Query         047776
Match_columns 521
No_of_seqs    175 out of 1890
Neff          11.2
Searched_HMMs 46136
Date          Fri Mar 29 03:03:24 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047776.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047776hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 3.4E-86 7.4E-91  633.7  45.7  459   32-520    25-488 (489)
  2 KOG0158 Cytochrome P450 CYP3/C 100.0 4.7E-81   1E-85  588.1  43.7  471   15-520    13-499 (499)
  3 PLN02971 tryptophan N-hydroxyl 100.0 3.2E-80   7E-85  617.4  47.9  474   24-519    48-533 (543)
  4 PLN00168 Cytochrome P450; Prov 100.0 7.6E-80 1.6E-84  613.4  49.6  510    1-520     1-517 (519)
  5 PLN02687 flavonoid 3'-monooxyg 100.0 3.5E-79 7.6E-84  608.3  47.3  491    7-520     8-509 (517)
  6 PLN03112 cytochrome P450 famil 100.0 3.1E-78 6.8E-83  602.9  50.0  488   12-520    11-508 (514)
  7 PLN00110 flavonoid 3',5'-hydro 100.0 3.2E-78 6.9E-83  597.6  47.1  488    7-520     7-497 (504)
  8 PLN03234 cytochrome P450 83B1; 100.0 1.3E-77 2.9E-82  596.7  47.4  465   31-519    26-498 (499)
  9 PLN02183 ferulate 5-hydroxylas 100.0 3.1E-77 6.8E-82  594.2  47.0  465   31-519    34-511 (516)
 10 PTZ00404 cytochrome P450; Prov 100.0 2.5E-77 5.4E-82  592.1  45.9  475    1-519     1-482 (482)
 11 PLN02966 cytochrome P450 83A1  100.0 4.1E-77 8.8E-82  592.0  46.8  493    1-521     1-501 (502)
 12 PLN02394 trans-cinnamate 4-mon 100.0 1.7E-76 3.7E-81  589.4  48.0  467   31-520    28-502 (503)
 13 PLN02655 ent-kaurene oxidase   100.0   2E-75 4.3E-80  574.4  42.8  454   35-521     1-465 (466)
 14 KOG0157 Cytochrome P450 CYP4/C 100.0 3.2E-76 6.8E-81  578.0  36.4  458   31-521    33-497 (497)
 15 PLN02290 cytokinin trans-hydro 100.0 1.4E-75 3.1E-80  584.1  41.7  459   27-520    36-515 (516)
 16 KOG0159 Cytochrome P450 CYP11/ 100.0 2.7E-75 5.8E-80  535.3  39.7  459   31-520    48-518 (519)
 17 PLN02500 cytochrome P450 90B1  100.0 9.7E-75 2.1E-79  573.8  43.6  449   29-518    34-488 (490)
 18 PLN03018 homomethionine N-hydr 100.0 1.3E-73 2.9E-78  565.2  49.3  470   33-520    40-524 (534)
 19 PLN02169 fatty acid (omega-1)- 100.0 1.3E-73 2.9E-78  563.4  43.3  472    6-519    11-499 (500)
 20 PF00067 p450:  Cytochrome P450 100.0 4.4E-74 9.6E-79  572.1  32.9  455   35-516     1-463 (463)
 21 PLN02774 brassinosteroid-6-oxi 100.0 1.6E-72 3.5E-77  553.3  41.7  431   32-518    30-462 (463)
 22 PLN03195 fatty acid omega-hydr 100.0 3.5E-72 7.5E-77  559.2  40.8  457   34-520    31-516 (516)
 23 PLN02738 carotene beta-ring hy 100.0 1.2E-71 2.5E-76  556.8  41.9  449   45-521   143-596 (633)
 24 PLN03141 3-epi-6-deoxocathaste 100.0 1.6E-71 3.5E-76  545.0  41.6  444   29-521     3-451 (452)
 25 PLN02196 abscisic acid 8'-hydr 100.0 3.6E-71 7.8E-76  543.2  41.3  436   23-519    25-462 (463)
 26 PLN02987 Cytochrome P450, fami 100.0 1.2E-69 2.5E-74  530.2  43.6  441   29-520    26-469 (472)
 27 PLN02936 epsilon-ring hydroxyl 100.0 5.7E-70 1.2E-74  537.9  40.9  461   33-520    12-482 (489)
 28 PLN02302 ent-kaurenoic acid ox 100.0 2.9E-69 6.4E-74  537.4  44.9  443   30-520    39-488 (490)
 29 KOG0684 Cytochrome P450 [Secon 100.0 6.8E-70 1.5E-74  486.8  33.6  449   33-521    31-486 (486)
 30 PLN02426 cytochrome P450, fami 100.0 4.4E-67 9.6E-72  516.1  42.2  439   41-520    49-500 (502)
 31 PLN02648 allene oxide synthase 100.0 2.1E-60 4.5E-65  461.0  31.6  425   29-494    13-463 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 6.3E-54 1.4E-58  411.4  32.7  381   57-519    24-410 (411)
 33 PF12554 MOZART1:  Mitotic-spin  74.4      10 0.00022   23.6   4.3   44  304-347     5-48  (48)
 34 PF12273 RCR:  Chitin synthesis  62.7       9 0.00019   30.2   3.2   25    3-27      4-28  (130)
 35 KOG3653 Transforming growth fa  61.5      25 0.00055   34.1   6.3   39   67-105   222-260 (534)
 36 PF15183 MRAP:  Melanocortin-2   60.2      30 0.00065   24.2   4.8   22    2-23     41-62  (90)
 37 PF11044 TMEMspv1-c74-12:  Plec  58.8      23 0.00051   21.2   3.5   19    1-19      1-19  (49)
 38 PF12508 DUF3714:  Protein of u  57.7     3.1 6.6E-05   35.4  -0.3   43  366-410    52-94  (200)
 39 PRK06789 flagellar motor switc  48.7      26 0.00055   24.3   3.1   42  371-412    20-63  (74)
 40 PF15050 SCIMP:  SCIMP protein   46.2      38 0.00083   25.6   3.8   12    3-14      8-19  (133)
 41 PF11446 DUF2897:  Protein of u  43.3      40 0.00087   21.8   3.2   25    2-26      4-28  (55)
 42 PHA03049 IMV membrane protein;  42.2      71  0.0015   21.3   4.1   17   30-46     28-44  (68)
 43 COG1759 5-formaminoimidazole-4  40.1      45 0.00097   30.6   4.1   70  370-480   276-352 (361)
 44 PF05952 ComX:  Bacillus compet  37.6      28 0.00061   22.6   1.8   25  327-351     4-28  (57)
 45 PF05393 Hum_adeno_E3A:  Human   36.8 1.1E+02  0.0023   21.9   4.6   18    9-26     43-60  (94)
 46 COG3423 Nlp Predicted transcri  35.5     2.6 5.7E-05   28.7  -3.1   28  401-437    45-72  (82)
 47 KOG3506 40S ribosomal protein   33.8      19  0.0004   22.9   0.6   11  456-466    12-22  (56)
 48 TIGR03779 Bac_Flav_CT_M Bacter  32.6      14  0.0003   35.4  -0.2   44  366-411   255-298 (410)
 49 PF05084 GRA6:  Granule antigen  32.1      93   0.002   25.0   4.2    7   33-39    177-183 (215)
 50 PF09201 SRX:  SRX;  InterPro:   29.7      53  0.0011   25.8   2.5   22  464-485    19-40  (148)
 51 PF13625 Helicase_C_3:  Helicas  29.5      95   0.002   24.4   4.1   39   55-95     74-112 (129)
 52 PF07849 DUF1641:  Protein of u  25.4      70  0.0015   19.3   2.1   18  326-343    13-30  (42)
 53 PRK11677 hypothetical protein;  25.0 1.1E+02  0.0023   24.3   3.5   20    4-23      3-22  (134)
 54 PF14129 DUF4296:  Domain of un  24.9 2.5E+02  0.0054   20.1   5.3   50  301-350    29-78  (87)
 55 PHA01346 hypothetical protein   24.6      62  0.0013   19.2   1.6   17  334-350    28-45  (53)
 56 PF12444 Sox_N:  Sox developmen  24.4      60  0.0013   23.2   1.9   22  472-493    59-80  (84)
 57 PF13893 RRM_5:  RNA recognitio  24.1   2E+02  0.0042   18.2   5.0   35   61-95      1-39  (56)
 58 KOG0114 Predicted RNA-binding   23.3 1.2E+02  0.0026   22.6   3.2   60   30-94      9-74  (124)
 59 COG2991 Uncharacterized protei  23.1 1.5E+02  0.0032   20.3   3.3   25    1-25      1-25  (77)
 60 PF05568 ASFV_J13L:  African sw  22.9      98  0.0021   24.3   2.9   19    6-24     34-52  (189)
 61 COG0851 MinE Septum formation   22.9 1.9E+02  0.0042   20.8   4.1   42  311-352     4-52  (88)
 62 PF08492 SRP72:  SRP72 RNA-bind  22.5      58  0.0013   21.4   1.4    8  430-437    44-51  (59)
 63 TIGR02736 cbb3_Q_epsi cytochro  22.3 1.5E+02  0.0033   19.1   3.1   12   17-28     15-26  (56)
 64 PRK05933 type III secretion sy  21.4 1.1E+02  0.0024   28.2   3.3   45  368-412   316-363 (372)
 65 PF09105 SelB-wing_1:  Elongati  21.4 1.3E+02  0.0029   18.4   2.6   20  301-320    29-48  (61)
 66 PF06576 DUF1133:  Protein of u  21.2 3.9E+02  0.0084   22.2   5.9   46  335-384    74-119 (176)
 67 PF10717 ODV-E18:  Occlusion-de  20.8 2.8E+02  0.0061   19.7   4.4   20    5-24     28-47  (85)
 68 TIGR02976 phageshock_pspB phag  20.4 1.4E+02  0.0031   20.8   3.0    9   16-24     19-27  (75)
 69 PF05545 FixQ:  Cbb3-type cytoc  20.2   2E+02  0.0044   17.8   3.5   13   15-27     21-33  (49)
 70 KOG0149 Predicted RNA-binding   20.1 1.1E+02  0.0024   26.7   3.0   49   43-96     16-73  (247)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.4e-86  Score=633.72  Aligned_cols=459  Identities=34%  Similarity=0.582  Sum_probs=398.6

Q ss_pred             CCCCCCCCCCCcccchhhhhhcCCCchHHHHHHHHhcCCeEEEEeCCccEEEecCHHHHHHHHHhCCccccCCCCCccce
Q 047776           32 YKLPPGPWNFPIIGNILLARKSVLDLEPMIHDLHKKFGPATTLHIGFRPVIFICDRSLAHQALIQNGAVFSGRPPAGAVV  111 (521)
Q Consensus        32 ~~~~Pgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dpe~i~~v~~~~~~~f~~~~~~~~~~  111 (521)
                      .+.||||+++|++||++++...  .++..+.+|.++|||+|++++|+.++|||+|++.++|++++++..|+.|+......
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~--~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~  102 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSL--PPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATL  102 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCC--chhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhH
Confidence            7899999999999999999532  58999999999999999999999999999999999999999999999999732244


Q ss_pred             eeeccCCcceeccCCChhHHHHHHHHHhhhcChhhHhhhHHHHHHHHHHHHHHHHHhhcccCCCCCcccchHHHHHHHHH
Q 047776          112 KITSANQHNINSASYGPNWRLLRRNLISEIIHPSRLKSYSHARKWVLQILIDGLNLQAVNNGDRDDRAVKLRDHIQFAMF  191 (521)
Q Consensus       112 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~  191 (521)
                      ..+..++.+++++.+|+.|+.+||.....+++...++++.....++++.+++.+.+ ..     .+.+||+...+..++.
T Consensus       103 ~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~-----~~~~vdl~~~l~~~~~  176 (489)
T KOG0156|consen  103 KYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SK-----KGEPVDLSELLDLLVG  176 (489)
T ss_pred             HHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cC-----CCceeeHHHHHHHHHH
Confidence            56666677999999999999999999999999999999988889999999999987 22     1379999999999999


Q ss_pred             HHHHHhhhcCcCCh---HhHHHHHHHHHHHHHhccccccccccc-hhhhhhhh-hhhHHHHHHHHHHHHHHHHHHHHHHH
Q 047776          192 CLLVLMCFGDKLDE---KKIREVEDVQRLMMLNTRRFNVLNFWP-RVTKFVLR-KLWGEFFEILKKQESVLLPLIRDRRR  266 (521)
Q Consensus       192 ~~~~~~~fG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~  266 (521)
                      ++|++++||.+++.   +....+.++..........+...+++| ++...... ...+.......++..+++++|+++++
T Consensus       177 nvI~~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~  256 (489)
T KOG0156|consen  177 NVICRMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHRE  256 (489)
T ss_pred             HHHHHHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999964   444558888888888888888888888 44443211 23444555555689999999999887


Q ss_pred             HHHhcccccccchhhhhhhHHHHHhcCCCccCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcCChHHHHHHHHH
Q 047776          267 MKEEGLSQAKEDENYVLAYVDTLFDLHLPEENRKLQENEIMSLCSEFLVAGTDTTSNALQWVMANLVKYPDIQEKVFKEI  346 (521)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~klr~Ei  346 (521)
                      .. +   . + ++   .|++|.+++...+++...+|++++...+.++++||+|||++++.|++.+|++||++|+|+|+||
T Consensus       257 ~~-~---~-~-~~---~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEI  327 (489)
T KOG0156|consen  257 KI-G---D-E-EG---RDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEI  327 (489)
T ss_pred             hh-c---c-C-CC---CcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            65 2   1 1 11   5899999988764333339999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCccccccchhhhccChhhHHHHHhhhcCCCCCcccCccccccceeeccEEecCCcEEEEcccccccCCCCCCCCC
Q 047776          347 KGVVGDEEIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMVLNGFYFPKNAIINFMVAEMGCWDSEVWDDP  426 (521)
Q Consensus       347 ~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~~d~~~~~~p  426 (521)
                      ++++|.+  +.++.+|+.+||||+|+|+|++|++|++|+.++|.+.+|+.|+||.|||||.|+++.|++| |||++|+||
T Consensus       328 d~vvG~~--r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~-rDp~vw~dP  404 (489)
T KOG0156|consen  328 DEVVGKG--RLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIH-RDPKVWEDP  404 (489)
T ss_pred             HHHhCCC--CCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhh-cCCccCCCc
Confidence            9999987  6699999999999999999999999999999999999999999999999999999999999 999999999


Q ss_pred             CCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHHccEEEecCCCCCccccccccee
Q 047776          427 TSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYFVANLIWHYEWKAVDGDEVDFEEKQEFTK  506 (521)
Q Consensus       427 ~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~  506 (521)
                      ++|+||||++.+       +... ....++|||.|+|+|||..+|.+|+.++++.|+++|++.+..+ .++.... +.+.
T Consensus       405 ~eF~PERFl~~~-------d~~~-~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-~~d~~e~-~~~~  474 (489)
T KOG0156|consen  405 EEFKPERFLDSN-------DGKG-LDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-KVDMEEA-GLTL  474 (489)
T ss_pred             cccChhhhcCCc-------cccC-CceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC-CCCCccc-ccce
Confidence            999999999872       0112 3578999999999999999999999999999999999999987 6666665 4777


Q ss_pred             cccCCeeEEeecCC
Q 047776          507 VMKTPLKAHIHPRS  520 (521)
Q Consensus       507 ~~~~~~~v~~~~r~  520 (521)
                      ..++|+.+...+|.
T Consensus       475 ~~~~pl~~~~~~r~  488 (489)
T KOG0156|consen  475 KKKKPLKAVPVPRL  488 (489)
T ss_pred             ecCCcceeeeecCC
Confidence            88889999888875


No 2  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=4.7e-81  Score=588.12  Aligned_cols=471  Identities=25%  Similarity=0.386  Sum_probs=360.6

Q ss_pred             HHHHHHHHHhccCCCCCCCCCCCCCCCCcccchhhhhhcCCCchHHHHHHHHhcCCeEEEEeCCccEEEecCHHHHHHHH
Q 047776           15 ALIKAFIHLLRPSKYFNYKLPPGPWNFPIIGNILLARKSVLDLEPMIHDLHKKFGPATTLHIGFRPVIFICDRSLAHQAL   94 (521)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~Pgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dpe~i~~v~   94 (521)
                      +.+++|+++.+...++..+-+|||+++|++||+..+...... .....+.+.+|||+++++.+.++.++|+|||.|++|+
T Consensus        13 l~~l~y~~~~~~~~yw~rrGi~~~~p~p~~Gn~~~~~~~~~~-~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~   91 (499)
T KOG0158|consen   13 LLVLLYLWLRWTYSYWRRRGIPGPKPLPFLGNLPGMLKRERP-GDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEIL   91 (499)
T ss_pred             HHHHHHHHHHhhhhhhccCCCCCCCCCCcEecHHHHHhccCc-HHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHH
Confidence            334445555555556677789999999999999998753333 4444454555599999999999999999999999999


Q ss_pred             HhCCccccCC--CCCccceeeeccCCcceeccCCChhHHHHHHHHHhhhcChhhHhhhHHHHHHHHHHHHHHHHHhhccc
Q 047776           95 IQNGAVFSGR--PPAGAVVKITSANQHNINSASYGPNWRLLRRNLISEIIHPSRLKSYSHARKWVLQILIDGLNLQAVNN  172 (521)
Q Consensus        95 ~~~~~~f~~~--~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~  172 (521)
                      +++.++|..+  +....-..-++   ..-++...|++||++|..+. |.|+..+++.|.+.+.++++++++.+.++..  
T Consensus        92 ik~F~~F~~r~~~~~~d~~~~l~---~~~Lf~~~g~~WK~lR~~ls-P~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~--  165 (499)
T KOG0158|consen   92 IKDFDNFYNRKRPIYGDPEDPLS---ALNLFFLRGERWKRLRTKLS-PTFTSGKLKKMFPTMEEVGDELVRHLRRKSE--  165 (499)
T ss_pred             HHhCccCcCCCCCCcCCCCCccc---ccCchhccCchHHHHHHhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhc--
Confidence            9999999994  33322221111   12234458999999999988 9999999999999999999999999998654  


Q ss_pred             CCCCCcccchHHHHHHHHHHHHHHhhhcCcCChHh--HHHHHHHHHHHHHh-ccccc----cccccchhhhhhhhhhhHH
Q 047776          173 GDRDDRAVKLRDHIQFAMFCLLVLMCFGDKLDEKK--IREVEDVQRLMMLN-TRRFN----VLNFWPRVTKFVLRKLWGE  245 (521)
Q Consensus       173 ~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~--~~~~~~~~~~~~~~-~~~~~----~~~~~p~l~~~~~~~~~~~  245 (521)
                         .+..+++.+.+.+++.|||++++||.+.+.-.  ...+.......... ...+.    ....+|.+...+..     
T Consensus       166 ---~~~~~~~~dl~~~yT~DVI~~~AfG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l~~-----  237 (499)
T KOG0158|consen  166 ---GGQEGEIKDLCARYTTDVIGSCAFGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPLRV-----  237 (499)
T ss_pred             ---ccCCccHHHHHHHHHHHHHhHhhcccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhhhc-----
Confidence               23578999999999999999999998874221  11222222222221 11111    12223333322111     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhhhhhHHHHHhcCCCc----cCC-CCCHHHHHHHHHHHhhhcccc
Q 047776          246 FFEILKKQESVLLPLIRDRRRMKEEGLSQAKEDENYVLAYVDTLFDLHLPE----ENR-KLQENEIMSLCSEFLVAGTDT  320 (521)
Q Consensus       246 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~----~~~-~ls~~~i~~~~~~~~~ag~~t  320 (521)
                       ........+++.+++.++.+..+.       ......|+++.+++++..+    +.. .+|.+||+++++.+++||.||
T Consensus       238 -~~~~~~~~~~~~~~v~~~v~~R~~-------~~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeT  309 (499)
T KOG0158|consen  238 -KLFPEDVTDFFRKLVNSRVEQREK-------ENIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFET  309 (499)
T ss_pred             -ccChHHHHHHHHHHHHHHHHHHHh-------cCCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHh
Confidence             111223334444444444443322       1133449999999887531    112 599999999999999999999


Q ss_pred             hHHHHHHHHHHHhcCChHHHHHHHHHhhhcCCccccccchhhhccChhhHHHHHhhhcCCCCCcccCccccccceeec-c
Q 047776          321 TSNALQWVMANLVKYPDIQEKVFKEIKGVVGDEEIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMVLN-G  399 (521)
Q Consensus       321 t~~~l~~~l~~L~~~p~~q~klr~Ei~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~-g  399 (521)
                      ||++|++++|+||.||++|+|||+||+++..+..  .+++|.+.+|+||++||+||||+||++|. +.|.|.+|++++ +
T Consensus       310 ts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~--~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~~~i~~~  386 (499)
T KOG0158|consen  310 TASTLSFALYELAKNPDVQDKLREEIDEVLEEKE--GLTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKDYEIPGG  386 (499)
T ss_pred             HHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccC--CCCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCceecCCC
Confidence            9999999999999999999999999999987753  39999999999999999999999999996 789999999999 9


Q ss_pred             EEecCCcEEEEcccccccCCCCCCCCCCCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHHHHHHHH
Q 047776          400 FYFPKNAIINFMVAEMGCWDSEVWDDPTSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYFV  479 (521)
Q Consensus       400 ~~ip~g~~v~~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l  479 (521)
                      +.||||+.|.++.|++| |||++||||++|+||||++++.        ...++.+|+|||.|||.|+|++||.+|+|+.|
T Consensus       387 ~~i~kG~~V~Ip~~alH-~Dp~~~p~Pe~F~PERF~~~~~--------~~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L  457 (499)
T KOG0158|consen  387 FVIPKGTPVMIPTYALH-HDPEYWPEPEKFKPERFEEENN--------KSRHPGAYLPFGVGPRNCIGMRFALMEAKLAL  457 (499)
T ss_pred             eEeCCCCEEEeeccccc-CCcccCCCcccCCCccCCCCcc--------cccCCccccCCCCCccccHHHHHHHHHHHHHH
Confidence            99999999999999999 9999999999999999998732        12346899999999999999999999999999


Q ss_pred             HHHHHccEEEecCCCCCccc-ccccceecccCCeeEEeecCC
Q 047776          480 ANLIWHYEWKAVDGDEVDFE-EKQEFTKVMKTPLKAHIHPRS  520 (521)
Q Consensus       480 ~~ll~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~r~  520 (521)
                      ++||++|+++.++...+... ...++++.|++|+++++++|.
T Consensus       458 ~~lL~~f~~~~~~~t~~~~~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  458 AHLLRNFSFEVCPTTIIPLEGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             HHHHhhCEEecCCcccCcccCCccceeeecCCceEEEEEeCC
Confidence            99999999999983322211 122677899999999999984


No 3  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=3.2e-80  Score=617.45  Aligned_cols=474  Identities=26%  Similarity=0.395  Sum_probs=370.6

Q ss_pred             hccCCCCCCCCCCCCCCCCcccchhhhhhcCCCchHHHHHHHHhcC-CeEEEEeCCccEEEecCHHHHHHHHHhCCcccc
Q 047776           24 LRPSKYFNYKLPPGPWNFPIIGNILLARKSVLDLEPMIHDLHKKFG-PATTLHIGFRPVIFICDRSLAHQALIQNGAVFS  102 (521)
Q Consensus        24 ~~~~~~~~~~~~Pgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~vvv~dpe~i~~v~~~~~~~f~  102 (521)
                      .+.++.++.+.||||+++|++||++.+..+ ...+.++.+|.++|| ++|++++|+.++|+|+||+.+++|+.+++..|+
T Consensus        48 ~~~~~~r~~~lPPGP~~lPiiGnl~~l~~~-~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~  126 (543)
T PLN02971         48 SSSRNKKLHPLPPGPTGFPIVGMIPAMLKN-RPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFA  126 (543)
T ss_pred             hhcccCCCCCCCcCCCCCCcccchHHhccC-CcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhc
Confidence            333334467899999999999999887432 224678999999999 899999999999999999999999999888999


Q ss_pred             CCCCCccceeeeccCCcceeccCCChhHHHHHHHHHhhhcChhhHhhhHHHHHHHHHHHHHHHHHhhcccCCCCCcccch
Q 047776          103 GRPPAGAVVKITSANQHNINSASYGPNWRLLRRNLISEIIHPSRLKSYSHARKWVLQILIDGLNLQAVNNGDRDDRAVKL  182 (521)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl  182 (521)
                      .++... ....++.+..++++..+|+.|+.+||.+.++++++..++.+.+.+.++++.+++.+.+...     ++.++|+
T Consensus       127 ~rp~~~-~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-----~~~~vd~  200 (543)
T PLN02971        127 SRPLTY-AQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVK-----NSEPVDL  200 (543)
T ss_pred             CCCccc-chhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhcc-----CCCceeh
Confidence            987643 3344554333456667899999999999867787777778888888888888888765433     2567999


Q ss_pred             HHHHHHHHHHHHHHhhhcCcCCh-------HhHHHHHHHHHHHHHhcc---ccccccccchhhhhhhhhhhHHHHHHHHH
Q 047776          183 RDHIQFAMFCLLVLMCFGDKLDE-------KKIREVEDVQRLMMLNTR---RFNVLNFWPRVTKFVLRKLWGEFFEILKK  252 (521)
Q Consensus       183 ~~~~~~~~~~~~~~~~fG~~~~~-------~~~~~~~~~~~~~~~~~~---~~~~~~~~p~l~~~~~~~~~~~~~~~~~~  252 (521)
                      .+.+.++++++++.++||.++..       +...........+.....   ...+..++|++.++......+...+..+.
T Consensus       201 ~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~  280 (543)
T PLN02971        201 RFVTRHYCGNAIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAI  280 (543)
T ss_pred             HHHHHHHHHHHHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHH
Confidence            99999999999999999988621       111112222222222111   11233556665443221223344445667


Q ss_pred             HHHHHHHHHHHHHHHHHhcccccccchhhhhhhHHHHHhcCCCccCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHH
Q 047776          253 QESVLLPLIRDRRRMKEEGLSQAKEDENYVLAYVDTLFDLHLPEENRKLQENEIMSLCSEFLVAGTDTTSNALQWVMANL  332 (521)
Q Consensus       253 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L  332 (521)
                      +.+++.++++++++..+.+    .  .....|+++.+++...++....++++++.+++.++++||+|||+++++|++++|
T Consensus       281 ~~~~~~~~i~~~~~~~~~~----~--~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~L  354 (543)
T PLN02971        281 MDKYHDPIIDERIKMWREG----K--RTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEM  354 (543)
T ss_pred             HHHHHHHHHHHHHHHHhcc----C--CCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHH
Confidence            7888888888876543221    0  011248999999865321123599999999999999999999999999999999


Q ss_pred             hcCChHHHHHHHHHhhhcCCccccccchhhhccChhhHHHHHhhhcCCCCCcccCccccccceeeccEEecCCcEEEEcc
Q 047776          333 VKYPDIQEKVFKEIKGVVGDEEIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMVLNGFYFPKNAIINFMV  412 (521)
Q Consensus       333 ~~~p~~q~klr~Ei~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~  412 (521)
                      +.||++|+|+|+||+++++++  +.++++++++|||++|||+|+||++|++|..++|.+.+|++++||.||||+.|+++.
T Consensus       355 a~~Pevq~kl~~EI~~v~g~~--~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~  432 (543)
T PLN02971        355 INKPEILHKAMEEIDRVVGKE--RFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSR  432 (543)
T ss_pred             HhCHHHHHHHHHHHHHHhCCC--CCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECc
Confidence            999999999999999999865  779999999999999999999999999998789999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHHccEEEecC
Q 047776          413 AEMGCWDSEVWDDPTSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYFVANLIWHYEWKAVD  492 (521)
Q Consensus       413 ~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~  492 (521)
                      |++| |||++|+||++|+||||++++++  .   ....++..++|||+|+|.|+|++||+.|+++++++||++|++++.+
T Consensus       433 ~~~~-~d~~~~~dP~~F~PeRfl~~~~~--~---~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~  506 (543)
T PLN02971        433 YGLG-RNPKVWSDPLSFKPERHLNECSE--V---TLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAG  506 (543)
T ss_pred             HHhc-CChhhCCCccccCcccCCCCCcc--c---cccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCC
Confidence            9999 99999999999999999975221  0   0012246799999999999999999999999999999999999876


Q ss_pred             CC-CCcccccccceecccCCeeEEeecC
Q 047776          493 GD-EVDFEEKQEFTKVMKTPLKAHIHPR  519 (521)
Q Consensus       493 ~~-~~~~~~~~~~~~~~~~~~~v~~~~r  519 (521)
                      +. .+++.+..+ ++..++++.|.+++|
T Consensus       507 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~  533 (543)
T PLN02971        507 SETRVELMESSH-DMFLSKPLVMVGELR  533 (543)
T ss_pred             CCCCcchhhhcC-cccccccceeeeeec
Confidence            54 555656555 666688999999998


No 4  
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=7.6e-80  Score=613.44  Aligned_cols=510  Identities=46%  Similarity=0.850  Sum_probs=389.9

Q ss_pred             CchHHHH--HHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCcccchhhhhhcCCCchHHHHHHHHhcCCeEEEEeCC
Q 047776            1 METWSVI--LISLCISALIKAFIHLLRPSKYFNYKLPPGPWNFPIIGNILLARKSVLDLEPMIHDLHKKFGPATTLHIGF   78 (521)
Q Consensus         1 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~   78 (521)
                      |+.|.++  .+++++.++++++.........+..+.||||+++|++||++.+.....+++..+.+|+++||++|++++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~   80 (519)
T PLN00168          1 MDATQLLLLAALLLLPLLLLLLGKHGGRGGKKGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGS   80 (519)
T ss_pred             CcHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCC
Confidence            4444443  33333333334444444444455667899999999999998664333457889999999999999999999


