BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047778
(135 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FGJ6|ATL79_ARATH RING-H2 finger protein ATL79 OS=Arabidopsis thaliana GN=ATL79 PE=2
SV=1
Length = 166
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 80/134 (59%), Gaps = 22/134 (16%)
Query: 1 LFCALTCALALNTAIRCFLRDNNNYDQQRRTPSPSPQNQHQQQRNNNKPSAEAAAAHT-- 58
+ AL CAL+L AIRCFLR + +++KP EAAA+ T
Sbjct: 47 VISALICALSLYAAIRCFLRPT------------------LETEDDHKPDPEAAASSTPT 88
Query: 59 --LVVYSAGIKLTGAEAECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPIC 116
+VYS+ ++L GAEAEC ICLSEF +G+ IQVLE+C+HGFH +CI KWL + SCP C
Sbjct: 89 TPTLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTC 148
Query: 117 RCNCLFSPTSTPTS 130
R + + TP+S
Sbjct: 149 RTSIFSQHSETPSS 162
>sp|Q6NQG7|ATL78_ARATH RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2
SV=1
Length = 219
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 69/122 (56%), Gaps = 7/122 (5%)
Query: 1 LFCALTCALALNTAIRCFLRDNNNYDQQRRTPSPSPQNQHQQQRNNNKPSAEAAAAHTLV 60
L CAL C+L LN+ IRC LR +N PS + + + + N +A + V
Sbjct: 63 LLCALVCSLGLNSIIRCALRCSN------LVPSEAGGDNYPVRLTNTGVKRKALKSFQTV 116
Query: 61 VYSAGIKLTGAEAECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICRCNC 120
YS + L G + EC ICLSEFV + +++L C HGFH +CI KWL SH SCP CR +C
Sbjct: 117 SYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCR-HC 175
Query: 121 LF 122
L
Sbjct: 176 LI 177
>sp|P0C034|ATL10_ARATH RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2
SV=1
Length = 251
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 1 LFCALTCALALNTAIRCFLRDNNNYDQQRRTPSPSPQNQHQQQRNNNKPSAEAAAAHTLV 60
L C + C L L+ IRC LR + + P P + +N +A +V
Sbjct: 65 LICGIICCLGLHYIIRCALRRSTRF----MISEPVPSLSSTRGSSNKGIKKKALRMFPVV 120
Query: 61 VYSAGIKLTGAEAECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICRCNC 120
YS + L G + ECVICLS+FV G+ +++L +C HGFH +CI KWL H +CP CR NC
Sbjct: 121 SYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCR-NC 179
Query: 121 L 121
L
Sbjct: 180 L 180
>sp|Q9FLC6|ATL73_ARATH RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2
SV=1
Length = 176
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 65/117 (55%), Gaps = 9/117 (7%)
Query: 1 LFCALTCALALNTAIRCFLRDNNNYDQQRRTPSPSPQNQHQQQRNNNKPSAEAAAAHTLV 60
L CAL CAL +N+ +RC LR +R TP+ P + + N + A +
Sbjct: 48 LLCALICALGINSVLRCVLRCT-----RRFTPNEDPVDTNA----NVAKGIKKRALKVIP 98
Query: 61 VYSAGIKLTGAEAECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICR 117
V S +L EC+ICL +FVEG+ ++VL +C HGFH +CI WL SH SCP CR
Sbjct: 99 VDSYSPELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCR 155
>sp|Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2
SV=1
Length = 181
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 67/123 (54%), Gaps = 2/123 (1%)
Query: 1 LFCALTCALALNTAIRCFLRDNNNYDQQRRTPSPSPQNQHQQQRNNNKPSAEAAAAHTLV 60
L CAL CAL+LN+A+RC LR + + + S N + + + A V
Sbjct: 40 LLCALICALSLNSALRCVLRITRRFTSDDQVSNASNANANLGRLAAATGLKKQALKQIPV 99
Query: 61 -VYSAGIKLTGAEAECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICRCN 119
+Y +GI + EC+ICL +F +G+ ++VL +C HGFH +CI WL S SCP CR +
Sbjct: 100 GLYGSGI-IDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQS 158
Query: 120 CLF 122
L
Sbjct: 159 LLL 161
>sp|Q9LS99|ATL77_ARATH RING-H2 finger protein ATL77 OS=Arabidopsis thaliana GN=ATL77 PE=2
SV=1
Length = 220
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Query: 1 LFCALTCALALNTAIRC-FLRDNNNYDQQRRTPSPSPQNQHQQQRNNNKPSAEAAAAHTL 59
L C + C+L L+ IRC F+R + + +P++ N +A +
Sbjct: 59 LLCGIICSLGLHYIIRCAFIRSRSFMISDPISIPSTPRDSSV----NKGIKKKALKMLPV 114
Query: 60 VVYSAGIKLTGAEAECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICR 117
V YS I L G ECVICLS+FV G+ ++VL +C HGFH +CI KWL H +CP CR
Sbjct: 115 VNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCPKCR 172
>sp|Q6NML0|ATL76_ARATH E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana GN=ATL76
PE=1 SV=1
Length = 225
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 1 LFCALTCALALNTAIRCFLRDNNNYDQQRRTPSPSPQNQHQQQRNNNKPSAEAAAAHTLV 60
L C + C L L+ IRC R ++ + P + +N +A +V
Sbjct: 65 LICGIICCLGLHYIIRCAFRRSSRF----MISEPISSLSTPRSSSNKGIKKKALRMFPVV 120
Query: 61 VYSAGIKLTGAEAECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICR 117
YS + L G ECVICLS+FV G+ +++L +C HGFH +CI KWL H +CP CR
Sbjct: 121 SYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCR 177
>sp|Q94BY6|ATL75_ARATH RING-H2 finger protein ATL75 OS=Arabidopsis thaliana GN=ATL75 PE=2
SV=1
Length = 226
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 1 LFCALTCALALNTAIRCFLRDNNNYDQQRRTPSPSPQNQHQQQRNNNKPSAEAAAAHTLV 60
L C + C L L+ IRC R +++ S + N K A +V
Sbjct: 66 LICGIICCLGLHYIIRCAFRRTSSFMISEPIAGLSTPCGSSNKGINKK----ALRMFPVV 121
Query: 61 VYSAGIKLTGAEAECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICR 117
YS + L G ECVICLS+FV G+ I++L +C HGFH +CI KWL H +CP CR
Sbjct: 122 SYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCR 178
>sp|O22755|ATL44_ARATH RING-H2 finger protein ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2
SV=1
Length = 185
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
Query: 1 LFCALTCALALNTAIRC-FLRDNNNYDQQRRTPSPSPQNQHQQQRNNNKPSAEAAAAHTL 59
L CAL C L +RC +LR SPSP +++ + P + AA +
Sbjct: 35 LLCALICVAGLAAVVRCAWLRRFTAGGD-----SPSPNKGLKKKALQSLPRSTFTAAES- 88
Query: 60 VVYSAGIKLTGAEAECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICR 117
S G EC ICL++F +G+ I+VL C H FH +CI KWL S SCP CR
Sbjct: 89 --TSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCR 144
>sp|Q8LC69|ATL8_ARATH RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2
SV=2
Length = 185
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 57/121 (47%), Gaps = 13/121 (10%)
Query: 1 LFCALTCALALNTAIRC-FLR---DNNNYDQQRRTPSPSPQNQHQQQRNNNKPSAEAAAA 56
L CALTC + L RC +LR N DQ P + +++ + P
Sbjct: 35 LLCALTCIIGLIAVSRCAWLRRIASRNRSDQTHPPPVAAANKGLKKKVLRSLPK------ 88
Query: 57 HTLVVYSAGIKLTGAEAECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPIC 116
+ YS EC ICL+EF GD ++VL +C HGFH CI WL SH SCP C
Sbjct: 89 ---LTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSC 145
Query: 117 R 117
R
Sbjct: 146 R 146
>sp|Q9LM69|ATL80_ARATH RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=1
SV=1
Length = 197
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 57/129 (44%), Gaps = 24/129 (18%)
Query: 1 LFCALTCALALNTAIRCF----LRDNNNYDQQRRTPSPSPQNQHQQQRNNNKPSAEAAAA 56
L CAL C L L RC L N +T SP P P A A
Sbjct: 37 LLCALICVLGLIAVSRCVWLRRLAAGNRTVSGSQTQSPQP------------PVAAANKG 84
Query: 57 HTLVVYSAGIKLTGAE--------AECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLY 108
V + KLT + AEC ICL+EF GD ++VL +C HGFH CI WL
Sbjct: 85 LKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLG 144
Query: 109 SHYSCPICR 117
SH SCP CR
Sbjct: 145 SHSSCPSCR 153
>sp|Q9ZT49|ATL45_ARATH RING-H2 finger protein ATL45 OS=Arabidopsis thaliana GN=ATL45 PE=2
SV=1
Length = 200
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Query: 1 LFCALTCALALNTAIRC-FLRDNNNYDQQRRTPSPSPQNQHQQQRNNNKPSAEAAAAHTL 59
L CAL C L RC +LR + +P P +++ P + A+ +
Sbjct: 33 LLCALVCVAGLAAVARCAWLRRLTGVNPAAVGEAPPPNKGLKKKALQALPKSTYTASAST 92
Query: 60 VVYS-----AGIKLTGAEAECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCP 114
+ + + + EC IC++EF EG+ I++L C H FH CI KWL S SCP
