Query 047790
Match_columns 885
No_of_seqs 812 out of 5637
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 04:57:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047790.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047790hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.3E-85 4.3E-90 799.8 37.0 620 19-643 5-752 (768)
2 3rgz_A Protein brassinosteroid 100.0 1.1E-66 3.9E-71 633.2 32.2 532 87-630 76-717 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 4E-61 1.4E-65 579.3 38.5 558 65-645 26-632 (680)
4 3t6q_A CD180 antigen; protein- 100.0 6.4E-59 2.2E-63 552.6 32.9 500 89-645 34-569 (606)
5 4eco_A Uncharacterized protein 100.0 9.6E-59 3.3E-63 550.6 21.5 487 22-584 26-601 (636)
6 3j0a_A TOLL-like receptor 5; m 100.0 1.7E-56 5.9E-61 549.4 41.1 520 70-631 10-561 (844)
7 3t6q_A CD180 antigen; protein- 100.0 5.6E-57 1.9E-61 535.9 33.3 499 65-612 34-565 (606)
8 3vq2_A TLR4, TOLL-like recepto 100.0 7E-57 2.4E-61 535.0 33.0 492 88-645 32-567 (606)
9 4ecn_A Leucine-rich repeat pro 100.0 3.5E-57 1.2E-61 544.8 29.2 480 20-546 263-864 (876)
10 1ziw_A TOLL-like receptor 3; i 100.0 5.1E-55 1.8E-59 526.1 40.8 546 69-629 9-596 (680)
11 3vq2_A TLR4, TOLL-like recepto 100.0 5.5E-55 1.9E-59 518.8 35.5 489 65-613 33-564 (606)
12 3j0a_A TOLL-like receptor 5; m 100.0 3.7E-53 1.3E-57 519.8 39.5 511 54-613 14-566 (844)
13 2z81_A CD282 antigen, TOLL-lik 100.0 7E-53 2.4E-57 494.6 27.8 488 53-631 3-511 (549)
14 2z63_A TOLL-like receptor 4, v 100.0 6.3E-51 2.1E-55 480.4 32.8 494 65-616 29-540 (570)
15 4eco_A Uncharacterized protein 100.0 2.1E-51 7.1E-56 487.7 22.7 503 24-608 25-601 (636)
16 2z63_A TOLL-like receptor 4, v 100.0 8.4E-50 2.9E-54 470.8 34.7 488 79-642 21-537 (570)
17 2z81_A CD282 antigen, TOLL-lik 100.0 3.7E-49 1.3E-53 462.9 28.7 452 92-630 9-486 (549)
18 4ecn_A Leucine-rich repeat pro 100.0 2.1E-49 7.3E-54 477.2 26.4 466 88-631 323-865 (876)
19 2z7x_B TOLL-like receptor 1, v 100.0 9.8E-50 3.4E-54 464.3 20.9 454 68-611 4-485 (520)
20 2z7x_B TOLL-like receptor 1, v 100.0 2.1E-49 7.1E-54 461.6 23.4 457 91-644 3-489 (520)
21 4g8a_A TOLL-like receptor 4; l 100.0 4.2E-48 1.4E-52 462.5 35.4 538 42-646 11-590 (635)
22 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1E-46 3.5E-51 442.6 25.7 456 67-612 34-515 (562)
23 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.3E-46 8E-51 439.6 23.5 461 89-644 32-518 (562)
24 4g8a_A TOLL-like receptor 4; l 100.0 2.2E-44 7.6E-49 430.3 32.5 493 65-611 53-584 (635)
25 1ogq_A PGIP-2, polygalacturona 100.0 1.6E-43 5.3E-48 382.6 19.6 291 22-321 2-302 (313)
26 3v47_A TOLL-like receptor 5B a 100.0 6.5E-43 2.2E-47 399.8 24.9 390 51-510 5-412 (455)
27 1jl5_A Outer protein YOPM; leu 100.0 1E-42 3.6E-47 394.8 25.7 409 82-612 5-434 (454)
28 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.2E-42 4.1E-47 367.3 19.7 201 661-865 32-237 (311)
29 4fih_A Serine/threonine-protei 100.0 3.3E-42 1.1E-46 369.6 20.6 198 661-864 74-272 (346)
30 3v47_A TOLL-like receptor 5B a 100.0 2E-41 7E-46 387.4 28.3 396 115-616 13-417 (455)
31 1jl5_A Outer protein YOPM; leu 100.0 1.2E-41 4.2E-46 386.1 25.7 391 110-631 9-430 (454)
32 4b9d_A Serine/threonine-protei 100.0 4E-42 1.4E-46 369.5 17.7 201 661-865 24-228 (350)
33 4fie_A Serine/threonine-protei 100.0 2.6E-41 8.8E-46 371.6 21.2 198 661-864 151-349 (423)
34 4g3f_A NF-kappa-beta-inducing 100.0 2.5E-41 8.6E-46 361.7 20.5 198 661-867 58-261 (336)
35 3hyh_A Carbon catabolite-derep 100.0 3.7E-41 1.3E-45 351.2 19.8 198 660-864 12-214 (275)
36 3ubd_A Ribosomal protein S6 ki 100.0 4E-42 1.4E-46 363.5 12.5 200 661-865 24-229 (304)
37 3fpq_A Serine/threonine-protei 100.0 1.7E-40 5.7E-45 349.6 22.4 195 662-864 27-231 (290)
38 4asz_A BDNF/NT-3 growth factor 100.0 2.4E-41 8.1E-46 358.9 15.4 202 661-865 13-234 (299)
39 4aoj_A High affinity nerve gro 100.0 1.5E-40 5E-45 357.8 18.7 201 661-864 41-263 (329)
40 3bz5_A Internalin-J, INLJ; leu 100.0 2.1E-39 7.3E-44 367.9 28.3 358 65-519 43-400 (457)
41 3omv_A RAF proto-oncogene seri 100.0 3.2E-40 1.1E-44 350.0 17.7 198 661-864 36-239 (307)
42 4gt4_A Tyrosine-protein kinase 100.0 6.1E-40 2.1E-44 349.6 18.9 202 661-865 26-251 (308)
43 3bz5_A Internalin-J, INLJ; leu 100.0 7.4E-39 2.5E-43 363.5 26.9 218 76-348 30-248 (457)
44 1o6v_A Internalin A; bacterial 100.0 2.5E-38 8.6E-43 362.2 29.5 190 87-323 45-234 (466)
45 1o6v_A Internalin A; bacterial 100.0 2.2E-37 7.6E-42 354.3 31.2 343 64-507 46-389 (466)
46 4g31_A Eukaryotic translation 100.0 2.9E-38 1E-42 335.8 20.1 197 661-863 5-228 (299)
47 3hmm_A TGF-beta receptor type- 100.0 1.5E-38 5E-43 340.1 17.5 199 661-863 3-219 (303)
48 2id5_A Lingo-1, leucine rich r 100.0 1.6E-37 5.6E-42 357.1 22.8 329 262-635 32-361 (477)
49 4ase_A Vascular endothelial gr 100.0 3.9E-38 1.3E-42 341.7 15.3 202 661-865 64-291 (353)
50 4b99_A Mitogen-activated prote 100.0 7.5E-38 2.5E-42 345.6 17.1 202 659-865 52-266 (398)
51 3v5w_A G-protein coupled recep 100.0 2E-37 6.9E-42 355.4 21.1 200 659-865 187-394 (689)
52 3o6n_A APL1; leucine-rich repe 100.0 1.3E-36 4.4E-41 339.9 25.4 351 43-507 2-353 (390)
53 4f9c_A Cell division cycle 7-r 100.0 2.7E-37 9.1E-42 337.6 19.2 197 661-866 21-251 (361)
54 2id5_A Lingo-1, leucine rich r 100.0 1.5E-36 5.1E-41 349.0 24.5 319 91-442 14-333 (477)
55 3oja_B Anopheles plasmodium-re 100.0 5.2E-36 1.8E-40 353.5 24.7 347 42-442 7-358 (597)
56 3uto_A Twitchin; kinase, muscl 100.0 1.2E-36 4.2E-41 352.8 17.9 201 660-865 156-359 (573)
57 1ogq_A PGIP-2, polygalacturona 100.0 4.5E-36 1.5E-40 324.1 17.3 259 334-640 51-313 (313)
58 3o6n_A APL1; leucine-rich repe 100.0 2.6E-35 9E-40 329.3 20.6 326 262-632 45-376 (390)
59 3oja_B Anopheles plasmodium-re 100.0 4.6E-35 1.6E-39 345.4 20.7 332 232-633 50-383 (597)
60 3fxz_A Serine/threonine-protei 100.0 3E-34 1E-38 307.7 21.0 200 660-865 19-219 (297)
61 4eqm_A Protein kinase; transfe 100.0 3.3E-34 1.1E-38 307.0 21.3 206 656-865 6-215 (294)
62 4fcg_A Uncharacterized protein 100.0 1.2E-34 4E-39 314.9 17.2 267 22-323 23-314 (328)
63 1o6l_A RAC-beta serine/threoni 100.0 5.7E-34 1.9E-38 310.1 22.4 201 660-865 4-208 (337)
64 3s95_A LIMK-1, LIM domain kina 100.0 1.2E-33 4.1E-38 305.4 24.1 205 659-866 8-226 (310)
65 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.7E-34 9.4E-39 314.7 18.7 205 656-865 18-227 (353)
66 3zgw_A Maternal embryonic leuc 100.0 5.4E-34 1.9E-38 311.1 20.8 201 660-864 9-212 (347)
67 4aw2_A Serine/threonine-protei 100.0 9.5E-35 3.3E-39 326.3 15.1 203 660-865 73-284 (437)
68 4fmz_A Internalin; leucine ric 100.0 2.3E-33 7.9E-38 308.4 25.6 305 84-441 40-345 (347)
69 3fe3_A MAP/microtubule affinit 100.0 7.2E-34 2.5E-38 308.5 20.2 202 658-865 12-217 (328)
70 4dc2_A Protein kinase C IOTA t 100.0 9.3E-34 3.2E-38 314.0 20.6 203 658-865 49-256 (396)
71 2vd5_A DMPK protein; serine/th 100.0 2E-34 6.9E-39 321.4 15.2 204 659-865 59-273 (412)
72 1fot_A TPK1 delta, CAMP-depend 100.0 2.3E-33 7.8E-38 303.1 22.7 198 660-865 5-206 (318)
73 4fmz_A Internalin; leucine ric 100.0 3.8E-33 1.3E-37 306.7 24.8 308 107-506 39-346 (347)
74 1xjd_A Protein kinase C, theta 100.0 1.4E-33 4.9E-38 307.7 21.2 202 659-865 15-221 (345)
75 3v8s_A RHO-associated protein 100.0 1.8E-34 6.2E-39 321.5 14.3 202 659-865 67-276 (410)
76 3niz_A Rhodanese family protei 100.0 1.3E-33 4.6E-38 304.8 20.5 209 655-868 15-226 (311)
77 4fr4_A YANK1, serine/threonine 100.0 2.1E-33 7.3E-38 310.1 22.2 204 656-865 10-220 (384)
78 2i0e_A Protein kinase C-beta I 100.0 1.7E-33 5.9E-38 308.2 21.1 202 659-865 18-224 (353)
79 3a8x_A Protein kinase C IOTA t 100.0 2.4E-33 8.3E-38 306.6 21.4 201 659-864 7-212 (345)
80 4hcu_A Tyrosine-protein kinase 100.0 1.4E-33 4.9E-38 298.2 18.7 201 660-864 9-210 (269)
81 2yab_A Death-associated protei 100.0 6.9E-33 2.4E-37 304.4 22.5 200 660-865 11-221 (361)
82 3a62_A Ribosomal protein S6 ki 100.0 3.6E-33 1.2E-37 303.6 20.0 202 659-865 15-224 (327)
83 1rdq_E PKA C-alpha, CAMP-depen 100.0 5.6E-33 1.9E-37 304.1 21.3 199 659-865 39-241 (350)
84 1ob3_A PFPK5, cell division co 100.0 4E-33 1.4E-37 297.9 19.5 199 661-864 2-203 (288)
85 3c0i_A Peripheral plasma membr 100.0 2.5E-33 8.7E-38 307.9 18.3 206 655-864 18-235 (351)
86 2r5t_A Serine/threonine-protei 100.0 6.3E-33 2.1E-37 305.9 21.2 202 659-865 36-242 (373)
87 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.7E-33 9.3E-38 295.8 17.6 201 660-864 7-208 (268)
88 2izr_A Casein kinase I isoform 100.0 3.5E-33 1.2E-37 304.5 18.7 206 655-866 3-221 (330)
89 3h4j_B AMPK kdaid, SNF1-like p 100.0 5.2E-33 1.8E-37 302.2 19.8 201 659-866 7-212 (336)
90 2ft3_A Biglycan; proteoglycan, 100.0 1.6E-32 5.5E-37 299.4 23.8 126 90-222 35-160 (332)
91 2y0a_A Death-associated protei 100.0 8.7E-33 3E-37 300.4 21.3 201 659-865 9-220 (326)
92 3p86_A Serine/threonine-protei 100.0 5E-33 1.7E-37 299.8 19.3 202 659-865 35-242 (309)
93 1tki_A Titin; serine kinase, m 100.0 3.6E-33 1.2E-37 302.5 18.1 200 660-865 4-206 (321)
94 2qkw_B Protein kinase; three-h 100.0 6E-33 2E-37 301.5 19.0 207 659-868 37-247 (321)
95 3gen_A Tyrosine-protein kinase 100.0 4.3E-33 1.5E-37 296.9 17.5 202 659-864 22-224 (283)
96 1xku_A Decorin; proteoglycan, 100.0 5.8E-32 2E-36 294.8 26.8 274 88-415 52-329 (330)
97 3soa_A Calcium/calmodulin-depe 100.0 1.2E-32 4.2E-37 310.4 22.1 200 660-864 10-215 (444)
98 2c30_A Serine/threonine-protei 100.0 1.9E-32 6.4E-37 297.1 22.6 196 663-864 47-243 (321)
99 3e7e_A HBUB1, BUB1A, mitotic c 100.0 7.9E-33 2.7E-37 306.2 19.9 199 660-864 64-287 (365)
100 3soc_A Activin receptor type-2 100.0 1.1E-32 3.6E-37 299.4 20.4 202 659-867 22-243 (322)
101 3kul_A Ephrin type-A receptor 100.0 5.6E-33 1.9E-37 301.8 18.0 205 657-864 45-257 (325)
102 1kob_A Twitchin; kinase, intra 100.0 6.4E-33 2.2E-37 307.4 18.8 201 660-865 50-253 (387)
103 4euu_A Serine/threonine-protei 100.0 1.4E-32 4.7E-37 298.3 20.9 205 658-867 6-228 (319)
104 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.9E-32 6.5E-37 314.0 22.5 203 660-866 184-393 (543)
105 3tki_A Serine/threonine-protei 100.0 3.4E-33 1.1E-37 303.2 15.0 202 660-865 6-211 (323)
106 3kn6_A Ribosomal protein S6 ki 100.0 2.1E-32 7.2E-37 297.1 21.2 198 662-867 9-214 (325)
107 2ft3_A Biglycan; proteoglycan, 100.0 3.2E-32 1.1E-36 297.1 22.6 292 113-480 34-331 (332)
108 3o0g_A Cell division protein k 100.0 2.9E-32 9.8E-37 291.9 21.8 198 661-863 2-203 (292)
109 2bdw_A Hypothetical protein K1 100.0 2.5E-32 8.4E-37 300.9 21.8 199 660-864 28-232 (362)
110 2acx_A G protein-coupled recep 100.0 1.5E-32 5.1E-37 315.4 20.6 203 659-866 182-389 (576)
111 3uim_A Brassinosteroid insensi 100.0 3.3E-33 1.1E-37 304.3 14.4 201 660-863 29-236 (326)
112 2zv2_A Calcium/calmodulin-depe 100.0 1.4E-32 4.6E-37 295.3 18.6 204 655-864 7-242 (298)
113 2psq_A Fibroblast growth facto 100.0 1.6E-32 5.4E-37 303.6 19.4 203 660-865 80-309 (370)
114 3ork_A Serine/threonine protei 100.0 7.1E-33 2.4E-37 299.4 16.2 203 659-865 10-222 (311)
115 4ejn_A RAC-alpha serine/threon 100.0 1.4E-32 4.8E-37 312.4 18.7 202 659-865 146-352 (446)
116 2y94_A 5'-AMP-activated protei 100.0 3.2E-32 1.1E-36 308.8 21.6 203 657-865 12-219 (476)
117 3f3z_A Calcium/calmodulin-depe 100.0 6.2E-32 2.1E-36 286.9 22.3 199 660-865 8-210 (277)
118 1xku_A Decorin; proteoglycan, 100.0 1.8E-31 6E-36 291.0 26.3 251 112-425 31-283 (330)
119 3t9t_A Tyrosine-protein kinase 100.0 2.1E-32 7.1E-37 288.9 18.0 201 660-864 7-208 (267)
120 2pmi_A Negative RE, cyclin-dep 100.0 1.7E-32 5.9E-37 297.0 17.6 201 660-865 4-212 (317)
121 2h34_A Serine/threonine-protei 100.0 6.9E-32 2.3E-36 291.3 22.0 201 660-864 33-237 (309)
122 3ugc_A Tyrosine-protein kinase 100.0 1.1E-32 3.8E-37 295.5 15.5 204 658-864 7-219 (295)
123 2x4f_A Myosin light chain kina 100.0 3.4E-32 1.2E-36 300.9 19.6 199 662-865 90-291 (373)
124 3uc3_A Serine/threonine-protei 100.0 2.6E-32 9E-37 300.7 18.4 200 660-866 19-222 (361)
125 1csn_A Casein kinase-1; phosph 100.0 6.2E-32 2.1E-36 290.2 20.5 204 657-866 6-222 (298)
126 3cok_A Serine/threonine-protei 100.0 3.6E-32 1.2E-36 288.9 18.2 202 660-865 10-215 (278)
127 2w4o_A Calcium/calmodulin-depe 100.0 3.7E-32 1.3E-36 298.2 18.6 198 660-865 52-253 (349)
128 2rku_A Serine/threonine-protei 100.0 1.6E-31 5.4E-36 286.5 23.0 203 658-865 12-218 (294)
129 1vzo_A Ribosomal protein S6 ki 100.0 2E-32 7E-37 301.2 15.9 203 659-865 52-265 (355)
130 2qol_A Ephrin receptor; recept 100.0 2.3E-32 7.8E-37 302.4 16.2 202 660-864 44-253 (373)
131 2owb_A Serine/threonine-protei 100.0 1.7E-31 5.9E-36 291.6 22.9 202 659-865 39-244 (335)
132 3dbq_A Dual specificity protei 100.0 5.6E-32 1.9E-36 296.5 19.0 200 659-864 7-222 (343)
133 1z7x_W Ribonuclease inhibitor; 100.0 9E-36 3.1E-40 341.2 -11.8 63 112-174 3-70 (461)
134 3g33_A Cell division protein k 100.0 1E-31 3.6E-36 289.9 20.7 202 658-865 6-222 (308)
135 3gni_B Strad alpha; kinase fol 100.0 1.1E-31 3.6E-36 299.8 21.3 203 660-865 24-240 (389)
136 3pfq_A PKC-B, PKC-beta, protei 100.0 8.3E-32 2.8E-36 319.5 21.6 202 659-865 339-545 (674)
137 3op5_A Serine/threonine-protei 100.0 6E-32 2E-36 298.9 19.0 202 660-865 34-264 (364)
138 3fdn_A Serine/threonine-protei 100.0 1.1E-31 3.8E-36 285.3 20.4 200 659-865 7-210 (279)
139 4agu_A Cyclin-dependent kinase 100.0 8.3E-32 2.8E-36 291.2 19.6 201 660-865 2-206 (311)
140 3lb7_A RAF proto-oncogene seri 100.0 6.4E-32 2.2E-36 290.9 18.6 201 659-865 34-240 (307)
141 1mp8_A Focal adhesion kinase 1 100.0 2.7E-32 9.2E-37 290.3 15.5 203 659-865 13-221 (281)
142 2eue_A Carbon catabolite derep 100.0 7E-32 2.4E-36 286.2 18.6 200 659-865 11-215 (275)
143 2qr7_A Ribosomal protein S6 ki 100.0 3.5E-32 1.2E-36 297.0 16.3 197 659-864 20-222 (342)
144 3gbz_A Kinase, CMGC CDK; ssgci 100.0 4.7E-32 1.6E-36 295.3 16.4 204 656-865 29-241 (329)
145 2a2a_A Death-associated protei 100.0 2.2E-31 7.7E-36 289.0 21.7 200 660-865 11-221 (321)
146 3cbl_A C-FES, proto-oncogene t 100.0 2.5E-32 8.4E-37 303.1 14.3 202 660-864 113-318 (377)
147 1nxk_A MAP kinase-activated pr 100.0 1.6E-31 5.6E-36 298.3 21.0 199 659-867 59-268 (400)
148 3cc6_A Protein tyrosine kinase 100.0 7.7E-32 2.6E-36 286.8 17.4 202 659-864 10-217 (281)
149 3qd2_B Eukaryotic translation 100.0 1.8E-31 6.1E-36 291.4 20.7 199 661-862 6-276 (332)
150 3tt0_A Basic fibroblast growth 100.0 1.4E-31 4.8E-36 297.8 20.2 202 660-864 68-296 (382)
151 2ac3_A MAP kinase-interacting 100.0 1E-31 3.5E-36 291.1 18.7 202 661-866 12-230 (316)
152 3mtl_A Cell division protein k 100.0 1.7E-32 5.7E-37 298.1 12.5 200 661-865 2-204 (324)
153 4f0f_A Serine/threonine-protei 100.0 2.5E-31 8.6E-36 283.8 21.4 199 658-865 16-231 (287)
154 1z7x_W Ribonuclease inhibitor; 100.0 1.3E-35 4.4E-40 339.9 -12.9 359 88-483 3-412 (461)
155 3ttj_A Mitogen-activated prote 100.0 1.2E-31 4.2E-36 304.8 19.9 200 657-865 58-266 (464)
156 3dls_A PAS domain-containing s 100.0 1.2E-31 4E-36 292.4 18.7 218 660-883 23-260 (335)
157 3kk8_A Calcium/calmodulin depe 100.0 2.9E-31 1E-35 282.8 21.3 199 660-864 5-209 (284)
158 4e5w_A Tyrosine-protein kinase 100.0 1.1E-31 3.7E-36 289.0 18.1 200 661-863 21-230 (302)
159 1qcf_A Haematopoetic cell kina 100.0 7.5E-32 2.6E-36 306.7 17.7 199 661-864 188-388 (454)
160 2zmd_A Dual specificity protei 100.0 2.5E-31 8.5E-36 296.0 21.3 199 660-864 55-269 (390)
161 4eut_A Serine/threonine-protei 100.0 5.4E-32 1.8E-36 302.5 16.0 205 658-867 6-228 (396)
162 2vgo_A Serine/threonine-protei 100.0 3.1E-31 1.1E-35 282.6 21.2 200 659-865 12-215 (284)
163 2jam_A Calcium/calmodulin-depe 100.0 2.1E-31 7.3E-36 286.9 20.1 199 659-864 7-209 (304)
164 1qpc_A LCK kinase; alpha beta 100.0 1.2E-31 4.2E-36 285.0 17.8 200 660-864 12-213 (279)
165 3l9p_A Anaplastic lymphoma kin 100.0 6.1E-32 2.1E-36 298.6 16.1 203 659-864 69-289 (367)
166 2h6d_A 5'-AMP-activated protei 100.0 2.5E-31 8.4E-36 282.1 19.9 204 656-865 6-214 (276)
167 3llt_A Serine/threonine kinase 100.0 2.4E-31 8.2E-36 293.8 20.6 199 658-865 32-262 (360)
168 3qup_A Tyrosine-protein kinase 100.0 1E-31 3.5E-36 292.1 17.3 205 658-865 20-243 (323)
169 1luf_A Muscle-specific tyrosin 100.0 8E-32 2.7E-36 295.6 16.4 202 660-864 46-279 (343)
170 3lxl_A Tyrosine-protein kinase 100.0 8.1E-32 2.8E-36 293.3 16.3 207 655-864 17-232 (327)
171 3kfa_A Tyrosine-protein kinase 100.0 9.7E-32 3.3E-36 287.2 16.5 202 659-864 11-215 (288)
172 1ua2_A CAK, cell division prot 100.0 1.3E-31 4.4E-36 294.0 17.6 202 659-865 8-216 (346)
173 3dtc_A Mitogen-activated prote 100.0 1.3E-31 4.4E-36 283.5 17.0 196 660-864 6-216 (271)
174 4fvq_A Tyrosine-protein kinase 100.0 6.9E-32 2.4E-36 288.5 15.0 195 660-862 7-218 (289)
175 3com_A Serine/threonine-protei 100.0 5.1E-31 1.7E-35 285.4 21.9 199 660-864 28-227 (314)
176 4hgt_A Casein kinase I isoform 100.0 4.1E-31 1.4E-35 283.5 20.9 205 659-869 7-222 (296)
177 3p1a_A MYT1 kinase, membrane-a 100.0 4E-31 1.4E-35 285.5 20.6 196 661-863 57-256 (311)
178 3oz6_A Mitogen-activated prote 100.0 1.4E-31 4.7E-36 298.7 17.5 201 659-865 7-234 (388)
179 3eqc_A Dual specificity mitoge 100.0 1.1E-31 3.7E-36 296.6 16.4 201 658-865 30-233 (360)
180 3bhy_A Death-associated protei 100.0 3.8E-31 1.3E-35 281.8 20.0 200 660-865 4-214 (283)
181 2pml_X PFPK7, Ser/Thr protein 100.0 1.3E-31 4.4E-36 294.6 16.8 206 654-866 24-256 (348)
182 3mi9_A Cell division protein k 100.0 2E-31 6.8E-36 293.3 18.1 202 660-865 16-232 (351)
183 3vhe_A Vascular endothelial gr 100.0 7.2E-32 2.5E-36 298.0 14.6 203 660-865 21-299 (359)
184 4aaa_A Cyclin-dependent kinase 100.0 3E-31 1E-35 289.3 19.2 202 659-865 23-228 (331)
185 3is5_A Calcium-dependent prote 100.0 4.6E-31 1.6E-35 281.3 20.1 200 660-865 21-228 (285)
186 3uzp_A CKI-delta, CKID, casein 100.0 6.4E-31 2.2E-35 282.0 21.3 203 659-867 7-220 (296)
187 1t46_A HOMO sapiens V-KIT hard 100.0 2E-31 6.8E-36 288.4 17.4 202 661-865 23-251 (313)
188 1u5q_A Serine/threonine protei 100.0 3.9E-31 1.3E-35 289.6 19.8 195 661-864 54-255 (348)
189 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.7E-31 5.8E-36 303.5 17.5 199 661-864 184-384 (452)
190 3poz_A Epidermal growth factor 100.0 1.3E-31 4.3E-36 291.6 15.7 205 657-865 11-223 (327)
191 1t4h_A Serine/threonine-protei 100.0 1.2E-30 4.1E-35 278.9 22.9 197 660-864 25-231 (290)
192 3rp9_A Mitogen-activated prote 100.0 2.2E-31 7.5E-36 303.9 18.1 196 657-857 49-279 (458)
193 3a7i_A MST3 kinase, serine/thr 100.0 1.2E-30 4.1E-35 280.9 22.8 198 661-864 22-221 (303)
194 1opk_A P150, C-ABL, proto-onco 100.0 1.4E-31 4.8E-36 307.4 16.5 201 661-865 220-423 (495)
195 3kex_A Receptor tyrosine-prote 100.0 1.1E-31 3.7E-36 291.9 14.6 205 657-865 9-221 (325)
196 2v62_A Serine/threonine-protei 100.0 2.3E-31 8E-36 291.8 17.2 200 660-864 36-262 (345)
197 2j7t_A Serine/threonine-protei 100.0 1.6E-31 5.6E-36 287.5 15.7 202 660-865 18-225 (302)
198 3f66_A Hepatocyte growth facto 100.0 4.5E-31 1.5E-35 283.5 19.0 201 661-864 25-235 (298)
199 3byv_A Rhoptry kinase; malaria 100.0 7.2E-32 2.5E-36 299.6 13.1 198 660-866 72-317 (377)
200 3q4u_A Activin receptor type-1 100.0 3.1E-31 1.1E-35 285.2 17.6 202 659-866 6-237 (301)
201 2ivs_A Proto-oncogene tyrosine 100.0 2.5E-31 8.5E-36 287.8 16.9 203 660-865 22-256 (314)
202 1u59_A Tyrosine-protein kinase 100.0 4.7E-31 1.6E-35 281.7 18.7 200 662-865 10-217 (287)
203 2wqm_A Serine/threonine-protei 100.0 6.2E-31 2.1E-35 284.1 19.8 202 659-864 30-238 (310)
204 3og7_A AKAP9-BRAF fusion prote 100.0 2.4E-31 8.2E-36 284.2 16.3 202 657-864 20-227 (289)
205 3hko_A Calcium/calmodulin-depe 100.0 2.6E-31 9E-36 291.7 17.1 202 660-864 25-278 (345)
206 3pls_A Macrophage-stimulating 100.0 8.3E-31 2.9E-35 281.4 20.4 199 662-863 22-229 (298)
207 3n9x_A Phosphotransferase; mal 100.0 3.4E-31 1.2E-35 299.3 18.2 202 657-863 22-253 (432)
208 1k9a_A Carboxyl-terminal SRC k 100.0 6.6E-31 2.3E-35 298.4 20.4 196 660-865 192-390 (450)
209 1rjb_A FL cytokine receptor; k 100.0 2.9E-31 9.9E-36 291.3 16.8 203 660-865 44-278 (344)
210 1mqb_A Ephrin type-A receptor 100.0 5.1E-31 1.7E-35 287.5 18.6 202 660-864 43-253 (333)
211 2pvf_A Fibroblast growth facto 100.0 5E-31 1.7E-35 288.0 18.5 202 660-864 34-262 (334)
212 3mwu_A Calmodulin-domain prote 100.0 7.2E-31 2.5E-35 301.7 20.7 199 660-865 21-225 (486)
213 3kmu_A ILK, integrin-linked ki 100.0 5.4E-31 1.8E-35 278.6 18.1 196 659-864 8-213 (271)
214 2yex_A Serine/threonine-protei 100.0 6.2E-31 2.1E-35 279.0 18.5 203 660-866 6-212 (276)
215 2eva_A TAK1 kinase - TAB1 chim 100.0 7.9E-31 2.7E-35 282.6 19.6 196 660-864 7-205 (307)
216 3lzb_A Epidermal growth factor 100.0 3.9E-31 1.3E-35 287.6 17.2 205 657-865 11-223 (327)
217 2buj_A Serine/threonine-protei 100.0 6.8E-31 2.3E-35 284.8 19.1 201 660-863 28-247 (317)
218 3c1x_A Hepatocyte growth facto 100.0 3.4E-31 1.2E-35 292.6 16.9 202 661-865 89-300 (373)
219 3eb0_A Putative uncharacterize 100.0 1.1E-30 3.8E-35 290.7 21.2 196 660-865 6-245 (383)
220 1cm8_A Phosphorylated MAP kina 100.0 4.7E-31 1.6E-35 291.4 18.0 198 658-865 22-229 (367)
221 3pg1_A Mitogen-activated prote 100.0 5.4E-31 1.9E-35 291.2 18.6 200 660-865 21-237 (362)
222 3lij_A Calcium/calmodulin depe 100.0 1.2E-30 4.1E-35 300.3 21.9 199 660-865 36-240 (494)
223 2r3i_A Cell division protein k 100.0 1E-30 3.5E-35 280.8 19.9 200 661-865 3-207 (299)
224 3lxp_A Non-receptor tyrosine-p 100.0 7.3E-31 2.5E-35 284.5 18.8 197 663-864 33-239 (318)
225 3nyv_A Calmodulin-domain prote 100.0 5.2E-31 1.8E-35 303.0 18.4 200 659-865 24-230 (484)
226 2w1i_A JAK2; chromosomal rearr 100.0 5.3E-31 1.8E-35 286.7 17.4 203 659-864 39-250 (326)
227 2nru_A Interleukin-1 receptor- 100.0 9.7E-31 3.3E-35 282.2 19.2 201 663-868 33-240 (307)
228 1p4o_A Insulin-like growth fac 100.0 4.2E-31 1.5E-35 287.1 16.4 202 660-864 24-243 (322)
229 3q5i_A Protein kinase; CDPK, m 100.0 1.2E-30 4.1E-35 301.1 20.9 200 659-865 34-250 (504)
230 1x8b_A WEE1HU, WEE1-like prote 100.0 1.9E-30 6.4E-35 277.1 20.5 196 660-863 10-232 (289)
231 3i6u_A CDS1, serine/threonine- 100.0 6.7E-31 2.3E-35 295.5 17.6 200 660-866 134-348 (419)
232 2xrw_A Mitogen-activated prote 100.0 1.1E-30 3.7E-35 289.3 19.0 199 658-865 22-229 (371)
233 4e7w_A Glycogen synthase kinas 100.0 6.9E-31 2.3E-35 293.0 17.5 201 657-866 36-246 (394)
234 2a19_B Interferon-induced, dou 100.0 1.5E-30 5.2E-35 277.3 19.4 195 660-863 10-222 (284)
235 3ll6_A Cyclin G-associated kin 100.0 1.7E-30 5.9E-35 284.2 20.3 201 660-864 27-255 (337)
236 2h8h_A Proto-oncogene tyrosine 100.0 3.7E-31 1.3E-35 306.7 15.7 201 660-865 266-468 (535)
237 2y7j_A Phosphorylase B kinase 100.0 2.1E-30 7.3E-35 286.1 21.1 199 660-864 93-307 (365)
238 2jii_A Serine/threonine-protei 100.0 3.6E-31 1.2E-35 291.3 14.7 197 660-865 41-271 (352)
239 1fvr_A Tyrosine-protein kinase 100.0 5.8E-31 2E-35 286.6 16.0 202 659-865 23-245 (327)
240 2clq_A Mitogen-activated prote 100.0 1.9E-30 6.6E-35 278.1 19.7 194 667-864 28-227 (295)
241 2w5a_A Serine/threonine-protei 100.0 2.7E-31 9.3E-36 282.3 13.0 202 660-865 5-219 (279)
242 3kvw_A DYRK2, dual specificity 100.0 6.1E-31 2.1E-35 296.6 16.6 199 658-865 94-302 (429)
243 3q60_A ROP5B; pseudokinase, tr 100.0 3.2E-31 1.1E-35 293.8 14.1 198 660-865 61-296 (371)
244 3nsz_A CK II alpha, casein kin 100.0 2.7E-30 9.2E-35 281.8 21.0 195 659-865 34-234 (330)
245 3qyz_A Mitogen-activated prote 100.0 7.4E-31 2.5E-35 290.1 16.7 202 660-867 26-237 (364)
246 1wak_A Serine/threonine-protei 100.0 8.8E-31 3E-35 293.5 17.5 204 658-870 34-301 (397)
247 3mdy_A Bone morphogenetic prot 100.0 4.9E-30 1.7E-34 280.7 22.7 191 659-858 35-248 (337)
248 2z80_A TOLL-like receptor 2, v 100.0 8E-31 2.7E-35 288.6 16.5 288 46-419 22-315 (353)
249 1phk_A Phosphorylase kinase; g 100.0 3.1E-30 1.1E-34 277.0 20.4 200 659-864 15-231 (298)
250 3sv0_A Casein kinase I-like; t 100.0 2.5E-30 8.4E-35 293.9 20.3 203 659-867 5-218 (483)
251 1j1b_A Glycogen synthase kinas 100.0 1.3E-30 4.4E-35 293.2 17.8 197 659-865 52-260 (420)
252 2fst_X Mitogen-activated prote 100.0 7.8E-31 2.7E-35 289.3 15.5 199 657-865 25-233 (367)
253 3lm5_A Serine/threonine-protei 100.0 1.4E-30 4.9E-35 283.3 17.2 200 661-865 28-236 (327)
254 1xbb_A Tyrosine-protein kinase 100.0 1.2E-30 4.1E-35 279.1 16.2 199 661-864 16-223 (291)
255 3fme_A Dual specificity mitoge 100.0 1.7E-30 5.9E-35 277.7 17.4 200 659-864 5-215 (290)
256 2wtk_C Serine/threonine-protei 100.0 2.9E-30 9.9E-35 278.2 19.2 202 659-864 3-215 (305)
257 3g2f_A Bone morphogenetic prot 100.0 8.1E-31 2.8E-35 286.7 14.8 198 659-865 11-238 (336)
258 3rgf_A Cyclin-dependent kinase 100.0 1.7E-30 5.7E-35 291.6 17.6 199 662-866 21-240 (405)
259 2vwi_A Serine/threonine-protei 100.0 6.8E-31 2.3E-35 282.8 13.6 203 659-864 13-229 (303)
260 2ozo_A Tyrosine-protein kinase 100.0 1.4E-30 4.9E-35 306.1 17.2 196 666-865 341-543 (613)
261 1byg_A CSK, protein (C-termina 100.0 1.7E-30 5.7E-35 276.0 16.0 197 659-865 19-218 (278)
262 2x7f_A TRAF2 and NCK-interacti 100.0 3E-30 1E-34 280.9 18.3 200 660-864 23-236 (326)
263 2xir_A Vascular endothelial gr 100.0 7.4E-31 2.5E-35 284.4 13.4 203 660-865 26-254 (316)
264 3an0_A Dual specificity mitoge 100.0 2.1E-30 7.3E-35 283.8 17.1 201 658-864 48-259 (340)
265 2ycf_A Serine/threonine-protei 100.0 3.2E-30 1.1E-34 280.1 18.3 200 660-866 9-223 (322)
266 4exu_A Mitogen-activated prote 100.0 4E-30 1.4E-34 284.8 19.4 199 656-865 37-245 (371)
267 3brb_A Proto-oncogene tyrosine 100.0 2.7E-30 9.3E-35 279.5 17.4 203 660-865 33-253 (313)
268 2i6l_A Mitogen-activated prote 100.0 2.6E-30 8.8E-35 280.6 17.0 204 657-866 7-229 (320)
269 1u46_A ACK-1, activated CDC42 100.0 1.2E-30 4.2E-35 279.0 14.1 202 659-864 16-227 (291)
270 2i1m_A Macrophage colony-stimu 100.0 1.4E-30 4.8E-35 284.4 14.8 202 661-865 46-270 (333)
271 3cek_A Dual specificity protei 100.0 6.4E-30 2.2E-34 276.5 19.3 201 659-865 26-242 (313)
272 1z57_A Dual specificity protei 100.0 5.1E-30 1.8E-34 280.6 18.7 199 658-865 11-237 (339)
273 2yfx_A Tyrosine-protein kinase 100.0 2E-30 6.9E-35 282.3 15.1 205 658-865 27-249 (327)
274 1zy4_A Serine/threonine-protei 100.0 1.4E-29 4.9E-34 272.4 20.7 193 661-857 6-226 (303)
275 3ogk_B Coronatine-insensitive 100.0 7.5E-33 2.6E-37 327.5 -6.1 432 51-506 39-526 (592)
276 2j0j_A Focal adhesion kinase 1 100.0 6.1E-30 2.1E-34 302.5 18.7 202 660-865 389-596 (656)
277 1blx_A Cyclin-dependent kinase 100.0 7.4E-30 2.5E-34 277.8 17.9 200 660-865 10-222 (326)
278 2z80_A TOLL-like receptor 2, v 100.0 3.9E-30 1.3E-34 283.1 15.6 286 260-612 29-319 (353)
279 2wei_A Calmodulin-domain prote 100.0 1.1E-29 3.6E-34 271.1 18.3 198 660-864 21-224 (287)
280 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.1E-30 1.1E-34 279.9 13.6 199 660-864 32-245 (319)
281 1b6c_B TGF-B superfamily recep 100.0 2E-29 6.9E-34 276.3 20.0 201 659-865 40-270 (342)
282 2b9h_A MAP kinase FUS3, mitoge 100.0 8.7E-30 3E-34 280.6 17.1 201 659-865 9-226 (353)
283 2vx3_A Dual specificity tyrosi 100.0 8.6E-30 3E-34 283.4 17.1 200 659-865 52-261 (382)
284 2eu9_A Dual specificity protei 100.0 1.4E-29 4.9E-34 279.0 18.6 199 658-865 16-242 (355)
285 4fl3_A Tyrosine-protein kinase 100.0 8.1E-30 2.8E-34 300.3 17.4 195 666-865 374-576 (635)
286 3coi_A Mitogen-activated prote 100.0 9.8E-30 3.4E-34 280.0 17.0 198 657-865 20-227 (353)
287 3gxj_A TGF-beta receptor type- 100.0 2.3E-31 7.8E-36 286.5 3.5 199 661-865 3-231 (303)
288 3aln_A Dual specificity mitoge 100.0 2.3E-29 8E-34 273.9 18.8 200 659-864 20-231 (327)
289 1q8y_A SR protein kinase; tran 100.0 1.1E-29 3.7E-34 282.1 16.3 204 655-867 13-240 (373)
290 3fhr_A MAP kinase-activated pr 100.0 7.8E-30 2.7E-34 278.4 14.9 200 657-866 24-233 (336)
291 3a99_A Proto-oncogene serine/t 100.0 9.9E-30 3.4E-34 275.8 15.6 218 659-883 41-279 (320)
292 2iwi_A Serine/threonine-protei 100.0 6.9E-30 2.4E-34 276.2 14.2 219 658-883 28-269 (312)
293 2z66_A Variable lymphocyte rec 100.0 1E-29 3.5E-34 273.9 14.8 253 52-347 5-262 (306)
294 3e3p_A Protein kinase, putativ 100.0 1.7E-29 5.9E-34 279.0 16.3 203 659-866 21-236 (360)
295 2dyl_A Dual specificity mitoge 100.0 3.2E-29 1.1E-33 271.8 18.1 200 659-864 23-231 (318)
296 3p23_A Serine/threonine-protei 100.0 1.7E-29 5.8E-34 284.4 16.3 197 661-864 24-232 (432)
297 3qa8_A MGC80376 protein; kinas 100.0 8.2E-30 2.8E-34 295.2 13.8 200 660-864 13-225 (676)
298 2rio_A Serine/threonine-protei 100.0 3.2E-29 1.1E-33 283.1 18.3 198 661-865 15-243 (434)
299 2z66_A Variable lymphocyte rec 100.0 2.3E-29 7.9E-34 271.2 15.8 181 261-442 77-261 (306)
300 3uqc_A Probable conserved tran 100.0 9.1E-29 3.1E-33 263.0 18.5 179 655-867 25-207 (286)
301 3zyi_A Leucine-rich repeat-con 100.0 1.5E-28 5.3E-33 279.8 21.5 233 80-345 69-302 (452)
302 2pzi_A Probable serine/threoni 100.0 2.7E-29 9.2E-34 300.2 15.7 196 658-866 77-280 (681)
303 4fcg_A Uncharacterized protein 100.0 1.4E-28 4.9E-33 266.9 18.3 225 334-608 82-315 (328)
304 1wwl_A Monocyte differentiatio 100.0 3.6E-30 1.2E-34 277.9 5.5 252 306-608 39-310 (312)
305 3zyj_A Leucine-rich repeat-con 100.0 2.3E-28 7.7E-33 277.4 20.0 255 312-644 45-300 (440)
306 3g06_A SSPH2 (leucine-rich rep 100.0 2.7E-28 9.2E-33 284.6 20.6 289 44-429 12-308 (622)
307 3zyi_A Leucine-rich repeat-con 100.0 2.6E-28 8.8E-33 278.0 20.0 255 312-644 56-311 (452)
308 3oja_A Leucine-rich immune mol 100.0 7.6E-31 2.6E-35 300.4 -1.7 305 334-729 35-351 (487)
309 1ozn_A Reticulon 4 receptor; N 100.0 2.2E-28 7.7E-33 260.5 17.5 261 60-353 7-268 (285)
310 3ogk_B Coronatine-insensitive 100.0 6.7E-31 2.3E-35 310.7 -3.5 417 64-503 73-548 (592)
311 2vuw_A Serine/threonine-protei 100.0 8.3E-30 2.9E-34 278.5 5.2 194 658-863 17-278 (336)
312 3zyj_A Leucine-rich repeat-con 100.0 9.7E-28 3.3E-32 272.2 21.4 240 73-346 52-292 (440)
313 1wwl_A Monocyte differentiatio 100.0 8.4E-30 2.9E-34 275.1 3.9 109 259-395 198-310 (312)
314 3dzo_A Rhoptry kinase domain; 100.0 3.1E-28 1.1E-32 273.2 14.8 197 661-866 78-321 (413)
315 3o53_A Protein LRIM1, AGAP0063 100.0 1.8E-29 6E-34 273.2 4.2 268 263-612 11-281 (317)
316 1ozn_A Reticulon 4 receptor; N 100.0 5.7E-28 1.9E-32 257.4 15.6 231 358-633 33-264 (285)
317 3o53_A Protein LRIM1, AGAP0063 100.0 4E-29 1.4E-33 270.4 6.8 254 257-591 29-284 (317)
318 3m2w_A MAP kinase-activated pr 99.9 1.6E-27 5.4E-32 255.9 18.4 175 660-865 16-201 (299)
319 3g06_A SSPH2 (leucine-rich rep 99.9 6.1E-27 2.1E-31 273.2 23.9 263 262-612 40-302 (622)
320 2o6q_A Variable lymphocyte rec 99.9 3E-26 1E-30 241.8 20.7 168 51-222 2-170 (270)
321 2p1m_B Transport inhibitor res 99.9 4.7E-30 1.6E-34 303.7 -13.0 459 52-605 33-542 (594)
322 3oja_A Leucine-rich immune mol 99.9 5.1E-27 1.7E-31 268.7 10.9 218 260-506 32-250 (487)
323 2z62_A TOLL-like receptor 4, v 99.9 1.8E-25 6E-30 236.9 17.2 217 80-326 22-240 (276)
324 2z62_A TOLL-like receptor 4, v 99.9 3.2E-25 1.1E-29 234.8 17.7 211 358-614 29-244 (276)
325 1p9a_G Platelet glycoprotein I 99.9 6E-25 2.1E-29 233.8 16.4 212 377-645 6-217 (290)
326 4azs_A Methyltransferase WBDD; 99.9 2.1E-26 7.3E-31 267.0 3.4 185 668-861 241-437 (569)
327 2p1m_B Transport inhibitor res 99.9 5.1E-28 1.7E-32 286.2 -10.6 62 532-606 455-518 (594)
328 3rfs_A Internalin B, repeat mo 99.9 1.9E-24 6.6E-29 228.1 12.4 226 89-356 20-245 (272)
329 2o6q_A Variable lymphocyte rec 99.9 3.5E-23 1.2E-27 218.2 22.0 203 89-324 17-219 (270)
330 3goz_A Leucine-rich repeat-con 99.9 4.6E-26 1.6E-30 251.2 -0.2 259 267-546 3-297 (362)
331 3m19_A Variable lymphocyte rec 99.9 7.7E-24 2.6E-28 220.7 15.9 189 51-244 2-190 (251)
332 1p9a_G Platelet glycoprotein I 99.9 1.3E-23 4.5E-28 223.4 18.0 205 353-610 6-211 (290)
333 2xwt_C Thyrotropin receptor; s 99.9 1.4E-23 4.6E-28 217.2 15.7 203 79-320 25-236 (239)
334 2ast_B S-phase kinase-associat 99.9 7.9E-26 2.7E-30 247.0 -1.6 268 50-354 33-314 (336)
335 4glp_A Monocyte differentiatio 99.9 2.3E-24 7.8E-29 232.3 9.1 205 357-608 91-308 (310)
336 3rfs_A Internalin B, repeat mo 99.9 1.6E-23 5.4E-28 221.1 14.7 205 260-514 39-243 (272)
337 4glp_A Monocyte differentiatio 99.9 2.7E-23 9.2E-28 223.9 15.6 227 88-346 64-307 (310)
338 1h6u_A Internalin H; cell adhe 99.9 1E-22 3.6E-27 218.7 17.6 192 356-608 40-231 (308)
339 3goz_A Leucine-rich repeat-con 99.9 1.2E-24 4.2E-29 239.8 1.6 267 291-609 3-299 (362)
340 2ast_B S-phase kinase-associat 99.9 9.5E-24 3.2E-28 230.5 5.5 199 288-504 49-258 (336)
341 2o6s_A Variable lymphocyte rec 99.9 2E-22 7E-27 203.5 13.9 158 51-222 4-161 (208)
342 3m19_A Variable lymphocyte rec 99.9 3.5E-22 1.2E-26 208.1 15.7 182 382-611 15-196 (251)
343 3cvr_A Invasion plasmid antige 99.9 9.6E-23 3.3E-27 234.8 12.2 215 44-309 33-253 (571)
344 2ca6_A RAN GTPase-activating p 99.9 1.4E-24 4.9E-29 241.8 -3.0 244 79-323 23-316 (386)
345 2xwt_C Thyrotropin receptor; s 99.9 4E-22 1.4E-26 206.1 15.4 196 263-503 32-236 (239)
346 2ca6_A RAN GTPase-activating p 99.9 2.5E-24 8.5E-29 239.8 -3.1 257 302-611 24-320 (386)
347 1h6u_A Internalin H; cell adhe 99.9 1.2E-21 4E-26 210.6 16.3 194 85-324 38-231 (308)
348 3en9_A Glycoprotease, O-sialog 99.9 4.6E-23 1.6E-27 237.7 5.6 185 664-863 339-539 (540)
349 4ay9_X Follicle-stimulating ho 99.9 1.9E-21 6.6E-26 213.0 17.7 242 139-439 12-256 (350)
350 4ay9_X Follicle-stimulating ho 99.9 3.8E-21 1.3E-25 210.7 18.5 214 107-355 5-224 (350)
351 3e6j_A Variable lymphocyte rec 99.8 6.4E-21 2.2E-25 195.3 14.8 167 43-224 8-174 (229)