Q ss_pred             ccEEEecCHHHHHHHHHhCCccccCCCCCccceeeeccCCcceeccCCChhHHHHHHHHHhhhcChhhHhhhHHHHHHHH
Q 047776           79 RPVIFICDRSLAHQALIQNGAVFSGRPPAGAVVKITSANQHNINSASYGPNWRLLRRNLISEIIHPSRLKSYSHARKWVL  158 (521)
Q Consensus        79 ~~~vvv~dpe~i~~v~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~  158 (521)
                      .++++++||+++++++.++...|+.++... ...+++.+...+.+..+|+.|+++||.+..+.|++++++.+.+.+.+++
T Consensus        81 ~~~vvv~dpe~~~~il~~~~~~f~~rp~~~-~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~  159 (519)
T PLN00168         81 RLSVFVADRRLAHAALVERGAALADRPAVA-SSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVR  159 (519)
T ss_pred             ccEEEECCHHHHHHHHHhcCCccccCCccc-chhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence            999999999999999998888898877543 2234443322333345899999999866669999999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCCcccchHHHHHHHHHHHHHHhhhcCcCChHhHHHHHHHHHHHHHhc-cccccccccchhhhh
Q 047776          159 QILIDGLNLQAVNNGDRDDRAVKLRDHIQFAMFCLLVLMCFGDKLDEKKIREVEDVQRLMMLNT-RRFNVLNFWPRVTKF  237 (521)
Q Consensus       159 ~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~l~~~  237 (521)
                      +.+++.+.+...     .+..+|+.+.+..++.++++.++||.+++++....+........... ....+..++|++.+.
T Consensus       160 ~~l~~~l~~~~~-----~~~~v~~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~  234 (519)
T PLN00168        160 RVLVDKLRREAE-----DAAAPRVVETFQYAMFCLLVLMCFGERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKH  234 (519)
T ss_pred             HHHHHHHHHhcC-----CCCCcCHHHHHHHHHHHHHHHHHcCCCcChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhh
Confidence            999999976433     24568999999999999999999999986544333433333322111 112344556765443


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--c-cchhhhhhhHHHHHhcCCCc-cCCCCCHHHHHHHHHHH
Q 047776          238 VLRKLWGEFFEILKKQESVLLPLIRDRRRMKEEGLSQA--K-EDENYVLAYVDTLFDLHLPE-ENRKLQENEIMSLCSEF  313 (521)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~-~~~~~~~~~l~~ll~~~~~~-~~~~ls~~~i~~~~~~~  313 (521)
                      .....+++..+..+.+.+++.++++++++..+......  . .......|+++.+++....+ .+..++++++.+++.++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l  314 (519)
T PLN00168        235 LFRGRLQKALALRRRQKELFVPLIDARREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEF  314 (519)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHH
Confidence            33334555667788888899999988776432100000  0 00011348999998765322 23469999999999999


Q ss_pred             hhhcccchHHHHHHHHHHHhcCChHHHHHHHHHhhhcCCccccccchhhhccChhhHHHHHhhhcCCCCCcccCcccccc
Q 047776          314 LVAGTDTTSNALQWVMANLVKYPDIQEKVFKEIKGVVGDEEIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQ  393 (521)
Q Consensus       314 ~~ag~~tt~~~l~~~l~~L~~~p~~q~klr~Ei~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~  393 (521)
                      ++||+|||+++++|++++|++||++|+|+++||+++++++. +.++.+++++||||+|||+||||++|+++..++|.+.+
T Consensus       315 ~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~  393 (519)
T PLN00168        315 LNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQ-EEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAE  393 (519)
T ss_pred             HHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCC-CCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCC
Confidence            99999999999999999999999999999999999997532 56899999999999999999999999999878999999


Q ss_pred             ceeeccEEecCCcEEEEcccccccCCCCCCCCCCCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHH
Q 047776          394 DMVLNGFYFPKNAIINFMVAEMGCWDSEVWDDPTSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAML  473 (521)
Q Consensus       394 d~~i~g~~ip~g~~v~~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~  473 (521)
                      |++++||.||||+.|.++.|++| |||++||||++|+||||++...+...  .....++..++|||+|+|+|+|++||++
T Consensus       394 d~~~~g~~IpkGt~v~~~~~~~~-~d~~~~~~p~~F~PeRf~~~~~~~~~--~~~~~~~~~~~pFG~G~R~C~G~~lA~~  470 (519)
T PLN00168        394 DMEVGGYLIPKGATVNFMVAEMG-RDEREWERPMEFVPERFLAGGDGEGV--DVTGSREIRMMPFGVGRRICAGLGIAML  470 (519)
T ss_pred             CccCCCEEECCCCEEEEChHHHh-cCccccCCccccCcccCCCCCCCccc--cccccCCcceeCCCCCCCCCCcHHHHHH
Confidence            99999999999999999999999 99999999999999999975210000  0111224579999999999999999999


Q ss_pred             HHHHHHHHHHHccEEEecCCCCCcccccccceecccCCeeEEeecCC
Q 047776          474 HLEYFVANLIWHYEWKAVDGDEVDFEEKQEFTKVMKTPLKAHIHPRS  520 (521)
Q Consensus       474 e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  520 (521)
                      |+++++++||++|+|++.++.+++.....+++..++++++|++++|+
T Consensus       471 e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~  517 (519)
T PLN00168        471 HLEYFVANMVREFEWKEVPGDEVDFAEKREFTTVMAKPLRARLVPRR  517 (519)
T ss_pred             HHHHHHHHHHHHccceeCCCCcCChhhhceeEEeecCCcEEEEEecc
Confidence            99999999999999999876554443334567778889999999996


No 5  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=3.5e-79  Score=608.35  Aligned_cols=491  Identities=30%  Similarity=0.518  Sum_probs=383.2

Q ss_pred             HHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCcccchhhhhhcCCCchHHHHHHHHhcCCeEEEEeCCccEEEecC
Q 047776            7 ILISLCISALIKAFIHLLRPSKYFNYKLPPGPWNFPIIGNILLARKSVLDLEPMIHDLHKKFGPATTLHIGFRPVIFICD   86 (521)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d   86 (521)
                      ++.+++++++...+++...+.++++.+.||||+++|++||++.+.   .+++.++.+|+++||++|++++|+.++++++|
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~~---~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~   84 (517)
T PLN02687          8 LLGTVAVSVLVWCLLLRRGGSGKHKRPLPPGPRGWPVLGNLPQLG---PKPHHTMAALAKTYGPLFRLRFGFVDVVVAAS   84 (517)
T ss_pred             HHHHHHHHHHHHHHHhccccCCCCCCCCCccCCCCCccccHHhcC---CchhHHHHHHHHHhCCeeEEecCCceEEEeCC
Confidence            334444444444444445555566777899999999999998873   35788999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCccccCCCCCccceeeeccCCcceeccCCChhHHHHHHHHHhhhcChhhHhhhHHHHHHHHHHHHHHHH
Q 047776           87 RSLAHQALIQNGAVFSGRPPAGAVVKITSANQHNINSASYGPNWRLLRRNLISEIIHPSRLKSYSHARKWVLQILIDGLN  166 (521)
Q Consensus        87 pe~i~~v~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~  166 (521)
                      |+++++++.++...|++++..... ..++....+.+++.+|+.|+++|+.+.++.|+.++++.+.+.+.++++.+++.+.
T Consensus        85 p~~~~~il~~~~~~f~~r~~~~~~-~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~  163 (517)
T PLN02687         85 ASVAAQFLRTHDANFSNRPPNSGA-EHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELA  163 (517)
T ss_pred             HHHHHHHHHhcchhhhcCCCccch-hhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHH
Confidence            999999998888889887754322 2233222355566689999999999876789999999999999999999999997


Q ss_pred             HhhcccCCCCCcccchHHHHHHHHHHHHHHhhhcCcCC----hHhHHHHHHHHHHHHHhccccccccccchhhhhhhhhh
Q 047776          167 LQAVNNGDRDDRAVKLRDHIQFAMFCLLVLMCFGDKLD----EKKIREVEDVQRLMMLNTRRFNVLNFWPRVTKFVLRKL  242 (521)
Q Consensus       167 ~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~  242 (521)
                      +..      ++.++|+.+.++.+++|+++.++||.++.    ++....+.+....+...........++|++.++.....
T Consensus       164 ~~~------~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~  237 (517)
T PLN02687        164 RQH------GTAPVNLGQLVNVCTTNALGRAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGV  237 (517)
T ss_pred             Hhc------CCCceeHHHHHHHHHHHHHHHHHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccH
Confidence            642      25689999999999999999999998862    22234455555544443322223345665443222222


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhhhhhHHHHHhcCCCc----cCCCCCHHHHHHHHHHHhhhcc
Q 047776          243 WGEFFEILKKQESVLLPLIRDRRRMKEEGLSQAKEDENYVLAYVDTLFDLHLPE----ENRKLQENEIMSLCSEFLVAGT  318 (521)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~----~~~~ls~~~i~~~~~~~~~ag~  318 (521)
                      .++..+..+.+.+++.++++++++..+.       ......|+++.+++...++    ++..++++++.+++.++++||+
T Consensus       238 ~~~~~~~~~~~~~~~~~~i~~r~~~~~~-------~~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~  310 (517)
T PLN02687        238 VGKMKRLHRRFDAMMNGIIEEHKAAGQT-------GSEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGT  310 (517)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccc-------cCcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhcccc
Confidence            3455566777888888888877654321       0112348999999765421    2346999999999999999999


Q ss_pred             cchHHHHHHHHHHHhcCChHHHHHHHHHhhhcCCccccccchhhhccChhhHHHHHhhhcCCCCCcccCccccccceeec
Q 047776          319 DTTSNALQWVMANLVKYPDIQEKVFKEIKGVVGDEEIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMVLN  398 (521)
Q Consensus       319 ~tt~~~l~~~l~~L~~~p~~q~klr~Ei~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~  398 (521)
                      |||+++++|++++|++||++|+|+++|++++++.+  +.++.+++++||||+|||+||||++|+++..++|.+.+|++++
T Consensus       311 eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~--~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~  388 (517)
T PLN02687        311 DTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRD--RLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEIN  388 (517)
T ss_pred             CchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCC--CCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeEC
Confidence            99999999999999999999999999999998765  6789999999999999999999999999977899999999999


Q ss_pred             cEEecCCcEEEEcccccccCCCCCCCCCCCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHHHHHHH
Q 047776          399 GFYFPKNAIINFMVAEMGCWDSEVWDDPTSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYF  478 (521)
Q Consensus       399 g~~ip~g~~v~~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~  478 (521)
                      ||.||||+.|.++.|++| |||++|+||++|+||||++.+.....   .....+..++|||+|+|.|+|++||++|++++
T Consensus       389 g~~ip~Gt~v~~~~~~~h-~d~~~~~dp~~F~PeRfl~~~~~~~~---~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~  464 (517)
T PLN02687        389 GYHIPKGATLLVNVWAIA-RDPEQWPDPLEFRPDRFLPGGEHAGV---DVKGSDFELIPFGAGRRICAGLSWGLRMVTLL  464 (517)
T ss_pred             CEEECCCCEEEEecHHhc-CCcccCCCcccCCchhcCCCCCcccc---ccCCCceeeCCCCCCCCCCCChHHHHHHHHHH
Confidence            999999999999999999 99999999999999999975211000   00112457999999999999999999999999


Q ss_pred             HHHHHHccEEEecCCCC---CcccccccceecccCCeeEEeecCC
Q 047776          479 VANLIWHYEWKAVDGDE---VDFEEKQEFTKVMKTPLKAHIHPRS  520 (521)
Q Consensus       479 l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~r~  520 (521)
                      +++||++|++++.++..   ++.....+.+..+..++++++++|.
T Consensus       465 la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~  509 (517)
T PLN02687        465 TATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRPRL  509 (517)
T ss_pred             HHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEeeccCC
Confidence            99999999999887642   2222233455556678999988884


No 6  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=3.1e-78  Score=602.92  Aligned_cols=488  Identities=27%  Similarity=0.452  Sum_probs=383.3

Q ss_pred             HHHHHHHHHHHHhccCCCCCCCCCCCCCCCCcccchhhhhhcCCCchHHHHHHHHhcCCeEEEEeCCccEEEecCHHHHH
Q 047776           12 CISALIKAFIHLLRPSKYFNYKLPPGPWNFPIIGNILLARKSVLDLEPMIHDLHKKFGPATTLHIGFRPVIFICDRSLAH   91 (521)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~Pgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dpe~i~   91 (521)
                      ++++++.+++++.+.+..++.+.||||+++|++||++.+.   .+++.++.+++++||++|++++++.++++++||+.++
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~~---~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~   87 (514)
T PLN03112         11 SVLIFNVLIWRWLNASMRKSLRLPPGPPRWPIVGNLLQLG---PLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIR   87 (514)
T ss_pred             HHHHHHHHHHHHccccccCCCCCccCCCCCCeeeeHHhcC---CchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHH
Confidence            3344444455566667777889999999999999998873   3678899999999999999999999999999999999


Q ss_pred             HHHHhCCccccCCCCCcccee-eeccCCcceeccCCChhHHHHHHHHHhhhcChhhHhhhHHHHHHHHHHHHHHHHHhhc
Q 047776           92 QALIQNGAVFSGRPPAGAVVK-ITSANQHNINSASYGPNWRLLRRNLISEIIHPSRLKSYSHARKWVLQILIDGLNLQAV  170 (521)
Q Consensus        92 ~v~~~~~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~  170 (521)
                      +|+.++.+.|++++....... .++.  ..+++..+|+.|+.+|+.+.++.|+.++++.+.+.+.++++.+++.+.+...
T Consensus        88 ~vl~~~~~~f~~~~~~~~~~~~~~g~--~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~  165 (514)
T PLN03112         88 EILLRQDDVFASRPRTLAAVHLAYGC--GDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQ  165 (514)
T ss_pred             HHHHhCCcccccCCCcccceeeccCC--CceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhc
Confidence            999888888988776432212 2222  2344556899999999997767899999999999999999999998765433


Q ss_pred             ccCCCCCcccchHHHHHHHHHHHHHHhhhcCcCCh------HhHHHHHHHHHHHHHhccccccccccchhhhhhhhhhhH
Q 047776          171 NNGDRDDRAVKLRDHIQFAMFCLLVLMCFGDKLDE------KKIREVEDVQRLMMLNTRRFNVLNFWPRVTKFVLRKLWG  244 (521)
Q Consensus       171 ~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~  244 (521)
                           ++.++|+.+.+.++++++++.++||.++..      +....+......+........+..++|.+..+......+
T Consensus       166 -----~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  240 (514)
T PLN03112        166 -----TGKPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEK  240 (514)
T ss_pred             -----cCCeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHH
Confidence                 366899999999999999999999998621      223344555444443322222334456544322222335


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhhhhhHHHHHhcCCCccCCCCCHHHHHHHHHHHhhhcccchHHH
Q 047776          245 EFFEILKKQESVLLPLIRDRRRMKEEGLSQAKEDENYVLAYVDTLFDLHLPEENRKLQENEIMSLCSEFLVAGTDTTSNA  324 (521)
Q Consensus       245 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~ag~~tt~~~  324 (521)
                      +..+..+.+.+++++.++++++..+.     ........|+++.++++..++.+..++++++.+++.++++||+|||+++
T Consensus       241 ~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~  315 (514)
T PLN03112        241 KMREVEKRVDEFHDKIIDEHRRARSG-----KLPGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVT  315 (514)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcc-----cccCCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHH
Confidence            55667777888888888877654322     0001123489999998653322346899999999999999999999999


Q ss_pred             HHHHHHHHhcCChHHHHHHHHHhhhcCCccccccchhhhccChhhHHHHHhhhcCCCCCcccCccccccceeeccEEecC
Q 047776          325 LQWVMANLVKYPDIQEKVFKEIKGVVGDEEIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMVLNGFYFPK  404 (521)
Q Consensus       325 l~~~l~~L~~~p~~q~klr~Ei~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~  404 (521)
                      ++|++++|++||++|+|||+|+++++++.  +.++.+++++||||+|||+||||++|++++.++|.+.+|++++||.|||
T Consensus       316 l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~--~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPk  393 (514)
T PLN03112        316 NEWAMAEVIKNPRVLRKIQEELDSVVGRN--RMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPA  393 (514)
T ss_pred             HHHHHHHHHhChHHHHHHHHHHHHhcCCC--CcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCC
Confidence            99999999999999999999999999865  6689999999999999999999999999977789999999999999999


Q ss_pred             CcEEEEcccccccCCCCCCCCCCCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHH
Q 047776          405 NAIINFMVAEMGCWDSEVWDDPTSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYFVANLIW  484 (521)
Q Consensus       405 g~~v~~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~  484 (521)
                      ||.|.++.|++| |||++|+||++|+||||..+.+....   .....+..++|||+|+|+|+|++||++|+++++++||+
T Consensus       394 Gt~v~~~~~~~h-~d~~~~~dP~~F~PeRf~~~~~~~~~---~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~  469 (514)
T PLN03112        394 KTRVFINTHGLG-RNTKIWDDVEEFRPERHWPAEGSRVE---ISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFH  469 (514)
T ss_pred             CCEEEEehHHhh-CCcccCCChhhcCCcccCCCCCCccc---cccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHH
Confidence            999999999999 99999999999999998754210000   00112357999999999999999999999999999999


Q ss_pred             ccEEEecCCC---CCcccccccceecccCCeeEEeecCC
Q 047776          485 HYEWKAVDGD---EVDFEEKQEFTKVMKTPLKAHIHPRS  520 (521)
Q Consensus       485 ~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~r~  520 (521)
                      +|++++.++.   .++.....++++.+++++++++.||.
T Consensus       470 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  508 (514)
T PLN03112        470 CFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVATPRL  508 (514)
T ss_pred             heeeecCCCCCcccCCCccccCcccccCCCeEEEeecCC
Confidence            9999987543   23333344666677889999999995


No 7  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=3.2e-78  Score=597.61  Aligned_cols=488  Identities=27%  Similarity=0.519  Sum_probs=383.0

Q ss_pred             HHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCcccchhhhhhcCCCchHHHHHHHHhcCCeEEEEeCCccEEEecC
Q 047776            7 ILISLCISALIKAFIHLLRPSKYFNYKLPPGPWNFPIIGNILLARKSVLDLEPMIHDLHKKFGPATTLHIGFRPVIFICD   86 (521)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d   86 (521)
                      +.++.++.++..++++.+..  +++.+.||||+++|++||++.+.   .+++.++.+++++||++|++++|+.++|+|+|
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~--~~~~~~pPgp~~~Pl~G~l~~~~---~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~d   81 (504)
T PLN00110          7 LAAATLLFFITRFFIRSLLP--KPSRKLPPGPRGWPLLGALPLLG---NMPHVALAKMAKRYGPVMFLKMGTNSMVVAST   81 (504)
T ss_pred             HHHHHHHHHHHHHHHHHHhh--cccCCCcccCCCCCeeechhhcC---CchHHHHHHHHHHhCCeEEEEcCCccEEEECC
Confidence            44555566666666665544  44667899999999999987763   35788999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCccccCCCCCccceeeeccCCcceeccCCChhHHHHHHHHHhhhcChhhHhhhHHHHHHHHHHHHHHHH
Q 047776           87 RSLAHQALIQNGAVFSGRPPAGAVVKITSANQHNINSASYGPNWRLLRRNLISEIIHPSRLKSYSHARKWVLQILIDGLN  166 (521)
Q Consensus        87 pe~i~~v~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~  166 (521)
                      |+++++++.++...|+.++.......... +....+++.+|+.|+++|+.+..+.|++++++.+.+.+.++++.+++.+.
T Consensus        82 pe~~~~vl~~~~~~f~~r~~~~~~~~~~~-~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~  160 (504)
T PLN00110         82 PEAARAFLKTLDINFSNRPPNAGATHLAY-GAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAML  160 (504)
T ss_pred             HHHHHHHHHhcchhhcCCCCccchhhhcc-CCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHH
Confidence            99999999888888988875432211211 22344556689999999999986689999999999999999999999987


Q ss_pred             HhhcccCCCCCcccchHHHHHHHHHHHHHHhhhcCcC-C--hHhHHHHHHHHHHHHHhccccccccccchhhhhhhhhhh
Q 047776          167 LQAVNNGDRDDRAVKLRDHIQFAMFCLLVLMCFGDKL-D--EKKIREVEDVQRLMMLNTRRFNVLNFWPRVTKFVLRKLW  243 (521)
Q Consensus       167 ~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~  243 (521)
                      +...     ++.++|+.+++..+++|+++.++||.++ +  ....+.+...............+..++|++.+.......
T Consensus       161 ~~~~-----~g~~~~~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~  235 (504)
T PLN00110        161 ELSQ-----RGEPVVVPEMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIE  235 (504)
T ss_pred             Hhcc-----CCCcEeHHHHHHHHHHHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHH
Confidence            6543     3668999999999999999999999876 2  122234555444443332222333456654332111222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhhhhhHHHHHhcCCCccCCCCCHHHHHHHHHHHhhhcccchHH
Q 047776          244 GEFFEILKKQESVLLPLIRDRRRMKEEGLSQAKEDENYVLAYVDTLFDLHLPEENRKLQENEIMSLCSEFLVAGTDTTSN  323 (521)
Q Consensus       244 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~ag~~tt~~  323 (521)
                      ++..+..+.+.+++.+.++++++..+.        .....|+++.+++....+++..++++++.+++.++++||+|||++
T Consensus       236 ~~~~~~~~~~~~~~~~~i~~~~~~~~~--------~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~  307 (504)
T PLN00110        236 RGMKHLHKKFDKLLTRMIEEHTASAHE--------RKGNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSS  307 (504)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccc--------cccCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHH
Confidence            344455667777777777776543211        011238999999754322345799999999999999999999999


Q ss_pred             HHHHHHHHHhcCChHHHHHHHHHhhhcCCccccccchhhhccChhhHHHHHhhhcCCCCCcccCccccccceeeccEEec
Q 047776          324 ALQWVMANLVKYPDIQEKVFKEIKGVVGDEEIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMVLNGFYFP  403 (521)
Q Consensus       324 ~l~~~l~~L~~~p~~q~klr~Ei~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip  403 (521)
                      +++|++++|++||++|+||++|+++++++.  +.++++++++||||+|||+||||++|++++.++|.+.+|++++||.||
T Consensus       308 ~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~--~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip  385 (504)
T PLN00110        308 VIEWSLAEMLKNPSILKRAHEEMDQVIGRN--RRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIP  385 (504)
T ss_pred             HHHHHHHHHHhCHHHHHHHHHHHHHHhCCC--CCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEEC
Confidence            999999999999999999999999999764  678999999999999999999999999997789999999999999999


Q ss_pred             CCcEEEEcccccccCCCCCCCCCCCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHH
Q 047776          404 KNAIINFMVAEMGCWDSEVWDDPTSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYFVANLI  483 (521)
Q Consensus       404 ~g~~v~~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll  483 (521)
                      ||+.|+++.|++| |||++|+||++|+||||++++.. +.  . .......++|||+|+|.|+|++||++|+++++++|+
T Consensus       386 ~Gt~V~~~~~~~h-~d~~~~~dP~~F~PeRfl~~~~~-~~--~-~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll  460 (504)
T PLN00110        386 KNTRLSVNIWAIG-RDPDVWENPEEFRPERFLSEKNA-KI--D-PRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLV  460 (504)
T ss_pred             CCCEEEEeHHHhc-CChhhcCCcccCCcccccCCCCc-cc--c-cCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence            9999999999999 99999999999999999965210 00  0 001125799999999999999999999999999999


Q ss_pred             HccEEEecCCCCCcccccccceecccCCeeEEeecCC
Q 047776          484 WHYEWKAVDGDEVDFEEKQEFTKVMKTPLKAHIHPRS  520 (521)
Q Consensus       484 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  520 (521)
                      ++|++++.++.+++.....+.++.++.|+.+++++|.
T Consensus       461 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  497 (504)
T PLN00110        461 HSFDWKLPDGVELNMDEAFGLALQKAVPLSAMVTPRL  497 (504)
T ss_pred             HhceeecCCCCccCcccccccccccCCCceEeeccCC
Confidence            9999998877654443445678888999999999984


No 8  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=1.3e-77  Score=596.72  Aligned_cols=465  Identities=25%  Similarity=0.465  Sum_probs=367.0

Q ss_pred             CCCCCCCCCCCCcccchhhhhhcCCCchHHHHHHHHhcCCeEEEEeCCccEEEecCHHHHHHHHHhCCccccCCCCCccc
Q 047776           31 NYKLPPGPWNFPIIGNILLARKSVLDLEPMIHDLHKKFGPATTLHIGFRPVIFICDRSLAHQALIQNGAVFSGRPPAGAV  110 (521)
Q Consensus        31 ~~~~~Pgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dpe~i~~v~~~~~~~f~~~~~~~~~  110 (521)
                      +.+.||||+++|++||++.+..  .++..++.+++++||++|++++|+.++|+++|||++++|+.+++..|..++.....
T Consensus        26 ~~~~pPgp~~~P~iG~~~~~~~--~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~  103 (499)
T PLN03234         26 SLRLPPGPKGLPIIGNLHQMEK--FNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQ  103 (499)
T ss_pred             CCCCCcCCCCCCeeccHHhcCC--CCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhh
Confidence            4578999999999999988732  35778999999999999999999999999999999999998888889888754322


Q ss_pred             eeeeccCCcceeccCCChhHHHHHHHHHhhhcChhhHhhhHHHHHHHHHHHHHHHHHhhcccCCCCCcccchHHHHHHHH
Q 047776          111 VKITSANQHNINSASYGPNWRLLRRNLISEIIHPSRLKSYSHARKWVLQILIDGLNLQAVNNGDRDDRAVKLRDHIQFAM  190 (521)
Q Consensus       111 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~  190 (521)
                      .. +...+..+.+...++.|+++|+.+..+.|+++++..+.+.+.++++++++.+.+...     +++++|+.+.+..++
T Consensus       104 ~~-~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~-----~~~~vd~~~~~~~~t  177 (499)
T PLN03234        104 QT-MSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAAD-----QSGTVDLSELLLSFT  177 (499)
T ss_pred             hh-hccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhcc-----CCCeEEHHHHHHHHH
Confidence            11 111112333445789999999986558999999999999999999999999976543     366899999999999


Q ss_pred             HHHHHHhhhcCcCChH--hHHHHHHHHHHHHHhccccccccccchhhhhh-hhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 047776          191 FCLLVLMCFGDKLDEK--KIREVEDVQRLMMLNTRRFNVLNFWPRVTKFV-LRKLWGEFFEILKKQESVLLPLIRDRRRM  267 (521)
Q Consensus       191 ~~~~~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  267 (521)
                      +|+++.++||.+++..  ....+.+.................+|++.... ....+++..+..+.+.+++.++++++++.
T Consensus       178 ~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~  257 (499)
T PLN03234        178 NCVVCRQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDP  257 (499)
T ss_pred             HHHHHHHHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999988532  22334443333332222222233445433211 12234566778888888888888876543


Q ss_pred             HHhcccccccchhhhhhhHHHHHhcCCCcc-CCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcCChHHHHHHHHH
Q 047776          268 KEEGLSQAKEDENYVLAYVDTLFDLHLPEE-NRKLQENEIMSLCSEFLVAGTDTTSNALQWVMANLVKYPDIQEKVFKEI  346 (521)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~-~~~ls~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~klr~Ei  346 (521)
                      .+.     .   ....|+++.+++...++. +..++++++.+++.++++||+|||+++++|++++|++||++|+|+|+|+
T Consensus       258 ~~~-----~---~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei  329 (499)
T PLN03234        258 NRP-----K---QETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEV  329 (499)
T ss_pred             ccc-----C---CCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            211     0   112378888886543211 2368999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCccccccchhhhccChhhHHHHHhhhcCCCCCcccCccccccceeeccEEecCCcEEEEcccccccCCCCCC-CC
Q 047776          347 KGVVGDEEIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMVLNGFYFPKNAIINFMVAEMGCWDSEVW-DD  425 (521)
Q Consensus       347 ~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~~d~~~~-~~  425 (521)
                      ++++++.  +.++++++++|||++|||+|+||++|++++.++|.+.+|++++||.|||||.|.++.|++| |||++| +|
T Consensus       330 ~~~~~~~--~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~-rd~~~~~~~  406 (499)
T PLN03234        330 RNVIGDK--GYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVS-RDTAAWGDN  406 (499)
T ss_pred             HHHhCCC--CCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhh-CCcccccCC
Confidence            9999764  6789999999999999999999999999976789999999999999999999999999999 999999 89


Q ss_pred             CCCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHHccEEEecCCC---CCcccccc
Q 047776          426 PTSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYFVANLIWHYEWKAVDGD---EVDFEEKQ  502 (521)
Q Consensus       426 p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~---~~~~~~~~  502 (521)
                      |++||||||+++..  +..   .......++|||+|+|+|+|+++|++|++++++.|+++|++++.++.   .+......
T Consensus       407 P~~F~PeR~l~~~~--~~~---~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  481 (499)
T PLN03234        407 PNEFIPERFMKEHK--GVD---FKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMT  481 (499)
T ss_pred             hhhcCchhhcCCCC--CcC---cCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCccccc
Confidence            99999999997521  100   01124679999999999999999999999999999999999998763   22333455


Q ss_pred             cceecccCCeeEEeecC
Q 047776          503 EFTKVMKTPLKAHIHPR  519 (521)
Q Consensus       503 ~~~~~~~~~~~v~~~~r  519 (521)
                      +.+..+++++.+..++|
T Consensus       482 ~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        482 GLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             ccccccCCCeEEEeecC
Confidence            77777888888888876


No 9  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=3.1e-77  Score=594.22  Aligned_cols=465  Identities=27%  Similarity=0.472  Sum_probs=361.9

Q ss_pred             CCCCCCCCCCCCcccchhhhhhcCCCchHHHHHHHHhcCCeEEEEeCCccEEEecCHHHHHHHHHhCCccccCCCCCccc
Q 047776           31 NYKLPPGPWNFPIIGNILLARKSVLDLEPMIHDLHKKFGPATTLHIGFRPVIFICDRSLAHQALIQNGAVFSGRPPAGAV  110 (521)
Q Consensus        31 ~~~~~Pgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dpe~i~~v~~~~~~~f~~~~~~~~~  110 (521)
                      +.+.||||+++|++|+++.+.   ...+.++.+|+++||++|++++|+.++|+|+||+++++|+.++...|+.++.....
T Consensus        34 ~~~~ppgp~~~Pl~G~l~~~~---~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~  110 (516)
T PLN02183         34 RLPYPPGPKGLPIIGNMLMMD---QLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAI  110 (516)
T ss_pred             CCCCCcCCCCCCeeccHHhcC---CcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccch
Confidence            347899999999999997763   24567899999999999999999999999999999999998888888887654322


