BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047783
(90 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P31166|APT1_ARATH Adenine phosphoribosyltransferase 1, chloroplastic OS=Arabidopsis
thaliana GN=APT1 PE=1 SV=2
Length = 243
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 34/38 (89%)
Query: 48 VRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGK 85
+ + G++ARGFIFGPPIA AIGAKFVPMRKPKKLPGK
Sbjct: 120 ISVVAGVEARGFIFGPPIALAIGAKFVPMRKPKKLPGK 157
>sp|Q43199|APT1_WHEAT Adenine phosphoribosyltransferase 1 OS=Triticum aestivum GN=APT1
PE=2 SV=1
Length = 181
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 41/57 (71%), Gaps = 4/57 (7%)
Query: 35 SFRH--KLFSE--PSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKSL 87
+FR LF E + + G++ARGFIFGPPIA AIGAKFVP+RKPKKLPG+ +
Sbjct: 39 AFRDTTDLFVERYKDKDITVVAGVEARGFIFGPPIALAIGAKFVPIRKPKKLPGEVI 95
>sp|Q42563|APT2_ARATH Adenine phosphoribosyltransferase 2 OS=Arabidopsis thaliana GN=APT2
PE=2 SV=1
Length = 192
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 8/73 (10%)
Query: 16 VQTIILNWTPISHRFSVSLS-FRHKLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGAKFV 74
+ T++L+ H + + ++H ++ + G++ARGFIFGPPIA AIGAKFV
Sbjct: 37 ITTLLLDPVAFKHVVDIFVDRYKHM-------NISLVAGVEARGFIFGPPIALAIGAKFV 89
Query: 75 PMRKPKKLPGKSL 87
P+RKP KLPG+ +
Sbjct: 90 PLRKPGKLPGRVI 102
>sp|B2TMZ9|APT_CLOBB Adenine phosphoribosyltransferase OS=Clostridium botulinum
(strain Eklund 17B / Type B) GN=apt PE=3 SV=1
Length = 172
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 35/45 (77%)
Query: 45 SPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKSLHL 89
+V + G +ARGFIFG P+A+A+GA FVP+RKP KLPG+++ +
Sbjct: 46 DKNVDLIVGPEARGFIFGVPVAYALGAGFVPVRKPGKLPGETISV 90
>sp|Q6CA53|APT_YARLI Adenine phosphoribosyltransferase OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=APT1 PE=3 SV=1
Length = 182
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 30/36 (83%)
Query: 53 GIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKSLH 88
G+ ARGF+FGP +A AIGA FVP+RK KLPGK++H
Sbjct: 65 GLDARGFLFGPTLALAIGAAFVPVRKQGKLPGKTVH 100
>sp|B2V345|APT_CLOBA Adenine phosphoribosyltransferase OS=Clostridium botulinum
(strain Alaska E43 / Type E3) GN=apt PE=3 SV=1
Length = 172
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 45 SPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKSLHL 89
+ + G +ARGFIFG P+A+A+GA FVP+RKP KLPG+++ +
Sbjct: 46 DKEIDLIVGPEARGFIFGVPVAYALGAGFVPVRKPGKLPGETISV 90
>sp|Q756E2|APT_ASHGO Adenine phosphoribosyltransferase OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=APT1
PE=3 SV=1
Length = 187
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 32/42 (76%)
Query: 44 PSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGK 85
P + +L G+++RGF+FGP +A AIGA FVP+RK KLPG+
Sbjct: 56 PETKIDYLVGLESRGFLFGPSLALAIGAGFVPVRKAGKLPGQ 97
>sp|Q01QQ9|APT_SOLUE Adenine phosphoribosyltransferase OS=Solibacter usitatus (strain
Ellin6076) GN=apt PE=3 SV=1
Length = 173
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 33/42 (78%)
Query: 48 VRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKSLHL 89
V + GI+ARGFIF P +A+A+GA FVP+RKPKKLP + + +
Sbjct: 50 VDTVLGIEARGFIFAPALAYALGAGFVPVRKPKKLPAECVRI 91
>sp|Q1IKJ1|APT_KORVE Adenine phosphoribosyltransferase OS=Koribacter versatilis
(strain Ellin345) GN=apt PE=3 SV=1
Length = 182
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 35/43 (81%)