352 3cvr_A Invasion plasmid antige 99.8 3E-21 1E-25 222.3 12.9 190 311-594 60-254 (571)
353 2o6s_A Variable lymphocyte rec 99.8 1.3E-20 4.5E-25 190.2 15.4 163 381-595 28-190 (208)
354 1h6t_A Internalin B; cell adhe 99.8 1.2E-19 4.2E-24 192.9 15.0 190 359-609 26-215 (291)
355 1zar_A RIO2 kinase; serine kin 99.8 2.5E-20 8.7E-25 196.7 9.0 144 662-835 91-252 (282)
356 2v9t_B SLIT homolog 2 protein 99.8 1.1E-19 3.9E-24 184.7 13.0 156 53-222 10-165 (220)
357 1m9s_A Internalin B; cell inva 99.8 1E-19 3.4E-24 212.1 13.1 193 88-326 21-213 (605)
358 2xot_A Amphoterin-induced prot 99.8 7.1E-20 2.4E-24 201.4 10.5 152 384-584 21-177 (361)
359 4b8c_D Glucose-repressible alc 99.8 1E-20 3.6E-25 226.2 4.1 203 23-232 129-339 (727)
360 2v70_A SLIT-2, SLIT homolog 2 99.8 1.2E-19 4.2E-24 184.4 11.3 157 409-612 15-171 (220)
361 2v9t_B SLIT homolog 2 protein 99.8 4.9E-19 1.7E-23 179.9 13.6 148 460-645 25-174 (220)
362 2xot_A Amphoterin-induced prot 99.8 2.5E-19 8.6E-24 197.0 11.7 175 69-247 23-203 (361)
363 1dce_A Protein (RAB geranylger 99.8 4.7E-21 1.6E-25 222.1 -2.4 110 470-613 442-552 (567)
364 2v70_A SLIT-2, SLIT homolog 2 99.8 7.8E-19 2.7E-23 178.4 14.0 152 68-223 15-167 (220)
365 1m9s_A Internalin B; cell inva 99.8 6.2E-19 2.1E-23 205.5 15.0 141 338-506 26-166 (605)
366 1dce_A Protein (RAB geranylger 99.8 2.5E-21 8.7E-26 224.3 -6.7 106 383-509 443-549 (567)
367 1xeu_A Internalin C; cellular 99.8 9.2E-19 3.1E-23 183.1 13.3 170 380-609 18-187 (263)
368 1h6t_A Internalin B; cell adhe 99.8 1.7E-18 5.9E-23 184.1 13.9 84 353-442 108-191 (291)
369 3e6j_A Variable lymphocyte rec 99.8 5.8E-18 2E-22 173.2 16.4 150 91-245 22-171 (229)
370 4ezg_A Putative uncharacterize 99.8 1.3E-18 4.3E-23 173.8 10.9 155 401-608 40-195 (197)
371 4b8c_D Glucose-repressible alc 99.7 5.8E-19 2E-23 211.1 6.2 118 373-510 216-333 (727)
372 1xeu_A Internalin C; cellular 99.7 1.6E-18 5.5E-23 181.3 8.1 124 87-222 18-141 (263)
373 4ezg_A Putative uncharacterize 99.7 4.6E-18 1.6E-22 169.7 10.7 131 85-222 41-172 (197)
374 1w8a_A SLIT protein; signaling 99.7 5.3E-18 1.8E-22 168.3 9.1 179 408-637 11-190 (192)
375 3sb4_A Hypothetical leucine ri 99.7 1.5E-18 5.2E-23 188.3 5.5 291 78-411 13-327 (329)
376 3sb4_A Hypothetical leucine ri 99.7 3.2E-18 1.1E-22 185.7 6.2 291 110-436 23-328 (329)
377 1w8a_A SLIT protein; signaling 99.7 2.9E-17 1E-21 163.0 11.5 128 384-546 11-139 (192)
378 2ell_A Acidic leucine-rich nuc 99.7 6.4E-17 2.2E-21 156.9 11.3 134 86-222 22-160 (168)
379 1zth_A RIO1 serine protein kin 99.7 7.5E-17 2.6E-21 168.1 11.4 138 662-811 48-219 (258)
380 2o6r_A Variable lymphocyte rec 99.7 2.4E-16 8.3E-21 154.2 12.2 135 52-199 5-139 (177)
381 2wfh_A SLIT homolog 2 protein 99.7 4.5E-16 1.5E-20 154.3 12.7 126 92-222 14-139 (193)
382 2je0_A Acidic leucine-rich nuc 99.7 7.5E-17 2.6E-21 153.0 6.7 129 87-218 16-149 (149)
383 2wfh_A SLIT homolog 2 protein 99.7 3.6E-16 1.2E-20 155.0 11.8 135 472-645 13-148 (193)
384 2ell_A Acidic leucine-rich nuc 99.6 2.5E-16 8.5E-21 152.7 8.5 137 64-203 24-165 (168)
385 2o6r_A Variable lymphocyte rec 99.6 1.4E-15 4.9E-20 148.7 12.7 132 90-225 9-140 (177)
386 2je0_A Acidic leucine-rich nuc 99.6 5.4E-16 1.9E-20 147.0 6.1 127 111-240 16-147 (149)
387 4fdw_A Leucine rich hypothetic 99.6 2.6E-14 8.9E-19 158.2 18.7 87 350-439 293-380 (401)
388 1ds9_A Outer arm dynein; leuci 99.6 3.4E-17 1.2E-21 163.5 -4.2 156 401-607 14-185 (198)
389 1a9n_A U2A', U2A'; complex (nu 99.6 2.1E-15 7.2E-20 147.3 6.9 134 83-222 14-153 (176)
390 4gyi_A RIO2 kinase; protein ki 99.6 5.3E-15 1.8E-19 159.5 10.0 138 662-811 96-265 (397)
391 4fdw_A Leucine rich hypothetic 99.5 8.6E-14 2.9E-18 154.0 18.8 265 88-418 113-383 (401)
392 1a9n_A U2A', U2A'; complex (nu 99.5 5.5E-15 1.9E-19 144.4 7.9 134 424-608 14-154 (176)
393 1ds9_A Outer arm dynein; leuci 99.5 3.5E-17 1.2E-21 163.4 -8.5 137 84-226 14-157 (198)
394 4fs7_A Uncharacterized protein 99.5 1.7E-13 5.7E-18 152.5 20.1 218 257-501 157-374 (394)
395 4fs7_A Uncharacterized protein 99.5 2.4E-13 8.2E-18 151.2 20.4 307 84-437 67-374 (394)
396 3g39_A Variable lymphocyte rec 99.5 1.6E-13 5.5E-18 132.9 11.6 104 91-197 12-115 (170)
397 3g39_A Variable lymphocyte rec 99.5 1.4E-13 4.7E-18 133.3 10.8 107 113-223 10-116 (170)
398 2r9u_A Variable lymphocyte rec 99.5 2.2E-13 7.5E-18 132.3 10.9 104 91-197 15-118 (174)
399 2r9u_A Variable lymphocyte rec 99.4 3.8E-13 1.3E-17 130.6 12.2 104 115-222 15-118 (174)
400 2ifg_A High affinity nerve gro 99.3 2.2E-12 7.5E-17 140.8 8.8 108 54-173 8-116 (347)
401 4gt6_A Cell surface protein; l 99.3 2E-10 6.8E-15 127.5 24.7 87 348-437 256-342 (394)
402 4gt6_A Cell surface protein; l 99.3 9.9E-11 3.4E-15 129.9 20.6 111 349-481 280-390 (394)
403 2ifg_A High affinity nerve gro 99.3 5E-12 1.7E-16 138.0 9.6 105 92-199 12-118 (347)
404 3un9_A NLR family member X1; l 99.3 7.1E-14 2.4E-18 153.2 -7.0 40 261-300 210-253 (372)
405 3un9_A NLR family member X1; l 99.2 8.2E-14 2.8E-18 152.7 -7.5 165 135-325 71-254 (372)
406 3tm0_A Aminoglycoside 3'-phosp 99.2 6.5E-11 2.2E-15 123.6 11.6 142 662-810 15-213 (263)
407 4h09_A Hypothetical leucine ri 99.0 9.7E-09 3.3E-13 113.3 22.0 314 84-429 42-356 (379)
408 1nd4_A Aminoglycoside 3'-phosp 99.0 9.1E-10 3.1E-14 114.6 10.5 135 664-810 23-214 (264)
409 4h09_A Hypothetical leucine ri 99.0 2.5E-08 8.5E-13 109.9 20.9 84 130-219 40-123 (379)
410 3rw6_A Nuclear RNA export fact 98.9 6.2E-12 2.1E-16 129.2 -8.4 173 23-200 32-236 (267)
411 2ra8_A Uncharacterized protein 98.8 8.2E-10 2.8E-14 119.8 2.9 205 112-344 107-341 (362)
412 2ra8_A Uncharacterized protein 98.8 1E-09 3.5E-14 119.0 2.4 60 261-321 278-341 (362)
413 3dxp_A Putative acyl-COA dehyd 98.8 1E-08 3.5E-13 112.1 9.9 141 666-810 43-248 (359)
414 3sg8_A APH(2'')-ID; antibiotic 98.6 1.5E-08 5.2E-13 107.9 5.4 185 667-862 26-287 (304)
415 1io0_A Tropomodulin; LRR prote 98.4 6E-09 2.1E-13 101.9 -4.2 94 80-173 28-136 (185)
416 3rw6_A Nuclear RNA export fact 98.4 2.3E-08 7.7E-13 102.7 -2.2 105 84-190 137-257 (267)
417 3r70_A Aminoglycoside phosphot 98.3 1.3E-06 4.6E-11 93.5 10.9 133 666-811 42-238 (320)
418 4gkh_A Aminoglycoside 3'-phosp 98.3 7.9E-06 2.7E-10 85.1 14.3 134 669-810 32-223 (272)
419 3d1u_A Putative fructosamine-3 98.2 4.4E-06 1.5E-10 87.6 11.8 75 666-744 20-97 (288)
420 3tdw_A Gentamicin resistance p 98.2 8.4E-06 2.9E-10 86.5 12.8 135 667-810 25-224 (306)
421 1io0_A Tropomodulin; LRR prote 98.2 2.9E-07 1E-11 89.8 0.6 119 178-322 30-163 (185)
422 3ats_A Putative uncharacterize 98.0 4.7E-06 1.6E-10 90.7 7.4 79 666-744 25-120 (357)
423 3ovc_A Hygromycin-B 4-O-kinase 98.0 1.6E-05 5.4E-10 86.4 10.7 73 666-744 46-121 (362)
424 3e4g_A ATP synthase subunit S, 97.8 4.2E-06 1.4E-10 79.4 0.9 34 89-122 62-95 (176)
425 2q83_A YTAA protein; 2635576, 97.8 0.00014 4.7E-09 78.4 12.9 138 668-810 39-252 (346)
426 3e4g_A ATP synthase subunit S, 97.8 3.6E-06 1.2E-10 79.9 0.1 83 112-194 61-149 (176)
427 2olc_A MTR kinase, methylthior 97.8 9.4E-05 3.2E-09 81.6 11.4 75 666-742 35-120 (397)
428 3jr1_A Putative fructosamine-3 97.6 0.00033 1.1E-08 73.9 11.5 75 666-744 41-118 (312)
429 3f7w_A Putative fructosamine-3 97.5 0.00064 2.2E-08 71.2 12.4 75 665-743 19-96 (288)
430 2pyw_A Uncharacterized protein 97.4 0.0007 2.4E-08 75.2 12.1 80 779-859 231-313 (420)
431 3rfe_A Platelet glycoprotein I 97.4 0.00016 5.3E-09 65.5 5.2 64 574-645 12-77 (130)
432 3dxq_A Choline/ethanolamine ki 97.0 0.0015 5.2E-08 68.7 9.0 71 666-744 23-95 (301)
433 3csv_A Aminoglycoside phosphot 97.0 0.0017 5.9E-08 69.4 9.1 139 668-811 25-218 (333)
434 1zyl_A Hypothetical protein YI 96.9 0.0081 2.8E-07 63.9 13.8 139 668-810 33-223 (328)
435 1pgv_A TMD-1, tropomodulin TMD 96.8 0.00016 5.6E-09 69.8 -0.2 93 377-481 66-169 (197)
436 3feg_A Choline/ethanolamine ki 96.8 0.0023 7.8E-08 69.3 8.7 139 667-810 56-254 (379)
437 1nw1_A Choline kinase (49.2 KD 96.6 0.0049 1.7E-07 68.3 9.8 70 667-742 79-157 (429)
438 3i1a_A Spectinomycin phosphotr 96.6 0.0094 3.2E-07 63.8 11.7 68 670-744 32-108 (339)
439 1pgv_A TMD-1, tropomodulin TMD 96.6 0.00044 1.5E-08 66.8 1.1 17 260-276 96-112 (197)
440 2ppq_A HSK, HK, homoserine kin 96.6 0.0059 2E-07 64.8 9.9 141 667-810 28-217 (322)
441 3rfe_A Platelet glycoprotein I 96.6 0.0025 8.7E-08 57.4 5.9 56 164-222 12-68 (130)
442 2qg7_A Ethanolamine kinase PV0 96.3 0.014 4.9E-07 64.8 10.9 72 667-743 114-187 (458)
443 3c5i_A Choline kinase; choline 96.0 0.0074 2.5E-07 65.5 6.8 72 667-743 39-120 (369)
444 3f2s_A CK, chetk-alpha, cholin 95.4 0.04 1.4E-06 59.7 9.4 32 779-810 243-280 (401)
445 2yle_A Protein spire homolog 1 95.3 0.076 2.6E-06 51.5 9.9 121 743-882 34-154 (229)
446 3mes_A Choline kinase; malaria 95.0 0.047 1.6E-06 59.8 8.3 71 668-743 77-156 (424)
447 3g15_A CK, chetk-alpha, cholin 89.5 1 3.6E-05 48.9 9.7 30 781-810 245-280 (401)
448 4ann_A ESSB; membrane protein, 68.4 11 0.00036 36.5 7.1 115 715-863 43-158 (215)
449 4ano_A ESSB; membrane protein, 57.6 29 0.00099 33.5 7.9 82 715-808 48-131 (219)
450 3cxl_A N-chimerin; SH2, RHO-GA 56.2 1.7 5.8E-05 48.1 -1.2 62 664-728 145-215 (463)
451 2lz0_A Uncharacterized protein 46.2 39 0.0013 28.0 6.1 45 172-218 8-52 (100)
452 2x6h_A GH13170P, VPS34, phosph 33.3 4.8E+02 0.016 29.9 14.2 25 785-809 551-575 (696)
453 1cja_A Protein (actin-fragmin 32.6 1.6E+02 0.0055 30.3 9.1 140 665-811 73-238 (342)
454 2lz0_A Uncharacterized protein 26.2 76 0.0026 26.2 4.6 42 151-193 11-52 (100)
455 3ls8_A Phosphatidylinositol 3- 24.5 7.9E+02 0.027 27.6 13.9 25 785-809 477-501 (614)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.3e-85 Score=799.77 Aligned_cols=620 Identities=31% Similarity=0.463 Sum_probs=494.7
Q ss_pred ccCCCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcccCCccccCCcEEEEEEeccccccc---ccc-------------
Q 047790 19 TAIDEPKQERRSLVHFKNSLQNPQVLSGWNKTTRHCHWFGVKCRHSRVVSLVIQTQSLKGP---VSP------------- 82 (885)
Q Consensus 19 ~~~~~~~~~~~aLl~~k~~~~~~~~~~~w~~~~~~c~w~gv~c~~~~v~~l~l~~~~l~g~---~~~------------- 82 (885)
++.++.++||+||++||+++.+|..+++|..++|||+|.||+|+.++|+++++++.++.|. +|+
T Consensus 5 ~~~~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~ 84 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLPDKNLLPDWSSNKNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFL 84 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGGGSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEEC
T ss_pred ccccCCHHHHHHHHHHHhhCCCcccccCCCCCCCCcCCcceEECCCcEEEEECCCCCcCCccCccChhHhccCcccccCC
Confidence 3345678899999999999988668999998899999999999978999999999999887 554
Q ss_pred ----------cccCCCCCCEEecCCCcccCcCCc--CccCcCCCCEEeccCCcCCCCCCccc-cccccccEeeeeccCCC
Q 047790 83 ----------FLFNLSSLRILDLSKNLLFGQLSP--QVSNLKRLKMLSVGENQLSGSIPSQL-GLLTRLETISLRSNSFT 149 (885)
Q Consensus 83 ----------~l~~l~~L~~L~Ls~n~l~~~~~~--~~~~l~~L~~L~L~~n~l~~~~p~~~-~~l~~L~~L~Ls~N~l~ 149 (885)
.++.+++|++|||++|.++|.+|. .++++++|++|+|++|.+++.+|..+ ..+++|++|+|++|+++
T Consensus 85 ~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~ 164 (768)
T 3rgz_A 85 SNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSIS 164 (768)
T ss_dssp TTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCE
T ss_pred cCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccC
Confidence 566777888888888888877777 78888888888888888877777665 67777777777777777
Q ss_pred CCCCcc---ccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCC
Q 047790 150 GEMPSE---LGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIP 226 (885)
Q Consensus 150 ~~~p~~---l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p 226 (885)
+..|.. ++++++|++|++++|++++..| +..+++|++|+|++|++++.+|. ++++++|++|++++|++++.+|
T Consensus 165 ~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~~~~~--l~~l~~L~~L~Ls~n~l~~~~~ 240 (768)
T 3rgz_A 165 GANVVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPF--LGDCSALQHLDISGNKLSGDFS 240 (768)
T ss_dssp EETHHHHHHTTCCTTCCEEECCSSEEESCCB--CTTCTTCCEEECCSSCCCSCCCB--CTTCCSCCEEECCSSCCCSCHH
T ss_pred CcCChhhhhhccCCCCCEEECCCCcccccCC--cccCCcCCEEECcCCcCCCCCcc--cccCCCCCEEECcCCcCCCccc
Confidence 666655 5666666666666666655443 25666777777777777655554 6667777777777777776677
Q ss_pred ccccCCCcccceecccccccc-----------------cccccccCccccCC-CCCcEEEecCCcccccccccccCCCCC
Q 047790 227 PEIGNLKKLSDLYLGIGPYQL-----------------SLFVGRITPEIGNC-SMLKYISLSNNKLSGPIPRELCNSGSL 288 (885)
Q Consensus 227 ~~~~~l~~L~~L~l~~n~~~~-----------------~~~~~~~~~~l~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L 288 (885)
..+.++++|++|+++.|.... ..+.+.+|..+... ++|++|++++|++++.+|..+..+++|
T Consensus 241 ~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L 320 (768)
T 3rgz_A 241 RAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLL 320 (768)
T ss_dssp HHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTC
T ss_pred HHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCc
Confidence 777777777777766554321 01134556665553 777777777777777777777777777
Q ss_pred cEEEccCCCCcCccccc-ccccCCcceeeccccccCCCCCcccCCC--CceeEEeecCccccccCccccC--ccccceee
Q 047790 289 VEINLDGNMLSGTIEDV-FDRCTNLSELVLVNNRISGSIPEYISEL--PLKVFDLQYNNFTGVIPVSLWN--SENLMEFN 363 (885)
Q Consensus 289 ~~L~L~~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~~--~L~~L~Ls~N~l~~~~p~~~~~--l~~L~~L~ 363 (885)
++|+|++|.+++.+|.. +..+++|++|++++|++++.+|..+... .|++|++++|++++.+|..+.. +++|++|+
T Consensus 321 ~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~ 400 (768)
T 3rgz_A 321 ESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELY 400 (768)
T ss_dssp CEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEE
T ss_pred cEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEE
Confidence 77777777776555543 6777777777777777776677666544 5777777777777777776665 67788888
Q ss_pred cccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCc
Q 047790 364 AASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNG 443 (885)
Q Consensus 364 l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 443 (885)
+++|.+.+.+|..+.++++|++|+|++|++++.+|..+..+++|+.|++++|++++.+|..+..+++|++|++++|++++
T Consensus 401 L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 480 (768)
T 3rgz_A 401 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTG 480 (768)
T ss_dssp CCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCS
T ss_pred CCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccC
Confidence 88888888888888888889999999998888888888888889999999999888888888888899999999998887
Q ss_pred cee--------EEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceecccccccc
Q 047790 444 CVV--------VVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGY 515 (885)
Q Consensus 444 ~~~--------~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 515 (885)
.++ ++.|++++|++++.+|.+++.+++|++|+|++|+++|.+|..++.+++|+.|++++|+++|.+|..+..
T Consensus 481 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~ 560 (768)
T 3rgz_A 481 EIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK 560 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGT
T ss_pred cCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhc
Confidence 654 367889999999899999999999999999999999889999999999999999999999888865432
Q ss_pred ------------------------------------------------------ccCCccCCCCCccccccccCcEEEcc
Q 047790 516 ------------------------------------------------------LSGNKLYGSVPTSFGNLNGLTHLDLS 541 (885)
Q Consensus 516 ------------------------------------------------------ls~n~l~~~~p~~~~~l~~L~~L~Ls 541 (885)
++.|.+.|.+|..|+.+++|+.|||+
T Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs 640 (768)
T 3rgz_A 561 QSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMS 640 (768)
T ss_dssp TTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECC
T ss_pred ccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECc
Confidence 12366777788889999999999999
Q ss_pred CCCCCC-----------ceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCC
Q 047790 542 CNELDG-----------IVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEV 610 (885)
Q Consensus 542 ~N~l~~-----------~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~ 610 (885)
+|++++ +..+++++|+++|.||.+++++++|++|||++|+++|.||..+..+++|++||+++|+|+|.+
T Consensus 641 ~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~i 720 (768)
T 3rgz_A 641 YNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPI 720 (768)
T ss_dssp SSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEEC
T ss_pred CCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccC
Confidence 998864 446899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccccccccCCccccccccCCcccccc
Q 047790 611 PRSGICQNLSIISLTGNKDLCEKIMGSDCQILT 643 (885)
Q Consensus 611 p~~~~~~~~~~~~~~~N~~~c~~~~~~~c~~~~ 643 (885)
|..++++++...+|.|||++||.|++ .|....
T Consensus 721 P~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~~~ 752 (768)
T 3rgz_A 721 PEMGQFETFPPAKFLNNPGLCGYPLP-RCDPSN 752 (768)
T ss_dssp CSSSSGGGSCGGGGCSCTEEESTTSC-CCCSCC
T ss_pred CCchhhccCCHHHhcCCchhcCCCCc-CCCCCc
Confidence 99999999999999999999999998 797543
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.1e-66 Score=633.22 Aligned_cols=532 Identities=31% Similarity=0.449 Sum_probs=444.5
Q ss_pred CCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCc--cccccccccEeeeeccCCCCCCCccc-cCCccCc
Q 047790 87 LSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPS--QLGLLTRLETISLRSNSFTGEMPSEL-GDIKQLK 163 (885)
Q Consensus 87 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~l-~~l~~L~ 163 (885)
|++|+.++++.|.+. .+|+.|+++++|++|+|++|.++|.+|. .++.+++|++|+|++|.+++.+|..+ .++++|+
T Consensus 76 L~~L~~l~~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~ 154 (768)
T 3rgz_A 76 LTGLESLFLSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLE 154 (768)
T ss_dssp CTTCCEEECTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCS
T ss_pred cCcccccCCcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCC
Confidence 445555666665553 2558899999999999999999999998 99999999999999999998888876 8999999
Q ss_pred eEEccCCcCCccCCcc---cCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceec
Q 047790 164 SLDFSGNGLNGTIPSR---LGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYL 240 (885)
Q Consensus 164 ~L~Ls~N~l~~~~p~~---~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 240 (885)
+|+|++|++++..|.. +.++++|++|++++|.+++.+| +..+++|++|++++|++++.+|. ++++++|++|++
T Consensus 155 ~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~---~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~L 230 (768)
T 3rgz_A 155 VLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD---VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDI 230 (768)
T ss_dssp EEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCB---CTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEEC
T ss_pred EEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCC---cccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEEC
Confidence 9999999999888877 8899999999999999997666 37899999999999999988887 999999999999
Q ss_pred ccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCccccccccc-CCcceeeccc
Q 047790 241 GIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRC-TNLSELVLVN 319 (885)
Q Consensus 241 ~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~Ls~ 319 (885)
+.|.. .+.+|..++.+++|++|++++|++++.+|.. .+++|++|+|++|.+++.+|..+... ++|++|++++
T Consensus 231 s~n~l-----~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~ 303 (768)
T 3rgz_A 231 SGNKL-----SGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSG 303 (768)
T ss_dssp CSSCC-----CSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCS
T ss_pred cCCcC-----CCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcC
Confidence 76653 4567888899999999999999998877765 77888888888888887777776554 8888888888
Q ss_pred cccCCCCCcccCCC-CceeEEeecCccccccCcc-ccCccccceeecccccccCCCcccccccc-cccEEEccCCccccc
Q 047790 320 NRISGSIPEYISEL-PLKVFDLQYNNFTGVIPVS-LWNSENLMEFNAASNLLEGSLSWEISNAV-ALEKLDLSSNMLTRQ 396 (885)
Q Consensus 320 N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~ 396 (885)
|++++.+|..+..+ .|++|++++|++++.+|.. +..+++|++|++++|.+.+.+|..+..++ +|++|++++|++++.
T Consensus 304 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~ 383 (768)
T 3rgz_A 304 NHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGP 383 (768)
T ss_dssp SEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEE
T ss_pred CcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCC
Confidence 88888888887777 6888888888888777765 78888888888888888888888888776 788888888888877
Q ss_pred Ccccccc--cccccceecccccccCcCCCccCCCCcccEEEcCCcccCccee--------EEEEeecCCcccCCCchhcc
Q 047790 397 IPKKIGN--LTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVV--------VVYLLLNNNMLSGKIPGSLS 466 (885)
Q Consensus 397 ~p~~~~~--l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~--------~~~l~l~~n~l~~~~p~~l~ 466 (885)
+|..+.. +++|++|++++|++++.+|..+.++++|++|++++|++++.++ ++.|++++|.+++.+|..+.
T Consensus 384 ~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~ 463 (768)
T 3rgz_A 384 ILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELM 463 (768)
T ss_dssp CCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGG
T ss_pred cChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHc
Confidence 7777766 6778888888888887788888888888888888887776544 35677888888888888888
Q ss_pred cCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccc--------cccCCccCCCCCccccccccCcEE
Q 047790 467 RLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLG--------YLSGNKLYGSVPTSFGNLNGLTHL 538 (885)
Q Consensus 467 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--------~ls~n~l~~~~p~~~~~l~~L~~L 538 (885)
.+++|++|++++|++++.+|..+.++++|+.|++++|+++|.+|..++ ++++|++++.+|..++.+++|+.|
T Consensus 464 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 543 (768)
T 3rgz_A 464 YVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWL 543 (768)
T ss_dssp GCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEE
T ss_pred CCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEE
Confidence 888888888888888877888888888888888888888887777655 356788887888888888888888
Q ss_pred EccCCCCC------------------------------------------------------------------------
Q 047790 539 DLSCNELD------------------------------------------------------------------------ 546 (885)
Q Consensus 539 ~Ls~N~l~------------------------------------------------------------------------ 546 (885)
+|++|+++
T Consensus 544 ~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~ 623 (768)
T 3rgz_A 544 DLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGH 623 (768)
T ss_dssp ECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEE
T ss_pred ECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceeccc
Confidence 88877654
Q ss_pred ---------CceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCC-ccc
Q 047790 547 ---------GIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRS-GIC 616 (885)
Q Consensus 547 ---------~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~-~~~ 616 (885)
.+..+++++|+++|.||.+++++++|++|+|++|+++|.||..++++++|++|||++|+++|.+|.. ..+
T Consensus 624 ~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l 703 (768)
T 3rgz_A 624 TSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSAL 703 (768)
T ss_dssp CCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGC
T ss_pred CchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCC
Confidence 2345888999999999999999999999999999999999999999999999999999999988865 677
Q ss_pred cccccccccCCccc
Q 047790 617 QNLSIISLTGNKDL 630 (885)
Q Consensus 617 ~~~~~~~~~~N~~~ 630 (885)
..++.+++++|+..
T Consensus 704 ~~L~~L~ls~N~l~ 717 (768)
T 3rgz_A 704 TMLTEIDLSNNNLS 717 (768)
T ss_dssp CCCSEEECCSSEEE
T ss_pred CCCCEEECcCCccc
Confidence 88999999999854
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=4e-61 Score=579.32 Aligned_cols=558 Identities=24% Similarity=0.243 Sum_probs=371.7
Q ss_pred cEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeee
Q 047790 65 RVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLR 144 (885)
Q Consensus 65 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 144 (885)
+++.|+++++.+++..+..+.++++|++|||++|.+++..|..|+++++|++|+|++|++++..+..|+.+++|++|+|+
T Consensus 26 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~ 105 (680)
T 1ziw_A 26 NITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLM 105 (680)
T ss_dssp TCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECC
T ss_pred CCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECC
Confidence 78999999999998777789999999999999999999999999999999999999999996666689999999999999
Q ss_pred ccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCccccc--ccccccEEEeecccCc
Q 047790 145 SNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLK--NLQSLSYLDVSNNLLS 222 (885)
Q Consensus 145 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--~l~~L~~L~Ls~N~l~ 222 (885)
+|++++..|..|+++++|++|+|++|++++..|..++++++|++|++++|++++ ++...+. .+++|++|++++|+++
T Consensus 106 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 106 SNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQA-LKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp SSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCC-BCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccc-cCHHHhhccccccccEEECCCCccc
Confidence 999998778899999999999999999999889999999999999999999984 5544344 4589999999999999
Q ss_pred ccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCC--CcEEEccCCCCcC
Q 047790 223 GNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGS--LVEINLDGNMLSG 300 (885)
Q Consensus 223 ~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~--L~~L~L~~N~l~~ 300 (885)
+..|..+..+++|+.+++..+...... ...++..+ ..++|+.|++++|++++..|..+..+.. |++|+|++|.+++
T Consensus 185 ~~~~~~~~~l~~L~~L~l~~~~l~~~~-~~~~~~~l-~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~ 262 (680)
T 1ziw_A 185 EFSPGCFHAIGRLFGLFLNNVQLGPSL-TEKLCLEL-ANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNV 262 (680)
T ss_dssp CBCTTGGGGSSEECEEECTTCCCHHHH-HHHHHHHH-TTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCE
T ss_pred ccChhhhhhhhhhhhhhccccccChhh-HHHHHHHh-hhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCc
Confidence 999999998888888777544322111 01111111 2345666666666666555555555433 6666666666665
Q ss_pred cccccccccCCcceeeccccccCCCCCcccCCC-CceeEEeecCcccc-----ccC----ccccCccccceeeccccccc
Q 047790 301 TIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFTG-----VIP----VSLWNSENLMEFNAASNLLE 370 (885)
Q Consensus 301 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~-----~~p----~~~~~l~~L~~L~l~~N~l~ 370 (885)
.++..|..+++|++|++++|++.+..|..+..+ .|++|++++|...+ .+| ..|..+++|++|++++|.+.
T Consensus 263 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~ 342 (680)
T 1ziw_A 263 VGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIP 342 (680)
T ss_dssp ECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBC
T ss_pred cCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccC
Confidence 555555666666666666666665555555554 45555555544332 111 14455555556666655555
Q ss_pred CCCcccccccccccEEEccCCcccc--cCccccccc--ccccceecccccccCcCCCccCCCCcccEEEcCCcccCccee
Q 047790 371 GSLSWEISNAVALEKLDLSSNMLTR--QIPKKIGNL--TNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVV 446 (885)
Q Consensus 371 ~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 446 (885)
+..+..|.++++|++|++++|.++. ..+..|..+ ++|+.|++++|+++++.|..|..+++|++|++++|++++.++
T Consensus 343 ~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 422 (680)
T 1ziw_A 343 GIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELT 422 (680)
T ss_dssp CCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECC
T ss_pred CCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccC
Confidence 5555555555555555555554321 112223222 355555555555555555555555555555555555543221
Q ss_pred ---------EEEEeecCCcccCCCchhcccCCCCCEEeccCcccc--CCCCCCcccccccceeeeccccceeccccccc-
Q 047790 447 ---------VVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLT--GSIPPEFGDSLKVQGLYLGHNQLTGSIPESLG- 514 (885)
Q Consensus 447 ---------~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~- 514 (885)
++.+++++|.+.+..+..+..+++|+.|++++|.++ +.+|..|..+++|+.|++++|++++..|..+.
T Consensus 423 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~ 502 (680)
T 1ziw_A 423 GQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEG 502 (680)
T ss_dssp SGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred cccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhcc
Confidence 234444444444444444444555555555555443 33444455555555555555554432211111
Q ss_pred -------cccCCccCCC--------CCccccccccCcEEEccCCCCCCceeeeecccccccccch-hccCcccccccccc
Q 047790 515 -------YLSGNKLYGS--------VPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPP-ELGNLVQLEYLDFS 578 (885)
Q Consensus 515 -------~ls~n~l~~~--------~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~-~~~~l~~L~~L~Ls 578 (885)
++++|++++. .+..|..+++|+.|+|+ +|+++ .+|. .|.++++|++|||+
T Consensus 503 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~-------------~N~l~-~i~~~~~~~l~~L~~L~Ls 568 (680)
T 1ziw_A 503 LEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLE-------------SNGFD-EIPVEVFKDLFELKIIDLG 568 (680)
T ss_dssp CTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECC-------------SSCCC-CCCTTTTTTCTTCCEEECC
T ss_pred ccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECC-------------CCCCC-CCCHHHcccccCcceeECC
Confidence 0112222111 11235556666666666 55555 5665 58999999999999
Q ss_pred cccCCCCCCccccCccccceeecccCcCCCCCCCCc--cccccccccccCCccccccccCCcccc-cccc
Q 047790 579 MNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSG--ICQNLSIISLTGNKDLCEKIMGSDCQI-LTFG 645 (885)
Q Consensus 579 ~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~~--~~~~~~~~~~~~N~~~c~~~~~~~c~~-~~~~ 645 (885)
+|++++..|..+..+++|++|++++|+|++.+|... .+.+++.+++.+|||.| +|.. .|+.
T Consensus 569 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c------~c~~~~~~~ 632 (680)
T 1ziw_A 569 LNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDC------TCESIAWFV 632 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCB------CCCCCSSEE
T ss_pred CCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCccc------CCccHHHHH
Confidence 999996556667899999999999999999777542 57889999999999999 8985 6654
No 4
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=6.4e-59 Score=552.58 Aligned_cols=500 Identities=25% Similarity=0.247 Sum_probs=390.9
Q ss_pred CCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEcc
Q 047790 89 SLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFS 168 (885)
Q Consensus 89 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 168 (885)
++++|||++|.+++..|..|+++++|++|+|++|++++..|..|+.+++|++|+|++|++++..|..|+++++|++|+++
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 113 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFI 113 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECT
T ss_pred cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeecc
Confidence 56777777777776666677777777777777777776666777777777777777777776666677777777777777
Q ss_pred CCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCccc--ceeccccccc
Q 047790 169 GNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLS--DLYLGIGPYQ 246 (885)
Q Consensus 169 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~--~L~l~~n~~~ 246 (885)
+|++++..|..|+++++|++|++++|+++ .++...+..+++|++|++++|++++..|..++.+++|+ .|+++.|..
T Consensus 114 ~n~i~~l~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l- 191 (606)
T 3t6q_A 114 QTGISSIDFIPLHNQKTLESLYLGSNHIS-SIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDI- 191 (606)
T ss_dssp TSCCSCGGGSCCTTCTTCCEEECCSSCCC-CCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCC-
T ss_pred ccCcccCCcchhccCCcccEEECCCCccc-ccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCcc-
Confidence 77777655666777777777777777776 33222234467777777777777766666677777776 555544432
Q ss_pred ccccccccCccccCCCCCcEEEecCCccc--------------------------ccccccccCCC--CCcEEEccCCCC
Q 047790 247 LSLFVGRITPEIGNCSMLKYISLSNNKLS--------------------------GPIPRELCNSG--SLVEINLDGNML 298 (885)
Q Consensus 247 ~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~--------------------------~~~p~~l~~l~--~L~~L~L~~N~l 298 (885)
..+++......+|+.|++++|... ...+..+..+. +|+.|++++|.+
T Consensus 192 -----~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l 266 (606)
T 3t6q_A 192 -----AGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYF 266 (606)
T ss_dssp -----CEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCC
T ss_pred -----CccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCcc
Confidence 123333333456666666665411 11122222222 789999999999
Q ss_pred cCcccccccccCCcceeeccccccCCCCCcccCCC-CceeEEeecCccccccCccccCccccceeecccccccCCCcc-c
Q 047790 299 SGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSW-E 376 (885)
Q Consensus 299 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~ 376 (885)
++.++..|..+++|++|++++|+++ .+|..+..+ .|++|++++|++++..|..+..+++|++|++++|.+.+.++. .