Q ss_pred             eeeeccCCcceeccCCChhHHHHHHHHHhhhcChhhHhhhHHHHHHHHHHHHHHHHHhhcccCCCCCcccchHHHHHHHH
Q 047776          111 VKITSANQHNINSASYGPNWRLLRRNLISEIIHPSRLKSYSHARKWVLQILIDGLNLQAVNNGDRDDRAVKLRDHIQFAM  190 (521)
Q Consensus       111 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~  190 (521)
                      ....+. ....+++.+|+.|+.+|+.+.++.|+...++.+.+. .++++.+++.+...       .+.++|+.+.+..++
T Consensus       111 ~~~~~~-~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~-------~~~~v~~~~~~~~~~  181 (516)
T PLN02183        111 SYLTYD-RADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSN-------IGKPVNIGELIFTLT  181 (516)
T ss_pred             hccccC-CCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhc-------CCCcEeHHHHHHHHH
Confidence            222222 224455668999999999965589999999988875 46788899888541       256899999999999


Q ss_pred             HHHHHHhhhcCcCChHhHHHHHHHHHHHHHhccccccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 047776          191 FCLLVLMCFGDKLDEKKIREVEDVQRLMMLNTRRFNVLNFWPRVTKFVLRKLWGEFFEILKKQESVLLPLIRDRRRMKEE  270 (521)
Q Consensus       191 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  270 (521)
                      +|+++.++||.++++.. +.+.+....+............+|++..+.....+++..+..+.+.+++.++++++.+..+.
T Consensus       182 ~~vi~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  260 (516)
T PLN02183        182 RNITYRAAFGSSSNEGQ-DEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKN  260 (516)
T ss_pred             HHHHHhHhhcCcccchH-HHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            99999999999875422 34555444444333333344566665432222234556667778888888888877655422


Q ss_pred             cccccccchhhhhhhHHHHHhcCCCc----------cCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcCChHHH
Q 047776          271 GLSQAKEDENYVLAYVDTLFDLHLPE----------ENRKLQENEIMSLCSEFLVAGTDTTSNALQWVMANLVKYPDIQE  340 (521)
Q Consensus       271 ~~~~~~~~~~~~~~~l~~ll~~~~~~----------~~~~ls~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~  340 (521)
                      +... ........|+++.++++..++          .+..++++++.+++.++++||+|||+++++|++++|++||++|+
T Consensus       261 ~~~~-~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~  339 (516)
T PLN02183        261 QNAD-NDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLK  339 (516)
T ss_pred             cccc-cccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHH
Confidence            1000 000112347999988754321          12358999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhcCCccccccchhhhccChhhHHHHHhhhcCCCCCcccCccccccceeeccEEecCCcEEEEcccccccCCC
Q 047776          341 KVFKEIKGVVGDEEIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMVLNGFYFPKNAIINFMVAEMGCWDS  420 (521)
Q Consensus       341 klr~Ei~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~~d~  420 (521)
                      |+++|++++++.+  +.++.+++++||||+|||+||||++|++|+. .|.+.+|++++||.|||||.|.++.|++| |||
T Consensus       340 kl~~Ei~~v~~~~--~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d~~l~g~~IPkGt~V~~~~~~~h-rd~  415 (516)
T PLN02183        340 RVQQELADVVGLN--RRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAEDAEVAGYFIPKRSRVMINAWAIG-RDK  415 (516)
T ss_pred             HHHHHHHHHcCCC--CCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCceeECCEEECCCCEEEEehhhhc-CCc
Confidence            9999999999754  6789999999999999999999999999965 69999999999999999999999999999 999


Q ss_pred             CCCCCCCCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHHccEEEecCCCC---Cc
Q 047776          421 EVWDDPTSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYFVANLIWHYEWKAVDGDE---VD  497 (521)
Q Consensus       421 ~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~---~~  497 (521)
                      ++|+||++|+||||++++.   ..  . ..+...|+|||+|+|+|+|++||++|+++++|+|+++|+++..++..   ..
T Consensus       416 ~~~~dP~~F~PeRfl~~~~---~~--~-~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~  489 (516)
T PLN02183        416 NSWEDPDTFKPSRFLKPGV---PD--F-KGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELD  489 (516)
T ss_pred             cccCCccccCchhhCCCCC---cc--c-cCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCC
Confidence            9999999999999997521   00  0 11245799999999999999999999999999999999999877642   22


Q ss_pred             ccccccceecccCCeeEEeecC
Q 047776          498 FEEKQEFTKVMKTPLKAHIHPR  519 (521)
Q Consensus       498 ~~~~~~~~~~~~~~~~v~~~~r  519 (521)
                      .....+.+..++.++.+.+++|
T Consensus       490 ~~~~~~~~~~~~~~~~~~~~~r  511 (516)
T PLN02183        490 MNDVFGLTAPRATRLVAVPTYR  511 (516)
T ss_pred             hhhccccccccCCCcEEEeecC
Confidence            2223345544566888888887


No 10 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=2.5e-77  Score=592.12  Aligned_cols=475  Identities=23%  Similarity=0.352  Sum_probs=364.2

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCcccchhhhhhcCCCchHHHHHHHHhcCCeEEEEeCCcc
Q 047776            1 METWSVILISLCISALIKAFIHLLRPSKYFNYKLPPGPWNFPIIGNILLARKSVLDLEPMIHDLHKKFGPATTLHIGFRP   80 (521)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~   80 (521)
                      |..|.+++.+++.+++...+.++.+    +....+|||+++|++||++.+.   .+++..+.+++++||++|++++|+.+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~pgp~~~p~~G~~~~~~---~~~~~~~~~~~~~yG~i~~~~~g~~~   73 (482)
T PTZ00404          1 MMLFNIILFLFIFYIIHNAYKKYKK----IHKNELKGPIPIPILGNLHQLG---NLPHRDLTKMSKKYGGIFRIWFADLY   73 (482)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhh----ccCCCCCCCCCCCeeccHhhhc---ccHHHHHHHHHHHhCCeeEEEecCCC
Confidence            4556666655555555555444443    3457789999999999998874   26789999999999999999999999


Q ss_pred             EEEecCHHHHHHHHHhCCccccCCCCCccceeeeccCCcceeccCCChhHHHHHHHHHhhhcChhhHhhhHHHHHHHHHH
Q 047776           81 VIFICDRSLAHQALIQNGAVFSGRPPAGAVVKITSANQHNINSASYGPNWRLLRRNLISEIIHPSRLKSYSHARKWVLQI  160 (521)
Q Consensus        81 ~vvv~dpe~i~~v~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~  160 (521)
                      +|+++||+++++|+.++...|..++.........  .+.+++. .+|+.|+++|+.+. +.|++.+++.+.+.+.+.++.
T Consensus        74 ~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~~~--~~~~l~~-~~g~~w~~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~  149 (482)
T PTZ00404         74 TVVLSDPILIREMFVDNFDNFSDRPKIPSIKHGT--FYHGIVT-SSGEYWKRNREIVG-KAMRKTNLKHIYDLLDDQVDV  149 (482)
T ss_pred             EEEECCHHHHHHHHHhcchhhcCCCCcceeeeec--cCCceec-cChHHHHHHHHHHH-HHHhhhccccHHHHHHHHHHH
Confidence            9999999999999987777787776543221111  1235544 48999999999987 899999999999999999999


Q ss_pred             HHHHHHHhhcccCCCCCcccchHHHHHHHHHHHHHHhhhcCcCChH------hHHHHHHHHHHHHHhccccccccccchh
Q 047776          161 LIDGLNLQAVNNGDRDDRAVKLRDHIQFAMFCLLVLMCFGDKLDEK------KIREVEDVQRLMMLNTRRFNVLNFWPRV  234 (521)
Q Consensus       161 l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~p~l  234 (521)
                      +++.|.+...     ++..+|+.+.+.++++|+++.++||.+++..      ....+.+.....+...........++++
T Consensus       150 l~~~l~~~~~-----~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (482)
T PTZ00404        150 LIESMKKIES-----SGETFEPRYYLTKFTMSAMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEIT  224 (482)
T ss_pred             HHHHHHHHHh-----cCCccCHHHHHHHHHHHHHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHh
Confidence            9999976543     3667999999999999999999999987421      1133444444443332222222222322


Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhhhhhHHHHHhcCCCccCCCCCHHHHHHHHHHHh
Q 047776          235 TKFVLRKLWGEFFEILKKQESVLLPLIRDRRRMKEEGLSQAKEDENYVLAYVDTLFDLHLPEENRKLQENEIMSLCSEFL  314 (521)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~  314 (521)
                      ... .........+..+.+.+++.+.++++++...         .+...|+++.++++..+  ......+++.+++.+++
T Consensus       225 ~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---------~~~~~dll~~ll~~~~~--~~~~~~~~i~~~~~~~~  292 (482)
T PTZ00404        225 QPL-YYQYLEHTDKNFKKIKKFIKEKYHEHLKTID---------PEVPRDLLDLLIKEYGT--NTDDDILSILATILDFF  292 (482)
T ss_pred             hhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHccC---------CCCcccHHHHHHHHhcc--CCcccHHHHHHHHHHHH
Confidence            211 1111112233444555555555544433210         01124899999976421  11223345889999999


Q ss_pred             hhcccchHHHHHHHHHHHhcCChHHHHHHHHHhhhcCCccccccchhhhccChhhHHHHHhhhcCCCCCcccCccccccc
Q 047776          315 VAGTDTTSNALQWVMANLVKYPDIQEKVFKEIKGVVGDEEIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQD  394 (521)
Q Consensus       315 ~ag~~tt~~~l~~~l~~L~~~p~~q~klr~Ei~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d  394 (521)
                      +||+|||+++++|++++|++||++|+||++|+++++++.  ..++++++++||||+|||+||||++|++|..++|.+.+|
T Consensus       293 ~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~--~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d  370 (482)
T PTZ00404        293 LAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGR--NKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSND  370 (482)
T ss_pred             HhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCC--CCCCccccccChHHHHHHHHHHHhcCCcccccceeccCC
Confidence            999999999999999999999999999999999999875  568999999999999999999999999997679999999


Q ss_pred             eee-ccEEecCCcEEEEcccccccCCCCCCCCCCCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHH
Q 047776          395 MVL-NGFYFPKNAIINFMVAEMGCWDSEVWDDPTSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAML  473 (521)
Q Consensus       395 ~~i-~g~~ip~g~~v~~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~  473 (521)
                      +++ +||.||||+.|.++.+++| |||++||||++|+||||++..            ....++|||+|+|.|+|++||++
T Consensus       371 ~~l~~g~~Ip~Gt~V~~~~~a~h-rdp~~~~dP~~F~PeRwl~~~------------~~~~~~pFg~G~R~C~G~~~A~~  437 (482)
T PTZ00404        371 IIIGGGHFIPKDAQILINYYSLG-RNEKYFENPEQFDPSRFLNPD------------SNDAFMPFSIGPRNCVGQQFAQD  437 (482)
T ss_pred             EEecCCeEECCCCEEEeeHHHhh-CCccccCCccccCccccCCCC------------CCCceeccCCCCCCCccHHHHHH
Confidence            999 9999999999999999999 999999999999999999651            13579999999999999999999


Q ss_pred             HHHHHHHHHHHccEEEecCCCCCcccccccceecccCCeeEEeecC
Q 047776          474 HLEYFVANLIWHYEWKAVDGDEVDFEEKQEFTKVMKTPLKAHIHPR  519 (521)
Q Consensus       474 e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  519 (521)
                      |++++++.|+++|+++..++.++......+.+.. +.+++|.+++|
T Consensus       438 e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        438 ELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK-PNKFKVLLEKR  482 (482)
T ss_pred             HHHHHHHHHHHhcEEecCCCCCCCcccccceeec-CCCceeeeecC
Confidence            9999999999999999877655433334556666 78999999987


No 11 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=4.1e-77  Score=591.98  Aligned_cols=493  Identities=25%  Similarity=0.442  Sum_probs=369.0

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCcccchhhhhhcCCCchHHHHHHHHhcCCeEEEEeCCcc
Q 047776            1 METWSVILISLCISALIKAFIHLLRPSKYFNYKLPPGPWNFPIIGNILLARKSVLDLEPMIHDLHKKFGPATTLHIGFRP   80 (521)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~   80 (521)
                      |+-+.+.++++++++..+++.++.+    ++.+.||||+++|++||++.+.  ..+++.++.+|+++||++|++++|+.+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ppgp~~~p~~G~l~~l~--~~~~~~~~~~~~~~yG~v~~~~~g~~~   74 (502)
T PLN02966          1 MEDIIIGVVALAAVLLFFLYQKPKT----KRYKLPPGPSPLPVIGNLLQLQ--KLNPQRFFAGWAKKYGPILSYRIGSRT   74 (502)
T ss_pred             CCceEEeHHHHHHHHHHHHHhcccc----CCCCCCcCCCCCCeeccHHhcC--CCChhHHHHHHHHHhCCeEEEecCCCc
Confidence            4555555555555544444443332    2446799999999999998873  236788999999999999999999999


Q ss_pred             EEEecCHHHHHHHHHhCCccccCCCCCccceeeeccCCcceeccCCChhHHHHHHHHHhhhcChhhHhhhHHHHHHHHHH
Q 047776           81 VIFICDRSLAHQALIQNGAVFSGRPPAGAVVKITSANQHNINSASYGPNWRLLRRNLISEIIHPSRLKSYSHARKWVLQI  160 (521)
Q Consensus        81 ~vvv~dpe~i~~v~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~  160 (521)
                      +|+++||+.+++|+.+++..|.+++.... ...+..+...+.+..+|+.|+.+|+.+.++.|++.++..+.+.+.+.++.
T Consensus        75 ~vvi~~p~~i~~vl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~  153 (502)
T PLN02966         75 MVVISSAELAKELLKTQDVNFADRPPHRG-HEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARR  153 (502)
T ss_pred             EEEECCHHHHHHHHHhCcccccCCCCCcc-ceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence            99999999999999887777877654331 22222222234445579999999999666999999999999999999999


Q ss_pred             HHHHHHHhhcccCCCCCcccchHHHHHHHHHHHHHHhhhcCcCCh--HhHHHHHHHHHHHHHhccccccccccchhhhhh
Q 047776          161 LIDGLNLQAVNNGDRDDRAVKLRDHIQFAMFCLLVLMCFGDKLDE--KKIREVEDVQRLMMLNTRRFNVLNFWPRVTKFV  238 (521)
Q Consensus       161 l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~  238 (521)
                      +++.|.+...     +++.+|+.+++..+++|+++.++||.+++.  +....+.+.............+..++|++..+.
T Consensus       154 l~~~l~~~~~-----~~~~vdl~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  228 (502)
T PLN02966        154 MMDKINKAAD-----KSEVVDISELMLTFTNSVVCRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLD  228 (502)
T ss_pred             HHHHHHHhcc-----CCCceeHHHHHHHHHHHHHHHHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhh
Confidence            9999976543     356799999999999999999999998843  222334443333332222222233445322111


Q ss_pred             hhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhhhhhHHHHHhcCCCcc-CCCCCHHHHHHHHHHHhhh
Q 047776          239 LRKLW-GEFFEILKKQESVLLPLIRDRRRMKEEGLSQAKEDENYVLAYVDTLFDLHLPEE-NRKLQENEIMSLCSEFLVA  316 (521)
Q Consensus       239 ~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~-~~~ls~~~i~~~~~~~~~a  316 (521)
                      ....+ .......+...+++.+.+++.......   .     ....++++.++++.+++. +..++++++.+++.++++|
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~-----~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~A  300 (502)
T PLN02966        229 DLSGLTAYMKECFERQDTYIQEVVNETLDPKRV---K-----PETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVA  300 (502)
T ss_pred             hhccHHHHHHHHHHHHHHHHHHHHHHHHhcccc---c-----cccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhc
Confidence            01111 122234445556666666654432111   0     112378888887654321 3468999999999999999


Q ss_pred             cccchHHHHHHHHHHHhcCChHHHHHHHHHhhhcCCccccccchhhhccChhhHHHHHhhhcCCCCCcccCcccccccee
Q 047776          317 GTDTTSNALQWVMANLVKYPDIQEKVFKEIKGVVGDEEIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMV  396 (521)
Q Consensus       317 g~~tt~~~l~~~l~~L~~~p~~q~klr~Ei~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~  396 (521)
                      |+|||+++++|++++|++||++|+|+++|+++++++.+.+.++++++++||||+|||+|+||++|++|..++|.+.+|++
T Consensus       301 G~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~  380 (502)
T PLN02966        301 GTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTK  380 (502)
T ss_pred             cccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCee
Confidence            99999999999999999999999999999999997533246899999999999999999999999999777899999999


Q ss_pred             eccEEecCCcEEEEcccccccCCCCCC-CCCCCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHHHH
Q 047776          397 LNGFYFPKNAIINFMVAEMGCWDSEVW-DDPTSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHL  475 (521)
Q Consensus       397 i~g~~ip~g~~v~~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~  475 (521)
                      ++||.|||||.|.++.|++| |||++| |||++|+||||++.+.   .    ....+..++|||+|+|+|+|++||++|+
T Consensus       381 l~g~~IP~Gt~V~~~~~~~~-rdp~~~g~dP~~F~PeRwl~~~~---~----~~~~~~~~~pFg~G~R~C~G~~~A~~el  452 (502)
T PLN02966        381 IAGYDIPAGTTVNVNAWAVS-RDEKEWGPNPDEFRPERFLEKEV---D----FKGTDYEFIPFGSGRRMCPGMRLGAAML  452 (502)
T ss_pred             EccEEECCCCEEEEeccccc-CCcccccCChhhCChhhhcCCCC---C----cCCCcCCccCCCCCCCCCCCHHHHHHHH
Confidence            99999999999999999999 999999 9999999999996521   0    0112467999999999999999999999


Q ss_pred             HHHHHHHHHccEEEecCCCC---CcccccccceecccCCeeEEeecCCC
Q 047776          476 EYFVANLIWHYEWKAVDGDE---VDFEEKQEFTKVMKTPLKAHIHPRSK  521 (521)
Q Consensus       476 ~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~r~~  521 (521)
                      ++++|.||++|+|++.++..   ++.+...+++..++.++++..++-+|
T Consensus       453 ~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (502)
T PLN02966        453 EVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLVPEKVNK  501 (502)
T ss_pred             HHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCeEEEEEeCCC
Confidence            99999999999999887642   22234445555455567666655443


No 12 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=1.7e-76  Score=589.40  Aligned_cols=467  Identities=26%  Similarity=0.460  Sum_probs=356.0

Q ss_pred             CCCCCCCCCCCCcccchhhhhhcCCCchHHHHHHHHhcCCeEEEEeCCccEEEecCHHHHHHHHHhCCccccCCCCCccc
Q 047776           31 NYKLPPGPWNFPIIGNILLARKSVLDLEPMIHDLHKKFGPATTLHIGFRPVIFICDRSLAHQALIQNGAVFSGRPPAGAV  110 (521)
Q Consensus        31 ~~~~~Pgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dpe~i~~v~~~~~~~f~~~~~~~~~  110 (521)
                      +.+.||||+++|++|+++.+.+  ...+..+.+|+++||++|++++|+.++|+|+||+.+++|+.+++..|..++... +
T Consensus        28 ~~~~pPgp~~~p~~g~l~~~~~--~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~-~  104 (503)
T PLN02394         28 KLKLPPGPAAVPIFGNWLQVGD--DLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNV-V  104 (503)
T ss_pred             cCCCCcCCCCCCeeeeHHhcCC--CchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcc-h
Confidence            4578999999999999987742  235689999999999999999999999999999999999987777788766443 2


Q ss_pred             eeeeccCCcceeccCCChhHHHHHHHHHhhhcChhhHhhhHHHHHHHHHHHHHHHHHhhcccCCCCCcccchHHHHHHHH
Q 047776          111 VKITSANQHNINSASYGPNWRLLRRNLISEIIHPSRLKSYSHARKWVLQILIDGLNLQAVNNGDRDDRAVKLRDHIQFAM  190 (521)
Q Consensus       111 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~  190 (521)
                      ...+.+.+.+.+++.+|+.|+++||.+..+.|+++.++.+.+.+.++++.+++.+......    ++..+|+.+.+..++
T Consensus       105 ~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~----~~~~v~~~~~~~~~~  180 (503)
T PLN02394        105 FDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEA----ATEGVVIRRRLQLMM  180 (503)
T ss_pred             HhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhc----cCCcEecHHHHHHHH
Confidence            2333222234455568999999999987689999999999999999999999998754321    234689999999999


Q ss_pred             HHHHHHhhhcCcCChH---hHHHHHHHHHHHHHhccc--cccccccchhhhhhhhhhhHHHHHHHHHHHH-HHHHHHHHH
Q 047776          191 FCLLVLMCFGDKLDEK---KIREVEDVQRLMMLNTRR--FNVLNFWPRVTKFVLRKLWGEFFEILKKQES-VLLPLIRDR  264 (521)
Q Consensus       191 ~~~~~~~~fG~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~  264 (521)
                      +|+++.++||.+++..   ....+.............  ..+..++|++.... ....+........... +.+.+++++
T Consensus       181 ~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~  259 (503)
T PLN02394        181 YNIMYRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFL-RGYLKICQDVKERRLALFKDYFVDER  259 (503)
T ss_pred             HHHHHHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999988432   122222222222111111  12234455443311 1111111122222222 234456655


Q ss_pred             HHHHHhcccccccchhhhhhhHHHHHhcCCCccCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcCChHHHHHHH
Q 047776          265 RRMKEEGLSQAKEDENYVLAYVDTLFDLHLPEENRKLQENEIMSLCSEFLVAGTDTTSNALQWVMANLVKYPDIQEKVFK  344 (521)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~klr~  344 (521)
                      ++..+...    .+.+...|+++.++++.   .++.++++++..++.++++||+||||++++|++++|++||++|+|||+
T Consensus       260 ~~~~~~~~----~~~~~~~d~l~~ll~~~---~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~  332 (503)
T PLN02394        260 KKLMSAKG----MDKEGLKCAIDHILEAQ---KKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRD  332 (503)
T ss_pred             HHHhhhcc----CCcchhhhHHHHHHhcc---ccCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHH
Confidence            54332100    01112358999999865   234589999999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCccccccchhhhccChhhHHHHHhhhcCCCCCcccCccccccceeeccEEecCCcEEEEcccccccCCCCCCC
Q 047776          345 EIKGVVGDEEIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMVLNGFYFPKNAIINFMVAEMGCWDSEVWD  424 (521)
Q Consensus       345 Ei~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~~d~~~~~  424 (521)
                      ||+++++.+  +.++++++++||||+|||+|+||++|++|...+|.+.+|++++||.|||||.|.++.|++| |||++|+
T Consensus       333 Ei~~v~~~~--~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~-rd~~~~~  409 (503)
T PLN02394        333 ELDTVLGPG--NQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLA-NNPELWK  409 (503)
T ss_pred             HHHHHhCCC--CCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHh-CCcccCC
Confidence            999999764  6689999999999999999999999999988789999999999999999999999999999 9999999


Q ss_pred             CCCCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHHccEEEecCCC-CCccccccc
Q 047776          425 DPTSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYFVANLIWHYEWKAVDGD-EVDFEEKQE  503 (521)
Q Consensus       425 ~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~  503 (521)
                      ||++|+||||++++++ ..    .......++|||+|+|+|+|++||++|+++++|+|+++|++++.++. .++.....+
T Consensus       410 ~P~~F~PeRwl~~~~~-~~----~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~  484 (503)
T PLN02394        410 NPEEFRPERFLEEEAK-VE----ANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGG  484 (503)
T ss_pred             CccccCccccCCCCCc-cc----ccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccC
Confidence            9999999999975220 00    01123579999999999999999999999999999999999988775 344444444


Q ss_pred             -ceecccCCeeEEeecCC
Q 047776          504 -FTKVMKTPLKAHIHPRS  520 (521)
Q Consensus       504 -~~~~~~~~~~v~~~~r~  520 (521)
                       +.+..+++++|+++||+
T Consensus       485 ~~~~~~~~~~~~~~~~r~  502 (503)
T PLN02394        485 QFSLHIAKHSTVVFKPRS  502 (503)
T ss_pred             ceeeccCCCceEEeecCC
Confidence             55557889999999996


No 13 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=2e-75  Score=574.40  Aligned_cols=454  Identities=26%  Similarity=0.502  Sum_probs=359.4

Q ss_pred             CCCCCCCCcccchhhhhhcCCCchHHHHHHHHhcCCeEEEEeCCccEEEecCHHHHHHHHHhCCccccCCCCCccceeee
Q 047776           35 PPGPWNFPIIGNILLARKSVLDLEPMIHDLHKKFGPATTLHIGFRPVIFICDRSLAHQALIQNGAVFSGRPPAGAVVKIT  114 (521)
Q Consensus        35 ~Pgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dpe~i~~v~~~~~~~f~~~~~~~~~~~~~  114 (521)
                      ||||+++|++||++++..  .+++.++++|+++||++|++++|+.++++|+||+++++|+.++...|+.++..... ..+
T Consensus         1 ppgp~~lP~iG~l~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~-~~~   77 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKE--KKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKAL-TVL   77 (466)
T ss_pred             CcCCCCCCccccHHHcCC--CchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHH-HHH
Confidence            789999999999988742  35789999999999999999999999999999999999999888888887654322 223


Q ss_pred             ccCCcceeccCCChhHHHHHHHHHhhhcChhhHhhhHHHHHHHHHHHHHHHHHhhcccCCCCCcccchHHHHHHHHHHHH
Q 047776          115 SANQHNINSASYGPNWRLLRRNLISEIIHPSRLKSYSHARKWVLQILIDGLNLQAVNNGDRDDRAVKLRDHIQFAMFCLL  194 (521)
Q Consensus       115 ~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~  194 (521)
                      +.++..+.+..+|+.|+.+|+.+.+++|+...++.+.+.+.+.++.+++.+.+.....   .++++|+.+.+.++++|++
T Consensus        78 ~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~vd~~~~~~~~t~dvi  154 (466)
T PLN02655         78 TRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDD---PHSPVNFRDVFENELFGLS  154 (466)
T ss_pred             hcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhcccc---CCCceeHHHHHHHHHHHHH
Confidence            3222345555569999999998887889988899999999999999999887654311   2567999999999999999


Q ss_pred             HHhhhcCcCChHh---H-------HHHHHHHHHHHHhccccccccccchhhhhhhhhhhH-HHHHHHHHHHHHHHHHHHH
Q 047776          195 VLMCFGDKLDEKK---I-------REVEDVQRLMMLNTRRFNVLNFWPRVTKFVLRKLWG-EFFEILKKQESVLLPLIRD  263 (521)
Q Consensus       195 ~~~~fG~~~~~~~---~-------~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~  263 (521)
                      +.++||.+++...   .       ..+...............+.+++|.+.++ ....+. ...+....+.+++..++++
T Consensus       155 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~  233 (466)
T PLN02655        155 LIQALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWI-PNKSFETRVQTTEFRRTAVMKALIKQ  233 (466)
T ss_pred             HHHHhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhc-CchhHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999998874311   1       11222223333222222233456654332 222222 2222233445677777776


Q ss_pred             HHHHHHhcccccccchhhhhhhHHHHHhcCCCccCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcCChHHHHHH
Q 047776          264 RRRMKEEGLSQAKEDENYVLAYVDTLFDLHLPEENRKLQENEIMSLCSEFLVAGTDTTSNALQWVMANLVKYPDIQEKVF  343 (521)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~klr  343 (521)
                      +++....     .   ....|+++.+++..     ..+|++++.+++.++++||+|||+++++|++++|++||++|+|+|
T Consensus       234 ~~~~~~~-----~---~~~~d~l~~ll~~~-----~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~  300 (466)
T PLN02655        234 QKKRIAR-----G---EERDCYLDFLLSEA-----THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLY  300 (466)
T ss_pred             HHHhhcC-----C---CCcccHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence            6654322     1   11237999999754     348999999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCccccccchhhhccChhhHHHHHhhhcCCCCCcccCccccccceeeccEEecCCcEEEEcccccccCCCCCC
Q 047776          344 KEIKGVVGDEEIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMVLNGFYFPKNAIINFMVAEMGCWDSEVW  423 (521)
Q Consensus       344 ~Ei~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~~d~~~~  423 (521)
                      +|++++++++  . ++.+++++||||+|||+||||++|+++...+|.+.+|++++||.||||+.|+++.|++| |||++|
T Consensus       301 ~Ei~~~~~~~--~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~-~d~~~~  376 (466)
T PLN02655        301 REIREVCGDE--R-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCN-MDKKRW  376 (466)
T ss_pred             HHHHHHhCCC--C-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhc-CCcccC
Confidence            9999999863  3 89999999999999999999999999987789999999999999999999999999999 999999


Q ss_pred             CCCCCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHHccEEEecCCCCCccccccc
Q 047776          424 DDPTSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYFVANLIWHYEWKAVDGDEVDFEEKQE  503 (521)
Q Consensus       424 ~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~  503 (521)
                      +||++|+||||+++++   .     ......++|||+|+|.|+|++||+.|+++++++||++|++++.++.. +.....+
T Consensus       377 ~~p~~F~PeR~~~~~~---~-----~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~  447 (466)
T PLN02655        377 ENPEEWDPERFLGEKY---E-----SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-EKEDTVQ  447 (466)
T ss_pred             CChhccCccccCCCCc---c-----cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-cccchhh
Confidence            9999999999997621   1     11236799999999999999999999999999999999999876643 2234457


Q ss_pred             ceecccCCeeEEeecCCC
Q 047776          504 FTKVMKTPLKAHIHPRSK  521 (521)
Q Consensus       504 ~~~~~~~~~~v~~~~r~~  521 (521)
                      ++..+++|+.|++++|.+
T Consensus       448 ~~~~~~~~~~~~~~~r~~  465 (466)
T PLN02655        448 LTTQKLHPLHAHLKPRGS  465 (466)
T ss_pred             eeEeecCCcEEEEeecCC
Confidence            778889999999999975


No 14 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=3.2e-76  Score=577.97  Aligned_cols=458  Identities=28%  Similarity=0.429  Sum_probs=361.7

Q ss_pred             CCCCCCCCCCCCcccchhhhhhcCCCchHHHHHHHHhcCCeEEEEeCCccEEEecCHHHHHHHHHhCCccccCCCCCc-c
Q 047776           31 NYKLPPGPWNFPIIGNILLARKSVLDLEPMIHDLHKKFGPATTLHIGFRPVIFICDRSLAHQALIQNGAVFSGRPPAG-A  109 (521)
Q Consensus        31 ~~~~~Pgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dpe~i~~v~~~~~~~f~~~~~~~-~  109 (521)
                      ....||||+++|++|+++.+.....+...++.++..+||++|+.|+|+.++++++||+.+++|+.++.+.+.+.+... .
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            456799999999999999986422567788999999999999999999999999999999999976666666665554 3