Sbjct: 93 AAAADDLPCSSVGDGDSSTECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCP 152
Query: 115 ICR 117
CR
Sbjct: 153 SCR 155
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 52 EAAAAHTLVVYSAGIKLTGAEAECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHY 111
++ A +L VY +CVICLS+F EG+ ++V+ C H FH C+ WL S+
Sbjct: 117 DSQAVRSLPVYRYTKAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYV 176
Query: 112 SCPICRCNCLFS 123
+CP+CR N LFS
Sbjct: 177 TCPLCRSNQLFS 188
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 74 ECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICRCNCLF 122
+C +CL EF +G+ +++L RC H FH QCI WL SH +CP+CR N F
Sbjct: 156 DCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANITF 204
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 66.6 bits (161), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 37 QNQHQQQRNNNKPSAEAAAAHTLVV--YSAGIKLTGAEAECVICLSEFVEGDVIQVLERC 94
Q Q QQ N + + + TL V Y + + L + +C +CL EF D +++L +C
Sbjct: 86 QGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKC 145
Query: 95 KHGFHSQCIQKWLYSHYSCPICRCNCL 121
H FH +CI WL SH +CP+CR N L
Sbjct: 146 SHAFHVECIDTWLLSHSTCPLCRSNLL 172
>sp|P0C035|ATL60_ARATH RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2
SV=1
Length = 310
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 31/44 (70%)
Query: 74 ECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICR 117
EC +CLS+ V+GD +VL RC HGFH CI W SH +CP+CR
Sbjct: 119 ECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCR 162
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 67 KLTGAEAECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICRCNC 120
KL E EC ICL+EF + + +++L +C H FH CI WL +H +CP+CR N
Sbjct: 120 KLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANL 173
>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
SV=1
Length = 324
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 74 ECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICRCNCLFSP 124
EC ICLSE V+GD ++L +C H FH +CI W SH +CPICR N + P
Sbjct: 126 ECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICR-NTVLGP 175
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 74 ECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICRCNCLFSP-TSTPTSPQ 132
+C +CL EF EGD ++ L C H FH +CI +WL SH +CP+CR L S TP SP
Sbjct: 155 DCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPF 214
Query: 133 QP 134
P
Sbjct: 215 VP 216
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 52 EAAAAHTLVVYS--AGIKLTGAEAECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYS 109
E + + +YS G+K+ EC ICLSEFV+ + ++ + C H FH+ CI WL S
Sbjct: 98 ELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCIDVWLSS 157
Query: 110 HYSCPICRCNCLFSP 124
+CP CR N P
Sbjct: 158 QSTCPACRANLSLKP 172
>sp|Q9LRB7|EL5_ORYSJ E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica
GN=EL5.1 PE=1 SV=1
Length = 325
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 74 ECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICR 117
EC +CL+E +G+ + L RC HGFH++C+ WL SH +CP+CR
Sbjct: 133 ECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCR 176
>sp|Q9LZV8|ATL74_ARATH RING-H2 finger protein ATL74 OS=Arabidopsis thaliana GN=ATL74 PE=2
SV=1
Length = 159
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
Query: 12 NTAIRCFLRDNNNYDQQRRTPSPSPQNQHQQQRNNNKPSAEAAAAHTLVVYSAG-IKLTG 70
N+ +RC +R + + + +++ P AE Y +G +K+
Sbjct: 52 NSILRCAMRCGFGLSSSAAAGTVADRAGLKKRELKKFPVAE---------YGSGEVKI-- 100
Query: 71 AEAECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICR 117
A EC ICL EF +G+ ++VL C H FH CI WL SH SCP CR
Sbjct: 101 AATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCR 147