Query: 45 SPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKSL 87
+ ++ + G++ARGFIFGP +A+ + A F+P+RKP+KLPG+++
Sbjct: 56 NKNIDLVVGMEARGFIFGPAVAYRLNAGFIPIRKPRKLPGETV 98
>sp|B0CBF7|APT_ACAM1 Adenine phosphoribosyltransferase OS=Acaryochloris marina (strain
MBIC 11017) GN=apt PE=3 SV=1
Length = 170
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 SVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLP 83
S+ ++ GI++RGFIFG P+A+ +GA FVP+RKP KLP
Sbjct: 48 SIDYVVGIESRGFIFGAPLAYQLGAGFVPVRKPGKLP 84
>sp|A1SX04|APT_PSYIN Adenine phosphoribosyltransferase OS=Psychromonas ingrahamii
(strain 37) GN=apt PE=3 SV=1
Length = 181
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 29/36 (80%)
Query: 53 GIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKSLH 88
G +ARGFIFG P+A AIGA FVP+RKP KLP ++H
Sbjct: 60 GTEARGFIFGAPLAAAIGAGFVPVRKPGKLPRTTVH 95
>sp|A6LTN5|APT_CLOB8 Adenine phosphoribosyltransferase OS=Clostridium beijerinckii
(strain ATCC 51743 / NCIMB 8052) GN=apt PE=3 SV=1
Length = 172
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 33/42 (78%)
Query: 48 VRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKSLHL 89
+ + G +ARGFIFG P+A+A+G F+P+RKP KLPG+++ +
Sbjct: 49 IDLIVGPEARGFIFGVPVAYALGVGFIPVRKPGKLPGETISV 90
>sp|C1F3T2|APT_ACIC5 Adenine phosphoribosyltransferase OS=Acidobacterium capsulatum
(strain ATCC 51196 / DSM 11244 / JCM 7670) GN=apt PE=3
SV=1
Length = 181
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 34/43 (79%)
Query: 47 SVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKSLHL 89
++ + GI+ARGFIFGP +A+ + A FVP+RKP+KLP +++ +
Sbjct: 57 NIDLVLGIEARGFIFGPALAYRLNAGFVPVRKPRKLPARTVRV 99
>sp|Q6A8K3|APT_PROAC Adenine phosphoribosyltransferase OS=Propionibacterium acnes
(strain KPA171202 / DSM 16379) GN=apt PE=3 SV=1
Length = 177
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 39 KLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGK 85
+L S V + G++ARGF+F P+A ++GA FVP+RKP KLPG
Sbjct: 44 ELVDTASRDVDVVLGMEARGFMFAGPVALSLGAGFVPVRKPGKLPGD 90
>sp|Q0SRP2|APT_CLOPS Adenine phosphoribosyltransferase OS=Clostridium perfringens
(strain SM101 / Type A) GN=apt PE=3 SV=1
Length = 172
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 45 SPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKSLHL 89
++ + G +ARGFIFG P+A+A+G F+P+RKP KLPG ++ +
Sbjct: 46 DKNIDVVVGPEARGFIFGVPVAYALGVGFIPVRKPGKLPGDTVRV 90
>sp|Q8XJ22|APT_CLOPE Adenine phosphoribosyltransferase OS=Clostridium perfringens
(strain 13 / Type A) GN=apt PE=3 SV=1
Length = 172
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 45 SPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKSLHL 89
++ + G +ARGFIFG P+A+A+G F+P+RKP KLPG ++ +
Sbjct: 46 DKNIDVVVGPEARGFIFGVPVAYALGVGFIPVRKPGKLPGDTVRV 90
>sp|Q0TP22|APT_CLOP1 Adenine phosphoribosyltransferase OS=Clostridium perfringens
(strain ATCC 13124 / NCTC 8237 / Type A) GN=apt PE=3
SV=1
Length = 172
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 45 SPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKSLHL 89
++ + G +ARGFIFG P+A+A+G F+P+RKP KLPG ++ +
Sbjct: 46 DKNIDVVVGPEARGFIFGVPVAYALGVGFIPVRKPGKLPGDTVRV 90
>sp|O25296|APT_HELPY Adenine phosphoribosyltransferase OS=Helicobacter pylori (strain
ATCC 700392 / 26695) GN=apt PE=3 SV=1
Length = 179
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 18 TIILNWTPISHRFSVSLSFRHKLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMR 77
T +LN+ + ++ +L R+ + ++ F+ GI+ARGFI G +A+A+G FVP+R