T Consensus 267 ~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~ 345 (606)
T 3t6q_A 267 FNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGC 345 (606)
T ss_dssp SSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSST
T ss_pred CccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhh
Confidence 9999999999999999999999998 567667666 799999999999999899999999999999999999866654 4
Q ss_pred ccccccccEEEccCCcccccC--cccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecC
Q 047790 377 ISNAVALEKLDLSSNMLTRQI--PKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNN 454 (885)
Q Consensus 377 ~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~ 454 (885)
+..+++|++|++++|++++.. |..+..+++|++|++++|.+++..|..|..+++|++|++++|+++
T Consensus 346 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~------------ 413 (606)
T 3t6q_A 346 LENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLK------------ 413 (606)
T ss_dssp TTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEE------------
T ss_pred hhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCC------------
Confidence 889999999999999998776 778999999999999999999888999999999999999999885
Q ss_pred CcccCCC-chhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccc
Q 047790 455 NMLSGKI-PGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLN 533 (885)
Q Consensus 455 n~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~ 533 (885)
+.. +..+..+++|+.|++++|.+++..|..+..+++|+.|++++|++++..+ ..+..+..++
T Consensus 414 ----~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-------------~~~~~~~~l~ 476 (606)
T 3t6q_A 414 ----VKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNI-------------QKTNSLQTLG 476 (606)
T ss_dssp ----CCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEE-------------CSSCGGGGCT
T ss_pred ----CcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCcccc-------------ccchhhccCC
Confidence 233 3458899999999999999999899999999999999999999986321 1256789999
Q ss_pred cCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCC
Q 047790 534 GLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRS 613 (885)
Q Consensus 534 ~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~ 613 (885)
+|+.|+|++|++ ++..|..++++++|++|+|++|++++.+|..+.+++.| +|++++|++++.+|..
T Consensus 477 ~L~~L~Ls~n~l-------------~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~ 542 (606)
T 3t6q_A 477 RLEILVLSFCDL-------------SSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSL 542 (606)
T ss_dssp TCCEEECTTSCC-------------CEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGG
T ss_pred CccEEECCCCcc-------------CccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhh
Confidence 999999995554 55668899999999999999999999999999999999 9999999999987764
Q ss_pred -ccccccccccccCCccccccccCCcccccccc
Q 047790 614 -GICQNLSIISLTGNKDLCEKIMGSDCQILTFG 645 (885)
Q Consensus 614 -~~~~~~~~~~~~~N~~~c~~~~~~~c~~~~~~ 645 (885)
..+.+++.+++.+||+.| +|...|+.
T Consensus 543 ~~~l~~L~~L~l~~N~~~c------~c~~~~~~ 569 (606)
T 3t6q_A 543 LPILSQQRTINLRQNPLDC------TCSNIYFL 569 (606)
T ss_dssp HHHHHTSSEEECTTCCEEC------SGGGHHHH
T ss_pred cccCCCCCEEeCCCCCccc------cCCcHHHH
Confidence 667889999999999999 89866543
No 5
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=9.6e-59 Score=550.65 Aligned_cols=487 Identities=18% Similarity=0.254 Sum_probs=344.2
Q ss_pred CCCHHHHHHHHHHHHhCCCCCC---------CCCCCCCCCCccc---CCccccCC-cEEEEEEecccccccccccccCCC
Q 047790 22 DEPKQERRSLVHFKNSLQNPQV---------LSGWNKTTRHCHW---FGVKCRHS-RVVSLVIQTQSLKGPVSPFLFNLS 88 (885)
Q Consensus 22 ~~~~~~~~aLl~~k~~~~~~~~---------~~~w~~~~~~c~w---~gv~c~~~-~v~~l~l~~~~l~g~~~~~l~~l~ 88 (885)
.....|++||.+||+++.++.+ ..+|+.++|||.| .||+|+.. ||++|+++++++.|.+|+++++|+
T Consensus 26 ~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~ 105 (636)
T 4eco_A 26 AEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLT 105 (636)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCT
T ss_pred hhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCc
Confidence 3455799999999999876432 3489989999999 99999765 999999999999999999999999
Q ss_pred CCCEEecCCCcc------cC------cCCcCccCcCCCCEEeccCCcCCCCCCccccc-cccccEeeee-----------
Q 047790 89 SLRILDLSKNLL------FG------QLSPQVSNLKRLKMLSVGENQLSGSIPSQLGL-LTRLETISLR----------- 144 (885)
Q Consensus 89 ~L~~L~Ls~n~l------~~------~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-l~~L~~L~Ls----------- 144 (885)
+|++|||++|.+ .+ .+|+.. +..|+ +++++|.+.+.+|..+.. +..+..+++.
T Consensus 106 ~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 182 (636)
T 4eco_A 106 ELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRIT 182 (636)
T ss_dssp TCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCC
T ss_pred cceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccc
Confidence 999999999976 33 344433 56677 888888888888877763 2333333333
Q ss_pred ---------ccCCCCCCCccccCCccCceEEccCCcCCcc-----------------CCcccC--CCCCCcccccccccc
Q 047790 145 ---------SNSFTGEMPSELGDIKQLKSLDFSGNGLNGT-----------------IPSRLG--DLTQLQDLDLSDNLL 196 (885)
Q Consensus 145 ---------~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~~L~~L~Ls~N~l 196 (885)
.|++++ +|.+++++++|++|+|++|++++. +|..++ ++++|++|+|++|++
T Consensus 183 l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l 261 (636)
T 4eco_A 183 LKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPN 261 (636)
T ss_dssp CCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTT
T ss_pred hhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcC
Confidence 455555 566666666666666666666653 555555 556666666666655
Q ss_pred CCCCCcccccccccccEEEeeccc-Ccc-cCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcc
Q 047790 197 SGSLPVSLLKNLQSLSYLDVSNNL-LSG-NIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKL 274 (885)
Q Consensus 197 ~~~~p~~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l 274 (885)
.+.+|.. +.++++|++|++++|+ ++| .+|..++++. .+..+++|++|++++|++
T Consensus 262 ~~~~p~~-l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~-----------------------~~~~l~~L~~L~L~~n~l 317 (636)
T 4eco_A 262 LTKLPTF-LKALPEMQLINVACNRGISGEQLKDDWQALA-----------------------DAPVGEKIQIIYIGYNNL 317 (636)
T ss_dssp CSSCCTT-TTTCSSCCEEECTTCTTSCHHHHHHHHHHHH-----------------------HSGGGGTCCEEECCSSCC
T ss_pred CccChHH-HhcCCCCCEEECcCCCCCccccchHHHHhhh-----------------------ccccCCCCCEEECCCCcC
Confidence 5555543 5555556666666555 554 4554444330 001125666666666666
Q ss_pred cccccc--cccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC-C-ceeEEeecCccccccC
Q 047790 275 SGPIPR--ELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-P-LKVFDLQYNNFTGVIP 350 (885)
Q Consensus 275 ~~~~p~--~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~-L~~L~Ls~N~l~~~~p 350 (885)
+ .+|. .+..+++|++|++++|+++|.+| .|..+++|++|++++|+++ .+|..+..+ . |++|++++|+++ .+|
T Consensus 318 ~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp 393 (636)
T 4eco_A 318 K-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIP 393 (636)
T ss_dssp S-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCC
T ss_pred C-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccc
Confidence 6 5565 66666666666666666665555 5666666666666666666 455555444 4 666666666666 455
Q ss_pred ccccCcc--ccceeecccccccCCCccccc-------ccccccEEEccCCcccccCcccccccccccceecccccccCcC
Q 047790 351 VSLWNSE--NLMEFNAASNLLEGSLSWEIS-------NAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGII 421 (885)
Q Consensus 351 ~~~~~l~--~L~~L~l~~N~l~~~~~~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 421 (885)
..+.... +|+.|++++|.+.+..|..+. .+++|++|+|++|+++...+..+..+++|+.|+|++|+++.+.
T Consensus 394 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~ 473 (636)
T 4eco_A 394 NIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIP 473 (636)
T ss_dssp SCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCC
T ss_pred hhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcC
Confidence 5555443 677777777777777666666 6678888888888888554555666888888888888888433
Q ss_pred CCccCCC-------CcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcc--cCCCCCEEeccCccccCCCCCCcccc
Q 047790 422 PMEFGDC-------ISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLS--RLTNLTTLNLFGNLLTGSIPPEFGDS 492 (885)
Q Consensus 422 p~~~~~l-------~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~--~l~~L~~L~Ls~N~l~~~~p~~~~~l 492 (885)
+..+... ++|++|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+
T Consensus 474 ~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-----------------~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l 535 (636)
T 4eco_A 474 KNSLKDENENFKNTYLLTSIDLRFNKLT-----------------KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNS 535 (636)
T ss_dssp SSSSEETTEECTTGGGCCEEECCSSCCC-----------------BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGC
T ss_pred HHHhccccccccccCCccEEECcCCcCC-----------------ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcC
Confidence 3333333 28889998888885 6777776 88999999999999987 88889999
Q ss_pred cccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccc
Q 047790 493 LKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQL 572 (885)
Q Consensus 493 ~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L 572 (885)
++|+.|+|++|+ ++++|++.+.+|..|+.+++|+.|+|++|+++ .||..+. ++|
T Consensus 536 ~~L~~L~Ls~N~----------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~--------------~ip~~~~--~~L 589 (636)
T 4eco_A 536 STLKGFGIRNQR----------DAQGNRTLREWPEGITLCPSLTQLQIGSNDIR--------------KVNEKIT--PNI 589 (636)
T ss_dssp SSCCEEECCSCB----------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCCC--------------BCCSCCC--TTC
T ss_pred CCCCEEECCCCc----------ccccCcccccChHHHhcCCCCCEEECCCCcCC--------------ccCHhHh--CcC
Confidence 999999998876 34677777888999999999999999966654 6777765 799
Q ss_pred cccccccccCCC
Q 047790 573 EYLDFSMNMLDG 584 (885)
Q Consensus 573 ~~L~Ls~N~l~~ 584 (885)
++|||++|++..
T Consensus 590 ~~L~Ls~N~l~~ 601 (636)
T 4eco_A 590 SVLDIKDNPNIS 601 (636)
T ss_dssp CEEECCSCTTCE
T ss_pred CEEECcCCCCcc
Confidence 999999998763
No 6
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-56 Score=549.39 Aligned_cols=520 Identities=23% Similarity=0.242 Sum_probs=394.3
Q ss_pred EEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCC-CccccccccccEeeeeccCC
Q 047790 70 VIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSI-PSQLGLLTRLETISLRSNSF 148 (885)
Q Consensus 70 ~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~N~l 148 (885)
+.++++++ .+|. -.++|++|||++|.+++..|..|+++++|++|+|++|.+.+.+ |..|+++++|++|+|++|.+
T Consensus 10 dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l 85 (844)
T 3j0a_A 10 FYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKI 85 (844)
T ss_dssp EESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCC
T ss_pred EccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcC
Confidence 44455555 3454 3467788888888887777778888888888888888655555 67778888888888888888
Q ss_pred CCCCCccccCCccCceEEccCCcCCccCCcc--cCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCC
Q 047790 149 TGEMPSELGDIKQLKSLDFSGNGLNGTIPSR--LGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIP 226 (885)
Q Consensus 149 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p 226 (885)
++..|.+|+++++|++|+|++|.+++.+|.. |.++++|++|+|++|.+++..+...|+++++|++|++++|.+++..|
T Consensus 86 ~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~ 165 (844)
T 3j0a_A 86 YFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCE 165 (844)
T ss_dssp CEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCS
T ss_pred cccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCH
Confidence 8777788888888888888888887655554 77888888888888888755454557778888888888888877777
Q ss_pred ccccCC--CcccceecccccccccccccccCccccCCCC------CcEEEecCCcccccccccccCC---CCCcEEEcc-
Q 047790 227 PEIGNL--KKLSDLYLGIGPYQLSLFVGRITPEIGNCSM------LKYISLSNNKLSGPIPRELCNS---GSLVEINLD- 294 (885)
Q Consensus 227 ~~~~~l--~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~------L~~L~Ls~N~l~~~~p~~l~~l---~~L~~L~L~- 294 (885)
..+..+ ++|+.|+++.|.. .+..|..++.+++ |++|++++|++++..|..+... .+++.+.++
T Consensus 166 ~~l~~l~~~~L~~L~L~~n~l-----~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~ 240 (844)
T 3j0a_A 166 HELEPLQGKTLSFFSLAANSL-----YSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAH 240 (844)
T ss_dssp GGGHHHHHCSSCCCEECCSBS-----CCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCS
T ss_pred HHcccccCCccceEECCCCcc-----ccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccc
Confidence 777776 7788888765543 3344555555444 8888888888887777766543 466777766
Q ss_pred --------CCCCcCccccccccc--CCcceeeccccccCCCCCcccCCC-CceeEEeecCccccccCccccCccccceee
Q 047790 295 --------GNMLSGTIEDVFDRC--TNLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFN 363 (885)
Q Consensus 295 --------~N~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 363 (885)
.+.+.+.....|.++ ++|+.|++++|.+.+..|..+..+ .|+.|+|++|++++..|..|..+++|++|+
T Consensus 241 ~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 320 (844)
T 3j0a_A 241 HIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLN 320 (844)
T ss_dssp SCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEE
T ss_pred ccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEE
Confidence 334444455555554 678888888888887777777776 688888888888888888888888888888
Q ss_pred cccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCc
Q 047790 364 AASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNG 443 (885)
Q Consensus 364 l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 443 (885)
+++|.+.+..+..|..+++|++|++++|++++..+..|..+++|+.|+|++|.++++ + .+++|+.|++++|+++.
T Consensus 321 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-~----~~~~L~~L~l~~N~l~~ 395 (844)
T 3j0a_A 321 LSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-H----FIPSIPDIFLSGNKLVT 395 (844)
T ss_dssp EESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-S----SCCSCSEEEEESCCCCC
T ss_pred CCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-c----CCCCcchhccCCCCccc
Confidence 888888888788888888888888888888877777788888888888888888743 2 26778888888888875
Q ss_pred cee----EEEEeecCCcccCC-CchhcccCCCCCEEeccCccccCCCCC-Ccccccccceeeeccccceecccccccccc
Q 047790 444 CVV----VVYLLLNNNMLSGK-IPGSLSRLTNLTTLNLFGNLLTGSIPP-EFGDSLKVQGLYLGHNQLTGSIPESLGYLS 517 (885)
Q Consensus 444 ~~~----~~~l~l~~n~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls 517 (885)
.+. ...+++++|.+++. .+..+.++++|+.|+|++|++++..+. .+..+++|+.|++++|.+++..+.
T Consensus 396 l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~------ 469 (844)
T 3j0a_A 396 LPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWET------ 469 (844)
T ss_dssp CCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCS------
T ss_pred ccccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCcccccccc------
Confidence 443 35677888888764 334567899999999999999965544 456688999999999999844321
Q ss_pred CCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccc
Q 047790 518 GNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLL 597 (885)
Q Consensus 518 ~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~ 597 (885)
+..|..|..+++|+.|+|+ +|++++..|..+.++++|++|+|++|+|++..|..+. ++|+
T Consensus 470 -----~~~~~~~~~l~~L~~L~Ls-------------~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~ 529 (844)
T 3j0a_A 470 -----ELCWDVFEGLSHLQVLYLN-------------HNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLE 529 (844)
T ss_dssp -----CCCSSCSSCBCCEECCCCC-------------HHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCC
T ss_pred -----ccchhhhcCcccccEEECC-------------CCcccccChhHccchhhhheeECCCCCCCccChhhhh--cccc
Confidence 2336778899999999999 5556666778889999999999999999976666555 8999
Q ss_pred eeecccCcCCCCCCCCccccccccccccCCcccc
Q 047790 598 YLNLADNRLEGEVPRSGICQNLSIISLTGNKDLC 631 (885)
Q Consensus 598 ~L~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c 631 (885)
+|++++|+|++.+|.. +.++..+++++|||.|
T Consensus 530 ~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C 561 (844)
T 3j0a_A 530 ILDISRNQLLAPNPDV--FVSLSVLDITHNKFIC 561 (844)
T ss_dssp EEEEEEECCCCCCSCC--CSSCCEEEEEEECCCC
T ss_pred EEECCCCcCCCCChhH--hCCcCEEEecCCCccc
Confidence 9999999999988854 5688899999999999
No 7
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=5.6e-57 Score=535.86 Aligned_cols=499 Identities=20% Similarity=0.193 Sum_probs=437.1
Q ss_pred cEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeee
Q 047790 65 RVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLR 144 (885)
Q Consensus 65 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 144 (885)
.++.|+++++.+++..|..+.++++|++|||++|.+++..|..|+++++|++|+|++|++++..|..|+.+++|++|+|+
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 113 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFI 113 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECT
T ss_pred cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeecc
Confidence 68899999999998878899999999999999999999999999999999999999999998889999999999999999
Q ss_pred ccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCccccccccccc--EEEeecccCc
Q 047790 145 SNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLS--YLDVSNNLLS 222 (885)
Q Consensus 145 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~--~L~Ls~N~l~ 222 (885)
+|++++..|..++.+++|++|++++|++++..+..+..+++|++|++++|+++ .++...++.+++|+ .|++++|+++
T Consensus 114 ~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~l~L~l~~n~l~ 192 (606)
T 3t6q_A 114 QTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIH-YLSKEDMSSLQQATNLSLNLNGNDIA 192 (606)
T ss_dssp TSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCC-EECHHHHHTTTTCCSEEEECTTCCCC
T ss_pred ccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCccc-ccChhhhhhhcccceeEEecCCCccC
Confidence 99999877888999999999999999999755455666999999999999998 56666689999999 8999999999
Q ss_pred ccCCccccCCCcccceeccccccccc--------------------ccccccC-ccccCCC--CCcEEEecCCccccccc
Q 047790 223 GNIPPEIGNLKKLSDLYLGIGPYQLS--------------------LFVGRIT-PEIGNCS--MLKYISLSNNKLSGPIP 279 (885)
Q Consensus 223 ~~~p~~~~~l~~L~~L~l~~n~~~~~--------------------~~~~~~~-~~l~~l~--~L~~L~Ls~N~l~~~~p 279 (885)
+..|..+.. .+|+.|+++.+..... .....++ ..+..+. +|+.|++++|++++..+
T Consensus 193 ~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~ 271 (606)
T 3t6q_A 193 GIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISS 271 (606)
T ss_dssp EECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCT
T ss_pred ccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCH
Confidence 877776654 6788888865531000 0000111 1122222 79999999999999888
Q ss_pred ccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC-CceeEEeecCccccccCc-cccCcc
Q 047790 280 RELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFTGVIPV-SLWNSE 357 (885)
Q Consensus 280 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~-~~~~l~ 357 (885)
..|..+++|++|++++|.++. +|..+..+++|++|++++|++++..|..+..+ .|++|++++|.+.+.+|. .+..++
T Consensus 272 ~~~~~l~~L~~L~l~~n~l~~-lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~ 350 (606)
T 3t6q_A 272 NTFHCFSGLQELDLTATHLSE-LPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLE 350 (606)
T ss_dssp TTTTTCTTCSEEECTTSCCSC-CCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCT
T ss_pred HHhccccCCCEEeccCCccCC-CChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccC
Confidence 889999999999999999994 56678999999999999999998888888777 799999999999976665 488999
Q ss_pred ccceeecccccccCCC--cccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCC-ccCCCCcccEE
Q 047790 358 NLMEFNAASNLLEGSL--SWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPM-EFGDCISLNTL 434 (885)
Q Consensus 358 ~L~~L~l~~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L 434 (885)
+|++|++++|.+.+.. +..+..+++|++|++++|++++..|..|..+++|+.|++++|++++..|. .+..+++|++|
T Consensus 351 ~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 430 (606)
T 3t6q_A 351 NLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVL 430 (606)
T ss_dssp TCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEE
T ss_pred cCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEE
Confidence 9999999999999876 77899999999999999999999999999999999999999999987665 49999999999
Q ss_pred EcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCC---CCCCcccccccceeeeccccceecccc
Q 047790 435 DLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGS---IPPEFGDSLKVQGLYLGHNQLTGSIPE 511 (885)
Q Consensus 435 ~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 511 (885)
++++|.++ +..|..+..+++|++|++++|++++. .+..+..+++|+.|++++|++++..
T Consensus 431 ~l~~n~l~----------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-- 492 (606)
T 3t6q_A 431 NLSHSLLD----------------ISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSID-- 492 (606)
T ss_dssp ECTTCCCB----------------TTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEEC--
T ss_pred ECCCCccC----------------CcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccC--
Confidence 99999884 46688899999999999999999873 3467899999999999999999755
Q ss_pred ccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCcccc
Q 047790 512 SLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLC 591 (885)
Q Consensus 512 ~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~ 591 (885)
|..|+.+++|+.|+|++ |++++.+|..+.++++| +|+|++|++++.+|..+.
T Consensus 493 --------------~~~~~~l~~L~~L~Ls~-------------N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~ 544 (606)
T 3t6q_A 493 --------------QHAFTSLKMMNHVDLSH-------------NRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLP 544 (606)
T ss_dssp --------------TTTTTTCTTCCEEECCS-------------SCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHH
T ss_pred --------------hhhhccccCCCEEECCC-------------CccCcCChhHhCccccc-EEECcCCcccccCHhhcc
Confidence 78899999999999995 45556788999999999 999999999988888899
Q ss_pred CccccceeecccCcCCCCCCC
Q 047790 592 SLPYLLYLNLADNRLEGEVPR 612 (885)
Q Consensus 592 ~l~~L~~L~l~~N~l~~~~p~ 612 (885)
.+++|++|++++|++.+..+.
T Consensus 545 ~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 545 ILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp HHHTSSEEECTTCCEECSGGG
T ss_pred cCCCCCEEeCCCCCccccCCc
Confidence 999999999999999987664
No 8
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=7e-57 Score=535.02 Aligned_cols=492 Identities=22% Similarity=0.186 Sum_probs=346.3
Q ss_pred CCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEc
Q 047790 88 SSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDF 167 (885)
Q Consensus 88 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 167 (885)
++|++|||++|.+++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|.+++..|.+|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 45555555555555555555555555555555555555544555555555555555555555544555555555555555
Q ss_pred cCCcCCccCCcccCCCCCCccccccccccCC-CCCcccccccccccEEEeecccCcccCCccccCCCccc----ceeccc
Q 047790 168 SGNGLNGTIPSRLGDLTQLQDLDLSDNLLSG-SLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLS----DLYLGI 242 (885)
Q Consensus 168 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~l~~ 242 (885)
++|++++..|..|+++++|++|++++|++++ .+|.. ++++++|++|++++|++++..|..++.+++|+ +++++.
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~-~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~ 190 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAY-FSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSL 190 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGG-GGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTT
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHh-HhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccC
Confidence 5555554444555555555555555555542 33433 55555555555555555555555555544443 355543
Q ss_pred ccccccccccccCccccCCCCCcEEEecCCccc-ccccccccCCCCCcE-------------------------------
Q 047790 243 GPYQLSLFVGRITPEIGNCSMLKYISLSNNKLS-GPIPRELCNSGSLVE------------------------------- 290 (885)
Q Consensus 243 n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~------------------------------- 290 (885)
|.. ..+++......+|++|++++|.++ +..|..+..+++++.
T Consensus 191 n~l------~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~ 264 (606)
T 3vq2_A 191 NPI------DFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTID 264 (606)
T ss_dssp CCC------CEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEE
T ss_pred CCc------ceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHh
Confidence 331 123333333335555555555554 233444444444444
Q ss_pred -EEc-cCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC-CceeEEeecCccccccCccccCccccceeecccc
Q 047790 291 -INL-DGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASN 367 (885)
Q Consensus 291 -L~L-~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 367 (885)
+++ ..|.+++..+. +..+++|+.|++++|.+.. +| .+... .|+.|++++|++ +.+| .+ .+++|++|++++|
T Consensus 265 ~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n 338 (606)
T 3vq2_A 265 EFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMN 338 (606)
T ss_dssp EEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESC
T ss_pred heeccccccccccccc-cccCCCCCEEEecCccchh-hh-hccccccCCEEEcccccC-cccc-cC-CCCccceeeccCC
Confidence 444 67777777776 8888999999999998864 45 45554 789999999999 5666 44 8889999999998
Q ss_pred cccCCCcccccccccccEEEccCCccccc--CcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcce
Q 047790 368 LLEGSLSWEISNAVALEKLDLSSNMLTRQ--IPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCV 445 (885)
Q Consensus 368 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 445 (885)
...+.. .+..+++|++|++++|++++. .|..+..+++|++|++++|.+++ +|..+..+++|++|++++|++.
T Consensus 339 ~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~--- 412 (606)
T 3vq2_A 339 KGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLK--- 412 (606)
T ss_dssp SSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEE---
T ss_pred cCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccC---
Confidence 655433 567888999999999998876 37888889999999999999885 5688888999999999888875
Q ss_pred eEEEEeecCCcccCCCc-hhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCC
Q 047790 446 VVVYLLLNNNMLSGKIP-GSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGS 524 (885)
Q Consensus 446 ~~~~l~l~~n~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~ 524 (885)
+..| ..+..+++|+.|++++|++++..|..+..+++|+.|++++|++++.+
T Consensus 413 -------------~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--------------- 464 (606)
T 3vq2_A 413 -------------RVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNT--------------- 464 (606)
T ss_dssp -------------STTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGE---------------
T ss_pred -------------CccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcc---------------
Confidence 3445 67889999999999999999999999999999999999999998632
Q ss_pred CCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccC
Q 047790 525 VPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADN 604 (885)
Q Consensus 525 ~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N 604 (885)
+|..|+.+++|+.|+|++|+ +++.+|..++++++|++|+|++|++++.+|..+..+++|++|++++|
T Consensus 465 ~~~~~~~l~~L~~L~Ls~n~-------------l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 531 (606)
T 3vq2_A 465 LSNVFANTTNLTFLDLSKCQ-------------LEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFN 531 (606)
T ss_dssp ECSCCTTCTTCCEEECTTSC-------------CCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTS
T ss_pred hHHhhccCCCCCEEECCCCc-------------CCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCC
Confidence 27889999999999999554 45567888999999999999999999988999999999999999999
Q ss_pred cCCCCCCCCcccc-ccccccccCCccccccccCCcccccccc
Q 047790 605 RLEGEVPRSGICQ-NLSIISLTGNKDLCEKIMGSDCQILTFG 645 (885)
Q Consensus 605 ~l~~~~p~~~~~~-~~~~~~~~~N~~~c~~~~~~~c~~~~~~ 645 (885)
+++..++....+. +++.+++++||+.| +|...|+.
T Consensus 532 ~l~~~p~~~~~l~~~L~~l~l~~N~~~c------~c~~~~~~ 567 (606)
T 3vq2_A 532 RIETSKGILQHFPKSLAFFNLTNNSVAC------ICEHQKFL 567 (606)
T ss_dssp CCCCEESCGGGSCTTCCEEECCSCCCCC------SSTTHHHH
T ss_pred cCcccCHhHhhhcccCcEEEccCCCccc------CCccHHHH
Confidence 9997655555554 58999999999999 88876543
No 9
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.5e-57 Score=544.80 Aligned_cols=480 Identities=18% Similarity=0.239 Sum_probs=368.9
Q ss_pred cCCCCHHHHHHHHHHHHhCCCCCCCCCCCCCC-----CC--ccc------------CCccccC-CcEEEEEEeccccccc
Q 047790 20 AIDEPKQERRSLVHFKNSLQNPQVLSGWNKTT-----RH--CHW------------FGVKCRH-SRVVSLVIQTQSLKGP 79 (885)
Q Consensus 20 ~~~~~~~~~~aLl~~k~~~~~~~~~~~w~~~~-----~~--c~w------------~gv~c~~-~~v~~l~l~~~~l~g~ 79 (885)
.+.+..+|++||++||+++.++ +|+.+. +| |.| .||+|+. .||++|+|+++++.|.
T Consensus 263 ~~~~~~~d~~ALl~~k~~l~~~----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ 338 (876)
T 4ecn_A 263 ETAEYIKDYKALKAIWEALDGK----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGR 338 (876)
T ss_dssp CCCHHHHHHHHHHHHHHHTTGG----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEE
T ss_pred ccccchHHHHHHHHHHHHcCCC----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCc
Confidence 3456678999999999999776 786443 55 999 9999985 6999999999999999
Q ss_pred ccccccCCCCCCEEec-CCCcccCcCCcCc--------------------------------------------------
Q 047790 80 VSPFLFNLSSLRILDL-SKNLLFGQLSPQV-------------------------------------------------- 108 (885)
Q Consensus 80 ~~~~l~~l~~L~~L~L-s~n~l~~~~~~~~-------------------------------------------------- 108 (885)
+|+++++|++|++||| ++|.++|..|...
T Consensus 339 ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~ 418 (876)
T 4ecn_A 339 VPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIK 418 (876)
T ss_dssp ECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCC
T ss_pred CchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccc
Confidence 9999999999999999 8998877643221
Q ss_pred -cCcCCCCEEeccC--CcCCCCCCccccccccccEeeeeccCCCC-----------------CCCcccc--CCccCceEE
Q 047790 109 -SNLKRLKMLSVGE--NQLSGSIPSQLGLLTRLETISLRSNSFTG-----------------EMPSELG--DIKQLKSLD 166 (885)
Q Consensus 109 -~~l~~L~~L~L~~--n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~l~--~l~~L~~L~ 166 (885)
.....++.+.++. |++++ +|..|+++++|++|+|++|++++ .+|..++ ++++|++|+
T Consensus 419 ~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~ 497 (876)
T 4ecn_A 419 KDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVE 497 (876)
T ss_dssp CCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEE
T ss_pred cccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEE
Confidence 1122344444444 78887 89899999999999999999997 3888877 899999999
Q ss_pred ccCCcCCccCCcccCCCCCCccccccccc-cCC-CCCcccccccc-------cccEEEeecccCcccCCc--cccCCCcc
Q 047790 167 FSGNGLNGTIPSRLGDLTQLQDLDLSDNL-LSG-SLPVSLLKNLQ-------SLSYLDVSNNLLSGNIPP--EIGNLKKL 235 (885)
Q Consensus 167 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~~l~-------~L~~L~Ls~N~l~~~~p~--~~~~l~~L 235 (885)
|++|++.+.+|..|+++++|++|+|++|+ ++| .+|.. +..++ +|++|++++|+++ .+|. .++++++|
T Consensus 498 Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~-i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L 575 (876)
T 4ecn_A 498 LYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKAD-WTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKL 575 (876)
T ss_dssp EESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHH-HHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTC
T ss_pred CcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHH-HHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCC
Confidence 99999888999889999999999999998 887 67765 44444 8999999999998 7888 88888888
Q ss_pred cceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCC-CcEEEccCCCCcCcccccccccCC--c
Q 047790 236 SDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGS-LVEINLDGNMLSGTIEDVFDRCTN--L 312 (885)
Q Consensus 236 ~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~--L 312 (885)
+.|+++.|... .+| .++.+++|+.|+|++|+++ .+|..+..+++ |+.|+|++|.++ .+|..+..++. |
T Consensus 576 ~~L~Ls~N~l~------~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L 646 (876)
T 4ecn_A 576 GLLDCVHNKVR------HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVM 646 (876)
T ss_dssp CEEECTTSCCC------BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCE
T ss_pred CEEECCCCCcc------cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCC
Confidence 88888666522 566 7888888888888888888 78888888888 888888888888 45566666544 8
Q ss_pred ceeeccccccCCCCCccc------CCCCceeEEeecCccccccCccccCccccceeecccccccCCCcccccc-------
Q 047790 313 SELVLVNNRISGSIPEYI------SELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISN------- 379 (885)
Q Consensus 313 ~~L~Ls~N~l~~~~p~~~------~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~------- 379 (885)
+.|+|++|++.+.+|... ...+|+.|++++|+++...+..+..+++|+.|++++|++....+..+..
T Consensus 647 ~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~n 726 (876)
T 4ecn_A 647 GSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKN 726 (876)
T ss_dssp EEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTT
T ss_pred CEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccc
Confidence 888888888887766543 2225888888888888443334447788888888888887444333332
Q ss_pred cccccEEEccCCcccccCccccc--ccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcc
Q 047790 380 AVALEKLDLSSNMLTRQIPKKIG--NLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNML 457 (885)
Q Consensus 380 l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l 457 (885)
+++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+|++|+ ++++|.+
T Consensus 727 l~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~----------~ls~N~l 794 (876)
T 4ecn_A 727 TYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR----------DAEGNRI 794 (876)
T ss_dssp GGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCB----------CTTCCBC
T ss_pred cCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCC----------Ccccccc
Confidence 237888888888887 5677776 78888888888888886 67777888888888888876 3566777
Q ss_pred cCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcE
Q 047790 458 SGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTH 537 (885)
Q Consensus 458 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~ 537 (885)
.+.+|..+..+++|+.|+|++|++ +.+|..+. ++|+.|+|++|++...- +..|.....+..
T Consensus 795 ~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~----------------~~~~~~~~~~~~ 855 (876)
T 4ecn_A 795 LRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISID----------------VTSVCPYIEAGM 855 (876)
T ss_dssp CCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEE----------------CGGGHHHHHTTC
T ss_pred cccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccC----------------hHHccccccchh
Confidence 777888888888888888888888 57777765 47788888888776332 344555555566
Q ss_pred EEccCCCCC
Q 047790 538 LDLSCNELD 546 (885)
Q Consensus 538 L~Ls~N~l~ 546 (885)
+.|++|++.
T Consensus 856 ~~L~~n~~~ 864 (876)
T 4ecn_A 856 YVLLYDKTQ 864 (876)
T ss_dssp CEEECCTTS
T ss_pred eeecCCCcc
Confidence 666655544
No 10
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=5.1e-55 Score=526.12 Aligned_cols=546 Identities=23% Similarity=0.201 Sum_probs=446.8
Q ss_pred EEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCC
Q 047790 69 LVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSF 148 (885)
Q Consensus 69 l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 148 (885)
++.++++++ .+|..+. +++++|||++|.+++..+..|+++++|++|+|++|.+++..|..|+.+++|++|+|++|.+
T Consensus 9 ~~cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 85 (680)
T 1ziw_A 9 ADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNEL 85 (680)
T ss_dssp EECCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCC
T ss_pred eECCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCcc
Confidence 344445554 4666554 7899999999999988888899999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCcc
Q 047790 149 TGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPE 228 (885)
Q Consensus 149 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 228 (885)
++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|.+++..| ..+.++++|++|++++|++++..+..
T Consensus 86 ~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~ 164 (680)
T 1ziw_A 86 SQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKL-GTQVQLENLQELLLSNNKIQALKSEE 164 (680)
T ss_dssp CCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCC-CSSSCCTTCCEEECCSSCCCCBCHHH
T ss_pred CccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCc-hhhcccccCCEEEccCCcccccCHHH
Confidence 96666689999999999999999998888899999999999999999995444 45889999999999999999877776
Q ss_pred cc--CCCcccceecccccccccccccccCccccCCCCCcEEEecCCccccccccccc---CCCCCcEEEccCCCCcCccc
Q 047790 229 IG--NLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELC---NSGSLVEINLDGNMLSGTIE 303 (885)
Q Consensus 229 ~~--~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~---~l~~L~~L~L~~N~l~~~~~ 303 (885)
+. .+++|+.|+++.|.. .+..|..+..+++|+.|++++|.+.+.....++ ..++|+.|++++|.+++..+
T Consensus 165 ~~~~~~~~L~~L~L~~n~l-----~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~ 239 (680)
T 1ziw_A 165 LDIFANSSLKKLELSSNQI-----KEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSN 239 (680)
T ss_dssp HGGGTTCEESEEECTTCCC-----CCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECT
T ss_pred hhccccccccEEECCCCcc-----cccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccCh
Confidence 54 568999999976643 344566788899999999999988754333322 35789999999999999999
Q ss_pred ccccccCC--cceeeccccccCCCCCcccCCC-CceeEEeecCccccccCccccCccccceeecccccccC-----CCc-
Q 047790 304 DVFDRCTN--LSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEG-----SLS- 374 (885)
Q Consensus 304 ~~~~~l~~--L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-----~~~- 374 (885)
..|..++. |++|++++|++++..|..+..+ .|++|++++|++++..|..|..+++|+.|++++|...+ .+|
T Consensus 240 ~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~ 319 (680)
T 1ziw_A 240 TTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPK 319 (680)
T ss_dssp TTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCE
T ss_pred hHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccc
Confidence 99988755 9999999999998888888877 79999999999999999999999999999999876553 222
Q ss_pred ---ccccccccccEEEccCCcccccCcccccccccccceecccccccCc--CCCccCCC--CcccEEEcCCcccCccee-
Q 047790 375 ---WEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGI--IPMEFGDC--ISLNTLDLGSNNLNGCVV- 446 (885)
Q Consensus 375 ---~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l--~~L~~L~Ls~N~l~~~~~- 446 (885)
..|..+++|++|++++|++++..|..|..+++|++|++++|.++.. .+..|..+ ++|+.|++++|++++..+
T Consensus 320 i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~ 399 (680)
T 1ziw_A 320 IDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESD 399 (680)
T ss_dssp ECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTT
T ss_pred cChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChh
Confidence 3688899999999999999998889999999999999999986432 33344443 589999999999876543
Q ss_pred -------EEEEeecCCcccCCCc-hhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccce--eccccccc--
Q 047790 447 -------VVYLLLNNNMLSGKIP-GSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLT--GSIPESLG-- 514 (885)
Q Consensus 447 -------~~~l~l~~n~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--g~~p~~~~-- 514 (885)
++.|++++|.+++.+| ..+.++++|++|++++|++++..+..|..+++|+.|++++|+++ +.+|..+.
T Consensus 400 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l 479 (680)
T 1ziw_A 400 AFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPL 479 (680)
T ss_dssp TTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTC
T ss_pred hhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccC
Confidence 4678888888887666 67888888999999999888888888888888999999988887 45565444
Q ss_pred ------cccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCc
Q 047790 515 ------YLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPE 588 (885)
Q Consensus 515 ------~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~ 588 (885)
++++|++++..|..|..+++|+.|+|++|+++.+. ...+.+..+..++++++|++|+|++|+++ .+|.
T Consensus 480 ~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~-----~~~~~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~ 553 (680)
T 1ziw_A 480 RNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLW-----KHANPGGPIYFLKGLSHLHILNLESNGFD-EIPV 553 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGG-----STTSTTSCCCTTTTCTTCCEEECCSSCCC-CCCT
T ss_pred CCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccc-----hhhccCCcchhhcCCCCCCEEECCCCCCC-CCCH
Confidence 35677777766677777777777877777766442 11111222345889999999999999999 5665
Q ss_pred -cccCccccceeecccCcCCCCCCCC-ccccccccccccCCcc
Q 047790 589 -KLCSLPYLLYLNLADNRLEGEVPRS-GICQNLSIISLTGNKD 629 (885)
Q Consensus 589 -~l~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~N~~ 629 (885)
.+..+++|++|++++|+|++.++.. ..+.+++.+++++|..
T Consensus 554 ~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l 596 (680)
T 1ziw_A 554 EVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLI 596 (680)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred HHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcC
Confidence 5899999999999999999876654 5678899999999964
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=5.5e-55 Score=518.76 Aligned_cols=489 Identities=22% Similarity=0.216 Sum_probs=429.0
Q ss_pred cEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeee
Q 047790 65 RVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLR 144 (885)
Q Consensus 65 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 144 (885)
+++.++++++.+++..+..+.++++|++|||++|.+++..|..|+++++|++|+|++|++++..|..|+.+++|++|+|+
T Consensus 33 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 112 (606)
T 3vq2_A 33 STKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAV 112 (606)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECT
T ss_pred CcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEcc
Confidence 78999999999998877899999999999999999999889999999999999999999998889999999999999999
Q ss_pred ccCCCCCCCccccCCccCceEEccCCcCCc-cCCcccCCCCCCccccccccccCCCCCccccccccccc----EEEeecc
Q 047790 145 SNSFTGEMPSELGDIKQLKSLDFSGNGLNG-TIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLS----YLDVSNN 219 (885)
Q Consensus 145 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~----~L~Ls~N 219 (885)
+|.+++..|..++++++|++|++++|++++ .+|..|+++++|++|++++|+++ .++...++.+++|+ +|++++|
T Consensus 113 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 113 ETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQ-TITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCC-EECTTTTHHHHHCTTCCCEEECTTC
T ss_pred CCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcce-ecChhhhhhhhccccccceeeccCC
Confidence 999998887899999999999999999986 57999999999999999999998 45555577777765 8999999
Q ss_pred cCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEe------------------------------
Q 047790 220 LLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISL------------------------------ 269 (885)
Q Consensus 220 ~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~L------------------------------ 269 (885)
++++..+..+... +|+.|+++.|... .+.+|..+.+++.|+.+++
T Consensus 192 ~l~~~~~~~~~~~-~L~~L~L~~n~~~----~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l 266 (606)
T 3vq2_A 192 PIDFIQDQAFQGI-KLHELTLRGNFNS----SNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEF 266 (606)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSC----HHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEE
T ss_pred CcceeCcccccCc-eeeeeeccCCccc----hhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhhe
Confidence 9996665555544 8999999766432 1334455566666665555
Q ss_pred ---cCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccc
Q 047790 270 ---SNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFT 346 (885)
Q Consensus 270 ---s~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~ 346 (885)
..|.+++.+|. +..+++|+.|++++|.++..+ .+..+++|++|++++|++ +.+|.. ....|+.|++++|+..
T Consensus 267 ~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l~--~l~~~~~L~~L~l~~n~l-~~lp~~-~l~~L~~L~l~~n~~~ 341 (606)
T 3vq2_A 267 RLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKYLE--DVPKHFKWQSLSIIRCQL-KQFPTL-DLPFLKSLTLTMNKGS 341 (606)
T ss_dssp EECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCCCC--CCCTTCCCSEEEEESCCC-SSCCCC-CCSSCCEEEEESCSSC
T ss_pred eccccccccccccc-cccCCCCCEEEecCccchhhh--hccccccCCEEEcccccC-cccccC-CCCccceeeccCCcCc
Confidence 67788888887 899999999999999998765 788999999999999999 677855 3348999999999766
Q ss_pred cccCccccCccccceeecccccccCC--CcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCC-C
Q 047790 347 GVIPVSLWNSENLMEFNAASNLLEGS--LSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIP-M 423 (885)
Q Consensus 347 ~~~p~~~~~l~~L~~L~l~~N~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~ 423 (885)
+.. .+..+++|++|++++|.+++. .+..+..+++|++|++++|++++ +|..+..+++|+.|++++|++++..| .
T Consensus 342 ~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 418 (606)
T 3vq2_A 342 ISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFS 418 (606)
T ss_dssp EEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTT
T ss_pred cch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChh
Confidence 544 677899999999999999977 48889999999999999999986 66899999999999999999998888 7
Q ss_pred ccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccC-CCCCCcccccccceeeecc
Q 047790 424 EFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTG-SIPPEFGDSLKVQGLYLGH 502 (885)
Q Consensus 424 ~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~ 502 (885)
.+..+++|++|++++|+++ +..|..+..+++|++|++++|++++ .+|..|..+++|+.|++++
T Consensus 419 ~~~~l~~L~~L~l~~n~l~----------------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~ 482 (606)
T 3vq2_A 419 AFLSLEKLLYLDISYTNTK----------------IDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSK 482 (606)
T ss_dssp TTTTCTTCCEEECTTSCCE----------------ECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred hhhccccCCEEECcCCCCC----------------ccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCC
Confidence 8999999999999999884 4678889999999999999999998 4799999999999999999
Q ss_pred ccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccC
Q 047790 503 NQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNML 582 (885)
Q Consensus 503 N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l 582 (885)
|++++.+ |..|+.+++|+.|+|++|++ ++.+|..++++++|++|||++|++
T Consensus 483 n~l~~~~----------------~~~~~~l~~L~~L~Ls~N~l-------------~~~~~~~~~~l~~L~~L~l~~N~l 533 (606)
T 3vq2_A 483 CQLEQIS----------------WGVFDTLHRLQLLNMSHNNL-------------LFLDSSHYNQLYSLSTLDCSFNRI 533 (606)
T ss_dssp SCCCEEC----------------TTTTTTCTTCCEEECCSSCC-------------SCEEGGGTTTCTTCCEEECTTSCC
T ss_pred CcCCccC----------------hhhhcccccCCEEECCCCcC-------------CCcCHHHccCCCcCCEEECCCCcC
Confidence 9999755 77899999999999995554 556789999999999999999999
Q ss_pred CCCCCccccCcc-ccceeecccCcCCCCCCCC
Q 047790 583 DGHIPEKLCSLP-YLLYLNLADNRLEGEVPRS 613 (885)
Q Consensus 583 ~~~ip~~l~~l~-~L~~L~l~~N~l~~~~p~~ 613 (885)
+ .+|..+..++ +|++|++++|++.+..+..