Q ss_pred             ceeeeccCCcceeccCCChhHHHHHHHHHhhhcChhhHhhhHHHHHHHHHHHHHHHHHhhcccCCCCCcccchHHHHHHH
Q 047776          110 VVKITSANQHNINSASYGPNWRLLRRNLISEIIHPSRLKSYSHARKWVLQILIDGLNLQAVNNGDRDDRAVKLRDHIQFA  189 (521)
Q Consensus       110 ~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~  189 (521)
                      +...+|.   +++++. |+.|+.+||+++ +.|+...++.+...+.+....+...+.....      +..+|+.+.+.++
T Consensus       113 ~~~~lG~---gll~~~-g~~W~~~Rk~~~-~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~------~~~vd~~~~~~~~  181 (497)
T KOG0157|consen  113 LKPWLGD---GLLFSD-GEKWHKHRKLLT-PAFHFEILKSFVPVFIESSLILLLLLELAAS------GEEVDLQDLLKRL  181 (497)
T ss_pred             HHHHhcC---ccccCC-chHHHHHHhhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc------CCeEcHHHHHHHH
Confidence            4566654   666664 999999999988 9999999999999999988888888776432      3339999999999


Q ss_pred             HHHHHHHhhhcCcC-C--hHhHHHHHHHHHHHHHhccccccccccc-hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 047776          190 MFCLLVLMCFGDKL-D--EKKIREVEDVQRLMMLNTRRFNVLNFWP-RVTKFVLRKLWGEFFEILKKQESVLLPLIRDRR  265 (521)
Q Consensus       190 ~~~~~~~~~fG~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  265 (521)
                      ++|+++.++||... +  ......+............   ..-..| +...+......++..++.+.++++++++|++++
T Consensus       182 tld~i~~~~~G~~~~~~~~~~~~~~~~a~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr  258 (497)
T KOG0157|consen  182 TLDIICKTAMGPESLDAEGPELFEYVQAFDDLTELIS---KRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERR  258 (497)
T ss_pred             HHHHHHHHhcCCccccccCCcccHHHHHHHHHHHHHH---HHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999332 1  1111122222221111111   111223 222211222567778889999999999999999


Q ss_pred             HHHHhcccccccchhhhhhhHHHHHhcCCCccCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcCChHHHHHHHH
Q 047776          266 RMKEEGLSQAKEDENYVLAYVDTLFDLHLPEENRKLQENEIMSLCSEFLVAGTDTTSNALQWVMANLVKYPDIQEKVFKE  345 (521)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~klr~E  345 (521)
                      +..+++....   .....|+++.+...    .+..++++++.+++.++++||+||||++++|+++.|+.||++|+|+++|
T Consensus       259 ~~~~~~~~~~---~~~~~d~L~~~~~~----~~~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eE  331 (497)
T KOG0157|consen  259 EELEKEGSGE---EKKRLDFLDTLLLE----EDKPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREE  331 (497)
T ss_pred             HHHHhcCCcc---cchhhhHHHHHHHh----ccCCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            8765422111   13345788863332    2267999999999999999999999999999999999999999999999


Q ss_pred             HhhhcCCccccccchhhhccChhhHHHHHhhhcCCCCCcccCccccccceee-ccEEecCCcEEEEcccccccCCCCCCC
Q 047776          346 IKGVVGDEEIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMVL-NGFYFPKNAIINFMVAEMGCWDSEVWD  424 (521)
Q Consensus       346 i~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i-~g~~ip~g~~v~~~~~~~~~~d~~~~~  424 (521)
                      +++++++.+ ...+....++|+||++||+||||||||+| .+.|.+.+|+++ +||.||||+.|.+++|++| ||+++|+
T Consensus       332 i~~i~~~~~-~~~~~~~~~~m~yl~~vi~EsLRLyppvp-~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~-r~~~~~~  408 (497)
T KOG0157|consen  332 VDEILGNRD-DKWEVEKLDQMKYLEMVIKESLRLYPPVP-LVARKATKDVKLPGGYTIPKGTNVLISIYALH-RDPRVWG  408 (497)
T ss_pred             HHHHhCCCC-CCCChhhhhhhHHHHHHHHHHhccCCCCc-hhhcccCCCeEcCCCcEeCCCCEEEEehHHhc-cCccccC
Confidence            999998643 22233333369999999999999999999 568999999999 5899999999999999999 9999996


Q ss_pred             -CCCCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHHccEEEecCCCCCccccccc
Q 047776          425 -DPTSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYFVANLIWHYEWKAVDGDEVDFEEKQE  503 (521)
Q Consensus       425 -~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~  503 (521)
                       ||++||||||++++.       ....++++|+|||+|+|.|+|++||++|+|+++++++++|++++..+..  ......
T Consensus       409 ~dp~~F~PeRf~~~~~-------~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~--~~~~~~  479 (497)
T KOG0157|consen  409 EDPEEFDPERFLDGEE-------KAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK--PKPVPE  479 (497)
T ss_pred             CChhhcCccccCCCCC-------cCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC--ceeeeE
Confidence             999999999997522       1133468999999999999999999999999999999999999887654  355678


Q ss_pred             ceecccCCeeEEeecCCC
Q 047776          504 FTKVMKTPLKAHIHPRSK  521 (521)
Q Consensus       504 ~~~~~~~~~~v~~~~r~~  521 (521)
                      .++++++|++|++++|..
T Consensus       480 ~~l~~~~gl~v~~~~r~~  497 (497)
T KOG0157|consen  480 LTLRPKNGLKVKLRPRGS  497 (497)
T ss_pred             EEEEecCCeEEEEEeCCC
Confidence            999999999999999963


No 15 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.4e-75  Score=584.10  Aligned_cols=459  Identities=22%  Similarity=0.314  Sum_probs=354.9

Q ss_pred             CCCCCCCCCCCCCCCCcccchhhhhhc----------------CCCchHHHHHHHHhcCCeEEEEeCCccEEEecCHHHH
Q 047776           27 SKYFNYKLPPGPWNFPIIGNILLARKS----------------VLDLEPMIHDLHKKFGPATTLHIGFRPVIFICDRSLA   90 (521)
Q Consensus        27 ~~~~~~~~~Pgp~~~p~lG~~~~~~~~----------------~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dpe~i   90 (521)
                      +.++..+.||||+++|++||++.+...                ..+....+.+|+++|||+|++++|+.++|+++||+++
T Consensus        36 ~~~~~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v  115 (516)
T PLN02290         36 KKIMERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELI  115 (516)
T ss_pred             HHHHHHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHH
Confidence            334455679999999999999887421                0233346789999999999999999999999999999


Q ss_pred             HHHHHhCCccccCCCCCcc--ceeeeccCCcceeccCCChhHHHHHHHHHhhhcChhhHhhhHHHHHHHHHHHHHHHHHh
Q 047776           91 HQALIQNGAVFSGRPPAGA--VVKITSANQHNINSASYGPNWRLLRRNLISEIIHPSRLKSYSHARKWVLQILIDGLNLQ  168 (521)
Q Consensus        91 ~~v~~~~~~~f~~~~~~~~--~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~  168 (521)
                      ++++.++ ..+..++....  ....++   .++++ .+|+.|+++||.+. +.|+..+++.+.+.+.++++.+++.+.+.
T Consensus       116 ~~il~~~-~~~~~r~~~~~~~~~~~~g---~~l~~-~~g~~Wk~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~  189 (516)
T PLN02290        116 KELLTKY-NTVTGKSWLQQQGTKHFIG---RGLLM-ANGADWYHQRHIAA-PAFMGDRLKGYAGHMVECTKQMLQSLQKA  189 (516)
T ss_pred             HHHHhcC-CCCCCCcchhhhHHHHHhc---CCccc-cCchHHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999766 34444443211  111222   35544 47999999999987 88999999999999999999999999765


Q ss_pred             hcccCCCCCcccchHHHHHHHHHHHHHHhhhcCcCChHhHHHHHHHHHHHHHhccccccccccchhhhhhhhhhhHHHHH
Q 047776          169 AVNNGDRDDRAVKLRDHIQFAMFCLLVLMCFGDKLDEKKIREVEDVQRLMMLNTRRFNVLNFWPRVTKFVLRKLWGEFFE  248 (521)
Q Consensus       169 ~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~  248 (521)
                      ...    ++..+|+.+.+..+++|+++.++||.+++..  +.+......+............+|++.. ++....+....
T Consensus       190 ~~~----~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~p~~~~~~~~~  262 (516)
T PLN02290        190 VES----GQTEVEIGEYMTRLTADIISRTEFDSSYEKG--KQIFHLLTVLQRLCAQATRHLCFPGSRF-FPSKYNREIKS  262 (516)
T ss_pred             Hhc----CCceEEhHHHHHHHHHHHHHHHHcCCccccc--hHHHHHHHHHHHHHHHhhhhhcCchhhh-CCChhHHHHHH
Confidence            431    2357999999999999999999999987432  1122222222111111111112343322 12222334455


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccccccchhhhhhhHHHHHhcCCCc--cCCCCCHHHHHHHHHHHhhhcccchHHHHH
Q 047776          249 ILKKQESVLLPLIRDRRRMKEEGLSQAKEDENYVLAYVDTLFDLHLPE--ENRKLQENEIMSLCSEFLVAGTDTTSNALQ  326 (521)
Q Consensus       249 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~--~~~~ls~~~i~~~~~~~~~ag~~tt~~~l~  326 (521)
                      ..+.+.+++.+.|+++++..+.+.     ......|+++.+++....+  ++..++++++.+++.++++||+|||+++++
T Consensus       263 ~~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~  337 (516)
T PLN02290        263 LKGEVERLLMEIIQSRRDCVEIGR-----SSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLT  337 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccc-----CCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHH
Confidence            667788888888888776543211     0112348999998754321  233589999999999999999999999999


Q ss_pred             HHHHHHhcCChHHHHHHHHHhhhcCCccccccchhhhccChhhHHHHHhhhcCCCCCcccCccccccceeeccEEecCCc
Q 047776          327 WVMANLVKYPDIQEKVFKEIKGVVGDEEIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMVLNGFYFPKNA  406 (521)
Q Consensus       327 ~~l~~L~~~p~~q~klr~Ei~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~  406 (521)
                      |++++|++||++|+|+|+|+++++++   ..++++++++||||+|||+||||++|+++. ++|.+.+|++++||.|||||
T Consensus       338 ~~l~~L~~~P~vq~kl~~Ei~~v~~~---~~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP~Gt  413 (516)
T PLN02290        338 WTLMLLASNPTWQDKVRAEVAEVCGG---ETPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIPKGL  413 (516)
T ss_pred             HHHHHHhcCHHHHHHHHHHHHHHhCC---CCCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEEECCCC
Confidence            99999999999999999999999986   468999999999999999999999999994 79999999999999999999


Q ss_pred             EEEEcccccccCCCCCC-CCCCCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHHc
Q 047776          407 IINFMVAEMGCWDSEVW-DDPTSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYFVANLIWH  485 (521)
Q Consensus       407 ~v~~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~  485 (521)
                      .|+++.|++| |||++| +||++|+||||++.+.          .....++|||.|+|.|+|++||++|+++++++|+++
T Consensus       414 ~V~~~~~~~~-rdp~~~~~dP~~F~PeRfl~~~~----------~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~  482 (516)
T PLN02290        414 SIWIPVLAIH-HSEELWGKDANEFNPDRFAGRPF----------APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISK  482 (516)
T ss_pred             EEEecHHHhc-CChhhhCCChhhcCccccCCCCC----------CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHh
Confidence            9999999999 999999 8999999999995411          113469999999999999999999999999999999


Q ss_pred             cEEEecCCCCCcccccccceecccCCeeEEeecCC
Q 047776          486 YEWKAVDGDEVDFEEKQEFTKVMKTPLKAHIHPRS  520 (521)
Q Consensus       486 f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  520 (521)
                      |++++.++.+.  ......+..|+++++|++++|+
T Consensus       483 f~~~~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~  515 (516)
T PLN02290        483 FSFTISDNYRH--APVVVLTIKPKYGVQVCLKPLN  515 (516)
T ss_pred             ceEeeCCCccc--CccceeeecCCCCCeEEEEeCC
Confidence            99998776321  2233578889999999999986


No 16 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.7e-75  Score=535.35  Aligned_cols=459  Identities=24%  Similarity=0.422  Sum_probs=387.6

Q ss_pred             CCCCCCCCCCCCcccchhhhhh-cCCCchHHHHHHHHhcCCeEEEE-eCCccEEEecCHHHHHHHHHhCCccccCCC-CC
Q 047776           31 NYKLPPGPWNFPIIGNILLARK-SVLDLEPMIHDLHKKFGPATTLH-IGFRPVIFICDRSLAHQALIQNGAVFSGRP-PA  107 (521)
Q Consensus        31 ~~~~~Pgp~~~p~lG~~~~~~~-~~~~~~~~~~~~~~kyG~v~~~~-~~~~~~vvv~dpe~i~~v~~~~~~~f~~~~-~~  107 (521)
                      +...+|||+++|++|.+..+.. ...+.|+....++++|||||+.. +|+.+.|.+.||++++.+++.+ ..++.|+ ..
T Consensus        48 ~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~E-G~~P~Rp~~~  126 (519)
T KOG0159|consen   48 PFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNE-GKYPFRPLLI  126 (519)
T ss_pred             ChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcC-CCCCCccccc
Confidence            5568899999999999885432 34578899999999999999999 8889999999999999999555 4668885 22


Q ss_pred             ccc---eeeeccCCcceeccCCChhHHHHHHHHHhhhcChhhHhhhHHHHHHHHHHHHHHHHHhhcccCCCCCcccchHH
Q 047776          108 GAV---VKITSANQHNINSASYGPNWRLLRRNLISEIIHPSRLKSYSHARKWVLQILIDGLNLQAVNNGDRDDRAVKLRD  184 (521)
Q Consensus       108 ~~~---~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~  184 (521)
                      +.+   .+.++. ..|++ ..+|+.|.+.|..+++..++++.++.|.+.+++++++++..+....+.  .....+.|+.+
T Consensus       127 ~~w~~~rd~~~~-~~Gl~-~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~--~~~~~~~D~~~  202 (519)
T KOG0159|consen  127 EPWVAYRDFRGG-VCGLF-LLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDP--ERGELVPDFAQ  202 (519)
T ss_pred             chhhhhHHhhcc-CCCcc-cCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcc--cccccchhHHH
Confidence            222   233332 23444 458999999999999999999999999999999999999999988762  11345679999


Q ss_pred             HHHHHHHHHHHHhhhcCcCC------hHhHHHHHHHHHHHHHhccccccccccchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 047776          185 HIQFAMFCLLVLMCFGDKLD------EKKIREVEDVQRLMMLNTRRFNVLNFWPRVTKFVLRKLWGEFFEILKKQESVLL  258 (521)
Q Consensus       185 ~~~~~~~~~~~~~~fG~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~  258 (521)
                      .+.++++..++.++||.+++      ++..+.+.++...++.....   +.+.|.|.+.+..+.|+++.++.+.+.++..
T Consensus       203 ~l~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~---l~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~  279 (519)
T KOG0159|consen  203 ELYRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQ---LMLMPSLWRYFPTKVWKDFVRAWDQIFDVGD  279 (519)
T ss_pred             HHHHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHH---HHhcchHHHhCCChHHHHHHHHHHHHHHHHH
Confidence            99999999999999999993      35567777777777765443   3456777777888899999999999999999


Q ss_pred             HHHHHHHHHHHhcccccccchhhhhhhHHHHHhcCCCccCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcCChH
Q 047776          259 PLIRDRRRMKEEGLSQAKEDENYVLAYVDTLFDLHLPEENRKLQENEIMSLCSEFLVAGTDTTSNALQWVMANLVKYPDI  338 (521)
Q Consensus       259 ~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~  338 (521)
                      .+|++..+..++.....   .+....++..+.+.       .++.+++..++.+++.||+||||.++.|+||+|++||++
T Consensus       280 ~~Id~~l~~l~~~~~~~---~~~~~~l~~~L~~~-------~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~  349 (519)
T KOG0159|consen  280 KYIDNALEELEKQDSAG---SEYTGSLLELLLRK-------ELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEV  349 (519)
T ss_pred             HHHHHHHHHHHhccccc---cchhHHHHHHHHHc-------cCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHH
Confidence            99999999886622211   12223455555443       379999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhcCCccccccchhhhccChhhHHHHHhhhcCCCCCcccCccccccceeeccEEecCCcEEEEcccccccC
Q 047776          339 QEKVFKEIKGVVGDEEIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMVLNGFYFPKNAIINFMVAEMGCW  418 (521)
Q Consensus       339 q~klr~Ei~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~~  418 (521)
                      |++|++|+.+++.+.. ..++.+++.+||||.||||||+||||.+|+ ..|...+|.+++||.|||||.|.++.+.+. +
T Consensus       350 Q~~L~~Ei~~~~p~~~-~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~-~~R~l~~D~vL~gY~vPagT~V~l~~~~~~-r  426 (519)
T KOG0159|consen  350 QQRLREEILAVLPSGN-SELTQKALTNMPYLRACIKETLRLYPVVPG-NGRVLPKDLVLSGYHVPAGTLVVLFLYVLG-R  426 (519)
T ss_pred             HHHHHHHHHhhCCCcc-cccchHHHhhCHHHHHHHHhhhceeccccc-cccccchhceeccceecCCCeEEEeehhhc-c
Confidence            9999999999998742 789999999999999999999999999995 679999999999999999999999999999 9


Q ss_pred             CCCCCCCCCCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHHccEEEecCCCCCcc
Q 047776          419 DSEVWDDPTSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYFVANLIWHYEWKAVDGDEVDF  498 (521)
Q Consensus       419 d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~  498 (521)
                      ||++|++|++|+|||||+++.        ...+++.++|||.|+|+|+||+||++|+.++|++|+++|+++...+.++  
T Consensus       427 ~~~~F~~p~~F~PeRWL~~~~--------~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~pv--  496 (519)
T KOG0159|consen  427 NPAYFPDPEEFLPERWLKPST--------KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEPV--  496 (519)
T ss_pred             ChhhCCCccccChhhhccccc--------CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCCc--
Confidence            999999999999999998831        2345789999999999999999999999999999999999998876554  


Q ss_pred             cccccceecccCCeeEEeecCC
Q 047776          499 EEKQEFTKVMKTPLKAHIHPRS  520 (521)
Q Consensus       499 ~~~~~~~~~~~~~~~v~~~~r~  520 (521)
                      +....++..|..++..++.+|+
T Consensus       497 ~~~~~~il~P~~~l~f~f~~r~  518 (519)
T KOG0159|consen  497 EYVYRFILVPNRPLRFKFRPRN  518 (519)
T ss_pred             cceeEEEEcCCCCcceeeeeCC
Confidence            5556788999999999999986


No 17 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=9.7e-75  Score=573.80  Aligned_cols=449  Identities=19%  Similarity=0.298  Sum_probs=343.6

Q ss_pred             CCCCCCCCCCCCCCcccchhhhhh--cCCCchHHHHHHHHhcCCeEEEEeCCccEEEecCHHHHHHHHHhCCccccCCCC
Q 047776           29 YFNYKLPPGPWNFPIIGNILLARK--SVLDLEPMIHDLHKKFGPATTLHIGFRPVIFICDRSLAHQALIQNGAVFSGRPP  106 (521)
Q Consensus        29 ~~~~~~~Pgp~~~p~lG~~~~~~~--~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dpe~i~~v~~~~~~~f~~~~~  106 (521)
                      .++.+.||||+++|++||++.+..  ....++.++.+++++||++|++++|+.++|+++||+++++|+++++..|+.+..
T Consensus        34 ~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~  113 (490)
T PLN02500         34 QKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYP  113 (490)
T ss_pred             cCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCc
Confidence            456678999999999999876532  124567889999999999999999999999999999999999887777754422


Q ss_pred             CccceeeeccCCcceeccCCChhHHHHHHHHHhhhcChhhHhh-hHHHHHHHHHHHHHHHHHhhcccCCCCCcccchHHH
Q 047776          107 AGAVVKITSANQHNINSASYGPNWRLLRRNLISEIIHPSRLKS-YSHARKWVLQILIDGLNLQAVNNGDRDDRAVKLRDH  185 (521)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~  185 (521)
                      .. ....++.  .++++. +|+.|+.+|+.+. +.|++.+++. +.+.+.+.+..+++.+..         +..+|+.+.
T Consensus       114 ~~-~~~~~g~--~~~~~~-~g~~wr~~Rk~~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~~~---------~~~vd~~~~  179 (490)
T PLN02500        114 RS-IGGILGK--WSMLVL-VGDMHRDMRSISL-NFLSHARLRTHLLKEVERHTLLVLDSWKE---------NSTFSAQDE  179 (490)
T ss_pred             hH-HHHHhCc--cccccc-CCHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHhCC---------CCCEEehHH
Confidence            21 1223332  244444 7999999999987 8899998887 466777777777776532         457899999


Q ss_pred             HHHHHHHHHHHhhhcCcCChHhHHHHHHHHHHHHHhccccccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 047776          186 IQFAMFCLLVLMCFGDKLDEKKIREVEDVQRLMMLNTRRFNVLNFWPRVTKFVLRKLWGEFFEILKKQESVLLPLIRDRR  265 (521)
Q Consensus       186 ~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  265 (521)
                      +.++++|+++.++||.+.++.....+.............  ....+|.       ..+++..+..+.+.+++.+++++++
T Consensus       180 ~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~-------~~~~~~~~~~~~~~~~~~~~i~~~~  250 (490)
T PLN02500        180 AKKFTFNLMAKHIMSMDPGEEETEQLKKEYVTFMKGVVS--APLNFPG-------TAYRKALKSRATILKFIERKMEERI  250 (490)
T ss_pred             HHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHhhhhc--chhcCCC-------cccHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999887543333333322222221111  0011222       1234455667788888888888877


Q ss_pred             HHHHhcccccccchhhhhhhHHHHHhcCCCccCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcCChHHHHHHHH
Q 047776          266 RMKEEGLSQAKEDENYVLAYVDTLFDLHLPEENRKLQENEIMSLCSEFLVAGTDTTSNALQWVMANLVKYPDIQEKVFKE  345 (521)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~klr~E  345 (521)
                      +..+.+.   .  .....|+++.+++.      ..+|++++.+++.++++||+|||+++++|++++|+.||++|+|+|+|
T Consensus       251 ~~~~~~~---~--~~~~~d~l~~ll~~------~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~E  319 (490)
T PLN02500        251 EKLKEED---E--SVEEDDLLGWVLKH------SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREE  319 (490)
T ss_pred             Hhhhccc---C--CCCcchHHHHHHhc------cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHH
Confidence            6543210   0  01124899998863      24899999999999999999999999999999999999999999999


Q ss_pred             HhhhcCC---ccccccchhhhccChhhHHHHHhhhcCCCCCcccCccccccceeeccEEecCCcEEEEcccccccCCCCC
Q 047776          346 IKGVVGD---EEIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMVLNGFYFPKNAIINFMVAEMGCWDSEV  422 (521)
Q Consensus       346 i~~~~~~---~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~~d~~~  422 (521)
                      ++++.+.   .+++.++.+++++||||+|||+||||++|++|. ++|.+.+|++++||.|||||.|+++.|++| |||++
T Consensus       320 i~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~-~~R~~~~d~~~~G~~IPkGt~V~~~~~~~h-rdp~~  397 (490)
T PLN02500        320 HLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRF-LHRKALKDVRYKGYDIPSGWKVLPVIAAVH-LDSSL  397 (490)
T ss_pred             HHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccC-eeeEeCCCceeCCEEECCCCEEEechhhcc-cCccc
Confidence            9998742   111568999999999999999999999999996 589999999999999999999999999999 99999


Q ss_pred             CCCCCCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHHccEEEecCCCCCcccccc
Q 047776          423 WDDPTSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYFVANLIWHYEWKAVDGDEVDFEEKQ  502 (521)
Q Consensus       423 ~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~  502 (521)
                      |+||++|+||||++++++ ++.......++..++|||+|+|.|+|++||++|+++++++|+++|++++.++... . . .
T Consensus       398 ~~dP~~F~PeRfl~~~~~-~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~-~-~-~  473 (490)
T PLN02500        398 YDQPQLFNPWRWQQNNNR-GGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQA-F-A-F  473 (490)
T ss_pred             CCCccccChhhccCCCcc-cccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCcc-e-e-c
Confidence            999999999999975321 1100000123467999999999999999999999999999999999998776542 1 1 2


Q ss_pred             cceecccCCeeEEeec
Q 047776          503 EFTKVMKTPLKAHIHP  518 (521)
Q Consensus       503 ~~~~~~~~~~~v~~~~  518 (521)
                      .. ..++.+++|++++
T Consensus       474 ~~-~~~~~~l~~~~~~  488 (490)
T PLN02500        474 PF-VDFPKGLPIRVRR  488 (490)
T ss_pred             cc-ccCCCCceEEEEe
Confidence            22 3557899999876


No 18 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=1.3e-73  Score=565.16  Aligned_cols=470  Identities=24%  Similarity=0.430  Sum_probs=349.2

Q ss_pred             CCCCCCCCCCcccchhhhhhcCCCchHHHHHHHHhc-CCeEEEEeCCccEEEecCHHHHHHHHHhCCccccCCCCCccce
Q 047776           33 KLPPGPWNFPIIGNILLARKSVLDLEPMIHDLHKKF-GPATTLHIGFRPVIFICDRSLAHQALIQNGAVFSGRPPAGAVV  111 (521)
Q Consensus        33 ~~~Pgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~ky-G~v~~~~~~~~~~vvv~dpe~i~~v~~~~~~~f~~~~~~~~~~  111 (521)
                      ..||||+++|++||++.+.... ....+++++.++| |+||++++|+.++|+|+||+.+++++++++..|+.++..... 
T Consensus        40 ~~PPgp~~~P~iGnl~~l~~~~-~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~-  117 (534)
T PLN03018         40 QLPPGPPGWPILGNLPELIMTR-PRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIM-  117 (534)
T ss_pred             CCCcCCCCCCeeccHHHhccCC-CcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhh-
Confidence            4799999999999998874211 1123566666666 799999999999999999999999999888889988765422 


Q ss_pred             eeeccCCcceeccCCChhHHHHHHHHHhhhcChhhHhhhHHHHHHHHHHHHHHHHHhhcccCCCCCcccchHHHHHHHHH
Q 047776          112 KITSANQHNINSASYGPNWRLLRRNLISEIIHPSRLKSYSHARKWVLQILIDGLNLQAVNNGDRDDRAVKLRDHIQFAMF  191 (521)
Q Consensus       112 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~  191 (521)
                      ..++.+..++++..+|+.|+.+|+.+.+.+++......+.....++++.+++.+.+...     .+.++|+.+.+.++++
T Consensus       118 ~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-----~~~~vd~~~~~~~~t~  192 (534)
T PLN03018        118 ETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQ-----RSETVDVRELSRVYGY  192 (534)
T ss_pred             hhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcc-----cCCceeHHHHHHHHHH
Confidence            33444334566666799999999999844445554555556666778899999876433     2457999999999999


Q ss_pred             HHHHHhhhcCcCCh---------HhHHHHHHHHHHHHHhccc---cccccccc-hhhhhhhhhhhHHHHHHHHHHHHHHH
Q 047776          192 CLLVLMCFGDKLDE---------KKIREVEDVQRLMMLNTRR---FNVLNFWP-RVTKFVLRKLWGEFFEILKKQESVLL  258 (521)
Q Consensus       192 ~~~~~~~fG~~~~~---------~~~~~~~~~~~~~~~~~~~---~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~  258 (521)
                      |+++.++||.+++.         +....+.............   ....+++| ++..+.......+.....+.+.+++.
T Consensus       193 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  272 (534)
T PLN03018        193 AVTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNN  272 (534)
T ss_pred             HHHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHH
Confidence            99999999998631         1111122222222221111   11122333 32221111122233345566778888


Q ss_pred             HHHHHHHHHHHhcccccccchhhhhhhHHHHHhcCCCccCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcCChH
Q 047776          259 PLIRDRRRMKEEGLSQAKEDENYVLAYVDTLFDLHLPEENRKLQENEIMSLCSEFLVAGTDTTSNALQWVMANLVKYPDI  338 (521)
Q Consensus       259 ~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~  338 (521)
                      ++++++++....   ..  +.....|+++.+++...++....++++++.+++.++++||+|||+++++|++++|+.||++
T Consensus       273 ~~i~~~~~~~~~---~~--~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~  347 (534)
T PLN03018        273 PIIDERVELWRE---KG--GKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEI  347 (534)
T ss_pred             HHHHHHHHHhhh---cc--CCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHH
Confidence            888887654321   00  1111248999999765321112489999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhcCCccccccchhhhccChhhHHHHHhhhcCCCCCcccCccccccceeeccEEecCCcEEEEcccccccC
Q 047776          339 QEKVFKEIKGVVGDEEIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMVLNGFYFPKNAIINFMVAEMGCW  418 (521)
Q Consensus       339 q~klr~Ei~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~~  418 (521)
                      |+|+++||+++++.+  +.++.+++.+||||+|||+||||++|++|...+|.+.+|++++||.||||+.|.++.|++| |
T Consensus       348 q~kl~~Ei~~v~~~~--~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~-~  424 (534)
T PLN03018        348 LRKALKELDEVVGKD--RLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLG-R  424 (534)
T ss_pred             HHHHHHHHHHHhCCC--CCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhc-C
Confidence            999999999999765  6789999999999999999999999999977789999999999999999999999999999 9


Q ss_pred             CCCCCCCCCCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHHccEEEecCCC-CCc
Q 047776          419 DSEVWDDPTSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYFVANLIWHYEWKAVDGD-EVD  497 (521)
Q Consensus       419 d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~-~~~  497 (521)
                      ||++|+||++|+||||++.++.... . ........++|||+|+|.|+|++||++|+++++++|+++|++++.++. +++
T Consensus       425 dp~~~~~p~~F~PeRfl~~~~~~~~-~-~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~  502 (534)
T PLN03018        425 NPKIWKDPLVYEPERHLQGDGITKE-V-TLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLS  502 (534)
T ss_pred             CcccCCCccccCCccCCCCCCcccc-c-cccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCC
Confidence            9999999999999999975321000 0 001124679999999999999999999999999999999999987653 333


Q ss_pred             ccccccceecccCCeeEEeecCC
Q 047776          498 FEEKQEFTKVMKTPLKAHIHPRS  520 (521)
Q Consensus       498 ~~~~~~~~~~~~~~~~v~~~~r~  520 (521)
                      .....+ +...+.+++|++++|.
T Consensus       503 ~~~~~~-~~~~p~~~~v~~~~R~  524 (534)
T PLN03018        503 LEEDDA-SLLMAKPLLLSVEPRL  524 (534)
T ss_pred             cccccc-ceecCCCeEEEEEecc
Confidence            322334 3445789999999983


