-A 300 (386)
Q Consensus 228 ~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~---~-~~--~~~-~ 300 (386)
....|++++++|+++||+|.++.||..++ ++.+......+...++.+.+.|...... +.+.. + .. ... .
T Consensus 142 ~~~~G~~~~l~a~~~~a~~~v~~k~~~~~--~~~~~~~~~~~~~~~~~~~l~p~~~~~~--~~~~~~~~~~~~~~~~~~~ 217 (302)
T TIGR00817 142 FNWAGFLSAMISNITFVSRNIFSKKAMTI--KSLDKTNLYAYISIMSLFLLSPPAFITE--GPPFLPHGFMQAISGVNVT 217 (302)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhcc--CCCCcccHHHHHHHHHHHHHHHHHHHHc--chHHHHHHHHHhhcccCch
Confidence 24569999999999999999999998752 1222223333333444444444322110 00000 0 00 001 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHH-HHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccch
Q 047775 301 KMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPL-AMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDR 379 (386)
Q Consensus 301 ~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~-a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~ 379 (386)
..+...+..++.+..+.+.+++.++++++|+.+++..+++ |+ +++++++++||+++..+++|+++++.|++++++.++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~-pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~ 296 (302)
T TIGR00817 218 KIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMK-RVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKA 296 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhh-hhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence 1122222233222233334566899999999999999999 65 999999999999999999999999999999987654
Q ss_pred hhhc
Q 047775 380 LSKK 383 (386)
Q Consensus 380 ~~~~ 383 (386)
+++|
T Consensus 297 ~~~~ 300 (302)
T TIGR00817 297 QKPK 300 (302)
T ss_pred cCcC
Confidence 4443
No 11
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.91 E-value=4.1e-22 Score=191.51 Aligned_cols=226 Identities=14% Similarity=0.209 Sum_probs=165.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCC
Q 047775 134 TREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKT 213 (386)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~ 213 (386)
+++++..+++... .+...+.|+++++++.++++.++.|+++++++++++|||++++++++++++++|+.+.+..+.
T Consensus 114 ~~~llp~gl~~~~----~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~ 189 (350)
T PTZ00343 114 LKNFLPQGLCHLF----VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL 189 (350)
T ss_pred HHHHHHHHHHHHH----HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc
Confidence 4555555555432 344456999999999999999999999999999999999999999999999999999885321
Q ss_pred CCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCC---cchHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 047775 214 WAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGE---KIDVQKLFGYIGLFTLVALWWLVWPLTALGI 290 (386)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 290 (386)
+....|++++++|++++|+|.++.||..++++. ..+......++.+++.+++.|..........
T Consensus 190 -------------~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~ 256 (350)
T PTZ00343 190 -------------HFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKW 256 (350)
T ss_pred -------------hhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 224679999999999999999999998764321 2333334443344555554444221110000
Q ss_pred CCce---ecCCChhHHHHHHHHHHHHHHHHHHHHHH----HHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHH
Q 047775 291 EPKF---TIPHSAKMEEVVLANGFVGSVLSDYFWAL----CVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILG 363 (386)
Q Consensus 291 e~~~---~~~~~~~~~~~i~~~~i~~s~l~~~l~~~----~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G 363 (386)
...+ ..+.+...+..+++. ++.+.+++++|+. ++++++|...++..++.++++++++++++||+++..+++|
T Consensus 257 ~~~~~~~~~~~~~~~~~~~l~~-i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG 335 (350)
T PTZ00343 257 VPVWTNYTANMTNYTKGIIIFK-IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLG 335 (350)
T ss_pred HHHHHHhhhcccccchHHHHHH-HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHH
Confidence 0000 001111123334454 4558999999995 9999999999999999944599999999999999999999
Q ss_pred HHHHHHHHHHHhcc
Q 047775 364 SAQVFAGFVIVNVS 377 (386)
Q Consensus 364 ~~lIi~g~~l~~~~ 377 (386)
+++++.|++++++-
T Consensus 336 ~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 336 MAVAILGALLYSLF 349 (350)
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999998763
No 12
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.91 E-value=6.1e-23 Score=191.96 Aligned_cols=212 Identities=13% Similarity=0.023 Sum_probs=157.3
Q ss_pred HHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccc
Q 047775 144 IAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSA 223 (386)
Q Consensus 144 ~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~ 223 (386)
.+......+.+++.|++++++++++.+.++.|+++.+++++++|||+++++++|+.+++.|++++..++..
T Consensus 69 ~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~--------- 139 (281)
T TIGR03340 69 SAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFA--------- 139 (281)
T ss_pred HHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccccc---------
Confidence 34445567788999999999999999999999999999999999999999999999999999988654321
Q ss_pred cCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHH
Q 047775 224 ANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKME 303 (386)
Q Consensus 224 ~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~ 303 (386)
.....|+.++++++++|+.|.+..|+..++.++.........+..+... .|........+.. ........+
T Consensus 140 ---~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~ 210 (281)
T TIGR03340 140 ---QHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMG---WPFLLLYLKRHGR---SMFPYARQI 210 (281)
T ss_pred ---ccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHH---HHHHHHHHHHhcc---chhhhHHHH
Confidence 1223588899999999999999988764321111111112211111110 1111111111111 111122345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHH
Q 047775 304 EVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVI 373 (386)
Q Consensus 304 ~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l 373 (386)
..+++.+.+++.++|.+|++++++.+++.++...+++++++++++++++||+++..+++|+++|+.|+++
T Consensus 211 ~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 211 LPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 5677888888999999999999999999999999999555999999999999999999999999999876
No 13
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.89 E-value=1.1e-20 Score=176.93 Aligned_cols=212 Identities=21% Similarity=0.274 Sum_probs=167.0
Q ss_pred HHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHH-HhccccchHHHHHHHHHhhhceEEEEecCCCCccccccc
Q 047775 144 IAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGA-FMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFS 222 (386)
Q Consensus 144 ~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~-~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~ 222 (386)
........+.+++.++++++++.++.+.++.|+++.++++ ++++||++++++.++++++.|++++..++..+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~----- 150 (292)
T COG0697 76 ALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGI----- 150 (292)
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchh-----
Confidence 3344556788999999999999999999999999999997 7779999999999999999999999987653210
Q ss_pred ccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhH
Q 047775 223 AANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKM 302 (386)
Q Consensus 223 ~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~ 302 (386)
. ...|+.+++.+++++|++.+..|+.. + .+....... +......... .+... .+ ...+.+...
T Consensus 151 ----~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~--~~~~~~~~~~----~~~~~--~~--~~~~~~~~~ 213 (292)
T COG0697 151 ----L-SLLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALL--LQLLLALLLL----LLFFL--SG--FGAPILSRA 213 (292)
T ss_pred ----H-HHHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHH--HHHHHHHHHH----HHHHh--cc--ccccCCHHH
Confidence 1 56899999999999999999999986 2 222222111 1111111110 11111 11 113455667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcc
Q 047775 303 EEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVS 377 (386)
Q Consensus 303 ~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~ 377 (386)
|..+.+.|++++.+++.+|++++++.++..++....++++++++++++++||.++..+++|+++++.|+.+.+++
T Consensus 214 ~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 214 WLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 888999999988899999999999999999999998884458889999999999999999999999999999876
No 14
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.89 E-value=1.6e-21 Score=179.91 Aligned_cols=253 Identities=8% Similarity=0.030 Sum_probs=170.1
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhcCCCcEEeeeecchhHHHHH-HHHHHHHHHHHHhhhccccccchhhhhhcccccc
Q 047775 7 AGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYL-PVAFLKDWFCNLLKRRSSKSVKDAETLNETSAAL 85 (386)
Q Consensus 7 ~g~~~~l~~~~~w~~~~~~~~~~~~~~~~P~~~~~~~~~~~~i~l-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (386)
+|++++++++++|+.+...+|.+ .+ .+|+.+++.|.....+++ +..... ++++..+.
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~-~~-~~~~~i~~~R~~~a~~~l~~~~~~~-------~~~~~~~~------------- 59 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL-KP-LPATDILGHRMIWSFPFMLLSVTLF-------RQWAALIE------------- 59 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh-cc-CCHHHHHHHHHHHHHHHHHHHHHHH-------cchHHHHH-------------
Confidence 48999999999999999999973 44 689999999988766554 322221 01000000
Q ss_pred CCCccccchhhhhhccccccCCcccCCCcccCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccchh
Q 047775 86 NSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAALARTSVA 165 (386)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~ 165 (386)
+.. +...++........+++....+.++++|+++++++
T Consensus 60 ---------------~~~---------------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~~~ 97 (256)
T TIGR00688 60 ---------------RLK---------------------------RIQKRPLILSLLLCGLLIGFNWWLFIWAVNNGSSL 97 (256)
T ss_pred ---------------HHh---------------------------CcccchHHHHHHHHHHHHHHHHHHHHHHHHcchHH
Confidence 000 00011212112223334556788999999999999
Q ss_pred hHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCCCcchhhhHHHHHHHHHHHH
Q 047775 166 STTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGL 245 (386)
Q Consensus 166 ~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~ 245 (386)
+++++.++.|+++.+++++++|||++++++++++++++|++++..+++ + .. .++++++++||.
T Consensus 98 ~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~-----------~--~~----~~~l~aa~~~a~ 160 (256)
T TIGR00688 98 EVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKG-----------S--LP----WEALVLAFSFTA 160 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcC-----------C--ch----HHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988754321 0 11 367889999999
Q ss_pred HHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 047775 246 FTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCV 325 (386)
Q Consensus 246 ~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~ 325 (386)
|.+..||..++ +.. ....+ .....+...+. ....+.+. .........|..+++.|++ +.++|.+|++++
T Consensus 161 ~~i~~~~~~~~--~~~--~~~~~--~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~ 229 (256)
T TIGR00688 161 YGLIRKALKNT--DLA--GFCLE--TLSLMPVAIYY---LLQTDFAT-VQQTNPFPIWLLLVLAGLI-TGTPLLAFVIAA 229 (256)
T ss_pred HHHHHhhcCCC--Ccc--hHHHH--HHHHHHHHHHH---HHHhccCc-ccccCchhHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 99999997542 111 11111 11111111111 11111211 1111122368888888876 899999999999
Q ss_pred HhhhhHHHHHHhhhhHHHHHHHHHHH
Q 047775 326 VWTTPLVATLGMSLTIPLAMVADMVI 351 (386)
Q Consensus 326 ~~~~~~~~s~~~~l~~p~a~i~~~i~ 351 (386)
++.+++.+++..+++|+++++++++.
T Consensus 230 ~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 230 NRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999944499988764
No 15
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.86 E-value=7e-22 Score=166.03 Aligned_cols=237 Identities=16% Similarity=0.294 Sum_probs=201.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEe
Q 047775 131 EPTTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTL 210 (386)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~ 210 (386)
..+.|..++....+.++|..+||.|..|++..++++++.++.+...|+++++++.+++|+...|++++++++.|++++.+
T Consensus 46 G~nik~~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay 125 (290)
T KOG4314|consen 46 GFNIKLFFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAY 125 (290)
T ss_pred CceeeeeeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEe
Confidence 45566666666667778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 047775 211 GKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGI 290 (386)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 290 (386)
.|+. ..+...|...++.+|...|+|.+..|+...+ ..-.+...++++.|.+.+.+.|.+...+.++|.
T Consensus 126 ~DN~-----------~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGn-An~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~V 193 (290)
T KOG4314|consen 126 ADNE-----------HADEIIGIACAVGSAFMAALYKVLFKMFIGN-ANFGDAAHFMSCLGFFNLCFISFPALILAFTGV 193 (290)
T ss_pred ccch-----------hhhhhhhHHHHHHHHHHHHHHHHHHHHHhcc-CcchhHHHHHHHHHHHHHHHHhhhHHHHHHhch
Confidence 8763 3457899999999999999999999999874 334566888889999999888877777888888
Q ss_pred CCceecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHH
Q 047775 291 EPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAG 370 (386)
Q Consensus 291 e~~~~~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g 370 (386)
|. ++. ....-|..+...+.. +..-..+.+.++..+.|...|+++...+|..+..|.++.+-.++.....|.++|++|
T Consensus 194 E~-~qs-FA~~PWG~l~G~A~L-~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~ 270 (290)
T KOG4314|consen 194 EH-LQS-FAAAPWGCLCGAAGL-SLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIG 270 (290)
T ss_pred HH-HHH-HhhCCchhhhhHHHH-HHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 85 431 112236667666655 444556778899999999999999999999999999998889999999999999999
Q ss_pred HHHHhccchhhh
Q 047775 371 FVIVNVSDRLSK 382 (386)
Q Consensus 371 ~~l~~~~~~~~~ 382 (386)
+++...++.|.+
T Consensus 271 FiLiiiP~d~~e 282 (290)
T KOG4314|consen 271 FILIIIPEDKDE 282 (290)
T ss_pred HHheecccchhh
Confidence 999988877654
No 16
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.85 E-value=2.3e-19 Score=168.09 Aligned_cols=220 Identities=14% Similarity=0.185 Sum_probs=167.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhc-ccHHHHHHHHHHhccccchHHH----HHHHHHhhhceEEEE
Q 047775 135 REIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSS-TSGLFTLFIGAFMGQDTLNVAK----VVAVLVSMAGVAMTT 209 (386)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~-~~p~~~~lls~~~~~ek~~~~~----~~~v~l~~~Gv~lv~ 209 (386)
++.+..+++.+.+|..+|++|+.++++++++.+..+.+ +.++++.+++.+++|||.++++ ++|++++++|++++.
T Consensus 56 ~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~ 135 (290)
T TIGR00776 56 LSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTS 135 (290)
T ss_pred cHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEE
Confidence 47777888889999999999999999999999999988 8899999999999999999999 999999999999998
Q ss_pred ecCCCCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHH--HHHHHHHHHHHHHHHHHHHHHHh
Q 047775 210 LGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQ--KLFGYIGLFTLVALWWLVWPLTA 287 (386)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~ 287 (386)
..++.+..++ ...+...|..++++|+++|+.|.+..|+.. .++.+.. +..+. .+.+.+.. + +.
T Consensus 136 ~~~~~~~~~~-----~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~~---~~~~~~~~~~~~g~-~~~~~~~~-~---~~-- 200 (290)
T TIGR00776 136 RSKDKSAGIK-----SEFNFKKGILLLLMSTIGYLVYVVVAKAFG---VDGLSVLLPQAIGM-VIGGIIFN-L---GH-- 200 (290)
T ss_pred eccccccccc-----cccchhhHHHHHHHHHHHHHHHHHHHHHcC---CCcceehhHHHHHH-HHHHHHHH-H---HH--
Confidence 7642211000 002236799999999999999999999863 2333221 22211 11222211 1 11
Q ss_pred hcCCCceecCCChhHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHhhhhHHH-HHHHHHHHcCCcchHHHH----
Q 047775 288 LGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVV-WTTPLVATLGMSLTIPL-AMVADMVIHGRHYSAIYI---- 361 (386)
Q Consensus 288 ~~~e~~~~~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~-~~~~~~~s~~~~l~~p~-a~i~~~i~~ge~~~~~~~---- 361 (386)
. .++++ .+...+..++ .|++ ..+++.+|..+.+ +.+++.+++...++ |+ +++++++++||..+..++
T Consensus 201 ~-~~~~~---~~~~~~~~~~-~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~-pvia~~~~v~~l~E~~~~~~~~~~~ 273 (290)
T TIGR00776 201 I-LAKPL---KKYAILLNIL-PGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLG-VIISTLGGILILGEKKTKREMIAIS 273 (290)
T ss_pred h-cccch---HHHHHHHHHH-HHHH-HHHHHHHHHHHcccccchhhHHHHHHHH-HHHHHHHHHHHhccCCCcceeehhH
Confidence 0 01101 1223344444 8888 7999999999999 99999999999999 66 999999999999999999
Q ss_pred HHHHHHHHHHHHHhc
Q 047775 362 LGSAQVFAGFVIVNV 376 (386)
Q Consensus 362 ~G~~lIi~g~~l~~~ 376 (386)
+|+++|+.|+.+...
T Consensus 274 iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 274 VGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999888654
No 17
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.82 E-value=4.1e-20 Score=162.33 Aligned_cols=216 Identities=14% Similarity=0.173 Sum_probs=168.3
Q ss_pred HHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCccccccccc-CCCc
Q 047775 150 VTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAA-NGKR 228 (386)
Q Consensus 150 ~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~-~~~~ 228 (386)
.+....|+|++|.+.+++++|..++|++|.+++|+++|||+++.+.++.++++.||++++.+.-.-.++.+.+++ ..+.
T Consensus 109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~ 188 (346)
T KOG4510|consen 109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEY 188 (346)
T ss_pred hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccc
Confidence 345566899999999999999999999999999999999999999999999999999999665322111111111 2234
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHHHH
Q 047775 229 SLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLA 308 (386)
Q Consensus 229 ~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i~~ 308 (386)
...|...++.+++.-|--.++.|+.-++.+..+++..+. +++++... +.....| .+++|..++.|+.++.
T Consensus 189 ~~~gt~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~----~i~lV~s~---I~~~~ig---~~~lP~cgkdr~l~~~ 258 (346)
T KOG4510|consen 189 DIPGTVAAISSVLFGASVYIILRYIGKNAHAIMSVSYFS----LITLVVSL---IGCASIG---AVQLPHCGKDRWLFVN 258 (346)
T ss_pred cCCchHHHHHhHhhhhhHHHHHHHhhccccEEEEehHHH----HHHHHHHH---HHHhhcc---ceecCccccceEEEEE
Confidence 456888888888888888888898866433333333332 22222211 1122222 2789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc
Q 047775 309 NGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNV 376 (386)
Q Consensus 309 ~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~ 376 (386)
+|++ +.+++.+...++|+-.+..+++..+..+.+|.+++++++||.|+++.+.|+++|+.+.+.+..
T Consensus 259 lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~ 325 (346)
T KOG4510|consen 259 LGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVAL 325 (346)
T ss_pred ehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHH
Confidence 9997 799999999999999999999999999777999999999999999999999999999877654
No 18
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.78 E-value=1.1e-16 Score=151.21 Aligned_cols=239 Identities=22% Similarity=0.302 Sum_probs=179.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 047775 133 TTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGK 212 (386)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~ 212 (386)
+.++....++ ++++++.+.+.|++|.+.+...++-++.|+++++++.+++|+|.++++++++++..+|+++....+
T Consensus 63 ~~~~~~~~~~----~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~ 138 (303)
T PF08449_consen 63 PLKKYAILSF----LFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSD 138 (303)
T ss_pred hHHHHHHHHH----HHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecc
Confidence 3556655543 455678888999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 047775 213 TWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEP 292 (386)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~ 292 (386)
...+..+ .........|+++.+++.++.|.+.++.+|..++++ .+....+.+...++.+..++....+......+
T Consensus 139 ~~~~~~~---~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~--~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~ 213 (303)
T PF08449_consen 139 SSSSSSS---NSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYG--KSPWELMFYTNLFSLPFLLILLFLLPTGEFRS 213 (303)
T ss_pred ccccccc---ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhC--CcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhH
Confidence 5432211 011222334999999999999999999999987543 23345555556666665544333211000110
Q ss_pred cee-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHH
Q 047775 293 KFT-IPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGF 371 (386)
Q Consensus 293 ~~~-~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~ 371 (386)
..+ ....+..+..++...+ ++.++..+.+..+++.+|...++...+..+++++++++++|+++++.+++|.++++.|.