Sbjct: 30 TTLLNYPKLFNKLIDTLKKRY-----LALNIDFIVGIEARGFILGSALAYALGVGFVPVR 84
Query: 78 KPKKLPGKSL 87
K KLP +L
Sbjct: 85 KKGKLPAHTL 94
>sp|Q17W08|APT_HELAH Adenine phosphoribosyltransferase OS=Helicobacter acinonychis
(strain Sheeba) GN=apt PE=3 SV=1
Length = 179
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 7/71 (9%)
Query: 18 TIILNWTPISHRFSVSLSFRHKLFSEPSP-SVRFLQGIKARGFIFGPPIAWAIGAKFVPM 76
T +LN+ + ++ +L R+ +P +V F+ GI+ARGFI G +A+A+G FVP+
Sbjct: 30 TTLLNYPKLFNKLIDALKKRY------TPLNVDFIVGIEARGFILGSALAYALGVGFVPV 83
Query: 77 RKPKKLPGKSL 87
RK KLP +L
Sbjct: 84 RKKGKLPAHTL 94
>sp|B5Z6U3|APT_HELPG Adenine phosphoribosyltransferase OS=Helicobacter pylori (strain
G27) GN=apt PE=3 SV=1
Length = 179
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 18 TIILNWTPISHRFSVSLSFRHKLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMR 77
T +LN+ + ++ +L R+ + ++ F+ GI+ARGFI G +A+A+G FVP+R
Sbjct: 30 TTLLNYPKLFNKLIDALKKRY-----LALNIDFIVGIEARGFILGSALAYALGVGFVPVR 84
Query: 78 KPKKLPGKSL 87
K KLP +L
Sbjct: 85 KKGKLPAHTL 94
>sp|B2UTQ6|APT_HELPS Adenine phosphoribosyltransferase OS=Helicobacter pylori (strain
Shi470) GN=apt PE=3 SV=1
Length = 179
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 18 TIILNWTPISHRFSVSLSFRHKLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMR 77
T +LN+ + ++ +L R+ + ++ F+ GI+ARGFI G +A+A+G FVP+R
Sbjct: 30 TTLLNYPKLFNKLIDALKKRY-----LALNIDFIVGIEARGFILGSALAYALGVGFVPVR 84
Query: 78 KPKKLPGKSL 87
K KLP +L
Sbjct: 85 KKGKLPAHTL 94
>sp|Q1CTV4|APT_HELPH Adenine phosphoribosyltransferase OS=Helicobacter pylori (strain
HPAG1) GN=apt PE=3 SV=1
Length = 179
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 18 TIILNWTPISHRFSVSLSFRHKLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMR 77
T +LN+ + ++ +L R+ + ++ F+ GI+ARGFI G +A+A+G FVP+R
Sbjct: 30 TTLLNYPKLFNKLIDALKKRY-----LALNIDFIVGIEARGFILGSALAYALGVGFVPVR 84
Query: 78 KPKKLPGKSL 87
K KLP +L
Sbjct: 85 KKGKLPAHTL 94
>sp|B6JLF4|APT_HELP2 Adenine phosphoribosyltransferase OS=Helicobacter pylori (strain
P12) GN=apt PE=3 SV=1
Length = 179
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 18 TIILNWTPISHRFSVSLSFRHKLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMR 77
T +LN+ + ++ +L R+ + ++ F+ GI+ARGFI G +A+A+G FVP+R
Sbjct: 30 TTLLNYPKLFNKLIDALKKRY-----LALNIDFIVGIEARGFILGSALAYALGVGFVPVR 84
Query: 78 KPKKLPGKSL 87
K KLP +L
Sbjct: 85 KKGKLPAHTL 94
>sp|Q8YNI3|APT_NOSS1 Adenine phosphoribosyltransferase OS=Nostoc sp. (strain PCC 7120
/ UTEX 2576) GN=apt PE=3 SV=1
Length = 172
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 37/51 (72%)
Query: 33 SLSFRHKLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLP 83
++ F + SE + ++ ++ G+++RGFIFG P+A+ +GA F+P+RK KLP
Sbjct: 36 TIDFLAEKCSEANLNIDYVIGMESRGFIFGTPLAYKLGAGFIPVRKKGKLP 86
>sp|B1JHN6|APT_YERPY Adenine phosphoribosyltransferase OS=Yersinia pseudotuberculosis
serotype O:3 (strain YPIII) GN=apt PE=3 SV=1
Length = 187
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 30 FSVSLSFRHKLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKSL 87
+S S+ + +SE V + G +ARGF+FG P+A A+G FVP+RKP KLP +++
Sbjct: 45 YSASIELLSEHYSESG--VTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETI 100
>sp|B2K6Z1|APT_YERPB Adenine phosphoribosyltransferase OS=Yersinia pseudotuberculosis
serotype IB (strain PB1/+) GN=apt PE=3 SV=1
Length = 187
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 30 FSVSLSFRHKLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKSL 87