No 19 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1.3e-73  Score=563.43  Aligned_cols=472  Identities=21%  Similarity=0.295  Sum_probs=353.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCcccchhhhhhcCCCchHHHHHHHHhcCCeEE---EEeCCccEE
Q 047776            6 VILISLCISALIKAFIHLLRPSKYFNYKLPPGPWNFPIIGNILLARKSVLDLEPMIHDLHKKFGPATT---LHIGFRPVI   82 (521)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~---~~~~~~~~v   82 (521)
                      ++.+++..+...+.++++.++       ..|||+++|++||++.+..+.....+++.+...+||..++   .++|+.+++
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~-------~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~v   83 (500)
T PLN02169         11 VAFIFFLVCLFTCFFIHKKPH-------GQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDML   83 (500)
T ss_pred             HHHHHHHHHHHHHHHHHhccC-------CCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeE
Confidence            455666666666666655443       3799999999999987765434445556666566886655   678999999


Q ss_pred             EecCHHHHHHHHHhCCccccCCCCCccceeeeccCCcceeccCCChhHHHHHHHHHhhhcChhhHhhh--HHHHHHHHHH
Q 047776           83 FICDRSLAHQALIQNGAVFSGRPPAGAVVKITSANQHNINSASYGPNWRLLRRNLISEIIHPSRLKSY--SHARKWVLQI  160 (521)
Q Consensus        83 vv~dpe~i~~v~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~--~~~~~~~~~~  160 (521)
                      +|+||+.+++|+.++...|++++........++   .+++++ +|+.|+.+||.+. +.|+...+..+  .+.+.+.++.
T Consensus        84 vv~dpe~i~~il~~~~~~~~k~~~~~~~~~~~g---~gl~~~-~g~~Wr~~Rk~l~-p~F~~~~~~~~~~~~~~~~~~~~  158 (500)
T PLN02169         84 FTADPKNIHHILSSNFGNYPKGPEFKKIFDVLG---EGILTV-DFELWEDLRKSNH-ALFHNQDFIELSLSSNKSKLKEG  158 (500)
T ss_pred             EEcCHHHHHHHHhhCcccCCCcHHHHHHHHhhc---Cccccc-CcHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHH
Confidence            999999999999888777877653322223233   366555 7999999999987 99999887643  3667777888


Q ss_pred             HHHHHHHhhcccCCCCCcccchHHHHHHHHHHHHHHhhhcCcCChHh----HHHHHHHHHHHHHhccccccccccchhh-
Q 047776          161 LIDGLNLQAVNNGDRDDRAVKLRDHIQFAMFCLLVLMCFGDKLDEKK----IREVEDVQRLMMLNTRRFNVLNFWPRVT-  235 (521)
Q Consensus       161 l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~l~-  235 (521)
                      +++.+.+...     ++..+|+.+.+.++++|+++.++||.+.+...    ...+............   ...+.|++. 
T Consensus       159 l~~~l~~~~~-----~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~  230 (500)
T PLN02169        159 LVPFLDNAAH-----ENIIIDLQDVFMRFMFDTSSILMTGYDPMSLSIEMLEVEFGEAADIGEEAIY---YRHFKPVILW  230 (500)
T ss_pred             HHHHHHHHHh-----cCCeEeHHHHHHHHHHHHHHhheeCCCccccCCCCCCCHHHHHHHHHHHHHH---hHHhccHHHH
Confidence            8888876543     36689999999999999999999998764211    1223333222221111   111223221 


Q ss_pred             ---hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhhhhhHHHHHhcCCCc--cCCCCCHHHHHHHH
Q 047776          236 ---KFVLRKLWGEFFEILKKQESVLLPLIRDRRRMKEEGLSQAKEDENYVLAYVDTLFDLHLPE--ENRKLQENEIMSLC  310 (521)
Q Consensus       236 ---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~--~~~~ls~~~i~~~~  310 (521)
                         .++.....++..+..+.+.+++.++|+++++...+..   + ..+...|+++.+++....+  .+..++++++.+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~---~-~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~  306 (500)
T PLN02169        231 RLQNWIGIGLERKMRTALATVNRMFAKIISSRRKEEISRA---E-TEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVI  306 (500)
T ss_pred             HHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhccc---c-ccCCCcCHHHHHHhccccccccccCCChHHHHHHH
Confidence               1122233456677888899999999988765422100   0 0111248899888764321  12347899999999


Q ss_pred             HHHhhhcccchHHHHHHHHHHHhcCChHHHHHHHHHhhhcCCccccccchhhhccChhhHHHHHhhhcCCCCCcccCccc
Q 047776          311 SEFLVAGTDTTSNALQWVMANLVKYPDIQEKVFKEIKGVVGDEEIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRA  390 (521)
Q Consensus       311 ~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~klr~Ei~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~  390 (521)
                      .++++||+|||+++++|++++|+.||++|+|+++||++++        +.+++++||||+|||+||||++|++|.. .|.
T Consensus       307 ~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~--------~~~dl~~L~Yl~avi~EtLRl~P~vp~~-~r~  377 (500)
T PLN02169        307 FSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF--------DNEDLEKLVYLHAALSESMRLYPPLPFN-HKA  377 (500)
T ss_pred             HHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC--------CHHHHhcCHHHHHHHHHHHhcCCCCCcC-cee
Confidence            9999999999999999999999999999999999999763        5789999999999999999999999965 566


Q ss_pred             ccccee-eccEEecCCcEEEEcccccccCCCCCC-CCCCCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcch
Q 047776          391 LKQDMV-LNGFYFPKNAIINFMVAEMGCWDSEVW-DDPTSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQ  468 (521)
Q Consensus       391 ~~~d~~-i~g~~ip~g~~v~~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~  468 (521)
                      +.+|.+ ++|+.||||+.|.++.|++| |||++| +||++|+||||+++++   .   .....+..|+|||+|+|+|+|+
T Consensus       378 ~~~d~~~~~G~~IpkGt~v~i~~~~ih-rd~~~w~~dP~~F~PeRfl~~~~---~---~~~~~~~~~lPFG~GpR~CiG~  450 (500)
T PLN02169        378 PAKPDVLPSGHKVDAESKIVICIYALG-RMRSVWGEDALDFKPERWISDNG---G---LRHEPSYKFMAFNSGPRTCLGK  450 (500)
T ss_pred             cCCCCCccCCEEECCCCEEEEcHHHhh-CCccccCCChhhcCccccCCCCC---C---ccCCCCccccCCCCCCCCCcCH
Confidence            655555 59999999999999999999 999999 8999999999997532   1   0111257899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHccEEEecCCCCCcccccccceecccCCeeEEeecC
Q 047776          469 DLAMLHLEYFVANLIWHYEWKAVDGDEVDFEEKQEFTKVMKTPLKAHIHPR  519 (521)
Q Consensus       469 ~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  519 (521)
                      +||++|+++++++|+++|++++.++.++  ....+.+++++++++|++++|
T Consensus       451 ~~A~~e~k~~la~ll~~f~~~~~~~~~~--~~~~~~~l~~~~gl~l~l~~~  499 (500)
T PLN02169        451 HLALLQMKIVALEIIKNYDFKVIEGHKI--EAIPSILLRMKHGLKVTVTKK  499 (500)
T ss_pred             HHHHHHHHHHHHHHHHHCEEEEcCCCCc--ccccceEEecCCCEEEEEEeC
Confidence            9999999999999999999998765543  334567889999999999987


No 20 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=4.4e-74  Score=572.06  Aligned_cols=455  Identities=30%  Similarity=0.521  Sum_probs=366.8

Q ss_pred             CCCCCCCCcccchhhhhhcCCCchHHHHHHHHhcCCeEEEEeCCccEEEecCHHHHHHHHHhCCccccCCCCCccceeee
Q 047776           35 PPGPWNFPIIGNILLARKSVLDLEPMIHDLHKKFGPATTLHIGFRPVIFICDRSLAHQALIQNGAVFSGRPPAGAVVKIT  114 (521)
Q Consensus        35 ~Pgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dpe~i~~v~~~~~~~f~~~~~~~~~~~~~  114 (521)
                      ||||+++|++||++.+.+ ..+++..+.+++++|||||++++++.++++|+||+.+++|+.++...|+.++.........
T Consensus         1 Ppgp~~~p~~G~~~~~~~-~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~   79 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRR-KGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFR   79 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHT-THHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcC-CCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhcccccccccccccccccccccccc
Confidence            799999999999999974 4578899999999999999999999999999999999999977766676653322222211


Q ss_pred             -ccCCcceeccCCChhHHHHHHHHHhhhcChh-hHhhhHHHHHHHHHHHHHHHHHhhcccCCCCCcccchHHHHHHHHHH
Q 047776          115 -SANQHNINSASYGPNWRLLRRNLISEIIHPS-RLKSYSHARKWVLQILIDGLNLQAVNNGDRDDRAVKLRDHIQFAMFC  192 (521)
Q Consensus       115 -~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~-~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~  192 (521)
                       ...+.++++. +|+.|+.+|+.+. +.|+.. .+ .+.+.+.+.++.+++.+.+...     ....+|+.+.++.+++|
T Consensus        80 ~~~~~~~l~~~-~~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~-----~~~~vd~~~~~~~~~~d  151 (463)
T PF00067_consen   80 GPFGGKGLFFS-DGERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKKAG-----SSGPVDLFDWLRRFALD  151 (463)
T ss_dssp             HHHTTTSSTTS-SHHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTT-----SESEEEHHHHHHHHHHH
T ss_pred             ccccccccccc-ccccccccccccc-ccccccccc-cccccccccccccccccccccc-----ccceeeeeccccccccc
Confidence             1122355444 6899999999988 778877 66 8999999999999999998765     23479999999999999


Q ss_pred             HHHHhhhcCcCC---hHhHHHHHHHHHHHHHhccc--cccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 047776          193 LLVLMCFGDKLD---EKKIREVEDVQRLMMLNTRR--FNVLNFWPRVTKFVLRKLWGEFFEILKKQESVLLPLIRDRRRM  267 (521)
Q Consensus       193 ~~~~~~fG~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  267 (521)
                      +++.++||.+++   ++....+.+....+......  ..+...+|++. +++...++...+..+.+.+++.++++++++.
T Consensus       152 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  230 (463)
T PF00067_consen  152 VIGRVLFGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLK-YLPTPLFRRFKRARDRLRKYIKEIIEERREE  230 (463)
T ss_dssp             HHHHHHHSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC-TSSHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             ccccccccceeeeccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccc
Confidence            999999999863   44344455555555433221  12334455332 3445566677777888899999999998887


Q ss_pred             HHhcccccccchhhhhhhHHHHHhcC-CCccCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcCChHHHHHHHHH
Q 047776          268 KEEGLSQAKEDENYVLAYVDTLFDLH-LPEENRKLQENEIMSLCSEFLVAGTDTTSNALQWVMANLVKYPDIQEKVFKEI  346 (521)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~l~~ll~~~-~~~~~~~ls~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~klr~Ei  346 (521)
                      ...+       .....|+++.+++.. ..+.+..++++++.+++.++++||+|||+.+++|++++|++||++|+||++||
T Consensus       231 ~~~~-------~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei  303 (463)
T PF00067_consen  231 LDDG-------DESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEI  303 (463)
T ss_dssp             HHSS-------SSSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred             cccc-------ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            7441       123348999999875 22122489999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCccccccchhhhccChhhHHHHHhhhcCCCCCcccCccccccceeeccEEecCCcEEEEcccccccCCCCCCCCC
Q 047776          347 KGVVGDEEIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMVLNGFYFPKNAIINFMVAEMGCWDSEVWDDP  426 (521)
Q Consensus       347 ~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~~d~~~~~~p  426 (521)
                      +++.+++  +.++.+++++||||+|||+||||++|+++..++|.+.+|++++||.||||+.|+++.+++| +||++|+||
T Consensus       304 ~~~~~~~--~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~-~d~~~~~dp  380 (463)
T PF00067_consen  304 DSVLGDG--REITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALH-RDPEYFPDP  380 (463)
T ss_dssp             HHHTTTS--SSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHT-TSTTTSSST
T ss_pred             ccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccc
Confidence            9999665  6799999999999999999999999999977889999999999999999999999999999 999999999


Q ss_pred             CCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHHccEEEecCCCCCccccccccee
Q 047776          427 TSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYFVANLIWHYEWKAVDGDEVDFEEKQEFTK  506 (521)
Q Consensus       427 ~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~  506 (521)
                      ++|+||||++.+.       ....++..++|||.|+|.|+|++||++|+++++++||++|+|++.++.............
T Consensus       381 ~~F~P~R~~~~~~-------~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~  453 (463)
T PF00067_consen  381 DEFDPERFLDERG-------ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFL  453 (463)
T ss_dssp             TS--TTGGBTTTS-------TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSS
T ss_pred             ccccccccccccc-------ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceE
Confidence            9999999998732       112345789999999999999999999999999999999999998766544444433456


Q ss_pred             cccCCeeEEe
Q 047776          507 VMKTPLKAHI  516 (521)
Q Consensus       507 ~~~~~~~v~~  516 (521)
                      .++.+++|++
T Consensus       454 ~~~~~~~~~~  463 (463)
T PF00067_consen  454 LPPKPLKVKF  463 (463)
T ss_dssp             EEESSSEEEE
T ss_pred             eeCCCcEEeC
Confidence            6788998875


No 21 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=1.6e-72  Score=553.30  Aligned_cols=431  Identities=22%  Similarity=0.316  Sum_probs=338.9

Q ss_pred             CCCCCCCCCCCcccchhhhhhcCCCchHHHHHHHHhcCCeEEEEeCCccEEEecCHHHHHHHHHhCCccccCCCCCccce
Q 047776           32 YKLPPGPWNFPIIGNILLARKSVLDLEPMIHDLHKKFGPATTLHIGFRPVIFICDRSLAHQALIQNGAVFSGRPPAGAVV  111 (521)
Q Consensus        32 ~~~~Pgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dpe~i~~v~~~~~~~f~~~~~~~~~~  111 (521)
                      ...||||+++|++||++.+.+   ++..++++++++||++|++++|+.++++++||+.++++++++...|..+... ...
T Consensus        30 ~~~ppgp~~~P~~G~~~~~~~---~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~-~~~  105 (463)
T PLN02774         30 KGLPPGTMGWPLFGETTEFLK---QGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQ-SML  105 (463)
T ss_pred             CCCCCCCCCCCchhhHHHHHH---hhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCH-HHH
Confidence            367899999999999988753   4567899999999999999999999999999999999998777666443221 122


Q ss_pred             eeeccCCcceeccCCChhHHHHHHHHHhhhcChhhHhh-hHHHHHHHHHHHHHHHHHhhcccCCCCCcccchHHHHHHHH
Q 047776          112 KITSANQHNINSASYGPNWRLLRRNLISEIIHPSRLKS-YSHARKWVLQILIDGLNLQAVNNGDRDDRAVKLRDHIQFAM  190 (521)
Q Consensus       112 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~  190 (521)
                      ..++.  .+++. .+|+.|+.+|+.+. +.|++..++. +.+.+.+.++.++++|..         ++++|+.+.+..++
T Consensus       106 ~~lg~--~~~~~-~~g~~w~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~  172 (463)
T PLN02774        106 DILGT--CNIAA-VHGSTHRYMRGSLL-SLISPTMIRDHLLPKIDEFMRSHLSGWDG---------LKTIDIQEKTKEMA  172 (463)
T ss_pred             HHhCc--cchhh-cCCHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHhhCC---------CCCEEeeHHHHHHH
Confidence            33432  24444 47999999999987 8899999886 678888888887776632         35789999999999


Q ss_pred             HHHHHHhhhcCcCChHhHHHHHHHHHHHHHhccccccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 047776          191 FCLLVLMCFGDKLDEKKIREVEDVQRLMMLNTRRFNVLNFWPRVTKFVLRKLWGEFFEILKKQESVLLPLIRDRRRMKEE  270 (521)
Q Consensus       191 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  270 (521)
                      +++++.++||.+.+.. ...+..........  ..    .+|..   ++...+++..+..+.+.+++.++++++++..  
T Consensus       173 ~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~--~~----~~~~~---lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--  240 (463)
T PLN02774        173 LLSALKQIAGTLSKPI-SEEFKTEFFKLVLG--TL----SLPID---LPGTNYRSGVQARKNIVRMLRQLIQERRASG--  240 (463)
T ss_pred             HHHHHHHHcCCCChHH-HHHHHHHHHHHhcc--cc----cCCcC---CCChhhhHHHHHHHHHHHHHHHHHHHHHhcC--
Confidence            9999999999875422 22222222211110  01    11211   1112234555677788888888888765321  


Q ss_pred             cccccccchhhhhhhHHHHHhcCCCccCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcCChHHHHHHHHHhhhc
Q 047776          271 GLSQAKEDENYVLAYVDTLFDLHLPEENRKLQENEIMSLCSEFLVAGTDTTSNALQWVMANLVKYPDIQEKVFKEIKGVV  350 (521)
Q Consensus       271 ~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~klr~Ei~~~~  350 (521)
                               ....|+++.+++...  ++..++++++.+++.++++||+|||+++++|++++|++||++|+|+|+|++++.
T Consensus       241 ---------~~~~d~l~~ll~~~~--~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~  309 (463)
T PLN02774        241 ---------ETHTDMLGYLMRKEG--NRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIR  309 (463)
T ss_pred             ---------CCcccHHHHHHhCcc--CCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence                     112389999887431  334689999999999999999999999999999999999999999999999998


Q ss_pred             CCc-cccccchhhhccChhhHHHHHhhhcCCCCCcccCccccccceeeccEEecCCcEEEEcccccccCCCCCCCCCCCC
Q 047776          351 GDE-EIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMVLNGFYFPKNAIINFMVAEMGCWDSEVWDDPTSF  429 (521)
Q Consensus       351 ~~~-~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~~d~~~~~~p~~F  429 (521)
                      +.. .++.++++++++||||+|||+|+||++|+++ .++|.+.+|++++||.||||+.|+++.+.+| |||++|+||++|
T Consensus       310 ~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~-~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~-rdp~~~~dP~~F  387 (463)
T PLN02774        310 ERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVN-GVLRKTTQDMELNGYVIPKGWRIYVYTREIN-YDPFLYPDPMTF  387 (463)
T ss_pred             hccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCC-CcccccCCCeeECCEEECCCCEEEEehHHhc-CCcccCCChhcc
Confidence            642 1256899999999999999999999999998 4679999999999999999999999999999 999999999999


Q ss_pred             CCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHHccEEEecCCCCCcccccccceeccc
Q 047776          430 RPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYFVANLIWHYEWKAVDGDEVDFEEKQEFTKVMK  509 (521)
Q Consensus       430 ~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  509 (521)
                      +||||++++.   +      . ...++|||+|+|.|+|++||++|++++++.|+++|++++.++.++.    ...++.++
T Consensus       388 ~PeRfl~~~~---~------~-~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~----~~~~~~p~  453 (463)
T PLN02774        388 NPWRWLDKSL---E------S-HNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKLM----KFPRVEAP  453 (463)
T ss_pred             CchhcCCCCc---C------C-CccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCccc----cCCCCCCC
Confidence            9999996521   0      1 1359999999999999999999999999999999999998765422    12245588


Q ss_pred             CCeeEEeec
Q 047776          510 TPLKAHIHP  518 (521)
Q Consensus       510 ~~~~v~~~~  518 (521)
                      ++++|++++
T Consensus       454 ~g~~~~~~~  462 (463)
T PLN02774        454 NGLHIRVSP  462 (463)
T ss_pred             CCceEEeee
Confidence            999999985


No 22 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=3.5e-72  Score=559.19  Aligned_cols=457  Identities=22%  Similarity=0.324  Sum_probs=340.0

Q ss_pred             CCCCCCCCCcccchhhhhhcCCCchHHHHHHHHhc---CCeEEEEeCCccEEEecCHHHHHHHHHhCCccccCCCCCccc
Q 047776           34 LPPGPWNFPIIGNILLARKSVLDLEPMIHDLHKKF---GPATTLHIGFRPVIFICDRSLAHQALIQNGAVFSGRPPAGAV  110 (521)
Q Consensus        34 ~~Pgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~ky---G~v~~~~~~~~~~vvv~dpe~i~~v~~~~~~~f~~~~~~~~~  110 (521)
                      .+|||+++|++||++.+...    +..+.+|.++|   |++|++++|+.+.++++||+.+++|+.++...|.+.+.....
T Consensus        31 ~~pgp~~~p~~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~  106 (516)
T PLN03195         31 NRKGPKSWPIIGAALEQLKN----YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSY  106 (516)
T ss_pred             ccCCCCCCCeecchHHHHhc----cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHH
Confidence            37999999999998776432    23456667777   899999999999999999999999997665566655332111


Q ss_pred             -eeeeccCCcceeccCCChhHHHHHHHHHhhhcChhhHhhhHHHH-HHHHHHHHHHHHHhhcccCCCCCcccchHHHHHH
Q 047776          111 -VKITSANQHNINSASYGPNWRLLRRNLISEIIHPSRLKSYSHAR-KWVLQILIDGLNLQAVNNGDRDDRAVKLRDHIQF  188 (521)
Q Consensus       111 -~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~  188 (521)
                       ...++   .+++. .+|+.|+.+||.+. +.|+.++++.+.+.+ .+.++.+++.+.+...     ++..+|+.+++..
T Consensus       107 ~~~~~g---~~l~~-~~g~~w~~~Rr~l~-~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~-----~~~~vd~~~~~~~  176 (516)
T PLN03195        107 MEVLLG---DGIFN-VDGELWRKQRKTAS-FEFASKNLRDFSTVVFREYSLKLSSILSQASF-----ANQVVDMQDLFMR  176 (516)
T ss_pred             HHHHhc---Ceeec-cCcHHHHHHHHhcc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCeEcHHHHHHH
Confidence             11222   24544 58999999999987 889999999998875 6667778877765432     3567999999999


Q ss_pred             HHHHHHHHhhhcCcCChHh----HHHHHHHHHHHHHhccccccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 047776          189 AMFCLLVLMCFGDKLDEKK----IREVEDVQRLMMLNTRRFNVLNFWPRVTKFVLRKLWGEFFEILKKQESVLLPLIRDR  264 (521)
Q Consensus       189 ~~~~~~~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  264 (521)
                      +++|+++.++||.+++...    ...+.+.......... ......++.+..+......+...+..+.+.+++.+.++++
T Consensus       177 ~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  255 (516)
T PLN03195        177 MTLDSICKVGFGVEIGTLSPSLPENPFAQAFDTANIIVT-LRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRR  255 (516)
T ss_pred             HHHHHHHHHHhCCCccccccCCCccHHHHHHHHHHHHHH-HHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999874211    1123222222211110 0011111111111111122344556677888888888877


Q ss_pred             HHHHHhcccccccchhhhhhhHHHHHhcCCCccCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcCChHHHHHHH
Q 047776          265 RRMKEEGLSQAKEDENYVLAYVDTLFDLHLPEENRKLQENEIMSLCSEFLVAGTDTTSNALQWVMANLVKYPDIQEKVFK  344 (521)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~klr~  344 (521)
                      ++......   ........|+++.+++...+ .+..++++++.+++.++++||+|||+++++|++++|++||++|+|||+
T Consensus       256 ~~~~~~~~---~~~~~~~~d~l~~ll~~~~~-~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~  331 (516)
T PLN03195        256 KAEMDEAR---KSGKKVKHDILSRFIELGED-PDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYS  331 (516)
T ss_pred             HHHHhccc---cccccccccHHHHHHhccCC-CCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            65532210   00111234899999975432 345699999999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCc------------------cccccchhhhccChhhHHHHHhhhcCCCCCcccCccccccceee-ccEEecCC
Q 047776          345 EIKGVVGDE------------------EIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMVL-NGFYFPKN  405 (521)
Q Consensus       345 Ei~~~~~~~------------------~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i-~g~~ip~g  405 (521)
                      |+++++++.                  ..+.++++++++||||+|||+||||++|++|.. +|.+.+|.++ +|+.||||
T Consensus       332 Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~-~r~~~~d~~~~~G~~IpkG  410 (516)
T PLN03195        332 ELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD-PKGILEDDVLPDGTKVKAG  410 (516)
T ss_pred             HHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch-hhhhccCcCcCCCcEECCC
Confidence            999987531                  014589999999999999999999999999965 5667666655 99999999


Q ss_pred             cEEEEcccccccCCCCCC-CCCCCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHH
Q 047776          406 AIINFMVAEMGCWDSEVW-DDPTSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYFVANLIW  484 (521)
Q Consensus       406 ~~v~~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~  484 (521)
                      |.|.++.|++| |||++| +||++|+||||++.+.       .....+..++|||+|+|+|+|++||++|++++++.|++
T Consensus       411 t~V~~~~~~~h-~dp~~~g~dP~~F~PeRwl~~~~-------~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~  482 (516)
T PLN03195        411 GMVTYVPYSMG-RMEYNWGPDAASFKPERWIKDGV-------FQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCR  482 (516)
T ss_pred             CEEEEehHhhc-cChhhhccChhhcCCcccCCCCC-------cCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHH
Confidence            99999999999 999999 9999999999996411       01112457999999999999999999999999999999


Q ss_pred             ccEEEecCCCCCcccccccceecccCCeeEEeecCC
Q 047776          485 HYEWKAVDGDEVDFEEKQEFTKVMKTPLKAHIHPRS  520 (521)
Q Consensus       485 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  520 (521)
                      +|++++.++.+.  ......++.++.+++|++++|.
T Consensus       483 ~f~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        483 FFKFQLVPGHPV--KYRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             hceeEecCCCcc--eeeeeeEEecCCCEEEEEEeCC
Confidence            999998765543  3334467788999999999984


No 23 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=1.2e-71  Score=556.77  Aligned_cols=449  Identities=21%  Similarity=0.262  Sum_probs=339.2

Q ss_pred             cchhhhhhcCCCchHHHHHHHHhcCCeEEEEeCCccEEEecCHHHHHHHHHhCCccccCCCCCccceeeeccCCcceecc
Q 047776           45 GNILLARKSVLDLEPMIHDLHKKFGPATTLHIGFRPVIFICDRSLAHQALIQNGAVFSGRPPAGAVVKITSANQHNINSA  124 (521)
Q Consensus        45 G~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dpe~i~~v~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~  124 (521)
                      ||+..+  ..+.++..+++|+++|||||++++|+.++++|+||+.+++|+..+...|++++.........+   .++++ 
T Consensus       143 G~l~~i--~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g---~~l~~-  216 (633)
T PLN02738        143 GSISAV--RGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMG---KGLIP-  216 (633)
T ss_pred             CcHHHh--cCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccC---Cceec-
Confidence            454444  256788999999999999999999999999999999999999877777776543221111122   24544 


Q ss_pred             CCChhHHHHHHHHHhhhcChhhHhhhHHHHHHHHHHHHHHHHHhhcccCCCCCcccchHHHHHHHHHHHHHHhhhcCcCC
Q 047776          125 SYGPNWRLLRRNLISEIIHPSRLKSYSHARKWVLQILIDGLNLQAVNNGDRDDRAVKLRDHIQFAMFCLLVLMCFGDKLD  204 (521)
Q Consensus       125 ~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~  204 (521)
                      .+|+.|+.+|+.+. +.|+...+..+.+.+.+.++.+++++.+...     .+..+|+.+.+..+++|+++.++||.+++
T Consensus       217 ~dge~wr~rRr~l~-p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~-----~g~~vdl~~~~~~lt~DVI~~~~FG~~~~  290 (633)
T PLN02738        217 ADGEIWRVRRRAIV-PALHQKYVAAMISLFGQASDRLCQKLDAAAS-----DGEDVEMESLFSRLTLDIIGKAVFNYDFD  290 (633)
T ss_pred             CCcHHHHHHHHhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCcEeHHHHHHHHHHHHHHHHHhCCCcc
Confidence            57999999999988 9999999999999999999999999987644     36789999999999999999999999885


Q ss_pred             hH-hHHHHHHHHHHHHHhccccccccccchhhhhh--hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--ccch
Q 047776          205 EK-KIREVEDVQRLMMLNTRRFNVLNFWPRVTKFV--LRKLWGEFFEILKKQESVLLPLIRDRRRMKEEGLSQA--KEDE  279 (521)
Q Consensus       205 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~  279 (521)
                      .. ..+.+..................+.+|+...+  .....++..+..+.+....+.+++.+++..++.....  ....
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~  370 (633)
T PLN02738        291 SLSNDTGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMN  370 (633)
T ss_pred             ccccchHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccc
Confidence            21 11122222222211111101111112211110  1112233444555566666666665444322210000  0001


Q ss_pred             hhhhhhHHHHHhcCCCccCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcCChHHHHHHHHHhhhcCCccccccc
Q 047776          280 NYVLAYVDTLFDLHLPEENRKLQENEIMSLCSEFLVAGTDTTSNALQWVMANLVKYPDIQEKVFKEIKGVVGDEEIRQVT  359 (521)
Q Consensus       280 ~~~~~~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~klr~Ei~~~~~~~~~~~~~  359 (521)
                      ....|+++.+++..     ..++++++.+++.++++||+|||+.+|+|++++|++||++|+|||+|+++++++   +.++
T Consensus       371 ~~~~dil~~Ll~~~-----~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~---~~~t  442 (633)
T PLN02738        371 ERDPSILHFLLASG-----DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD---RFPT  442 (633)
T ss_pred             cccchHHHHHHHcC-----CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC---CCCC
Confidence            12347899888643     358999999999999999999999999999999999999999999999999974   6789


Q ss_pred             hhhhccChhhHHHHHhhhcCCCCCcccCccccccceeeccEEecCCcEEEEcccccccCCCCCCCCCCCCCCCcccCCCC
Q 047776          360 EDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMVLNGFYFPKNAIINFMVAEMGCWDSEVWDDPTSFRPERFLNGEG  439 (521)
Q Consensus       360 ~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~  439 (521)
                      ++++++||||+|||+|+|||+|+++. .+|.+.+|.+++||.|||||.|.++.|.+| |||++||||++|+||||+....
T Consensus       443 ~edL~kLPYL~AVIkEtLRL~p~~p~-~~R~a~~d~~i~gy~IPkGT~V~~s~~~ih-rdp~ifpdP~~F~PERWl~~~~  520 (633)
T PLN02738        443 IEDMKKLKYTTRVINESLRLYPQPPV-LIRRSLENDMLGGYPIKRGEDIFISVWNLH-RSPKHWDDAEKFNPERWPLDGP  520 (633)
T ss_pred             HHHHccCHHHHHHHHHHHhcCCCccc-cceeeccCceECCEEECCCCEEEecHHHHh-CCccccCCccccCcccCCCCCC
Confidence            99999999999999999999999996 568899999999999999999999999999 9999999999999999985311