T Consensus 214 ~~~f~~~~p~~~~~l~~~s~-~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~ 292 (303)
T PF08449_consen 214 AIRFISAHPSVLLYLLLFSL-TGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGI 292 (303)
T ss_pred HHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHH
Confidence 011 1122334555555655 47888888888999999999999999998889999999999999999999999999999
Q ss_pred HHHhccchhh
Q 047775 372 VIVNVSDRLS 381 (386)
Q Consensus 372 ~l~~~~~~~~ 381 (386)
.+.++.++|+
T Consensus 293 ~~~~~~~~k~ 302 (303)
T PF08449_consen 293 FLYSYAKKKK 302 (303)
T ss_pred HHHHHhhccC
Confidence 9998876654
No 19
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.74 E-value=1.1e-15 Score=133.89 Aligned_cols=218 Identities=15% Similarity=0.106 Sum_probs=159.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCC
Q 047775 134 TREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKT 213 (386)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~ 213 (386)
++.+..++.. ....|.+||.+++..+.+.+..+-.+-|+.+.+++. +| .+..+.+.+++.|+.++.-.+.
T Consensus 71 ~~~~~~yGvs----Lg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~s----Rr--~~d~vwvaLAvlGi~lL~p~~~ 140 (292)
T COG5006 71 RLALLAYGVS----LGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLSS----RR--LRDFVWVALAVLGIWLLLPLGQ 140 (292)
T ss_pred hHHHHHHHHH----HHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHhc----cc--hhhHHHHHHHHHHHHhheeccC
Confidence 3445555443 346899999999999999999999999999988763 33 3455667788888888775543
Q ss_pred CCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 047775 214 WAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPK 293 (386)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~ 293 (386)
. ..+....|..+++.++.||+.|.+..||..+.++..... .....+..++..|+ -....++
T Consensus 141 ~----------~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~----a~gm~vAaviv~Pi----g~~~ag~- 201 (292)
T COG5006 141 S----------VWSLDPVGVALALGAGACWALYIVLGQRAGRAEHGTAGV----AVGMLVAALIVLPI----GAAQAGP- 201 (292)
T ss_pred C----------cCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCCCchHH----HHHHHHHHHHHhhh----hhhhcch-
Confidence 2 223457899999999999999999999987432222222 22222333332332 2111111
Q ss_pred eecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHH
Q 047775 294 FTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVI 373 (386)
Q Consensus 294 ~~~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l 373 (386)
.+ .++.....-+..+++++.+.|.+=..++++.++..-++.+++|+.++++.+++++||.+|+.||+|.+.|+.+..-
T Consensus 202 -~l-~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG 279 (292)
T COG5006 202 -AL-FSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAG 279 (292)
T ss_pred -hh-cChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhc
Confidence 11 2345566677789999999999999999999999999999999444999999999999999999999999999887
Q ss_pred Hhccchhhh
Q 047775 374 VNVSDRLSK 382 (386)
Q Consensus 374 ~~~~~~~~~ 382 (386)
.....|++.
T Consensus 280 ~~lt~~~~~ 288 (292)
T COG5006 280 STLTARKPA 288 (292)
T ss_pred cccccCCCC
Confidence 666555543
No 20
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.70 E-value=7.8e-15 Score=131.94 Aligned_cols=205 Identities=16% Similarity=0.157 Sum_probs=154.6
Q ss_pred HHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCC
Q 047775 147 IWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANG 226 (386)
Q Consensus 147 ~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~ 226 (386)
+....-..|.+|.+...+-++++=++..|++..+++.+++|||+++.|+++++++.+||.......++
T Consensus 81 li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~------------ 148 (293)
T COG2962 81 LIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGS------------ 148 (293)
T ss_pred HHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCC------------
Confidence 34444558899999999999999999999999999999999999999999999999999887755321
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHH-HHhhcCCCceecCCChhHHHH
Q 047775 227 KRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWP-LTALGIEPKFTIPHSAKMEEV 305 (386)
Q Consensus 227 ~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~e~~~~~~~~~~~~~~ 305 (386)
-. ..++.=|++|++|..+-|+..- +...-+....+. +.|++.. +.+...++++....+...+..
T Consensus 149 -lp----wval~la~sf~~Ygl~RK~~~v------~a~~g~~lE~l~----l~p~al~yl~~l~~~~~~~~~~~~~~~~L 213 (293)
T COG2962 149 -LP----WVALALALSFGLYGLLRKKLKV------DALTGLTLETLL----LLPVALIYLLFLADSGQFLQQNANSLWLL 213 (293)
T ss_pred -Cc----HHHHHHHHHHHHHHHHHHhcCC------chHHhHHHHHHH----HhHHHHHHHHHHhcCchhhhcCCchHHHH
Confidence 11 2566678999999988777532 111112111111 1222221 122111111111134556788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccch
Q 047775 306 VLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDR 379 (386)
Q Consensus 306 i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~ 379 (386)
++..|++ |.++..++..+-++.+-...+...+.+|.+-.+++++++||+++..+++..++|-.|+.+...+.-
T Consensus 214 Lv~aG~v-TavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l 286 (293)
T COG2962 214 LVLAGLV-TAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGL 286 (293)
T ss_pred HHHhhHH-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888986 899999999999999999999999999444999999999999999999999999999999887653
No 21
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.61 E-value=1.6e-13 Score=124.77 Aligned_cols=223 Identities=19% Similarity=0.231 Sum_probs=160.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCC
Q 047775 134 TREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKT 213 (386)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~ 213 (386)
.|+.++.++... ++...|.+.+.++++.+++...++..+-.++|++++++++|+|++++||+++++-++|+.++...+.
T Consensus 14 ~~~~~~~~vPA~-lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~ 92 (244)
T PF04142_consen 14 PKDTLKLAVPAL-LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS 92 (244)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence 467777766544 7889999999999999999999999999999999999999999999999999999999999987665
Q ss_pred CCccccccc----ccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 047775 214 WAADESQFS----AANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALG 289 (386)
Q Consensus 214 ~~~~~~~~~----~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 289 (386)
...+.++.+ +....+...|.++.++++++.++..++.+|..|+.+ .+........++++.++..+. ....+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~--~s~~~~N~qL~~~gi~~~~~~---~~~~~ 167 (244)
T PF04142_consen 93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSN--VSLWIQNMQLYLFGILFNLLA---LLLSD 167 (244)
T ss_pred cccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccc--hhHHHHHHHHHHHHHHHHHHH---Hhccc
Confidence 432111110 112345678999999999999999999999998643 333333323334444332221 11111
Q ss_pred CCC----ceecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHH
Q 047775 290 IEP----KFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSA 365 (386)
Q Consensus 290 ~e~----~~~~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~ 365 (386)
.++ .+--.++...|..++..+ ++=.+....+|+.+...=+....+.+.++.+++++++|.+++....+|+.
T Consensus 168 ~~~~~~~g~f~G~~~~~~~~i~~~a-----~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~ 242 (244)
T PF04142_consen 168 GSAISESGFFHGYSWWVWIVIFLQA-----IGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAA 242 (244)
T ss_pred ccccccCCchhhcchHHHHHHHHHH-----HhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhhee
Confidence 111 010122333444444333 33344566788899888888888997889999999999999999999987
Q ss_pred HH
Q 047775 366 QV 367 (386)
Q Consensus 366 lI 367 (386)
+|
T Consensus 243 ~V 244 (244)
T PF04142_consen 243 LV 244 (244)
T ss_pred cC
Confidence 64
No 22
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.58 E-value=4.3e-13 Score=119.14 Aligned_cols=221 Identities=17% Similarity=0.176 Sum_probs=163.2
Q ss_pred HHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCCCcc
Q 047775 150 VTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRS 229 (386)
Q Consensus 150 ~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~ 229 (386)
.+..+.|.|+.+|+++.-.++-....+||.+++.-+++++++.++|+|+.....|++.+.+.|-....++ ....++.
T Consensus 98 ~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p---~~d~s~i 174 (372)
T KOG3912|consen 98 AGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDP---YTDYSSI 174 (372)
T ss_pred hhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCC---ccccccc
Confidence 3455668999999999999999999999999999999999999999999999999999987754321111 1134567
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCC--hhHHH---
Q 047775 230 LVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHS--AKMEE--- 304 (386)
Q Consensus 230 ~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~--~~~~~--- 304 (386)
..||++.+++-+.-|++.+..+|..++ ..+++....++.|+++++.+....+|+.+......+.-.+. ...|.
T Consensus 175 itGdllIiiaqiivaiQ~v~Eek~l~~--~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~ 252 (372)
T KOG3912|consen 175 ITGDLLIIIAQIIVAIQMVCEEKQLKK--SNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAF 252 (372)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhhh--ccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHH
Confidence 889999999999999999999998875 45777888999999998877666666666422211111000 01111
Q ss_pred ------HHHHHHHHHHHHHHHHHH----HHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH
Q 047775 305 ------VVLANGFVGSVLSDYFWA----LCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIV 374 (386)
Q Consensus 305 ------~i~~~~i~~s~l~~~l~~----~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~ 374 (386)
..++.+..+..++-.++| .--+..+++.-.+.-.+..-+--+++.....|.++..|+.|.++.+.|+.++
T Consensus 253 ~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY 332 (372)
T KOG3912|consen 253 AALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILY 332 (372)
T ss_pred HHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122223333333333333 2346677888888888885557778888889999999999999999999998
Q ss_pred h
Q 047775 375 N 375 (386)
Q Consensus 375 ~ 375 (386)
+
T Consensus 333 ~ 333 (372)
T KOG3912|consen 333 N 333 (372)
T ss_pred H
Confidence 6
No 23
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.57 E-value=2.4e-14 Score=133.25 Aligned_cols=228 Identities=19% Similarity=0.267 Sum_probs=177.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 047775 133 TTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGK 212 (386)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~ 212 (386)
.++.++..++..+ ++..+-+.++.+.+++....+-++.|+++.++++++.+|+.++..+..++....||.+-+..+
T Consensus 82 ~~~~llpl~~~~~----~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e 157 (316)
T KOG1441|consen 82 PLRTLLPLGLVFC----ISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTE 157 (316)
T ss_pred chHHHHHHHHHHH----HHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeecc
Confidence 4566666665554 456666799999999999999999999999999999999999999999999999999988754
Q ss_pred CCCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHH-HHHHHHHhhcCC
Q 047775 213 TWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALW-WLVWPLTALGIE 291 (386)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~e 291 (386)
. +.+..|.+.++++.+..+++.++.|+..++++...+....+.+.+.++...+. |...+ .|
T Consensus 158 ~-------------~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~-----~~ 219 (316)
T KOG1441|consen 158 L-------------SFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDY-----VE 219 (316)
T ss_pred c-------------cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhh-----hc
Confidence 2 34678999999999999999999999986445566767777777777777766 43222 22
Q ss_pred Cc-e---ec-CCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHH
Q 047775 292 PK-F---TI-PHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQ 366 (386)
Q Consensus 292 ~~-~---~~-~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~l 366 (386)
+. . .. +++.. ....+++. ++..+-+...+..+.+++|..-++...+---+.++.++++++++.++.+.+|+++
T Consensus 220 ~~~~~~~~~~~~~~~-~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~i 297 (316)
T KOG1441|consen 220 GNKFVGFLTAPWFVT-FLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAI 297 (316)
T ss_pred ccceeeeeccccchh-hHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHH
Confidence 10 1 11 33333 33344444 3456666777888999999999999988844588999999999999999999999
Q ss_pred HHHHHHHHhccchhhhcc
Q 047775 367 VFAGFVIVNVSDRLSKKL 384 (386)
Q Consensus 367 Ii~g~~l~~~~~~~~~~~ 384 (386)
-+.|++++++.+.++++.
T Consensus 298 ai~Gv~~Y~~~k~~~~~~ 315 (316)
T KOG1441|consen 298 AILGVFLYSRAKLKEKKG 315 (316)
T ss_pred HHHHHHHHHHHhhhhhcc
Confidence 999999998876655543
No 24
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.56 E-value=7.9e-12 Score=115.77 Aligned_cols=233 Identities=17% Similarity=0.191 Sum_probs=165.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCC
Q 047775 135 REIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTW 214 (386)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~ 214 (386)
++..+.++... +|.+.|.++|.++.+.++++..+...+-.+.|++++.+++++|++++||.++++.++|+.++-.+...
T Consensus 90 ~~~lk~~vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~ 168 (345)
T KOG2234|consen 90 RETLKVSVPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLS 168 (345)
T ss_pred HHHHHHHHHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCC
Confidence 46666665543 78888999999999999999999999999999999999999999999999999999999999843322
Q ss_pred CcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-
Q 047775 215 AADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPK- 293 (386)
Q Consensus 215 ~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~- 293 (386)
..++ .+....++...|....+.++...++..++.+|..++.+ .+.....-....++.++... .....++|..
T Consensus 169 ~~~a--~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~--~s~wi~NiqL~~~g~~f~~l---~~~~~d~~~i~ 241 (345)
T KOG2234|consen 169 PTGA--KSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSN--VSLWIRNIQLYFFGILFNLL---TILLQDGEAIN 241 (345)
T ss_pred CCCc--cCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHH---HHhhccccccc
Confidence 1111 11224567789999999999999999999999997533 33222211122233322111 1222233321
Q ss_pred ---eecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHH
Q 047775 294 ---FTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAG 370 (386)
Q Consensus 294 ---~~~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g 370 (386)
+-..++...|..++.+++.+-.+ ...+++.+-..=+...++.+.++.+.++.+++-++|....+|+.+|+.+
T Consensus 242 ~~gff~G~s~~vw~vVl~~a~gGLlv-----s~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~S 316 (345)
T KOG2234|consen 242 EYGFFYGYSSIVWLVVLLNAVGGLLV-----SLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILS 316 (345)
T ss_pred cCCccccccHHHHHHHHHHhccchhH-----HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHH
Confidence 11234555677666666543333 3456666666666666677677888889999999999999999999999
Q ss_pred HHHHhccchh
Q 047775 371 FVIVNVSDRL 380 (386)
Q Consensus 371 ~~l~~~~~~~ 380 (386)
+.++...+++
T Consensus 317 i~lY~~~P~~ 326 (345)
T KOG2234|consen 317 IFLYSLYPAR 326 (345)
T ss_pred HHHhhcCCcc
Confidence 9999865544
No 25
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.50 E-value=5.3e-15 Score=129.56 Aligned_cols=282 Identities=20% Similarity=0.266 Sum_probs=194.6
Q ss_pred hhhHHHHHHHHHHHHHHHhhHHHHHHHHhc-CCCcEEeeeecchhHH-HHHHHHHHHHHHHHHhhhccccccchhhhhhc
Q 047775 3 WRYRAGLFLISAVVIIWVTSAEVTQDIFSD-YKQPFAVTYLGASLMV-VYLPVAFLKDWFCNLLKRRSSKSVKDAETLNE 80 (386)
Q Consensus 3 ~~~~~g~~~~l~~~~~w~~~~~~~~~~~~~-~~~P~~~~~~~~~~~~-i~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (386)
||..+|+.+-=...++=++.++..+++... -+.|-+.+|++..... ++-|+... |++..+
T Consensus 14 kk~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~f--------R~~~~~---------- 75 (336)
T KOG2766|consen 14 KKTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLF--------RRKYIK---------- 75 (336)
T ss_pred hhhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHh--------hhHHHH----------
Confidence 555566665555555666667777777775 6889999999877644 45554332 111000
Q ss_pred cccccCCCccccchhhhhhccccccCCcccCCCcccCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 047775 81 TSAALNSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAALA 160 (386)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 160 (386)
..+++. +++++.-.-+|++...|.|
T Consensus 76 ---------------------------------------------------~~~~hY----illa~~DVEaNy~vV~AyQ 100 (336)
T KOG2766|consen 76 ---------------------------------------------------AKWRHY----ILLAFVDVEANYFVVKAYQ 100 (336)
T ss_pred ---------------------------------------------------HHHHHh----hheeEEeecccEEEeeehh
Confidence 012232 3333334456777778999
Q ss_pred ccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCCCcchhhhHHHHHHH
Q 047775 161 RTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSA 240 (386)
Q Consensus 161 ~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa 240 (386)
||+.+.+.++.+-....+.+++|+++|.|.++.|+.|+++|++|+++++..|....+. ...++..+||.+++++|
T Consensus 101 yTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~-----aggsnp~~GD~lvi~GA 175 (336)
T KOG2766|consen 101 YTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDR-----AGGSNPVKGDFLVIAGA 175 (336)
T ss_pred hcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccc-----cCCCCCccCcEEEEecc
Confidence 9999999999999999999999999999999999999999999999999887654332 24567789999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc--eecCCChhHHHHHHHHHHHHHHHHH
Q 047775 241 MSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPK--FTIPHSAKMEEVVLANGFVGSVLSD 318 (386)
Q Consensus 241 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~--~~~~~~~~~~~~i~~~~i~~s~l~~ 318 (386)
-+||+.++..+.+.++ .+...++++.|+++.++..+. .+ .|.. ..+.++......+. ...+..+-|
T Consensus 176 TlYaVSNv~EEflvkn----~d~~elm~~lgLfGaIIsaIQ----~i--~~~~~~~tl~w~~~i~~yl~--f~L~MFllY 243 (336)
T KOG2766|consen 176 TLYAVSNVSEEFLVKN----ADRVELMGFLGLFGAIISAIQ----FI--FERHHVSTLHWDSAIFLYLR--FALTMFLLY 243 (336)
T ss_pred eeeeeccccHHHHHhc----CcHHHHHHHHHHHHHHHHHHH----Hh--hhccceeeEeehHHHHHHHH--HHHHHHHHH
Confidence 9999999999988764 344667777788888764332 11 2221 12344433333322 222345555
Q ss_pred HHHHHHHHhhhhHHHHHHhhhhHHH-HHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcc
Q 047775 319 YFWALCVVWTTPLVATLGMSLTIPL-AMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVS 377 (386)
Q Consensus 319 ~l~~~~~~~~~~~~~s~~~~l~~p~-a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~ 377 (386)
.+.-..++..+++...+..... -+ +.+. ..+|-+.++...+..+.+..|++++..+
T Consensus 244 sl~pil~k~~~aT~~nlslLTs-Dmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~r 300 (336)
T KOG2766|consen 244 SLAPILIKTNSATMFNLSLLTS-DMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTR 300 (336)
T ss_pred HhhHHheecCCceEEEhhHhHH-HHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecc
Confidence 5656666777777766644444 55 6666 5567779999999999999999887543
No 26
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.26 E-value=3e-11 Score=104.96 Aligned_cols=216 Identities=18% Similarity=0.209 Sum_probs=162.6
Q ss_pred HHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCC
Q 047775 147 IWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANG 226 (386)
Q Consensus 147 ~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~ 226 (386)
.+.++...-+.|++|.+-.+..+--++-|+-++++++++.+++.+|+|..++++.++||++..++++..... ..
T Consensus 94 sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~------e~ 167 (337)
T KOG1580|consen 94 SYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGA------ED 167 (337)
T ss_pred HHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCC------cc
Confidence 455666777899999999999888999999999999999999999999999999999999999986432110 23
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcee----cCCChhH
Q 047775 227 KRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFT----IPHSAKM 302 (386)
Q Consensus 227 ~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~----~~~~~~~ 302 (386)
.....|.++.+++-..-++-...+.+..+.+ .+....+++ ...+.+.+.+-. .+.++| |- |+ ..-.+..