T Consensus 534 ~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~ 564 (606)
T 3vq2_A 534 E-TSKGILQHFPKSLAFFNLTNNSVACICEHQ 564 (606)
T ss_dssp C-CEESCGGGSCTTCCEEECCSCCCCCSSTTH
T ss_pred c-ccCHhHhhhcccCcEEEccCCCcccCCccH
Confidence 9 7898899997 5999999999999877654
No 12
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-53 Score=519.80 Aligned_cols=511 Identities=23% Similarity=0.265 Sum_probs=399.9
Q ss_pred cccCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcC-CcCccCcCCCCEEeccCCcCCCCCCccc
Q 047790 54 CHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQL-SPQVSNLKRLKMLSVGENQLSGSIPSQL 132 (885)
Q Consensus 54 c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~p~~~ 132 (885)
|.|..|.+-..+++.|+++++.+++..+..+.++++|++|||++|...+.+ |..|+++++|++|+|++|.+++..|..|
T Consensus 14 ~~L~~vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~ 93 (844)
T 3j0a_A 14 CNLTQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAF 93 (844)
T ss_dssp CCSSCCCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSS
T ss_pred CCCCCCCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHc
Confidence 568888884458999999999999888899999999999999999776666 7789999999999999999999899999
Q ss_pred cccccccEeeeeccCCCCCCCcc--ccCCccCceEEccCCcCCccCC-cccCCCCCCccccccccccCCCCCccccccc-
Q 047790 133 GLLTRLETISLRSNSFTGEMPSE--LGDIKQLKSLDFSGNGLNGTIP-SRLGDLTQLQDLDLSDNLLSGSLPVSLLKNL- 208 (885)
Q Consensus 133 ~~l~~L~~L~Ls~N~l~~~~p~~--l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l- 208 (885)
+.+++|++|+|++|.+++.+|.. |+++++|++|+|++|++++..+ ..|+++++|++|+|++|.+++..|.. +..+
T Consensus 94 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~-l~~l~ 172 (844)
T 3j0a_A 94 QGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHE-LEPLQ 172 (844)
T ss_dssp CSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGG-GHHHH
T ss_pred cCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHH-ccccc
Confidence 99999999999999999877665 9999999999999999997655 57999999999999999999665554 7777
Q ss_pred -ccccEEEeecccCcccCCccccCCCc------ccceecccccccccccccccCccccC---CCCCcEEEec--------
Q 047790 209 -QSLSYLDVSNNLLSGNIPPEIGNLKK------LSDLYLGIGPYQLSLFVGRITPEIGN---CSMLKYISLS-------- 270 (885)
Q Consensus 209 -~~L~~L~Ls~N~l~~~~p~~~~~l~~------L~~L~l~~n~~~~~~~~~~~~~~l~~---l~~L~~L~Ls-------- 270 (885)
++|+.|++++|.+++..|..++.+.+ |+.|+++.|... +.++..+.. .+.++.|.++
T Consensus 173 ~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~-----~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~ 247 (844)
T 3j0a_A 173 GKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWT-----VDITGNFSNAISKSQAFSLILAHHIMGAGF 247 (844)
T ss_dssp HCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSS-----TTTTSGGGGTSCSCCBSEEECCSSCCBCSS
T ss_pred CCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCc-----hhHHHHHHhhcCcccccceecccccccccc
Confidence 89999999999999999988887766 999999776432 333333332 2456666665
Q ss_pred -CCcccccccccccCC--CCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC-CceeEEeecCccc
Q 047790 271 -NNKLSGPIPRELCNS--GSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFT 346 (885)
Q Consensus 271 -~N~l~~~~p~~l~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~ 346 (885)
.+++.+..+..+..+ ++|+.|+|++|.+++..+..|..+++|+.|+|++|++++..|..+..+ .|++|++++|+++
T Consensus 248 ~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~ 327 (844)
T 3j0a_A 248 GFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLG 327 (844)
T ss_dssp SCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCS
T ss_pred cccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCC
Confidence 233333334444443 567777777777777777777777777777777777777777666666 5777777777777
Q ss_pred cccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccC
Q 047790 347 GVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFG 426 (885)
Q Consensus 347 ~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 426 (885)
+..|..|..+++|+.|++++|.+.+..+..|..+++|++|+|++|.+++. ..+++|+.|++++|+++. +|..
T Consensus 328 ~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~~-l~~~-- 399 (844)
T 3j0a_A 328 ELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLVT-LPKI-- 399 (844)
T ss_dssp CCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCCC-CCCC--
T ss_pred ccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCccc-cccc--
Confidence 77777777777777777777777777777777777777777777777642 226677777777777773 4433
Q ss_pred CCCcccEEEcCCcccCcc---------eeEEEEeecCCcccCCCch-hcccCCCCCEEeccCcccc-----CCCCCCccc
Q 047790 427 DCISLNTLDLGSNNLNGC---------VVVVYLLLNNNMLSGKIPG-SLSRLTNLTTLNLFGNLLT-----GSIPPEFGD 491 (885)
Q Consensus 427 ~l~~L~~L~Ls~N~l~~~---------~~~~~l~l~~n~l~~~~p~-~l~~l~~L~~L~Ls~N~l~-----~~~p~~~~~ 491 (885)
..+++.|++++|++++. ..++.|++++|.+++..+. .+..+++|+.|+|++|.++ +..|..|.+
T Consensus 400 -~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~ 478 (844)
T 3j0a_A 400 -NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEG 478 (844)
T ss_dssp -CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSC
T ss_pred -ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcC
Confidence 34567777777776643 2345677777777765443 4566899999999999997 445577899
Q ss_pred ccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCccc
Q 047790 492 SLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQ 571 (885)
Q Consensus 492 l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~ 571 (885)
+++|+.|+|++|++++.+ |..|..+++|+.|+|++|+++++ .|..+. ++
T Consensus 479 l~~L~~L~Ls~N~l~~~~----------------~~~~~~l~~L~~L~Ls~N~l~~l-------------~~~~~~--~~ 527 (844)
T 3j0a_A 479 LSHLQVLYLNHNYLNSLP----------------PGVFSHLTALRGLSLNSNRLTVL-------------SHNDLP--AN 527 (844)
T ss_dssp BCCEECCCCCHHHHTTCC----------------TTSSSSCCSCSEEEEESCCCSSC-------------CCCCCC--SC
T ss_pred cccccEEECCCCcccccC----------------hhHccchhhhheeECCCCCCCcc-------------Chhhhh--cc
Confidence 999999999999999644 77899999999999997776633 233333 89
Q ss_pred ccccccccccCCCCCCccccCccccceeecccCcCCCCCCCC
Q 047790 572 LEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRS 613 (885)
Q Consensus 572 L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~ 613 (885)
|++|||++|+|++.+|..+ ++|+.|++++|++.+..+..
T Consensus 528 L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~Np~~C~c~~~ 566 (844)
T 3j0a_A 528 LEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICECELS 566 (844)
T ss_dssp CCEEEEEEECCCCCCSCCC---SSCCEEEEEEECCCCSSSCC
T ss_pred ccEEECCCCcCCCCChhHh---CCcCEEEecCCCcccccccH
Confidence 9999999999999888775 47899999999999876643
No 13
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=7e-53 Score=494.59 Aligned_cols=488 Identities=22% Similarity=0.246 Sum_probs=353.7
Q ss_pred CcccCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccc
Q 047790 53 HCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQL 132 (885)
Q Consensus 53 ~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~ 132 (885)
.|.|.|+ |+.. +++++ .+|+.+. ++|++|||++|.+++..|..|+++++|++|+|++|++++..|+.|
T Consensus 3 ~C~~~~~-c~~~--------~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~ 70 (549)
T 2z81_A 3 SCDASGV-CDGR--------SRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAF 70 (549)
T ss_dssp EECTTSE-EECT--------TSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTT
T ss_pred cCCCCce-EECC--------CCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhc
Confidence 5999998 8643 34444 5777654 799999999999999889999999999999999999998888999
Q ss_pred cccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCc-cCCcccCCCCCCccccccccccCCCCCcccccccccc
Q 047790 133 GLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNG-TIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSL 211 (885)
Q Consensus 133 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L 211 (885)
+.+++|++|+|++|++++..|..|+++++|++|+|++|++++ ..|..|+++++|++|++++|++.+.+|...+.++++|
T Consensus 71 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L 150 (549)
T 2z81_A 71 YSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSL 150 (549)
T ss_dssp TTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEE
T ss_pred cccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhccccc
Confidence 999999999999999998887889999999999999999986 3577899999999999999996668887779999999
Q ss_pred cEEEeecccCcccCCccccCCCcccceecccccccccccccccCcc-ccCCCCCcEEEecCCcccccc--c-ccccCCCC
Q 047790 212 SYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPE-IGNCSMLKYISLSNNKLSGPI--P-RELCNSGS 287 (885)
Q Consensus 212 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-l~~l~~L~~L~Ls~N~l~~~~--p-~~l~~l~~ 287 (885)
++|++++|++++..|..+..+++|++|+++.|.. +.+|.. +..+++|++|++++|++++.. | .....+++
T Consensus 151 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~------~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~ 224 (549)
T 2z81_A 151 NELEIKALSLRNYQSQSLKSIRDIHHLTLHLSES------AFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSP 224 (549)
T ss_dssp EEEEEEETTCCEECTTTTTTCSEEEEEEEECSBS------TTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCC
T ss_pred CeeeccCCcccccChhhhhccccCceEecccCcc------cccchhhHhhcccccEEEccCCccccccccccchhhhhhc
Confidence 9999999999999999999999999999976652 334444 356889999999999998742 2 22345678
Q ss_pred CcEEEccCCCCcCcccc----cccccCCcceeeccccccCCCCCc------ccCCC-CceeEEeecCccccccCccccCc
Q 047790 288 LVEINLDGNMLSGTIED----VFDRCTNLSELVLVNNRISGSIPE------YISEL-PLKVFDLQYNNFTGVIPVSLWNS 356 (885)
Q Consensus 288 L~~L~L~~N~l~~~~~~----~~~~l~~L~~L~Ls~N~l~~~~p~------~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l 356 (885)
|+.|++++|.+++..+. .+..+++|+.|++++|.+.+...- .+... .++.|+++++.+..... +
T Consensus 225 L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~--~--- 299 (549)
T 2z81_A 225 MKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYL--F--- 299 (549)
T ss_dssp CCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGG--S---
T ss_pred ccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhh--c---
Confidence 99999999988765443 345677888888888887653211 11122 35555555554332100 0
Q ss_pred cccceeecccccccCCCcccccccccccEEEccCCcccccCcccc-cccccccceecccccccCcCC---CccCCCCccc
Q 047790 357 ENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKI-GNLTNIQILKLNSNFFDGIIP---MEFGDCISLN 432 (885)
Q Consensus 357 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~ 432 (885)
...+..+....+|+.|++++|+++ .+|..+ ..+++|++|+|++|++++.+| ..+..+++|+
T Consensus 300 --------------~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~ 364 (549)
T 2z81_A 300 --------------YDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQ 364 (549)
T ss_dssp --------------CCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCC
T ss_pred --------------ccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCc
Confidence 011112333456777777777776 344444 467777777777777776553 3466777777
Q ss_pred EEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccc
Q 047790 433 TLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPES 512 (885)
Q Consensus 433 ~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 512 (885)
+|++++|++++.. ..+..+..+++|++|++++|+++ .+|..+..+++|+.|++++|++++ +
T Consensus 365 ~L~Ls~N~l~~~~--------------~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l--- 425 (549)
T 2z81_A 365 TLVLSQNHLRSMQ--------------KTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-V--- 425 (549)
T ss_dssp EEECTTSCCCCHH--------------HHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-C---
T ss_pred EEEccCCcccccc--------------cchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-c---
Confidence 7777777775211 01134667777777777777777 567777777777777777777762 1
Q ss_pred cccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccC
Q 047790 513 LGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCS 592 (885)
Q Consensus 513 ~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~ 592 (885)
|..+ .++|+.|+|++|+++++ + +.+++|++|+|++|+++ .+|. ...
T Consensus 426 -------------~~~~--~~~L~~L~Ls~N~l~~~--------------~---~~l~~L~~L~Ls~N~l~-~ip~-~~~ 471 (549)
T 2z81_A 426 -------------KTCI--PQTLEVLDVSNNNLDSF--------------S---LFLPRLQELYISRNKLK-TLPD-ASL 471 (549)
T ss_dssp -------------CTTS--CTTCSEEECCSSCCSCC--------------C---CCCTTCCEEECCSSCCS-SCCC-GGG
T ss_pred -------------cchh--cCCceEEECCCCChhhh--------------c---ccCChhcEEECCCCccC-cCCC-ccc
Confidence 2222 14677777775555421 1 35667777777777776 5665 356
Q ss_pred ccccceeecccCcCCCCCCC-CccccccccccccCCcccc
Q 047790 593 LPYLLYLNLADNRLEGEVPR-SGICQNLSIISLTGNKDLC 631 (885)
Q Consensus 593 l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~~N~~~c 631 (885)
+++|++|++++|++++.+|. ...+.+++.+++++||+.|
T Consensus 472 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 511 (549)
T 2z81_A 472 FPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 511 (549)
T ss_dssp CTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCC
T ss_pred CccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccC
Confidence 77777777777777776665 3566667777777777777
No 14
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.3e-51 Score=480.42 Aligned_cols=494 Identities=22% Similarity=0.221 Sum_probs=369.7
Q ss_pred cEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeee
Q 047790 65 RVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLR 144 (885)
Q Consensus 65 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 144 (885)
+++.|+++++.+++..+..+.++++|++|||++|.+++..|..|+++++|++|+|++|++++..|..|+.+++|++|+++
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 56677777777776666667777777777777777776666677777777777777777776666777777777777777
Q ss_pred ccCCCCCCCccccCCccCceEEccCCcCCc-cCCcccCCCCCCccccccccccCCCCCcccccccccc----cEEEeecc
Q 047790 145 SNSFTGEMPSELGDIKQLKSLDFSGNGLNG-TIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSL----SYLDVSNN 219 (885)
Q Consensus 145 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L----~~L~Ls~N 219 (885)
+|++++..+..++++++|++|++++|++++ .+|..|+++++|++|++++|+++ .++...++.+++| ++|++++|
T Consensus 109 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ-SIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCC-EECGGGGHHHHTCTTCCCEEECTTC
T ss_pred ccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccc-eecHHHccchhccchhhhhcccCCC
Confidence 777775555567777777777777777775 35777777777777777777776 4444446667776 67777777
Q ss_pred cCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCccc------ccccccccCCC--CCcEE
Q 047790 220 LLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLS------GPIPRELCNSG--SLVEI 291 (885)
Q Consensus 220 ~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~------~~~p~~l~~l~--~L~~L 291 (885)
.+++..|..+..+ +|+.|+++.|... ...++..+..++.++.+.+.-..+. ......+..+. .++.+
T Consensus 188 ~l~~~~~~~~~~~-~L~~L~l~~n~~~----~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l 262 (570)
T 2z63_A 188 PMNFIQPGAFKEI-RLHKLTLRNNFDS----LNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEF 262 (570)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSC----TTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEE
T ss_pred CceecCHHHhccC-cceeEeccccccc----ccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhh
Confidence 7776666666555 6777777544221 2234455566666666555432221 11122222222 35667
Q ss_pred EccCC-CCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCccccCccccceeeccccccc
Q 047790 292 NLDGN-MLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLE 370 (885)
Q Consensus 292 ~L~~N-~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 370 (885)
+++++ .+.+..++.+..+++|++|++++|.++ .+|..+....|+.|++++|.++ .+|. ..+++|+.|++++|.+.
T Consensus 263 ~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~ 338 (570)
T 2z63_A 263 RLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNFGWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGG 338 (570)
T ss_dssp EEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCCCCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSC
T ss_pred hhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccCCccEEeeccCccc-ccCc--ccccccCEEeCcCCccc
Confidence 77777 777788888888999999999999988 4666666558999999999988 4444 46788999999999887
Q ss_pred CCCcccccccccccEEEccCCcccccC--cccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEE
Q 047790 371 GSLSWEISNAVALEKLDLSSNMLTRQI--PKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVV 448 (885)
Q Consensus 371 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 448 (885)
+..+. ..+++|++|++++|++++.. |..+..+++|++|++++|.+++..+. +..+++|++|++++|++.
T Consensus 339 ~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~------ 409 (570)
T 2z63_A 339 NAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLK------ 409 (570)
T ss_dssp CBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEE------
T ss_pred ccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccc------
Confidence 76665 67888999999999988654 67788889999999999999865554 888999999999988875
Q ss_pred EEeecCCcccCCCc-hhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccce-eccccccccccCCccCCCCC
Q 047790 449 YLLLNNNMLSGKIP-GSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLT-GSIPESLGYLSGNKLYGSVP 526 (885)
Q Consensus 449 ~l~l~~n~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-g~~p~~~~~ls~n~l~~~~p 526 (885)
+..| ..+..+++|++|++++|++++..|..|..+++|+.|++++|+++ +.+ |
T Consensus 410 ----------~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~----------------p 463 (570)
T 2z63_A 410 ----------QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFL----------------P 463 (570)
T ss_dssp ----------SCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEE----------------C
T ss_pred ----------cccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccc----------------h
Confidence 2333 46788999999999999999888889999999999999999987 344 7
Q ss_pred ccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcC
Q 047790 527 TSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRL 606 (885)
Q Consensus 527 ~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l 606 (885)
..|..+++|+.|+|++|+ +++..|..++++++|++|++++|++++.+|..+..+++|++|++++|++
T Consensus 464 ~~~~~l~~L~~L~l~~n~-------------l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~ 530 (570)
T 2z63_A 464 DIFTELRNLTFLDLSQCQ-------------LEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPW 530 (570)
T ss_dssp SCCTTCTTCCEEECTTSC-------------CCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred hhhhcccCCCEEECCCCc-------------cccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcc
Confidence 788889999999999554 4455688899999999999999999987777888999999999999999
Q ss_pred CCCCCCCccc
Q 047790 607 EGEVPRSGIC 616 (885)
Q Consensus 607 ~~~~p~~~~~ 616 (885)
++.+|.....
T Consensus 531 ~~~~~~~~~~ 540 (570)
T 2z63_A 531 DCSCPRIDYL 540 (570)
T ss_dssp CCCTTTTHHH
T ss_pred cCCCcchHHH
Confidence 9988875443
No 15
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.1e-51 Score=487.67 Aligned_cols=503 Identities=18% Similarity=0.234 Sum_probs=296.4
Q ss_pred CHHHHHHHHHHHHhCCCCCCCCCCCCCCC----CcccCCc--cccC---CcEEEEEEecccccccccccccCCCCCCEEe
Q 047790 24 PKQERRSLVHFKNSLQNPQVLSGWNKTTR----HCHWFGV--KCRH---SRVVSLVIQTQSLKGPVSPFLFNLSSLRILD 94 (885)
Q Consensus 24 ~~~~~~aLl~~k~~~~~~~~~~~w~~~~~----~c~w~gv--~c~~---~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~ 94 (885)
.+++.+.-.++++-.. .-.-..|....+ .|.|..- .|.. ..|++ + . -.+++.|+
T Consensus 25 ~~~~~~d~~aL~~~~~-~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C-~--~-------------~~~V~~L~ 87 (636)
T 4eco_A 25 TAEYIKDYLALKEIWD-ALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSL-N--S-------------NGRVTGLS 87 (636)
T ss_dssp CCHHHHHHHHHHHHHH-HTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEE-C--T-------------TCCEEEEE
T ss_pred hhhHHHHHHHHHHHHH-HcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEE-c--C-------------CCCEEEEE
Confidence 3444444555554332 223457864332 3579632 2444 35654 0 0 03678999
Q ss_pred cCCCcccCcCCcCccCcCCCCEEeccCCcC------CC------CCCccccccccccEeeeeccCCCCCCCccccC-Ccc
Q 047790 95 LSKNLLFGQLSPQVSNLKRLKMLSVGENQL------SG------SIPSQLGLLTRLETISLRSNSFTGEMPSELGD-IKQ 161 (885)
Q Consensus 95 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l------~~------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~-l~~ 161 (885)
|++|.+.|.+|+++++|++|++|+|++|.+ .+ .+|... +.+|+ +++++|.+.+.+|..+.. +..
T Consensus 88 L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~ 164 (636)
T 4eco_A 88 LEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKD 164 (636)
T ss_dssp CTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHH
T ss_pred ecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHH
Confidence 999999999999999999999999999976 33 445444 67788 999999999888887773 345
Q ss_pred CceEEccCCcCCccCCcccCCCCCCcccccc--ccccCCCCCcccccccccccEEEeecccCccc---------------
Q 047790 162 LKSLDFSGNGLNGTIPSRLGDLTQLQDLDLS--DNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGN--------------- 224 (885)
Q Consensus 162 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls--~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~--------------- 224 (885)
+..+++....+.. .....++.+.+. .|+++| +|.. ++++++|++|+|++|++++.
T Consensus 165 l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~-l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~ 236 (636)
T 4eco_A 165 CINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKA-VMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQ 236 (636)
T ss_dssp HHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGG-GGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHH
T ss_pred HhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHH-HhcccCCCEEECcCCccccccccccccccccchhc
Confidence 5666666554431 223445555554 588886 8876 88899999999999999874
Q ss_pred --CCcccc--CCCcccceecccccccccccccccCccccCCCCCcEEEecCCc-ccc-cccccccCC------CCCcEEE
Q 047790 225 --IPPEIG--NLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNK-LSG-PIPRELCNS------GSLVEIN 292 (885)
Q Consensus 225 --~p~~~~--~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~-l~~-~~p~~l~~l------~~L~~L~ 292 (885)
+|..++ ++++|++|+++.|.. .+.+|..++++++|++|++++|+ ++| .+|..++.+ ++|++|+
T Consensus 237 ~~ip~~l~~~~l~~L~~L~L~~n~l-----~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~ 311 (636)
T 4eco_A 237 QYKTEDLKWDNLKDLTDVEVYNCPN-----LTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIY 311 (636)
T ss_dssp HHTTSCCCGGGCTTCCEEEEECCTT-----CSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEE
T ss_pred ccCchhhhhcccCCCCEEEecCCcC-----CccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEE
Confidence 555555 555555555533321 34445555555555555555555 555 455555443 5555555
Q ss_pred ccCCCCcCcccc--cccccCCcceeeccccccCCCCCcccCCC-CceeEEeecCccccccCccccCccc-cceeeccccc
Q 047790 293 LDGNMLSGTIED--VFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSEN-LMEFNAASNL 368 (885)
Q Consensus 293 L~~N~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~l~~N~ 368 (885)
|++|+++ .+|. .+..+++|++|++++|+++|.+| .+..+ .|++|++++|+++ .+|..+..+++ |++|++++|.
T Consensus 312 L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~ 388 (636)
T 4eco_A 312 IGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNK 388 (636)
T ss_dssp CCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSC
T ss_pred CCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCc
Confidence 5555555 3333 45555555555555555555555 33333 4555555555555 44445555555 5555555555
Q ss_pred ccCCCcccccccc--cccEEEccCCcccccCccccc-------ccccccceecccccccCcCCCccCCCCcccEEEcCCc
Q 047790 369 LEGSLSWEISNAV--ALEKLDLSSNMLTRQIPKKIG-------NLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSN 439 (885)
Q Consensus 369 l~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 439 (885)
++ .+|..+.... +|++|++++|++++..|..+. .+++|+.|+|++|+++++.+..+..+++|++|+|++|
T Consensus 389 l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N 467 (636)
T 4eco_A 389 LK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGN 467 (636)
T ss_dssp CS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSS
T ss_pred Cc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCC
Confidence 55 3444444332 455555555555555555554 4455555555555555333333344555555555555
Q ss_pred ccCcceeEEEEeecCCcccCCCchhc--------ccCCCCCEEeccCccccCCCCCCcc--cccccceeeeccccceecc
Q 047790 440 NLNGCVVVVYLLLNNNMLSGKIPGSL--------SRLTNLTTLNLFGNLLTGSIPPEFG--DSLKVQGLYLGHNQLTGSI 509 (885)
Q Consensus 440 ~l~~~~~~~~l~l~~n~l~~~~p~~l--------~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~g~~ 509 (885)
+++ .+|... .++++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +
T Consensus 468 ~l~-----------------~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-i 528 (636)
T 4eco_A 468 MLT-----------------EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-F 528 (636)
T ss_dssp CCS-----------------BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-C
T ss_pred CCC-----------------CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-c
Confidence 553 222221 12226666666666666 4555554 66666666666666653 2
Q ss_pred ccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCcc
Q 047790 510 PESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEK 589 (885)
Q Consensus 510 p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~ 589 (885)
|..+..+++|+.|+|++|+ ++++|++.+.+|.+++++++|++|+|++|++ +.+|..
T Consensus 529 ----------------p~~~~~l~~L~~L~Ls~N~-------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~ 584 (636)
T 4eco_A 529 ----------------PTQPLNSSTLKGFGIRNQR-------DAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEK 584 (636)
T ss_dssp ----------------CCGGGGCSSCCEEECCSCB-------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC
T ss_pred ----------------ChhhhcCCCCCEEECCCCc-------ccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHh
Confidence 5566666677777776665 2236666666676676677777777777777 466666
Q ss_pred ccCccccceeecccCcCCC
Q 047790 590 LCSLPYLLYLNLADNRLEG 608 (885)
Q Consensus 590 l~~l~~L~~L~l~~N~l~~ 608 (885)
+. ++|++|++++|++..
T Consensus 585 ~~--~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 585 IT--PNISVLDIKDNPNIS 601 (636)
T ss_dssp CC--TTCCEEECCSCTTCE
T ss_pred Hh--CcCCEEECcCCCCcc
Confidence 54 566777777776653
No 16
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.4e-50 Score=470.78 Aligned_cols=488 Identities=23% Similarity=0.215 Sum_probs=379.2
Q ss_pred cccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccC
Q 047790 79 PVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGD 158 (885)
Q Consensus 79 ~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 158 (885)
.+|..+. +++++|||++|.+++..+..|.++++|++|+|++|++++..|..|+.+++|++|+|++|++++..|.+|++
T Consensus 21 ~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (570)
T 2z63_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (570)
T ss_dssp SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcC
Confidence 3555442 56888999999888877888888888999999888888777788888888888888888888777788888
Q ss_pred CccCceEEccCCcCCccCCcccCCCCCCccccccccccCC-CCCcccccccccccEEEeecccCcccCCccccCCCcccc
Q 047790 159 IKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSG-SLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSD 237 (885)
Q Consensus 159 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 237 (885)
+++|++|++++|++++..+..|+++++|++|++++|.+++ .+|.. +.++++|++|++++|++++..|..++
T Consensus 99 l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~-~~~l~~L~~L~l~~n~l~~~~~~~~~------- 170 (570)
T 2z63_A 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY-FSNLTNLEHLDLSSNKIQSIYCTDLR------- 170 (570)
T ss_dssp CTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGG-GGGCTTCCEEECTTSCCCEECGGGGH-------
T ss_pred ccccccccccccccccCCCccccccccccEEecCCCccceecChhh-hcccCCCCEEeCcCCccceecHHHcc-------
Confidence 8888888888888886666578888888888888888874 35655 78888888888888888754444433
Q ss_pred eecccccccccccccccCccccCCCCC----cEEEecCCcccccccccccCCCCCcEEEccCCCCcC-cccccccccCCc
Q 047790 238 LYLGIGPYQLSLFVGRITPEIGNCSML----KYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSG-TIEDVFDRCTNL 312 (885)
Q Consensus 238 L~l~~n~~~~~~~~~~~~~~l~~l~~L----~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L 312 (885)
.+++| +.|++++|.+++..|..+... +|+.|++++|.... ..+..+..++++
T Consensus 171 ----------------------~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l 227 (570)
T 2z63_A 171 ----------------------VLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGL 227 (570)
T ss_dssp ----------------------HHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTC
T ss_pred ----------------------chhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCcccc
Confidence 33444 799999999998888877766 89999999986542 345556677777
Q ss_pred ceeeccccccCC------CCC---cccCCCCceeEEeecC-ccccccCccccCccccceeecccccccCCCccccccccc
Q 047790 313 SELVLVNNRISG------SIP---EYISELPLKVFDLQYN-NFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVA 382 (885)
Q Consensus 313 ~~L~Ls~N~l~~------~~p---~~~~~~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 382 (885)
+.+.+..+.+.. ... ..+..+.++.++++++ .+.+..|..+..+++|+.|++++|.+.+ +|..+..+ +
T Consensus 228 ~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~-~ 305 (570)
T 2z63_A 228 EVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNF-G 305 (570)
T ss_dssp EEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCC-C
T ss_pred ceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccchh-hhhhhccC-C
Confidence 766655433221 111 1222335778888888 7788888888888888888888888874 66667777 8
Q ss_pred ccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcce----------eEEEEee
Q 047790 383 LEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCV----------VVVYLLL 452 (885)
Q Consensus 383 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~----------~~~~l~l 452 (885)
|++|++++|.++ .+|. ..+++|+.|++++|.+.+..+. ..+++|++|++++|++++.. .++.|++
T Consensus 306 L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l 380 (570)
T 2z63_A 306 WQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDL 380 (570)
T ss_dssp CSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEEC
T ss_pred ccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEEC
Confidence 888888888887 4444 4678888888888888766554 67888888888888887543 2356677
Q ss_pred cCCcccCCCchhcccCCCCCEEeccCccccCCCC-CCcccccccceeeeccccceeccccccccccCCccCCCCCccccc
Q 047790 453 NNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIP-PEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGN 531 (885)
Q Consensus 453 ~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~ 531 (885)
++|.+++..+. +..+++|+.|++++|.+++..| ..+..+++|+.|++++|++++.+ |..|..
T Consensus 381 ~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~----------------~~~~~~ 443 (570)
T 2z63_A 381 SFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAF----------------NGIFNG 443 (570)
T ss_dssp CSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECC----------------TTTTTT
T ss_pred CCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccc----------------hhhhhc
Confidence 77777654444 7788888888888888876655 46778888888888888877644 778888
Q ss_pred cccCcEEEccCCCCCCceeeeecccccc-cccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCC
Q 047790 532 LNGLTHLDLSCNELDGIVGLYVQSNKFY-GEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEV 610 (885)
Q Consensus 532 l~~L~~L~Ls~N~l~~~~~l~~~~n~l~-g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~ 610 (885)
+++|+.|+|++|+ ++ +.+|..++.+++|++|++++|++++.+|..+..+++|++|++++|++++.+
T Consensus 444 l~~L~~L~l~~n~-------------l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 510 (570)
T 2z63_A 444 LSSLEVLKMAGNS-------------FQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVP 510 (570)
T ss_dssp CTTCCEEECTTCE-------------EGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCcEEECcCCc-------------CccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCC
Confidence 9999999999554 44 578999999999999999999999888999999999999999999999987
Q ss_pred CC-CccccccccccccCCccccccccCCccccc
Q 047790 611 PR-SGICQNLSIISLTGNKDLCEKIMGSDCQIL 642 (885)
Q Consensus 611 p~-~~~~~~~~~~~~~~N~~~c~~~~~~~c~~~ 642 (885)
|. ...+.+++.+++.+||+.| +|...
T Consensus 511 ~~~~~~l~~L~~L~l~~N~~~~------~~~~~ 537 (570)
T 2z63_A 511 DGIFDRLTSLQKIWLHTNPWDC------SCPRI 537 (570)
T ss_dssp TTTTTTCTTCCEEECCSSCBCC------CTTTT
T ss_pred HHHhhcccCCcEEEecCCcccC------CCcch
Confidence 75 3678899999999999999 67643
No 17
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=3.7e-49 Score=462.91 Aligned_cols=452 Identities=19% Similarity=0.192 Sum_probs=339.3
Q ss_pred EEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCc
Q 047790 92 ILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNG 171 (885)
Q Consensus 92 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 171 (885)
+.|++++.++ .+|+.+. ++|++|+|++|++++..|..|+.+++|++|+|++|++++..|..|+.+++|++|+|++|+
T Consensus 9 ~c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 85 (549)
T 2z81_A 9 VCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNH 85 (549)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred eEECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCc
Confidence 3567777775 4555543 677788888887777667777777777777777777777667777777777777777777
Q ss_pred CCccCCcccCCCCCCccccccccccCC-CCCcccccccccccEEEeecccCcccCCccccCCCcccceeccccccccccc
Q 047790 172 LNGTIPSRLGDLTQLQDLDLSDNLLSG-SLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLF 250 (885)
Q Consensus 172 l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~ 250 (885)
+++..|..|+++++|++|+|++|++++ .+|. .++++++|++|++++|++.+.+|
T Consensus 86 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~-~~~~l~~L~~L~L~~n~~~~~~~------------------------ 140 (549)
T 2z81_A 86 LSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTS-LFPNLTNLQTLRIGNVETFSEIR------------------------ 140 (549)
T ss_dssp CCSCCHHHHTTCTTCCEEECTTCCCSSSCSSC-SCTTCTTCCEEEEEESSSCCEEC------------------------
T ss_pred cCccCHHHhccCCCCcEEECCCCcccccchhh-hhhccCCccEEECCCCccccccC------------------------
Confidence 776666667777777777777777763 2233 36777777777777776432222
Q ss_pred ccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCC--Cc
Q 047790 251 VGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSI--PE 328 (885)
Q Consensus 251 ~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--p~ 328 (885)
+..++.+++|++|++++|++++..|..+..+++|++|++++|.+...+...+..+++|++|++++|++++.. |.
T Consensus 141 ----~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 216 (549)
T 2z81_A 141 ----RIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPL 216 (549)
T ss_dssp ----TTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCC
T ss_pred ----HhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCcccccccccc
Confidence 124556677888888888888878888888888888888888877665555566888888888888887642 22
Q ss_pred cc-CCC-CceeEEeecCccccccCcc----ccCccccceeecccccccCCC------cccccccccccEEEccCCccccc
Q 047790 329 YI-SEL-PLKVFDLQYNNFTGVIPVS----LWNSENLMEFNAASNLLEGSL------SWEISNAVALEKLDLSSNMLTRQ 396 (885)
Q Consensus 329 ~~-~~~-~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~l~~N~l~~~~------~~~~~~l~~L~~L~Ls~N~l~~~ 396 (885)
.+ ... .++.|++++|.+++..+.. +..+++|+.+++++|.+.+.. ...+..+.+|+.|++.++.+...
T Consensus 217 ~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~ 296 (549)
T 2z81_A 217 PVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQF 296 (549)
T ss_dssp SSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCG
T ss_pred chhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchh
Confidence 22 122 6888888888887755443 356678899999998887642 23356778899999999987642
Q ss_pred -----CcccccccccccceecccccccCcCCCcc-CCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCc---hhccc
Q 047790 397 -----IPKKIGNLTNIQILKLNSNFFDGIIPMEF-GDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIP---GSLSR 467 (885)
Q Consensus 397 -----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p---~~l~~ 467 (885)
.+..+...++|+.|++++|+++ .+|..+ ..+++|++|++++|++++ .+| ..++.
T Consensus 297 ~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~----------------~~~~~~~~~~~ 359 (549)
T 2z81_A 297 YLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVE----------------EYLKNSACKGA 359 (549)
T ss_dssp GGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCH----------------HHHHHHTCTTS
T ss_pred hhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCcccc----------------ccccchhhhhc
Confidence 1222344678999999999998 566655 679999999999999863 333 34788
Q ss_pred CCCCCEEeccCccccCCCC--CCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCC
Q 047790 468 LTNLTTLNLFGNLLTGSIP--PEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNEL 545 (885)
Q Consensus 468 l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 545 (885)
+++|+.|++++|++++..+ ..+..+++|+.|++++|+++ .+|..+..+++|+.|+|++|++
T Consensus 360 l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-----------------~lp~~~~~~~~L~~L~Ls~N~l 422 (549)
T 2z81_A 360 WPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-----------------PMPDSCQWPEKMRFLNLSSTGI 422 (549)
T ss_dssp STTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-----------------CCCSCCCCCTTCCEEECTTSCC
T ss_pred cccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-----------------cCChhhcccccccEEECCCCCc
Confidence 9999999999999985432 45889999999999999998 3477888999999999998887
Q ss_pred CCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCCcccccccccccc
Q 047790 546 DGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLT 625 (885)
Q Consensus 546 ~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~ 625 (885)
+. +|..+ .++|++|||++|++++.+ ..+++|++|++++|+|+ .+|....+.+++.++++
T Consensus 423 ~~--------------l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~~~~l~~L~~L~Ls 481 (549)
T 2z81_A 423 RV--------------VKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPDASLFPVLLVMKIS 481 (549)
T ss_dssp SC--------------CCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCCGGGCTTCCEEECC
T ss_pred cc--------------ccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCCcccCccCCEEecC
Confidence 63 33333 258999999999999643 47899999999999998 56767788899999999
Q ss_pred CCccc
Q 047790 626 GNKDL 630 (885)
Q Consensus 626 ~N~~~ 630 (885)
+|...
T Consensus 482 ~N~l~ 486 (549)
T 2z81_A 482 RNQLK 486 (549)
T ss_dssp SSCCC
T ss_pred CCccC
Confidence 99754
No 18
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.1e-49 Score=477.15 Aligned_cols=466 Identities=19% Similarity=0.208 Sum_probs=270.1
Q ss_pred CCCCEEecCCCcccCcCCcCccCcCCCCEEec-cCCcCCCCCCcccccc----cc-----ccEe------ee-eccCCC-
Q 047790 88 SSLRILDLSKNLLFGQLSPQVSNLKRLKMLSV-GENQLSGSIPSQLGLL----TR-----LETI------SL-RSNSFT- 149 (885)
Q Consensus 88 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L-~~n~l~~~~p~~~~~l----~~-----L~~L------~L-s~N~l~- 149 (885)
.+++.|+|++|.+.|.+|+.|++|++|++|+| ++|.++|..|-.-... +. ++.. +. ....+.
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 46889999999999999999999999999999 9998887744321111 00 0000 00 000000
Q ss_pred ----------CCCCccccCCccCceEEccC--CcCCccCCcccCCCCCCccccccccccCC-----------------CC
Q 047790 150 ----------GEMPSELGDIKQLKSLDFSG--NGLNGTIPSRLGDLTQLQDLDLSDNLLSG-----------------SL 200 (885)
Q Consensus 150 ----------~~~p~~l~~l~~L~~L~Ls~--N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-----------------~~ 200 (885)
...+........++.+.+.. |++++ +|..|+++++|++|+|++|+++| .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 00000111112233333332 44444 44445555555555555555543 25
Q ss_pred Cccc-ccccccccEEEeecccCcccCCccccCCCcccceeccccccccccccc-ccCcccc-------CCCCCcEEEecC
Q 047790 201 PVSL-LKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVG-RITPEIG-------NCSMLKYISLSN 271 (885)
Q Consensus 201 p~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~-~~~~~l~-------~l~~L~~L~Ls~ 271 (885)
|..+ |.++++|++|+|++|++.+.+|..++++++|+.|+++.|. .+.| .+|..++ .+++|++|++++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~----~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~ 557 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR----GISAAQLKADWTRLADDEDTGPKIQIFYMGY 557 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT----TSCHHHHHHHHHHHHHCTTTTTTCCEEECCS
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC----CcccccchHHHHhhhhcccccCCccEEEeeC
Confidence 5552 2256666666666666655555555555444444443222 0122 3333333 334677777777
Q ss_pred Ccccccccc--cccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC-C-ceeEEeecCcccc
Q 047790 272 NKLSGPIPR--ELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-P-LKVFDLQYNNFTG 347 (885)
Q Consensus 272 N~l~~~~p~--~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~-L~~L~Ls~N~l~~ 347 (885)
|+++ .+|. .+..+++|+.|+|++|.++ .+| .|..+++|+.|+|++|+++ .+|..+..+ . |+.|++++|+++
T Consensus 558 N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~- 632 (876)
T 4ecn_A 558 NNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK- 632 (876)
T ss_dssp SCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-
T ss_pred CcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-
Confidence 7776 5666 6666667777777777666 344 5666666666666666666 444444433 3 555555555555
Q ss_pred ccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccc---c--ccccccceecccccccCcCC
Q 047790 348 VIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKI---G--NLTNIQILKLNSNFFDGIIP 422 (885)
Q Consensus 348 ~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~--~l~~L~~L~Ls~N~l~~~~p 422 (885)
.+|..+..+.. ++|+.|+|++|++++.+|... . .+++|+.|+|++|+++.+.+
T Consensus 633 ~lp~~~~~~~~----------------------~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~ 690 (876)
T 4ecn_A 633 YIPNIFNAKSV----------------------YVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPT 690 (876)
T ss_dssp SCCSCCCTTCS----------------------SCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCH
T ss_pred cCchhhhcccc----------------------CCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCH
Confidence 33433333221 125555555555554433221 1 22356666666666653222
Q ss_pred CccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchh--------cccCCCCCEEeccCccccCCCCCCcc--cc
Q 047790 423 MEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGS--------LSRLTNLTTLNLFGNLLTGSIPPEFG--DS 492 (885)
Q Consensus 423 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~--------l~~l~~L~~L~Ls~N~l~~~~p~~~~--~l 492 (885)
..+..+++|+.|+|++|+|+ .+|.. +.++++|+.|+|++|+++ .+|..+. .+
T Consensus 691 ~~~~~l~~L~~L~Ls~N~L~-----------------~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l 752 (876)
T 4ecn_A 691 ELFATGSPISTIILSNNLMT-----------------SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTL 752 (876)
T ss_dssp HHHHTTCCCSEEECCSCCCS-----------------CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTC
T ss_pred HHHccCCCCCEEECCCCcCC-----------------ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccC
Confidence 23335566666666666554 22222 223447778888888777 6777776 77
Q ss_pred cccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccc
Q 047790 493 LKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQL 572 (885)
Q Consensus 493 ~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L 572 (885)
++|+.|+|++|++++ + |..+..+++|+.|+|++|+ ++++|++.+.+|..++++++|
T Consensus 753 ~~L~~L~Ls~N~L~~-l----------------p~~l~~L~~L~~L~Ls~N~-------~ls~N~l~~~ip~~l~~L~~L 808 (876)
T 4ecn_A 753 PYLSNMDVSYNCFSS-F----------------PTQPLNSSQLKAFGIRHQR-------DAEGNRILRQWPTGITTCPSL 808 (876)
T ss_dssp TTCCEEECCSSCCSS-C----------------CCGGGGCTTCCEEECCCCB-------CTTCCBCCCCCCTTGGGCSSC
T ss_pred CCcCEEEeCCCCCCc-c----------------chhhhcCCCCCEEECCCCC-------CcccccccccChHHHhcCCCC
Confidence 788888888887774 3 6677788888888888776 334788888888888888888
Q ss_pred cccccccccCCCCCCccccCccccceeecccCcCCCCCCCCcccc--ccccccccCCcccc
Q 047790 573 EYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQ--NLSIISLTGNKDLC 631 (885)
Q Consensus 573 ~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~--~~~~~~~~~N~~~c 631 (885)
++|+|++|++ +.||..+. ++|+.|||++|++....+. ..+. ......+.+|+..|
T Consensus 809 ~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~-~~~~~~~~~~~~L~~n~~~~ 865 (876)
T 4ecn_A 809 IQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVT-SVCPYIEAGMYVLLYDKTQD 865 (876)
T ss_dssp CEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECG-GGHHHHHTTCCEEECCTTSE
T ss_pred CEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChH-HccccccchheeecCCCccc
Confidence 8888888888 58888865 6888999999988754332 2222 23456667776654
No 19
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=9.8e-50 Score=464.34 Aligned_cols=454 Identities=19% Similarity=0.220 Sum_probs=306.4
Q ss_pred EEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccC
Q 047790 68 SLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNS 147 (885)
Q Consensus 68 ~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 147 (885)
.+++++++++ .+|..+. ++|++|||++|.+++..|..|+++++|++|+|++|++++..|..|+.+++|++|+|++|+
T Consensus 4 ~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 80 (520)
T 2z7x_B 4 LVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNK 80 (520)
T ss_dssp EEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSC
T ss_pred eEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCc
Confidence 4677777777 4676655 778888888888877666777888888888888888877667778888888888888888
Q ss_pred CCCCCCccccCCccCceEEccCCcCCc-cCCcccCCCCCCccccccccccCCCCCcccccccccc--cEEEeecccC--c
Q 047790 148 FTGEMPSELGDIKQLKSLDFSGNGLNG-TIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSL--SYLDVSNNLL--S 222 (885)
Q Consensus 148 l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L--~~L~Ls~N~l--~ 222 (885)
++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|++++ ..+..+++| ++|++++|++ +
T Consensus 81 l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~----~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 81 LV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK----SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG----GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred ee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch----hhccccccceeeEEEeeccccccc
Confidence 77 45555 67788888888888776 467777888888888888887763 235666777 8888888877 6
Q ss_pred ccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccc-cccCCCCCcEEEccCCC----
Q 047790 223 GNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPR-ELCNSGSLVEINLDGNM---- 297 (885)
Q Consensus 223 ~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~L~~N~---- 297 (885)
+..|..+..+.. +.+ .+++++|++.+.++. .+..+++|+.|++++|.