Q ss_pred             CCCccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHHccEEEecCCCCCcccccccceecccCCeeEEeecC
Q 047776          440 NGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYFVANLIWHYEWKAVDGDEVDFEEKQEFTKVMKTPLKAHIHPR  519 (521)
Q Consensus       440 ~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  519 (521)
                      +. .    .......++|||.|+|.|+|++||++|++++++.|+++|++++.++.+ ++....++++.++++++|++++|
T Consensus       521 ~~-~----~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~-~~~~~~~~~~~p~~~l~v~l~~R  594 (633)
T PLN02738        521 NP-N----ETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP-PVKMTTGATIHTTEGLKMTVTRR  594 (633)
T ss_pred             Cc-c----ccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC-CcccccceEEeeCCCcEEEEEEC
Confidence            00 0    011245799999999999999999999999999999999999887643 23333467888899999999999


Q ss_pred             CC
Q 047776          520 SK  521 (521)
Q Consensus       520 ~~  521 (521)
                      .+
T Consensus       595 ~~  596 (633)
T PLN02738        595 TK  596 (633)
T ss_pred             CC
Confidence            63


No 24 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=1.6e-71  Score=545.04  Aligned_cols=444  Identities=20%  Similarity=0.268  Sum_probs=346.0

Q ss_pred             CCCCCCCCCCCCCCcccchhhhhhc--CCCchHHHHHHHHhcCCeEEEEeCCccEEEecCHHHHHHHHHhCCccccCCCC
Q 047776           29 YFNYKLPPGPWNFPIIGNILLARKS--VLDLEPMIHDLHKKFGPATTLHIGFRPVIFICDRSLAHQALIQNGAVFSGRPP  106 (521)
Q Consensus        29 ~~~~~~~Pgp~~~p~lG~~~~~~~~--~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dpe~i~~v~~~~~~~f~~~~~  106 (521)
                      +++.+.||||+++|++||++.+...  ..+++.++.+|+++||+||++++|+.++++++||+++++++.+++..|..+..
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~   82 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP   82 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence            4567789999999999999887532  24688899999999999999999999999999999999999888877765432


Q ss_pred             CccceeeeccCCcceeccCCChhHHHHHHHHHhhhcChhhHhhh-HHHHHHHHHHHHHHHHHhhcccCCCCCcccchHHH
Q 047776          107 AGAVVKITSANQHNINSASYGPNWRLLRRNLISEIIHPSRLKSY-SHARKWVLQILIDGLNLQAVNNGDRDDRAVKLRDH  185 (521)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~-~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~  185 (521)
                      . .+..++|.  .++.+ .+|+.|+++|+.+. +.|+...+..+ .+.+.+.++.+++.+.         ++..+|+.+.
T Consensus        83 ~-~~~~l~g~--~~~~~-~~g~~wr~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~  148 (452)
T PLN03141         83 K-SLTELMGK--SSILL-INGSLQRRVHGLIG-AFLKSPHLKAQITRDMERYVSESLDSWR---------DDPPVLVQDE  148 (452)
T ss_pred             h-hHHHHhCc--ccccc-cCcHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHHHHhcc---------CCCCEEhHHH
Confidence            1 12234442  24444 47999999999987 77887777653 4555555555555442         2567899999


Q ss_pred             HHHHHHHHHHHhhhcCcCChHhHHHHHHHHHHHHHhccccccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 047776          186 IQFAMFCLLVLMCFGDKLDEKKIREVEDVQRLMMLNTRRFNVLNFWPRVTKFVLRKLWGEFFEILKKQESVLLPLIRDRR  265 (521)
Q Consensus       186 ~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  265 (521)
                      +..+++++++.++||.+++.+. ..+......+........  .++|.       ..+.+..+..+++.+++.++|++++
T Consensus       149 ~~~~~~~vi~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~p~-------~~~~~~~~~~~~l~~~~~~~i~~~~  218 (452)
T PLN03141        149 TKKIAFEVLVKALISLEPGEEM-EFLKKEFQEFIKGLMSLP--IKLPG-------TRLYRSLQAKKRMVKLVKKIIEEKR  218 (452)
T ss_pred             HHHHHHHHHHHHHcCCCchHHH-HHHHHHHHHHhhhHHhCc--cCCCc-------hHhHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998764332 333333333322211111  11221       1223445667888899999998887


Q ss_pred             HHHHhcccccccchhhhhhhHHHHHhcCCCccCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcCChHHHHHHHH
Q 047776          266 RMKEEGLSQAKEDENYVLAYVDTLFDLHLPEENRKLQENEIMSLCSEFLVAGTDTTSNALQWVMANLVKYPDIQEKVFKE  345 (521)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~klr~E  345 (521)
                      +..+.+.   +.......|+++.+++..    +..++++++..++.++++||+|||+.+++|++++|+.||++|+++++|
T Consensus       219 ~~~~~~~---~~~~~~~~d~l~~ll~~~----~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~E  291 (452)
T PLN03141        219 RAMKNKE---EDETGIPKDVVDVLLRDG----SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEE  291 (452)
T ss_pred             HHHhccC---ccccCChhhHHHHHHhcC----CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHH
Confidence            6543210   000011348999888743    345899999999999999999999999999999999999999999999


Q ss_pred             HhhhcCC--ccccccchhhhccChhhHHHHHhhhcCCCCCcccCccccccceeeccEEecCCcEEEEcccccccCCCCCC
Q 047776          346 IKGVVGD--EEIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMVLNGFYFPKNAIINFMVAEMGCWDSEVW  423 (521)
Q Consensus       346 i~~~~~~--~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~~d~~~~  423 (521)
                      ++++.+.  ..++.++.+++.+||||+|||+|+||++|+++ .++|.+.+|++++||.||||+.|+++.+++| |||++|
T Consensus       292 i~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~-~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~-~d~~~~  369 (452)
T PLN03141        292 NMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIIN-GVMRKAMKDVEIKGYLIPKGWCVLAYFRSVH-LDEENY  369 (452)
T ss_pred             HHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcC-CcceeecCCeeECCEEECCCCEEEEehHhcc-CCchhc
Confidence            9988642  11256899999999999999999999999998 5689999999999999999999999999999 999999


Q ss_pred             CCCCCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHHccEEEecCCCCCccccccc
Q 047776          424 DDPTSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYFVANLIWHYEWKAVDGDEVDFEEKQE  503 (521)
Q Consensus       424 ~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~  503 (521)
                      +||++|+||||++.+.           .+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++..+   .  .
T Consensus       370 ~dP~~F~PeRfl~~~~-----------~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~---~--~  433 (452)
T PLN03141        370 DNPYQFNPWRWQEKDM-----------NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTIV---N--F  433 (452)
T ss_pred             CCccccCcccccCCCC-----------CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCee---e--c
Confidence            9999999999997521           1357999999999999999999999999999999999998765432   1  2


Q ss_pred             ceecccCCeeEEeecCCC
Q 047776          504 FTKVMKTPLKAHIHPRSK  521 (521)
Q Consensus       504 ~~~~~~~~~~v~~~~r~~  521 (521)
                      .++.++.++.|++++|.|
T Consensus       434 ~~~~~~~~~~~~~~~~~~  451 (452)
T PLN03141        434 PTVRMKRKLPIWVTRIDD  451 (452)
T ss_pred             ccccCCCCceEEEEeCCC
Confidence            477899999999999964


No 25 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=3.6e-71  Score=543.25  Aligned_cols=436  Identities=20%  Similarity=0.334  Sum_probs=344.5

Q ss_pred             HhccCCCCCCCCCCCCCCCCcccchhhhhhcCCCchHHHHHHHHhcCCeEEEEeCCccEEEecCHHHHHHHHHhCCcccc
Q 047776           23 LLRPSKYFNYKLPPGPWNFPIIGNILLARKSVLDLEPMIHDLHKKFGPATTLHIGFRPVIFICDRSLAHQALIQNGAVFS  102 (521)
Q Consensus        23 ~~~~~~~~~~~~~Pgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dpe~i~~v~~~~~~~f~  102 (521)
                      .+++..+.+.+.||||+++|++||++.+.  ..+++.++.+++++||++|++++++.++|+++||+++++|+.++.+.|.
T Consensus        25 ~~~~~~~~~~~~Ppgp~~~P~iG~~~~~~--~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~  102 (463)
T PLN02196         25 GFRRSSSTKLPLPPGTMGWPYVGETFQLY--SQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK  102 (463)
T ss_pred             HhccCCCCCCCCCCCCCCCCccchHHHHH--hcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc
Confidence            33444455678899999999999988764  3478899999999999999999999999999999999999987766663


Q ss_pred             CCCCCccc-eeeeccCCcceeccCCChhHHHHHHHHHhhhcChhhHhhhHHHHHHHHHHHHHHHHHhhcccCCCCCcccc
Q 047776          103 GRPPAGAV-VKITSANQHNINSASYGPNWRLLRRNLISEIIHPSRLKSYSHARKWVLQILIDGLNLQAVNNGDRDDRAVK  181 (521)
Q Consensus       103 ~~~~~~~~-~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vd  181 (521)
                        +..... ...++  ..++++ .+|+.|+++||.+. +.|++++++.+.+.+.+.++++++.|.          +..+|
T Consensus       103 --~~~~~~~~~~~g--~~~l~~-~~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~~~~~~~----------~~~v~  166 (463)
T PLN02196        103 --PTFPASKERMLG--KQAIFF-HQGDYHAKLRKLVL-RAFMPDAIRNMVPDIESIAQESLNSWE----------GTQIN  166 (463)
T ss_pred             --ccCchHHHHHcC--cccccc-cCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHcCC----------CCeEE
Confidence              222211 11222  124444 47999999999998 889999999999999999998888762          44689


Q ss_pred             hHHHHHHHHHHHHHHhhhcCcCChHhHHHHHHHHHHHHHhccccccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 047776          182 LRDHIQFAMFCLLVLMCFGDKLDEKKIREVEDVQRLMMLNTRRFNVLNFWPRVTKFVLRKLWGEFFEILKKQESVLLPLI  261 (521)
Q Consensus       182 l~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  261 (521)
                      +.+.++.+++++++.++||.+.... ...+.+....+..      ....+|+.   ++....++..++.+.+.+++.+++
T Consensus       167 ~~~~~~~~~~~v~~~~~fG~~~~~~-~~~~~~~~~~~~~------~~~~~~~~---~p~~~~~~~~~a~~~~~~~~~~~i  236 (463)
T PLN02196        167 TYQEMKTYTFNVALLSIFGKDEVLY-REDLKRCYYILEK------GYNSMPIN---LPGTLFHKSMKARKELAQILAKIL  236 (463)
T ss_pred             eHHHHHHHHHHHHHHHHcCCCCchH-HHHHHHHHHHHhc------chhccccc---CCCccchHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999875321 1222222221111      11122321   111223445566777778888887


Q ss_pred             HHHHHHHHhcccccccchhhhhhhHHHHHhcCCCccCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcCChHHHH
Q 047776          262 RDRRRMKEEGLSQAKEDENYVLAYVDTLFDLHLPEENRKLQENEIMSLCSEFLVAGTDTTSNALQWVMANLVKYPDIQEK  341 (521)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~k  341 (521)
                      +++++..           ....|+++.+++.     +..++++++.++++++++||+|||+++++|++++|++||++|+|
T Consensus       237 ~~~~~~~-----------~~~~d~l~~ll~~-----~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~k  300 (463)
T PLN02196        237 SKRRQNG-----------SSHNDLLGSFMGD-----KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEA  300 (463)
T ss_pred             HHHhhcC-----------CCcccHHHHHHhc-----CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHH
Confidence            7665421           1123788888752     34589999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhcCCcc-ccccchhhhccChhhHHHHHhhhcCCCCCcccCccccccceeeccEEecCCcEEEEcccccccCCC
Q 047776          342 VFKEIKGVVGDEE-IRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMVLNGFYFPKNAIINFMVAEMGCWDS  420 (521)
Q Consensus       342 lr~Ei~~~~~~~~-~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~~d~  420 (521)
                      +++|++++.+... ++.++.++++++|||+|||+||||++|++++. .|.+.+|++++||.||||+.|+++.+++| |||
T Consensus       301 l~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~-~R~~~~d~~i~g~~IpkGt~v~~~~~~~~-rd~  378 (463)
T PLN02196        301 VTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFT-FREAVEDVEYEGYLIPKGWKVLPLFRNIH-HSA  378 (463)
T ss_pred             HHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCcccc-ceeeccccccCCEEeCCCCEEEeeHHHhc-CCc
Confidence            9999999886421 25689999999999999999999999999965 59999999999999999999999999999 999


Q ss_pred             CCCCCCCCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHHccEEEecCCCCCcccc
Q 047776          421 EVWDDPTSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYFVANLIWHYEWKAVDGDEVDFEE  500 (521)
Q Consensus       421 ~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~  500 (521)
                      ++|+||++|+||||++..            .+..++|||+|+|.|+|++||++|+++++++|+++|++++.++.. +++ 
T Consensus       379 ~~~~dP~~F~PeRfl~~~------------~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~-~~~-  444 (463)
T PLN02196        379 DIFSDPGKFDPSRFEVAP------------KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSN-GIQ-  444 (463)
T ss_pred             hhcCCcCccChhhhcCCC------------CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCC-ceE-
Confidence            999999999999999641            135799999999999999999999999999999999999876532 332 


Q ss_pred             cccceecccCCeeEEeecC
Q 047776          501 KQEFTKVMKTPLKAHIHPR  519 (521)
Q Consensus       501 ~~~~~~~~~~~~~v~~~~r  519 (521)
                       ...+..|+.+++|+++..
T Consensus       445 -~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        445 -YGPFALPQNGLPIALSRK  462 (463)
T ss_pred             -EcccccCCCCceEEEecC
Confidence             344567899999998753


No 26 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=1.2e-69  Score=530.21  Aligned_cols=441  Identities=20%  Similarity=0.283  Sum_probs=339.6

Q ss_pred             CCCCCCCCCCCCCCcccchhhhhhc--CCCchHHHHHHHHhcCCeEEEEeCCccEEEecCHHHHHHHHHhCCccccCCCC
Q 047776           29 YFNYKLPPGPWNFPIIGNILLARKS--VLDLEPMIHDLHKKFGPATTLHIGFRPVIFICDRSLAHQALIQNGAVFSGRPP  106 (521)
Q Consensus        29 ~~~~~~~Pgp~~~p~lG~~~~~~~~--~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dpe~i~~v~~~~~~~f~~~~~  106 (521)
                      ..+.+.||||.++|++||++++...  ..++..++.+++++||++|++++++.++++|+||+++++++.++...|.++..
T Consensus        26 ~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~  105 (472)
T PLN02987         26 YRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYP  105 (472)
T ss_pred             cCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCc
Confidence            4455689999999999999887431  24678889999999999999999999999999999999999888877866532


Q ss_pred             CccceeeeccCCcceeccCCChhHHHHHHHHHhhhcChhhHhhhHHHHHHHHHHHHHHHHHhhcccCCCCCcccchHHHH
Q 047776          107 AGAVVKITSANQHNINSASYGPNWRLLRRNLISEIIHPSRLKSYSHARKWVLQILIDGLNLQAVNNGDRDDRAVKLRDHI  186 (521)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~  186 (521)
                      . ....+++.  .++.++ +|+.|+++|+.+. +.++.+.++.+.   .+.+.++++...+..       ..++++.+.+
T Consensus       106 ~-~~~~~lg~--~~l~~~-~g~~wr~~R~~~~-~f~~~~~~~~~~---~~~~~~~~~~~~~~~-------~~~v~~~~~~  170 (472)
T PLN02987        106 G-SISNLLGK--HSLLLM-KGNLHKKMHSLTM-SFANSSIIKDHL---LLDIDRLIRFNLDSW-------SSRVLLMEEA  170 (472)
T ss_pred             H-HHHHHhCc--cccccc-CcHHHHHHHHHHH-HhcChHHHHHHH---HHHHHHHHHHHHHhh-------ccceehHHHH
Confidence            2 12344442  355555 7999999999975 544555555433   122333333222111       1368999999


Q ss_pred             HHHHHHHHHHhhhcCcCChHhHHHHHHHHHHHHHhccccccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 047776          187 QFAMFCLLVLMCFGDKLDEKKIREVEDVQRLMMLNTRRFNVLNFWPRVTKFVLRKLWGEFFEILKKQESVLLPLIRDRRR  266 (521)
Q Consensus       187 ~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  266 (521)
                      .++++++++.++||.+.++.. +.+...........    ....+|++     ...+++..+..+++.+++.++++++++
T Consensus       171 ~~~t~~vi~~~~fg~~~~~~~-~~~~~~~~~~~~~~----~~~~~p~l-----~~~~~~~~~~~~~~~~~~~~~i~~r~~  240 (472)
T PLN02987        171 KKITFELTVKQLMSFDPGEWT-ESLRKEYVLVIEGF----FSVPLPLF-----STTYRRAIQARTKVAEALTLVVMKRRK  240 (472)
T ss_pred             HHHHHHHHHHHHcCCCChHHH-HHHHHHHHHHHhhh----hcCCCcCC-----CchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999998764221 22222222111111    11223443     124566777888899999999998876


Q ss_pred             HHHhcccccccchhhhhhhHHHHHhcCCCccCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcCChHHHHHHHHH
Q 047776          267 MKEEGLSQAKEDENYVLAYVDTLFDLHLPEENRKLQENEIMSLCSEFLVAGTDTTSNALQWVMANLVKYPDIQEKVFKEI  346 (521)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~klr~Ei  346 (521)
                      ..+.+       .....|+++.+++..     ..++++++.+++.++++||+|||+++++|++++|++||++|+++++|+
T Consensus       241 ~~~~~-------~~~~~d~l~~ll~~~-----~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~  308 (472)
T PLN02987        241 EEEEG-------AEKKKDMLAALLASD-----DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEH  308 (472)
T ss_pred             hhhcc-------CcccccHHHHHHhcC-----CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHH
Confidence            54220       011248999999753     258999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCc-cccccchhhhccChhhHHHHHhhhcCCCCCcccCccccccceeeccEEecCCcEEEEcccccccCCCCCCCC
Q 047776          347 KGVVGDE-EIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMVLNGFYFPKNAIINFMVAEMGCWDSEVWDD  425 (521)
Q Consensus       347 ~~~~~~~-~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~~d~~~~~~  425 (521)
                      +++.+.. ....++++++.+|||++||++|+||++|+++ .++|.+.+|++++||.||||+.|.++.+.+| |||++|+|
T Consensus       309 ~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~-~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~-~d~~~~~~  386 (472)
T PLN02987        309 EKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIG-GIFRRAMTDIEVKGYTIPKGWKVFASFRAVH-LDHEYFKD  386 (472)
T ss_pred             HHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcC-CccccCCCCeeECCEEECCCCEEEEehHHhh-CCcccCCC
Confidence            9987532 1145789999999999999999999999998 5689999999999999999999999999999 99999999


Q ss_pred             CCCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHHccEEEecCCCCCcccccccce
Q 047776          426 PTSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYFVANLIWHYEWKAVDGDEVDFEEKQEFT  505 (521)
Q Consensus       426 p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~  505 (521)
                      |++|+||||++.+.   .     ...+..++|||+|+|.|+|++||++|++++++.|+++|++++.++..+.    ...+
T Consensus       387 p~~F~PeRfl~~~~---~-----~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~----~~~~  454 (472)
T PLN02987        387 ARTFNPWRWQSNSG---T-----TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDKLV----FFPT  454 (472)
T ss_pred             ccccCcccCCCCCC---C-----CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCcee----eccc
Confidence            99999999997521   0     1123579999999999999999999999999999999999988765422    2348


Q ss_pred             ecccCCeeEEeecCC
Q 047776          506 KVMKTPLKAHIHPRS  520 (521)
Q Consensus       506 ~~~~~~~~v~~~~r~  520 (521)
                      .+|.+++.+++++|.
T Consensus       455 ~~p~~~~~~~~~~r~  469 (472)
T PLN02987        455 TRTQKRYPINVKRRD  469 (472)
T ss_pred             ccCCCCceEEEEecc
Confidence            889999999999983


No 27 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=5.7e-70  Score=537.93  Aligned_cols=461  Identities=19%  Similarity=0.226  Sum_probs=357.3

Q ss_pred             CCCCCCCCCCcccchhhhhh--cCCCchHHHHHHHHhcCCeEEEEeCCccEEEecCHHHHHHHHHhCCccccCCCCCccc
Q 047776           33 KLPPGPWNFPIIGNILLARK--SVLDLEPMIHDLHKKFGPATTLHIGFRPVIFICDRSLAHQALIQNGAVFSGRPPAGAV  110 (521)
Q Consensus        33 ~~~Pgp~~~p~lG~~~~~~~--~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dpe~i~~v~~~~~~~f~~~~~~~~~  110 (521)
                      +.--|-.|||++|..+.+..  .++.++..+.+|+++|||+|++++|+.+.++++|||++++|+.+.+..|.+++.....
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~   91 (489)
T PLN02936         12 RLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVS   91 (489)
T ss_pred             ccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhh
Confidence            34568889999999888764  3467889999999999999999999999999999999999997767788776532211


Q ss_pred             eeeeccCCcceeccCCChhHHHHHHHHHhhhcChhhHhhhHH-HHHHHHHHHHHHHHHhhcccCCCCCcccchHHHHHHH
Q 047776          111 VKITSANQHNINSASYGPNWRLLRRNLISEIIHPSRLKSYSH-ARKWVLQILIDGLNLQAVNNGDRDDRAVKLRDHIQFA  189 (521)
Q Consensus       111 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~  189 (521)
                      ...++   .++++ .+|+.|+.+||.+. +.|+...+..+.+ .+.+.++.+++.+.+...     ++.++|+.+.++.+
T Consensus        92 ~~~~~---~~i~~-~~g~~wk~~Rk~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~-----~g~~vd~~~~~~~~  161 (489)
T PLN02936         92 EFLFG---SGFAI-AEGELWTARRRAVV-PSLHRRYLSVMVDRVFCKCAERLVEKLEPVAL-----SGEAVNMEAKFSQL  161 (489)
T ss_pred             HHHhc---Ccccc-CCchHHHHHHHhhc-CccCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCceeHHHHHHHH
Confidence            11222   34444 47999999999988 8899888888755 778889999999987643     36689999999999


Q ss_pred             HHHHHHHhhhcCcCChHh-HHHHHHHHHHHHHhccccccccccchhhhhh---hhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 047776          190 MFCLLVLMCFGDKLDEKK-IREVEDVQRLMMLNTRRFNVLNFWPRVTKFV---LRKLWGEFFEILKKQESVLLPLIRDRR  265 (521)
Q Consensus       190 ~~~~~~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~  265 (521)
                      ++|+++.++||.+++... ...+............ ......+|++...+   ..+..++..+..+.+.+++.+++++++
T Consensus       162 ~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~  240 (489)
T PLN02936        162 TLDVIGLSVFNYNFDSLTTDSPVIQAVYTALKEAE-TRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCK  240 (489)
T ss_pred             HHHHHHHHHcCCCccccccCcHHHHHHHHHHHHHH-HhhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999985311 1122222222222111 11222344332110   112344566777888888888888777


Q ss_pred             HHHHhcccccc-c--chhhhhhhHHHHHhcCCCccCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcCChHHHHH
Q 047776          266 RMKEEGLSQAK-E--DENYVLAYVDTLFDLHLPEENRKLQENEIMSLCSEFLVAGTDTTSNALQWVMANLVKYPDIQEKV  342 (521)
Q Consensus       266 ~~~~~~~~~~~-~--~~~~~~~~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~kl  342 (521)
                      +..++...... .  ..+...|+++.+++..     ..++++++.++++++++||+|||+++++|++++|++||++|+|+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~-----~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl  315 (489)
T PLN02936        241 EIVEAEGEVIEGEEYVNDSDPSVLRFLLASR-----EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKA  315 (489)
T ss_pred             HHHhhcccccccccccccCchHHHHHHHhcc-----ccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence            65432111100 0  0112358899988643     24899999999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCccccccchhhhccChhhHHHHHhhhcCCCCCcccCccccccceeeccEEecCCcEEEEcccccccCCCCC
Q 047776          343 FKEIKGVVGDEEIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMVLNGFYFPKNAIINFMVAEMGCWDSEV  422 (521)
Q Consensus       343 r~Ei~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~~d~~~  422 (521)
                      |+|++++++.   ..++++++++||||+|||+||||++||++...+|.+.+|+.++||.||||+.|+++.+++| |||++
T Consensus       316 ~~Ei~~~~~~---~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~-rd~~~  391 (489)
T PLN02936        316 QEELDRVLQG---RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIH-RSPEV  391 (489)
T ss_pred             HHHHHHHhcC---CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhcc-CChhh
Confidence            9999999875   4578999999999999999999999999988777778888889999999999999999999 99999


Q ss_pred             CCCCCCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHHccEEEecCCCCCcccccc
Q 047776          423 WDDPTSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYFVANLIWHYEWKAVDGDEVDFEEKQ  502 (521)
Q Consensus       423 ~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~  502 (521)
                      ||||++|+||||+.++...     .....+..++|||+|+|.|+|++||++|+++++++|+++|++++.++.++.  ...
T Consensus       392 ~~dP~~F~PeRwl~~~~~~-----~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~--~~~  464 (489)
T PLN02936        392 WERAEEFVPERFDLDGPVP-----NETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIV--MTT  464 (489)
T ss_pred             CCCccccCccccCCCCCCc-----cccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccc--eec
Confidence            9999999999999652100     011123579999999999999999999999999999999999998765542  234


Q ss_pred             cceecccCCeeEEeecCC
Q 047776          503 EFTKVMKTPLKAHIHPRS  520 (521)
Q Consensus       503 ~~~~~~~~~~~v~~~~r~  520 (521)
                      +++..++++++|++++|.
T Consensus       465 ~~~~~~~~~~~v~~~~R~  482 (489)
T PLN02936        465 GATIHTTNGLYMTVSRRR  482 (489)
T ss_pred             ceEEeeCCCeEEEEEeee
Confidence            567778999999999984


No 28 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=2.9e-69  Score=537.41  Aligned_cols=443  Identities=20%  Similarity=0.324  Sum_probs=344.9

Q ss_pred             CCCCCCCCCCCCCcccchhhhhh--cCCCchHHHHHHHHhcCC--eEEEEeCCccEEEecCHHHHHHHHHhCCccccCCC
Q 047776           30 FNYKLPPGPWNFPIIGNILLARK--SVLDLEPMIHDLHKKFGP--ATTLHIGFRPVIFICDRSLAHQALIQNGAVFSGRP  105 (521)
Q Consensus        30 ~~~~~~Pgp~~~p~lG~~~~~~~--~~~~~~~~~~~~~~kyG~--v~~~~~~~~~~vvv~dpe~i~~v~~~~~~~f~~~~  105 (521)
                      .+.+.||||+++|++|+++.+..  ...+++.++.+++++||+  +|++++++.+.++++||+++++|+.++ +.|..+.
T Consensus        39 ~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~  117 (490)
T PLN02302         39 GQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGW  117 (490)
T ss_pred             CCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccCC
Confidence            35568999999999999988753  234688899999999997  789999999999999999999999644 5565443


Q ss_pred             CCccceeeeccCCcceeccCCChhHHHHHHHHHhhhc-ChhhHhhhHHHHHHHHHHHHHHHHHhhcccCCCCCcccchHH
Q 047776          106 PAGAVVKITSANQHNINSASYGPNWRLLRRNLISEII-HPSRLKSYSHARKWVLQILIDGLNLQAVNNGDRDDRAVKLRD  184 (521)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~  184 (521)
                      ... ....++.  ..+ +..+|+.|+.+|+.+. +.| ++++++.+.+.+.+.++.+++.+..         +..+|+.+
T Consensus       118 ~~~-~~~~~g~--~~~-~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~i~~~v~~~~~~~~~---------~~~v~~~~  183 (490)
T PLN02302        118 PES-TVELIGR--KSF-VGITGEEHKRLRRLTA-APVNGPEALSTYIPYIEENVKSCLEKWSK---------MGEIEFLT  183 (490)
T ss_pred             chh-HHHHhcc--ccc-cccCcHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHhcC---------CCCEehHH
Confidence            222 1123332  233 3347999999999988 667 5788999999999999999988742         34689999


Q ss_pred             HHHHHHHHHHHHhhhcCcCChHhHHHHHHHHHHHHHhccccccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 047776          185 HIQFAMFCLLVLMCFGDKLDEKKIREVEDVQRLMMLNTRRFNVLNFWPRVTKFVLRKLWGEFFEILKKQESVLLPLIRDR  264 (521)
Q Consensus       185 ~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  264 (521)
                      .+..+++++++.++||.+++... +.+.............  ....+|..       .+.+..+..+.+.+++.+.++++
T Consensus       184 ~~~~~~~~vi~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~~~~~~~~l~~~~~~~i~~~  253 (490)
T PLN02302        184 ELRKLTFKIIMYIFLSSESELVM-EALEREYTTLNYGVRA--MAINLPGF-------AYHRALKARKKLVALFQSIVDER  253 (490)
T ss_pred             HHHHHHHHHHHHHHcCCCChHHH-HHHHHHHHHHHHHhhh--CCcCCCch-------hhHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999874322 2222222211111111  11112221       22344456677888888888887


Q ss_pred             HHHHHhcccccccchhhhhhhHHHHHhcCCCccCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcCChHHHHHHH
Q 047776          265 RRMKEEGLSQAKEDENYVLAYVDTLFDLHLPEENRKLQENEIMSLCSEFLVAGTDTTSNALQWVMANLVKYPDIQEKVFK  344 (521)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~klr~  344 (521)
                      ++..+.+    .  .....|+++.+++...+ ++..++++++.+++.++++||+|||+++++|++++|++||++|+||++
T Consensus       254 ~~~~~~~----~--~~~~~d~l~~ll~~~~~-~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~  326 (490)
T PLN02302        254 RNSRKQN----I--SPRKKDMLDLLLDAEDE-NGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKA  326 (490)
T ss_pred             HHhhhcc----C--CCCcCCHHHHHHhhhcc-CCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            6553221    0  01234899999976532 345689999999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCcc--ccccchhhhccChhhHHHHHhhhcCCCCCcccCccccccceeeccEEecCCcEEEEcccccccCCCCC
Q 047776          345 EIKGVVGDEE--IRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMVLNGFYFPKNAIINFMVAEMGCWDSEV  422 (521)
Q Consensus       345 Ei~~~~~~~~--~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~~d~~~  422 (521)
                      |+++++++..  ...++++++++||||+|||+|+||++|+++. .+|.+.+|++++||.||||+.|.++.+++| |||++
T Consensus       327 E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~-rd~~~  404 (490)
T PLN02302        327 EQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLT-VFREAKTDVEVNGYTIPKGWKVLAWFRQVH-MDPEV  404 (490)
T ss_pred             HHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCccc-chhcccCCEeECCEEECCCCEEEeeHHHhc-CCccc
Confidence            9999986421  1237899999999999999999999999985 579999999999999999999999999999 99999