T Consensus 168 ~t~g~GElLL~lSL~mDGlTg~~Qdrira~y-q~~g~~MM~-~~NlwStL~Lg~---g~lfTG-El-weF~yF~~RhP~~ 240 (337)
T KOG1580|consen 168 KTFGFGELLLILSLAMDGLTGSIQDRIRASY-QRTGTSMMF-YTNLWSTLYLGA---GLLFTG-EL-WEFFYFVQRHPYV 240 (337)
T ss_pred cccchHHHHHHHHHHhcccchhHHHHHHHhh-ccCchhhHH-HHHHHHHHHhhh---hheehh-hH-HHHHHHHHhccHH
Confidence 4577899999999999999999888776542 222222222 223333322111 112221 21 21 1112346
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc
Q 047775 303 EEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNV 376 (386)
Q Consensus 303 ~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~ 376 (386)
|+-+...++ ++++++++.+.-+...+|...|+.....--++++.++++++++++.+||+|.++++.|...-..
T Consensus 241 ~~~l~l~ai-~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~ 313 (337)
T KOG1580|consen 241 FWDLTLLAI-ASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVV 313 (337)
T ss_pred HHHHHHHHH-HHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence 667777777 5899999999999999999999988888666999999999999999999999999999766543
No 27
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.25 E-value=9.5e-10 Score=99.42 Aligned_cols=226 Identities=19% Similarity=0.159 Sum_probs=146.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEec
Q 047775 132 PTTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLG 211 (386)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~ 211 (386)
.+|++.++-....++.-...--+-+++++|++.+..++.-+++++|+.+++.+|.-||++|.-..-+++..+|+++.+++
T Consensus 78 ~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~K 157 (349)
T KOG1443|consen 78 LSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYK 157 (349)
T ss_pred CcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEec
Confidence 34555554443333322223335579999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCC----CcchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 047775 212 KTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEG----EKIDVQKLFGYIGLFTLVALWWLVWPLTA 287 (386)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 287 (386)
+. +-...|.+++.+++++-++--.+.++..++++ .+.++...+. -.+. ..+.|. .+.+
T Consensus 158 sT-------------qf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~--p~M~-~~Ll~~--~l~f 219 (349)
T KOG1443|consen 158 ST-------------QFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQ--PWMS-IGLLPL--SLLF 219 (349)
T ss_pred cc-------------ceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhh--hHHH-HHHHHH--HHHH
Confidence 64 23567999999999988877777776665432 2232222111 1111 111121 1121
Q ss_pred hcCCC-----ceecCCChhHHHHHHHHHHHHHHHHHHHHH---HHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHH
Q 047775 288 LGIEP-----KFTIPHSAKMEEVVLANGFVGSVLSDYFWA---LCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAI 359 (386)
Q Consensus 288 ~~~e~-----~~~~~~~~~~~~~i~~~~i~~s~l~~~l~~---~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~ 359 (386)
-|.+. .+....+...+..+...+. ++.+++.+-. ..+.+++....++....--....+++.++.+++++..
T Consensus 220 EG~~~~~~s~~f~~~d~~~~~rv~g~i~l-~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~l 298 (349)
T KOG1443|consen 220 EGLHLITSSSIFRFQDTGLILRVIGLISL-GGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLL 298 (349)
T ss_pred cccccchhhhHHHhcCccHHHHHHHHHHH-HHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhh
Confidence 11111 1111112223434444433 2444444322 2345666667776655552338899999999999999
Q ss_pred HHHHHHHHHHHHHHHhc
Q 047775 360 YILGSAQVFAGFVIVNV 376 (386)
Q Consensus 360 ~~~G~~lIi~g~~l~~~ 376 (386)
.|+|..+...|+.+...
T Consensus 299 N~~Gl~i~~agi~~~~~ 315 (349)
T KOG1443|consen 299 NWLGLAICLAGILLHRN 315 (349)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999999999843
No 28
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.16 E-value=3.2e-10 Score=89.47 Aligned_cols=134 Identities=16% Similarity=0.156 Sum_probs=98.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecC--CChhHHHHHHHH
Q 047775 232 GDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIP--HSAKMEEVVLAN 309 (386)
Q Consensus 232 G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~--~~~~~~~~i~~~ 309 (386)
-.++++++|+++++-.++.|--.++-++...+. .-.. .....++. .....| +++.+ .+++.|..++..
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~-IRti---Vi~~~l~~---v~~~~g---~~~~~~~~~~k~~lflilS 73 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATT-IRTI---VILIFLLI---VLLVTG---NWQAGGEIGPKSWLFLILS 73 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCccHHHH-HHHH---HHHHHHHH---HHHhcC---ceecccccCcceehhhhHH
Confidence 357899999999999999998766322222211 1111 11111111 122222 24433 466789999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc
Q 047775 310 GFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNV 376 (386)
Q Consensus 310 ~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~ 376 (386)
|+ ++.++..+|+++++...+..+.....+.+.++++++++++||+++..+++|+++|.+|.+++.+
T Consensus 74 Gl-a~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 74 GL-AGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HH-HHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 96 6999999999999999999999999999555999999999999999999999999999887654
No 29
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.06 E-value=2.4e-07 Score=84.12 Aligned_cols=230 Identities=14% Similarity=0.138 Sum_probs=170.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 047775 133 TTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGK 212 (386)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~ 212 (386)
++++...+++.- .+...+.+.|++|.+=.+.++--++--+-+++.+.++.|+|.+..+-+..++.-.|+.+....+
T Consensus 82 pl~~y~~is~tn----~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~ 157 (327)
T KOG1581|consen 82 PLYKYSLISFTN----TLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFP 157 (327)
T ss_pred chhHHhHHHHHh----hcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEec
Confidence 345555444432 2466788999999999999999999999999999999999999999999999999999888765
Q ss_pred CCCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhc--C
Q 047775 213 TWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALG--I 290 (386)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~ 290 (386)
+.++.. .....+...|..+....-+.-+.-+..++++.++ ..++...++....++..+.-.. .+...| .
T Consensus 158 ~s~s~~----~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~--~k~s~~~mM~~vNLf~~i~~~~---~li~qg~~~ 228 (327)
T KOG1581|consen 158 NSDSSS----KSGRENSPIGILLLFGYLLFDGFTNATQDSLFKK--YKVSSLHMMFGVNLFSAILNGT---YLILQGHLL 228 (327)
T ss_pred CCCCcc----ccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhcc--CCccHhHHHHHHHHHHHHHHHH---hhhcCCCCc
Confidence 443111 1133567899999999999999999999999874 3444444444445555543110 111111 1
Q ss_pred CCcee-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHH
Q 047775 291 EPKFT-IPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFA 369 (386)
Q Consensus 291 e~~~~-~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~ 369 (386)
+. .. ....+..+.-++.... ++.+++.+.++-+++-||..-+.++...--++++++.+.+|++.+..|++|..+++.
T Consensus 229 ~a-v~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg 306 (327)
T KOG1581|consen 229 PA-VSFIKEHPDVAFDILLYST-CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFG 306 (327)
T ss_pred hH-HHHHHcChhHHHHHHHHHH-hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehH
Confidence 10 01 1223455666666665 478999999999999999999999999967799999999999999999999999999
Q ss_pred HHHHHhcc
Q 047775 370 GFVIVNVS 377 (386)
Q Consensus 370 g~~l~~~~ 377 (386)
|+.+-...
T Consensus 307 ~i~l~~~~ 314 (327)
T KOG1581|consen 307 GIFLEILL 314 (327)
T ss_pred HHHHHHHH
Confidence 98876543
No 30
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.06 E-value=2.2e-09 Score=87.18 Aligned_cols=125 Identities=20% Similarity=0.272 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHHHHHHHHHHHHHHHH
Q 047775 241 MSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYF 320 (386)
Q Consensus 241 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i~~~~i~~s~l~~~l 320 (386)
++||.+.+..|+..++ .+......+...++.+ +++. ....+.++ ....+.+.+...++.+++++.+++.+
T Consensus 1 ~~~a~~~~~~k~~~~~----~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK----ISPLSITFWRFLIAGI-LLIL---LLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLL 70 (126)
T ss_pred ceeeeHHHHHHHHhcc----CCHHHHHHHHHHHHHH-HHHH---HHhhcccc--ccCCChhhhhhhhHhhccceehHHHH
Confidence 4689999999998864 2222333332233332 1111 11111111 12344556777888888888999999
Q ss_pred HHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHh
Q 047775 321 WALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVN 375 (386)
Q Consensus 321 ~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~ 375 (386)
+++++++.++..++....++++++.++++++++|+++..+++|+++++.|+++..
T Consensus 71 ~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 71 YFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999955599999999999999999999999999998865
No 31
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.05 E-value=2e-09 Score=85.10 Aligned_cols=136 Identities=10% Similarity=0.104 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCcEEeeeecchhHHHHHHHHHHHHHHHHHhhhccccccchhhhhhccccccCC
Q 047775 8 GLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFLKDWFCNLLKRRSSKSVKDAETLNETSAALNS 87 (386)
Q Consensus 8 g~~~~l~~~~~w~~~~~~~~~~~~~~~~P~~~~~~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (386)
.+++.+++++.|+.....+|.-.++ .+|-+-+.+|+....+++...... ..+ .+..
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~-vdp~~At~IRtiVi~~~l~~v~~~-------~g~-~~~~--------------- 59 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEG-VDPDFATTIRTIVILIFLLIVLLV-------TGN-WQAG--------------- 59 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccc-cCccHHHHHHHHHHHHHHHHHHHh-------cCc-eecc---------------
Confidence 4578899999999988888766665 458889999987766654332221 111 1100
Q ss_pred CccccchhhhhhccccccCCcccCCCcccCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhH
Q 047775 88 PMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAALARTSVAST 167 (386)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 167 (386)
. +-.++++--+..-++.++ ...++||.|++..+++.+
T Consensus 60 ------~---------------------------------~~~~k~~lflilSGla~g----lswl~Yf~ALk~G~as~V 96 (140)
T COG2510 60 ------G---------------------------------EIGPKSWLFLILSGLAGG----LSWLLYFRALKKGKASRV 96 (140)
T ss_pred ------c---------------------------------ccCcceehhhhHHHHHHH----HHHHHHHHHHhcCCcceE
Confidence 0 001123444444454444 355789999999999999
Q ss_pred HHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEe
Q 047775 168 TVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTL 210 (386)
Q Consensus 168 ~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~ 210 (386)
.-+..++|+++.++|++++|||++..+++|+++..+|++++..
T Consensus 97 vPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 97 VPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred EEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 9999999999999999999999999999999999999999864
No 32
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.98 E-value=4.9e-08 Score=88.88 Aligned_cols=218 Identities=14% Similarity=0.155 Sum_probs=155.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhh-cccHHHHHHHHHHhccccchHHH----HHHHHHhhhceEEEE
Q 047775 135 REIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLS-STSGLFTLFIGAFMGQDTLNVAK----VVAVLVSMAGVAMTT 209 (386)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~lls~~~~~ek~~~~~----~~~v~l~~~Gv~lv~ 209 (386)
...+..+++.+++|...|..++.+.++..++++.-+. ...-+.+.++++++++|--+..+ .+|+++.++|+++.+
T Consensus 42 ~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts 121 (269)
T PF06800_consen 42 GTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTS 121 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence 3677788899999999999999999999999999997 46677799999999999876544 448899999999998
Q ss_pred ecCCCCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 047775 210 LGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALG 289 (386)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 289 (386)
..+..+...+ +..+...|....+++.+.|..|.++.|-.. .++.+.....+...+++.++ .....
T Consensus 122 ~~~~~~~~~~-----~~~~~~kgi~~Ll~stigy~~Y~~~~~~~~---~~~~~~~lPqaiGm~i~a~i-------~~~~~ 186 (269)
T PF06800_consen 122 YQDKKSDKSS-----SKSNMKKGILALLISTIGYWIYSVIPKAFH---VSGWSAFLPQAIGMLIGAFI-------FNLFS 186 (269)
T ss_pred cccccccccc-----cccchhhHHHHHHHHHHHHHHHHHHHHhcC---CChhHhHHHHHHHHHHHHHH-------Hhhcc
Confidence 8765433211 234566799999999999999999988643 23333322222212222221 11111
Q ss_pred CCCceecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHH----HHHHHH
Q 047775 290 IEPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAI----YILGSA 365 (386)
Q Consensus 290 ~e~~~~~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~----~~~G~~ 365 (386)
+. ...+...|.- +..|++ -.++..++..+.+..+.+.+-...-+.+.++.+.+.+++||+=+.. .++|.+
T Consensus 187 -~~---~~~~k~~~~n-il~G~~-w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~ 260 (269)
T PF06800_consen 187 -KK---PFFEKKSWKN-ILTGLI-WGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLI 260 (269)
T ss_pred -cc---cccccchHHh-hHHHHH-HHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHH
Confidence 11 1122333433 334543 5678888888999999998888888886669999999999987765 456888
Q ss_pred HHHHHHHH
Q 047775 366 QVFAGFVI 373 (386)
Q Consensus 366 lIi~g~~l 373 (386)
+|++|.++
T Consensus 261 Liv~G~il 268 (269)
T PF06800_consen 261 LIVIGAIL 268 (269)
T ss_pred HHHHhhhc
Confidence 88888654
No 33
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.98 E-value=2.7e-10 Score=92.58 Aligned_cols=62 Identities=15% Similarity=0.221 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEE
Q 047775 148 WFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTT 209 (386)
Q Consensus 148 ~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~ 209 (386)
...++.++++|+++++++.++.+.++.|+++.++++++++|++++++++|+++.++|++++.
T Consensus 64 ~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 64 TALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred eehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 45688899999999999999999999999999999999999999999999999999987653
No 34
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.96 E-value=2.8e-08 Score=84.02 Aligned_cols=144 Identities=18% Similarity=0.264 Sum_probs=106.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCC---CCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-eecC-----CChhH
Q 047775 232 GDLFGLLSAMSYGLFTVLLKKFCGEE---GEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPK-FTIP-----HSAKM 302 (386)
Q Consensus 232 G~~l~l~aa~~~a~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~-~~~~-----~~~~~ 302 (386)
|.+++++|.++.|++.++.|+..+++ ....+......+.+..+.+.+.|..+.......... .... .+...
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 67899999999999999999988752 244555666666667777666555333221110000 0011 13345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc
Q 047775 303 EEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNV 376 (386)
Q Consensus 303 ~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~ 376 (386)
+..++..|++ ..+.+...+..+++++|...++...+..++..+++++++||+++..+++|.++.+.|++++++
T Consensus 81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 6666767765 567777888899999999999999999888999999999999999999999999999988754
No 35
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.92 E-value=5.9e-07 Score=85.11 Aligned_cols=240 Identities=10% Similarity=0.041 Sum_probs=141.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhh-cccHHHHHHHHHHhccccc-------hHHHHHHHHHhhhceE
Q 047775 135 REIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLS-STSGLFTLFIGAFMGQDTL-------NVAKVVAVLVSMAGVA 206 (386)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~lls~~~~~ek~-------~~~~~~~v~l~~~Gv~ 206 (386)
...+..+++.+.+|...|..++.++++..++.+.-+. .+.-+...++..++++|=. ...-++|+++.++|++
T Consensus 70 ~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~ 149 (345)
T PRK13499 70 GSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVA 149 (345)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHH
Confidence 3566778888999999999999999999999998885 6888999999998887533 2347789999999999
Q ss_pred EEEecCCCCcccccccccCCCcchhhhHHHHHHHHHHHHHH-------HHHHHhcCCCCCcchHHHHHHHHHHHHHHHHH
Q 047775 207 MTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFT-------VLLKKFCGEEGEKIDVQKLFGYIGLFTLVALW 279 (386)
Q Consensus 207 lv~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~-------v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 279 (386)
+....+...+.+.+.++..+.+...|.++++++.+.++.|. ...+.......++...........+++..+.-
T Consensus 150 l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n 229 (345)
T PRK13499 150 IVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITN 229 (345)
T ss_pred HHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHH
Confidence 99883322111110000134566789999999999999999 43333211111111111111110111111110
Q ss_pred HHHHHHHhhcCCCcee----cCCChhHHHHH----HHHHHHHHHHHHHHHHHHHHhhhhHHHH----HHhhhhHHHHHHH
Q 047775 280 WLVWPLTALGIEPKFT----IPHSAKMEEVV----LANGFVGSVLSDYFWALCVVWTTPLVAT----LGMSLTIPLAMVA 347 (386)
Q Consensus 280 ~~~~~~~~~~~e~~~~----~~~~~~~~~~i----~~~~i~~s~l~~~l~~~~~~~~~~~~~s----~~~~l~~p~a~i~ 347 (386)
..........-++ +. ...+...+.-- +..|+. -.+++.++..+-.+.+..... +.+.+.+.++.+.
T Consensus 230 ~~~~~~~~~k~~~-~~~~~~~~~~~~~~~~n~l~~~l~G~~-W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistlw 307 (345)
T PRK13499 230 LGFCFIRLAKNKD-LSLKADFSLAKPLLITNVLLSALAGVM-WYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLW 307 (345)
T ss_pred HHHHHHHHhhCCC-cccchhccccchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHh
Confidence 0000000001111 11 11111111211 233332 456666777776666433222 2224453459999
Q ss_pred HHHHcCCcch------HHHHHHHHHHHHHHHHHhcc
Q 047775 348 DMVIHGRHYS------AIYILGSAQVFAGFVIVNVS 377 (386)
Q Consensus 348 ~~i~~ge~~~------~~~~~G~~lIi~g~~l~~~~ 377 (386)
+.+ ++|.=+ ...++|.+++++|..+....
T Consensus 308 Gi~-lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 308 GLV-LKEWKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred hhh-hhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 984 999866 67789999999998887654
No 36
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.88 E-value=2.9e-07 Score=84.57 Aligned_cols=223 Identities=15% Similarity=0.133 Sum_probs=154.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCC
Q 047775 134 TREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKT 213 (386)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~ 213 (386)
.|+++...++. +...++-..+++|.++...+++-+..|+++++....++|.|++...+.++....+|.......+.
T Consensus 77 ~kk~~P~~~lf----~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~ 152 (314)
T KOG1444|consen 77 AKKWFPVSLLF----VGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDL 152 (314)
T ss_pred HHHHccHHHHH----HHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccc
Confidence 45555555443 34455567899999999999999999999999999999999999999999999999888776653
Q ss_pred CCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-
Q 047775 214 WAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEP- 292 (386)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~- 292 (386)
. ....|..|++...++-+.+.+..||..+.. ...-...+.+-.++.++.+... .... .|.
T Consensus 153 s-------------f~~~gY~w~~~n~~~~a~~~v~~kk~vd~~--~l~~~~lv~yNnl~~L~~l~~~---~~~~-ge~~ 213 (314)
T KOG1444|consen 153 S-------------FNLRGYSWALANCLTTAAFVVYVKKSVDSA--NLNKFGLVFYNNLLSLPPLLIL---SFIT-GELD 213 (314)
T ss_pred e-------------ecchhHHHHHHHHHHHHHHHHHHHHhhccc--cccceeEEeehhHHHHHHHHHH---HHHh-cchH
Confidence 2 234589999999999999999999987632 1111111111122233221111 1111 110
Q ss_pred --ceec--CCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHH
Q 047775 293 --KFTI--PHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVF 368 (386)
Q Consensus 293 --~~~~--~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi 368 (386)
..+. -.+...+..+...++++-++.|.. .+..+..+++..++......-...+...+++++++++...+|..+=+
T Consensus 214 ~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s-~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~ 292 (314)
T KOG1444|consen 214 ALSLNFDNWSDSSVLVVMLLSCVMGFGISYTS-FLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGF 292 (314)
T ss_pred HHHhhcccccchhHHHHHHHHHHHHHHHHHHH-HHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHh
Confidence 0111 122345777787888765555544 55677888877777665553337777888889999999999999999
Q ss_pred HHHHHHhccchh
Q 047775 369 AGFVIVNVSDRL 380 (386)
Q Consensus 369 ~g~~l~~~~~~~ 380 (386)
.|-+++++...+
T Consensus 293 ~ggv~Y~~~~~~ 304 (314)
T KOG1444|consen 293 FGGVLYSYATFR 304 (314)
T ss_pred hhhhHHhhhhhh
Confidence 998888775533
No 37
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=98.83 E-value=2e-08 Score=89.65 Aligned_cols=233 Identities=18% Similarity=0.216 Sum_probs=142.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHH-HhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEE
Q 047775 131 EPTTREIATIGFYIAPIWFVTEYFSNAALARTSVASTT-VLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTT 209 (386)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~ 209 (386)
+.+.|+.++.. .++|..|.+.++|+++-=+--.- ++-+-+++-+++++++++|+|.+.+|..++++..+|+++-.