T Consensus 154 ~~~~~~l~~l~~-~~l---------------------------~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 205 (520)
T 2z7x_B 154 KEDPEGLQDFNT-ESL---------------------------HIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNK 205 (520)
T ss_dssp SCCTTTTTTCCE-EEE---------------------------EEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTT
T ss_pred cccccccccccc-ceE---------------------------EEEeccCcchhhhhhhhhhcccceeeccccccccccc
Confidence 666666665542 222 223333433332221 23334444444444443
Q ss_pred ---CcCcccccccccCCcceeeccccccCCCCCcc----cCCCCceeEEeecCccccccCccc-----cCccccceeecc
Q 047790 298 ---LSGTIEDVFDRCTNLSELVLVNNRISGSIPEY----ISELPLKVFDLQYNNFTGVIPVSL-----WNSENLMEFNAA 365 (885)
Q Consensus 298 ---l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~~~L~~L~Ls~N~l~~~~p~~~-----~~l~~L~~L~l~ 365 (885)
+.+.++ .+..+++|+.|++++|.+++..+.. .....|++|++++|+++|.+|..+ ..+++|+.++++
T Consensus 206 ~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~ 284 (520)
T 2z7x_B 206 CSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVV 284 (520)
T ss_dssp THHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEE
T ss_pred cceeecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEecccc
Confidence 333333 3444455555555554444321111 111245666666666665666655 666677777777
Q ss_pred cccccCCCc-cccccc---ccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCccc
Q 047790 366 SNLLEGSLS-WEISNA---VALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNL 441 (885)
Q Consensus 366 ~N~l~~~~~-~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 441 (885)
+|.+ .+| ..+..+ .+|+.|++++|++.... .+..+++|++|++++|++++.+|..+..+++|++|++++|++
T Consensus 285 ~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l 360 (520)
T 2z7x_B 285 SDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQL 360 (520)
T ss_dssp ECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCC
T ss_pred ccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCcc
Confidence 7766 333 334433 56888888888876432 125778888888888888888888888888888888888887
Q ss_pred CcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCC-cccccccceeeeccccceeccccccccccCCc
Q 047790 442 NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPE-FGDSLKVQGLYLGHNQLTGSIPESLGYLSGNK 520 (885)
Q Consensus 442 ~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~ 520 (885)
++.. .+|..+..+++|++|++++|++++.+|.. +..+++|+.|++++|++++.+|
T Consensus 361 ~~l~--------------~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~---------- 416 (520)
T 2z7x_B 361 KELS--------------KIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIF---------- 416 (520)
T ss_dssp CBHH--------------HHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGG----------
T ss_pred Cccc--------------cchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchh----------
Confidence 5321 45677888888888888888888756654 7778888888888888876553
Q ss_pred cCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCcc-ccCcccccee
Q 047790 521 LYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEK-LCSLPYLLYL 599 (885)
Q Consensus 521 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~-l~~l~~L~~L 599 (885)
..+. ++|+.|+|++|+++ .+|..+..+++|++|+|++|+++ .+|.. +..+++|++|
T Consensus 417 ------~~l~--~~L~~L~Ls~N~l~--------------~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L 473 (520)
T 2z7x_B 417 ------RCLP--PRIKVLDLHSNKIK--------------SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKI 473 (520)
T ss_dssp ------GSCC--TTCCEEECCSSCCC--------------CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEE
T ss_pred ------hhhc--ccCCEEECCCCccc--------------ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEE
Confidence 3332 67888888866554 67777778888888888888888 56665 7788888888
Q ss_pred ecccCcCCCCCC
Q 047790 600 NLADNRLEGEVP 611 (885)
Q Consensus 600 ~l~~N~l~~~~p 611 (885)
++++|++++..+
T Consensus 474 ~l~~N~~~c~c~ 485 (520)
T 2z7x_B 474 WLHTNPWDCSCP 485 (520)
T ss_dssp ECCSSCBCCCHH
T ss_pred ECcCCCCcccCC
Confidence 888888877554
No 20
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.1e-49 Score=461.61 Aligned_cols=457 Identities=21% Similarity=0.197 Sum_probs=371.0
Q ss_pred CEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCC
Q 047790 91 RILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGN 170 (885)
Q Consensus 91 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 170 (885)
++||+++|.++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 57899999887 5777666 88899999999988777788888899999999999988777888888889999999999
Q ss_pred cCCccCCcccCCCCCCccccccccccCC-CCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccc
Q 047790 171 GLNGTIPSRLGDLTQLQDLDLSDNLLSG-SLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSL 249 (885)
Q Consensus 171 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~ 249 (885)
+|+ .+|.. .+++|++|+|++|++++ .+|.. ++++++|++|++++|++++ ..
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~-~~~l~~L~~L~L~~n~l~~---~~--------------------- 131 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKE-FGNMSQLKFLGLSTTHLEK---SS--------------------- 131 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGG-GGGCTTCCEEEEEESSCCG---GG---------------------
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhh-hccCCcceEEEecCcccch---hh---------------------
Confidence 888 55655 78888888888888874 34544 7888888888888888763 11
Q ss_pred cccccCccccCCCCC--cEEEecCCcc--cccccccccCCC-CCcEEEccCCCCcCccc-ccccccCCcceeeccccc--
Q 047790 250 FVGRITPEIGNCSML--KYISLSNNKL--SGPIPRELCNSG-SLVEINLDGNMLSGTIE-DVFDRCTNLSELVLVNNR-- 321 (885)
Q Consensus 250 ~~~~~~~~l~~l~~L--~~L~Ls~N~l--~~~~p~~l~~l~-~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~-- 321 (885)
+..+++| ++|++++|++ ++..|..+..+. +...+++++|.+.+..+ ..+..+++|+.|++++|.
T Consensus 132 --------~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 203 (520)
T 2z7x_B 132 --------VLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLED 203 (520)
T ss_dssp --------GGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCST
T ss_pred --------ccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccc
Confidence 2334455 9999999999 788888887765 35567889998876544 467889999999999997
Q ss_pred -----cCCCCCcccCCC-CceeEEeecCccccccCcccc---CccccceeecccccccCCCcccc-----cccccccEEE
Q 047790 322 -----ISGSIPEYISEL-PLKVFDLQYNNFTGVIPVSLW---NSENLMEFNAASNLLEGSLSWEI-----SNAVALEKLD 387 (885)
Q Consensus 322 -----l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~l~~N~l~~~~~~~~-----~~l~~L~~L~ 387 (885)
+.+.+| .+..+ .|+.|++++|.+++..+..+. ..++|++|++++|.+.+.+|..+ ..+++|+.++
T Consensus 204 ~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~ 282 (520)
T 2z7x_B 204 NKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQ 282 (520)
T ss_dssp TTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEE
T ss_pred cccceeecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEecc
Confidence 666666 34444 799999999998875443322 23589999999999998888888 8999999999
Q ss_pred ccCCcccccCc-cccccc---ccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCch
Q 047790 388 LSSNMLTRQIP-KKIGNL---TNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPG 463 (885)
Q Consensus 388 Ls~N~l~~~~p-~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~ 463 (885)
+++|.+ .+| ..+..+ ++|+.|++++|.+.+.. .+..+++|++|++++|+++ +.+|.
T Consensus 283 l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~----------------~~~~~ 342 (520)
T 2z7x_B 283 VVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLT----------------DTVFE 342 (520)
T ss_dssp EEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCC----------------TTTTT
T ss_pred ccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccC----------------hhhhh
Confidence 999999 355 566655 67999999999987532 2368889999999988875 46788
Q ss_pred hcccCCCCCEEeccCccccC--CCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEcc
Q 047790 464 SLSRLTNLTTLNLFGNLLTG--SIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLS 541 (885)
Q Consensus 464 ~l~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls 541 (885)
.++.+++|+.|++++|++++ .+|..+..+++|+.|++++|++++.+| +..|..+++|+.|+|+
T Consensus 343 ~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~---------------~~~~~~l~~L~~L~Ls 407 (520)
T 2z7x_B 343 NCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEK---------------KGDCSWTKSLLSLNMS 407 (520)
T ss_dssp TCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGG---------------GCSCCCCTTCCEEECC
T ss_pred hhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccc---------------cchhccCccCCEEECc
Confidence 89999999999999999996 566789999999999999999997553 2357889999999999
Q ss_pred CCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCC-Cccccccc
Q 047790 542 CNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPR-SGICQNLS 620 (885)
Q Consensus 542 ~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~ 620 (885)
+|+ +++.+|..+. ++|++|+|++|+++ .+|..+..+++|++|++++|++++.++. ...+.+++
T Consensus 408 ~N~-------------l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~ 471 (520)
T 2z7x_B 408 SNI-------------LTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQ 471 (520)
T ss_dssp SSC-------------CCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CCC-------------CCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCccc
Confidence 555 4456777664 79999999999999 8999999999999999999999975554 56678899
Q ss_pred cccccCCccccccccCCccccccc
Q 047790 621 IISLTGNKDLCEKIMGSDCQILTF 644 (885)
Q Consensus 621 ~~~~~~N~~~c~~~~~~~c~~~~~ 644 (885)
.+++++||+.| +|...|+
T Consensus 472 ~L~l~~N~~~c------~c~~~~~ 489 (520)
T 2z7x_B 472 KIWLHTNPWDC------SCPRIDY 489 (520)
T ss_dssp EEECCSSCBCC------CHHHHHH
T ss_pred EEECcCCCCcc------cCCchHH
Confidence 99999999999 8987765
No 21
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=4.2e-48 Score=462.48 Aligned_cols=538 Identities=21% Similarity=0.190 Sum_probs=382.2
Q ss_pred CCCCCCCCCCCCcccCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccC
Q 047790 42 QVLSGWNKTTRHCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGE 121 (885)
Q Consensus 42 ~~~~~w~~~~~~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 121 (885)
+.+++|.... +..|....|.... +.++-++.+++ .||+.+- +++++|||++|.|++..+..|+++++|++|+|++
T Consensus 11 ~~~~~~~~~~-p~~~~~c~~~~~~-~~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~ 85 (635)
T 4g8a_A 11 DKLAAANSSI-PESWEPCVEVVPN-ITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSR 85 (635)
T ss_dssp ---------------CCSEEEETT-TEEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred chhhcccCCC-CCCCCCccccCCC-CEEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCC
Confidence 3566665332 2335443332221 11233344555 4665442 4789999999999988888999999999999999
Q ss_pred CcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCC
Q 047790 122 NQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLP 201 (885)
Q Consensus 122 n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 201 (885)
|+|++..|.+|+++++|++|+|++|+|++..+.+|+++++|++|+|++|++++..+..|+++++|++|+|++|++++...
T Consensus 86 N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~ 165 (635)
T 4g8a_A 86 CEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKL 165 (635)
T ss_dssp CCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCC
T ss_pred CcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCC
Confidence 99998778889999999999999999997777789999999999999999998777889999999999999999974322
Q ss_pred cccccccccccEEEeecccCcccCCccccCCCcccc----eecccccccccccccccCccccCCCCCcEEEecCCccccc
Q 047790 202 VSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSD----LYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGP 277 (885)
Q Consensus 202 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~----L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 277 (885)
...+..+++|++|++++|++++..|..+..+.+++. ++++.|. ...+++.......++.+++++|.....
T Consensus 166 ~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~------l~~i~~~~~~~~~~~~l~l~~n~~~~~ 239 (635)
T 4g8a_A 166 PEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP------MNFIQPGAFKEIRLHKLTLRNNFDSLN 239 (635)
T ss_dssp CGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCC------CCEECTTTTTTCEEEEEEEESCCSSHH
T ss_pred chhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCc------ccccCcccccchhhhhhhhhccccccc
Confidence 344888999999999999999888888887776654 4444333 233444444555667777777765432
Q ss_pred -ccccccCCCCCcEEEccCCC------CcCc---------------------------ccccccccCCcceeeccccccC
Q 047790 278 -IPRELCNSGSLVEINLDGNM------LSGT---------------------------IEDVFDRCTNLSELVLVNNRIS 323 (885)
Q Consensus 278 -~p~~l~~l~~L~~L~L~~N~------l~~~---------------------------~~~~~~~l~~L~~L~Ls~N~l~ 323 (885)
.+..+..+..++...+..+. +... ....+....+++.+++.+|.+.
T Consensus 240 ~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ 319 (635)
T 4g8a_A 240 VMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIE 319 (635)
T ss_dssp HHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEE
T ss_pred ccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccc
Confidence 22334445555544442211 1111 1223444556666666666655
Q ss_pred CCCCcccCCCCceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccc--cCcccc
Q 047790 324 GSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTR--QIPKKI 401 (885)
Q Consensus 324 ~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~ 401 (885)
...+ ......++.|++++|.+.+..+. .+..|+.+++..|.+.... ....+++|+.|++++|.+.. ..+..+
T Consensus 320 ~~~~-~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~ 393 (635)
T 4g8a_A 320 RVKD-FSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNAF--SEVDLPSLEFLDLSRNGLSFKGCCSQSD 393 (635)
T ss_dssp ECGG-GGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCBC--CCCBCTTCCEEECCSSCCBEEEECCHHH
T ss_pred cccc-cccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCCCc--ccccccccccchhhccccccccccccch
Confidence 3322 11122567777777776655443 3455666677776655432 24466777777777777643 344555
Q ss_pred cccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccc
Q 047790 402 GNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLL 481 (885)
Q Consensus 402 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l 481 (885)
..+.+|+.|+++.|.+.. .+..+..+++|+.++++.|+.. ....+..+..+++++.++++.|.+
T Consensus 394 ~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~---------------~~~~~~~~~~l~~l~~l~ls~n~l 457 (635)
T 4g8a_A 394 FGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLK---------------QMSEFSVFLSLRNLIYLDISHTHT 457 (635)
T ss_dssp HSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEE---------------STTSSCTTTTCTTCCEEECTTSCC
T ss_pred hhhhhhhhhhcccccccc-ccccccccccccchhhhhcccc---------------cccccccccccccccccccccccc
Confidence 666777777777777764 4556777777777777776653 123345678899999999999999
Q ss_pred cCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccc
Q 047790 482 TGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGE 561 (885)
Q Consensus 482 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ 561 (885)
++..|..+..+++|+.|++++|++.+.+ .|..|..+++|+.|||++|++ ++.
T Consensus 458 ~~~~~~~~~~~~~L~~L~Ls~N~~~~~~---------------~~~~~~~l~~L~~L~Ls~N~L-------------~~l 509 (635)
T 4g8a_A 458 RVAFNGIFNGLSSLEVLKMAGNSFQENF---------------LPDIFTELRNLTFLDLSQCQL-------------EQL 509 (635)
T ss_dssp EECCTTTTTTCTTCCEEECTTCEEGGGE---------------ECSCCTTCTTCCEEECTTSCC-------------CEE
T ss_pred ccccccccccchhhhhhhhhhccccccc---------------CchhhhhccccCEEECCCCcc-------------CCc
Confidence 9888999999999999999999865432 378899999999999995554 556
Q ss_pred cchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCC-ccc-cccccccccCCccccccccCCcc
Q 047790 562 IPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRS-GIC-QNLSIISLTGNKDLCEKIMGSDC 639 (885)
Q Consensus 562 ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~-~~~-~~~~~~~~~~N~~~c~~~~~~~c 639 (885)
+|..|+++++|++|+|++|+|++..|..+..+++|++|||++|+|++.+|.. ..+ .+++.+++++|||.| ||
T Consensus 510 ~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C------~C 583 (635)
T 4g8a_A 510 SPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC------TC 583 (635)
T ss_dssp CTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCC------SG
T ss_pred ChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcc------cC
Confidence 6889999999999999999999888888999999999999999999988865 333 678999999999999 99
Q ss_pred ccccccc
Q 047790 640 QILTFGK 646 (885)
Q Consensus 640 ~~~~~~~ 646 (885)
...|+..
T Consensus 584 ~~~~~~~ 590 (635)
T 4g8a_A 584 EHQSFLQ 590 (635)
T ss_dssp GGHHHHH
T ss_pred CcHHHHH
Confidence 9888653
No 22
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1e-46 Score=442.60 Aligned_cols=456 Identities=20% Similarity=0.213 Sum_probs=315.3
Q ss_pred EEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeecc
Q 047790 67 VSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSN 146 (885)
Q Consensus 67 ~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N 146 (885)
..++++++++++ +|..+. ++|++|||++|.+++..|..|+++++|++|+|++|++++..|+.|+.+++|++|+|++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 678888888885 777664 88999999999998888889999999999999999999888889999999999999999
Q ss_pred CCCCCCCccccCCccCceEEccCCcCCc-cCCcccCCCCCCccccccccccCCCCCcccccccccc--cEEEeecccC--
Q 047790 147 SFTGEMPSELGDIKQLKSLDFSGNGLNG-TIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSL--SYLDVSNNLL-- 221 (885)
Q Consensus 147 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L--~~L~Ls~N~l-- 221 (885)
+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++ .+ +..+++| ++|++++|++
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~-~~---~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ-LD---LLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT-TT---TGGGTTSCEEEEEEEESSCCC
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc-Cc---hhhhhhceeeEEEeecccccc
Confidence 998 66766 78999999999999986 346789999999999999999974 22 4555666 9999999999
Q ss_pred cccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccc-cccCCCCCcEEEccCCC---
Q 047790 222 SGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPR-ELCNSGSLVEINLDGNM--- 297 (885)
Q Consensus 222 ~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~L~~N~--- 297 (885)
++..|..+..++. +.+. +++++|.+.+.++. .+..+++|+.+++++|+
T Consensus 184 ~~~~~~~l~~l~~-~~l~---------------------------l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 235 (562)
T 3a79_B 184 KGGETESLQIPNT-TVLH---------------------------LVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENC 235 (562)
T ss_dssp CSSSCCEEEECCE-EEEE---------------------------EEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTH
T ss_pred cccCcccccccCc-ceEE---------------------------EEecCccchhhhhhhcccccceEEEeccccccccc
Confidence 7777777766542 2222 23333333332221 22333444444444442
Q ss_pred --CcCcccccccccCCcceeeccccccCCC----CCcccCCCCceeEEeecCccccccCccc-----cCccccceeeccc
Q 047790 298 --LSGTIEDVFDRCTNLSELVLVNNRISGS----IPEYISELPLKVFDLQYNNFTGVIPVSL-----WNSENLMEFNAAS 366 (885)
Q Consensus 298 --l~~~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~~~L~~L~Ls~N~l~~~~p~~~-----~~l~~L~~L~l~~ 366 (885)
+.+. ...+..+++|+.|+++++.+.+. ++......+|++|++++|+++|.+|..+ ..++.|+.+++..
T Consensus 236 ~~l~~~-~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~ 314 (562)
T 3a79_B 236 QRLMTF-LSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKN 314 (562)
T ss_dssp HHHHHH-HHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEE
T ss_pred chHHHH-HHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhccc
Confidence 1111 11234445555555554444321 1111112256666666666666666555 4555555555555
Q ss_pred ccccCCCc-ccccc---cccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccC
Q 047790 367 NLLEGSLS-WEISN---AVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLN 442 (885)
Q Consensus 367 N~l~~~~~-~~~~~---l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 442 (885)
|.+ .+| ..+.. ..+|++|++++|.+.... ....+++|++|++++|++++.+|..+.++++|++|++++|+++
T Consensus 315 ~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 390 (562)
T 3a79_B 315 QVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK 390 (562)
T ss_dssp CCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCC
T ss_pred cee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcC
Confidence 555 222 22222 246888888888875322 1257788888888888888888888888888888888888875
Q ss_pred cceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCC-CcccccccceeeeccccceeccccccccccCCcc
Q 047790 443 GCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPP-EFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKL 521 (885)
Q Consensus 443 ~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l 521 (885)
+.. .+|..+..+++|+.|++++|++++.+|. .+..+++|+.|++++|++++.+|
T Consensus 391 ~~~--------------~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~----------- 445 (562)
T 3a79_B 391 NFF--------------KVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVF----------- 445 (562)
T ss_dssp BTT--------------HHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGG-----------
T ss_pred Ccc--------------cchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchh-----------
Confidence 221 3456678888888888888888875555 47778888888888888876553
Q ss_pred CCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCcc-ccCccccceee
Q 047790 522 YGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEK-LCSLPYLLYLN 600 (885)
Q Consensus 522 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~-l~~l~~L~~L~ 600 (885)
..+. ++|+.|+|++|+++ .+|..+..+++|++|+|++|+++ .+|.. +..+++|++|+
T Consensus 446 -----~~l~--~~L~~L~L~~N~l~--------------~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~ 503 (562)
T 3a79_B 446 -----RCLP--PKVKVLDLHNNRIM--------------SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIW 503 (562)
T ss_dssp -----SSCC--TTCSEEECCSSCCC--------------CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEE
T ss_pred -----hhhc--CcCCEEECCCCcCc--------------ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEE
Confidence 2222 57888888866654 66777778888888888888888 56665 77788888888
Q ss_pred cccCcCCCCCCC
Q 047790 601 LADNRLEGEVPR 612 (885)
Q Consensus 601 l~~N~l~~~~p~ 612 (885)
+++|++.+.+|.
T Consensus 504 l~~N~~~c~c~~ 515 (562)
T 3a79_B 504 LHDNPWDCTCPG 515 (562)
T ss_dssp CCSCCBCCCHHH
T ss_pred ecCCCcCCCcch
Confidence 888887765553
No 23
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2.3e-46 Score=439.59 Aligned_cols=461 Identities=20% Similarity=0.184 Sum_probs=360.5
Q ss_pred CCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEcc
Q 047790 89 SLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFS 168 (885)
Q Consensus 89 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 168 (885)
..+++|+++|++++ +|..+. ++|++|+|++|+|++..|..|+.+++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 32 ~~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 108 (562)
T 3a79_B 32 LESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVS 108 (562)
T ss_dssp -CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECT
T ss_pred CCcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECC
Confidence 34889999999985 666654 789999999999998777889999999999999999998888889999999999999
Q ss_pred CCcCCccCCcccCCCCCCccccccccccCCCCCc-ccccccccccEEEeecccCcccCCccccCCCcccceecccccccc
Q 047790 169 GNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPV-SLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQL 247 (885)
Q Consensus 169 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~ 247 (885)
+|+|+ .+|.. .+++|++|+|++|+++ .+|. ..|+++++|++|++++|++++. .+..
T Consensus 109 ~N~l~-~lp~~--~l~~L~~L~Ls~N~l~-~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~---------------- 165 (562)
T 3a79_B 109 HNRLQ-NISCC--PMASLRHLDLSFNDFD-VLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLP---------------- 165 (562)
T ss_dssp TSCCC-EECSC--CCTTCSEEECCSSCCS-BCCCCGGGGGCTTCCEEEEECSBCCTT---TTGG----------------
T ss_pred CCcCC-ccCcc--ccccCCEEECCCCCcc-ccCchHhhcccCcccEEecCCCccccC---chhh----------------
Confidence 99998 56665 7889999999999987 4442 3488889999999999888631 1111
Q ss_pred cccccccCccccCCCCCcEEEecCCcc--cccccccccCCC-CCcEEEccCCCCcCcccc-cccccCCcceeeccccc--
Q 047790 248 SLFVGRITPEIGNCSMLKYISLSNNKL--SGPIPRELCNSG-SLVEINLDGNMLSGTIED-VFDRCTNLSELVLVNNR-- 321 (885)
Q Consensus 248 ~~~~~~~~~~l~~l~~L~~L~Ls~N~l--~~~~p~~l~~l~-~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~-- 321 (885)
+.++ +|++|++++|++ ++..|..+..+. ....+++++|.+.+..++ .+..+++|+.|++++|+
T Consensus 166 ----------l~~L-~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 234 (562)
T 3a79_B 166 ----------VAHL-HLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDEN 234 (562)
T ss_dssp ----------GTTS-CEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTT
T ss_pred ----------hhhc-eeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccc
Confidence 1222 359999999999 888888887765 223668899998875544 56788999999999985
Q ss_pred ---cCCCCCcccCCCCceeEEeecCccccccC----ccccCccccceeecccccccCCCcccc-----cccccccEEEcc
Q 047790 322 ---ISGSIPEYISELPLKVFDLQYNNFTGVIP----VSLWNSENLMEFNAASNLLEGSLSWEI-----SNAVALEKLDLS 389 (885)
Q Consensus 322 ---l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~l~~N~l~~~~~~~~-----~~l~~L~~L~Ls 389 (885)
+.+.++.......++.++++++.+++... ..+ ...+|++|++++|.+.+.+|..+ ..++.|+.++++
T Consensus 235 ~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~ 313 (562)
T 3a79_B 235 CQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVK 313 (562)
T ss_dssp HHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEE
T ss_pred cchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhcc
Confidence 22222221122257777777776654321 122 23489999999999998888877 778888888888
Q ss_pred CCcccccCc-cccccc---ccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhc
Q 047790 390 SNMLTRQIP-KKIGNL---TNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSL 465 (885)
Q Consensus 390 ~N~l~~~~p-~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l 465 (885)
.|.+ .+| ..+..+ .+|+.|++++|.+.... ....+++|++|++++|+++ +.+|..+
T Consensus 314 ~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~----------------~~~~~~~ 373 (562)
T 3a79_B 314 NQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFT----------------DSVFQGC 373 (562)
T ss_dssp ECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCC----------------TTTTTTC
T ss_pred ccee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccc----------------cchhhhh
Confidence 8887 344 344333 57999999999886432 2267889999999988874 4678899
Q ss_pred ccCCCCCEEeccCccccCC--CCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCC
Q 047790 466 SRLTNLTTLNLFGNLLTGS--IPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCN 543 (885)
Q Consensus 466 ~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N 543 (885)
.++++|+.|++++|++++. +|..+..+++|+.|++++|++++.+| +..|..+++|+.|+|++|
T Consensus 374 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~---------------~~~~~~l~~L~~L~l~~n 438 (562)
T 3a79_B 374 STLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAY---------------DRTCAWAESILVLNLSSN 438 (562)
T ss_dssp CSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCS---------------SCCCCCCTTCCEEECCSS
T ss_pred cccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccC---------------hhhhcCcccCCEEECCCC
Confidence 9999999999999999963 35678999999999999999997553 345888999999999955
Q ss_pred CCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCC-Cccccccccc
Q 047790 544 ELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPR-SGICQNLSII 622 (885)
Q Consensus 544 ~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~ 622 (885)
+ +++.+|..+. ++|++|+|++|+++ .+|..+..+++|++|++++|+|++.++. ...+.+++.+
T Consensus 439 ~-------------l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L 502 (562)
T 3a79_B 439 M-------------LTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYI 502 (562)
T ss_dssp C-------------CCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCE
T ss_pred C-------------CCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEE
Confidence 5 4456676654 79999999999999 8999999999999999999999976555 5677889999
Q ss_pred cccCCccccccccCCccccccc
Q 047790 623 SLTGNKDLCEKIMGSDCQILTF 644 (885)
Q Consensus 623 ~~~~N~~~c~~~~~~~c~~~~~ 644 (885)
++++|||.| +|...|+
T Consensus 503 ~l~~N~~~c------~c~~~~~ 518 (562)
T 3a79_B 503 WLHDNPWDC------TCPGIRY 518 (562)
T ss_dssp ECCSCCBCC------CHHHHHH
T ss_pred EecCCCcCC------CcchHHH
Confidence 999999999 8987765
No 24
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.2e-44 Score=430.28 Aligned_cols=493 Identities=21% Similarity=0.210 Sum_probs=394.5
Q ss_pred cEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeee
Q 047790 65 RVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLR 144 (885)
Q Consensus 65 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 144 (885)
.++.|||+++.+++-.+.++.++++|++|||++|.|++..|.+|++|++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 68899999999997666789999999999999999998888899999999999999999997777889999999999999
Q ss_pred ccCCCCCCCccccCCccCceEEccCCcCCc-cCCcccCCCCCCccccccccccCCCCCccccccccccc----EEEeecc
Q 047790 145 SNSFTGEMPSELGDIKQLKSLDFSGNGLNG-TIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLS----YLDVSNN 219 (885)
Q Consensus 145 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~----~L~Ls~N 219 (885)
+|++++..+..|+++++|++|+|++|++++ ..|..++.+++|++|+|++|+++ .++...+..+.+++ .++++.|
T Consensus 133 ~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ-SIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCC-EECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccc-ccccccccchhhhhhhhhhhhcccC
Confidence 999998777889999999999999999986 46788999999999999999998 55555577666544 6889999
Q ss_pred cCcccCCccccCCCcccceecccccccccc--------------------------cccccCccccCCCCCcEEEecCCc
Q 047790 220 LLSGNIPPEIGNLKKLSDLYLGIGPYQLSL--------------------------FVGRITPEIGNCSMLKYISLSNNK 273 (885)
Q Consensus 220 ~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~--------------------------~~~~~~~~l~~l~~L~~L~Ls~N~ 273 (885)
.++...+..+.. ..+..+++..|...... ........+..+..+...++..+.
T Consensus 212 ~l~~i~~~~~~~-~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~ 290 (635)
T 4g8a_A 212 PMNFIQPGAFKE-IRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 290 (635)
T ss_dssp CCCEECTTTTTT-CEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEEC
T ss_pred cccccCcccccc-hhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence 998655444433 34445554333211000 001111223334444444444433
Q ss_pred ccc---cccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccC
Q 047790 274 LSG---PIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIP 350 (885)
Q Consensus 274 l~~---~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p 350 (885)
... ..+..+....+++.+++.++.+....+ +.....|+.|++++|.+.+..+..+. .++.++++.|.+....
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~--~~~~~~L~~L~l~~~~~~~~~~~~l~--~L~~l~l~~n~~~~~~- 365 (635)
T 4g8a_A 291 LDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKD--FSYNFGWQHLELVNCKFGQFPTLKLK--SLKRLTFTSNKGGNAF- 365 (635)
T ss_dssp CCSCEEECTTTTGGGTTCSEEEEESCEEEECGG--GGSCCCCSEEEEESCEESSCCCCBCT--TCCEEEEESCCSCCBC-
T ss_pred hcccccchhhhhhhhcccccccccccccccccc--cccchhhhhhhcccccccCcCcccch--hhhhcccccccCCCCc-
Confidence 221 233445667789999999998876544 55678899999999999866554332 6889999999887543
Q ss_pred ccccCccccceeecccccccC--CCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCC-CccCC
Q 047790 351 VSLWNSENLMEFNAASNLLEG--SLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIP-MEFGD 427 (885)
Q Consensus 351 ~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~ 427 (885)
....+++|+.+++++|.+.. ..+..+..+.+|+.|+++.|.+.. .+..+..+++|+.++++.|+.....+ ..|..
T Consensus 366 -~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~ 443 (635)
T 4g8a_A 366 -SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLS 443 (635)
T ss_dssp -CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTT
T ss_pred -ccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhcccccccccccccc
Confidence 34578999999999998863 456667788899999999999975 56678899999999999998876654 57889
Q ss_pred CCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccc-cCCCCCCcccccccceeeeccccce
Q 047790 428 CISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLL-TGSIPPEFGDSLKVQGLYLGHNQLT 506 (885)
Q Consensus 428 l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~ 506 (885)
+++++.++++.|.++ +..|..+..++.|+.|++++|.+ .+..|..|..+++|+.|+|++|+++
T Consensus 444 l~~l~~l~ls~n~l~----------------~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~ 507 (635)
T 4g8a_A 444 LRNLIYLDISHTHTR----------------VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE 507 (635)
T ss_dssp CTTCCEEECTTSCCE----------------ECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCC
T ss_pred ccccccccccccccc----------------cccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccC
Confidence 999999999998884 46678889999999999999985 4457889999999999999999999
Q ss_pred eccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCC
Q 047790 507 GSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHI 586 (885)
Q Consensus 507 g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~i 586 (885)
+.+ |.+|.++++|+.|+|++|+|+ +..|..+.++++|++|||++|+|++.+
T Consensus 508 ~l~----------------~~~f~~l~~L~~L~Ls~N~l~-------------~l~~~~~~~l~~L~~L~Ls~N~l~~~~ 558 (635)
T 4g8a_A 508 QLS----------------PTAFNSLSSLQVLNMSHNNFF-------------SLDTFPYKCLNSLQVLDYSLNHIMTSK 558 (635)
T ss_dssp EEC----------------TTTTTTCTTCCEEECTTSCCC-------------BCCCGGGTTCTTCCEEECTTSCCCBCC
T ss_pred CcC----------------hHHHcCCCCCCEEECCCCcCC-------------CCChhHHhCCCCCCEEECCCCcCCCCC
Confidence 765 788999999999999965554 455778999999999999999999999
Q ss_pred CccccCc-cccceeecccCcCCCCCC
Q 047790 587 PEKLCSL-PYLLYLNLADNRLEGEVP 611 (885)
Q Consensus 587 p~~l~~l-~~L~~L~l~~N~l~~~~p 611 (885)
|..+..+ ++|++|+|++|++.+...
T Consensus 559 ~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 559 KQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp SSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred HHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 9999988 689999999999988654
No 25
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.6e-43 Score=382.58 Aligned_cols=291 Identities=29% Similarity=0.513 Sum_probs=247.2
Q ss_pred CCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcc--cCCccccC----CcEEEEEEecccccc--cccccccCCCCCCEE
Q 047790 22 DEPKQERRSLVHFKNSLQNPQVLSGWNKTTRHCH--WFGVKCRH----SRVVSLVIQTQSLKG--PVSPFLFNLSSLRIL 93 (885)
Q Consensus 22 ~~~~~~~~aLl~~k~~~~~~~~~~~w~~~~~~c~--w~gv~c~~----~~v~~l~l~~~~l~g--~~~~~l~~l~~L~~L 93 (885)
.|.++|++||++||+++.++..+++|..++|||. |.||+|+. .+|+.++++++++.| .+|+.+.++++|++|
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L 81 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFL 81 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEE
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCee
Confidence 5999999999999999988778999988889999 99999985 589999999999999 899999999999999
Q ss_pred ecCC-CcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcC
Q 047790 94 DLSK-NLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGL 172 (885)
Q Consensus 94 ~Ls~-n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 172 (885)
+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|+.+++|++|+|++|.+++.+|..++.+++|++|+|++|++
T Consensus 82 ~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 161 (313)
T 1ogq_A 82 YIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRI 161 (313)
T ss_dssp EEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCC
T ss_pred eCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcc
Confidence 9995 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCcccCCCC-CCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccc
Q 047790 173 NGTIPSRLGDLT-QLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFV 251 (885)
Q Consensus 173 ~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~ 251 (885)
++.+|..+..++ +|++|++++|++++.+|.. +..++ |++|++++|++++..|..+..+++|+.|+++.|.. .
T Consensus 162 ~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~-~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l-----~ 234 (313)
T 1ogq_A 162 SGAIPDSYGSFSKLFTSMTISRNRLTGKIPPT-FANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSL-----A 234 (313)
T ss_dssp EEECCGGGGCCCTTCCEEECCSSEEEEECCGG-GGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEE-----C
T ss_pred cCcCCHHHhhhhhcCcEEECcCCeeeccCChH-HhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCce-----e
Confidence 999999999998 9999999999999878776 77776 99999999999988777777777777777755542 1
Q ss_pred cccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccc
Q 047790 252 GRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNR 321 (885)
Q Consensus 252 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 321 (885)
+. ++.+..+++|++|++++|++++.+|..+..+++|++|+|++|++++.+|.. ..+++|+.|++++|+
T Consensus 235 ~~-~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 235 FD-LGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp CB-GGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred ee-cCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 22 223566666777777777776666666666666777777777666666654 556666666666665
No 26
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=6.5e-43 Score=399.80 Aligned_cols=390 Identities=23% Similarity=0.263 Sum_probs=269.1
Q ss_pred CCCcccCC--ccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCC
Q 047790 51 TRHCHWFG--VKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSI 128 (885)
Q Consensus 51 ~~~c~w~g--v~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 128 (885)
...|.|.+ |.|+...+ + .+|. + .++|++|||++|.+++..|..|+++++|++|+|++|.+.+.+
T Consensus 5 ~~~c~~~~~~~~c~~~~l----------~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i 70 (455)
T 3v47_A 5 TSECSVIGYNAICINRGL----------H-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVI 70 (455)
T ss_dssp --CCEEETTEEECCSSCC----------S-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEE
T ss_pred cceeEEEccccCcCCCCc----------c-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceE
Confidence 34566665 56654332 2 3444 2 278999999999999988999999999999999999998666
Q ss_pred -CccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcc--cCCCCCCccccccccccCCCCCcccc
Q 047790 129 -PSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSR--LGDLTQLQDLDLSDNLLSGSLPVSLL 205 (885)
Q Consensus 129 -p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p~~~~ 205 (885)
|..|..+++|++|+|++|++++..|..|+++++|++|+|++|++++..|.. |.++++|++|+|++|++++..|...+
T Consensus 71 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 150 (455)
T 3v47_A 71 RNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFF 150 (455)
T ss_dssp CTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGG
T ss_pred CcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCccccc
Confidence 567999999999999999999888999999999999999999999755544 99999999999999999966677778
Q ss_pred cccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCccccccccc----
Q 047790 206 KNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRE---- 281 (885)
Q Consensus 206 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~---- 281 (885)
.++++|++|++++|++++..|..+..+. ..+|+.|++++|.+.+..+..
T Consensus 151 ~~l~~L~~L~L~~n~l~~~~~~~l~~l~---------------------------~~~L~~L~l~~n~l~~~~~~~~~~~ 203 (455)
T 3v47_A 151 LNMRRFHVLDLTFNKVKSICEEDLLNFQ---------------------------GKHFTLLRLSSITLQDMNEYWLGWE 203 (455)
T ss_dssp GGCTTCCEEECTTCCBSCCCTTTSGGGT---------------------------TCEEEEEECTTCBCTTCSTTCTTHH
T ss_pred CCCCcccEEeCCCCcccccChhhhhccc---------------------------cccccccccccCcccccchhhcccc
Confidence 9999999999999999987777665541 124566666666666544332
Q ss_pred ----ccCCCCCcEEEccCCCCcCccccccccc---CCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCcccc
Q 047790 282 ----LCNSGSLVEINLDGNMLSGTIEDVFDRC---TNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLW 354 (885)
Q Consensus 282 ----l~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~ 354 (885)
+..+++|++|++++|.+++..+..+... ++|+.|++++|.+.+... ..+.+....+..+.
T Consensus 204 ~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~-------------~~~~~~~~~~~~~~ 270 (455)
T 3v47_A 204 KCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSF-------------GHTNFKDPDNFTFK 270 (455)
T ss_dssp HHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCT-------------TCCSSCCCCTTTTG
T ss_pred ccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecccccccccc-------------chhhhccCcccccc
Confidence 2245667777777777776666655444 667777777776553211 11222222222222
Q ss_pred Cc--cccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCccc
Q 047790 355 NS--ENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLN 432 (885)
Q Consensus 355 ~l--~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 432 (885)
.+ ++|+.|++++|.+.+..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|+++++.|..|..+++|+
T Consensus 271 ~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 350 (455)
T 3v47_A 271 GLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLE 350 (455)
T ss_dssp GGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCC
T ss_pred cccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCC
Confidence 22 4556666666666655565666666666666666666666666666666666666666666665566666666666
Q ss_pred EEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccc
Q 047790 433 TLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIP 510 (885)
Q Consensus 433 ~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p 510 (885)
+|+|++|+++ +..|..+..+++|++|+|++|++++..+..|..+++|+.|++++|++++.+|
T Consensus 351 ~L~Ls~N~l~----------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 351 VLDLSYNHIR----------------ALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp EEECCSSCCC----------------EECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred EEECCCCccc----------------ccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 6666666553 2345556666666666666666665444455666666666666666665553
No 27
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1e-42 Score=394.84 Aligned_cols=409 Identities=25% Similarity=0.293 Sum_probs=166.7
Q ss_pred ccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccc-------------cEeeeeccCC
Q 047790 82 PFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRL-------------ETISLRSNSF 148 (885)
Q Consensus 82 ~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-------------~~L~Ls~N~l 148 (885)
|.-...++|++|++++|.+ +.+|++|+++++|++|++++|+++|.+|..++.+++| ++|++++|.+
T Consensus 5 p~~~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l 83 (454)
T 1jl5_A 5 PRNVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGL 83 (454)
T ss_dssp ------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCC
T ss_pred ccccccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcc
Confidence 3334557777777777777 6777777777777777777777777777777777765 5555555555
Q ss_pred CCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCcc
Q 047790 149 TGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPE 228 (885)
Q Consensus 149 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 228 (885)
++ +|.. .++|++|++++|++++ +|.. +++|++|++++|+++ .+|.. .++|++|++++|++++ +|
T Consensus 84 ~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~-~l~~~----~~~L~~L~L~~n~l~~-lp-- 147 (454)
T 1jl5_A 84 SS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLK-ALSDL----PPLLEYLGVSNNQLEK-LP-- 147 (454)
T ss_dssp SC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS-CCCSC----CTTCCEEECCSSCCSS-CC--
T ss_pred cc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccC-cccCC----CCCCCEEECcCCCCCC-Cc--
Confidence 42 2221 1345555555555553 3332 244555555555554 23321 1345555555555543 33
Q ss_pred ccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccc
Q 047790 229 IGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDR 308 (885)
Q Consensus 229 ~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 308 (885)
.++++++|++|++++|++++ +|..+ .+|++|++++|++++. | .+..