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 65 GIKLTGAEAECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICRCNCLFSP 124
G K+ G + C ICL EF E + +++L +C H FH CI +WL SH +CP+CR +
Sbjct: 147 GFKINGTD--CSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKIIVPT 204
Query: 125 TSTP 128
T P
Sbjct: 205 TQQP 208
>sp|Q940Q4|ATL13_ARATH RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2
SV=2
Length = 472
Score = 62.4 bits (150), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 37 QNQHQQQRNNNKPSAEAAAAHTLVV--YSAGIKLTGAEAECVICLSEFVEGDVIQVLERC 94
Q Q QQ + + + + TL V Y + I L +C +CL EF D +++L +C
Sbjct: 94 QGQLQQLFHLHDSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKC 153
Query: 95 KHGFHSQCIQKWLYSHYSCPICR 117
H FH CI WL SH +CP+CR
Sbjct: 154 SHAFHMDCIDTWLLSHSTCPLCR 176
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 34 PSPQNQHQQQRNNNKPSAEAAAAHTLV------VYSA--GIKLTGAEAECVICLSEFVEG 85
P ++ + R N+ S + +V YS+ K+ + EC ICL+E +
Sbjct: 75 PDSSTRYFRNRANDGSSRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDH 134
Query: 86 DVIQVLERCKHGFHSQCIQKWLYSHYSCPICRCN 119
+ +++L C H FH CI WLYSH +CP+CR N
Sbjct: 135 ETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSN 168
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 42 QQRNNNKPSAEAAAAHTLVVYSAGI-------KLTGAEAECVICLSEFVEGDVIQVLERC 94
++R N A A T+ + + K+ EC ICL+EF + + +++L +C
Sbjct: 84 RRRVTNATVARGLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKC 143
Query: 95 KHGFHSQCIQKWLYSHYSCPICRCN 119
H FH CI WL H +CP+CR N
Sbjct: 144 DHVFHPHCIGAWLQGHVTCPVCRTN 168
>sp|Q9FHG8|ATL50_ARATH Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana
GN=ATL50 PE=3 SV=1
Length = 210
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 20 RDNNNYDQQRRTPSPSPQNQHQQQRNNNKPSAEAA--AAHTLVVYSAGIKLTGAEAECVI 77
R ++ YD + S + Q ++Q + N + + + A L+ Y I L ++C +
Sbjct: 66 RLDDAYDGITES-STALQGRYQTRFNLHDAEIDQSFIDALPLLHYKTMIGLRHDLSDCAV 124
Query: 78 CLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICRCN 119
CL EF D +++L +C H FH +CI WL ++ +CP+CR N
Sbjct: 125 CLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTCPLCRDN 166
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 53 AAAAHTLVVYSAGIKLTGAEAECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYS 112
A + T+V + G + EC +CL+EF E + +++L +C H FH CI WL SH +
Sbjct: 114 AINSITVVGFKKGEGIIDG-TECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKN 172
Query: 113 CPICRCNCLF 122
CP+CR L
Sbjct: 173 CPLCRAPVLL 182
>sp|Q6NKR1|ATL28_ARATH RING-H2 finger protein ATL28 OS=Arabidopsis thaliana GN=ATL28 PE=2
SV=1
Length = 254
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 73 AECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICRC 118
EC ICLSEF + D ++++ C+H FHS CI W H +CP+CRC
Sbjct: 101 TECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFELHKTCPVCRC 146
>sp|Q9FG21|ATL71_ARATH Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana
GN=ATL71 PE=3 SV=1
Length = 197
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 75 CVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICRCNCLFSPTSTPTSPQQP 134
C ICL+++ + D+I+VL C H FH C+ WL H +CP+CR + L SP TP + P
Sbjct: 129 CSICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVP 188
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 65 GIKLTGAEAECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICRCNCLFSP 124
G+K+ EC ICLSEF + + ++ + C H FH+ CI WL S +CP+CR N P
Sbjct: 113 GLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCRANLSLKP 172
>sp|Q9LQM2|ATL81_ARATH RING-H2 finger protein ATL81 OS=Arabidopsis thaliana GN=ATL81 PE=2
SV=1
Length = 332