+S S+ + +SE V + G +ARGF+FG P+A A+G FVP+RKP KLP +++
Sbjct: 45 YSASIELLSEHYSESG--VTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETI 100
>sp|A7FL92|APT_YERP3 Adenine phosphoribosyltransferase OS=Yersinia pseudotuberculosis
serotype O:1b (strain IP 31758) GN=apt PE=3 SV=1
Length = 187
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 30 FSVSLSFRHKLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKSL 87
+S S+ + +SE V + G +ARGF+FG P+A A+G FVP+RKP KLP +++
Sbjct: 45 YSASIELLSEHYSESG--VTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETI 100
>sp|Q66DQ2|APT_YERPS Adenine phosphoribosyltransferase OS=Yersinia pseudotuberculosis
serotype I (strain IP32953) GN=apt PE=3 SV=1
Length = 187
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 30 FSVSLSFRHKLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKSL 87
+S S+ + +SE V + G +ARGF+FG P+A A+G FVP+RKP KLP +++
Sbjct: 45 YSASIELLSEHYSESG--VTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETI 100
>sp|A6TQN8|APT_ALKMQ Adenine phosphoribosyltransferase OS=Alkaliphilus metalliredigens
(strain QYMF) GN=apt PE=3 SV=1
Length = 170
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%)
Query: 47 SVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKSL 87
+ + G +ARGF+ G P+A+ IGA FVP+RKP KLPG+++
Sbjct: 48 DIDIVVGPEARGFLVGAPVAYKIGAGFVPIRKPGKLPGETI 88
>sp|A4TPB0|APT_YERPP Adenine phosphoribosyltransferase OS=Yersinia pestis (strain
Pestoides F) GN=apt PE=3 SV=1
Length = 187
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 30 FSVSLSFRHKLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKSL 87
+S S+ + +SE V + G +ARGF+FG P+A A+G FVP+RKP KLP +++
Sbjct: 45 YSASIKLLSEHYSESG--VTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETI 100
>sp|Q1CL33|APT_YERPN Adenine phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua
(strain Nepal516) GN=apt PE=3 SV=1
Length = 187
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 30 FSVSLSFRHKLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKSL 87
+S S+ + +SE V + G +ARGF+FG P+A A+G FVP+RKP KLP +++
Sbjct: 45 YSASIKLLSEHYSESG--VTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETI 100
>sp|A9R0Q1|APT_YERPG Adenine phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua
(strain Angola) GN=apt PE=3 SV=1
Length = 187
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 30 FSVSLSFRHKLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKSL 87
+S S+ + +SE V + G +ARGF+FG P+A A+G FVP+RKP KLP +++
Sbjct: 45 YSASIKLLSEHYSESG--VTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETI 100
>sp|Q8ZC94|APT_YERPE Adenine phosphoribosyltransferase OS=Yersinia pestis GN=apt PE=3
SV=1
Length = 187
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 30 FSVSLSFRHKLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKSL 87
+S S+ + +SE V + G +ARGF+FG P+A A+G FVP+RKP KLP +++
Sbjct: 45 YSASIKLLSEHYSESG--VTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETI 100
>sp|Q1C4P3|APT_YERPA Adenine phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua
(strain Antiqua) GN=apt PE=3 SV=1
Length = 187
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 30 FSVSLSFRHKLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKSL 87
+S S+ + +SE V + G +ARGF+FG P+A A+G FVP+RKP KLP +++
Sbjct: 45 YSASIKLLSEHYSESG--VTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETI 100
>sp|Q9ZLQ9|APT_HELPJ Adenine phosphoribosyltransferase OS=Helicobacter pylori (strain