T Consensus 61 kiplk~Y~i~V----~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcT 136 (330)
T KOG1583|consen 61 KIPLKDYAITV----AMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICT 136 (330)
T ss_pred CCchhhhheeh----heeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEE
Confidence 34556665443 24566788889999985444444 44577899999999999999999999999999999999988
Q ss_pred ecCCCCccc--cc---cc-ccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHH-
Q 047775 210 LGKTWAADE--SQ---FS-AANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLV- 282 (386)
Q Consensus 210 ~~~~~~~~~--~~---~~-~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~- 282 (386)
+..+.+... ++ .+ .+....+..|..+...+-+..|.-.++++...+++++. +...+.+.-...++......
T Consensus 137 l~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh--~~EalFytH~LsLP~Flf~~~ 214 (330)
T KOG1583|consen 137 LFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKH--WKEALFYTHFLSLPLFLFMGD 214 (330)
T ss_pred eecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--hHHHHHHHHHhccchHHHhcc
Confidence 654322111 00 00 01222345787776666666666655555444433322 22333333444444321110
Q ss_pred -HHHH---hhcCCCceecCC----ChhHHHHHHHHHHHHHHHHHHHHHHHHHh----hhhHHHHHHhhhhHHHHHHHHHH
Q 047775 283 -WPLT---ALGIEPKFTIPH----SAKMEEVVLANGFVGSVLSDYFWALCVVW----TTPLVATLGMSLTIPLAMVADMV 350 (386)
Q Consensus 283 -~~~~---~~~~e~~~~~~~----~~~~~~~i~~~~i~~s~l~~~l~~~~~~~----~~~~~~s~~~~l~~p~a~i~~~i 350 (386)
+.-+ ....|+ ...|. -+..|..++. +++.++.-.+++-. +++..+++...+.--++.+++.+
T Consensus 215 div~~~~~~~~se~-~~~p~~g~~vP~~~~yLl~-----n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~Sii 288 (330)
T KOG1583|consen 215 DIVSHWRLAFKSES-YLIPLLGFKVPSMWVYLLF-----NVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSII 288 (330)
T ss_pred hHHHHHHHHhcCcc-eeccccCccccHHHHHHHH-----HHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheee
Confidence 0001 111221 22222 1234544443 44555554555443 44556666667775669999999
Q ss_pred HcCCcchHHHHHHHHHHHHHHHHHh
Q 047775 351 IHGRHYSAIYILGSAQVFAGFVIVN 375 (386)
Q Consensus 351 ~~ge~~~~~~~~G~~lIi~g~~l~~ 375 (386)
.+.+++++..|+|+.+++.|.++..
T Consensus 289 yF~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 289 YFENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred EecCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987764
No 38
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.78 E-value=1.7e-08 Score=81.02 Aligned_cols=63 Identities=21% Similarity=0.247 Sum_probs=58.9
Q ss_pred HHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCC
Q 047775 150 VTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKT 213 (386)
Q Consensus 150 ~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~ 213 (386)
.++.++++|+++.+ +.++.+.+++|+++.+++++++|||++++++++++++++|++++..++.
T Consensus 47 ~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 47 VAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred HHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 57789999999999 5888999999999999999999999999999999999999999988764
No 39
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.73 E-value=1.5e-07 Score=88.28 Aligned_cols=233 Identities=14% Similarity=0.136 Sum_probs=133.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCC
Q 047775 136 EIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWA 215 (386)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~ 215 (386)
..++.|+. .+.+++.+.+.|+.+.|++..+-+.+..-++..+++..++|||++++.+.|+.+++.|..+++..+..+
T Consensus 51 ~~W~~G~~---~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~ 127 (300)
T PF05653_consen 51 PLWWIGLL---LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKE 127 (300)
T ss_pred HHHHHHHH---HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCC
Confidence 44555544 334577788999999999999999999999999999999999999999999999999998887655432
Q ss_pred cccccccc--c--CCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCC-cchHHHHHHHHHHHHHHHHHHHH-HHHHhhc
Q 047775 216 ADESQFSA--A--NGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGE-KIDVQKLFGYIGLFTLVALWWLV-WPLTALG 289 (386)
Q Consensus 216 ~~~~~~~~--~--~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~ 289 (386)
.+..+.++ . ....+.. .. .+...+...+.....+|..+++.- .......+ |.++.+..=-.. .....
T Consensus 128 ~~~~t~~~l~~~~~~~~fl~-y~-~~~~~~~~~L~~~~~~r~g~~~i~vyi~i~sl~---Gs~tvl~~K~i~~~i~~~-- 200 (300)
T PF05653_consen 128 EPIHTLDELIALLSQPGFLV-YF-ILVLVLILILIFFIKPRYGRRNILVYISICSLI---GSFTVLSAKAISILIKLT-- 200 (300)
T ss_pred CCcCCHHHHHHHhcCcceeh-hH-HHHHHHHHHHHHhhcchhcccceEEEEEEeccc---cchhhhHHHHHHHHHHHH--
Confidence 22111100 0 0111111 11 111112222222222232221100 00011111 111111100000 00111
Q ss_pred CCCceecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHH-HHHHHHHHcCCcc--hH----HHHH
Q 047775 290 IEPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPL-AMVADMVIHGRHY--SA----IYIL 362 (386)
Q Consensus 290 ~e~~~~~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~-a~i~~~i~~ge~~--~~----~~~~ 362 (386)
.+++.++ ..+..|..++.. +.+.+.-..+.|+++++.+++.+....+..--. +++-+.++++|.- +. ....
T Consensus 201 ~~g~~~f-~~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~ 278 (300)
T PF05653_consen 201 FSGDNQF-TYPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLC 278 (300)
T ss_pred hcCchhh-hhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHH
Confidence 1111122 223445444433 334566667788999999988777666655455 8888899999753 44 5567
Q ss_pred HHHHHHHHHHHHhccchh
Q 047775 363 GSAQVFAGFVIVNVSDRL 380 (386)
Q Consensus 363 G~~lIi~g~~l~~~~~~~ 380 (386)
|+.+++.|+++.+..+..
T Consensus 279 G~~~ii~GV~lL~~~~~~ 296 (300)
T PF05653_consen 279 GFLIIIIGVFLLSSSKDK 296 (300)
T ss_pred HHHHHHHhhheeeccCch
Confidence 899999999998765443
No 40
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.69 E-value=9.3e-09 Score=91.63 Aligned_cols=212 Identities=17% Similarity=0.197 Sum_probs=146.2
Q ss_pred HHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCCCcchhhhH
Q 047775 155 SNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDL 234 (386)
Q Consensus 155 ~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~G~~ 234 (386)
-++.++|.+++-.-+=-++.-+|+.+++++++|+|-+..-..++.+.+.|-.+=+-.++. ...-...|.+
T Consensus 119 nnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~----------~~~ls~~Gvi 188 (347)
T KOG1442|consen 119 NNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGS----------TGTLSWIGVI 188 (347)
T ss_pred cceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccc----------cCccchhhhH
Confidence 368899999998888888999999999999999999998888888877776553322211 2345678999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecC--CChhHHHHHHHHHHH
Q 047775 235 FGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIP--HSAKMEEVVLANGFV 312 (386)
Q Consensus 235 l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~--~~~~~~~~i~~~~i~ 312 (386)
+++.|+++-|+..+..||.....++ ....+..+..+.+.++..|......- .+..+..| +...+|..+...|++
T Consensus 189 fGVlaSl~vAlnaiytkk~l~~v~~--~iw~lt~ynnv~a~lLflpll~lnge--~~~v~~~~~l~a~~Fw~~mtLsglf 264 (347)
T KOG1442|consen 189 FGVLASLAVALNAIYTKKVLPPVGD--CIWRLTAYNNVNALLLFLPLLILNGE--FQAVVGFPHLPAIKFWILMTLSGLF 264 (347)
T ss_pred HHHHHHHHHHHHHHhhheecccccC--eehhhHHHHHHHHHHHHHHHHHHcch--HHHHcCcccchHHHHHHHHHHHHHH
Confidence 9999999999999999987643222 22444445556666655554222211 11112222 244567777777777
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccchhh
Q 047775 313 GSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRLS 381 (386)
Q Consensus 313 ~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~~ 381 (386)
+-.++|.- .+=++-++|..-.+..+-..-.-.++++.+++|.-+..-|-|-.+|+.|-..+.+.++++
T Consensus 265 gF~mgyvT-g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~e 332 (347)
T KOG1442|consen 265 GFAMGYVT-GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHE 332 (347)
T ss_pred HHHhhhee-eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHH
Confidence 55554332 223566778766665554433357888999999999999999999999988887654433
No 41
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.66 E-value=2.6e-07 Score=85.15 Aligned_cols=58 Identities=17% Similarity=0.310 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhce
Q 047775 148 WFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGV 205 (386)
Q Consensus 148 ~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv 205 (386)
..+++.+|++++++.+++.++.+.++.|+++.++++++++|+++..+++|+.+.+.|+
T Consensus 202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 4467889999999999999999999999999999999999999999999999999986
No 42
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.64 E-value=1.4e-06 Score=81.46 Aligned_cols=134 Identities=13% Similarity=-0.010 Sum_probs=91.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHHHHHHHH
Q 047775 233 DLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFV 312 (386)
Q Consensus 233 ~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i~~~~i~ 312 (386)
..+.+++++++|...+..||..+++ .. ..+.. .....+.+.|.. .....+..+.. .+...|..++ .+..
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~-~~---~~~~~--~~~~~~~l~~~~---~~~~~~~~~~~-~~~~~~~~~~-~~~~ 71 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKE-PD---FLWWA--LLAHSVLLTPYG---LWYLAQVGWSR-LPATFWLLLA-ISAV 71 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCch-hH---HHHHH--HHHHHHHHHHHH---HHhcccCCCCC-cchhhHHHHH-HHHH
Confidence 4678999999999999999877642 11 11111 122333333321 11101111221 2223343344 4444
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcc
Q 047775 313 GSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVS 377 (386)
Q Consensus 313 ~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~ 377 (386)
+....+.++++++++.++..+++..+..++++++++++++||+++..+++|.++++.|+++...+
T Consensus 72 ~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~ 136 (281)
T TIGR03340 72 ANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS 136 (281)
T ss_pred HHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 67888999999999999999999999994449999999999999999999999999999887653
No 43
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.60 E-value=3.8e-07 Score=74.48 Aligned_cols=123 Identities=21% Similarity=0.179 Sum_probs=89.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHHHHHH
Q 047775 231 VGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANG 310 (386)
Q Consensus 231 ~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i~~~~ 310 (386)
.|.++.+.+.++-+...++.|+-.++.++ .+.... .. ... ... . ++ ...++.|
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~----~~-~~~--------~~~--~--------~p---~~~i~lg 54 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD----FI-AAL--------LAF--G--------LA---LRAVLLG 54 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH----HH-HHH--------HHH--h--------cc---HHHHHHH
Confidence 36788888988889999999987654221 211110 00 000 000 0 11 1256778
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHH--HcCCcchHHHHHHHHHHHHHHHHHhccchh
Q 047775 311 FVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMV--IHGRHYSAIYILGSAQVFAGFVIVNVSDRL 380 (386)
Q Consensus 311 i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i--~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~ 380 (386)
+++.++++.+|.+++++.+...+....++...+..+.++. ++||++|+.+++|.++|++|++++++++++
T Consensus 55 l~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~ 126 (129)
T PRK02971 55 LAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTK 126 (129)
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence 8889999999999999999999998888884446667764 899999999999999999999999876654
No 44
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.58 E-value=1.7e-06 Score=77.35 Aligned_cols=227 Identities=14% Similarity=0.164 Sum_probs=156.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEec
Q 047775 132 PTTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLG 211 (386)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~ 211 (386)
.++|...+++++..- ..-+-+-++.|.+-....+.-++--+-+++-+.++-+.|..+....+..+-.+|.++....
T Consensus 104 iP~rtY~~la~~t~g----tmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLA 179 (367)
T KOG1582|consen 104 IPWRTYVILAFLTVG----TMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLA 179 (367)
T ss_pred cchhHhhhhHhhhhh----ccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhc
Confidence 356666666654332 2333457788888888777778888888899999999999999999999999999999988
Q ss_pred CCCCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 047775 212 KTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIE 291 (386)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e 291 (386)
|+.. +++.+..|.++.-.|-++-|+-.-+++|..+.++.+. ..+..+...++++.+.. ++..+| |
T Consensus 180 Ds~~---------sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss--~EmvfySy~iG~vflf~---~mvlTg-e 244 (367)
T KOG1582|consen 180 DSQT---------SPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASS--SEMVFYSYGIGFVFLFA---PMVLTG-E 244 (367)
T ss_pred cccc---------CCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCc--ceEEEeeecccHHHHHH---HHHhcc-c
Confidence 7643 3445678999988888889988888888776533322 12222222233333221 122222 1
Q ss_pred C--cee--cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHH
Q 047775 292 P--KFT--IPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQV 367 (386)
Q Consensus 292 ~--~~~--~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lI 367 (386)
- .|. ..++.+.....+..+. .+.++...-...++..++..+.......--++++++++++..++|....-|..+|
T Consensus 245 ~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv 323 (367)
T KOG1582|consen 245 LFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLV 323 (367)
T ss_pred chhhhHHHHhCcHhHHHHHHHHHH-HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHH
Confidence 0 011 1223334444443433 3555666666678888888888888888788999999999999999999999999
Q ss_pred HHHHHHHhccc
Q 047775 368 FAGFVIVNVSD 378 (386)
Q Consensus 368 i~g~~l~~~~~ 378 (386)
+.|+++-.+++
T Consensus 324 ~lgI~Ln~ysk 334 (367)
T KOG1582|consen 324 VLGIYLNMYSK 334 (367)
T ss_pred HHHHHhhcccC
Confidence 99999876654
No 45
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.57 E-value=2e-06 Score=77.47 Aligned_cols=185 Identities=17% Similarity=0.095 Sum_probs=104.1
Q ss_pred ccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHH
Q 047775 173 TSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKK 252 (386)
Q Consensus 173 ~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~ 252 (386)
..-+.+.++.+...+.+.+..++.+......|+.....++..+.. ...++...|....+.++.+-+.-.++.++
T Consensus 33 ~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~------~~~g~~~~g~~~~l~a~~~~~~~~~y~e~ 106 (222)
T TIGR00803 33 LKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKT------LMFGNPVVGLSAVLSALLSSGFAGVYFEK 106 (222)
T ss_pred HHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccc------cccccHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 333444444444445555555555555445555444333221100 01234567777778888887888888888
Q ss_pred hcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc--ee--cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 047775 253 FCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPK--FT--IPHSAKMEEVVLANGFVGSVLSDYFWALCVVWT 328 (386)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~--~~--~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~ 328 (386)
..+++ +.. .........+++.+..... ....+.+.. +. ...+...|..+ +.+.++..+..+.+++.
T Consensus 107 ~~k~~-~~~-~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~a~~~~~v~~vlk~~ 176 (222)
T TIGR00803 107 ILKDG-DTM-FWSRNLQLPLFGLFSTFSV---LLWSDGTLISNFGFFIGYPTAVWIVG-----LLNVGGGLCIGGVVRYA 176 (222)
T ss_pred cccCC-CCc-hHHHHHHHHHHHHHHHHHH---HhhcccchhhccCcccCCchHHHHHH-----HHHHhcCceeeehhHHh
Confidence 65532 211 1111111122222211110 111111110 00 11222223222 23555666788899999
Q ss_pred hhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHH
Q 047775 329 TPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVI 373 (386)
Q Consensus 329 ~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l 373 (386)
++...+....+++.++.+++++++||+++..+++|+.+++.|+++
T Consensus 177 ~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 177 DNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 999999999999556999999999999999999999999998754
No 46
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.50 E-value=7e-07 Score=86.04 Aligned_cols=64 Identities=16% Similarity=0.196 Sum_probs=59.4
Q ss_pred HHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCC
Q 047775 150 VTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKT 213 (386)
Q Consensus 150 ~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~ 213 (386)
++..+|++++++.+++.+++..++.|+++.++++++++|++++.+++|.++.+.|++++.....
T Consensus 268 lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~ 331 (358)
T PLN00411 268 VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKA 331 (358)
T ss_pred HHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhh
Confidence 4677999999999999999999999999999999999999999999999999999999875443
No 47
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.45 E-value=6.4e-06 Score=77.64 Aligned_cols=138 Identities=15% Similarity=0.163 Sum_probs=94.3
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceec-CCChhHHHHH
Q 047775 228 RSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTI-PHSAKMEEVV 306 (386)
Q Consensus 228 ~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~-~~~~~~~~~i 306 (386)
+...|.++.++++++|+...+..|.. .+ .+......+-..++.+++.+. ....+....... ..+.+.+..
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~----~~~~~~~~~R~~~a~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~- 75 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-YY----VPADEILTHRVIWSFFFMVVL---MSICRQWSYLKTLIQTPQKIFM- 75 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-cC----CCHHHHHHHHHHHHHHHHHHH---HHHHccHHHHHHHHcCHHHHHH-
Confidence 45679999999999999999999764 21 333344333333444332222 111110000000 012233322
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHH-HHHHHHHHcCCcchHHHHHHHHHHHHHHHHHh
Q 047775 307 LANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPL-AMVADMVIHGRHYSAIYILGSAQVFAGFVIVN 375 (386)
Q Consensus 307 ~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~-a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~ 375 (386)
...+.++..+.+.+++++++++++..+++..+.. |+ .+++++++++|+++..+++|.++.+.|+++..
T Consensus 76 ~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~-Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 76 LAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFIN-PLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHH-HHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 3345556778899999999999999999999988 66 99999999999999999999999999988765
No 48
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.39 E-value=4.2e-06 Score=76.90 Aligned_cols=228 Identities=13% Similarity=0.125 Sum_probs=132.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCC
Q 047775 136 EIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWA 215 (386)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~ 215 (386)
++++.|++ .+.+.+...|.|..|.|++..+.+.+++.+..++++..+++||+++...+|+.++++|-.+++.+...+
T Consensus 65 ~~Ww~G~l---tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e 141 (335)
T KOG2922|consen 65 PLWWAGML---TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKE 141 (335)
T ss_pred HHHHHHHH---HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcc
Confidence 45555554 344677788999999999999999999999999999999999999999999999999998888766543
Q ss_pred cccccccc--c--CCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHH---HHHHHHHHHH--HHHHHHHHH
Q 047775 216 ADESQFSA--A--NGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLF---GYIGLFTLVA--LWWLVWPLT 286 (386)
Q Consensus 216 ~~~~~~~~--~--~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~---~~~~~~~~~~--l~~~~~~~~ 286 (386)
.+-.+... . ....+..-..+.++ . ..+-....|+ +++. .++.... +..|-++... .+-.++-..