Q ss_pred             CCCCCCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHHccEEEecCCCCCcccccc
Q 047776          423 WDDPTSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYFVANLIWHYEWKAVDGDEVDFEEKQ  502 (521)
Q Consensus       423 ~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~  502 (521)
                      |+||++|+||||++..           ..+..++|||+|+|.|+|++||.+|++++++.|+++|++++.++.. ++.  .
T Consensus       405 ~~dP~~F~PeR~~~~~-----------~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~--~  470 (490)
T PLN02302        405 YPNPKEFDPSRWDNYT-----------PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPGC-KVM--Y  470 (490)
T ss_pred             CCCccccChhhcCCCC-----------CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCC-cce--e
Confidence            9999999999999651           1235799999999999999999999999999999999999886532 222  2


Q ss_pred             cceecccCCeeEEeecCC
Q 047776          503 EFTKVMKTPLKAHIHPRS  520 (521)
Q Consensus       503 ~~~~~~~~~~~v~~~~r~  520 (521)
                      ..+..|..++.+++++|.
T Consensus       471 ~~~~~p~~~~~~~~~~~~  488 (490)
T PLN02302        471 LPHPRPKDNCLARITKVA  488 (490)
T ss_pred             CCCCCCCCCceEEEEecc
Confidence            234788899999999885


No 29 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=6.8e-70  Score=486.75  Aligned_cols=449  Identities=22%  Similarity=0.314  Sum_probs=356.7

Q ss_pred             CCCCCCCC-CCcccchhhhhhcCCCchHHHHHHHHhcCCeEEEEeCCccEEEecCHHHHHHHHHhCCccccCCCCC-ccc
Q 047776           33 KLPPGPWN-FPIIGNILLARKSVLDLEPMIHDLHKKFGPATTLHIGFRPVIFICDRSLAHQALIQNGAVFSGRPPA-GAV  110 (521)
Q Consensus        33 ~~~Pgp~~-~p~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dpe~i~~v~~~~~~~f~~~~~~-~~~  110 (521)
                      ..||.-++ +||+|+...|   ++++.+++++.++|||+||++.++|+.+.++.+|+....+++.....++..... ...
T Consensus        31 ~~PPli~gwiP~lG~a~~f---gk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~  107 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAF---GKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLT  107 (486)
T ss_pred             CCCcccccCcchhhHHHHh---ccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhh
Confidence            57888776 5999999999   569999999999999999999999999999999999999995543444443332 112


Q ss_pred             eeeeccCCcceeccCCChhHHHHHHHHHhhhcChhhHhhhHHHHHHHHHHHHHH-HHHhhcccCCCCCcccchHHHHHHH
Q 047776          111 VKITSANQHNINSASYGPNWRLLRRNLISEIIHPSRLKSYSHARKWVLQILIDG-LNLQAVNNGDRDDRAVKLRDHIQFA  189 (521)
Q Consensus       111 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~-l~~~~~~~~~~~~~~vdl~~~~~~~  189 (521)
                      ...+|.   ++.....+.....+.+.+. ..+...+++++.+.+.+++++.++. +.+        +|.+..+..+++.+
T Consensus       108 ~~vFg~---~v~~d~~~~~~~e~~~~~k-~~L~~~~lk~~~e~m~~el~~~f~~~~~~--------s~~~d~l~~~~~~i  175 (486)
T KOG0684|consen  108 TPVFGK---GVVYDVPNHVMMEQKKFFK-SALGGVALKSLVELMLEELHAYFETSLGE--------SGETDGLYTFCRLI  175 (486)
T ss_pred             hhhcCC---CccccCCCchHHHHHHHHH-HHhchhhHHHHHHHHHHHHHHHHhccccc--------ccchhHhhhhhHHH
Confidence            344443   4555566777788888777 7899999999999999998888877 333        37777889999999


Q ss_pred             HHHHHHHhhhcCcCChHhHHHHHHHHHHHHHhccccccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047776          190 MFCLLVLMCFGDKLDEKKIREVEDVQRLMMLNTRRFNVLNFWPRVTKFVLRKLWGEFFEILKKQESVLLPLIRDRRRMKE  269 (521)
Q Consensus       190 ~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  269 (521)
                      ++.+.-..+||...+. ..........++...+..  .-..||.   .++....++..++.+++.+.+...+.++++..+
T Consensus       176 i~tAs~~ll~~e~r~~-~d~~~a~l~~dLd~~F~~--~d~~FP~---~LP~~~~r~~~ra~~~i~k~f~~~i~~rr~s~s  249 (486)
T KOG0684|consen  176 IFTASRLLLGGEVRDQ-LDADVAKLYHDLDQGFQP--FDFLFPY---NLPIPLLRRRDRARKKISKIFSKIILDRRASIS  249 (486)
T ss_pred             hhhhHHHhhhhhhhhh-hcchHHHHHHHHhccccc--hHhhccc---CCCcchhhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence            9998888888876532 112223333333333322  2223553   234455666678888999999888888887652


Q ss_pred             hcccccccchhhhhhhHHHHHhcCCCccCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcCChHHHHHHHHHhhh
Q 047776          270 EGLSQAKEDENYVLAYVDTLFDLHLPEENRKLQENEIMSLCSEFLVAGTDTTSNALQWVMANLVKYPDIQEKVFKEIKGV  349 (521)
Q Consensus       270 ~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~klr~Ei~~~  349 (521)
                                ....|+++.+++ .. +++...+++|+...++.++|||+.||+++.+|++++|++|||+++.+++|+.++
T Consensus       250 ----------~~~~dmlq~l~~-~y-~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~v  317 (486)
T KOG0684|consen  250 ----------KWDNDMLQSLME-KY-KDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRV  317 (486)
T ss_pred             ----------cccHHHHHHHHH-Hh-hcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHH
Confidence                      122377888777 22 256789999999999999999999999999999999999999999999999999


Q ss_pred             cCCccccccchhhhccChhhHHHHHhhhcCCCCCcccCccccccceeecc----EEecCCcEEEEcccccccCCCCCCCC
Q 047776          350 VGDEEIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMVLNG----FYFPKNAIINFMVAEMGCWDSEVWDD  425 (521)
Q Consensus       350 ~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g----~~ip~g~~v~~~~~~~~~~d~~~~~~  425 (521)
                      +|.+. ..++.++++.||+|++||+|||||+||.+. +.|.+.+|.++.+    |.||+|..|.++++.+| |||++|||
T Consensus       318 lG~~~-~~l~~d~L~~lplL~~~IkEtLRL~~p~~~-~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~h-r~peif~d  394 (486)
T KOG0684|consen  318 LGEKK-EKLTYDQLKDLPLLDSCIKETLRLHPPAHS-LMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLH-RDPEIFPD  394 (486)
T ss_pred             hhccC-CCCCHHHHhcchHHHHHHHHHHhcCCchhh-HHHhhccceeeccCCcceecCCCCEEEecccccc-CCccccCC
Confidence            98774 459999999999999999999999999884 5799999999966    99999999999999999 99999999


Q ss_pred             CCCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHHccEEEecCCCCCcccccccce
Q 047776          426 PTSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYFVANLIWHYEWKAVDGDEVDFEEKQEFT  505 (521)
Q Consensus       426 p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~  505 (521)
                      |+.|+|+||+++++++.+   ....-.+.+||||+|+|.|||+.||.+|+|+++..+|++||+++++|..++.+ ...++
T Consensus       395 p~~Fk~dRf~~~~~~~~k---~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d-~s~~v  470 (486)
T KOG0684|consen  395 PEDFKPDRFLKDNGESKK---NGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVD-YSRMV  470 (486)
T ss_pred             hhhCChhhccCCCccccc---ccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCC-HHHhh
Confidence            999999999988653311   01111344699999999999999999999999999999999999998544433 33457


Q ss_pred             ecccCCeeEEeecCCC
Q 047776          506 KVMKTPLKAHIHPRSK  521 (521)
Q Consensus       506 ~~~~~~~~v~~~~r~~  521 (521)
                      ..|..+++|+++.|+.
T Consensus       471 ~~P~g~v~irYK~R~~  486 (486)
T KOG0684|consen  471 MQPEGDVRIRYKRRPL  486 (486)
T ss_pred             cCCCCCceEEEeecCC
Confidence            8899999999999963


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=4.4e-67  Score=516.08  Aligned_cols=439  Identities=18%  Similarity=0.262  Sum_probs=333.9

Q ss_pred             CCcccchhhhhhcCCCchHHHHHHHHhcC-CeEEEEeCCccEEEecCHHHHHHHHHhCCccccCCCCCcc-ceeeeccCC
Q 047776           41 FPIIGNILLARKSVLDLEPMIHDLHKKFG-PATTLHIGFRPVIFICDRSLAHQALIQNGAVFSGRPPAGA-VVKITSANQ  118 (521)
Q Consensus        41 ~p~lG~~~~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~vvv~dpe~i~~v~~~~~~~f~~~~~~~~-~~~~~~~~~  118 (521)
                      .++.|++.....   +.+.++..+.++++ .+++++..+.  ++++||+.+++|+.++...|++...... +...++   
T Consensus        49 ~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g---  120 (502)
T PLN02426         49 AYLTASWAKDFD---NLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLG---  120 (502)
T ss_pred             CCccHHHHHhcc---cHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcC---
Confidence            457788876532   45677777888887 5777776554  8999999999999877777876543321 223333   


Q ss_pred             cceeccCCChhHHHHHHHHHhhhcChhhHhhhH--HHHHHHHHHHHHHHHHhhcccCCCCCcccchHHHHHHHHHHHHHH
Q 047776          119 HNINSASYGPNWRLLRRNLISEIIHPSRLKSYS--HARKWVLQILIDGLNLQAVNNGDRDDRAVKLRDHIQFAMFCLLVL  196 (521)
Q Consensus       119 ~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~  196 (521)
                      .++++ .+|+.|+.+||.+. +.|+..+++.+.  +.+.+..+.+++.+.+..+.   +++.++|+.++++++++|+++.
T Consensus       121 ~gi~~-~~g~~wk~~Rk~l~-~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~---~~~~~vd~~~~~~~~t~dvi~~  195 (502)
T PLN02426        121 RGIFN-VDGDSWRFQRKMAS-LELGSVSIRSYAFEIVASEIESRLLPLLSSAADD---GEGAVLDLQDVFRRFSFDNICK  195 (502)
T ss_pred             Cceee-cCcHHHHHHHHHhH-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCCceEcHHHHHHHHHHHHHHH
Confidence            35544 47999999999987 899999998874  67777788888888765431   1246799999999999999999


Q ss_pred             hhhcCcCChH----hHHHHHHHHHHHHHhccccccccccchhh---hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047776          197 MCFGDKLDEK----KIREVEDVQRLMMLNTRRFNVLNFWPRVT---KFVLRKLWGEFFEILKKQESVLLPLIRDRRRMKE  269 (521)
Q Consensus       197 ~~fG~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~l~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  269 (521)
                      ++||.+++..    ....+.+........... .....+|++.   +++..+..++..+..+.+.+++.++|+++++...
T Consensus       196 ~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~  274 (502)
T PLN02426        196 FSFGLDPGCLELSLPISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGF  274 (502)
T ss_pred             HHhCCCCcccCCCCCccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            9999987421    112233333322211110 1111223221   2122233456667778888888888888765320


Q ss_pred             hcccccccchhhhhhhHHHHHhcCCCccCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcCChHHHHHHHHHhhh
Q 047776          270 EGLSQAKEDENYVLAYVDTLFDLHLPEENRKLQENEIMSLCSEFLVAGTDTTSNALQWVMANLVKYPDIQEKVFKEIKGV  349 (521)
Q Consensus       270 ~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~klr~Ei~~~  349 (521)
                                +...|+++.+++..       .+++++.+++.++++||+|||+++++|++++|++||++|+|||+|++++
T Consensus       275 ----------~~~~dll~~ll~~~-------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~  337 (502)
T PLN02426        275 ----------SASKDLLSRFMASI-------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRV  337 (502)
T ss_pred             ----------CCcchHHHHHHhcC-------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence                      11238999998754       2688999999999999999999999999999999999999999999999


Q ss_pred             cCCccccccchhhhccChhhHHHHHhhhcCCCCCcccCccccccceee-ccEEecCCcEEEEcccccccCCCCCC-CCCC
Q 047776          350 VGDEEIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMVL-NGFYFPKNAIINFMVAEMGCWDSEVW-DDPT  427 (521)
Q Consensus       350 ~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i-~g~~ip~g~~v~~~~~~~~~~d~~~~-~~p~  427 (521)
                      .+++. ..++++++++||||+|||+|+||++||+|.. .|.+.+|.++ +|+.|||||.|.++.|++| |||++| |||+
T Consensus       338 ~~~~~-~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~-~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~-rd~~~~G~dp~  414 (502)
T PLN02426        338 MGPNQ-EAASFEEMKEMHYLHAALYESMRLFPPVQFD-SKFAAEDDVLPDGTFVAKGTRVTYHPYAMG-RMERIWGPDCL  414 (502)
T ss_pred             hCCCC-CCCCHHHHhcChHHHHHHHHHHhCCCCCCCc-ceeeccCCCcCCCcEECCCCEEEEchHHhc-CCccccCcChh
Confidence            87532 4689999999999999999999999999965 6999888887 9999999999999999999 999999 9999


Q ss_pred             CCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHHHccEEEecCCCCCcccccccceec
Q 047776          428 SFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYFVANLIWHYEWKAVDGDEVDFEEKQEFTKV  507 (521)
Q Consensus       428 ~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  507 (521)
                      +|+||||+++..       ....++..++|||+|+|.|+|++||++|++++++.|+++|+++..++.........+.+..
T Consensus       415 ~F~PeRwl~~~~-------~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  487 (502)
T PLN02426        415 EFKPERWLKNGV-------FVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTAT  487 (502)
T ss_pred             hcCccccCCCCC-------cCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEe
Confidence            999999997411       0112246789999999999999999999999999999999999865432222334467889


Q ss_pred             ccCCeeEEeecCC
Q 047776          508 MKTPLKAHIHPRS  520 (521)
Q Consensus       508 ~~~~~~v~~~~r~  520 (521)
                      ++++++|++++|.
T Consensus       488 ~~~gl~v~~~~r~  500 (502)
T PLN02426        488 VRGGLPVRVRERV  500 (502)
T ss_pred             cCCCEEEEEEEcc
Confidence            9999999999985


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=2.1e-60  Score=461.02  Aligned_cols=425  Identities=18%  Similarity=0.236  Sum_probs=300.0

Q ss_pred             CCCCCCCCCCCCCCcccchhhhhh--cCCCchHHHHHHHHhcCC-eEEEEeCCccE-------EEecCHHHHHHHHHh--
Q 047776           29 YFNYKLPPGPWNFPIIGNILLARK--SVLDLEPMIHDLHKKFGP-ATTLHIGFRPV-------IFICDRSLAHQALIQ--   96 (521)
Q Consensus        29 ~~~~~~~Pgp~~~p~lG~~~~~~~--~~~~~~~~~~~~~~kyG~-v~~~~~~~~~~-------vvv~dpe~i~~v~~~--   96 (521)
                      ..|.+.|||+.++|++|+.+++.+  ...++..++++.++|||+ ||+++++|.++       |+++||+.++.||..  
T Consensus        13 ~~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~   92 (480)
T PLN02648         13 SLPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSK   92 (480)
T ss_pred             CCCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchh
Confidence            346778999999999999987765  355778999999999999 99999988655       999999999999953  


Q ss_pred             --CCccccCCCCCccceeeeccCCcceeccCCChhHHHHHHHHHhhhcChhhHhhhHHHHHHHHHHHHHHHHHhhcccCC
Q 047776           97 --NGAVFSGRPPAGAVVKITSANQHNINSASYGPNWRLLRRNLISEIIHPSRLKSYSHARKWVLQILIDGLNLQAVNNGD  174 (521)
Q Consensus        97 --~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~  174 (521)
                        +...|.... .... .++|.+....++..+|+.|+++|+++. +.|+ ..++.+.+.+.+.++.+++.|.....    
T Consensus        93 ~~~~~~~~~~~-~~~~-~l~G~~~~~s~~~~~g~~H~r~Rrll~-~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~----  164 (480)
T PLN02648         93 VDKRDVFTGTY-MPST-AFTGGYRVLSYLDPSEPKHAKLKSFLF-ELLK-SRHRRFIPEFRAAFAELFDTWEAELA----  164 (480)
T ss_pred             ccccccceeee-ccCc-cccCCceeeeecCCCCchHHHHHHHHH-HHHH-HhhhhhhhHHHHHHHHHHHHHHHHHh----
Confidence              333344321 1212 355542111344568999999999988 8898 47788999999999999999965422    


Q ss_pred             CCCcccchHHHHHHHHHHHHHHhhhcCcCChHhH-HHHHHHHHHHHHhccccccccccchhhhhhhhhhhHHHHHHHHHH
Q 047776          175 RDDRAVKLRDHIQFAMFCLLVLMCFGDKLDEKKI-REVEDVQRLMMLNTRRFNVLNFWPRVTKFVLRKLWGEFFEILKKQ  253 (521)
Q Consensus       175 ~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~  253 (521)
                       .+.++|+.+.++++++|+++.++||.+.+.+.. +.+......+...       ..+|.... .              +
T Consensus       165 -~~~~vdv~~~~~~lt~~vi~~~lfG~~~~~~~l~~~~~~~~~~~~~~-------~~~p~~~~-~--------------l  221 (480)
T PLN02648        165 -KKGKAEFNDPLDQMAFNFLCKALTGKDPSETALGSDGPALIQKWLAL-------QLAPLAST-G--------------L  221 (480)
T ss_pred             -hCCCccccchHHHHHHHHHHHHHcCCCcchhhhccchhHHHHHHHHH-------HhhHHHHc-C--------------c
Confidence             255799999999999999999999987654211 1111222211110       00111000 0              0


Q ss_pred             HHHHHHHHHHHHHH----HHhcccccccchhhhhhhHHHHHhcCCCccCCCCCHHHHHHHHHH-HhhhcccchHHHHHHH
Q 047776          254 ESVLLPLIRDRRRM----KEEGLSQAKEDENYVLAYVDTLFDLHLPEENRKLQENEIMSLCSE-FLVAGTDTTSNALQWV  328 (521)
Q Consensus       254 ~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~ls~~~i~~~~~~-~~~ag~~tt~~~l~~~  328 (521)
                      ...+++++.++...    ...   ...+..+...+.++.+++...  + ..++++|+.++++. +.+++++|++++++|+
T Consensus       222 ~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ll~~~~--~-~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~  295 (480)
T PLN02648        222 PHVLEELLLHTFPLPFFLVKS---DYDKLYDFFRASATEALDLAE--K-FGISREEALHNLLFVLGFNAFGGFKIFFPAL  295 (480)
T ss_pred             hHHHHHHhhcccCCchhhhhc---cHHHHHHHHHHHHHHHHHHHH--h-cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence            00111111100000    000   000000101122234443331  1 34999999998875 4467788888999999


Q ss_pred             HHHHhcCCh-HHHHHHHHHhhhcCCccccccchhhhccChhhHHHHHhhhcCCCCCcccCccccccceeec----cEEec
Q 047776          329 MANLVKYPD-IQEKVFKEIKGVVGDEEIRQVTEDDLQKLPYLKAVILETLRRHPPARFIEPRALKQDMVLN----GFYFP  403 (521)
Q Consensus       329 l~~L~~~p~-~q~klr~Ei~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~----g~~ip  403 (521)
                      +++|++||+ +|++|++|++++++... ..++++++++||||++||+|+||++|+++.. .|.+.+|++++    ||.||
T Consensus       296 l~~L~~~p~~v~~klr~Ei~~~~~~~~-~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~-~r~a~~d~~l~~~~~g~~Ip  373 (480)
T PLN02648        296 LKWVGRAGEELQARLAEEVRSAVKAGG-GGVTFAALEKMPLVKSVVYEALRIEPPVPFQ-YGRAREDFVIESHDAAFEIK  373 (480)
T ss_pred             HHHHHcCCHHHHHHHHHHHHHHhccCC-CCCCHHHHhcCHHHHHHHHHHHhhcCCcccc-cceecCCEEEecCCceEEEC
Confidence            999999995 99999999999986421 5689999999999999999999999999964 57889999995    79999


Q ss_pred             CCcEEEEcccccccCCCCCCCCCCCCCCCcccCCCCCCCccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHHHH
Q 047776          404 KNAIINFMVAEMGCWDSEVWDDPTSFRPERFLNGEGNGGEVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYFVANLI  483 (521)
Q Consensus       404 ~g~~v~~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll  483 (521)
                      ||+.|+++.+.+| |||++|+||++|||+||+++++..... ...-.......+||+|+|.|+|++||++|++++++.|+
T Consensus       374 kG~~V~~~~~~~h-rdp~~~~dP~~F~PeRf~~~~~~~~~~-~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll  451 (480)
T PLN02648        374 KGEMLFGYQPLVT-RDPKVFDRPEEFVPDRFMGEEGEKLLK-YVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELF  451 (480)
T ss_pred             CCCEEEEChHHHh-CCcccCCCcceeCCCCCCCCCcccccc-ccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHH
Confidence            9999999999999 999999999999999998652210000 00000001123347788999999999999999999999


Q ss_pred             HccE-EEecCCC
Q 047776          484 WHYE-WKAVDGD  494 (521)
Q Consensus       484 ~~f~-~~~~~~~  494 (521)
                      ++|+ +++.++.
T Consensus       452 ~~f~~~~l~~~~  463 (480)
T PLN02648        452 LRYDSFEIEVDT  463 (480)
T ss_pred             HHhCEEeecCCc
Confidence            9998 9987654


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=6.3e-54  Score=411.39  Aligned_cols=381  Identities=24%  Similarity=0.339  Sum_probs=297.9

Q ss_pred             chHHHHHHHHhcCCeEEEEeCCcc--EEEecCHHHHHHHHHhCCccccCCCCCcc----ceeeeccCCcceeccCCChhH
Q 047776           57 LEPMIHDLHKKFGPATTLHIGFRP--VIFICDRSLAHQALIQNGAVFSGRPPAGA----VVKITSANQHNINSASYGPNW  130 (521)
Q Consensus        57 ~~~~~~~~~~kyG~v~~~~~~~~~--~vvv~dpe~i~~v~~~~~~~f~~~~~~~~----~~~~~~~~~~~~~~~~~g~~w  130 (521)
                      +......+.+.||.++.++..+..  .+++++|++++++++.+. .++.......    ....++.   ..++..+|+.|
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~ll~~dg~~H   99 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGD---GSLLTLDGPEH   99 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccc---cceeecCCHHH
Confidence            345567788889988877765543  799999999999995442 2222221111    1222322   22445689999


Q ss_pred             HHHHHHHHhhhcChhhHhhhHHHHHHHHHHHHHHHHHhhcccCCCCCcccchHHHHHHHHHHHHHHhhhcCcCChHhHHH
Q 047776          131 RLLRRNLISEIIHPSRLKSYSHARKWVLQILIDGLNLQAVNNGDRDDRAVKLRDHIQFAMFCLLVLMCFGDKLDEKKIRE  210 (521)
Q Consensus       131 ~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~  210 (521)
                      .++||.+. +.|+++.++++.+.+.+.++++++.+ .        .+..+++.+++..+++++++ .+||.+.++.  ..
T Consensus       100 ~r~Rkl~~-~~F~~~~~~~~~~~i~~~~~~~~~~~-~--------~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~--~~  166 (411)
T COG2124         100 TRLRKLLA-PAFTPRALRGYRPLIREIADRLLDDL-W--------QGGADLVLDFAAELTLRVIA-ELLGVPLEDR--PQ  166 (411)
T ss_pred             HHHHHHhc-cccCHHHHHHHHHHHHHHHHHHHHhc-c--------cCCchhHHHHhhhhhHHHHH-HHhCCCHHHH--HH
Confidence            99999988 99999999999999999999999988 3        13677899999999999999 9999876432  11


Q ss_pred             HHHHHHHHHHhccccccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhhhhhHHHHH
Q 047776          211 VEDVQRLMMLNTRRFNVLNFWPRVTKFVLRKLWGEFFEILKKQESVLLPLIRDRRRMKEEGLSQAKEDENYVLAYVDTLF  290 (521)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  290 (521)
                      +..........        ..|..   .....+.+..+...++.+++..+|++++...             ..|+++.++
T Consensus       167 ~~~~~~~~~~~--------~~~~~---~~~~~~~~~~~a~~~~~~~~~~li~~rR~~~-------------~~dlls~l~  222 (411)
T COG2124         167 LLRWSDALLLR--------LDPDL---GPEEPWRRARAARRELDAYLRALIAERRAAP-------------RDDLLSLLL  222 (411)
T ss_pred             HHHHHHHHHhc--------cCccc---CCcccHHHHHHHHHHHHHHHHHHHHHhccCC-------------cccHHHHHH
Confidence            22221111111        00211   1223456677888999999999999988332             228999999


Q ss_pred             hcCCCccCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcCChHHHHHHHHHhhhcCCccccccchhhhccChhhH
Q 047776          291 DLHLPEENRKLQENEIMSLCSEFLVAGTDTTSNALQWVMANLVKYPDIQEKVFKEIKGVVGDEEIRQVTEDDLQKLPYLK  370 (521)
Q Consensus       291 ~~~~~~~~~~ls~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~klr~Ei~~~~~~~~~~~~~~~~l~~l~~l~  370 (521)
                      .+..+ ++..+|++|+.++++++++||+|||+++++|+++.|++||++++++++|.+.                  ||+.
T Consensus       223 ~a~~~-~~~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~------------------~~~~  283 (411)
T COG2124         223 SAEDD-GGGRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR------------------PLLE  283 (411)
T ss_pred             HHhhC-CCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch------------------HHHH
Confidence            88753 2237999999999999999999999999999999999999999999998663                  7899


Q ss_pred             HHHHhhhcCCCCCcccCccccccceeeccEEecCCcEEEEcccccccCCCCCCCCCCCCCCCcccCCCCCCCccccccCC
Q 047776          371 AVILETLRRHPPARFIEPRALKQDMVLNGFYFPKNAIINFMVAEMGCWDSEVWDDPTSFRPERFLNGEGNGGEVFDITGS  450 (521)
Q Consensus       371 a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~  450 (521)
                      ++|+|+||++||++. ++|.+.+|++++|+.||||+.|+++.+++| |||++|++|++|||+||..              
T Consensus       284 ~~v~E~LR~~ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~an-rDp~~f~~P~~F~p~R~~~--------------  347 (411)
T COG2124         284 AVVEETLRLYPPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAAN-RDPEVFPDPDEFDPERFNN--------------  347 (411)
T ss_pred             HHHHHHHHhCCchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhc-CChhhCCChhhcCCCCCCC--------------
Confidence            999999999999997 899999999999999999999999999999 9999999999999999982              


Q ss_pred             CcccccccCCCCCCCcchHHHHHHHHHHHHHHHHccEEEecCCCCCcccccccceecccCCeeEEeecC
Q 047776          451 REIKMMPFGVGRRICPGQDLAMLHLEYFVANLIWHYEWKAVDGDEVDFEEKQEFTKVMKTPLKAHIHPR  519 (521)
Q Consensus       451 ~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  519 (521)
                         .|+|||+|+|.|+|.+||++|++++++.+|++|++....+ . . ......+..+..+..+.++.|
T Consensus       348 ---~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~-~-~-~~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         348 ---AHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLLLAE-P-P-PLVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             ---CCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCC-C-C-CccccccccCCCcceeeeecC
Confidence               3899999999999999999999999999999999887766 2 2 122233444455555555544


No 33 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=74.39  E-value=10  Score=23.61  Aligned_cols=44  Identities=18%  Similarity=0.273  Sum_probs=37.5

Q ss_pred             HHHHHHHHHHhhhcccchHHHHHHHHHHHhcCChHHHHHHHHHh
Q 047776          304 NEIMSLCSEFLVAGTDTTSNALQWVMANLVKYPDIQEKVFKEIK  347 (521)
Q Consensus       304 ~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~klr~Ei~  347 (521)
                      -++...+..++-.|.|-.+..+.--|....-||+....+.+|++
T Consensus         5 ~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~elr   48 (48)
T PF12554_consen    5 LDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKELR   48 (48)
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHhC
Confidence            46677888888889999999999999999999999988888763


No 34 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=62.71  E-value=9  Score=30.23  Aligned_cols=25  Identities=8%  Similarity=0.192  Sum_probs=15.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhccC
Q 047776            3 TWSVILISLCISALIKAFIHLLRPS   27 (521)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~   27 (521)
                      +|.++++++++++++++++..+|.+
T Consensus         4 l~~iii~~i~l~~~~~~~~~rRR~r   28 (130)
T PF12273_consen    4 LFAIIIVAILLFLFLFYCHNRRRRR   28 (130)
T ss_pred             eHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            4677777777766666665554443


No 35 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=61.49  E-value=25  Score=34.08  Aligned_cols=39  Identities=15%  Similarity=0.113  Sum_probs=25.7

Q ss_pred             hcCCeEEEEeCCccEEEecCHHHHHHHHHhCCccccCCC
Q 047776           67 KFGPATTLHIGFRPVIFICDRSLAHQALIQNGAVFSGRP  105 (521)
Q Consensus        67 kyG~v~~~~~~~~~~vvv~dpe~i~~v~~~~~~~f~~~~  105 (521)
                      +||.|+.-.+-++.+-|=.=|+.-++-+.++.+.|+...
T Consensus       222 rfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~  260 (534)
T KOG3653|consen  222 RFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSLPG  260 (534)
T ss_pred             ccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhccC
Confidence            688888777777766554455566666666766776543