T Consensus 148 ----------------------------~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l-~-~~~~ 193 (454)
T 1jl5_A 148 ----------------------------ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEEL-P-ELQN 193 (454)
T ss_dssp ----------------------------CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSSC-C-CCTT
T ss_pred ----------------------------ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCcC-c-cccC
Confidence 24444455555555555553 33322 3555555555555543 2 2455
Q ss_pred cCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEc
Q 047790 309 CTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDL 388 (885)
Q Consensus 309 l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 388 (885)
+++|++|++++|++++ +|... ..|++|++++|+++ .+| .+..+++|++|++++|++.+. |.. .++|++|++
T Consensus 194 l~~L~~L~l~~N~l~~-l~~~~--~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l-~~~---~~~L~~L~l 264 (454)
T 1jl5_A 194 LPFLTAIYADNNSLKK-LPDLP--LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTL-PDL---PPSLEALNV 264 (454)
T ss_dssp CTTCCEEECCSSCCSS-CCCCC--TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSC-CSC---CTTCCEEEC
T ss_pred CCCCCEEECCCCcCCc-CCCCc--CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCcc-ccc---ccccCEEEC
Confidence 5555555555555553 22221 14555555555555 333 255555666666666655542 221 245666666
Q ss_pred cCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccC
Q 047790 389 SSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRL 468 (885)
Q Consensus 389 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l 468 (885)
++|++++ +|.. +++|+.|++++|++++. |.. .++|++|++++|++++. + .+
T Consensus 265 ~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~i-----------------~----~~ 315 (454)
T 1jl5_A 265 RDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRSL-----------------C----DL 315 (454)
T ss_dssp CSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSEE-----------------C----CC
T ss_pred CCCcccc-cCcc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCcc-----------------c----CC
Confidence 6666654 3332 25566666666666642 211 14566666666665421 1 11
Q ss_pred -CCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCC
Q 047790 469 -TNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDG 547 (885)
Q Consensus 469 -~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 547 (885)
++|+.|++++|++++ +|.. +++|+.|++++|++++ + |. .+++|+.|+|++|++++
T Consensus 316 ~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-l----------------p~---~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 316 PPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-V----------------PE---LPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-C----------------CC---CCTTCCEEECCSSCCSS
T ss_pred cCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-c----------------cc---hhhhccEEECCCCCCCc
Confidence 345555555555553 3433 2445555555555541 2 22 24455555555555544
Q ss_pred cee-----eeecccccccccchhccCcccccccccccccCCC--CCCccccCccccceeecccCcCCCCCCC
Q 047790 548 IVG-----LYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDG--HIPEKLCSLPYLLYLNLADNRLEGEVPR 612 (885)
Q Consensus 548 ~~~-----l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~--~ip~~l~~l~~L~~L~l~~N~l~~~~p~ 612 (885)
+.. ..+..|.+.|.+|.. +++|++||+++|++++ .+|.+ ++.|.+.+|.+.+.+|.
T Consensus 372 l~~ip~~l~~L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~s------l~~L~~~~~~~~~~~~~ 434 (454)
T 1jl5_A 372 FPDIPESVEDLRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPES------VEDLRMNSERVVDPYEF 434 (454)
T ss_dssp CCCCCTTCCEEECCC---------------------------------------------------------
T ss_pred CCCChHHHHhhhhcccccccccc---cCcCCEEECCCCcCCccccchhh------HhheeCcCcccCCcccc
Confidence 211 122345566666653 4788888999998887 66654 55667788888776553
No 28
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.2e-42 Score=367.29 Aligned_cols=201 Identities=24% Similarity=0.340 Sum_probs=181.2
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
.+|++.++||+|+||.||+|++. +++.||+|++.+.. ....+.+.+|++++++++||||+++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 56999999999999999999875 58999999997542 234578999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC-
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE- 815 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~- 815 (885)
||++||+|.+++...+ .+++..++.++.|++.|++||| ++||+||||||+||+++.++.+||+|||+|+.+....
T Consensus 112 Ey~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 9999999999998654 4999999999999999999999 9999999999999999999999999999998875432
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
........||+.|+|||++.+..|+.++||||+||++|||++|+.||...
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~ 237 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 237 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 23344568999999999999999999999999999999999999999753
No 29
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=3.3e-42 Score=369.55 Aligned_cols=198 Identities=25% Similarity=0.326 Sum_probs=180.2
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..|++.++||+|+||.||+|++. +|+.||+|++........+.+.+|++++++++||||+++++++.+++..|+||||+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 34899999999999999999875 58999999997665555677899999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
+||+|.+++... .+++..+..++.|++.|++||| ++||+||||||+||+++.++.+||+|||+|+.+.... ...
T Consensus 154 ~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-~~~ 227 (346)
T 4fih_A 154 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRR 227 (346)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-CCB
T ss_pred CCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC-Ccc
Confidence 999999999753 4999999999999999999999 9999999999999999999999999999998875432 233
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
....||+.|+|||++.+..|+.++||||+||++|||++|+.||..
T Consensus 228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~ 272 (346)
T 4fih_A 228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 272 (346)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 456899999999999999999999999999999999999999964
No 30
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2e-41 Score=387.37 Aligned_cols=396 Identities=18% Similarity=0.165 Sum_probs=239.4
Q ss_pred CEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccC-CcccCCCCCCccccccc
Q 047790 115 KMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTI-PSRLGDLTQLQDLDLSD 193 (885)
Q Consensus 115 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~ 193 (885)
+.++.+++.++ .+|. + .++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|++
T Consensus 13 ~~~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp TEEECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred cccCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 34556666665 4454 2 255666666666666555666666666666666666665333 34555666666666666
Q ss_pred cccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCc
Q 047790 194 NLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNK 273 (885)
Q Consensus 194 N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~ 273 (885)
|++++..| ..++++++|++|++++|++++.+|.. ..+..+++|++|++++|+
T Consensus 89 n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~---------------------------~~~~~l~~L~~L~L~~n~ 140 (455)
T 3v47_A 89 NQFLQLET-GAFNGLANLEVLTLTQCNLDGAVLSG---------------------------NFFKPLTSLEMLVLRDNN 140 (455)
T ss_dssp CTTCEECT-TTTTTCTTCCEEECTTSCCBTHHHHS---------------------------STTTTCTTCCEEECCSSB
T ss_pred CccCccCh-hhccCcccCCEEeCCCCCCCccccCc---------------------------ccccCcccCCEEECCCCc
Confidence 66552222 23555555555555555554321110 114455666666667777
Q ss_pred cccccccc-ccCCCCCcEEEccCCCCcCccccccccc--CCcceeeccccccCCCCCcccCCCCceeEEeecCccccccC
Q 047790 274 LSGPIPRE-LCNSGSLVEINLDGNMLSGTIEDVFDRC--TNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIP 350 (885)
Q Consensus 274 l~~~~p~~-l~~l~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p 350 (885)
+++..|.. +..+++|++|++++|.+++..+..+..+ .+|+.|++++|.+.+..+..+.. ...
T Consensus 141 l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~---------------~~~ 205 (455)
T 3v47_A 141 IKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW---------------EKC 205 (455)
T ss_dssp CCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH---------------HHH
T ss_pred cCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccc---------------ccc
Confidence 66665554 5666666666666666666666555544 44555555555555433322110 000
Q ss_pred ccccCccccceeecccccccCCCccccccc---ccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCC
Q 047790 351 VSLWNSENLMEFNAASNLLEGSLSWEISNA---VALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGD 427 (885)
Q Consensus 351 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 427 (885)
..+..+++|++|++++|.+.+..|..+... ++|+.|++++|.+.+. .+..+.+.+..+..+..
T Consensus 206 ~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~--------------~~~~~~~~~~~~~~~~~ 271 (455)
T 3v47_A 206 GNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGS--------------SFGHTNFKDPDNFTFKG 271 (455)
T ss_dssp CCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSC--------------CTTCCSSCCCCTTTTGG
T ss_pred ccccccceeeeEecCCCcccccchhhhhccccccceeeEeecccccccc--------------ccchhhhccCccccccc
Confidence 111223334444444444433333333322 4455555555544321 11122222222333333
Q ss_pred C--CcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccc
Q 047790 428 C--ISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQL 505 (885)
Q Consensus 428 l--~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 505 (885)
+ ++|++|++++|+++ +..|..+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++
T Consensus 272 ~~~~~L~~L~l~~n~l~----------------~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 335 (455)
T 3v47_A 272 LEASGVKTCDLSKSKIF----------------ALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFL 335 (455)
T ss_dssp GTTSCCCEEECCSSCCC----------------EECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred ccccCceEEEecCcccc----------------ccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCcc
Confidence 2 56777777777764 45677788888888888888888887888888888999999998888
Q ss_pred eeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCC
Q 047790 506 TGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGH 585 (885)
Q Consensus 506 ~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ 585 (885)
++.. |..|+.+++|+.|+|++|++ ++..|..++.+++|++|+|++|++++.
T Consensus 336 ~~~~----------------~~~~~~l~~L~~L~Ls~N~l-------------~~~~~~~~~~l~~L~~L~L~~N~l~~~ 386 (455)
T 3v47_A 336 GSID----------------SRMFENLDKLEVLDLSYNHI-------------RALGDQSFLGLPNLKELALDTNQLKSV 386 (455)
T ss_dssp CEEC----------------GGGGTTCTTCCEEECCSSCC-------------CEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCcC----------------hhHhcCcccCCEEECCCCcc-------------cccChhhccccccccEEECCCCccccC
Confidence 7544 67788889999999985554 445678888899999999999999865
Q ss_pred CCccccCccccceeecccCcCCCCCCCCccc
Q 047790 586 IPEKLCSLPYLLYLNLADNRLEGEVPRSGIC 616 (885)
Q Consensus 586 ip~~l~~l~~L~~L~l~~N~l~~~~p~~~~~ 616 (885)
.+..+..+++|++|++++|++++.+|....+
T Consensus 387 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l 417 (455)
T 3v47_A 387 PDGIFDRLTSLQKIWLHTNPWDCSCPRIDYL 417 (455)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCCTTTTHHH
T ss_pred CHhHhccCCcccEEEccCCCcccCCCcchHH
Confidence 5556788999999999999999988865433
No 31
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.2e-41 Score=386.07 Aligned_cols=391 Identities=26% Similarity=0.345 Sum_probs=258.8
Q ss_pred CcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccC-------------ceEEccCCcCCccC
Q 047790 110 NLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQL-------------KSLDFSGNGLNGTI 176 (885)
Q Consensus 110 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L-------------~~L~Ls~N~l~~~~ 176 (885)
..+.|++|++++|.+ +.+|++|+.+++|++|++++|.++|.+|.+++++++| ++|++++|++++ +
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-l 86 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-L 86 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-C
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-C
Confidence 468999999999999 7999999999999999999999999999999999886 666666666663 3
Q ss_pred CcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCc
Q 047790 177 PSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITP 256 (885)
Q Consensus 177 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~ 256 (885)
|.. .++|++|++++|++++ +|.. .++|++|++++|++++ +|.
T Consensus 87 p~~---~~~L~~L~l~~n~l~~-lp~~----~~~L~~L~l~~n~l~~------------------------------l~~ 128 (454)
T 1jl5_A 87 PEL---PPHLESLVASCNSLTE-LPEL----PQSLKSLLVDNNNLKA------------------------------LSD 128 (454)
T ss_dssp CSC---CTTCSEEECCSSCCSS-CCCC----CTTCCEEECCSSCCSC------------------------------CCS
T ss_pred CCC---cCCCCEEEccCCcCCc-cccc----cCCCcEEECCCCccCc------------------------------ccC
Confidence 331 2456666666666663 5532 2556666666665542 111
Q ss_pred cccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC-Cc
Q 047790 257 EIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PL 335 (885)
Q Consensus 257 ~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L 335 (885)
. .++|++|++++|++++ +| .++.+++|++|++++|++++.+ .. ..+|++|++++|++++ +|. +..+ .|
T Consensus 129 ~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~lp-~~---~~~L~~L~L~~n~l~~-l~~-~~~l~~L 197 (454)
T 1jl5_A 129 L---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKKLP-DL---PPSLEFIAAGNNQLEE-LPE-LQNLPFL 197 (454)
T ss_dssp C---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSCCC-CC---CTTCCEEECCSSCCSS-CCC-CTTCTTC
T ss_pred C---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcccC-CC---cccccEEECcCCcCCc-Ccc-ccCCCCC
Confidence 1 1579999999999996 67 6999999999999999999754 33 3699999999999997 564 5555 79
Q ss_pred eeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccc
Q 047790 336 KVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSN 415 (885)
Q Consensus 336 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 415 (885)
++|++++|++++. |... ++|++|++++|.+. .+| .+..+++|++|++++|++++ +|.. +++|+.|++++|
T Consensus 198 ~~L~l~~N~l~~l-~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N 267 (454)
T 1jl5_A 198 TAIYADNNSLKKL-PDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDN 267 (454)
T ss_dssp CEEECCSSCCSSC-CCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSS
T ss_pred CEEECCCCcCCcC-CCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCC
Confidence 9999999999974 4332 58999999999998 556 48999999999999999986 4543 479999999999
Q ss_pred cccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCccccccc
Q 047790 416 FFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKV 495 (885)
Q Consensus 416 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 495 (885)
++++ +|.. .++|++|++++|++++.. .+| ++|+.|++++|++++ ++.. ..+|
T Consensus 268 ~l~~-l~~~---~~~L~~L~ls~N~l~~l~--------------~~~------~~L~~L~l~~N~l~~-i~~~---~~~L 319 (454)
T 1jl5_A 268 YLTD-LPEL---PQSLTFLDVSENIFSGLS--------------ELP------PNLYYLNASSNEIRS-LCDL---PPSL 319 (454)
T ss_dssp CCSC-CCCC---CTTCCEEECCSSCCSEES--------------CCC------TTCCEEECCSSCCSE-ECCC---CTTC
T ss_pred cccc-cCcc---cCcCCEEECcCCccCccc--------------CcC------CcCCEEECcCCcCCc-ccCC---cCcC
Confidence 9997 5554 378999999999987421 122 689999999999985 3321 1489
Q ss_pred ceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCccccccc
Q 047790 496 QGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYL 575 (885)
Q Consensus 496 ~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L 575 (885)
+.|++++|++++ + |.. +++|+.|++++|+++ .+|. .+++|++|
T Consensus 320 ~~L~Ls~N~l~~-l----------------p~~---~~~L~~L~L~~N~l~--------------~lp~---~l~~L~~L 362 (454)
T 1jl5_A 320 EELNVSNNKLIE-L----------------PAL---PPRLERLIASFNHLA--------------EVPE---LPQNLKQL 362 (454)
T ss_dssp CEEECCSSCCSC-C----------------CCC---CTTCCEEECCSSCCS--------------CCCC---CCTTCCEE
T ss_pred CEEECCCCcccc-c----------------ccc---CCcCCEEECCCCccc--------------cccc---hhhhccEE
Confidence 999999999985 3 333 588999999977776 4565 47899999
Q ss_pred ccccccCCC--CCCccccCc-------------cccceeecccCcCCC--CCCCCccccccccccccCCcccc
Q 047790 576 DFSMNMLDG--HIPEKLCSL-------------PYLLYLNLADNRLEG--EVPRSGICQNLSIISLTGNKDLC 631 (885)
Q Consensus 576 ~Ls~N~l~~--~ip~~l~~l-------------~~L~~L~l~~N~l~~--~~p~~~~~~~~~~~~~~~N~~~c 631 (885)
++++|++++ .+|.++..+ ++|++|++++|++++ .+|. ++..+.+.+|...|
T Consensus 363 ~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~~~~iP~-----sl~~L~~~~~~~~~ 430 (454)
T 1jl5_A 363 HVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLREFPDIPE-----SVEDLRMNSERVVD 430 (454)
T ss_dssp ECCSSCCSSCCCCCTTCCEEECCC-------------------------------------------------
T ss_pred ECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCccccchh-----hHhheeCcCcccCC
Confidence 999999998 789999888 899999999999998 5553 45566677766555
No 32
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=4e-42 Score=369.54 Aligned_cols=201 Identities=23% Similarity=0.307 Sum_probs=172.6
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
.+|++.++||+|+||.||+|++. +|+.||+|++.... ....+++.+|++++++++||||+++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 57999999999999999999875 58999999997543 2234678999999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 738 YMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 738 ~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
|++||+|.+++..+ ...+++..++.++.|++.|++||| ++||+||||||+||+++.++.+||+|||+|+......
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~- 179 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV- 179 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH-
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc-
Confidence 99999999999754 344789999999999999999999 9999999999999999999999999999998764321
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.......||+.|+|||++.+..|+.++||||+||++|||++|+.||...
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~ 228 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG 228 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 1223456999999999999999999999999999999999999999753
No 33
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.6e-41 Score=371.65 Aligned_cols=198 Identities=25% Similarity=0.326 Sum_probs=180.2
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..|++.++||+|+||.||+|++. +|+.||+|++........+.+.+|+++++.++||||+++++++.+++..|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 35999999999999999999875 58999999998666555677899999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
+||+|.+++... .+++..+..++.|++.||+||| ++||+||||||+|||++.++.+||+|||+|+.+.... ...
T Consensus 231 ~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~-~~~ 304 (423)
T 4fie_A 231 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRR 304 (423)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC-CCB
T ss_pred CCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC-ccc
Confidence 999999999753 4899999999999999999999 9999999999999999999999999999998875432 233
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
....||+.|||||++.+..|+.++||||+||++|||++|+.||..
T Consensus 305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~ 349 (423)
T 4fie_A 305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 349 (423)
T ss_dssp CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 456799999999999999999999999999999999999999964
No 34
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.5e-41 Score=361.73 Aligned_cols=198 Identities=21% Similarity=0.251 Sum_probs=172.9
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..|++.++||+|+||.||+|++. +|+.||+|+++..... .+|++++++++||||+++++++.+++..|+||||+
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~-----~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-----THHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH-----HHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 46889999999999999999875 4899999999764322 46999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC-cEEEeeccCcccccCCCCC-
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF-EAKVSDFGLARLISDCESH- 817 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~-~vkl~Dfg~a~~~~~~~~~- 817 (885)
+||+|.++++..+ .+++..+..++.|++.|++||| +++|+||||||+||+++.++ .+||+|||+|+.+......
T Consensus 133 ~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 133 EGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp TTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred CCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 9999999998654 4999999999999999999999 99999999999999999887 6999999999877543211
Q ss_pred ---cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 818 ---VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 818 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
......||+.|||||++.+..|+.++||||+||++|||++|+.||.....
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~ 261 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR 261 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCC
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH
Confidence 12335799999999999999999999999999999999999999976543
No 35
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.7e-41 Score=351.23 Aligned_cols=198 Identities=21% Similarity=0.378 Sum_probs=163.0
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
+++|++.+.||+|+||.||+|++. +++.||+|++.+.. .....++.+|++++++++||||+++++++.+++..|+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 468999999999999999999875 58999999997543 23356799999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+ +|+|.+++..+. .+++..+..++.|++.|++||| ++||+||||||+||+++.++.+||+|||+|+......
T Consensus 92 mEy~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred EeCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 9999 679999988654 5999999999999999999999 9999999999999999999999999999998765422
Q ss_pred CCcccCCCCCCccCCcccccCCCC-CCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||..
T Consensus 167 --~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~ 214 (275)
T 3hyh_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred --ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC
Confidence 2234679999999999998876 5799999999999999999999965
No 36
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=4e-42 Score=363.54 Aligned_cols=200 Identities=25% Similarity=0.299 Sum_probs=170.7
Q ss_pred eEEeecceecccCCceEEEEEeC----CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP----DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~----~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
.+|++.++||+|+||.||+|++. .++.||+|++++.. .....++.+|++++++++||||+++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 46999999999999999999763 36789999997543 2233468899999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||++||+|.+++.+.. .+++..+..++.|++.|++||| ++||+||||||+||+++.++.+||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 999999999999998654 4999999999999999999999 999999999999999999999999999999865442
Q ss_pred CCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
. .......||+.|+|||++.+..|+.++||||+||++|||+||+.||.+.
T Consensus 180 ~-~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~ 229 (304)
T 3ubd_A 180 E-KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK 229 (304)
T ss_dssp --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred C-ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc
Confidence 2 2334568999999999999999999999999999999999999999753
No 37
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.7e-40 Score=349.57 Aligned_cols=195 Identities=27% Similarity=0.420 Sum_probs=169.4
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEe----CCeeEE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSV----GEEKLL 734 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~----~~~~~l 734 (885)
.|+++++||+|+||.||+|.+. .++.||+|++.... ....+++.+|++++++++||||+++++++.. +...|+
T Consensus 27 ~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l 106 (290)
T 3fpq_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred eEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence 4588999999999999999875 48899999987543 2234678999999999999999999999865 346799
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCC--ceecCCCCCcEEEc-CCCcEEEeeccCcccc
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPY--IIHMDIKTSNILLN-DYFEAKVSDFGLARLI 811 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~--i~H~dlkp~Nil~~-~~~~vkl~Dfg~a~~~ 811 (885)
||||++||+|.+++.+.. .+++..+..++.|++.|++||| +++ |+||||||+||+++ .++.+||+|||+|+..
T Consensus 107 vmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 107 VTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence 999999999999998654 5899999999999999999999 888 99999999999997 4789999999999764
Q ss_pred cCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.. .......||+.|||||++.+ .|+.++||||+||++|||+||+.||..
T Consensus 183 ~~---~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~ 231 (290)
T 3fpq_A 183 RA---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSE 231 (290)
T ss_dssp CT---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CC---CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 32 22345679999999999875 699999999999999999999999964
No 38
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.4e-41 Score=358.92 Aligned_cols=202 Identities=31% Similarity=0.514 Sum_probs=176.6
Q ss_pred eEEeecceecccCCceEEEEEeC------CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~------~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
.+|.++++||+|+||.||+|++. ++..||+|+++.......+++.+|++++++++||||+++++++.+++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 45889999999999999999864 477899999987665556789999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhc------------CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEE
Q 047790 735 VYEYMVNGSLDDWLRNR------------AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKV 802 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~------------~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl 802 (885)
||||+++|+|.++++.. ...+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence 99999999999999753 245899999999999999999999 899999999999999999999999
Q ss_pred eeccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 803 SDFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 803 ~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
+|||+|+........ ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||...
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~ 234 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL 234 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 999999876543222 2233468999999999999999999999999999999999 89999753
No 39
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=357.84 Aligned_cols=201 Identities=33% Similarity=0.545 Sum_probs=170.8
Q ss_pred eEEeecceecccCCceEEEEEeC------CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~------~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
.++.+.++||+|+||.||+|+++ +++.||+|+++.......++|.+|++++++++||||+++++++.+++..|+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45788899999999999999864 477899999987665556789999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcE
Q 047790 735 VYEYMVNGSLDDWLRNRA--------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEA 800 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~--------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~v 800 (885)
||||+++|+|.++++... ..+++..+..++.|++.|++||| +++|+||||||+||++++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcE
Confidence 999999999999997532 34899999999999999999999 8999999999999999999999
Q ss_pred EEeeccCcccccCCC-CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 801 KVSDFGLARLISDCE-SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 801 kl~Dfg~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
||+|||+|+...... ........+|+.|+|||++.+..++.++|||||||++|||+| |+.||..
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~ 263 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ 263 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCC
Confidence 999999998764432 223344678999999999999999999999999999999999 8999964
No 40
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2.1e-39 Score=367.95 Aligned_cols=358 Identities=21% Similarity=0.223 Sum_probs=194.8
Q ss_pred cEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeee
Q 047790 65 RVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLR 144 (885)
Q Consensus 65 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 144 (885)
+++.++++++.+++. | .+..+++|++|+|++|.+++. | ++.+++|++|+|++|++++. | ++.+++|++|+++
T Consensus 43 ~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~ 114 (457)
T 3bz5_A 43 TLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCD 114 (457)
T ss_dssp TCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECC
T ss_pred CCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECC
Confidence 444555555555442 2 445555555555555555442 2 45555555555555555532 2 4555555555555
Q ss_pred ccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCccc
Q 047790 145 SNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGN 224 (885)
Q Consensus 145 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~ 224 (885)
+|++++ +| ++.+++|++|++++|++++. + ++++++|++|++++|+..+.++ +..+++|++|++++|++++
T Consensus 115 ~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~~---~~~l~~L~~L~ls~n~l~~- 184 (457)
T 3bz5_A 115 TNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKLD---VTPQTQLTTLDCSFNKITE- 184 (457)
T ss_dssp SSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCCC---CTTCTTCCEEECCSSCCCC-
T ss_pred CCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCcccccc---cccCCcCCEEECCCCccce-
Confidence 555553 22 45555555555555555532 1 4455555555555553333332 3445555555555555553
Q ss_pred CCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccc
Q 047790 225 IPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIED 304 (885)
Q Consensus 225 ~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 304 (885)
+| +..+++|+.|+++.|... .+ .++.+++|++|++++|++++ +| +..+++|+.|++++|++++.++
T Consensus 185 l~--l~~l~~L~~L~l~~N~l~------~~--~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~- 250 (457)
T 3bz5_A 185 LD--VSQNKLLNRLNCDTNNIT------KL--DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDV- 250 (457)
T ss_dssp CC--CTTCTTCCEEECCSSCCS------CC--CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCC-
T ss_pred ec--cccCCCCCEEECcCCcCC------ee--ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCH-
Confidence 22 444444455544433321 11 13444445555555555443 23 4444444555555554444332
Q ss_pred cccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCccccCccccceeecccccccCCCccccccccccc
Q 047790 305 VFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALE 384 (885)
Q Consensus 305 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 384 (885)
..+++|+.|++++|+ |+.|++++|.+.+.+| +..+++|+.|++++|...+.+|. ...+|+
T Consensus 251 --~~l~~L~~L~l~~n~-------------L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~ 310 (457)
T 3bz5_A 251 --STLSKLTTLHCIQTD-------------LLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGIT 310 (457)
T ss_dssp --TTCTTCCEEECTTCC-------------CSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCS
T ss_pred --HHCCCCCEEeccCCC-------------CCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcce
Confidence 233444444444432 3445566666555554 34556666666666665555443 223344
Q ss_pred EEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchh
Q 047790 385 KLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGS 464 (885)
Q Consensus 385 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~ 464 (885)
.|++++| ++|+.|++++|+|++. + +.++++|+.|++++|+|++
T Consensus 311 ~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------------------- 353 (457)
T 3bz5_A 311 ELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------------------- 353 (457)
T ss_dssp CCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB---------------------
T ss_pred Eechhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC---------------------
Confidence 4444443 6889999999999884 3 8889999999999988852
Q ss_pred cccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCC
Q 047790 465 LSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGN 519 (885)
Q Consensus 465 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n 519 (885)
++.|+.|++++|.++|. +.+..|..+++++|+++|.||..+....++
T Consensus 354 ---l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~~~~~~~ 400 (457)
T 3bz5_A 354 ---FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDLLDQFGN 400 (457)
T ss_dssp ---CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTCBCTTSC
T ss_pred ---ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChhHhcccCc
Confidence 24566677888888765 456677788888888888887665544333
No 41
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.2e-40 Score=349.97 Aligned_cols=198 Identities=28% Similarity=0.469 Sum_probs=168.0
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..+++.++||+|+||.||+|++.+ .||+|+++... ....+.+.+|++++++++||||+++++++.+ +..++||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 457789999999999999998754 58999986433 2334679999999999999999999998864 568999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC-CC
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE-SH 817 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~-~~ 817 (885)
+++|+|.+++......+++..+..++.|++.|++||| +++|+||||||+||++++++.+||+|||+|+...... ..
T Consensus 113 ~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp CSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 9999999999877677999999999999999999999 8999999999999999999999999999998764322 22
Q ss_pred cccCCCCCCccCCcccccC---CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQA---GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
......||+.|||||++.+ ..|+.++|||||||++|||+||+.||..
T Consensus 190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~ 239 (307)
T 3omv_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSH 239 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCC
Confidence 3345679999999999864 3589999999999999999999999975
No 42
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=6.1e-40 Score=349.64 Aligned_cols=202 Identities=26% Similarity=0.443 Sum_probs=175.6
Q ss_pred eEEeecceecccCCceEEEEEeC------CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~------~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
..+++.++||+|+||.||+|++. +++.||+|+++... ....++|.+|++++++++||||+++++++.+++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 34778899999999999999863 46789999997543 334578999999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC
Q 047790 734 LVYEYMVNGSLDDWLRNRA---------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF 798 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~---------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~ 798 (885)
+||||+++|+|.+++..+. ..+++..+..++.|++.|++||| +++|+||||||+||++++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCC
Confidence 9999999999999996432 34899999999999999999999 89999999999999999999
Q ss_pred cEEEeeccCcccccCCC-CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 799 EAKVSDFGLARLISDCE-SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 799 ~vkl~Dfg~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.+||+|||+|+.....+ ........+|+.|+|||++.+..++.++|||||||++|||+| |+.||.+.
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~ 251 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY 251 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCC
Confidence 99999999998764432 223344578999999999999999999999999999999998 89999753
No 43
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=7.4e-39 Score=363.54 Aligned_cols=218 Identities=20% Similarity=0.242 Sum_probs=147.8
Q ss_pred ccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCcc
Q 047790 76 LKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSE 155 (885)
Q Consensus 76 l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 155 (885)
..+..+..++++++|++|||++|.+++. | .++.+++|++|+|++|++++. | ++.+++|++|++++|++++. |
T Consensus 30 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~-- 101 (457)
T 3bz5_A 30 MQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D-- 101 (457)
T ss_dssp CCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--
T ss_pred cCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--
Confidence 3344455677778888888888887764 3 677788888888888888753 3 77777888888888887753 3
Q ss_pred ccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcc
Q 047790 156 LGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKL 235 (885)
Q Consensus 156 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 235 (885)
++.+++|++|++++|++++ +| ++.+++|++|++++|++++ ++ ++.+++|++|++++|+..+.+
T Consensus 102 ~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~---l~~l~~L~~L~l~~n~~~~~~---------- 164 (457)
T 3bz5_A 102 VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID---VSHNTQLTELDCHLNKKITKL---------- 164 (457)
T ss_dssp CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC---CTTCTTCCEEECTTCSCCCCC----------
T ss_pred cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec---cccCCcCCEEECCCCCccccc----------
Confidence 7777778888888887775 33 7777777777777777773 43 566777777777777543222
Q ss_pred cceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCccee
Q 047790 236 SDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSEL 315 (885)
Q Consensus 236 ~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 315 (885)
.+..+++|++|++++|++++ +| +..+++|+.|++++|++++. .+..+++|++|
T Consensus 165 ---------------------~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L 217 (457)
T 3bz5_A 165 ---------------------DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFL 217 (457)
T ss_dssp ---------------------CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEE
T ss_pred ---------------------ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEE
Confidence 13455677777777777775 33 66677777777777777765 25666777777
Q ss_pred eccccccCCCCCcccCCC-CceeEEeecCccccc
Q 047790 316 VLVNNRISGSIPEYISEL-PLKVFDLQYNNFTGV 348 (885)
Q Consensus 316 ~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~ 348 (885)
++++|++++ +| +..+ .|+.|++++|++++.
T Consensus 218 ~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~ 248 (457)
T 3bz5_A 218 DCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTEL 248 (457)
T ss_dssp ECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC
T ss_pred ECcCCcccc-cC--ccccCCCCEEEeeCCcCCCc
Confidence 777777765 33 3333 456666666665554
No 44
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.5e-38 Score=362.18 Aligned_cols=190 Identities=28% Similarity=0.395 Sum_probs=100.2
Q ss_pred CCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEE
Q 047790 87 LSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLD 166 (885)
Q Consensus 87 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 166 (885)
+++++.|+++++.+.. +| .+..+++|++|+|++|.+++..| ++.+++|++|++++|.+++..| ++++++|++|+
T Consensus 45 l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 45 LDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred hccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 4455556666555542 22 25555555555555555553322 5555555555555555553322 55555555555
Q ss_pred ccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceeccccccc
Q 047790 167 FSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQ 246 (885)
Q Consensus 167 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~ 246 (885)
+++|++++..+ +.++++|++|++++|.++ .++. +..+++|++|+++ |.+.
T Consensus 119 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~-~~~~--~~~l~~L~~L~l~-~~~~------------------------ 168 (466)
T 1o6v_A 119 LFNNQITDIDP--LKNLTNLNRLELSSNTIS-DISA--LSGLTSLQQLSFG-NQVT------------------------ 168 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEEEEEEEEC-CCGG--GTTCTTCSEEEEE-ESCC------------------------
T ss_pred CCCCCCCCChH--HcCCCCCCEEECCCCccC-CChh--hccCCcccEeecC-Cccc------------------------
Confidence 55555553321 455555555555555554 2331 4444444444443 2211
Q ss_pred ccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccC
Q 047790 247 LSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRIS 323 (885)
Q Consensus 247 ~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 323 (885)
.++ .+.++++|++|++++|++++. ..+..+++|++|++++|.+++..+ +..+++|++|++++|+++
T Consensus 169 ------~~~-~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~ 234 (466)
T 1o6v_A 169 ------DLK-PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK 234 (466)
T ss_dssp ------CCG-GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC
T ss_pred ------Cch-hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcc
Confidence 111 255667777777777777643 235666666666666666665554 455566666666665554
No 45
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.2e-37 Score=354.35 Aligned_cols=343 Identities=30% Similarity=0.409 Sum_probs=245.5
Q ss_pred CcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeee
Q 047790 64 SRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISL 143 (885)
Q Consensus 64 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 143 (885)
.+++.+++.+++++. +| .+..+++|++|||++|.+++..+ ++++++|++|++++|++++..| ++.+++|++|++
T Consensus 46 ~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 119 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 119 (466)
T ss_dssp HTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred ccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEEC
Confidence 368888998888764 44 47889999999999999987554 9999999999999999996655 999999999999
Q ss_pred eccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcc
Q 047790 144 RSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSG 223 (885)
Q Consensus 144 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~ 223 (885)
++|.+++..+ +..+++|++|++++|++++ ++ .+..+++|++|+++ |.+. .++. +.++++|++|++++|++++
T Consensus 120 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~-~~~~--~~~l~~L~~L~l~~n~l~~ 191 (466)
T 1o6v_A 120 FNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVT-DLKP--LANLTTLERLDISSNKVSD 191 (466)
T ss_dssp CSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCC-CCGG--GTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-Cccc-Cchh--hccCCCCCEEECcCCcCCC
Confidence 9999996533 8999999999999999985 34 48999999999997 5665 3433 8899999999999998863
Q ss_pred cCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCccc
Q 047790 224 NIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIE 303 (885)
Q Consensus 224 ~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 303 (885)
. +.+..+++|++|++++|++++..| +..+++|++|++++|.+++.
T Consensus 192 ~-------------------------------~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-- 236 (466)
T 1o6v_A 192 I-------------------------------SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI-- 236 (466)
T ss_dssp C-------------------------------GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--
T ss_pred C-------------------------------hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--
Confidence 1 124567889999999999997766 77899999999999999976
Q ss_pred ccccccCCcceeeccccccCCCCCcccCCC-CceeEEeecCccccccCccccCccccceeecccccccCCCccccccccc
Q 047790 304 DVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVA 382 (885)
Q Consensus 304 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 382 (885)
..+..+++|++|++++|++++..| +..+ .|+.|++++|++++..+ +..++ +
T Consensus 237 ~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~------------------------~ 288 (466)
T 1o6v_A 237 GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLT------------------------A 288 (466)
T ss_dssp GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCT------------------------T
T ss_pred hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCC------------------------c
Confidence 357888999999999998876544 3333 46666666666655433 44444 4
Q ss_pred ccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCc
Q 047790 383 LEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIP 462 (885)
Q Consensus 383 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p 462 (885)
|++|++++|++++..+ +..+++|+.|+|++|++++..| +..+++|++|++++|++++ +
T Consensus 289 L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-----------------~- 346 (466)
T 1o6v_A 289 LTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD-----------------V- 346 (466)
T ss_dssp CSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCC-----------------C-
T ss_pred cCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCC-----------------c-
Confidence 5555555555544322 4445555555555555554433 4455555555555555431 1
Q ss_pred hhcccCCCCCEEeccCccccCCCCCCcccccccceeeecccccee
Q 047790 463 GSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTG 507 (885)
Q Consensus 463 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 507 (885)
..+..+++|+.|++++|++++..| +..+++|+.|++++|++++
T Consensus 347 ~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 347 SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 234455555555555555554443 4555555555555555554
No 46
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.9e-38 Score=335.84 Aligned_cols=197 Identities=24% Similarity=0.358 Sum_probs=159.8
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCC--------
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGE-------- 730 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~-------- 730 (885)
.+|++.+.||+|+||.||+|++. +++.||+|+++.... ...+++.+|++++++++||||+++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 35899999999999999999875 589999999875432 23467889999999999999999999886543
Q ss_pred ----eeEEEEecccCCCHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEee
Q 047790 731 ----EKLLVYEYMVNGSLDDWLRNRAA--SLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSD 804 (885)
Q Consensus 731 ----~~~lv~e~~~~~sL~~~l~~~~~--~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~D 804 (885)
+.|+||||+++|+|.+++..+.. ..++..+..++.|+++|++||| ++||+||||||+||+++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEcc
Confidence 36899999999999999986432 2456678899999999999999 89999999999999999999999999
Q ss_pred ccCcccccCCCCC-----------cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 805 FGLARLISDCESH-----------VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 805 fg~a~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
||+|+........ ......||+.|||||++.+..|+.++||||+||++|||++ ||.
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~ 228 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFS 228 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCS
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCC
Confidence 9999876542211 1123469999999999999999999999999999999996 775
No 47
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.5e-38 Score=340.12 Aligned_cols=199 Identities=27% Similarity=0.393 Sum_probs=163.3
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCC----eeEEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE----EKLLVY 736 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~----~~~lv~ 736 (885)
.+|.++++||+|+||.||+|++ +|+.||+|+++..... ....+.|+..+.+++||||+++++++.+++ ..|+||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 4688999999999999999987 5789999999754321 233456777778899999999999987653 579999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcc-----CCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHG-----FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~-----~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
||+++|+|.++++.. .+++..+..++.|++.|++|||.. .+.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 81 Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp ECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred cCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 999999999999864 489999999999999999999931 1239999999999999999999999999999876
Q ss_pred cCCCCC---cccCCCCCCccCCcccccCC------CCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 812 SDCESH---VSTDTADTIGYVPSEYGQAG------RANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 812 ~~~~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
...... ......||+.|+|||++.+. .++.++|||||||++|||+||..||.
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~ 219 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 219 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTT
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCC
Confidence 543322 22335699999999998765 36779999999999999999988765
No 48
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=357.08 Aligned_cols=329 Identities=19% Similarity=0.156 Sum_probs=277.6
Q ss_pred CCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC-CceeEEe
Q 047790 262 SMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDL 340 (885)
Q Consensus 262 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L 340 (885)
++++.|+|++|++++..|..|..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..+..+..+ .|++|+|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 468889999999988888888899999999999999998888889999999999999999987777777776 7999999
Q ss_pred ecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCc
Q 047790 341 QYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGI 420 (885)
Q Consensus 341 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 420 (885)
++|++++..|..|..+++|++|++++|.+.+..+..|.++++|++|+|++|++++..+..+..+++|+.|+|++|.++++
T Consensus 112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~ 191 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAI 191 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEE
T ss_pred CCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEe
Confidence 99999988888999999999999999999988888899999999999999999988778899999999999999999988
Q ss_pred CCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeee
Q 047790 421 IPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYL 500 (885)
Q Consensus 421 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 500 (885)
.+..|..+++|+.|++++|.+. +.+|.......+|+.|+|++|++++..+..|..+++|+.|+|
T Consensus 192 ~~~~~~~l~~L~~L~l~~~~~~----------------~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 255 (477)
T 2id5_A 192 RDYSFKRLYRLKVLEISHWPYL----------------DTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNL 255 (477)
T ss_dssp CTTCSCSCTTCCEEEEECCTTC----------------CEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEEC
T ss_pred ChhhcccCcccceeeCCCCccc----------------cccCcccccCccccEEECcCCcccccCHHHhcCccccCeeEC
Confidence 8889999999999999988763 345555555668999999999998544467888999999999
Q ss_pred ccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccc
Q 047790 501 GHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMN 580 (885)
Q Consensus 501 s~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N 580 (885)
++|++++.. +..|..+++|+.|+|++|++ ++..|..+.++++|++|+|++|
T Consensus 256 s~n~l~~~~----------------~~~~~~l~~L~~L~L~~n~l-------------~~~~~~~~~~l~~L~~L~L~~N 306 (477)
T 2id5_A 256 SYNPISTIE----------------GSMLHELLRLQEIQLVGGQL-------------AVVEPYAFRGLNYLRVLNVSGN 306 (477)
T ss_dssp CSSCCCEEC----------------TTSCTTCTTCCEEECCSSCC-------------SEECTTTBTTCTTCCEEECCSS
T ss_pred CCCcCCccC----------------hhhccccccCCEEECCCCcc-------------ceECHHHhcCcccCCEEECCCC
Confidence 999988544 56788899999999995554 4456788899999999999999
Q ss_pred cCCCCCCccccCccccceeecccCcCCCCCCCCccccccccccccCCcccccccc
Q 047790 581 MLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNKDLCEKIM 635 (885)
Q Consensus 581 ~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~~~ 635 (885)
++++..+..+..+++|++|++++|++.+..+..+.........+.++...|..|.
T Consensus 307 ~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 307 QLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp CCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESG
T ss_pred cCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCch
Confidence 9997666678889999999999999988766554444455567788888887553
No 49
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=3.9e-38 Score=341.67 Aligned_cols=202 Identities=27% Similarity=0.406 Sum_probs=173.7
Q ss_pred eEEeecceecccCCceEEEEEeCC------CCeEEEEEecccccc-cHHHHHHHHHHhcccCC-CCccceeeeeEeC-Ce
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD------QKTVAVKKLSQATGQ-CDREFAAEMETLDMVKH-QNLVQLLGYCSVG-EE 731 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~------~~~valK~~~~~~~~-~~~~~~~E~~~l~~l~~-~~i~~~~~~~~~~-~~ 731 (885)
.+|+++++||+|+||.||+|++.. ++.||+|.+...... ..+.+.+|++++.++.| |||+++++++..+ +.
T Consensus 64 ~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~ 143 (353)
T 4ase_A 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 143 (353)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSC
T ss_pred HHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCE
Confidence 469999999999999999998643 457999999765432 34678999999999976 8999999998654 56
Q ss_pred eEEEEecccCCCHHHHHhhc---------------CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC
Q 047790 732 KLLVYEYMVNGSLDDWLRNR---------------AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND 796 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~---------------~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~ 796 (885)
.++|||||++|+|.++++.. ...+++..+..++.|++.|++||| +++|+||||||+||++++
T Consensus 144 ~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK~~NILl~~ 220 (353)
T 4ase_A 144 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSE 220 (353)
T ss_dssp CEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECG
T ss_pred EEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCccCccceeeCC
Confidence 89999999999999999752 234789999999999999999999 899999999999999999
Q ss_pred CCcEEEeeccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 797 YFEAKVSDFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 797 ~~~vkl~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
++.+||+|||+|+.+...... ......+|+.|||||++.+..|+.++|||||||++|||+| |+.||.+.
T Consensus 221 ~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~ 291 (353)
T 4ase_A 221 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 291 (353)
T ss_dssp GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred CCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence 999999999999876543322 2334568999999999999999999999999999999998 99999754
No 50
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.5e-38 Score=345.57 Aligned_cols=202 Identities=23% Similarity=0.320 Sum_probs=172.8
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEe------C
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSV------G 729 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~------~ 729 (885)
+..+|++.++||+|+||.||+|++. +|+.||+|++++... ...+++.+|+++++.++||||+++++++.. .