J99) GN=apt PE=3 SV=1
Length = 179
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 18 TIILNWTPISHRFSVSLSFRHKLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMR 77
T +LN+ + ++ +L R+ + ++ F+ GI+ARGFI G A+A+G FVP+R
Sbjct: 30 TTLLNYPKLFNKLIDALKKRY-----LALNIDFIVGIEARGFILGSAFAYALGVGFVPVR 84
Query: 78 KPKKLPGKSL 87
K KLP +L
Sbjct: 85 KKGKLPAHTL 94
>sp|P49435|APT1_YEAST Adenine phosphoribosyltransferase 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=APT1 PE=1 SV=3
Length = 187
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 31/43 (72%)
Query: 44 PSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKS 86
P + ++ G+++RGF+FGP +A A+G FVP+RK KLPG+
Sbjct: 56 PEVKIDYIVGLESRGFLFGPTLALALGVGFVPVRKAGKLPGEC 98
>sp|Q183I0|APT_CLOD6 Adenine phosphoribosyltransferase OS=Clostridium difficile
(strain 630) GN=apt PE=3 SV=1
Length = 170
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 21 LNWTPISHRFSVSLSFRHKLFS----EPSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPM 76
+++ ++ F +F++ + S V + G +ARGF+ G P+A+A+G FVP+
Sbjct: 18 IDFKDVTTLFKDGDAFKYAVDSIVEELKDKDVDLVIGPEARGFLMGTPVAYALGVGFVPI 77
Query: 77 RKPKKLPGK 85
RKP KLPG+
Sbjct: 78 RKPGKLPGE 86
>sp|Q24UQ1|APT_DESHY Adenine phosphoribosyltransferase OS=Desulfitobacterium hafniense
(strain Y51) GN=apt PE=3 SV=1
Length = 173
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 27 SHRFSVSLSFRHKLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKS 86
++R +V S+P + G +ARGF+ G P+A+A+G FVP+RKP KLPGK+
Sbjct: 35 AYRAAVDAIVERVRESQPD----LIVGPEARGFLLGAPVAYALGIGFVPVRKPGKLPGKT 90
Query: 87 L 87
+
Sbjct: 91 V 91
>sp|B8FQU0|APT_DESHD Adenine phosphoribosyltransferase OS=Desulfitobacterium hafniense
(strain DCB-2 / DSM 10664) GN=apt PE=3 SV=1
Length = 170
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 27 SHRFSVSLSFRHKLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKS 86
++R +V S+P + G +ARGF+ G P+A+A+G FVP+RKP KLPGK+
Sbjct: 32 AYRAAVDAIVERVRESQPD----LIVGPEARGFLLGAPVAYALGIGFVPVRKPGKLPGKT 87
Query: 87 L 87
+
Sbjct: 88 V 88
>sp|Q6BZF9|APT_DEBHA Adenine phosphoribosyltransferase OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=APT1 PE=3 SV=1
Length = 186
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 30/37 (81%)
Query: 48 VRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPG 84
V ++ G+++RGF+FGP +A A+GA FVP+RK KLPG
Sbjct: 59 VDYVVGLESRGFLFGPTLALALGAGFVPVRKAGKLPG 95
>sp|A0PZW4|APT_CLONN Adenine phosphoribosyltransferase OS=Clostridium novyi (strain
NT) GN=apt PE=3 SV=1
Length = 172
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 18 TIILNWTPISHRFSVSLSFRHKLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMR 77
T +LN + +++V H +V + G +ARGF+FG P+A+A+GA FVP+R
Sbjct: 24 TTVLNDKE-ALKYTVDAIVEHL----KDKNVDVVVGPEARGFLFGTPVAYALGAAFVPVR 78
Query: 78 KPKKLPGKSL 87
K KLP +++
Sbjct: 79 KKGKLPCETI 88
>sp|Q7VGF2|APT_HELHP Adenine phosphoribosyltransferase OS=Helicobacter hepaticus
(strain ATCC 51449 / 3B1) GN=apt PE=3 SV=1
Length = 178
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 44 PSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLP 83
+ S+ F+ I+ARGFIFG +A+A+G FVP+RK KLP
Sbjct: 47 ENQSIDFIAAIEARGFIFGSALAYALGIGFVPIRKKGKLP 86
>sp|B4S410|APT_PROA2 Adenine phosphoribosyltransferase OS=Prosthecochloris aestuarii
(strain DSM 271 / SK 413) GN=apt PE=3 SV=1
Length = 177
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 25 PISHRFSVSLSFRHKLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPG 84