T Consensus 142 ~~i~t~~el~~~~~~~~Fliy~~~iil-~--~~il~~~~~p---~~g~-tnilvyi~i~s~iGS~tV~svKalg~aiklt 214 (335)
T KOG2922|consen 142 QEIESVEEVWELATEPGFLVYVIIIIL-I--VLILIFFYAP---RYGQ-TNILVYIGICSLIGSLTVMSVKALGIAIKLT 214 (335)
T ss_pred cccccHHHHHHHhcCccHHHHHHHHHH-H--HHHHheeecc---cccc-cceeehhhHhhhhcceeeeeHHHHHHHHHHH
Confidence 22111000 0 11111111111111 1 1111111121 1111 1111111 1222111110 000011122
Q ss_pred hhcCCCceecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHH-HHHHHHHHcCCcch------HH
Q 047775 287 ALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPL-AMVADMVIHGRHYS------AI 359 (386)
Q Consensus 287 ~~~~e~~~~~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~-a~i~~~i~~ge~~~------~~ 359 (386)
+.| ..+... +..|..++..+. +...-....+++++..++..++...+..--. +++.+.+++.|.-. ..
T Consensus 215 ~~g---~~ql~~-~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~ 289 (335)
T KOG2922|consen 215 FSG---NNQLFY-PLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAG 289 (335)
T ss_pred hcC---Cccccc-HHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHH
Confidence 222 122222 244555444433 3455555678999999988877777755444 88888888887432 26
Q ss_pred HHHHHHHHHHHHHHHhccc
Q 047775 360 YILGSAQVFAGFVIVNVSD 378 (386)
Q Consensus 360 ~~~G~~lIi~g~~l~~~~~ 378 (386)
...|+..++.|+.++...+
T Consensus 290 ~~~Gf~ti~~G~flL~~~k 308 (335)
T KOG2922|consen 290 ELCGFVTIFLGIFLLHRTK 308 (335)
T ss_pred HHHhHHHhhheeeEeeeec
Confidence 6789999999998886543
No 49
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=98.39 E-value=2.5e-06 Score=74.16 Aligned_cols=228 Identities=16% Similarity=0.176 Sum_probs=154.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCC
Q 047775 134 TREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKT 213 (386)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~ 213 (386)
.|+++..+++.... -+.-..+++|.++...++.-++..+.++.....+++.|++-....+-++.+..-+.-..+|.
T Consensus 68 aK~WfpiSfLLv~M----Iyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~ 143 (309)
T COG5070 68 AKKWFPISFLLVVM----IYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQ 143 (309)
T ss_pred hhhhcCHHHHHHHH----HHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchh
Confidence 46777777665543 23446899999999999999999999999999999999999888887776665444443332
Q ss_pred CCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 047775 214 WAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPK 293 (386)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~ 293 (386)
.... -......-|.+|+...++.-|.|....||..+-. ..-+ .-.+.+-.++++++++.. -+. +|.
T Consensus 144 q~~~------~~~~~lN~GY~Wm~~NclssaafVL~mrkri~lt-Nf~d-~dtmfYnNllslPiL~~~--s~~---~ed- 209 (309)
T COG5070 144 QASA------FKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLT-NFKD-FDTMFYNNLLSLPILLSF--SFL---FED- 209 (309)
T ss_pred hHHH------HHhcccCCceEEEehhhHhHHHHHHHHHHhhccc-ccch-hhHHHHhhhHHHHHHHHH--HHH---hcc-
Confidence 1100 0223455699999999999999999999876521 1111 223334456666654322 111 332
Q ss_pred ee---cC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHH
Q 047775 294 FT---IP--HSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVF 368 (386)
Q Consensus 294 ~~---~~--~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi 368 (386)
|. +. ........+...|+. ++.--++-.|.++-++.+.-++...+.--..++.+.++++|+.+...+....+=.
T Consensus 210 ws~~n~annl~~d~l~am~ISgl~-svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGf 288 (309)
T COG5070 210 WSPGNLANNLSVDSLMAMFISGLC-SVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGF 288 (309)
T ss_pred CCcchhhcCCChHHHHHHHHHHHH-HhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHH
Confidence 21 11 112234456666764 5555567788899999999888888884447788999999999999999888777
Q ss_pred HHHHHHhccchh
Q 047775 369 AGFVIVNVSDRL 380 (386)
Q Consensus 369 ~g~~l~~~~~~~ 380 (386)
.+-+++.....+
T Consensus 289 lsg~iYavaks~ 300 (309)
T COG5070 289 LSGAIYAVAKSK 300 (309)
T ss_pred HHHHHHHHHHHH
Confidence 776666554433
No 50
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.37 E-value=3.7e-06 Score=79.10 Aligned_cols=64 Identities=19% Similarity=0.107 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEec
Q 047775 148 WFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLG 211 (386)
Q Consensus 148 ~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~ 211 (386)
-.+++.+|++++++.+++.++++.++.|++..++++++++|+++..+++|..+.+.|++.....
T Consensus 219 t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 219 TALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence 3457779999999999999999999999999999999999999999999999999998877543
No 51
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.35 E-value=2.1e-05 Score=72.37 Aligned_cols=136 Identities=14% Similarity=0.191 Sum_probs=93.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcC-C---CceecCCChhHHHHH
Q 047775 231 VGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGI-E---PKFTIPHSAKMEEVV 306 (386)
Q Consensus 231 ~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-e---~~~~~~~~~~~~~~i 306 (386)
.|..+.++++++|+...+..|.. .+ .+......+-.+++.+++.+. ....+. . +..+.....+.+..+
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~-~~----~~~~~i~~~R~~~a~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL-KP----LPATDILGHRMIWSFPFMLLS---VTLFRQWAALIERLKRIQKRPLILSL 73 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh-cc----CCHHHHHHHHHHHHHHHHHHH---HHHHcchHHHHHHHhCcccchHHHHH
Confidence 38899999999999999999973 21 333333333344444333221 111110 0 001111112223345
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHH-HHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc
Q 047775 307 LANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPL-AMVADMVIHGRHYSAIYILGSAQVFAGFVIVNV 376 (386)
Q Consensus 307 ~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~-a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~ 376 (386)
...|++ ..+.+.+++++++++++..+++..+.. |+ ++++++++++|+++..+++|.++.++|+.+...
T Consensus 74 ~~~g~~-~~~~~~~~~~a~~~~~~~~a~~l~~~~-Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~ 142 (256)
T TIGR00688 74 LLCGLL-IGFNWWLFIWAVNNGSSLEVSLGYLIN-PLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV 142 (256)
T ss_pred HHHHHH-HHHHHHHHHHHHHcchHHHHHHHHHHH-HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 556654 678899999999999999999999988 66 999999999999999999999999999887643
No 52
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.34 E-value=1.2e-06 Score=69.71 Aligned_cols=64 Identities=8% Similarity=0.032 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEE
Q 047775 146 PIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTT 209 (386)
Q Consensus 146 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~ 209 (386)
..+..+.+++..+++..+.+.+..+.++.++++.+++++++|||++++|++|+.+.++|++++.
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4566788899999999999999999999999999999999999999999999999999998764
No 53
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=98.33 E-value=1.2e-07 Score=83.51 Aligned_cols=220 Identities=15% Similarity=0.177 Sum_probs=156.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhc-ccHHHHHHHHHHhccccchHHH----HHHHHHhhhceEEE
Q 047775 134 TREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSS-TSGLFTLFIGAFMGQDTLNVAK----VVAVLVSMAGVAMT 208 (386)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~-~~p~~~~lls~~~~~ek~~~~~----~~~v~l~~~Gv~lv 208 (386)
..+.+..+++.+.+|-+.|..++.|+++..++++.-+.+ ..-+-+-+++++.++|-.+..+ .+|+++.++|+++-
T Consensus 55 T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lT 134 (288)
T COG4975 55 TLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLT 134 (288)
T ss_pred chhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEe
Confidence 357788899999999999999999999999999999965 6678889999999999887654 45888899999999
Q ss_pred EecCCCCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 047775 209 TLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTAL 288 (386)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 288 (386)
++.+..+.+++ +.++.-.|....+.|.+.|-.|.++.+-..- +..+.....+...+++.+. +...
T Consensus 135 s~~~~~nk~~~-----~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v---~g~saiLPqAiGMv~~ali-------~~~~ 199 (288)
T COG4975 135 SKQDRNNKEEE-----NPSNLKKGIVILLISTLGYVGYVVLFQLFDV---DGLSAILPQAIGMVIGALI-------LGFF 199 (288)
T ss_pred eeecccccccc-----ChHhhhhheeeeeeeccceeeeEeeeccccc---cchhhhhHHHHHHHHHHHH-------Hhhc
Confidence 98775433322 4555667999999999999999999887642 2333322233223333322 2222
Q ss_pred cCCCceecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHH----HHH
Q 047775 289 GIEPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYI----LGS 364 (386)
Q Consensus 289 ~~e~~~~~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~----~G~ 364 (386)
+.| .+.++..|.- +..|++ -.++...+..+.++.+-...-.+.-+...++.+-+.++++|+=|..++ +|.
T Consensus 200 ~~~----~~~~K~t~~n-ii~G~~-Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGi 273 (288)
T COG4975 200 KME----KRFNKYTWLN-IIPGLI-WAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGI 273 (288)
T ss_pred ccc----cchHHHHHHH-HhhHHH-HHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhH
Confidence 222 2334444543 345554 577788888888887755554455566456999999999999887664 577
Q ss_pred HHHHHHHHHH
Q 047775 365 AQVFAGFVIV 374 (386)
Q Consensus 365 ~lIi~g~~l~ 374 (386)
+++++|..+.
T Consensus 274 ilivvgai~l 283 (288)
T COG4975 274 ILIVVGAILL 283 (288)
T ss_pred HHHHHHhhhh
Confidence 8888876554
No 54
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.27 E-value=8.4e-06 Score=76.77 Aligned_cols=64 Identities=13% Similarity=0.020 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEe
Q 047775 147 IWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTL 210 (386)
Q Consensus 147 ~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~ 210 (386)
.-.+++++|++++++.+++.++.+.++.|++..++++++++|+++..+++|.++.+.|+++...
T Consensus 224 ~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 224 AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence 4456888999999999999999999999999999999999999999999999999999877654
No 55
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.19 E-value=1.9e-05 Score=74.47 Aligned_cols=66 Identities=18% Similarity=0.144 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 047775 147 IWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGK 212 (386)
Q Consensus 147 ~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~ 212 (386)
.-.++..+|+.++++.++++++.+..+.|++..++++++++|+++..+++|.++.++|+++...+.
T Consensus 224 ~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~ 289 (299)
T PRK11453 224 ATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL 289 (299)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence 344577789999999999999999999999999999999999999999999999999998765443
No 56
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.18 E-value=9.7e-06 Score=76.24 Aligned_cols=63 Identities=19% Similarity=0.166 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEe
Q 047775 148 WFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTL 210 (386)
Q Consensus 148 ~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~ 210 (386)
-..+..+|++++++.++++++.+.++.|++++++++++++|+++..+++|.++.+.|++++..
T Consensus 223 s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 223 SIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTL 285 (292)
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 345778999999999999999999999999999999999999999999999999999987654
No 57
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.13 E-value=3.2e-05 Score=65.17 Aligned_cols=73 Identities=11% Similarity=0.218 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEE
Q 047775 136 EIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMT 208 (386)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv 208 (386)
+.....+..+++++..|++.+..++++++...+++...-.+.+.++++++++|+++..++.|++++++|+++=
T Consensus 79 ~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y 151 (153)
T PF03151_consen 79 NFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY 151 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence 4444555667788889999999999999999999999999999999999999999999999999999998764
No 58
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.10 E-value=3e-05 Score=62.06 Aligned_cols=77 Identities=12% Similarity=0.160 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccchh
Q 047775 303 EEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRL 380 (386)
Q Consensus 303 ~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~ 380 (386)
+...+..|+.+...++.++.++.++.++ .++....+.+.+++++++++++|+++..+++|.+++++|++++..++-.
T Consensus 34 ~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 34 WLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 4445555666566889999999999995 7778888884449999999999999999999999999999999876543
No 59
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.10 E-value=4e-05 Score=61.00 Aligned_cols=67 Identities=19% Similarity=0.174 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc
Q 047775 310 GFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNV 376 (386)
Q Consensus 310 ~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~ 376 (386)
++++..+++.++..++++.+...+....++.+..+++.+++++||+++..+++|.++|+.|++++..
T Consensus 43 ~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 43 ALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 3356778999999999999999999988977334999999999999999999999999999988654
No 60
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.03 E-value=1.2e-05 Score=75.90 Aligned_cols=63 Identities=13% Similarity=0.173 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEe
Q 047775 148 WFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTL 210 (386)
Q Consensus 148 ~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~ 210 (386)
+...|.+++.++++++++++++.....|+++.++++++++|+++..+++|.++.++|+.+...
T Consensus 231 ~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 231 FHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence 444567888999999999999999999999999999999999999999999999999987654
No 61
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=97.94 E-value=9.7e-05 Score=71.30 Aligned_cols=68 Identities=9% Similarity=0.178 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEE
Q 047775 141 GFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMT 208 (386)
Q Consensus 141 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv 208 (386)
.+..++.+++.|.+.+++++++++.+.++..+..|+++.++++++++|+++..+++|.++.++|+++.
T Consensus 279 i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lY 346 (350)
T PTZ00343 279 IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLY 346 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHH
Confidence 34445566677777888999999999999999999999999999999999999999999999998764
No 62
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.77 E-value=7.7e-05 Score=60.93 Aligned_cols=69 Identities=17% Similarity=0.088 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHH--hccccchHHHHHHHHHhhhceEEEEecC
Q 047775 144 IAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAF--MGQDTLNVAKVVAVLVSMAGVAMTTLGK 212 (386)
Q Consensus 144 ~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~--~~~ek~~~~~~~~v~l~~~Gv~lv~~~~ 212 (386)
+...+..+.+++..+++..+++.+..+.+..++++.+.++. +++|++++.|++|+++.++|++++..++
T Consensus 54 gl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 54 GLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 34466778889999999999999999999999999888885 8999999999999999999999987543
No 63
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=97.70 E-value=0.00083 Score=61.34 Aligned_cols=138 Identities=17% Similarity=0.201 Sum_probs=96.1
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCceecCCChhHHHHHH
Q 047775 229 SLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTAL-GIEPKFTIPHSAKMEEVVL 307 (386)
Q Consensus 229 ~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~e~~~~~~~~~~~~~~i~ 307 (386)
...|.++++.|-+.|+.--.+.|-+.. .+....++.--+.+++.+... +... ++...++.-.+++.+....
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll~~-----~~~~eIlahRviwS~~~~l~l---l~~~r~~~~~~~~~~~p~~~~~~~ 76 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLLEP-----LPATEILAHRVIWSFPFMLAL---LFLLRQWRELKQLLKQPKTLLMLA 76 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHcc-----CCHHHHHHHHHHHHHHHHHHH---HHHHhhhHHHHHHHhCcHHHHHHH
Confidence 456999999999999999988887643 222233332222333322111 1111 1111122223455666666
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHH-HHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc
Q 047775 308 ANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPL-AMVADMVIHGRHYSAIYILGSAQVFAGFVIVNV 376 (386)
Q Consensus 308 ~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~-a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~ 376 (386)
..++. -......+.++...-....+|++.++. |+ .++++.++++|+++..|++..++-.+|+....+
T Consensus 77 l~a~l-i~~nW~lfiWAvn~g~~leaSLGY~In-PL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~ 144 (293)
T COG2962 77 LTALL-IGLNWWLFIWAVNNGHVLEASLGYFIN-PLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTW 144 (293)
T ss_pred HHHHH-HHHHHHHhheecCCCchhHHHhHHHHH-HHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 66665 577889999999999999999999999 76 999999999999999999999999999876543
No 64
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.64 E-value=0.00046 Score=55.40 Aligned_cols=70 Identities=21% Similarity=0.205 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHH-hhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccchhh
Q 047775 312 VGSVLSDYFWALCVVWTTPLVATLG-MSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRLS 381 (386)
Q Consensus 312 ~~s~l~~~l~~~~~~~~~~~~~s~~-~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~~ 381 (386)
.+-.++++++.+++++.+...+=.. .-+.....++.+++++||++|+.+++|.++|++|++.++...+++
T Consensus 38 ~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~~~ 108 (120)
T PRK10452 38 VMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTRKA 108 (120)
T ss_pred HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCCCC
Confidence 3457899999999999875554333 346645589999999999999999999999999999998765544
No 65
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.63 E-value=0.0015 Score=62.03 Aligned_cols=77 Identities=29% Similarity=0.344 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccchh
Q 047775 303 EEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRL 380 (386)
Q Consensus 303 ~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~ 380 (386)
|+--+..+++ -+-+.++.+.+.++++.+.+.+.....+|++++++++++++++++.+++|+++.+.|+.++...+..
T Consensus 79 ~w~y~lla~~-Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~ 155 (334)
T PF06027_consen 79 WWKYFLLALL-DVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVL 155 (334)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccc
Confidence 3333345664 6899999999999999999999999999999999999999999999999999999999988766543
No 66
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.62 E-value=0.00029 Score=66.19 Aligned_cols=70 Identities=11% Similarity=0.238 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHHHhc-ccchhhHHHhhcccHHHHHHHHHHhccccchHHHH----HHHHHhhhceEEEEe
Q 047775 141 GFYIAPIWFVTEYFSNAALA-RTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKV----VAVLVSMAGVAMTTL 210 (386)
Q Consensus 141 ~~~~~~~~~~~~~~~~~al~-~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~----~~v~l~~~Gv~lv~~ 210 (386)
.++.+++|..++.+|+.+++ +.+++.+..+.+..|+...+.+++++||+.+++++ +|.++.+.|+.++..
T Consensus 214 ~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 214 NILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence 34456668899999999999 99999999999999999999999999999999999 999999999887653
No 67
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.52 E-value=0.0049 Score=57.18 Aligned_cols=142 Identities=23% Similarity=0.220 Sum_probs=93.8
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHHHH
Q 047775 229 SLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLA 308 (386)
Q Consensus 229 ~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i~~ 308 (386)
...+....+..++.|+......|+...+ ..+..........+..... .+... .++....+.. ..+.....
T Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~-~~~~~~~~ 74 (292)
T COG0697 5 LLLGLLALLLWGLLWGLSFIALKLAVES---LDPFLFAAALRFLIAALLL----LPLLL--LEPRGLRPAL-RPWLLLLL 74 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc---cCChHHHHHHHHHHHHHHH----HHHHH--hhcccccccc-cchHHHHH
Confidence 4567788888889999999999987652 1111111111111122111 11111 1100011111 11334445
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHH-HHcCCcchHHHHHHHHHHHHHHHHHhccchh
Q 047775 309 NGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADM-VIHGRHYSAIYILGSAQVFAGFVIVNVSDRL 380 (386)
Q Consensus 309 ~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~-i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~ 380 (386)
.+.+.....+.+++.+++++++..++...+..+.+..++++ ++++|+++..++.|..+.+.|++++..++..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~ 147 (292)
T COG0697 75 LALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGG 147 (292)
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCc
Confidence 55666889999999999999999999999999444999996 7779999999999999999999998876543
No 68
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.46 E-value=0.0012 Score=52.33 Aligned_cols=68 Identities=18% Similarity=0.215 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHH-HhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccch
Q 047775 312 VGSVLSDYFWALCVVWTTPLVATL-GMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDR 379 (386)
Q Consensus 312 ~~s~l~~~l~~~~~~~~~~~~~s~-~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~ 379 (386)
.+-.++++++..++++.+...+=- ..-+.....++.+++++||++++.+++|..+|++|++..+..++
T Consensus 38 ~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~~ 106 (110)
T PRK09541 38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLSR 106 (110)
T ss_pred HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 345788999999999987554433 34456555899999999999999999999999999999987553
No 69
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.35 E-value=0.0022 Score=49.91 Aligned_cols=66 Identities=21% Similarity=0.263 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHhhhhH-HHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccc
Q 047775 313 GSVLSDYFWALCVVWTTPL-VATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSD 378 (386)
Q Consensus 313 ~s~l~~~l~~~~~~~~~~~-~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~ 378 (386)
+-.++|.+...++|..+-. --++..-..+...++.+++++||++++.+++|..+++.|++..+..+
T Consensus 39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s 105 (106)
T COG2076 39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS 105 (106)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence 3578899999999998743 33444556645589999999999999999999999999999988754
No 70
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.26 E-value=0.0028 Score=49.69 Aligned_cols=66 Identities=17% Similarity=0.131 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHhhhhHH-HHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccc
Q 047775 313 GSVLSDYFWALCVVWTTPLV-ATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSD 378 (386)
Q Consensus 313 ~s~l~~~l~~~~~~~~~~~~-~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~ 378 (386)
+-.+++++...++|+.+... -++..-+.....++.+++++||++++.+++|..+|+.|++..+..+
T Consensus 38 ~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~~ 104 (105)
T PRK11431 38 AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLST 104 (105)
T ss_pred HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhccC
Confidence 45789999999999887443 3444556655589999999999999999999999999999987543
No 71
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.09 E-value=0.0055 Score=48.33 Aligned_cols=64 Identities=17% Similarity=0.187 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHhhhhHHH-HHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc
Q 047775 313 GSVLSDYFWALCVVWTTPLVA-TLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNV 376 (386)
Q Consensus 313 ~s~l~~~l~~~~~~~~~~~~~-s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~ 376 (386)
+-.+++++...++|+.+...+ ++..-+.....++.+++++||++++.+++|.++|+.|++..+.
T Consensus 44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lkl 108 (109)
T PRK10650 44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIKL 108 (109)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 357899999999999874433 4444566455899999999999999999999999999998753
No 72
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.04 E-value=0.0014 Score=52.60 Aligned_cols=67 Identities=15% Similarity=0.262 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHhcccchhhHHHhh-cccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 047775 146 PIWFVTEYFSNAALARTSVASTTVLS-STSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGK 212 (386)
Q Consensus 146 ~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~ 212 (386)
.++..+.+++..++++.+.+.+=.+. ...-+.+.++++++++|++++.|++|+.+.++|++.+-..+
T Consensus 38 ~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 38 VMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 34556778889999999999998885 68899999999999999999999999999999998885443
No 73
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.89 E-value=0.0023 Score=50.64 Aligned_cols=64 Identities=11% Similarity=0.159 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHhcccchhhHHHhh-cccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEe
Q 047775 147 IWFVTEYFSNAALARTSVASTTVLS-STSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTL 210 (386)
Q Consensus 147 ~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~ 210 (386)
.+..+.+++..++++.|.+.+=.+. ...-+.+.++++++++|++++.+++|+.+.++|++++-.
T Consensus 39 ~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 4556677788999999999998884 578999999999999999999999999999999998854
No 74
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=96.84 E-value=0.0099 Score=55.96 Aligned_cols=119 Identities=15% Similarity=0.073 Sum_probs=79.9
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHH
Q 047775 227 KRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVV 306 (386)
Q Consensus 227 ~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i 306 (386)
.+...|..+++.++++.+....++||-..+.+. .....-- . . ...-.++..|..+
T Consensus 3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~-~~~~~~~---~--~-------------------~~~l~~~~W~~G~ 57 (300)
T PF05653_consen 3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR-GSLRAGS---G--G-------------------RSYLRRPLWWIGL 57 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccccccc---h--h-------------------hHHHhhHHHHHHH
Confidence 357789999999999999999999986543221 0000000 0 0 0000011122222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHh
Q 047775 307 LANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVN 375 (386)
Q Consensus 307 ~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~ 375 (386)
+ ..+++..+...+....+.+.++....+..+++++++..++||+++..+++|+++++.|..+..
T Consensus 58 ~-----~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 58 L-----LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred H-----HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 2 123344445566777788888888888877799999999999999999999999999987654
No 75
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=96.80 E-value=0.054 Score=44.81 Aligned_cols=131 Identities=17% Similarity=0.152 Sum_probs=81.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcee-cCCChhHHHHHHHHH
Q 047775 232 GDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFT-IPHSAKMEEVVLANG 310 (386)
Q Consensus 232 G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~-~~~~~~~~~~i~~~~ 310 (386)
..++++.+.++-+++..+..++.++-+++..........|.....+. ....+.+. .+ .+. . .|+. ..-|
T Consensus 2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~------~~~~~~~~-~~~~~~-~-p~w~-~lGG 71 (138)
T PF04657_consen 2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLII------LLITGRPS-LASLSS-V-PWWA-YLGG 71 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH------HHHhcccc-cchhcc-C-ChHH-hccH
Confidence 35688889999999999998887653334433333333343333321 12211111 11 111 1 1222 2245
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHH-HHHHHHH----HcCCcchHHHHHHHHHHHHHHHH
Q 047775 311 FVGSVLSDYFWALCVVWTTPLVATLGMSLTIPL-AMVADMV----IHGRHYSAIYILGSAQVFAGFVI 373 (386)
Q Consensus 311 i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~-a~i~~~i----~~ge~~~~~~~~G~~lIi~g~~l 373 (386)
++ +++.-.+....+++.+++.+.......=-+ +.++|.+ .-.+++++.+++|.+++++|+++
T Consensus 72 ~l-G~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 72 LL-GVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HH-HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 54 566667778888999988887766665455 8888886 24578999999999999999864
No 76
>PRK13499 rhamnose-proton symporter; Provisional
Probab=96.73 E-value=0.038 Score=52.75 Aligned_cols=141 Identities=16% Similarity=0.194 Sum_probs=88.7
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCceecCCChhHHHHH
Q 047775 228 RSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTAL-GIEPKFTIPHSAKMEEVV 306 (386)
Q Consensus 228 ~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~e~~~~~~~~~~~~~~i 306 (386)
+...|.++++++++|++.+.+-.||. ++ .+...+....+++..++ .|........ ++.... ...+...+..-
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~~-k~----w~wE~~W~v~gi~~wl~-~~~~~g~~~~~~f~~~~-~~~~~~~~~~~ 76 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKKV-KK----WSWETMWSVGGIFSWLI-LPWLIAALLLPDFWAYY-SSFSGSTLLPV 76 (345)
T ss_pred hhHHHHHHHHHHHHHhhccccccccc-CC----CchhHHHHHHHHHHHHH-HHHHHHHHHhhhHHHHH-HhcCHHHHHHH
Confidence 46789999999999999999999983 21 22222222223333322 2211111110 000001 11345556666
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHH-hhhhHHHHHHHHHHHcCCcc-------hHHHHHHHHHHHHHHHHHhc
Q 047775 307 LANGFVGSVLSDYFWALCVVWTTPLVATLG-MSLTIPLAMVADMVIHGRHY-------SAIYILGSAQVFAGFVIVNV 376 (386)
Q Consensus 307 ~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~-~~l~~p~a~i~~~i~~ge~~-------~~~~~~G~~lIi~g~~l~~~ 376 (386)
...|++ -.++...+..++++.+.+..-.. .-++..++.++..+++||-. ....++|.+++++|+++..+
T Consensus 77 ~l~G~~-W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~ 153 (345)
T PRK13499 77 FLFGAL-WGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR 153 (345)
T ss_pred HHHHHH-HHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 666765 78899999999999996655443 33554458889999998754 23578899999999999887
No 77
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.70 E-value=0.005 Score=48.55 Aligned_cols=62 Identities=16% Similarity=0.083 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHhcccchhhHHHhh-cccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEE
Q 047775 147 IWFVTEYFSNAALARTSVASTTVLS-STSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMT 208 (386)
Q Consensus 147 ~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv 208 (386)
.+..+.++...++++.|.+.+=.+. ..-.+.+.+.++++++|++++.|++++.+.++|++.+
T Consensus 44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 4455677888999999999988875 4778999999999999999999999999999998765
No 78
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.70 E-value=0.0056 Score=47.99 Aligned_cols=63 Identities=11% Similarity=0.132 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHhcccchhhHHHhhc-ccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEE
Q 047775 147 IWFVTEYFSNAALARTSVASTTVLSS-TSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTT 209 (386)
Q Consensus 147 ~~~~~~~~~~~al~~~~~~~~~~i~~-~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~ 209 (386)
++..+.++...+++..|.+.+=.+.. .-.+.+.+.++++++|++++.|++++.+.++|++.+-
T Consensus 38 ~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 38 AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 44556778889999999999888764 7889999999999999999999999999999998873
No 79
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.67 E-value=0.0047 Score=48.06 Aligned_cols=62 Identities=16% Similarity=0.231 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHhcccchhhHHHhh-cccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEE
Q 047775 148 WFVTEYFSNAALARTSVASTTVLS-STSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTT 209 (386)
Q Consensus 148 ~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~ 209 (386)
+..+.++...|+++.+.+.+=.+. ..-.+.+.+.++++++|+++..|++++.+.++|++.+-
T Consensus 40 ~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk 102 (106)
T COG2076 40 YGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhh
Confidence 344566778899999999987775 57789999999999999999999999999999988763
No 80
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=96.66 E-value=0.074 Score=50.19 Aligned_cols=73 Identities=18% Similarity=0.135 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccchh
Q 047775 307 LANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRL 380 (386)
Q Consensus 307 ~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~ 380 (386)
...++ ...++..+.+.++++++...-.+..+..++..++++++++|++.+..++++.+++.+|+.+....+.+
T Consensus 68 ~~~~~-~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~ 140 (303)
T PF08449_consen 68 AILSF-LFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSS 140 (303)
T ss_pred HHHHH-HHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccc
Confidence 33344 36777788899999999888888888884449999999999999999999999999999998766533
No 81
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=96.17 E-value=0.034 Score=49.93 Aligned_cols=74 Identities=18% Similarity=0.157 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEE
Q 047775 136 EIATIGFYIAPI-WFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTT 209 (386)
Q Consensus 136 ~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~ 209 (386)
.++..++..+++ -.+.+.+-..+++..+...-+.+.++.|.+..+.++++++|+++..||+++...+++..-..
T Consensus 207 ~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~ 281 (292)
T COG5006 207 SLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGST 281 (292)
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccc
Confidence 455555554443 23345588899999999999999999999999999999999999999999888776655333
No 82
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=96.03 E-value=0.039 Score=50.36 Aligned_cols=67 Identities=15% Similarity=0.164 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccchh
Q 047775 314 SVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRL 380 (386)
Q Consensus 314 s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~ 380 (386)
-.+...+.+.++++.+|..-.+.....+++++++++++++.+++..+|++..+++.|+.+.+.+...
T Consensus 27 Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 27 YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 5667778889999999999999999998889999999999999999999999999999998876543
No 83
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.00 E-value=0.018 Score=44.17 Aligned_cols=54 Identities=15% Similarity=0.236 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHhcccchhhHHHh-hcccHHHHHHHHHHhccccchHHHHHHHHH
Q 047775 147 IWFVTEYFSNAALARTSVASTTVL-SSTSGLFTLFIGAFMGQDTLNVAKVVAVLV 200 (386)
Q Consensus 147 ~~~~~~~~~~~al~~~~~~~~~~i-~~~~p~~~~lls~~~~~ek~~~~~~~~v~l 200 (386)
.+..+.+++..++++.+.+.+=.+ ..+..+.+.+.+.++++|++++.|++|+.+
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l 92 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence 455667788999999999999665 468899999999999999999999999875
No 84
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=95.96 E-value=0.031 Score=42.86 Aligned_cols=55 Identities=25% Similarity=0.217 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHhhhhHHH-HHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHH
Q 047775 313 GSVLSDYFWALCVVWTTPLVA-TLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQV 367 (386)
Q Consensus 313 ~s~l~~~l~~~~~~~~~~~~~-s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lI 367 (386)
+-.++++++.+++++.+...+ ++..-+......+.+++++||++|+.+++|..+|
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 467888999999999886666 3344467455899999999999999999999876
No 85
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=95.54 E-value=0.19 Score=46.17 Aligned_cols=66 Identities=15% Similarity=0.290 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHH----HHHHhhhceE
Q 047775 141 GFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVV----AVLVSMAGVA 206 (386)
Q Consensus 141 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~----~v~l~~~Gv~ 206 (386)
.++.+++|..+|.+++.+.+....+.+-.+..+.++...+-+.+++||+=+++++. |+++.++|.+
T Consensus 198 nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 198 NILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred hhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence 35567789999999999999999999999999999999999999999999887665 4444445543
No 86
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=95.50 E-value=1.9 Score=40.90 Aligned_cols=234 Identities=15% Similarity=0.156 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHh-hcccHHHHHHHHHHhcc-------ccchHHHHHHHHHhhhceEEE
Q 047775 137 IATIGFYIAPIWFVTEYFSNAALARTSVASTTVL-SSTSGLFTLFIGAFMGQ-------DTLNVAKVVAVLVSMAGVAMT 208 (386)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i-~~~~p~~~~lls~~~~~-------ek~~~~~~~~v~l~~~Gv~lv 208 (386)
.+....+.+++|.+....|-.+++|...+...-| ..+..++-.++-.++.+ .+-....++|++++++|+.++
T Consensus 72 ~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~ 151 (344)
T PF06379_consen 72 TLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAIC 151 (344)
T ss_pred HHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHH
Confidence 3444566777999999999999999988776554 34554554444334322 233456888999999999999
Q ss_pred EecCCCCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhc------CCCC-Ccch----HHHHHHHHHHHHHHH
Q 047775 209 TLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFC------GEEG-EKID----VQKLFGYIGLFTLVA 277 (386)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~------~~~~-~~~~----~~~~~~~~~~~~~~~ 277 (386)
...+..-+.+.+ +..++.+...|.+++++|.+..|.++.-...-. .+++ ++.. ........|..+-..
T Consensus 152 g~AG~~Ke~~~~-~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~ 230 (344)
T PF06379_consen 152 GKAGSMKEKELG-EEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLI 230 (344)
T ss_pred hHHHHhhhhhhc-cchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHH
Confidence 876543211111 111334566899999999999999887663211 0001 1110 111111222222211
Q ss_pred HHHHHHHHHhh--cCC--Cceec--CCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhH--HHH--HHhhhhHHHHHHH
Q 047775 278 LWWLVWPLTAL--GIE--PKFTI--PHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPL--VAT--LGMSLTIPLAMVA 347 (386)
Q Consensus 278 l~~~~~~~~~~--~~e--~~~~~--~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~--~~s--~~~~l~~p~a~i~ 347 (386)
+. ...+.. .+. .+... |.-.......+..|++ -...+++|.++-.+.++. .++ +.+.+.+.++-+.
T Consensus 231 -yc--~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~l-Wy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvw 306 (344)
T PF06379_consen 231 -YC--LILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVL-WYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVW 306 (344)
T ss_pred -HH--HHHHhhcCCCccccccccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHH
Confidence 11 111111 010 00111 1001222233333443 456666777777777643 333 3334443336666
Q ss_pred HHHHcCC------cchHHHHHHHHHHHHHHHHHhc
Q 047775 348 DMVIHGR------HYSAIYILGSAQVFAGFVIVNV 376 (386)
Q Consensus 348 ~~i~~ge------~~~~~~~~G~~lIi~g~~l~~~ 376 (386)
+.+ ++| +.-..-++|.++++.++.++-+
T Consensus 307 Gl~-lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~ 340 (344)
T PF06379_consen 307 GLI-LKEWKGASKKTIRVLVLGIAVLILSVVIVGY 340 (344)
T ss_pred HHH-HHHhccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence 665 454 3334668899999999887654
No 87
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.39 E-value=0.051 Score=43.04 Aligned_cols=61 Identities=16% Similarity=0.230 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHhcccchhhHHHhh-cccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEE
Q 047775 148 WFVTEYFSNAALARTSVASTTVLS-STSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMT 208 (386)
Q Consensus 148 ~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv 208 (386)
.-.+...|++.+...+.+.+..+. ++.=++|.+.++++.+|..+++.++|+.+.+.|+.+.
T Consensus 51 Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 51 NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 344667889999999999999996 7788999999999988888999999999999999875
No 88
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=95.08 E-value=0.01 Score=53.50 Aligned_cols=137 Identities=14% Similarity=0.158 Sum_probs=85.4
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHHH
Q 047775 228 RSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVL 307 (386)
Q Consensus 228 ~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i~ 307 (386)
...+|..+.-.+ ..+....++.+|....++...+..... ...+.+.+. +.+. ..+ .--|...+.|+ +
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~~p~e~a~~r~l-~~mlit~pc-------liy~-~~~-v~gp~g~R~~L--i 101 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTKVLENDPMELASFRLL-VRMLITYPC-------LIYY-MQP-VIGPEGKRKWL--I 101 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhhhhccChhHhhhhhhh-hehhhhheE-------EEEE-eee-eecCCCcEEEE--E
Confidence 445677777777 777777778887765332222222211 111111111 1111 110 11233333442 2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccc
Q 047775 308 ANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSD 378 (386)
Q Consensus 308 ~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~ 378 (386)
.=|+. +..+..+.+++.++.+-+.++++....+.++++++|++++|++|..+.+|..+-+.|+++..++.
T Consensus 102 LRg~m-G~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp 171 (346)
T KOG4510|consen 102 LRGFM-GFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP 171 (346)
T ss_pred eehhh-hhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence 23333 34455667778899999999998888844499999999999999999999999999999987763
No 89
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=94.97 E-value=0.056 Score=51.26 Aligned_cols=147 Identities=12% Similarity=0.159 Sum_probs=103.8
Q ss_pred hhhHHHHHHHHHHHHHHHhhHHHHHHHHhcC----CCcEEeeeecchhHHHHHHHHHHHHHHHHHhhhccccccchhhhh
Q 047775 3 WRYRAGLFLISAVVIIWVTSAEVTQDIFSDY----KQPFAVTYLGASLMVVYLPVAFLKDWFCNLLKRRSSKSVKDAETL 78 (386)
Q Consensus 3 ~~~~~g~~~~l~~~~~w~~~~~~~~~~~~~~----~~P~~~~~~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (386)
.|..+|-++.++.+++++.-..+.|+-..+. +-|.|+-|+...-+.+++|..++.. .. ++++
T Consensus 243 ~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~----~~-~~e~--------- 308 (416)
T KOG2765|consen 243 SRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILD----FF-GEER--------- 308 (416)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHH----Hh-ccCc---------
Confidence 3567899999999999999999998877754 3455555555555566676544421 11 1111
Q ss_pred hccccccCCCccccchhhhhhccccccCCcccCCCcccCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047775 79 NETSAALNSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAA 158 (386)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 158 (386)
.+. |+. .....++..++ +.-+++.++|-+|
T Consensus 309 ------------------------------F~l-------P~~----------~q~~~vv~~~l---igtvvSDylW~~a 338 (416)
T KOG2765|consen 309 ------------------------------FEL-------PSS----------TQFSLVVFNNL---IGTVVSDYLWAKA 338 (416)
T ss_pred ------------------------------ccC-------CCC----------ceeEeeeHhhH---HHHHHHHHHHHHH
Confidence 000 000 00112223333 3445789999999
Q ss_pred hcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCC
Q 047775 159 LARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKT 213 (386)
Q Consensus 159 l~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~ 213 (386)
.-.|++-.+++-.+++.-..++.-.++.++++++..++|.+..++|-+++...+.