T Consensus 52 i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 131 (398)
T 4b99_A 52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF 131 (398)
T ss_dssp CCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred CCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence 3457999999999999999999875 599999999975432 234578899999999999999999998754 3
Q ss_pred CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcc
Q 047790 730 EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLAR 809 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~ 809 (885)
+..|+||||++ |+|.+++... +.+++..++.++.|++.|++||| ++||+||||||+||+++.++.+|++|||+|+
T Consensus 132 ~~~~ivmE~~~-g~L~~~i~~~-~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~ 206 (398)
T 4b99_A 132 KSVYVVLDLME-SDLHQIIHSS-QPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMAR 206 (398)
T ss_dssp CCEEEEEECCS-EEHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred CEEEEEEeCCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceee
Confidence 57899999995 6899999754 45999999999999999999999 9999999999999999999999999999998
Q ss_pred cccCCC---CCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 810 LISDCE---SHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 810 ~~~~~~---~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.+.... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||.+.
T Consensus 207 ~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~ 266 (398)
T 4b99_A 207 GLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK 266 (398)
T ss_dssp CC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS
T ss_pred ecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC
Confidence 764321 2233456899999999998875 5699999999999999999999999754
No 51
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2e-37 Score=355.42 Aligned_cols=200 Identities=21% Similarity=0.290 Sum_probs=174.0
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHH---HHHHhcccCCCCccceeeeeEeCCe
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAA---EMETLDMVKHQNLVQLLGYCSVGEE 731 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~---E~~~l~~l~~~~i~~~~~~~~~~~~ 731 (885)
...+|++.++||+|+||.||+|++. +|+.||+|++.+.. ........+ ++++++.++||||++++++|.+++.
T Consensus 187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ 266 (689)
T 3v5w_A 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK 266 (689)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence 4567999999999999999999876 48999999997542 122333334 4566777889999999999999999
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
.|+||||++||+|.+++...+ .+++..++.++.||+.|++||| ++||+||||||+||+++.+|++||+|||+|+.+
T Consensus 267 lylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeec
Confidence 999999999999999998654 4999999999999999999999 999999999999999999999999999999877
Q ss_pred cCCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.... ....+||+.|+|||++.+ ..|+.++|+||+||++|||++|+.||...
T Consensus 343 ~~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~ 394 (689)
T 3v5w_A 343 SKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 394 (689)
T ss_dssp SSCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGG
T ss_pred CCCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 5432 344689999999999964 67999999999999999999999999653
No 52
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.3e-36 Score=339.94 Aligned_cols=351 Identities=18% Similarity=0.181 Sum_probs=200.3
Q ss_pred CCCCCCCCCCCcc-cCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccC
Q 047790 43 VLSGWNKTTRHCH-WFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGE 121 (885)
Q Consensus 43 ~~~~w~~~~~~c~-w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 121 (885)
.+++|..+.+||. |.+..|....+ .+............-..++++++|++++|.++...+..+..+++|++|+|++
T Consensus 2 ~~~~~~~~~~C~~~~~~~~c~~~~~---~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~ 78 (390)
T 3o6n_A 2 NVKPRQPEYKCIDSNLQYDCVFYDV---HIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLND 78 (390)
T ss_dssp -----CCEECBCC------EEEESC---EECSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTT
T ss_pred CcCCCCCccceehhhhhhccceeee---eeecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECCC
Confidence 3678988888875 55555532211 1122221111222223456777777777776544444466677777777777
Q ss_pred CcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCC
Q 047790 122 NQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLP 201 (885)
Q Consensus 122 n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 201 (885)
|++++..|..|+.+++|++|+|++|.+++..|..|+.+++|++|+|++|+++...+..|.++++|++|++++|+++ .++
T Consensus 79 n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~-~~~ 157 (390)
T 3o6n_A 79 LQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLE-RIE 157 (390)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-BCC
T ss_pred CcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccC-ccC
Confidence 7776555556666777777777777766666666666666666666666666443344566666666666666665 444
Q ss_pred cccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCccccccccc
Q 047790 202 VSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRE 281 (885)
Q Consensus 202 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~ 281 (885)
...+..+++|++|++++|++++. .+..+++|+.|++++|.+++.
T Consensus 158 ~~~~~~l~~L~~L~l~~n~l~~~--------------------------------~~~~l~~L~~L~l~~n~l~~~---- 201 (390)
T 3o6n_A 158 DDTFQATTSLQNLQLSSNRLTHV--------------------------------DLSLIPSLFHANVSYNLLSTL---- 201 (390)
T ss_dssp TTTTSSCTTCCEEECCSSCCSBC--------------------------------CGGGCTTCSEEECCSSCCSEE----
T ss_pred hhhccCCCCCCEEECCCCcCCcc--------------------------------ccccccccceeeccccccccc----
Confidence 44456666666666666655421 012234455555555555421
Q ss_pred ccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCccccCccccce
Q 047790 282 LCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLME 361 (885)
Q Consensus 282 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 361 (885)
....+|++|++++|.++..+... .+ .|+.|++++|+++
T Consensus 202 -~~~~~L~~L~l~~n~l~~~~~~~---~~-----------------------~L~~L~l~~n~l~--------------- 239 (390)
T 3o6n_A 202 -AIPIAVEELDASHNSINVVRGPV---NV-----------------------ELTILKLQHNNLT--------------- 239 (390)
T ss_dssp -ECCSSCSEEECCSSCCCEEECCC---CS-----------------------SCCEEECCSSCCC---------------
T ss_pred -CCCCcceEEECCCCeeeeccccc---cc-----------------------cccEEECCCCCCc---------------
Confidence 11223344444444333221110 11 2333333333333
Q ss_pred eecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCccc
Q 047790 362 FNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNL 441 (885)
Q Consensus 362 L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 441 (885)
+. ..+..+++|++|+|++|++++..|..|..+++|+.|+|++|++++ +|..+..+++|++|++++|++
T Consensus 240 ---------~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l 307 (390)
T 3o6n_A 240 ---------DT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHL 307 (390)
T ss_dssp ---------CC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCC
T ss_pred ---------cc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcc
Confidence 21 235566677777777777777777777777777777777777775 455666777788888877777
Q ss_pred CcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeecccccee
Q 047790 442 NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTG 507 (885)
Q Consensus 442 ~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 507 (885)
+ .+|..+..+++|+.|++++|++++. | +..+++|+.|++++|++++
T Consensus 308 ~-----------------~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 308 L-----------------HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp C-----------------CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred e-----------------ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccc
Confidence 5 5566677777888888888887743 3 5566777777777777764
No 53
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.7e-37 Score=337.64 Aligned_cols=197 Identities=24% Similarity=0.342 Sum_probs=169.7
Q ss_pred eEEeecceecccCCceEEEEEeC----CCCeEEEEEecccccccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP----DQKTVAVKKLSQATGQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~----~~~~valK~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv 735 (885)
.+|++.++||+|+||.||+|+++ .++.||+|++.... ...++.+|+++++.+ .||||+++++++.++++.|+|
T Consensus 21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lv 98 (361)
T 4f9c_A 21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIA 98 (361)
T ss_dssp GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEE
T ss_pred CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEE
Confidence 46999999999999999999753 46789999986543 356788999999988 599999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCC-CcEEEeeccCcccccCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY-FEAKVSDFGLARLISDC 814 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~-~~vkl~Dfg~a~~~~~~ 814 (885)
|||++|++|.+++. .+++..++.++.|++.|++||| ++||+||||||+||+++.+ +.+||+|||+|+...+.
T Consensus 99 mE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~ 171 (361)
T 4f9c_A 99 MPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDT 171 (361)
T ss_dssp EECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTC
T ss_pred EeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCc
Confidence 99999999999984 3899999999999999999999 9999999999999999866 79999999999765432
Q ss_pred CC---------------------------CcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 815 ES---------------------------HVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 815 ~~---------------------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
.. .......||+.|+|||++.+. .++.++||||+||++|||++|+.||.+..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~ 251 (361)
T 4f9c_A 172 KIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251 (361)
T ss_dssp SCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCC
Confidence 11 112234699999999998876 58999999999999999999999996543
No 54
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=349.01 Aligned_cols=319 Identities=18% Similarity=0.225 Sum_probs=214.6
Q ss_pred CEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCC
Q 047790 91 RILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGN 170 (885)
Q Consensus 91 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 170 (885)
+.++.+++.++ .+|..+. +++++|+|++|++++..|..|..+++|++|+|++|.+++..|..|+++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 45777777775 4555443 46777777777777666677777777777777777777666777777777777777777
Q ss_pred cCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceeccccccccccc
Q 047790 171 GLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLF 250 (885)
Q Consensus 171 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~ 250 (885)
++++..+..|.++++|++|+|++|+++ .++...|..+++|++|++++|++++..|.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~----------------------- 146 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIV-ILLDYMFQDLYNLKSLEVGDNDLVYISHR----------------------- 146 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCC-EECTTTTTTCTTCCEEEECCTTCCEECTT-----------------------
T ss_pred cCCccCcccccCCCCCCEEECCCCccc-cCChhHccccccCCEEECCCCccceeChh-----------------------
Confidence 777555556677777777777777776 34334466777777777777766543333
Q ss_pred ccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCccc
Q 047790 251 VGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYI 330 (885)
Q Consensus 251 ~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 330 (885)
.+..+++|++|++++|++++..+..+..+++|+.|+|++|.+++..+..|..+++|++|++++|...+.+|...
T Consensus 147 ------~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~ 220 (477)
T 2id5_A 147 ------AFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNC 220 (477)
T ss_dssp ------SSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTT
T ss_pred ------hccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCccc
Confidence 34455667777777777776666667777777777777777777777777777777777777776665555433
Q ss_pred CC-CCceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccc
Q 047790 331 SE-LPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQI 409 (885)
Q Consensus 331 ~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 409 (885)
.. .+|+.|++++|++++..+..+..+++|+.|++++|.+.+..+..|..+++|++|+|++|++++..|..|..+++|+.
T Consensus 221 ~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 300 (477)
T 2id5_A 221 LYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRV 300 (477)
T ss_dssp TTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCE
T ss_pred ccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCE
Confidence 32 26777777777777555455666666666666666666666666666666666666666666666666666666666
Q ss_pred eecccccccCcCCCccCCCCcccEEEcCCcccC
Q 047790 410 LKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLN 442 (885)
Q Consensus 410 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 442 (885)
|+|++|+|+++.+..|..+++|++|+|++|.+.
T Consensus 301 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 333 (477)
T 2id5_A 301 LNVSGNQLTTLEESVFHSVGNLETLILDSNPLA 333 (477)
T ss_dssp EECCSSCCSCCCGGGBSCGGGCCEEECCSSCEE
T ss_pred EECCCCcCceeCHhHcCCCcccCEEEccCCCcc
Confidence 666666666655555666666666666666654
No 55
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=5.2e-36 Score=353.49 Aligned_cols=347 Identities=17% Similarity=0.178 Sum_probs=212.7
Q ss_pred CCCCCCCCCCCCcc----cCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEE
Q 047790 42 QVLSGWNKTTRHCH----WFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKML 117 (885)
Q Consensus 42 ~~~~~w~~~~~~c~----w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 117 (885)
..+++|..+.+||. |.++.|+. + +............-..+++++.|++++|.+....+..++.+++|++|
T Consensus 7 ~~l~~~~~~~~C~~~~~~~~c~~~~~-~-----i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L 80 (597)
T 3oja_B 7 YNVKPRQPEYKCIDSNLQYDCVFYDV-H-----IDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELL 80 (597)
T ss_dssp ----CCCSEECCCCC--CCSEEECSC-E-----ECSSCCCCEESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEE
T ss_pred ccccCCCCCCcCcccCcCceeEecCc-e-----ecccccccccCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEE
Confidence 35788988888874 55554431 1 11111111111122346788888888888876666667888888888
Q ss_pred eccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccC
Q 047790 118 SVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLS 197 (885)
Q Consensus 118 ~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 197 (885)
+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+.+++|++|+|++|.|++..+..|+++++|++|+|++|.++
T Consensus 81 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~ 160 (597)
T 3oja_B 81 NLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLE 160 (597)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCC
Confidence 88888888777778888888888888888888777777888888888888888888665566788888888888888887
Q ss_pred CCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCccccc
Q 047790 198 GSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGP 277 (885)
Q Consensus 198 ~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 277 (885)
.++...+.++++|++|++++|.+++.. +..+++|+.|++++|.+++
T Consensus 161 -~~~~~~~~~l~~L~~L~L~~N~l~~~~--------------------------------~~~l~~L~~L~l~~n~l~~- 206 (597)
T 3oja_B 161 -RIEDDTFQATTSLQNLQLSSNRLTHVD--------------------------------LSLIPSLFHANVSYNLLST- 206 (597)
T ss_dssp -BCCTTTTTTCTTCCEEECTTSCCSBCC--------------------------------GGGCTTCSEEECCSSCCSE-
T ss_pred -CCChhhhhcCCcCcEEECcCCCCCCcC--------------------------------hhhhhhhhhhhcccCcccc-
Confidence 444455778888888888888776421 1234556666666666653
Q ss_pred ccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC-CceeEEeecCccccccCccccCc
Q 047790 278 IPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNS 356 (885)
Q Consensus 278 ~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l 356 (885)
+....+|+.|++++|.++..++..+ ++|+.|+|++|.+++. ..+..+ .|+.|+|++|.+++..|..|..+
T Consensus 207 ----l~~~~~L~~L~ls~n~l~~~~~~~~---~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l 277 (597)
T 3oja_B 207 ----LAIPIAVEELDASHNSINVVRGPVN---VELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKM 277 (597)
T ss_dssp ----EECCTTCSEEECCSSCCCEEECSCC---SCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTC
T ss_pred ----ccCCchhheeeccCCcccccccccC---CCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCCCCHHHhcCc
Confidence 2234456666666666665444322 4566666666665542 222222 45555555555555555555555
Q ss_pred cccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEc
Q 047790 357 ENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDL 436 (885)
Q Consensus 357 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 436 (885)
++|+.|++++|.+.+. |..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|.|++. | +..+++|+.|++
T Consensus 278 ~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l 352 (597)
T 3oja_B 278 QRLERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTL 352 (597)
T ss_dssp SSCCEEECTTSCCCEE-ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEEC
T ss_pred cCCCEEECCCCCCCCC-CcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEe
Confidence 5555555555555442 333444555555555555555 3444455555555555555555543 1 344455555555
Q ss_pred CCcccC
Q 047790 437 GSNNLN 442 (885)
Q Consensus 437 s~N~l~ 442 (885)
++|.+.
T Consensus 353 ~~N~~~ 358 (597)
T 3oja_B 353 SHNDWD 358 (597)
T ss_dssp CSSCEE
T ss_pred eCCCCC
Confidence 555543
No 56
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.2e-36 Score=352.83 Aligned_cols=201 Identities=21% Similarity=0.354 Sum_probs=181.2
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..+|++.+.||+|+||.||+|+++ +|+.||+|++........+.+.+|+++++.++||||+++++++.+++..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 357999999999999999999875 5899999999776555567789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC--CCcEEEeeccCcccccCCCC
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND--YFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~--~~~vkl~Dfg~a~~~~~~~~ 816 (885)
++||+|.+++..+...+++..+..++.|++.|++||| +++|+||||||+||+++. .+.+||+|||+|+.+....
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~- 311 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ- 311 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS-
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC-
Confidence 9999999999766667999999999999999999999 999999999999999985 4789999999998876432
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......||+.|+|||++.+..|+.++||||+||++|||++|+.||.+.
T Consensus 312 -~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~ 359 (573)
T 3uto_A 312 -SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE 359 (573)
T ss_dssp -EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred -ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 223457999999999999999999999999999999999999999753
No 57
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=4.5e-36 Score=324.12 Aligned_cols=259 Identities=27% Similarity=0.398 Sum_probs=230.8
Q ss_pred CceeEEeecCcccc--ccCccccCccccceeeccc-ccccCCCcccccccccccEEEccCCcccccCcccccccccccce
Q 047790 334 PLKVFDLQYNNFTG--VIPVSLWNSENLMEFNAAS-NLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQIL 410 (885)
Q Consensus 334 ~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 410 (885)
.++.|+|++|++++ .+|..+.++++|++|++++ |.+.+.+|..|.++++|++|+|++|++++.+|..|..+++|++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 130 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEE
Confidence 56777888888887 7788888888888888884 88888888889999999999999999998899999999999999
Q ss_pred ecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCC-CCCEEeccCccccCCCCCCc
Q 047790 411 KLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLT-NLTTLNLFGNLLTGSIPPEF 489 (885)
Q Consensus 411 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~~ 489 (885)
+|++|.+++.+|..|..+++|++|++++|+++ +.+|..+..++ +|+.|++++|++++.+|..+
T Consensus 131 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~----------------~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~ 194 (313)
T 1ogq_A 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRIS----------------GAIPDSYGSFSKLFTSMTISRNRLTGKIPPTF 194 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCE----------------EECCGGGGCCCTTCCEEECCSSEEEEECCGGG
T ss_pred eCCCCccCCcCChHHhcCCCCCeEECcCCccc----------------CcCCHHHhhhhhcCcEEECcCCeeeccCChHH
Confidence 99999999999999999999999999988874 56788898888 99999999999999999999
Q ss_pred ccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCc
Q 047790 490 GDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNL 569 (885)
Q Consensus 490 ~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l 569 (885)
..+. |+.|++++|++++.+ |..|..+++|+.|+|++|++ ++.+|. +..+
T Consensus 195 ~~l~-L~~L~Ls~N~l~~~~----------------~~~~~~l~~L~~L~L~~N~l-------------~~~~~~-~~~l 243 (313)
T 1ogq_A 195 ANLN-LAFVDLSRNMLEGDA----------------SVLFGSDKNTQKIHLAKNSL-------------AFDLGK-VGLS 243 (313)
T ss_dssp GGCC-CSEEECCSSEEEECC----------------GGGCCTTSCCSEEECCSSEE-------------CCBGGG-CCCC
T ss_pred hCCc-ccEEECcCCcccCcC----------------CHHHhcCCCCCEEECCCCce-------------eeecCc-cccc
Confidence 9887 999999999999755 77888999999999995554 444554 8889
Q ss_pred ccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCCccccccccccccCCccccccccCCccc
Q 047790 570 VQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNKDLCEKIMGSDCQ 640 (885)
Q Consensus 570 ~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~~~~~~c~ 640 (885)
++|++|+|++|++++.+|..+..+++|++|++++|+++|.+|....+++++.+++.+||++||.|++ .|.
T Consensus 244 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~-~C~ 313 (313)
T 1ogq_A 244 KNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP-ACT 313 (313)
T ss_dssp TTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS-CCC
T ss_pred CCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCC-CCC
Confidence 9999999999999999999999999999999999999999999988999999999999999999887 473
No 58
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.6e-35 Score=329.26 Aligned_cols=326 Identities=20% Similarity=0.217 Sum_probs=159.8
Q ss_pred CCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC-CceeEEe
Q 047790 262 SMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDL 340 (885)
Q Consensus 262 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L 340 (885)
+++++|++++|.++...+..+..+++|++|+|++|.+++.++..|..+++|++|++++|++++..|..+..+ .|++|++
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 445555555555543333334445555555555555554444455555555555555555554444444444 3555555
Q ss_pred ecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCc
Q 047790 341 QYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGI 420 (885)
Q Consensus 341 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 420 (885)
++|+++...+..|..+++|++|++++|.+.+..+..|..+++|++|++++|++++. .+..+++|+.|++++|.+++.
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~ 201 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL 201 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEE
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccccc
Confidence 55555544333344555555555555555544444455555555555555555432 133344555555555554432
Q ss_pred CCCccCCCCcccEEEcCCcccCccee-----EEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCccccccc
Q 047790 421 IPMEFGDCISLNTLDLGSNNLNGCVV-----VVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKV 495 (885)
Q Consensus 421 ~p~~~~~l~~L~~L~Ls~N~l~~~~~-----~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 495 (885)
...++|++|++++|.++.... ++.|++++|.+++ +..+..+++|+.|++++|.+++..|..|..+++|
T Consensus 202 -----~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~--~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 274 (390)
T 3o6n_A 202 -----AIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRL 274 (390)
T ss_dssp -----ECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSC
T ss_pred -----CCCCcceEEECCCCeeeeccccccccccEEECCCCCCcc--cHHHcCCCCccEEECCCCcCCCcChhHccccccC
Confidence 112345555555555432110 0111111122222 1345555666666666666665555556666666
Q ss_pred ceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCccccccc
Q 047790 496 QGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYL 575 (885)
Q Consensus 496 ~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L 575 (885)
+.|++++|++++ +|..+..+++|+.|+|++|+++ .+|..++.+++|++|
T Consensus 275 ~~L~L~~n~l~~-----------------~~~~~~~l~~L~~L~L~~n~l~--------------~~~~~~~~l~~L~~L 323 (390)
T 3o6n_A 275 ERLYISNNRLVA-----------------LNLYGQPIPTLKVLDLSHNHLL--------------HVERNQPQFDRLENL 323 (390)
T ss_dssp CEEECCSSCCCE-----------------EECSSSCCTTCCEEECCSSCCC--------------CCGGGHHHHTTCSEE
T ss_pred CEEECCCCcCcc-----------------cCcccCCCCCCCEEECCCCcce--------------ecCccccccCcCCEE
Confidence 666666666552 1333445556666666644443 345555556666666
Q ss_pred ccccccCCCCCCccccCccccceeecccCcCCCCCCCCccccccccccccCCccccc
Q 047790 576 DFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNKDLCE 632 (885)
Q Consensus 576 ~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~ 632 (885)
+|++|++++ +| +..+++|++|++++|++.+.. ....+..+....+.+++..|+
T Consensus 324 ~L~~N~i~~-~~--~~~~~~L~~L~l~~N~~~~~~-~~~~~~~~~~~~~~~~~~~c~ 376 (390)
T 3o6n_A 324 YLDHNSIVT-LK--LSTHHTLKNLTLSHNDWDCNS-LRALFRNVARPAVDDADQHCK 376 (390)
T ss_dssp ECCSSCCCC-CC--CCTTCCCSEEECCSSCEEHHH-HHHHTTTCCTTTBCCCCSCCC
T ss_pred ECCCCccce-eC--chhhccCCEEEcCCCCccchh-HHHHHHHHHhhcccccCceec
Confidence 666666652 33 445556666666666655432 112333444444555555553
No 59
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=4.6e-35 Score=345.41 Aligned_cols=332 Identities=18% Similarity=0.194 Sum_probs=216.0
Q ss_pred CCcccceecccccccccccccccCcc-ccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccC
Q 047790 232 LKKLSDLYLGIGPYQLSLFVGRITPE-IGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCT 310 (885)
Q Consensus 232 l~~L~~L~l~~n~~~~~~~~~~~~~~-l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 310 (885)
+++++.++++.+. .+.+|+. +..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++.++..|+.++
T Consensus 50 l~~l~~l~l~~~~------l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 123 (597)
T 3oja_B 50 LNNQKIVTFKNST------MRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVP 123 (597)
T ss_dssp GCCCSEEEESSCE------ESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred CCCceEEEeeCCC------CCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCC
Confidence 3455555554332 2334443 45566666666666666655555666666666666666666666666666666
Q ss_pred CcceeeccccccCCCCCcccCCC-CceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEcc
Q 047790 311 NLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLS 389 (885)
Q Consensus 311 ~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls 389 (885)
+|++|+|++|.+++..+..+..+ .|++|+|++|.+++..|..|..+++|+.|++++|.+.+.. +..+++|+.|+++
T Consensus 124 ~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~ 200 (597)
T 3oja_B 124 LLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVS 200 (597)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECC
T ss_pred CCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcc
Confidence 66666666666665555544444 4666666666666666666666666666666666665442 3444556666666
Q ss_pred CCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCC
Q 047790 390 SNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLT 469 (885)
Q Consensus 390 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~ 469 (885)
+|.+++. ...++|+.|++++|.++...+.. .++|+.|+|++|.++ + +..+..++
T Consensus 201 ~n~l~~l-----~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~----------------~--~~~l~~l~ 254 (597)
T 3oja_B 201 YNLLSTL-----AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLT----------------D--TAWLLNYP 254 (597)
T ss_dssp SSCCSEE-----ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCC----------------C--CGGGGGCT
T ss_pred cCccccc-----cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCC----------------C--ChhhccCC
Confidence 6655432 22345666666666665432222 145566666665553 3 36678888
Q ss_pred CCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCce
Q 047790 470 NLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIV 549 (885)
Q Consensus 470 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 549 (885)
+|+.|+|++|.+++..|..|..+++|+.|+|++|++++ +|..+..+++|+.|+|++|+++
T Consensus 255 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-----------------l~~~~~~l~~L~~L~Ls~N~l~--- 314 (597)
T 3oja_B 255 GLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-----------------LNLYGQPIPTLKVLDLSHNHLL--- 314 (597)
T ss_dssp TCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-----------------EECSSSCCTTCCEEECCSSCCC---
T ss_pred CCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-----------------CCcccccCCCCcEEECCCCCCC---
Confidence 88888888888888888888888888888888888874 2455667888888888866665
Q ss_pred eeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCCccccccccccccCCcc
Q 047790 550 GLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNKD 629 (885)
Q Consensus 550 ~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~ 629 (885)
.+|..++.+++|++|+|++|++++ +| +..+++|++|++++|++.+..+ ...+..+....+.+++.
T Consensus 315 -----------~i~~~~~~l~~L~~L~L~~N~l~~-~~--~~~~~~L~~L~l~~N~~~~~~~-~~~~~~~~~~~~~~~~~ 379 (597)
T 3oja_B 315 -----------HVERNQPQFDRLENLYLDHNSIVT-LK--LSTHHTLKNLTLSHNDWDCNSL-RALFRNVARPAVDDADQ 379 (597)
T ss_dssp -----------CCGGGHHHHTTCSEEECCSSCCCC-CC--CCTTCCCSEEECCSSCEEHHHH-HHHTTTCCTTTBCCCCC
T ss_pred -----------ccCcccccCCCCCEEECCCCCCCC-cC--hhhcCCCCEEEeeCCCCCChhH-HHHHHHHhhhccccccc
Confidence 577788888889999999998874 44 5677888889999998887532 23445566666778888
Q ss_pred cccc
Q 047790 630 LCEK 633 (885)
Q Consensus 630 ~c~~ 633 (885)
.|+.
T Consensus 380 ~C~~ 383 (597)
T 3oja_B 380 HCKI 383 (597)
T ss_dssp CCCT
T ss_pred cCCc
Confidence 8864
No 60
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=3e-34 Score=307.75 Aligned_cols=200 Identities=26% Similarity=0.365 Sum_probs=180.3
Q ss_pred eeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..+|++.++||+|+||.||+|.+ .+++.||+|++........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 35699999999999999999986 45889999999766656677899999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+++++|.+++... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+........ .
T Consensus 99 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 172 (297)
T 3fxz_A 99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K 172 (297)
T ss_dssp CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-C
T ss_pred CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-c
Confidence 9999999999864 4899999999999999999999 89999999999999999999999999999987654322 2
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....+|+.|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 219 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE 219 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 34457999999999999999999999999999999999999999653
No 61
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.3e-34 Score=307.02 Aligned_cols=206 Identities=25% Similarity=0.416 Sum_probs=175.6
Q ss_pred ceeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc---ccHHHHHHHHHHhcccCCCCccceeeeeEeCCe
Q 047790 656 SVLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG---QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEE 731 (885)
Q Consensus 656 ~~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 731 (885)
+..+..+|++.+.||+|+||.||+|++. +++.||+|++..... ...+++.+|++++++++||||+++++++..++.
T Consensus 6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~ 85 (294)
T 4eqm_A 6 GKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDC 85 (294)
T ss_dssp SSCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSE
T ss_pred hhHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCe
Confidence 3455678999999999999999999865 588999999864332 224578899999999999999999999999999
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
.++||||+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+...
T Consensus 86 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 161 (294)
T 4eqm_A 86 YYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL 161 (294)
T ss_dssp EEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC
T ss_pred EEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccc
Confidence 999999999999999998654 4899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
............+|+.|+|||++.+..++.++||||+|+++|+|++|+.||...
T Consensus 162 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~ 215 (294)
T 4eqm_A 162 SETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGE 215 (294)
T ss_dssp -------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred ccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 543333344456899999999999999999999999999999999999999754
No 62
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.2e-34 Score=314.92 Aligned_cols=267 Identities=19% Similarity=0.317 Sum_probs=182.9
Q ss_pred CCCHHHHHHHHHHHHhCC-CC-CCCCCC----CCCCCCcccCCccccC----------CcEEEEEEeccccccccccccc
Q 047790 22 DEPKQERRSLVHFKNSLQ-NP-QVLSGW----NKTTRHCHWFGVKCRH----------SRVVSLVIQTQSLKGPVSPFLF 85 (885)
Q Consensus 22 ~~~~~~~~aLl~~k~~~~-~~-~~~~~w----~~~~~~c~w~gv~c~~----------~~v~~l~l~~~~l~g~~~~~l~ 85 (885)
.+..+|++||++||+++. ++ .++.+| ....++|.|.|+.|+. .+|+.|++++++++ .+|+.++
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~ 101 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAF 101 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGG
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhh
Confidence 456789999999999884 43 467889 4577899999999953 36777777777766 6666666
Q ss_pred CCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccC-------
Q 047790 86 NLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGD------- 158 (885)
Q Consensus 86 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~------- 158 (885)
.+++|++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..|+.+++|++|+|++|++.+.+|..++.
T Consensus 102 ~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~ 179 (328)
T 4fcg_A 102 RLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEH 179 (328)
T ss_dssp GGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCE
T ss_pred hCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhh
Confidence 6777777777777766 66666777777777777777776 56666777777777777776666666665543
Q ss_pred --CccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCccc
Q 047790 159 --IKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLS 236 (885)
Q Consensus 159 --l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 236 (885)
+++|++|+|++|+++ .+|..++++++|++|+|++|+++ .+|.. +..+++|++|++++|++.+.+
T Consensus 180 ~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~-l~~l~~L~~L~Ls~n~~~~~~----------- 245 (328)
T 4fcg_A 180 QGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPA-IHHLPKLEELDLRGCTALRNY----------- 245 (328)
T ss_dssp EESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGG-GGGCTTCCEEECTTCTTCCBC-----------
T ss_pred ccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchh-hccCCCCCEEECcCCcchhhh-----------
Confidence 556666666666665 55555556666666666666665 34443 555556666666665555444
Q ss_pred ceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceee
Q 047790 237 DLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELV 316 (885)
Q Consensus 237 ~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 316 (885)
|..++.+++|++|++++|++.+.+|..+..+++|++|+|++|.+.+.+|+.+..+++|+.++
T Consensus 246 ------------------p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~ 307 (328)
T 4fcg_A 246 ------------------PPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIIL 307 (328)
T ss_dssp ------------------CCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEE
T ss_pred ------------------HHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEe
Confidence 44555566677777777777777777777777777777777777777777777777777777
Q ss_pred ccccccC
Q 047790 317 LVNNRIS 323 (885)
Q Consensus 317 Ls~N~l~ 323 (885)
+..|.+.
T Consensus 308 l~~~~~~ 314 (328)
T 4fcg_A 308 VPPHLQA 314 (328)
T ss_dssp CCGGGSC
T ss_pred CCHHHHH
Confidence 7766554
No 63
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=5.7e-34 Score=310.10 Aligned_cols=201 Identities=19% Similarity=0.217 Sum_probs=178.3
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
..+|++.+.||+|+||.||+|+.. +++.||+|++.+.. .....++.+|+++++.++||||+++++++...+..|+|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 457999999999999999999876 58999999997642 23456788999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||++||+|.+++.... .+++..++.++.|++.|++||| ++||+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 99999999999998543 4899999999999999999999 8999999999999999999999999999997643322
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.......||+.|+|||++.+..++.++|+||+||++|||++|+.||...
T Consensus 160 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 208 (337)
T 1o6l_A 160 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208 (337)
T ss_dssp -CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred -CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCC
Confidence 2234457899999999999999999999999999999999999999653
No 64
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.2e-33 Score=305.44 Aligned_cols=205 Identities=24% Similarity=0.426 Sum_probs=181.1
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
...+|++.++||+|+||.||+|.+. +++.||+|++........+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 8 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 87 (310)
T 3s95_A 8 RPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE 87 (310)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence 3467999999999999999999875 588999999876555556789999999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+..+......
T Consensus 88 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (310)
T 3s95_A 88 YIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164 (310)
T ss_dssp CCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC-----
T ss_pred ecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceeccccccc
Confidence 99999999999876677999999999999999999999 899999999999999999999999999999876432211
Q ss_pred -------------cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 818 -------------VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 818 -------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
......+|+.|+|||++.+..++.++||||+|+++|||++|..||....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~ 226 (310)
T 3s95_A 165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYL 226 (310)
T ss_dssp ---------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTS
T ss_pred ccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchh
Confidence 1114568999999999999999999999999999999999999987543
No 65
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.7e-34 Score=314.73 Aligned_cols=205 Identities=24% Similarity=0.287 Sum_probs=173.6
Q ss_pred ceeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhccc-CCCCccceeeeeEeCC
Q 047790 656 SVLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGE 730 (885)
Q Consensus 656 ~~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~ 730 (885)
..+.+.+|++.++||+|+||.||+|++. +++.||+|++.+.. ......+.+|.++++.+ +||||+++++++.+.+
T Consensus 18 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~ 97 (353)
T 3txo_A 18 NRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD 97 (353)
T ss_dssp -----CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred CCCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC
Confidence 3456778999999999999999999875 48899999997542 23456688899999988 6999999999999999
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
..|+||||++||+|.+++.... .+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||+|+.
T Consensus 98 ~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 98 RLFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceee
Confidence 9999999999999999998654 4999999999999999999999 89999999999999999999999999999976
Q ss_pred ccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 811 ISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 811 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.... ........||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 174 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~ 227 (353)
T 3txo_A 174 GICN-GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE 227 (353)
T ss_dssp SCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccC-CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC
Confidence 4332 22334567999999999999999999999999999999999999999754
No 66
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.4e-34 Score=311.12 Aligned_cols=201 Identities=22% Similarity=0.354 Sum_probs=169.2
Q ss_pred eeEEeecceecccCCceEEEEEe-CCCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
..+|++.++||+|+||.||+|++ .+++.||+|++..... ....++.+|++++++++||||+++++++...+..++|||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 88 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE 88 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence 35699999999999999999986 4689999999876442 234578899999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||++++++.+||+|||.+.........
T Consensus 89 ~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 164 (347)
T 3zgw_A 89 YCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDY 164 (347)
T ss_dssp CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC-------
T ss_pred CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCc
Confidence 999999999997654 4999999999999999999999 899999999999999999999999999998876543333
Q ss_pred cccCCCCCCccCCcccccCCCC-CCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
......+|+.|+|||++.+..+ +.++||||+||++|+|++|+.||..
T Consensus 165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~ 212 (347)
T 3zgw_A 165 HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD 212 (347)
T ss_dssp -------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 3445678999999999998876 8999999999999999999999965
No 67
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=9.5e-35 Score=326.27 Aligned_cols=203 Identities=24% Similarity=0.237 Sum_probs=179.5
Q ss_pred eeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
..+|++.++||+|+||.||+|+..+ ++.||+|++.+.. ......+.+|+.+++.++||||+++++++.+++..|+|
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV 152 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLV 152 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEE
Confidence 4579999999999999999998765 7889999987532 12233488999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+++|+|.+++......+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||+|+......
T Consensus 153 ~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~ 229 (437)
T 4aw2_A 153 MDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 229 (437)
T ss_dssp ECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred EecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCC
Confidence 9999999999999875667999999999999999999999 8999999999999999999999999999998765544
Q ss_pred CCcccCCCCCCccCCccccc-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQ-----AGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
........||+.|+|||++. ...++.++||||+||++|||++|+.||...
T Consensus 230 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~ 284 (437)
T 4aw2_A 230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 284 (437)
T ss_dssp CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC
Confidence 44444567999999999987 567899999999999999999999999754
No 68
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.3e-33 Score=308.41 Aligned_cols=305 Identities=24% Similarity=0.347 Sum_probs=185.4
Q ss_pred ccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCc
Q 047790 84 LFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLK 163 (885)
Q Consensus 84 l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 163 (885)
+..+++|++|++++|.+.. ++ .+..+++|++|++++|++++. |. +..+++|++|++++|.+++ + +.+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-I-SALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCS
T ss_pred chhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-c-hHHcCCCcCC
Confidence 4567788888888888754 33 477788888888888888743 33 7778888888888888774 3 3577788888
Q ss_pred eEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccc
Q 047790 164 SLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIG 243 (885)
Q Consensus 164 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n 243 (885)
+|++++|++++. +. +..+++|++|++++|.....++. +..+++|++|++++|.+++..+
T Consensus 114 ~L~l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~~--~~~l~~L~~L~l~~~~~~~~~~----------------- 172 (347)
T 4fmz_A 114 ELYLNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLSP--LSNMTGLNYLTVTESKVKDVTP----------------- 172 (347)
T ss_dssp EEECTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCGG--GTTCTTCCEEECCSSCCCCCGG-----------------
T ss_pred EEECcCCcccCc-hh-hccCCceeEEECCCCCCcccccc--hhhCCCCcEEEecCCCcCCchh-----------------
Confidence 888888887743 33 77778888888888855534443 6777777777777777653221
Q ss_pred cccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccC
Q 047790 244 PYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRIS 323 (885)
Q Consensus 244 ~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 323 (885)
+..+++|++|++++|++++..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|+++
T Consensus 173 --------------~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~ 234 (347)
T 4fmz_A 173 --------------IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKIT 234 (347)
T ss_dssp --------------GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC
T ss_pred --------------hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccC
Confidence 3344556666666666654332 5556666666666666665544 555666666666666665
Q ss_pred CCCCcccCCC-CceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCccccc
Q 047790 324 GSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIG 402 (885)
Q Consensus 324 ~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 402 (885)
+..+ +..+ .|++|++++|++++. ..+..+++|++|++++|.+.+. ..+..+++|++|++++|++++..|..+.
T Consensus 235 ~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 308 (347)
T 4fmz_A 235 DLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIG 308 (347)
T ss_dssp CCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHH
T ss_pred CCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhh
Confidence 4332 2222 455555555555442 2344455555555555555443 2345555555555555555555555555
Q ss_pred ccccccceecccccccCcCCCccCCCCcccEEEcCCccc
Q 047790 403 NLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNL 441 (885)
Q Consensus 403 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 441 (885)
.+++|+.|++++|++++..| +..+++|++|++++|.|
T Consensus 309 ~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 309 GLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVI 345 (347)
T ss_dssp TCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC--
T ss_pred ccccCCEEEccCCccccccC--hhhhhccceeehhhhcc
Confidence 55555555555555554443 45555555555555554
No 69
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=7.2e-34 Score=308.49 Aligned_cols=202 Identities=22% Similarity=0.335 Sum_probs=178.7
Q ss_pred eeeeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
..+++|++.+.||+|+||.||+|++ .+++.||+|++.... ....+++.+|+++++.++||||+++++++...+..|+
T Consensus 12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 91 (328)
T 3fe3_A 12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL 91 (328)
T ss_dssp CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence 3456799999999999999999987 568999999997543 2334678899999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+......
T Consensus 92 v~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 167 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 167 (328)
T ss_dssp EECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS
T ss_pred EEECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCC
Confidence 999999999999997654 4899999999999999999999 899999999999999999999999999999876542
Q ss_pred CCCcccCCCCCCccCCcccccCCCCC-CcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRAN-ERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
. ......+|+.|+|||++.+..+. .++||||+||++|+|++|+.||.+.
T Consensus 168 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 217 (328)
T 3fe3_A 168 G--KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 217 (328)
T ss_dssp C--GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred C--ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCC
Confidence 2 23445799999999999988875 7899999999999999999999753
No 70
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=9.3e-34 Score=313.99 Aligned_cols=203 Identities=19% Similarity=0.252 Sum_probs=177.5
Q ss_pred eeeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccc---cHHHHHHHHHHhccc-CCCCccceeeeeEeCCee
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQ---CDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~---~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~ 732 (885)
+...+|++.++||+|+||.||+|+.++ ++.||+|++++.... ....+.+|..+++++ +||||+++++++.+++..
T Consensus 49 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 128 (396)
T 4dc2_A 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL 128 (396)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEE
Confidence 345679999999999999999998764 788999999765322 234578899999887 799999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
|+||||++||+|..++.... .+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||+++...
T Consensus 129 ~lV~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 129 FFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 99999999999999998654 4999999999999999999999 8999999999999999999999999999997633
Q ss_pred CCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 813 DCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 813 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.. ........||+.|+|||++.+..++.++|+||+||++|||++|+.||...
T Consensus 205 ~~-~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~ 256 (396)
T 4dc2_A 205 RP-GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 256 (396)
T ss_dssp CT-TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTT
T ss_pred cC-CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccc
Confidence 22 22334567999999999999999999999999999999999999999643
No 71
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2e-34 Score=321.38 Aligned_cols=204 Identities=23% Similarity=0.199 Sum_probs=179.8
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
...+|++.++||+|+||.||+|+.. +++.||+|++.+.. ......+.+|.+++..++||+|+++++++.+++..|+
T Consensus 59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~l 138 (412)
T 2vd5_A 59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYL 138 (412)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEE
T ss_pred ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 3467999999999999999999875 58999999997532 1223457889999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||++||+|.+++...+..+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||++......
T Consensus 139 VmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~ 215 (412)
T 2vd5_A 139 VMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD 215 (412)
T ss_dssp EECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhheeccCC
Confidence 99999999999999876656999999999999999999999 899999999999999999999999999999877654
Q ss_pred CCCcccCCCCCCccCCccccc-------CCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQ-------AGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~-------~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.........||+.|+|||++. +..++.++|+||+||++|||++|+.||...
T Consensus 216 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~ 273 (412)
T 2vd5_A 216 GTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD 273 (412)
T ss_dssp SCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred CccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC
Confidence 333344567999999999987 456899999999999999999999999754
No 72
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-33 Score=303.14 Aligned_cols=198 Identities=23% Similarity=0.325 Sum_probs=177.6
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
..+|++.+.||+|+||.||+|+.. +++.||+|++.+.. ....+.+.+|+.+++.++||||+++++++.+....|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 457999999999999999999875 58999999997542 23456788999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||++|++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+.....
T Consensus 85 ~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~-- 158 (318)
T 1fot_A 85 MDYIEGGELFSLLRKS-QRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-- 158 (318)
T ss_dssp ECCCCSCBHHHHHHHT-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS--
T ss_pred EeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCC--
Confidence 9999999999999854 35899999999999999999999 99999999999999999999999999999987543
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......+|+.|+|||++.+..++.++|+||+||++|||++|+.||...