No 36 
>PF15183 MRAP:  Melanocortin-2 receptor accessory protein family
Probab=60.23  E-value=30  Score=24.20  Aligned_cols=22  Identities=14%  Similarity=0.271  Sum_probs=13.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHH
Q 047776            2 ETWSVILISLCISALIKAFIHL   23 (521)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~   23 (521)
                      .+|..+++.+++.++++.+...
T Consensus        41 ~FWv~LA~FV~~lF~iL~~ms~   62 (90)
T PF15183_consen   41 AFWVSLAAFVVFLFLILLYMSW   62 (90)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhc
Confidence            3677777666666665555443


No 37 
>PF11044 TMEMspv1-c74-12:  Plectrovirus spv1-c74 ORF 12 transmembrane protein;  InterPro: IPR022743  This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function. 
Probab=58.82  E-value=23  Score=21.18  Aligned_cols=19  Identities=37%  Similarity=0.445  Sum_probs=10.3

Q ss_pred             CchHHHHHHHHHHHHHHHH
Q 047776            1 METWSVILISLCISALIKA   19 (521)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~   19 (521)
                      |.+|...+.++++++.+++
T Consensus         1 mp~wlt~iFsvvIil~If~   19 (49)
T PF11044_consen    1 MPTWLTTIFSVVIILGIFA   19 (49)
T ss_pred             CchHHHHHHHHHHHHHHHH
Confidence            7788765544444444433


No 38 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=57.71  E-value=3.1  Score=35.39  Aligned_cols=43  Identities=21%  Similarity=0.217  Sum_probs=32.3

Q ss_pred             ChhhHHHHHhhhcCCCCCcccCccccccceeeccEEecCCcEEEE
Q 047776          366 LPYLKAVILETLRRHPPARFIEPRALKQDMVLNGFYFPKNAIINF  410 (521)
Q Consensus       366 l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~  410 (521)
                      -+...|||.|+.-+..-..  +.=+..+|+.++|..||||+.|.-
T Consensus        52 ~n~I~A~V~~~qtv~~Gs~--vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   52 KNTIRAVVDGTQTVVDGSR--VRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCeEEEEEecceEEeCCCE--EEEEEcCceEECCEEeCCCCEEEE
Confidence            4557899999987775442  222346899999999999999854


No 39 
>PRK06789 flagellar motor switch protein; Validated
Probab=48.68  E-value=26  Score=24.32  Aligned_cols=42  Identities=12%  Similarity=0.018  Sum_probs=33.2

Q ss_pred             HHHHhhhcCCCCCcccCccccccce--eeccEEecCCcEEEEcc
Q 047776          371 AVILETLRRHPPARFIEPRALKQDM--VLNGFYFPKNAIINFMV  412 (521)
Q Consensus       371 a~i~E~lRl~p~~~~~~~R~~~~d~--~i~g~~ip~g~~v~~~~  412 (521)
                      .-++|.|.|.+....-+-|.+.+++  .++|..|.+|..|.++-
T Consensus        20 ~~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~~   63 (74)
T PRK06789         20 KKIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKNG   63 (74)
T ss_pred             eEHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEECC
Confidence            4578899999988777777776654  45999999999998753


No 40 
>PF15050 SCIMP:  SCIMP protein
Probab=46.16  E-value=38  Score=25.63  Aligned_cols=12  Identities=8%  Similarity=0.628  Sum_probs=7.4

Q ss_pred             hHHHHHHHHHHH
Q 047776            3 TWSVILISLCIS   14 (521)
Q Consensus         3 ~~~~~~~~~~~~   14 (521)
                      +|.+++++++++
T Consensus         8 FWiiLAVaII~v   19 (133)
T PF15050_consen    8 FWIILAVAIILV   19 (133)
T ss_pred             hHHHHHHHHHHH
Confidence            677766665544


No 41 
>PF11446 DUF2897:  Protein of unknown function (DUF2897);  InterPro: IPR021550  This is a bacterial family of uncharacterised proteins. 
Probab=43.31  E-value=40  Score=21.78  Aligned_cols=25  Identities=20%  Similarity=0.247  Sum_probs=18.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhcc
Q 047776            2 ETWSVILISLCISALIKAFIHLLRP   26 (521)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~   26 (521)
                      ..|.++++++.+++..+..+++...
T Consensus         4 ~~wlIIviVlgvIigNia~LK~sAk   28 (55)
T PF11446_consen    4 NPWLIIVIVLGVIIGNIAALKYSAK   28 (55)
T ss_pred             hhhHHHHHHHHHHHhHHHHHHHhcc
Confidence            4677888888888887777776544


No 42 
>PHA03049 IMV membrane protein; Provisional
Probab=42.23  E-value=71  Score=21.30  Aligned_cols=17  Identities=12%  Similarity=0.261  Sum_probs=7.0

Q ss_pred             CCCCCCCCCCCCCcccc
Q 047776           30 FNYKLPPGPWNFPIIGN   46 (521)
Q Consensus        30 ~~~~~~Pgp~~~p~lG~   46 (521)
                      .....||.|...+..-+
T Consensus        28 ~~q~~~p~~e~ye~~e~   44 (68)
T PHA03049         28 TTSQNPPSQEKYEKMED   44 (68)
T ss_pred             ccCCCCCChhhccCchh
Confidence            34444554433333333


No 43 
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl    5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and    metabolism]
Probab=40.13  E-value=45  Score=30.57  Aligned_cols=70  Identities=13%  Similarity=0.197  Sum_probs=42.8

Q ss_pred             HHHHHhhhcCCCCC---cccCccccccceee----ccEEecCCcEEEEcccccccCCCCCCCCCCCCCCCcccCCCCCCC
Q 047776          370 KAVILETLRRHPPA---RFIEPRALKQDMVL----NGFYFPKNAIINFMVAEMGCWDSEVWDDPTSFRPERFLNGEGNGG  442 (521)
Q Consensus       370 ~a~i~E~lRl~p~~---~~~~~R~~~~d~~i----~g~~ip~g~~v~~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~  442 (521)
                      +.+|+.|..+.||.   |+.+.=.++.|..+    =.-.|.+||.|.++    .                          
T Consensus       276 er~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~----G--------------------------  325 (361)
T COG1759         276 ERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMG----G--------------------------  325 (361)
T ss_pred             HHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccC----C--------------------------
Confidence            56888889999975   33333333444332    12357777776544    1                          


Q ss_pred             ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHH
Q 047776          443 EVFDITGSREIKMMPFGVGRRICPGQDLAMLHLEYFVA  480 (521)
Q Consensus       443 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~  480 (521)
                              ++++++-||.+  +-+||++|. |+|.++-
T Consensus       326 --------spYs~l~~~~p--ms~GrRIA~-EIk~A~e  352 (361)
T COG1759         326 --------SPYSNLYWGEP--MSTGRRIAR-EIKEAIE  352 (361)
T ss_pred             --------CcchhhhcCCC--cchhhHHHH-HHHHHHH
Confidence                    13555666554  678999998 8887764


No 44 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=37.62  E-value=28  Score=22.60  Aligned_cols=25  Identities=24%  Similarity=0.435  Sum_probs=18.6

Q ss_pred             HHHHHHhcCChHHHHHHHHHhhhcC
Q 047776          327 WVMANLVKYPDIQEKVFKEIKGVVG  351 (521)
Q Consensus       327 ~~l~~L~~~p~~q~klr~Ei~~~~~  351 (521)
                      -++.+|..||++.++|.+.=.+.+|
T Consensus         4 ~iV~YLv~nPevl~kl~~g~asLIG   28 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGEASLIG   28 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCCeeEec
Confidence            4577899999999999775444433


No 45 
>PF05393 Hum_adeno_E3A:  Human adenovirus early E3A glycoprotein;  InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=36.75  E-value=1.1e+02  Score=21.87  Aligned_cols=18  Identities=11%  Similarity=-0.022  Sum_probs=7.7

Q ss_pred             HHHHHHHHHHHHHHHhcc
Q 047776            9 ISLCISALIKAFIHLLRP   26 (521)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~   26 (521)
                      +.+++++.++.....+++
T Consensus        43 iFil~VilwfvCC~kRkr   60 (94)
T PF05393_consen   43 IFILLVILWFVCCKKRKR   60 (94)
T ss_pred             HHHHHHHHHHHHHHHhhh
Confidence            334444444444443433


No 46 
>COG3423 Nlp Predicted transcriptional regulator [Transcription]
Probab=35.49  E-value=2.6  Score=28.69  Aligned_cols=28  Identities=21%  Similarity=0.328  Sum_probs=23.2

Q ss_pred             EecCCcEEEEcccccccCCCCCCCCCCCCCCCcccCC
Q 047776          401 YFPKNAIINFMVAEMGCWDSEVWDDPTSFRPERFLNG  437 (521)
Q Consensus       401 ~ip~g~~v~~~~~~~~~~d~~~~~~p~~F~P~R~l~~  437 (521)
                      .-|||..++...-.++         |++-+|+||++.
T Consensus        45 p~pkgEriIA~algv~---------P~eIWp~RY~d~   72 (82)
T COG3423          45 PWPKGERIIADALGVP---------PEEIWPSRYADP   72 (82)
T ss_pred             CCchHHHHHHHHhCCC---------HHHhCchhhccc
Confidence            4678888888877777         899999999987


No 47 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=33.76  E-value=19  Score=22.88  Aligned_cols=11  Identities=45%  Similarity=0.900  Sum_probs=9.3

Q ss_pred             cccCCCCCCCc
Q 047776          456 MPFGVGRRICP  466 (521)
Q Consensus       456 ~~Fg~G~r~C~  466 (521)
                      .+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            47999999985


No 48 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=32.60  E-value=14  Score=35.36  Aligned_cols=44  Identities=14%  Similarity=0.100  Sum_probs=32.4

Q ss_pred             ChhhHHHHHhhhcCCCCCcccCccccccceeeccEEecCCcEEEEc
Q 047776          366 LPYLKAVILETLRRHPPARFIEPRALKQDMVLNGFYFPKNAIINFM  411 (521)
Q Consensus       366 l~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~  411 (521)
                      -+.+.|||.|+.-+.-...  +.=+..+|+.++|..|||||.|.-.
T Consensus       255 ~n~I~A~V~~~qtv~~G~~--vrlRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       255 RNTIRACVHETQTVVDGSA--VKLRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCceEEEEcCceEEecCCE--EEEEEcCceeeCCEEecCCCEEEEE
Confidence            3557889999888775432  2223468999999999999988543


No 49 
>PF05084 GRA6:  Granule antigen protein (GRA6);  InterPro: IPR008119  Toxoplasma gondii is an obligate intracellular apicomplexan protozoan parasite, with a complex lifestyle involving varied hosts []. It has two phases of growth: an intestinal phase in feline hosts, and an extra-intestinal phase in other mammals. Oocysts from infected cats develop into tachyzoites, and eventually, bradyzoites and zoitocysts in the extraintestinal host []. Transmission of the parasite occurs through contact with infected cats or raw/undercooked meat; in immunocompromised individuals, it can cause severe and often lethal toxoplasmosis. Acute infection in healthy humans can sometimes also cause tissue damage [].  The protozoan utilises a variety of secretory and antigenic proteins to invade a host and gain access to the intracellular environment []. These originate from distinct organelles in the T. gondii cell termed micronemes, rhoptries, and dense granules. They are released at specific times during invasion to ensure the proteins are allocated to their correct target destinations []. Dense granule antigens (GRAs) are released from the T. gondii tachyzoite while still encapsulated in a host vacuole. Gra6, one of these moieties, is associated with the parasitophorous vacuole []. It possesses a hydrophobic central region flanked by two hydrophilic domains, and is present as a single copy gene in the Toxoplasma gondii genome []. Gra6 shares a similar function with Gra2, in that it is rapidly targeted to a network of membranous tubules that connect with the vacuolar membrane []. Indeed, these two proteins, together with Gra4, form a multimeric complex that stabilises the parasite within the vacuole.
Probab=32.11  E-value=93  Score=25.01  Aligned_cols=7  Identities=43%  Similarity=0.918  Sum_probs=4.0

Q ss_pred             CCCCCCC
Q 047776           33 KLPPGPW   39 (521)
Q Consensus        33 ~~~Pgp~   39 (521)
                      +.||-|.
T Consensus       177 rsppeps  183 (215)
T PF05084_consen  177 RSPPEPS  183 (215)
T ss_pred             CCCCCCC
Confidence            4566665


No 50 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=29.71  E-value=53  Score=25.79  Aligned_cols=22  Identities=23%  Similarity=0.519  Sum_probs=16.6

Q ss_pred             CCcchHHHHHHHHHHHHHHHHc
Q 047776          464 ICPGQDLAMLHLEYFVANLIWH  485 (521)
Q Consensus       464 ~C~G~~lA~~e~~~~l~~ll~~  485 (521)
                      .|.|+.||+.++-.++.+++..
T Consensus        19 N~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   19 NCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             ETTS----HHHHHHHHHHHHHS
T ss_pred             cccchHHHHHHHHHHHHHHhcC
Confidence            7999999999999999999874


No 51 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=29.53  E-value=95  Score=24.36  Aligned_cols=39  Identities=18%  Similarity=0.202  Sum_probs=29.5

Q ss_pred             CCchHHHHHHHHhcCCeEEEEeCCccEEEecCHHHHHHHHH
Q 047776           55 LDLEPMIHDLHKKFGPATTLHIGFRPVIFICDRSLAHQALI   95 (521)
Q Consensus        55 ~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dpe~i~~v~~   95 (521)
                      .+....+++|.++||.+--  ..+..++...|++.+.++..
T Consensus        74 ~~v~~~i~~w~~~~g~v~l--~~~~~~l~~~d~~~l~~l~~  112 (129)
T PF13625_consen   74 QNVEQSIEDWARRYGRVRL--YKGAYLLECDDPELLDELLA  112 (129)
T ss_pred             HHHHHHHHHHHHhcCCEEE--ecCeEEEEECCHHHHHHHHh
Confidence            3456789999999998742  22355678889999999983


No 52 
>PF07849 DUF1641:  Protein of unknown function (DUF1641);  InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long. 
Probab=25.44  E-value=70  Score=19.27  Aligned_cols=18  Identities=17%  Similarity=0.281  Sum_probs=14.4

Q ss_pred             HHHHHHHhcCChHHHHHH
Q 047776          326 QWVMANLVKYPDIQEKVF  343 (521)
Q Consensus       326 ~~~l~~L~~~p~~q~klr  343 (521)
                      .|-++.++++||+|.-|.
T Consensus        13 l~gl~~~l~DpdvqrgL~   30 (42)
T PF07849_consen   13 LFGLLRALRDPDVQRGLG   30 (42)
T ss_pred             HHHHHHHHcCHHHHHHHH
Confidence            466778899999998774


No 53 
>PRK11677 hypothetical protein; Provisional
Probab=24.99  E-value=1.1e+02  Score=24.32  Aligned_cols=20  Identities=30%  Similarity=0.526  Sum_probs=11.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q 047776            4 WSVILISLCISALIKAFIHL   23 (521)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~   23 (521)
                      |.++++++++.+++-+++.+
T Consensus         3 W~~a~i~livG~iiG~~~~R   22 (134)
T PRK11677          3 WEYALIGLVVGIIIGAVAMR   22 (134)
T ss_pred             HHHHHHHHHHHHHHHHHHHh
Confidence            66666666665555555443


No 54 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=24.86  E-value=2.5e+02  Score=20.13  Aligned_cols=50  Identities=12%  Similarity=0.198  Sum_probs=41.8

Q ss_pred             CCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcCChHHHHHHHHHhhhc
Q 047776          301 LQENEIMSLCSEFLVAGTDTTSNALQWVMANLVKYPDIQEKVFKEIKGVV  350 (521)
Q Consensus       301 ls~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~klr~Ei~~~~  350 (521)
                      -+...........++--+..++..+.-.+.+-++||+..+++.+.+..-+
T Consensus        29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            34556666777888899999999999999999999999999988877644


No 55 
>PHA01346 hypothetical protein
Probab=24.59  E-value=62  Score=19.17  Aligned_cols=17  Identities=35%  Similarity=0.604  Sum_probs=12.8

Q ss_pred             cCCh-HHHHHHHHHhhhc
Q 047776          334 KYPD-IQEKVFKEIKGVV  350 (521)
Q Consensus       334 ~~p~-~q~klr~Ei~~~~  350 (521)
                      .+|+ -|+|+.+|+++.+
T Consensus        28 sdpdfsqekihaeldsll   45 (53)
T PHA01346         28 SDPDFSQEKIHAELDSLL   45 (53)
T ss_pred             CCCCccHHHHHHHHHHHH
Confidence            4676 5789999988765


No 56 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=24.42  E-value=60  Score=23.17  Aligned_cols=22  Identities=18%  Similarity=0.363  Sum_probs=18.9

Q ss_pred             HHHHHHHHHHHHHccEEEecCC
Q 047776          472 MLHLEYFVANLIWHYEWKAVDG  493 (521)
Q Consensus       472 ~~e~~~~l~~ll~~f~~~~~~~  493 (521)
                      -..|+-++.++|+.|||.+++.
T Consensus        59 p~~IrdAVsqVLkGYDWtLVPm   80 (84)
T PF12444_consen   59 PVCIRDAVSQVLKGYDWTLVPM   80 (84)
T ss_pred             cHHHHHHHHHHhccCCceeeec
Confidence            3568999999999999999863


No 57 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=24.09  E-value=2e+02  Score=18.16  Aligned_cols=35  Identities=20%  Similarity=0.256  Sum_probs=24.4

Q ss_pred             HHHHHHhcCCeEEEEeCCc----cEEEecCHHHHHHHHH
Q 047776           61 IHDLHKKFGPATTLHIGFR----PVIFICDRSLAHQALI   95 (521)
Q Consensus        61 ~~~~~~kyG~v~~~~~~~~----~~vvv~dpe~i~~v~~   95 (521)
                      +.++..+||+|-.+.+...    -+|-..+++.++....
T Consensus         1 L~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    1 LYKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             ChHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            3567789999988886553    2455568888888874


No 58 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=23.31  E-value=1.2e+02  Score=22.61  Aligned_cols=60  Identities=25%  Similarity=0.275  Sum_probs=40.2

Q ss_pred             CCCCCCCCCCCCCcccchhhhhhcCCCchHHHHHHHHhcCCeEEEEeCCc------cEEEecCHHHHHHHH
Q 047776           30 FNYKLPPGPWNFPIIGNILLARKSVLDLEPMIHDLHKKFGPATTLHIGFR------PVIFICDRSLAHQAL   94 (521)
Q Consensus        30 ~~~~~~Pgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~------~~vvv~dpe~i~~v~   94 (521)
                      .+.+.||-...+-++.|++.-     -..+-+-++.-+||+|..+++|..      -+||-.|-..++...
T Consensus         9 ~~~rlppevnriLyirNLp~~-----ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~   74 (124)
T KOG0114|consen    9 QNIRLPPEVNRILYIRNLPFK-----ITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKAC   74 (124)
T ss_pred             CCCCCChhhheeEEEecCCcc-----ccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHH
Confidence            355667776667677776432     123456777889999999998853      356666666666665


No 59 
>COG2991 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.12  E-value=1.5e+02  Score=20.27  Aligned_cols=25  Identities=8%  Similarity=0.034  Sum_probs=17.8

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHhc
Q 047776            1 METWSVILISLCISALIKAFIHLLR   25 (521)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~   25 (521)
                      |++|.+.+.+++++++.+.+=+...
T Consensus         1 M~t~lltFg~Fllvi~gMsiG~I~k   25 (77)
T COG2991           1 MTTFLLTFGIFLLVIAGMSIGYIFK   25 (77)
T ss_pred             CccHHHHHHHHHHHHHHHhHhhhee
Confidence            7888888877777777777555443


No 60 
>PF05568 ASFV_J13L:  African swine fever virus J13L protein;  InterPro: IPR008385 This family consists of several African swine fever virus (ASFV) j13L proteins [, , ].
Probab=22.93  E-value=98  Score=24.35  Aligned_cols=19  Identities=16%  Similarity=0.338  Sum_probs=7.7

Q ss_pred             HHHHHHHHHHHHHHHHHHh
Q 047776            6 VILISLCISALIKAFIHLL   24 (521)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~   24 (521)
                      +++.++++++++++++.+.
T Consensus        34 ILiaIvVliiiiivli~lc   52 (189)
T PF05568_consen   34 ILIAIVVLIIIIIVLIYLC   52 (189)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            3443333444444444443


No 61 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=22.90  E-value=1.9e+02  Score=20.77  Aligned_cols=42  Identities=19%  Similarity=0.314  Sum_probs=25.8

Q ss_pred             HHHhhhcccchHHHHHHHHHHHhc-------CChHHHHHHHHHhhhcCC
Q 047776          311 SEFLVAGTDTTSNALQWVMANLVK-------YPDIQEKVFKEIKGVVGD  352 (521)
Q Consensus       311 ~~~~~ag~~tt~~~l~~~l~~L~~-------~p~~q~klr~Ei~~~~~~  352 (521)
                      +++++.=..||+.++.-=|-.++.       .|++...+|+||.+++..
T Consensus         4 ~dff~~r~~~Sa~~AkeRLQiilA~eR~~~~~pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851           4 FDFFFSRKKNSAETAKERLQLILAHERAAGLQPDYLEQLRKEILEVISK   52 (88)
T ss_pred             HHHHHhcCCCcHHHHHHHHHHhhhhhhhcCCCcchHHHHHHHHHHHHHH
Confidence            334443233555555544444332       389999999999988753


No 62 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=22.49  E-value=58  Score=21.42  Aligned_cols=8  Identities=50%  Similarity=0.883  Sum_probs=6.2

Q ss_pred             CCCcccCC
Q 047776          430 RPERFLNG  437 (521)
Q Consensus       430 ~P~R~l~~  437 (521)
                      ||||||..
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            78888864


No 63 
>TIGR02736 cbb3_Q_epsi cytochrome c oxidase, cbb3-type, CcoQ subunit, epsilon-Proteobacterial. Members of this protein family are restricted to the epsilon branch of the Proteobacteria. All members are found in operons containing the other three structural subunits of the cbb3 type of cytochrome c oxidase. These small proteins show remote sequence similarity to the CcoQ subunit in other cytochrome c oxidase systems, so this family is assumed to represent the epsilonproteobacterial variant of CcoQ.
Probab=22.34  E-value=1.5e+02  Score=19.10  Aligned_cols=12  Identities=33%  Similarity=0.365  Sum_probs=4.6

Q ss_pred             HHHHHHHhccCC
Q 047776           17 IKAFIHLLRPSK   28 (521)
Q Consensus        17 ~~~~~~~~~~~~   28 (521)
                      +-.++..++++.
T Consensus        15 LYgY~yhLYrse   26 (56)
T TIGR02736        15 LYAYIYHLYRSQ   26 (56)
T ss_pred             HHHHHHHhhhhh
Confidence            333333333343


No 64 
>PRK05933 type III secretion system protein; Validated
Probab=21.37  E-value=1.1e+02  Score=28.20  Aligned_cols=45  Identities=20%  Similarity=0.153  Sum_probs=34.6

Q ss_pred             hhHHHHHhhhcCCCCCcccCcccc-cc--ceeeccEEecCCcEEEEcc
Q 047776          368 YLKAVILETLRRHPPARFIEPRAL-KQ--DMVLNGFYFPKNAIINFMV  412 (521)
Q Consensus       368 ~l~a~i~E~lRl~p~~~~~~~R~~-~~--d~~i~g~~ip~g~~v~~~~  412 (521)
                      -+..-|+|.|+|.+....-+-|.+ .+  |+.++|..|.+|..|.++-
T Consensus       316 RT~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVdd  363 (372)
T PRK05933        316 RYSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALGD  363 (372)
T ss_pred             cccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEECC
Confidence            356789999999998765554554 34  5667999999999998763


No 65 
>PF09105 SelB-wing_1:  Elongation factor SelB, winged helix ;  InterPro: IPR015189 This entry represents a domain with a winged helix-type fold, which consists of a closed 3-helical bundle with a right-handed twist, and a small beta-sheet wing []. Different winged helix domains share a common structure, but can differ in sequence. This entry is designated "type 1".  The winged helix motif is involved in both DNA and RNA binding. In the elongation factor SelB, the winged helix domains recognise RNA, allowing the complex to wrap around the small ribosomal subunit. In bacteria, the incorporation of the amino acid selenocysteine into proteins requires elongation factor SelB, which binds both transfer RNA (tRNA) and mRNA. SelB binds to an mRNA hairpin formed by the selenocysteine insertion sequence (SECIS) with extremely high specificity []. ; PDB: 2V9V_A 1LVA_A 2PLY_A.
Probab=21.35  E-value=1.3e+02  Score=18.39  Aligned_cols=20  Identities=30%  Similarity=0.263  Sum_probs=12.4

Q ss_pred             CCHHHHHHHHHHHhhhcccc
Q 047776          301 LQENEIMSLCSEFLVAGTDT  320 (521)
Q Consensus       301 ls~~~i~~~~~~~~~ag~~t  320 (521)
                      ++.+|....+-.+..||.-|
T Consensus        29 lsleetrkllqsmaaagqvt   48 (61)
T PF09105_consen   29 LSLEETRKLLQSMAAAGQVT   48 (61)
T ss_dssp             --HHHHHHHHHHHHHTTSEE
T ss_pred             ccHHHHHHHHHHHHhcCceE
Confidence            66777777777777777644


No 66 
>PF06576 DUF1133:  Protein of unknown function (DUF1133);  InterPro: IPR010557 This family consists of a number of hypothetical proteins from Escherichia coli O157:H7 and Salmonella typhi. The function of this family is unknown.
Probab=21.16  E-value=3.9e+02  Score=22.16  Aligned_cols=46  Identities=20%  Similarity=0.256  Sum_probs=26.6

Q ss_pred             CChHHHHHHHHHhhhcCCccccccchhhhccChhhHHHHHhhhcCCCCCc
Q 047776          335 YPDIQEKVFKEIKGVVGDEEIRQVTEDDLQKLPYLKAVILETLRRHPPAR  384 (521)
Q Consensus       335 ~p~~q~klr~Ei~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~  384 (521)
                      .||++..+++=++.--.+.-....+.+.+    .+|.+|.|+|..+|+.-
T Consensus        74 k~EL~~~~~eil~gK~kS~La~ctD~Eal----~iDrVI~~vL~~~~gl~  119 (176)
T PF06576_consen   74 KPELEAFLREILNGKQKSWLAFCTDDEAL----FIDRVIGEVLAEHPGLI  119 (176)
T ss_pred             cHHHHHHHHHHhCcccccccceecchHHH----HHHHHHHHHHHhCcchH
Confidence            56666666555443322211011233333    68999999999998764


No 67 
>PF10717 ODV-E18:  Occlusion-derived virus envelope protein ODV-E18;  InterPro: IPR019655  Baculovirus occlusion-derived virus (ODV) derives its envelope from an intranuclear membrane source. Occlusion-derived viral envelope proteins that are detected in viral-induced intranuclear microvesicles, but not detected in the plasma membrane, cytoplasmic membranes, or the nuclear envelope. This entry represents ODV-E18 protein which is encoded by baculovirus late genes with transcription initiating from a TAAG motif. ODV-E18 exists as a dimer in the ODV envelope, which contains a hydrophobic domain that putatively acts as a target or retention signal for intranuclear microvesicles []. ; GO: 0019031 viral envelope
Probab=20.78  E-value=2.8e+02  Score=19.68  Aligned_cols=20  Identities=30%  Similarity=0.318  Sum_probs=8.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHh
Q 047776            5 SVILISLCISALIKAFIHLL   24 (521)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~   24 (521)
                      +.+++++++++++..+....
T Consensus        28 MtILivLVIIiLlImlfqsS   47 (85)
T PF10717_consen   28 MTILIVLVIIILLIMLFQSS   47 (85)
T ss_pred             HHHHHHHHHHHHHHHHHhcc
Confidence            33444444444333343333


No 68 
>TIGR02976 phageshock_pspB phage shock protein B. This model describes the PspB protein of the psp (phage shock protein) operon, as found in Escherichia coli and many related species. Expression of a phage protein called secretin protein IV, and a number of other stresses including ethanol, heat shock, and defects in protein secretion trigger sigma-54-dependent expression of the phage shock regulon. PspB is both a regulator and an effector protein of the phage shock response.
Probab=20.41  E-value=1.4e+02  Score=20.83  Aligned_cols=9  Identities=11%  Similarity=0.128  Sum_probs=3.5

Q ss_pred             HHHHHHHHh
Q 047776           16 LIKAFIHLL   24 (521)
Q Consensus        16 ~~~~~~~~~   24 (521)
                      .++.+.+|.
T Consensus        19 p~wl~lHY~   27 (75)
T TIGR02976        19 PLWLILHYR   27 (75)
T ss_pred             HHHHHHHHH
Confidence            333344444


No 69 
>PF05545 FixQ:  Cbb3-type cytochrome oxidase component FixQ;  InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=20.19  E-value=2e+02  Score=17.84  Aligned_cols=13  Identities=31%  Similarity=0.411  Sum_probs=5.2

Q ss_pred             HHHHHHHHHhccC
Q 047776           15 ALIKAFIHLLRPS   27 (521)
Q Consensus        15 ~~~~~~~~~~~~~   27 (521)
                      +++.++++..+++
T Consensus        21 ~F~gi~~w~~~~~   33 (49)
T PF05545_consen   21 FFIGIVIWAYRPR   33 (49)
T ss_pred             HHHHHHHHHHccc
Confidence            3333344444443


No 70 
>KOG0149 consensus Predicted RNA-binding protein SEB4 (RRM superfamily) [General function prediction only]
Probab=20.13  E-value=1.1e+02  Score=26.65  Aligned_cols=49  Identities=12%  Similarity=0.169  Sum_probs=29.1

Q ss_pred             cccchhhhhhcCCCchHHHHHHHHhcCCeEEEEe---------CCccEEEecCHHHHHHHHHh
Q 047776           43 IIGNILLARKSVLDLEPMIHDLHKKFGPATTLHI---------GFRPVIFICDRSLAHQALIQ   96 (521)
Q Consensus        43 ~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~---------~~~~~vvv~dpe~i~~v~~~   96 (521)
                      ++|.+.+-     ...+.+.+..++||+|+-..+         -|-.+|-..|+|.+....+.
T Consensus        16 fVggL~w~-----T~~~~l~~yFeqfGeI~eavvitd~~t~rskGyGfVTf~d~~aa~rAc~d   73 (247)
T KOG0149|consen   16 FVGGLAWE-----THKETLRRYFEQFGEIVEAVVITDKNTGRSKGYGFVTFRDAEAATRACKD   73 (247)
T ss_pred             EEcCcccc-----cchHHHHHHHHHhCceEEEEEEeccCCccccceeeEEeecHHHHHHHhcC
Confidence            45655544     445778999999999873221         11234555566666666633


Done!