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 16 RCFLRDNNNYDQQRRTPSPSPQNQHQQQRNNNKPSAEAAAAHTLVVYSAGIKLTGAEAEC 75
R +R NN+ + R P N Q ++ + Y +K G + +C
Sbjct: 101 RKLMRIWNNHRNRNR-----PSNLIQPSNPPENLGLDSKIIESFPEYPYSVKDHGTD-QC 154
Query: 76 VICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICR 117
ICL+EF++ D I+++ C H FH+ CI W H +CP+CR
Sbjct: 155 SICLTEFMDDDTIRLISTCNHSFHTICIDLWFEGHKTCPVCR 196
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 32/44 (72%)
Query: 74 ECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICR 117
EC +CL+ F +V+++L +CKH FH +C+ WL +H +CP+CR
Sbjct: 145 ECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCR 188
>sp|Q9M313|ATL68_ARATH RING-H2 finger protein ATL68 OS=Arabidopsis thaliana GN=ATL68 PE=2
SV=1
Length = 212
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 46 NNKPSAEAAAAHTLVVYSAGI-KLTGAEAECVICLSEFVEGDVIQVLERCKHGFHSQCIQ 104
N+ P T VV G G E C ICL E++E ++++++ CKH FH C+
Sbjct: 106 NSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYMEEEMLRMMPECKHYFHVYCLD 165
Query: 105 KWLYSHYSCPICRCNCLFSPTSTPTS 130
WL + SCP+CR + L +P STP S
Sbjct: 166 AWLKLNGSCPVCRNSPLPTPQSTPQS 191
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 70 GAEA-ECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICRCNCLFSPTSTP 128
G EA EC +CL+EF + + ++++ +C H FH CI WL SH +CP+CR + + P +
Sbjct: 138 GKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCRADLIPVPGESI 197
Query: 129 TSPQQP 134
S Q P
Sbjct: 198 VSIQIP 203
>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
SV=2
Length = 413
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 74 ECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICRCNCLFSPTSTP 128
+C +CL+EF E + +++L +C H FH CI WL SH +CP+CR +TP
Sbjct: 176 DCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAMISVTTP 230
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 65 GIKLTGAEAECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICRCNCLFSP 124
G+K+ EC ICL+EF + + ++++ C H FH+ CI WL S +CP+CR + P
Sbjct: 118 GLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASLPPKP 177
Query: 125 TS 126
S
Sbjct: 178 GS 179
>sp|Q9LUL6|ATL61_ARATH Putative RING-H2 finger protein ATL61 OS=Arabidopsis thaliana
GN=ATL61 PE=3 SV=1
Length = 204
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 31/44 (70%)
Query: 74 ECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICR 117
ECV+CLSE +GD +VL C H FH +CI WL S+ +CPICR
Sbjct: 87 ECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTCPICR 130
>sp|Q9LUZ9|ATL63_ARATH RING-H2 finger protein ATL63 OS=Arabidopsis thaliana GN=ATL63 PE=2
SV=1
Length = 308
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%)
Query: 44 RNNNKPSAEAAAAHTLVVYSAGIKLTGAEAECVICLSEFVEGDVIQVLERCKHGFHSQCI 103
R++ + ++ L VY + E ECVICL + GD + L C HGFH +CI
Sbjct: 107 RDDKGLDSSVISSIPLFVYEENEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECI 166
Query: 104 QKWLYSHYSCPICRCNCL 121
WL SH +CP+CR L
Sbjct: 167 DMWLSSHSTCPLCRSPVL 184
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 74 ECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICR 117
EC +CLSEF E + +VL C+H FH CI W +SH +CP+CR
Sbjct: 118 ECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCR 161
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 74 ECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICRCNCLFSPTS 126
EC +CL+EF + D ++VL C H FH CI WL + +CP+CR N P S
Sbjct: 132 ECAVCLAEFADSDELRVLPACCHVFHPDCIDPWLAAAVTCPLCRANLTAPPVS 184
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 31 TPSPSPQNQHQQQRNNNKPSAEAAAAHTLVVY-SAGIKLTGAEAECVICLSEFVEGDVIQ 89
+ S + Q Q QQ + + + A L V+ IK T +C +CL EF E D ++
Sbjct: 99 SDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLR 158