T Consensus 339 ~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 339 VLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred HHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence 9999999999999988888889999999999999999999999999999887664
No 90
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.70 E-value=1.2 Score=37.23 Aligned_cols=139 Identities=17% Similarity=0.106 Sum_probs=71.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHHHHH
Q 047775 230 LVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLAN 309 (386)
Q Consensus 230 ~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i~~~ 309 (386)
.+..++++++.++-.++.-+..++.+.-+++..........|...+..+. .... -++.+..-.+. -|+.. .-
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~-----l~~~-~~~~~a~~~~~-pwW~~-~G 75 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILL-----LIKQ-GHPGLAAVASA-PWWAW-IG 75 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHH-----HHhc-CCCchhhccCC-chHHH-Hc
Confidence 45678889999999999988888776433333222233333433333221 1111 11112210111 12221 12
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHH-HHHhhhhHHHHHHHHHHHcC----CcchHHHHHHHHHHHHHHHHHhcc
Q 047775 310 GFVGSVLSDYFWALCVVWTTPLVA-TLGMSLTIPLAMVADMVIHG----RHYSAIYILGSAQVFAGFVIVNVS 377 (386)
Q Consensus 310 ~i~~s~l~~~l~~~~~~~~~~~~~-s~~~~l~~p~a~i~~~i~~g----e~~~~~~~~G~~lIi~g~~l~~~~ 377 (386)
|+++ ++--..-.....+.+++.. .....=+...++++|-+=+. .+++...++|.+++++|+++.++.
T Consensus 76 G~lG-a~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~ 147 (150)
T COG3238 76 GLLG-AIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF 147 (150)
T ss_pred cchh-hhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence 2332 2222222334455554433 33333342337777766554 578999999999999996665543
No 91
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=93.96 E-value=1.5 Score=41.57 Aligned_cols=141 Identities=18% Similarity=0.253 Sum_probs=85.0
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcee--cCCChhHHHH
Q 047775 228 RSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFT--IPHSAKMEEV 305 (386)
Q Consensus 228 ~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~--~~~~~~~~~~ 305 (386)
....|.++..+++++.+.+.+=.||.. +.++-.+....++++.++ .|....... .++.++ -..+...+..
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk-----~WsWEs~Wlv~gi~swli-~P~~~a~l~--ip~~~~i~~~~~~~~l~~ 75 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKVK-----GWSWESYWLVQGIFSWLI-VPWLWALLA--IPDFFSIYSATPASTLFW 75 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhcC-----CccHHHHHHHHHHHHHHH-HHHHHHHHh--CCcHHHHHHhCChhHHHH
Confidence 467899999999999999999999863 344544444456666654 333221111 221111 1112233444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhH-HHHHHhhhhHHHHHHHHHHHcCC-------cchHHHHHHHHHHHHHHHHHhcc
Q 047775 306 VLANGFVGSVLSDYFWALCVVWTTPL-VATLGMSLTIPLAMVADMVIHGR-------HYSAIYILGSAQVFAGFVIVNVS 377 (386)
Q Consensus 306 i~~~~i~~s~l~~~l~~~~~~~~~~~-~~s~~~~l~~p~a~i~~~i~~ge-------~~~~~~~~G~~lIi~g~~l~~~~ 377 (386)
....|++ -.++-..|-.++|+++-+ -.++..-+...++.++--++.|+ +-....++|.++.++|+.+..+.
T Consensus 76 ~~l~G~l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A 154 (344)
T PF06379_consen 76 TFLFGVL-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA 154 (344)
T ss_pred HHHHHHH-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence 4555554 567777788889988843 44444444444455554444432 22457889999999999988653
No 92
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=93.25 E-value=0.03 Score=50.04 Aligned_cols=132 Identities=14% Similarity=0.126 Sum_probs=84.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHHHHHHH
Q 047775 232 GDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGF 311 (386)
Q Consensus 232 G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i~~~~i 311 (386)
+.+++++=++.|+..-....|.-.+ +. .+..+. .++.++.. +.+... ..+ ..+...+..-...|.
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~GG~---p~--qQ~lGt--T~GALifa---iiv~~~-~~p----~~T~~~~iv~~isG~ 67 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKFGGK---PY--QQTLGT--TLGALIFA---IIVFLF-VSP----ELTLTIFIVGFISGA 67 (288)
T ss_pred hHHHHHHHHHHhcccceeeeecCCC---hh--Hhhhhc--cHHHHHHH---HHHhee-ecC----ccchhhHHHHHHhhh
Confidence 4678889999999988888776542 22 222221 11111100 111111 111 123344554555566
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHH-HHHHHHHHcCCcchHHHH----HHHHHHHHHHHHHhccch
Q 047775 312 VGSVLSDYFWALCVVWTTPLVATLGMSLTIPL-AMVADMVIHGRHYSAIYI----LGSAQVFAGFVIVNVSDR 379 (386)
Q Consensus 312 ~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~-a~i~~~i~~ge~~~~~~~----~G~~lIi~g~~l~~~~~~ 379 (386)
+ -.+++..++++++..+.+++....+=.=-+ +.+++++.+||..+..++ +..+++++|+++..+.+|
T Consensus 68 ~-Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~ 139 (288)
T COG4975 68 F-WSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR 139 (288)
T ss_pred H-hhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence 5 778999999999999988887666533244 899999999999987554 467889999999887765
No 93
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=92.81 E-value=0.15 Score=45.79 Aligned_cols=58 Identities=2% Similarity=0.027 Sum_probs=52.9
Q ss_pred HHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEE
Q 047775 150 VTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAM 207 (386)
Q Consensus 150 ~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~l 207 (386)
..+.+..+.++|.++...++...+.++++.+++.++++|+++..+++|+.+.+.|+.+
T Consensus 164 ~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 164 GGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred hcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 3455678889999999999999999999999999999999999999999999999764
No 94
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=92.07 E-value=0.13 Score=48.45 Aligned_cols=64 Identities=11% Similarity=0.197 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEE
Q 047775 146 PIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTT 209 (386)
Q Consensus 146 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~ 209 (386)
++.+..|...|..+..++|-+-++....--+++.+.|+++++++.++.+..|..+++.|+++-.
T Consensus 243 v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 243 VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS 306 (316)
T ss_pred HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence 5677889999999999999999999988888888999999999999999999999999987654
No 95
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=91.84 E-value=1 Score=37.24 Aligned_cols=55 Identities=22% Similarity=0.364 Sum_probs=41.2
Q ss_pred HHHHHHhcccchhhHHHhhcccHHHH-HHHHHH----hccccchHHHHHHHHHhhhceEE
Q 047775 153 YFSNAALARTSVASTTVLSSTSGLFT-LFIGAF----MGQDTLNVAKVVAVLVSMAGVAM 207 (386)
Q Consensus 153 ~~~~~al~~~~~~~~~~i~~~~p~~~-~lls~~----~~~ek~~~~~~~~v~l~~~Gv~l 207 (386)
.+..+..+...++.++.+.-+.-+.. .++-.+ ..|+++++.|++|+++.++|+.+
T Consensus 79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 34477889999998888876554444 444443 36889999999999999999864
No 96
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=90.95 E-value=0.48 Score=37.54 Aligned_cols=59 Identities=17% Similarity=0.119 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHhhhhHHHHHH-hhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHH
Q 047775 315 VLSDYFWALCVVWTTPLVATLG-MSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVI 373 (386)
Q Consensus 315 ~l~~~l~~~~~~~~~~~~~s~~-~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l 373 (386)
..+-..|++.+.+.+-+.+... +++...++++.++++.+|..+...++|+++|+.|+.+
T Consensus 52 q~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 52 QSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 3344556667777775555555 4677556999999888888899999999999999764
No 97
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=90.86 E-value=0.2 Score=43.34 Aligned_cols=65 Identities=14% Similarity=0.312 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccch
Q 047775 315 VLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDR 379 (386)
Q Consensus 315 ~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~ 379 (386)
..+.++|..++++.+|+.++-.....-.+..+++++.+|+++....++.+++-+.|+++..+.+.
T Consensus 64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN 128 (290)
T KOG4314|consen 64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN 128 (290)
T ss_pred ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence 34678889999999999999888888777999999999999999999999999999988776543
No 98
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.90 E-value=0.22 Score=46.45 Aligned_cols=122 Identities=16% Similarity=0.147 Sum_probs=78.4
Q ss_pred CCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHH
Q 047775 225 NGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEE 304 (386)
Q Consensus 225 ~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~ 304 (386)
...++..|..+++.+.+..+...++.||-..+... . + .-. .|.....-..+..|.
T Consensus 15 ~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~-------~---~-------------~ra--~~gg~~yl~~~~Ww~ 69 (335)
T KOG2922|consen 15 MSSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA-------S---G-------------LRA--GEGGYGYLKEPLWWA 69 (335)
T ss_pred hccCceeeeeehhhccEEEeeehhhhHHHHHHHhh-------h---c-------------ccc--cCCCcchhhhHHHHH
Confidence 45567889999999999999999988886543100 0 0 011 111111111111222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc
Q 047775 305 VVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNV 376 (386)
Q Consensus 305 ~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~ 376 (386)
.++..++ +-+..|..|.+ .+++.++....+.++.+++++..+++|+++....+|+++.++|-.+...
T Consensus 70 G~ltm~v-Gei~NFaAYaF----APasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ 136 (335)
T KOG2922|consen 70 GMLTMIV-GEIANFAAYAF----APASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI 136 (335)
T ss_pred HHHHHHH-HhHhhHHHHhh----chHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence 2332222 34444444444 4677778778888777999999999999999999999999999665543
No 99
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=84.29 E-value=1.9 Score=38.52 Aligned_cols=64 Identities=9% Similarity=0.267 Sum_probs=55.6
Q ss_pred HHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 047775 149 FVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGK 212 (386)
Q Consensus 149 ~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~ 212 (386)
.+.|++.|.-+.+-++-.-+++..+--+||.+.|++++...++.+||+|..+.+.|...=+..+
T Consensus 252 ~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~G 315 (337)
T KOG1580|consen 252 CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDG 315 (337)
T ss_pred HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcC
Confidence 3578888888888889899999999999999999999999999999999999999876644333
No 100
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=82.63 E-value=19 Score=33.75 Aligned_cols=145 Identities=18% Similarity=0.276 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhc----CCCcEEeee-ecchhHHHHHHHHHHHHHHHHHhhhccccccchhhhhhcc
Q 047775 7 AGLFLISAVVIIWVTSAEVTQDIFSD----YKQPFAVTY-LGASLMVVYLPVAFLKDWFCNLLKRRSSKSVKDAETLNET 81 (386)
Q Consensus 7 ~g~~~~l~~~~~w~~~~~~~~~~~~~----~~~P~~~~~-~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (386)
.|..++..+.++-|.--..+|.+..+ -..|+-..+ .+..++..++|..+. ++.......
T Consensus 164 ~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~-------fEG~~~~~~--------- 227 (349)
T KOG1443|consen 164 EGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLL-------FEGLHLITS--------- 227 (349)
T ss_pred hhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHH-------Hcccccchh---------
Confidence 57888888888888878889998875 346875554 444444455665443 122111000
Q ss_pred ccccCCCccccchhhhhhccccccCCcccCCCcccCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 047775 82 SAALNSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAALAR 161 (386)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 161 (386)
++..+..+ ....++.+..+++. +..-|+....-+.=+..
T Consensus 228 --------------------------s~~f~~~d--------------~~~~~rv~g~i~l~-g~laF~l~~sEflLl~~ 266 (349)
T KOG1443|consen 228 --------------------------SSIFRFQD--------------TGLILRVIGLISLG-GLLAFLLEFSEFLLLSR 266 (349)
T ss_pred --------------------------hhHHHhcC--------------ccHHHHHHHHHHHH-HHHHHHHHHHHHheeee
Confidence 00000000 00123333333333 33333444455666777
Q ss_pred cchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEE
Q 047775 162 TSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMT 208 (386)
Q Consensus 162 ~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv 208 (386)
|+.-..++..----+.+.+++.++++++++...|.|..++..|+.+=
T Consensus 267 Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 267 TSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred ccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 77777777766778889999999999999999999999999998876
No 101
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=80.72 E-value=42 Score=31.60 Aligned_cols=71 Identities=20% Similarity=0.305 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 047775 142 FYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGK 212 (386)
Q Consensus 142 ~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~ 212 (386)
.+.|++-+.-+++-++..+.+++...++.....-..+.+-..++.++++++..++|+.+++.|-++-.+..
T Consensus 232 ~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~ 302 (314)
T KOG1444|consen 232 LLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYAT 302 (314)
T ss_pred HHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhh
Confidence 33444556778889999999999999999977788888888888999999999999999999977765543
No 102
>PRK02237 hypothetical protein; Provisional
Probab=79.30 E-value=12 Score=29.13 Aligned_cols=37 Identities=14% Similarity=0.184 Sum_probs=32.6
Q ss_pred HHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccc
Q 047775 342 PLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSD 378 (386)
Q Consensus 342 p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~ 378 (386)
..+.+..+.+-|++|+..+++|+++.++|+.+.....
T Consensus 71 ~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 71 AGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 5588999999999999999999999999998776544
No 103
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=79.29 E-value=60 Score=31.03 Aligned_cols=62 Identities=16% Similarity=0.223 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcc
Q 047775 316 LSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVS 377 (386)
Q Consensus 316 l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~ 377 (386)
+-+.+++.+..+.+|+.-.+...+-+.-++++.+++++++++..||...++..+|+.+++.+
T Consensus 104 lqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~ 165 (345)
T KOG2234|consen 104 LQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLP 165 (345)
T ss_pred HhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 34457788889999999999999997779999999999999999999999999999999843
No 104
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=77.49 E-value=7.2 Score=35.95 Aligned_cols=64 Identities=16% Similarity=0.081 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc
Q 047775 313 GSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNV 376 (386)
Q Consensus 313 ~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~ 376 (386)
+-..+-.+.+.|+..++++.-.+.---.+.+..+++.-+++..++..+|+|...+..|++++-.
T Consensus 95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~ 158 (372)
T KOG3912|consen 95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGS 158 (372)
T ss_pred HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeee
Confidence 3556666777888888877766665566566889999999999999999999999999887644
No 105
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=74.06 E-value=10 Score=29.55 Aligned_cols=38 Identities=16% Similarity=0.250 Sum_probs=33.3
Q ss_pred HHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccch
Q 047775 342 PLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDR 379 (386)
Q Consensus 342 p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~ 379 (386)
..+.+..+.+-|++|+..+++|+.+.++|+.+.....|
T Consensus 69 ~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR 106 (107)
T PF02694_consen 69 VASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR 106 (107)
T ss_pred HHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence 55889999999999999999999999999988766543
No 106
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=73.55 E-value=4.1 Score=31.61 Aligned_cols=30 Identities=7% Similarity=0.087 Sum_probs=25.7
Q ss_pred HHHHHHHcCCcchHHHHHHHHHHHHHHHHH
Q 047775 345 MVADMVIHGRHYSAIYILGSAQVFAGFVIV 374 (386)
Q Consensus 345 ~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~ 374 (386)
+.+++++++|++++.++.|.++++.+++.+
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 456678899999999999999999987754
No 107
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=67.96 E-value=28 Score=26.60 Aligned_cols=33 Identities=3% Similarity=-0.045 Sum_probs=28.5
Q ss_pred HHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc
Q 047775 344 AMVADMVIHGRHYSAIYILGSAQVFAGFVIVNV 376 (386)
Q Consensus 344 a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~ 376 (386)
=+.++++.++|++.+.++.|..++..|++++-+
T Consensus 83 Fv~Fsvfyl~epl~~~~l~a~~~i~gav~fiFr 115 (116)
T COG3169 83 FVPFSVFYLKEPLRWNYLWAFLLILGAVYFIFR 115 (116)
T ss_pred HHHHHHHHHcCcchHHHHHHHHHHHHHHHHhcc
Confidence 345788899999999999999999999987654
No 108
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=65.65 E-value=6.9 Score=30.44 Aligned_cols=54 Identities=11% Similarity=0.119 Sum_probs=41.1
Q ss_pred hcccchhhHHHh-hcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 047775 159 LARTSVASTTVL-SSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGK 212 (386)
Q Consensus 159 l~~~~~~~~~~i-~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~ 212 (386)
++-.+.+.+=.- .....+...+..+.+-++|++...++|..++++|+.++.+..
T Consensus 51 l~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 51 LQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred cCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 444444443333 346677788888999999999999999999999999988753
No 109
>PRK02237 hypothetical protein; Provisional
Probab=62.50 E-value=7.9 Score=30.22 Aligned_cols=42 Identities=7% Similarity=-0.027 Sum_probs=35.5
Q ss_pred hcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 047775 171 SSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGK 212 (386)
Q Consensus 171 ~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~ 212 (386)
...+.+...+..+..-++|++...++|..++++|+.++.+..
T Consensus 66 GGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 66 GGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 345677777888999999999999999999999998887643
No 110
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=61.31 E-value=2.4e+02 Score=30.45 Aligned_cols=44 Identities=11% Similarity=0.099 Sum_probs=31.4
Q ss_pred hhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEE
Q 047775 165 ASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMT 208 (386)
Q Consensus 165 ~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv 208 (386)
+.+.++..+.|+-.+.++.....+|.+...+.+.+-.++|.+-+
T Consensus 11 gRa~il~~l~PFg~af~~a~~~~~~~~~~~~~~~~~~~~G~~t~ 54 (764)
T TIGR02865 11 GRAVIVSPMAPFGIAFLAAVLLAKKGGDKAFFSALGVLLGAISI 54 (764)
T ss_pred hHHHHhcCCCchHHHHHHHHHHhhcccchHHHHHHHHHHHHHHh
Confidence 56678889999999999988876665444455555566665544
No 111
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=60.69 E-value=18 Score=27.97 Aligned_cols=43 Identities=14% Similarity=0.053 Sum_probs=36.3
Q ss_pred hhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 047775 170 LSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGK 212 (386)
Q Consensus 170 i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~ 212 (386)
-...+.+...+..+..-+.++++..++|..++++|+.++.+..