P+ R + +H L E + + G++ARGFI G +++ +G FVP+RKP KLPG
Sbjct: 30 PVGFRLVIDQITQHYL--ENGINFDMIIGMEARGFIIGGALSYTLGKGFVPIRKPGKLPG 87
Query: 85 KSLH 88
++++
Sbjct: 88 ETVN 91
>sp|A0KKD3|APT_AERHH Adenine phosphoribosyltransferase OS=Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240) GN=apt PE=3
SV=2
Length = 181
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 53 GIKARGFIFGPPIAWAIGAKFVPMRKPKKLP 83
G +ARGFIFG P+A+A+G FVP+RKP KLP
Sbjct: 60 GTEARGFIFGAPVAYAMGLGFVPVRKPGKLP 90
>sp|A6T5N2|APT_KLEP7 Adenine phosphoribosyltransferase OS=Klebsiella pneumoniae subsp.
pneumoniae (strain ATCC 700721 / MGH 78578) GN=apt PE=3
SV=1
Length = 183
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 29/35 (82%)
Query: 53 GIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKSL 87
G +ARGF+FG P+A A+G FVP+RKP+KLP +++
Sbjct: 62 GTEARGFLFGAPVALALGVGFVPVRKPRKLPRETI 96
>sp|B5Y0N8|APT_KLEP3 Adenine phosphoribosyltransferase OS=Klebsiella pneumoniae
(strain 342) GN=apt PE=3 SV=1
Length = 183
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 29/35 (82%)
Query: 53 GIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKSL 87
G +ARGF+FG P+A A+G FVP+RKP+KLP +++
Sbjct: 62 GTEARGFLFGAPVALALGVGFVPVRKPRKLPRETI 96
>sp|Q0AJC5|APT_NITEC Adenine phosphoribosyltransferase OS=Nitrosomonas eutropha
(strain C91) GN=apt PE=3 SV=1
Length = 174
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 29/35 (82%)
Query: 53 GIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKSL 87
GI++RGFIF P+A+A+GA FVP+RK KLP +++
Sbjct: 54 GIESRGFIFAAPVAYALGAGFVPIRKQGKLPAETI 88
>sp|Q6D800|APT_ERWCT Adenine phosphoribosyltransferase OS=Erwinia carotovora subsp.
atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=apt
PE=3 SV=1
Length = 185
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 39/60 (65%), Gaps = 6/60 (10%)
Query: 25 PISHRFSVS-LSFRHKLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLP 83
P+++ S+ L+ R++ + V + G +ARGF+FG P+A A+G FVP+RKP KLP
Sbjct: 40 PVAYAASIDMLANRYR-----NTGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLP 94
>sp|A7MJV7|APT_CROS8 Adenine phosphoribosyltransferase OS=Cronobacter sakazakii
(strain ATCC BAA-894) GN=apt PE=3 SV=1
Length = 183
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 29/35 (82%)
Query: 53 GIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKSL 87
G +ARGF+FG P+A A+G FVP+RKP+KLP +++
Sbjct: 62 GTEARGFLFGAPVALALGVGFVPVRKPRKLPRETI 96
>sp|A8GAU8|APT_SERP5 Adenine phosphoribosyltransferase OS=Serratia proteamaculans
(strain 568) GN=apt PE=3 SV=1
Length = 198
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 30 FSVSLSFRHKLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGKSL 87
++ S+ + F E V + G +ARGF+FG P+A A+G FVP+RKP KLP +L
Sbjct: 56 YAASIELLVERFREAG--VTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRATL 111
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,137,870
Number of Sequences: 539616
Number of extensions: 1211324
Number of successful extensions: 2829
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 614
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2214
Number of HSP's gapped (non-prelim): 615
length of query: 90
length of database: 191,569,459
effective HSP length: 60
effective length of query: 30
effective length of database: 159,192,499
effective search space: 4775774970
effective search space used: 4775774970
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)