Query: 90 VLERCKHGFHSQCIQKWLYSHYSCPICRCNCLFS 123
+L C H FH CI WL S+ +CP+CR LFS
Sbjct: 159 LLPNCSHAFHIDCIDTWLLSNSTCPLCR-GTLFS 191
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 59.3 bits (142), Expect = 7e-09, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 74 ECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICR 117
+C +CLS+F +++++L +C+H FH CI +WL H +CP+CR
Sbjct: 122 DCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCR 165
>sp|Q9P7E1|YOF7_SCHPO Uncharacterized RING finger protein P4H10.07 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBP4H10.07 PE=1 SV=1
Length = 583
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 68 LTGAEAECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLY-SHYSCPICRCNCLFSPTS 126
+G + C++CLS F D + L++C H FH +CI +WL S SCP+CR + S S
Sbjct: 518 FSGTDERCLVCLSNFELNDECRRLKQCNHFFHRECIDQWLTSSQNSCPLCRTKGVAS-AS 576
Query: 127 TPTSPQ 132
TP+SP+
Sbjct: 577 TPSSPK 582
>sp|Q8RXD3|AIP2_ARATH E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana GN=AIP2
PE=1 SV=1
Length = 310
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 50 SAEAAAAHTLVVYSAGI-KLTGAEAECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLY 108
S E +++++ + K GAEAEC IC V GD +Q L CKH FH C++ WL
Sbjct: 204 SKEVVEKLPVIIFTEELLKKFGAEAECCICKENLVIGDKMQELP-CKHTFHPPCLKPWLD 262
Query: 109 SHYSCPICR 117
H SCPICR
Sbjct: 263 EHNSCPICR 271
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 58 TLVVYSAGIKLTGAEAECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICR 117
T+ Y +G ++C +CLSEF E + +++L +C H FH CI WL SH +CP+CR
Sbjct: 126 TVYKYKSGDGFVDG-SDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCR 184
Query: 118 C 118
Sbjct: 185 A 185
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 74 ECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICR 117
EC +CLSEF + + +V+ CKH FH CI W +SH SCP+CR
Sbjct: 75 ECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFHSHSSCPLCR 118
>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
SV=1
Length = 217
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%)
Query: 48 KPSAEAAAAHTLVVYSAGIKLTGAEAECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWL 107
K ++ +L + GIK A EC +CLS E D ++L CKH FH C+ WL
Sbjct: 73 KRGLDSLVIASLPTFVVGIKNDVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWL 132
Query: 108 YSHYSCPICR 117
+ +CP+CR
Sbjct: 133 TTQSTCPVCR 142
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 73 AECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICR 117
++C +CLSEF E + +++L +C H FH CI WL SH +CP+CR
Sbjct: 157 SDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCR 201
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 74 ECVICLSEFVEGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICRCNCLFSPTSTPTSP 131
+C +CL EF E D +++L C H FH CI WL S+ +CP+CR LFSP + +P
Sbjct: 142 DCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCR-GTLFSPGFSMENP 198
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.131 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,275,441
Number of Sequences: 539616
Number of extensions: 1995000
Number of successful extensions: 11276
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 366
Number of HSP's successfully gapped in prelim test: 215
Number of HSP's that attempted gapping in prelim test: 10654
Number of HSP's gapped (non-prelim): 695
length of query: 135
length of database: 191,569,459
effective HSP length: 100
effective length of query: 35
effective length of database: 137,607,859
effective search space: 4816275065
effective search space used: 4816275065
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)