T Consensus 64 YGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 64 YGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred hcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence 3456677777888888999999999999999999999888754
No 112
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=60.50 E-value=43 Score=27.98 Aligned_cols=52 Identities=23% Similarity=0.445 Sum_probs=31.8
Q ss_pred HHhcccchhhHHHhh-cccHHHHHHHHHH----hccccchHHHHHHHHHhhhceEEE
Q 047775 157 AALARTSVASTTVLS-STSGLFTLFIGAF----MGQDTLNVAKVVAVLVSMAGVAMT 208 (386)
Q Consensus 157 ~al~~~~~~~~~~i~-~~~p~~~~lls~~----~~~ek~~~~~~~~v~l~~~Gv~lv 208 (386)
...+...++....+. .-.-+..+++-.+ .-++++++.+++|+++.++|++++
T Consensus 88 ~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 88 LLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred HhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence 344555555544443 3334444444332 236889999999999999995544
No 113
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=58.38 E-value=6.3 Score=36.74 Aligned_cols=71 Identities=15% Similarity=0.221 Sum_probs=57.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEE
Q 047775 133 TTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAM 207 (386)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~l 207 (386)
..++++.++..++ ++|.+-|+-++.=.+-.-+.|..+--++..+++.+..+.++++.+|+|+.+-+.|+.+
T Consensus 240 ~~~Di~l~s~~ga----vGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 240 VAFDILLYSTCGA----VGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred HHHHHHHHHHhhh----hhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 3566666665554 4777777788777777778888899999999999999999999999999888777654
No 114
>PF13127 DUF3955: Protein of unknown function (DUF3955)
Probab=57.52 E-value=7.8 Score=27.23 Aligned_cols=44 Identities=20% Similarity=0.239 Sum_probs=36.1
Q ss_pred hhhHHHHHHHHHHHHHHHhhHHHHHHHHhc--CCCcEEeeeecchh
Q 047775 3 WRYRAGLFLISAVVIIWVTSAEVTQDIFSD--YKQPFAVTYLGASL 46 (386)
Q Consensus 3 ~~~~~g~~~~l~~~~~w~~~~~~~~~~~~~--~~~P~~~~~~~~~~ 46 (386)
++..++.+++++..++|...+...+++-+| -..||++.-+....
T Consensus 2 ~~~~l~~~~~llg~~~l~i~~~~~syVd~~G~L~EpFfLiPlg~l~ 47 (63)
T PF13127_consen 2 KKYILSLILLLLGVVCLFIFNIIGSYVDEDGVLHEPFFLIPLGYLF 47 (63)
T ss_pred cchHHHHHHHHHHHHHHHHHhcccceECCCCeEecccHHHHHHHHH
Confidence 688899999999999999999999999887 46787666555444
No 115
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=50.94 E-value=46 Score=25.83 Aligned_cols=37 Identities=16% Similarity=0.212 Sum_probs=31.8
Q ss_pred HHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccc
Q 047775 342 PLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSD 378 (386)
Q Consensus 342 p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~ 378 (386)
..+.+..+..-|..|+..+++|..+-+.|+.++....
T Consensus 70 ~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 70 AASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred HHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence 5588899999999999999999999999987766553
No 116
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=48.18 E-value=1.1e+02 Score=23.79 Aligned_cols=51 Identities=14% Similarity=0.108 Sum_probs=34.5
Q ss_pred HhcccchhhHHHhhc-ccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEE
Q 047775 158 ALARTSVASTTVLSS-TSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMT 208 (386)
Q Consensus 158 al~~~~~~~~~~i~~-~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv 208 (386)
|-+.-+++.--+++= .+-.....++.+++||+++|....|-++.+.++..+
T Consensus 55 G~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 55 GYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred hccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 444455555555543 233344566788999999999999988877776654
No 117
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=47.05 E-value=59 Score=29.83 Aligned_cols=116 Identities=11% Similarity=0.146 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHH-HHHHHH-hcc---ccc--hHHHHHHHHHhhhceEEEEec
Q 047775 139 TIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFT-LFIGAF-MGQ---DTL--NVAKVVAVLVSMAGVAMTTLG 211 (386)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~-~lls~~-~~~---ek~--~~~~~~~v~l~~~Gv~lv~~~ 211 (386)
..+.+++.+|..+|.+-.-.++....+....+.++.-+.+ ...+.+ +++ |.+ .+...+|+++.++|..+...-
T Consensus 56 p~amlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fi 135 (254)
T PF07857_consen 56 PWAMLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFI 135 (254)
T ss_pred eHHHhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeee
Confidence 3577888899999999999999999999999988754433 333333 232 322 467888999999998877643
Q ss_pred CCCCc------c------c--cc--cc------cc------CCCcchhhhHHHHHHHHHHHHHHHHHHHhc
Q 047775 212 KTWAA------D------E--SQ--FS------AA------NGKRSLVGDLFGLLSAMSYGLFTVLLKKFC 254 (386)
Q Consensus 212 ~~~~~------~------~--~~--~~------~~------~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~ 254 (386)
..... + + ++ .+ .+ ..+....|..+++++.+.|+...+=...+.
T Consensus 136 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~ 206 (254)
T PF07857_consen 136 KSEEKEPKKSSEETPLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQ 206 (254)
T ss_pred cCCCCCccccccccccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHH
Confidence 22110 0 0 00 00 00 111356788888888888888766555443
No 118
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=46.92 E-value=46 Score=27.52 Aligned_cols=57 Identities=12% Similarity=0.070 Sum_probs=27.3
Q ss_pred HHhhhhHHHHHHhhhhHHHHHH-----HHHHHcCCcchHHHHHHHHHHHHHHHHHhccchhhhc
Q 047775 325 VVWTTPLVATLGMSLTIPLAMV-----ADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRLSKK 383 (386)
Q Consensus 325 ~~~~~~~~~s~~~~l~~p~a~i-----~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~~~~ 383 (386)
+..-+...++...|+.+++..+ .++++++|.+... .+......|++++.+.+||-++
T Consensus 69 i~EkslL~sA~LvYi~PL~~l~v~~~La~~L~~~e~~~~~--~~~lg~~l~fl~~r~ysRkl~~ 130 (150)
T COG3086 69 IEEKSLLKSALLVYIFPLVGLFLGAILAQYLFFSELIVIF--GAFLGLALGFLLARRYSRKLAK 130 (150)
T ss_pred cCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH--HHHHHHHHHHHHHHHHHHHhhh
Confidence 3344444555555555332433 3445555554432 2333455666666655544443
No 119
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=46.02 E-value=13 Score=28.92 Aligned_cols=59 Identities=14% Similarity=0.197 Sum_probs=47.6
Q ss_pred HHHHHHHHhcccchhhHHHhhc-ccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEE
Q 047775 151 TEYFSNAALARTSVASTTVLSS-TSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTT 209 (386)
Q Consensus 151 ~~~~~~~al~~~~~~~~~~i~~-~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~ 209 (386)
+..+||.-++.++.+.+.-+.+ +.-.|+.+.+..+.-|....+.++|..+.+.|+.+..
T Consensus 65 gSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 65 GSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred hHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 4568889999999988888764 5788999999888666677788889999999887653
No 120
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=45.19 E-value=57 Score=29.91 Aligned_cols=24 Identities=25% Similarity=0.340 Sum_probs=20.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcC
Q 047775 232 GDLFGLLSAMSYGLFTVLLKKFCG 255 (386)
Q Consensus 232 G~~l~l~aa~~~a~~~v~~k~~~~ 255 (386)
|.+.+++|+++++...+=.||...
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~ 24 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDT 24 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccC
Confidence 567789999999999999998764
No 121
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=39.85 E-value=1.1e+02 Score=28.50 Aligned_cols=49 Identities=10% Similarity=0.116 Sum_probs=37.6
Q ss_pred cchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEe
Q 047775 162 TSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTL 210 (386)
Q Consensus 162 ~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~ 210 (386)
+++-++++...+--++.+++|.+.++..+++..|+|..+.+.|.++-+.
T Consensus 266 ~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~ 314 (330)
T KOG1583|consen 266 TSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN 314 (330)
T ss_pred ecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3444555666666788888888888899999999999998888776553
No 122
>PF11742 DUF3302: Protein of unknown function (DUF3302); InterPro: IPR011223 This is a family of uncharacterised bacterial proteins, restricted to the Gammaproteobacteria.
Probab=39.58 E-value=1.5e+02 Score=21.75 Aligned_cols=62 Identities=23% Similarity=0.418 Sum_probs=37.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHH--HHhc-CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 047775 230 LVGDLFGLLSAMSYGLFTVLL--KKFC-GEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIE 291 (386)
Q Consensus 230 ~~G~~l~l~aa~~~a~~~v~~--k~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e 291 (386)
..+.++.+..++.|++..+-. .|.. +++....+.....++.++++.-.+||......+...|
T Consensus 5 a~~vli~~~~~~~~~~~~lh~lP~~iA~kr~Hpq~eaI~v~gwisLft~~~lWp~a~IwA~~d~~ 69 (78)
T PF11742_consen 5 ALVVLIFVVIVLIYGFWKLHDLPGKIAHKRNHPQAEAIHVLGWISLFTLHVLWPFAWIWAYLDRP 69 (78)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 356666677777777654422 2222 2223335556777888888877788887766654443
No 123
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=39.08 E-value=2.8 Score=38.40 Aligned_cols=59 Identities=19% Similarity=0.194 Sum_probs=49.6
Q ss_pred HHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcc
Q 047775 319 YFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVS 377 (386)
Q Consensus 319 ~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~ 377 (386)
.+-+..+++.+.+.--++-+++.|+++++.+++++++-+..-..++.+|+.|+.+-...
T Consensus 117 ~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdq 175 (347)
T KOG1442|consen 117 SFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQ 175 (347)
T ss_pred hccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheecccc
Confidence 34566778787777777788888999999999999999999999999999999876543
No 124
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=35.73 E-value=61 Score=29.03 Aligned_cols=61 Identities=13% Similarity=0.130 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhc
Q 047775 144 IAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAG 204 (386)
Q Consensus 144 ~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~G 204 (386)
-+++-++..++--|.++-++.+..+++.++.-.-..+-+.++++|+.+..++.++++++..
T Consensus 230 Sgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGfls 290 (309)
T COG5070 230 SGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLS 290 (309)
T ss_pred HHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHH
Confidence 3444445566777888889999999998888888888888888888888888887776544
No 125
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=34.27 E-value=2.2e+02 Score=22.04 Aligned_cols=55 Identities=18% Similarity=0.159 Sum_probs=24.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHHHHHHHHHHHHH
Q 047775 262 DVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLS 317 (386)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i~~~~i~~s~l~ 317 (386)
+....++.+|.++.-+..|.+.... .|.--+-.++........++..|++.++..
T Consensus 37 ~~~~~l~~~g~IG~~~v~pil~G~~-lG~WLD~~~~t~~~~tl~~lllGv~~G~~n 91 (100)
T TIGR02230 37 SIWEGLGMFGLIGWSVAIPTLLGVA-VGIWLDRHYPSPFSWTLTMLIVGVVIGCLN 91 (100)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhcCCCcHHHHHHHHHHHHHHHHH
Confidence 3455555566666666555543322 221101123333322334455566544433
No 126
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=32.57 E-value=4.7 Score=36.66 Aligned_cols=65 Identities=25% Similarity=0.302 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccc
Q 047775 314 SVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSD 378 (386)
Q Consensus 314 s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~ 378 (386)
.+=+.++..++-++++-+.+.+.-+-.+|...+++|++++.+-.+.++.|.++.+.|++++...+
T Consensus 88 DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sD 152 (336)
T KOG2766|consen 88 DVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSD 152 (336)
T ss_pred eecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEee
Confidence 56666777789999999999999999999999999999999999999999999999987765443
No 127
>PF01350 Flavi_NS4A: Flavivirus non-structural protein NS4A; InterPro: IPR000404 Flaviviruses encode a single polyprotein. This is cleaved into three structural and seven non-structural proteins. The NS4A protein is small and poorly conserved among the Flaviviruses. NS4A contains multiple hydrophobic potential membrane spanning regions []. NS4A has only been found in cells infected by Kunjin virus [].; GO: 0016032 viral reproduction, 0016070 RNA metabolic process, 0044423 virion part
Probab=31.48 E-value=3e+02 Score=22.80 Aligned_cols=59 Identities=17% Similarity=0.121 Sum_probs=39.4
Q ss_pred HHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccchhhhc
Q 047775 321 WALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRLSKK 383 (386)
Q Consensus 321 ~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~~~~ 383 (386)
..+.+++.+..+.+++.... ...+++.+---.++.++.|..++..=+.++..++.-+||
T Consensus 65 ~~~lm~~kgi~rm~lG~~vm----~~~~~llw~ggv~~~~IAg~~lv~filmvVLiPEpg~QR 123 (144)
T PF01350_consen 65 FWFLMRRKGIGRMSLGMLVM----AVAGYLLWMGGVPPGQIAGVLLVFFILMVVLIPEPGKQR 123 (144)
T ss_pred HHhhhcCCCcchhhHHHHHH----HHHHHHHHhcCCcHHHhHHHHHHHHHHHHhcccCCCCcC
Confidence 34456777778877654333 334445555568899999999998888887777644443
No 128
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=28.54 E-value=1.8e+02 Score=26.99 Aligned_cols=54 Identities=9% Similarity=0.151 Sum_probs=46.3
Q ss_pred hcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 047775 159 LARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGK 212 (386)
Q Consensus 159 l~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~ 212 (386)
++.-.+..++.++..--..|.++|.+++.++++..-.-+.++.+.|+++=.++.
T Consensus 281 I~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 281 IKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 344567777777888889999999999999999999999999999999988765
No 129
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.29 E-value=46 Score=25.51 Aligned_cols=30 Identities=17% Similarity=0.193 Sum_probs=24.3
Q ss_pred HHHHHHhccccchHHHHHHHHHhhhceEEE
Q 047775 179 LFIGAFMGQDTLNVAKVVAVLVSMAGVAMT 208 (386)
Q Consensus 179 ~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv 208 (386)
..+|.+.+||+++|..+.|-++...|+.++
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 356788899999999999988877776654
No 130
>PRK15015 carbon starvation protein A; Provisional
Probab=25.10 E-value=3.6e+02 Score=28.45 Aligned_cols=31 Identities=23% Similarity=0.269 Sum_probs=14.9
Q ss_pred cccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEE
Q 047775 172 STSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTT 209 (386)
Q Consensus 172 ~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~ 209 (386)
..-|+.-++++..+.-- -+.+=.++|.++..
T Consensus 98 GAGPivGPvlAa~~Gwl-------P~~LWIl~G~vf~G 128 (701)
T PRK15015 98 GAGPLVGPVLAAQMGYL-------PGMIWLLAGVVLAG 128 (701)
T ss_pred ccCccHHHHHHHHHcch-------HHHHHHHHcceeec
Confidence 34456666665543211 14444455655554
No 131
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=25.06 E-value=51 Score=25.67 Aligned_cols=55 Identities=15% Similarity=0.243 Sum_probs=35.3
Q ss_pred HHHHHHHhhhhHHHH-HHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH
Q 047775 320 FWALCVVWTTPLVAT-LGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIV 374 (386)
Q Consensus 320 l~~~~~~~~~~~~~s-~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~ 374 (386)
+|+.-+++.+-+.+. +.++++..+.++++..+-.|...-..++|..+++.|+.+.
T Consensus 68 ly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 68 LYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 344445555533333 2344554557888887655556778999999999998763
No 132
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=24.71 E-value=25 Score=32.49 Aligned_cols=52 Identities=13% Similarity=0.127 Sum_probs=0.0
Q ss_pred HHHhcccchhhHHHhhcccHHHHHHHHHH-hcccc-chHHHHHHHHHhhhceEE
Q 047775 156 NAALARTSVASTTVLSSTSGLFTLFIGAF-MGQDT-LNVAKVVAVLVSMAGVAM 207 (386)
Q Consensus 156 ~~al~~~~~~~~~~i~~~~p~~~~lls~~-~~~ek-~~~~~~~~v~l~~~Gv~l 207 (386)
|+-++-.+-+..+++.+...+++.++-.+ ++|+| +-....+|+++.++-..+
T Consensus 41 ~iimsd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv 94 (381)
T PF05297_consen 41 FIIMSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLV 94 (381)
T ss_dssp ------------------------------------------------------
T ss_pred HHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHH
Confidence 34455555555566666555444444333 34555 445566666665544333
No 133
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=23.47 E-value=2.6e+02 Score=25.36 Aligned_cols=20 Identities=20% Similarity=-0.210 Sum_probs=9.2
Q ss_pred HHHHHHHHHHhhHHHHHHHH
Q 047775 11 LISAVVIIWVTSAEVTQDIF 30 (386)
Q Consensus 11 ~~l~~~~~w~~~~~~~~~~~ 30 (386)
.+++.+++=+..+.+.-...
T Consensus 14 ~illg~~iGg~~G~~~~~~~ 33 (248)
T PF11368_consen 14 LILLGGLIGGFIGFFIGRIG 33 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34444444444455444444
No 134
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=21.99 E-value=53 Score=27.19 Aligned_cols=27 Identities=26% Similarity=0.443 Sum_probs=18.4
Q ss_pred hcccchhhHHHhhcccHHHHHHHHHHh
Q 047775 159 LARTSVASTTVLSSTSGLFTLFIGAFM 185 (386)
Q Consensus 159 l~~~~~~~~~~i~~~~p~~~~lls~~~ 185 (386)
+.--+.-.++.+.+..|+++++++.++
T Consensus 69 i~EkslL~sA~LvYi~PL~~l~v~~~L 95 (150)
T COG3086 69 IEEKSLLKSALLVYIFPLVGLFLGAIL 95 (150)
T ss_pred cCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455566677777888888877655
No 135
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=21.90 E-value=3.6e+02 Score=27.13 Aligned_cols=25 Identities=4% Similarity=-0.036 Sum_probs=20.0
Q ss_pred chHHHHHHHHHHHHHHHHHhccchh
Q 047775 356 YSAIYILGSAQVFAGFVIVNVSDRL 380 (386)
Q Consensus 356 ~~~~~~~G~~lIi~g~~l~~~~~~~ 380 (386)
++..|++...++++|+++..+.+++
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~~~~ 278 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILAPKG 278 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhcc
Confidence 7889999999999998777654433
No 136
>PF04387 PTPLA: Protein tyrosine phosphatase-like protein, PTPLA; InterPro: IPR007482 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This family includes the mammalian protein tyrosine phosphatase-like protein, PTPLA. A significant variation of PTPLA from other protein tyrosine phosphatases is the presence of proline instead of catalytic arginine at the active site. It is thought that PTPLA proteins have a role in the development, differentiation, and maintenance of a number of tissue types [].
Probab=21.82 E-value=38 Score=28.80 Aligned_cols=45 Identities=24% Similarity=0.422 Sum_probs=37.0
Q ss_pred HHHHHHHHHHhhHHHHHHHHh----cCCCcEEeeeecchhHHHHHHHHHH
Q 047775 11 LISAVVIIWVTSAEVTQDIFS----DYKQPFAVTYLGASLMVVYLPVAFL 56 (386)
Q Consensus 11 ~~l~~~~~w~~~~~~~~~~~~----~~~~P~~~~~~~~~~~~i~lp~~~~ 56 (386)
......+.|+. +++.||.+- .+..|..++|.|.+.|.++.|.-..
T Consensus 49 ~~~~l~~aWsl-~EviRY~yY~~~l~~~~p~~L~WLRYs~FivLYPlG~~ 97 (164)
T PF04387_consen 49 AVPLLLIAWSL-TEVIRYPYYALKLLGIVPYWLTWLRYSAFIVLYPLGIL 97 (164)
T ss_pred chhhHHHHHHh-hhcchhHHHHHHhcCCCchHHHHHHHhhHhhccchHHH
Confidence 45667889999 999999774 2678999999999999999886543
No 137
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=20.20 E-value=1.6e+02 Score=21.40 Aligned_cols=23 Identities=4% Similarity=0.119 Sum_probs=9.6
Q ss_pred HHHHHHHHHHcCCcchHHHHHHH
Q 047775 342 PLAMVADMVIHGRHYSAIYILGS 364 (386)
Q Consensus 342 p~a~i~~~i~~ge~~~~~~~~G~ 364 (386)
.++.+.+++.-+-..+...+.++
T Consensus 22 iisfi~Gy~~q~~~~~~~~~~~g 44 (76)
T PF06645_consen 22 IISFIVGYITQSFSYTFYIYGAG 44 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555543333333333333
Done!