T Consensus 159 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 206 (318)
T 1fot_A 159 --VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS 206 (318)
T ss_dssp --CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred --ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC
Confidence 223457899999999999999999999999999999999999999643
No 73
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=3.8e-33 Score=306.71 Aligned_cols=308 Identities=24% Similarity=0.345 Sum_probs=203.2
Q ss_pred CccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCC
Q 047790 107 QVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQL 186 (885)
Q Consensus 107 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 186 (885)
.+..+++|++|++++|.+.. +|. +..+++|++|++++|++++. |. +..+++|++|++++|++++ +| .+.++++|
T Consensus 39 ~~~~l~~L~~L~l~~~~i~~-~~~-~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L 112 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVAS-IQG-IEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNL 112 (347)
T ss_dssp CHHHHTTCSEEECCSSCCCC-CTT-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTC
T ss_pred cchhcccccEEEEeCCcccc-chh-hhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcC
Confidence 35567788888888888873 443 77788888888888887743 33 7777888888888887774 33 57777777
Q ss_pred ccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcE
Q 047790 187 QDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKY 266 (885)
Q Consensus 187 ~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~ 266 (885)
++|++++|.++ .++. +..+++|++|++++|..... ++.+..+++|++
T Consensus 113 ~~L~l~~n~i~-~~~~--~~~l~~L~~L~l~~n~~~~~------------------------------~~~~~~l~~L~~ 159 (347)
T 4fmz_A 113 RELYLNEDNIS-DISP--LANLTKMYSLNLGANHNLSD------------------------------LSPLSNMTGLNY 159 (347)
T ss_dssp SEEECTTSCCC-CCGG--GTTCTTCCEEECTTCTTCCC------------------------------CGGGTTCTTCCE
T ss_pred CEEECcCCccc-Cchh--hccCCceeEEECCCCCCccc------------------------------ccchhhCCCCcE
Confidence 77777777776 4544 66677777777777754321 122556777888
Q ss_pred EEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccc
Q 047790 267 ISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFT 346 (885)
Q Consensus 267 L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~ 346 (885)
|++++|.+++..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|.+.+..+
T Consensus 160 L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~------------------- 216 (347)
T 4fmz_A 160 LTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP------------------- 216 (347)
T ss_dssp EECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-------------------
T ss_pred EEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch-------------------
Confidence 8888888875544 7778888888888888876655 6777777777777777764433
Q ss_pred cccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccC
Q 047790 347 GVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFG 426 (885)
Q Consensus 347 ~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 426 (885)
+..+++|++|++++|.+.+..+ +..+++|++|++++|++++. ..+..+++|+.|++++|++++. ..+.
T Consensus 217 ------~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~ 284 (347)
T 4fmz_A 217 ------VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLN 284 (347)
T ss_dssp ------GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGG
T ss_pred ------hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhc
Confidence 3334444444444444443333 55556666666666666543 3466666677777777766653 3466
Q ss_pred CCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccce
Q 047790 427 DCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLT 506 (885)
Q Consensus 427 ~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 506 (885)
.+++|++|++++|+++ +..|..+..+++|+.|++++|++++..| +..+++|+.|++++|.++
T Consensus 285 ~l~~L~~L~L~~n~l~----------------~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 285 NLSQLNSLFLNNNQLG----------------NEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp GCTTCSEEECCSSCCC----------------GGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CCCCCCEEECcCCcCC----------------CcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 6677777777766653 3445666677777777777777775444 666777777777777664
No 74
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.4e-33 Score=307.74 Aligned_cols=202 Identities=24% Similarity=0.347 Sum_probs=177.6
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~ 733 (885)
...+|++.++||+|+||.||+|++. +++.||+|++++.. .........|.++++.+ +||||+++++++.+.+..|
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 4567999999999999999999876 48889999997642 23456788899999877 8999999999999999999
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||++||+|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||+++....
T Consensus 95 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENML 170 (345)
T ss_dssp EEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence 9999999999999998643 4899999999999999999999 89999999999999999999999999999976433
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
. ........||+.|+|||++.+..++.++|+||+||++|||++|+.||...
T Consensus 171 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 221 (345)
T 1xjd_A 171 G-DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 221 (345)
T ss_dssp T-TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred C-CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCC
Confidence 2 22234567999999999999999999999999999999999999999753
No 75
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.8e-34 Score=321.55 Aligned_cols=202 Identities=22% Similarity=0.229 Sum_probs=178.0
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
...+|++.++||+|+||.||+|++.. ++.||+|++.+.. ......+.+|+++++.++||||+++++++.+++..|+
T Consensus 67 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 146 (410)
T 3v8s_A 67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM 146 (410)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence 34679999999999999999998764 8889999987532 2233568899999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||++||+|.+++... .+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||.|+.+...
T Consensus 147 V~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~ 221 (410)
T 3v8s_A 147 VMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE 221 (410)
T ss_dssp EECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeEeeccC
Confidence 99999999999999753 4899999999999999999999 899999999999999999999999999999877654
Q ss_pred CCCcccCCCCCCccCCcccccCCC----CCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGR----ANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.........||+.|+|||++.+.. ++.++||||+||++|||++|+.||...
T Consensus 222 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~ 276 (410)
T 3v8s_A 222 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 276 (410)
T ss_dssp SEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred CcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCC
Confidence 333344668999999999998765 789999999999999999999999753
No 76
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.3e-33 Score=304.82 Aligned_cols=209 Identities=24% Similarity=0.302 Sum_probs=179.5
Q ss_pred eceeeeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccc--cHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 655 GSVLVIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQ--CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 655 g~~~~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
....+..+|++.++||+|+||.||+|++.+++.||+|++...... ....+.+|++++++++||||+++++++.+++..
T Consensus 15 ~~q~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 94 (311)
T 3niz_A 15 YFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL 94 (311)
T ss_dssp CEECSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCE
T ss_pred eecchHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEE
Confidence 445677899999999999999999999988999999998754322 245788999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
++||||+++ ++.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+....
T Consensus 95 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 170 (311)
T 3niz_A 95 TLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFG 170 (311)
T ss_dssp EEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred EEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence 999999975 888888876667999999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCC
Q 047790 813 DCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPEFED 868 (885)
Q Consensus 813 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~~~~ 868 (885)
... .......+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||......
T Consensus 171 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~ 226 (311)
T 3niz_A 171 IPV-RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD 226 (311)
T ss_dssp SCC-C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTT
T ss_pred CCc-ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChH
Confidence 422 22334568999999999876 56899999999999999999999999765443
No 77
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.1e-33 Score=310.07 Aligned_cols=204 Identities=22% Similarity=0.283 Sum_probs=179.4
Q ss_pred ceeeeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCe
Q 047790 656 SVLVIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEE 731 (885)
Q Consensus 656 ~~~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 731 (885)
..+...+|++.+.||+|+||.||+|++.. ++.||+|++.+.. ......+.+|+++++.++||||+++++++.+...
T Consensus 10 ~~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 89 (384)
T 4fr4_A 10 EDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEED 89 (384)
T ss_dssp CCCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred CCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 34556789999999999999999998764 8889999986532 2345678899999999999999999999999999
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
.|+||||+.||+|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+..+
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 165 (384)
T 4fr4_A 90 MFMVVDLLLGGDLRYHLQQN-VHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAML 165 (384)
T ss_dssp EEEEECCCTTEEHHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeec
Confidence 99999999999999999854 45999999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCCCcccCCCCCCccCCcccccC---CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYGQA---GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 166 ~~~--~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~ 220 (384)
T 4fr4_A 166 PRE--TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIR 220 (384)
T ss_dssp CTT--CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCC
T ss_pred cCC--CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCC
Confidence 542 23345679999999999874 45899999999999999999999999743
No 78
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.7e-33 Score=308.18 Aligned_cols=202 Identities=23% Similarity=0.261 Sum_probs=177.8
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~ 733 (885)
...+|++.++||+|+||.||+|++.. ++.||+|++.+.. ......+..|.++++.+ +||+|+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 45679999999999999999998765 7889999997642 23456788999999887 7999999999999999999
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||++||+|.+++.... .+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 98 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 9999999999999998644 4899999999999999999999 89999999999999999999999999999976432
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
. ........||+.|+|||++.+..++.++|+||+||++|||++|+.||...
T Consensus 174 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~ 224 (353)
T 2i0e_A 174 D-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 224 (353)
T ss_dssp T-TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred C-CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCC
Confidence 2 22334567999999999999999999999999999999999999999753
No 79
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.4e-33 Score=306.60 Aligned_cols=201 Identities=19% Similarity=0.249 Sum_probs=176.9
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc---cHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ---CDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~---~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~ 733 (885)
...+|++.+.||+|+||.||+|++. +++.||+|++.+.... ....+.+|.++++++ +||||+++++++.+++..|
T Consensus 7 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 86 (345)
T 3a8x_A 7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 86 (345)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEE
Confidence 3467999999999999999999876 4888999999765322 235678899999887 7999999999999999999
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||+++++|.+++.... .+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||.++....
T Consensus 87 lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~ 162 (345)
T 3a8x_A 87 FVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162 (345)
T ss_dssp EEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence 9999999999999998654 4899999999999999999999 89999999999999999999999999999976433
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.. .......+|+.|+|||++.+..++.++|+||+||++|||++|+.||..
T Consensus 163 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 212 (345)
T 3a8x_A 163 PG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212 (345)
T ss_dssp TT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CC-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence 22 223445799999999999999999999999999999999999999964
No 80
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.4e-33 Score=298.17 Aligned_cols=201 Identities=28% Similarity=0.483 Sum_probs=180.4
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..+|++.+.||+|+||.||+|.+.+++.||+|++.... ...+++.+|++++++++||||+++++++.+++..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 45799999999999999999999889999999997644 33577999999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+...........
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 164 (269)
T 4hcu_A 88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 164 (269)
T ss_dssp TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccccccccc
Confidence 999999999877677999999999999999999999 89999999999999999999999999999987654332333
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
....++..|+|||++.+..++.++||||+|+++|+|++ |+.||..
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~ 210 (269)
T 4hcu_A 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 210 (269)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCC
Confidence 44556788999999999999999999999999999999 9999864
No 81
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=6.9e-33 Score=304.36 Aligned_cols=200 Identities=26% Similarity=0.347 Sum_probs=177.5
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc------cHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ------CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~------~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
..+|++.+.||+|+||.||+|++. +++.||+|++.+.... ..+.+.+|++++++++||||+++++++.+....
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 346999999999999999999876 5889999999754321 346789999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC----cEEEeeccCc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF----EAKVSDFGLA 808 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~----~vkl~Dfg~a 808 (885)
++||||++|++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++ .+||+|||.+
T Consensus 91 ~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 9999999999999999754 45999999999999999999999 89999999999999998776 7999999999
Q ss_pred ccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 809 RLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..+.... ......||+.|+|||++.+..++.++||||+||++|+|++|..||.+.
T Consensus 167 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~ 221 (361)
T 2yab_A 167 HEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221 (361)
T ss_dssp EECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred eEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 8765422 233457999999999999999999999999999999999999999753
No 82
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.6e-33 Score=303.64 Aligned_cols=202 Identities=27% Similarity=0.345 Sum_probs=168.6
Q ss_pred eeeEEeecceecccCCceEEEEEe----CCCCeEEEEEecccc----cccHHHHHHHHHHhcccCCCCccceeeeeEeCC
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTM----PDQKTVAVKKLSQAT----GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE 730 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~----~~~~~valK~~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 730 (885)
...+|++.+.||+|+||.||+|+. .+++.||+|++.+.. ......+.+|+++++.++||||+++++++..++
T Consensus 15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 94 (327)
T 3a62_A 15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG 94 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS
T ss_pred CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC
Confidence 456799999999999999999986 468999999997643 223456788999999999999999999999999
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
..|+||||+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+..
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 95 KLYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp CEEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 9999999999999999998654 4899999999999999999999 89999999999999999999999999999876
Q ss_pred ccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 811 ISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 811 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.... ........+|+.|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 171 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 224 (327)
T 3a62_A 171 SIHD-GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE 224 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccC-CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCC
Confidence 4332 12233457899999999999999999999999999999999999999753
No 83
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=5.6e-33 Score=304.14 Aligned_cols=199 Identities=20% Similarity=0.206 Sum_probs=178.3
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
...+|++.+.||+|+||.||+|++. +++.||+|++.+.. ....+++.+|+++++.++||||+++++++.++...|+
T Consensus 39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 118 (350)
T 1rdq_E 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118 (350)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence 3467999999999999999999876 58999999986542 2345678899999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||++|++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+......
T Consensus 119 v~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~ 194 (350)
T 1rdq_E 119 VMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp EEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCC
Confidence 999999999999998654 4899999999999999999999 999999999999999999999999999999876532
Q ss_pred CCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 195 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 241 (350)
T 1rdq_E 195 ----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241 (350)
T ss_dssp ----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCC
Confidence 23457899999999999999999999999999999999999999653
No 84
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=4e-33 Score=297.88 Aligned_cols=199 Identities=25% Similarity=0.294 Sum_probs=172.5
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
.+|++.+.||+|+||.||+|++.+++.||+|++..... .....+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 46999999999999999999988899999999865432 2346788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+++ ++.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+....... ..
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 156 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV-RK 156 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc-cc
Confidence 965 999999876667999999999999999999999 8999999999999999999999999999988765322 22
Q ss_pred ccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.....+|+.|+|||++.+. .++.++||||+||++|+|++|+.||..
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 203 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPG 203 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 2344689999999998764 589999999999999999999999965
No 85
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.5e-33 Score=307.89 Aligned_cols=206 Identities=23% Similarity=0.294 Sum_probs=177.6
Q ss_pred eceeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-----cccHHHHHHHHHHhcccCCCCccceeeeeEe
Q 047790 655 GSVLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-----GQCDREFAAEMETLDMVKHQNLVQLLGYCSV 728 (885)
Q Consensus 655 g~~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-----~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~ 728 (885)
.......+|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+
T Consensus 18 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~ 97 (351)
T 3c0i_A 18 DDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS 97 (351)
T ss_dssp --CCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred CCCccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 33445567999999999999999999875 58999999986432 1245789999999999999999999999999
Q ss_pred CCeeEEEEecccCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc---EEE
Q 047790 729 GEEKLLVYEYMVNGSLDDWLRNR---AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE---AKV 802 (885)
Q Consensus 729 ~~~~~lv~e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~---vkl 802 (885)
++..|+||||+++++|.+.+..+ ...+++..+..++.|++.|++||| +.+|+||||||+||+++.++. +||
T Consensus 98 ~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl 174 (351)
T 3c0i_A 98 DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKL 174 (351)
T ss_dssp TTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEE
T ss_pred CCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEE
Confidence 99999999999999998877642 334899999999999999999999 899999999999999986554 999
Q ss_pred eeccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 803 SDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 803 ~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
+|||.+....... .......+|+.|+|||++.+..++.++||||+||++|+|++|+.||..
T Consensus 175 ~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 235 (351)
T 3c0i_A 175 GGFGVAIQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG 235 (351)
T ss_dssp CCCTTCEECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred ecCcceeEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCC
Confidence 9999998765432 223445799999999999999999999999999999999999999965
No 86
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=6.3e-33 Score=305.88 Aligned_cols=202 Identities=23% Similarity=0.276 Sum_probs=169.0
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEeccccc---ccHHHHHHHHHH-hcccCCCCccceeeeeEeCCeeE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATG---QCDREFAAEMET-LDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~---~~~~~~~~E~~~-l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
...+|++.+.||+|+||.||+|++.. ++.||+|++.+... ....++..|..+ ++.++||||+++++++.+.+..|
T Consensus 36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence 34579999999999999999998764 78899999976532 223456677777 57789999999999999999999
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||++||+|.+++.... .+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||+++....
T Consensus 116 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 9999999999999998644 4899999999999999999999 89999999999999999999999999999976433
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
. ........||+.|+|||++.+..++.++|+||+||++|||++|+.||...
T Consensus 192 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~ 242 (373)
T 2r5t_A 192 H-NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR 242 (373)
T ss_dssp C-CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred C-CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 2 22334567999999999999999999999999999999999999999653
No 87
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.7e-33 Score=295.85 Aligned_cols=201 Identities=28% Similarity=0.453 Sum_probs=180.4
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..+|++.+.||+|+||.||+|++.++..||+|++.... ....++.+|++++++++||||+++++++.++...++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 45699999999999999999999888899999997644 33577899999999999999999999999989999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+...........
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 162 (268)
T 3sxs_A 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS 162 (268)
T ss_dssp TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEEC
T ss_pred CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcc
Confidence 999999999876666999999999999999999999 89999999999999999999999999999987655433333
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
....++..|+|||++.+..++.++||||+|+++|+|++ |+.||..
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 208 (268)
T 3sxs_A 163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDL 208 (268)
T ss_dssp CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccc
Confidence 44556778999999999899999999999999999999 9999864
No 88
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=3.5e-33 Score=304.47 Aligned_cols=206 Identities=19% Similarity=0.237 Sum_probs=179.5
Q ss_pred eceeeeeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhccc-CCCCccceeeeeEeCCee
Q 047790 655 GSVLVIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 655 g~~~~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~ 732 (885)
|..++..+|++.+.||+|+||.||+|++ .+++.||+|++..... ...+.+|+++++++ +||||+++++++..++..
T Consensus 3 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 80 (330)
T 2izr_A 3 GVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYN 80 (330)
T ss_dssp -CCEETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEE
T ss_pred ceEEEcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCcc
Confidence 3445667899999999999999999986 4688999999865432 34688999999999 899999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc-----EEEeeccC
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE-----AKVSDFGL 807 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~-----vkl~Dfg~ 807 (885)
++||||+ +++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++. +||+|||.
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~ 156 (330)
T 2izr_A 81 AMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL 156 (330)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTT
T ss_pred EEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEccc
Confidence 9999999 99999999876667999999999999999999999 899999999999999998887 99999999
Q ss_pred cccccCCCCC------cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 808 ARLISDCESH------VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 808 a~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
+..+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 157 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~ 221 (330)
T 2izr_A 157 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLK 221 (330)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred ceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccc
Confidence 9876543221 1234578999999999999999999999999999999999999998653
No 89
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.2e-33 Score=302.17 Aligned_cols=201 Identities=23% Similarity=0.424 Sum_probs=176.6
Q ss_pred eeeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
.+++|++.+.||+|+||.||+|.+ .+++.||+|++.... ......+.+|+++++.++||||+++++++...+..++
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 456799999999999999999987 468899999987532 2234678999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+ +|++.+++.... .+++..+..++.|++.|++||| +.||+||||||+||++++++.+||+|||.+......
T Consensus 87 v~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp EECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred EEECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence 99999 779999887554 4899999999999999999999 899999999999999999999999999999876543
Q ss_pred CCCcccCCCCCCccCCcccccCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
. ......+++.|+|||++.+..+ +.++||||+||++|+|++|+.||....
T Consensus 162 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~ 212 (336)
T 3h4j_B 162 N--FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEF 212 (336)
T ss_dssp B--TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSS
T ss_pred c--ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCcc
Confidence 2 2334578999999999998876 789999999999999999999997643
No 90
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.6e-32 Score=299.44 Aligned_cols=126 Identities=22% Similarity=0.351 Sum_probs=63.2
Q ss_pred CCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccC
Q 047790 90 LRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSG 169 (885)
Q Consensus 90 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 169 (885)
++.++++++.++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 35 l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 35 LRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred CCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 344444444443 3333332 3455555555555544444555555555555555555544455555555555555555
Q ss_pred CcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCc
Q 047790 170 NGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLS 222 (885)
Q Consensus 170 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~ 222 (885)
|+++ .+|..+. ++|++|++++|+++ .+|...+.++++|++|++++|+++
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~l~~n~l~ 160 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPLE 160 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCC-CCCSGGGSSCSSCCEEECCSCCCB
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccC-ccCHhHhCCCccCCEEECCCCccc
Confidence 5555 3333332 45555555555554 444444555555555555555553
No 91
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.7e-33 Score=300.45 Aligned_cols=201 Identities=24% Similarity=0.307 Sum_probs=177.7
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc------ccHHHHHHHHHHhcccCCCCccceeeeeEeCCe
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG------QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEE 731 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~------~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 731 (885)
+..+|++.+.||+|+||.||+|.+. +++.||+|++..... ...+.+.+|+++++.++||||+++++++..+..
T Consensus 9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 88 (326)
T 2y0a_A 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88 (326)
T ss_dssp HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 3456999999999999999999876 488999999875432 135779999999999999999999999999999
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC----cEEEeeccC
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF----EAKVSDFGL 807 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~----~vkl~Dfg~ 807 (885)
.++||||+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++ .+||+|||.
T Consensus 89 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 164 (326)
T 2y0a_A 89 VILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164 (326)
T ss_dssp EEEEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence 99999999999999999754 45899999999999999999999 89999999999999998877 799999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+..+.... ......+|+.|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 165 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 220 (326)
T 2y0a_A 165 AHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220 (326)
T ss_dssp CEECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred CeECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC
Confidence 98765422 223457899999999999999999999999999999999999999653
No 92
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=5e-33 Score=299.78 Aligned_cols=202 Identities=33% Similarity=0.503 Sum_probs=168.1
Q ss_pred eeeEEeecceecccCCceEEEEEeCCCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
...+|++.+.||+|+||.||+|++ +++.||+|++..... ...+++.+|++++++++||||+++++++...+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 346799999999999999999987 578899999875442 22357889999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHHhccCCCC--ceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 737 EYMVNGSLDDWLRNRAA--SLDWGKRCKIAYGAARGISFLHHGFKPY--IIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~--~~~~~~~~~i~~~l~~~l~~LH~~~~~~--i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
||+++++|.+++..... .+++..+..++.|++.|++||| +.| |+||||||+||+++.++.+||+|||.++...
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 99999999999985432 2899999999999999999999 899 9999999999999999999999999997654
Q ss_pred CCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 813 DCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 813 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.. ........+|+.|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 191 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~ 242 (309)
T 3p86_A 191 ST-FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL 242 (309)
T ss_dssp ------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTS
T ss_pred cc-ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 32 22233457899999999999999999999999999999999999999753
No 93
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.6e-33 Score=302.53 Aligned_cols=200 Identities=20% Similarity=0.285 Sum_probs=177.8
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..+|++.+.||+|+||.||+|.+. +++.||+|.+.... .....+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 357999999999999999999876 47889999986543 3356788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC--CCcEEEeeccCcccccCCCC
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND--YFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~--~~~vkl~Dfg~a~~~~~~~~ 816 (885)
+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++. ++.+||+|||.+..+....
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~- 158 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD- 158 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC-
Confidence 9999999999876667999999999999999999999 899999999999999986 7899999999998765422
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......+++.|+|||++.+..++.++||||+||++|+|++|..||...
T Consensus 159 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 206 (321)
T 1tki_A 159 -NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAE 206 (321)
T ss_dssp -EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred -ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCC
Confidence 223456899999999999988999999999999999999999999754
No 94
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=6e-33 Score=301.47 Aligned_cols=207 Identities=37% Similarity=0.675 Sum_probs=182.2
Q ss_pred eeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
...+|++.+.||+|+||.||+|++.+++.||+|++........+.+.+|+++++.++||||+++++++..++..++||||
T Consensus 37 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (321)
T 2qkw_B 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKY 116 (321)
T ss_dssp CCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEEC
T ss_pred HHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEc
Confidence 34679999999999999999999888999999998776555567899999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 739 MVNGSLDDWLRNRA---ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 739 ~~~~sL~~~l~~~~---~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
+++++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+.......
T Consensus 117 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 193 (321)
T 2qkw_B 117 MENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELD 193 (321)
T ss_dssp CTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSS
T ss_pred CCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 99999999886532 34899999999999999999999 8999999999999999999999999999998754322
Q ss_pred -CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCC
Q 047790 816 -SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFED 868 (885)
Q Consensus 816 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~~ 868 (885)
........+++.|+|||++.+..++.++||||+|+++|||++|+.||....+.
T Consensus 194 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~ 247 (321)
T 2qkw_B 194 QTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR 247 (321)
T ss_dssp CCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSS
T ss_pred ccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcH
Confidence 22233345889999999999899999999999999999999999999865443
No 95
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=4.3e-33 Score=296.90 Aligned_cols=202 Identities=28% Similarity=0.448 Sum_probs=177.4
Q ss_pred eeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
...+|++.+.||+|+||.||+|++.++..||+|++.... ...+++.+|++++++++||||+++++++.+++..++||||
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 345799999999999999999999888899999997654 2357789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+++++|.+++......+++..+..++.|++.+++||| +.||+||||||+||+++.++.++|+|||.+..........
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (283)
T 3gen_A 101 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 177 (283)
T ss_dssp CTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHS
T ss_pred cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEcccccccccccccccc
Confidence 9999999999875566999999999999999999999 8999999999999999999999999999998765433233
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.....+++.|+|||++.+..++.++||||+|+++|+|++ |+.||..
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~ 224 (283)
T 3gen_A 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 224 (283)
T ss_dssp TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 334456788999999999999999999999999999998 9999874
No 96
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=5.8e-32 Score=294.84 Aligned_cols=274 Identities=21% Similarity=0.293 Sum_probs=147.1
Q ss_pred CCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEc
Q 047790 88 SSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDF 167 (885)
Q Consensus 88 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 167 (885)
+.|++|+|++|.+++..+..|+++++|++|+|++|++++..|..|+.+++|++|+|++|+++ .+|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 45666666666666555555666666666666666666555566666666666666666665 3444333 45666666
Q ss_pred cCCcCCccCCcccCCCCCCccccccccccCC-CCCcccccccccccEEEeecccCcccCCccccCCCcccceeccccccc
Q 047790 168 SGNGLNGTIPSRLGDLTQLQDLDLSDNLLSG-SLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQ 246 (885)
Q Consensus 168 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~ 246 (885)
++|++++..+..|.++++|++|++++|.++. .+....+.++++|++|++++|+++. +
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l--------------------- 186 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-I--------------------- 186 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-C---------------------
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-C---------------------
Confidence 6666555444455555555555555555531 1222334555555555555555441 1
Q ss_pred ccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCC
Q 047790 247 LSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSI 326 (885)
Q Consensus 247 ~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 326 (885)
|..+. ++|++|++++|++++..|..+..+++|++|+|++|.+++..+..+..+++|++|++++|+++ .+
T Consensus 187 --------~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~l 255 (330)
T 1xku_A 187 --------PQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KV 255 (330)
T ss_dssp --------CSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SC
T ss_pred --------Ccccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cC
Confidence 11111 45667777777776666666666667777777777666666666666666666666666665 33
Q ss_pred CcccCCC-CceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccc--cCcccccc
Q 047790 327 PEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTR--QIPKKIGN 403 (885)
Q Consensus 327 p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~ 403 (885)
|..+..+ .|++|++++|++++..+..|.... .......++.|++++|.+.. +.|..|..
T Consensus 256 p~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~------------------~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~ 317 (330)
T 1xku_A 256 PGGLADHKYIQVVYLHNNNISAIGSNDFCPPG------------------YNTKKASYSGVSLFSNPVQYWEIQPSTFRC 317 (330)
T ss_dssp CTTTTTCSSCCEEECCSSCCCCCCTTSSSCSS------------------CCTTSCCCSEEECCSSSSCGGGSCGGGGTT
T ss_pred ChhhccCCCcCEEECCCCcCCccChhhcCCcc------------------cccccccccceEeecCcccccccCcccccc
Confidence 3333333 344444444444443333322110 00112445566666665542 34455555
Q ss_pred cccccceecccc
Q 047790 404 LTNIQILKLNSN 415 (885)
Q Consensus 404 l~~L~~L~Ls~N 415 (885)
+.+++.++|++|
T Consensus 318 ~~~l~~l~L~~N 329 (330)
T 1xku_A 318 VYVRAAVQLGNY 329 (330)
T ss_dssp CCCGGGEEC---
T ss_pred ccceeEEEeccc
Confidence 555555555555
No 97
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.2e-32 Score=310.36 Aligned_cols=200 Identities=20% Similarity=0.250 Sum_probs=174.8
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
..+|++.+.||+|+||.||+|.+. +++.+|+|++..... ...+.+.+|+++++.++||||+++++++.+++..|+||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 356999999999999999999864 588999999875432 23457889999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc---CCCcEEEeeccCcccccC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN---DYFEAKVSDFGLARLISD 813 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~---~~~~vkl~Dfg~a~~~~~ 813 (885)
||++||+|.+.+..+. .+++..+..++.|++.|++||| +.||+||||||+||+++ +++.+||+|||.+.....
T Consensus 90 E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~ 165 (444)
T 3soa_A 90 DLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165 (444)
T ss_dssp CCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred EeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence 9999999999998654 4999999999999999999999 89999999999999998 467899999999987654
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.. .......||+.|+|||++.+..++.++||||+||++|+|++|+.||..
T Consensus 166 ~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~ 215 (444)
T 3soa_A 166 EQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD 215 (444)
T ss_dssp TC-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CC-ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCC
Confidence 32 223346799999999999999999999999999999999999999964
No 98
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.9e-32 Score=297.12 Aligned_cols=196 Identities=24% Similarity=0.310 Sum_probs=176.7
Q ss_pred EeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccC
Q 047790 663 IVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
|...++||+|+||.||+|+.. +|+.||+|++........+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 126 (321)
T 2c30_A 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQG 126 (321)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCS
T ss_pred hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCC
Confidence 666779999999999999876 6999999999766656667899999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
++|.+++.. ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+....... .....
T Consensus 127 ~~L~~~l~~--~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 200 (321)
T 2c30_A 127 GALTDIVSQ--VRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKRKS 200 (321)
T ss_dssp CBHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-CCBCC
T ss_pred CCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCc-ccccc
Confidence 999999874 34899999999999999999999 8999999999999999999999999999998765422 22334
Q ss_pred CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
..+|+.|+|||++.+..++.++||||+|+++|+|++|+.||..
T Consensus 201 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~ 243 (321)
T 2c30_A 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFS 243 (321)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 5789999999999999999999999999999999999999964
No 99
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=7.9e-33 Score=306.17 Aligned_cols=199 Identities=18% Similarity=0.205 Sum_probs=172.8
Q ss_pred eeEEeecceecccCCceEEEEE------eCCCCeEEEEEecccccccHHHHHHHHHHhcccC---CCCccceeeeeEeCC
Q 047790 660 IAIIVFENVIGGGGFRTAFKGT------MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVK---HQNLVQLLGYCSVGE 730 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~------~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~---~~~i~~~~~~~~~~~ 730 (885)
..+|++.++||+|+||.||+|. ...++.||+|++.... ...+..|+++++.++ |++|+++++++..++
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence 4679999999999999999994 4468899999987643 456677777777776 899999999999999
Q ss_pred eeEEEEecccCCCHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC----------
Q 047790 731 EKLLVYEYMVNGSLDDWLRN----RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND---------- 796 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~----~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~---------- 796 (885)
..++||||+++|+|.+++.. ....+++..++.++.|++.|++||| +.||+||||||+||+++.
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~~ 217 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDD 217 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC-----
T ss_pred CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCcccccc
Confidence 99999999999999999974 3455999999999999999999999 999999999999999988
Q ss_pred -CCcEEEeeccCcccccCC-CCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 797 -YFEAKVSDFGLARLISDC-ESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 797 -~~~vkl~Dfg~a~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.+.+||+|||.|+.+... .........||..|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 218 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 287 (365)
T 3e7e_A 218 LSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVK 287 (365)
T ss_dssp -CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEE
T ss_pred ccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCcccc
Confidence 899999999999765421 22333456799999999999999999999999999999999999999864
No 100
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.1e-32 Score=299.41 Aligned_cols=202 Identities=28% Similarity=0.434 Sum_probs=172.3
Q ss_pred eeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCC----eeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE----EKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~----~~~l 734 (885)
...+|++.++||+|+||.||+|++. ++.||+|++.... ........|+.++++++||||+++++++.... ..++
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 3468999999999999999999875 7889999986543 22345667999999999999999999987643 4699
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCC----------CceecCCCCCcEEEcCCCcEEEee
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP----------YIIHMDIKTSNILLNDYFEAKVSD 804 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~----------~i~H~dlkp~Nil~~~~~~vkl~D 804 (885)
||||+++++|.++++.. .+++..+..++.|++.|++||| +. +|+||||||+||+++.++.+||+|
T Consensus 100 v~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECC
T ss_pred EEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEcc
Confidence 99999999999999764 3899999999999999999999 88 999999999999999999999999
Q ss_pred ccCcccccCCCCC-cccCCCCCCccCCcccccCC-----CCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 805 FGLARLISDCESH-VSTDTADTIGYVPSEYGQAG-----RANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 805 fg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~-----~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
||.++.+...... ......+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+..+
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~ 243 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVD 243 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCC
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcc
Confidence 9999876543222 22335689999999998873 456688999999999999999999976543
No 101
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=5.6e-33 Score=301.83 Aligned_cols=205 Identities=27% Similarity=0.452 Sum_probs=176.0
Q ss_pred eeeeeEEeecceecccCCceEEEEEeC----CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCe
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMP----DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEE 731 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~----~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 731 (885)
.+...+|++.+.||+|+||.||+|.+. .+..||+|++.... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 45 ~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 124 (325)
T 3kul_A 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL 124 (325)
T ss_dssp BCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGC
T ss_pred ccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCc
Confidence 345567999999999999999999874 34569999997643 2334678999999999999999999999998899
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
.++||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+..+
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 125 AMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred cEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 99999999999999999876667999999999999999999999 899999999999999999999999999999877
Q ss_pred cCCCCC--cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 812 SDCESH--VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 812 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
...... ......++..|+|||++.+..++.++||||+||++|||++ |+.||..
T Consensus 202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~ 257 (325)
T 3kul_A 202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWN 257 (325)
T ss_dssp C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCccc
Confidence 543222 1222345778999999999999999999999999999999 9999854
No 102
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=6.4e-33 Score=307.37 Aligned_cols=201 Identities=20% Similarity=0.296 Sum_probs=179.2
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..+|++.+.||+|+||.||+|.+. +++.||+|++..........+.+|++++++++||||+++++++.++...++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 456999999999999999999875 5888999998766544556789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc--CCCcEEEeeccCcccccCCCC
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN--DYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~--~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++ ..+.+||+|||.+.......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~- 205 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE- 205 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCc-
Confidence 9999999999876667999999999999999999999 89999999999999997 45679999999998765432
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......+|+.|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 206 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~ 253 (387)
T 1kob_A 206 -IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE 253 (387)
T ss_dssp -CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred -ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCC
Confidence 223346899999999999999999999999999999999999999753
No 103
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-32 Score=298.32 Aligned_cols=205 Identities=23% Similarity=0.302 Sum_probs=177.2
Q ss_pred eeeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCC--eeE
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE--EKL 733 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~--~~~ 733 (885)
...++|++.++||+|+||.||+|++.. ++.||+|++.... ....+.+.+|++++++++||||+++++++.... ..+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (319)
T 4euu_A 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (319)
T ss_dssp CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEE
Confidence 446789999999999999999998765 8899999997544 334567889999999999999999999987655 779
Q ss_pred EEEecccCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE----cCCCcEEEeeccC
Q 047790 734 LVYEYMVNGSLDDWLRNRA--ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL----NDYFEAKVSDFGL 807 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~----~~~~~vkl~Dfg~ 807 (885)
+||||+++++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||++ +..+.+||+|||.
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~ 162 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (319)
T ss_dssp EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence 9999999999999998533 33899999999999999999999 8999999999999999 7778899999999
Q ss_pred cccccCCCCCcccCCCCCCccCCccccc--------CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQ--------AGRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~--------~~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
+....... ......++..|+|||++. +..++.++||||+||++|||++|+.||.+...
T Consensus 163 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 228 (319)
T 4euu_A 163 ARELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG 228 (319)
T ss_dssp CEECCTTC--CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTC
T ss_pred ceecCCCC--ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc
Confidence 98765432 223456899999999876 57789999999999999999999999976443
No 104
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.9e-32 Score=314.05 Aligned_cols=203 Identities=24% Similarity=0.280 Sum_probs=179.7
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
..+|++.++||+|+||.||+|++. +++.||+|++.+.. ......+.+|++++++++||||+++++++...+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 456999999999999999999875 58999999997543 23346788999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 736 YEYMVNGSLDDWLRNR---AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
|||++||+|.+++... ...+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||++..+.
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 9999999999998753 345899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 813 DCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 813 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
... .......||+.|+|||++.+..++.++|+||+||++|||++|+.||....
T Consensus 341 ~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~ 393 (543)
T 3c4z_A 341 AGQ-TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393 (543)
T ss_dssp TTC-CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTT
T ss_pred CCC-cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCc
Confidence 432 22334579999999999999999999999999999999999999997643
No 105
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=3.4e-33 Score=303.17 Aligned_cols=202 Identities=24% Similarity=0.367 Sum_probs=174.3
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
..+|++.++||+|+||.||+|++. +++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 467999999999999999999876 688999999864432 234568899999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC-C
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE-S 816 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~-~ 816 (885)
|+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+..+.... .
T Consensus 86 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 99999999988754 34899999999999999999999 8999999999999999999999999999998764322 2
Q ss_pred CcccCCCCCCccCCcccccCCCC-CCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.......+|+.|+|||++.+..+ +.++||||+||++|+|++|+.||...
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 211 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSS
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCC
Confidence 22334578999999999988776 77899999999999999999999754
No 106
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.1e-32 Score=297.14 Aligned_cols=198 Identities=24% Similarity=0.359 Sum_probs=154.6
Q ss_pred EEeec---ceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeEEEE
Q 047790 662 IIVFE---NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 662 ~~~~~---~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 736 (885)
+|++. +.||+|+||.||+|.+. +++.||+|++.+. ......+|+++++.+. ||||+++++++.++...|+||
T Consensus 9 ~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 85 (325)
T 3kn6_A 9 HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVM 85 (325)
T ss_dssp HEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred ccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEE
Confidence 46664 78999999999999875 5889999998654 2567789999999997 999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC---cEEEeeccCcccccC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF---EAKVSDFGLARLISD 813 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~---~vkl~Dfg~a~~~~~ 813 (885)
||+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++ .+||+|||.+.....
T Consensus 86 e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 161 (325)
T 3kn6_A 86 ELLNGGELFERIKKK-KHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP 161 (325)
T ss_dssp CCCCSCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC
T ss_pred EccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCC
Confidence 999999999999865 45999999999999999999999 89999999999999998665 799999999987654
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
.. .......+|+.|+|||++.+..++.++||||+||++|+|++|+.||.....
T Consensus 162 ~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~ 214 (325)
T 3kn6_A 162 DN-QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDR 214 (325)
T ss_dssp -----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC----
T ss_pred CC-CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcc
Confidence 22 223345679999999999999999999999999999999999999986443
No 107
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=3.2e-32 Score=297.08 Aligned_cols=292 Identities=19% Similarity=0.268 Sum_probs=191.2
Q ss_pred CCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCcccccc
Q 047790 113 RLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLS 192 (885)
Q Consensus 113 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 192 (885)
+++.++++++.++ .+|..+. ++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 6778888888877 5666653 677888888888876667777888888888888888877777777778888888888
Q ss_pred ccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCC
Q 047790 193 DNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNN 272 (885)
Q Consensus 193 ~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N 272 (885)
+|+++ .+|...+ ++|++|++++|++++..+..+ ..+++|++|++++|
T Consensus 111 ~n~l~-~l~~~~~---~~L~~L~l~~n~i~~~~~~~~-----------------------------~~l~~L~~L~l~~n 157 (332)
T 2ft3_A 111 KNHLV-EIPPNLP---SSLVELRIHDNRIRKVPKGVF-----------------------------SGLRNMNCIEMGGN 157 (332)
T ss_dssp SSCCC-SCCSSCC---TTCCEEECCSSCCCCCCSGGG-----------------------------SSCSSCCEEECCSC
T ss_pred CCcCC-ccCcccc---ccCCEEECCCCccCccCHhHh-----------------------------CCCccCCEEECCCC
Confidence 88777 6666543 567777777776653322223 23334444444444
Q ss_pred cccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCcc
Q 047790 273 KLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVS 352 (885)
Q Consensus 273 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~ 352 (885)
.++. .+..+..+..+ +|++|++++|++++ +|..+. ..|+.|++++|++++..+..
T Consensus 158 ~l~~----------------------~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~-~~L~~L~l~~n~i~~~~~~~ 212 (332)
T 2ft3_A 158 PLEN----------------------SGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP-ETLNELHLDHNKIQAIELED 212 (332)
T ss_dssp CCBG----------------------GGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC-SSCSCCBCCSSCCCCCCTTS
T ss_pred cccc----------------------CCCCcccccCC-ccCEEECcCCCCCc-cCcccc-CCCCEEECCCCcCCccCHHH
Confidence 4431 01222333333 44444444444443 222111 24555555555555555666
Q ss_pred ccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCC----
Q 047790 353 LWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDC---- 428 (885)
Q Consensus 353 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l---- 428 (885)
+..+++|+.|++++|.+.+..+..+..+++|++|+|++|+++ .+|..+..+++|+.|++++|+|+++.+..|...
T Consensus 213 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~ 291 (332)
T 2ft3_A 213 LLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGV 291 (332)
T ss_dssp STTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCS
T ss_pred hcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHcccccccc
Confidence 666777777777777777777767777788888888888887 567778888888888888888887766666653
Q ss_pred --CcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCcc
Q 047790 429 --ISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNL 480 (885)
Q Consensus 429 --~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~ 480 (885)
.+|+.|++++|.+.. .+..|..+..+++|+.+++++|+
T Consensus 292 ~~~~l~~L~l~~N~~~~--------------~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 292 KRAYYNGISLFNNPVPY--------------WEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SSCCBSEEECCSSSSCG--------------GGSCGGGGTTBCCSTTEEC----
T ss_pred ccccccceEeecCcccc--------------cccCcccccccchhhhhhccccc
Confidence 567888888887741 24667888888888888888875
No 108
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.9e-32 Score=291.89 Aligned_cols=198 Identities=24% Similarity=0.336 Sum_probs=172.7
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc--cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ--CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
.+|++.++||+|+||.||+|++. +++.||+|++...... ....+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 46999999999999999999875 5889999999754322 24678899999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|+++ ++.+.+......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+....... .
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 156 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV-R 156 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC-S
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcc-c
Confidence 9965 677766665667999999999999999999999 8999999999999999999999999999998765422 2
Q ss_pred cccCCCCCCccCCcccccCCC-CCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAGR-ANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
......+|..|+|||++.+.. ++.++||||+||++|+|++|..||.
T Consensus 157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~ 203 (292)
T 3o0g_A 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLF 203 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSC
T ss_pred cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCc
Confidence 233457899999999988766 7999999999999999999998864
No 109
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.5e-32 Score=300.89 Aligned_cols=199 Identities=23% Similarity=0.271 Sum_probs=175.4
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
..+|++.+.||+|+||.||+|.+. +++.||+|++..... ...+.+.+|+++++.++||||+++++++.+++..|+||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457999999999999999999875 588999999975432 23457889999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCC---CcEEEeeccCcccccC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY---FEAKVSDFGLARLISD 813 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~---~~vkl~Dfg~a~~~~~ 813 (885)
||+++++|.+++..+ ..+++..+..++.|++.|++||| +.||+||||||+||+++.+ +.+||+|||.+.....
T Consensus 108 e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 108 DLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp CCCCSCBHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred ecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 999999999998754 34899999999999999999999 8999999999999999854 4599999999987654
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.. ......+|+.|+|||++.+..++.++||||+||++|+|++|+.||..
T Consensus 184 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~ 232 (362)
T 2bdw_A 184 SE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 232 (362)
T ss_dssp CC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred Cc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 22 22345789999999999999999999999999999999999999964
No 110
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.5e-32 Score=315.41 Aligned_cols=203 Identities=24% Similarity=0.308 Sum_probs=179.7
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
...+|++.++||+|+||.||+|++. +++.||+|++.+.. ......+.+|+++++.++||||+++++++.+++..|+
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 3466999999999999999999875 58999999997542 2345678899999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 735 VYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
||||++||+|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||++..+..
T Consensus 262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 999999999999987543 34899999999999999999999 89999999999999999999999999999987654
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 339 ~~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~ 389 (576)
T 2acx_A 339 GQ--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389 (576)
T ss_dssp TC--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSS
T ss_pred Cc--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccc
Confidence 32 2234579999999999999999999999999999999999999997643
No 111
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=3.3e-33 Score=304.31 Aligned_cols=201 Identities=43% Similarity=0.782 Sum_probs=178.0
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..+|++.+.||+|+||.||+|+..+++.||+|++..... ....++.+|+++++.++||||+++++++..++..++||||
T Consensus 29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 108 (326)
T 3uim_A 29 SDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPY 108 (326)
T ss_dssp TTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEEC
T ss_pred hhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEe
Confidence 456999999999999999999988899999999976442 2234789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHhccCCC---CceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 739 MVNGSLDDWLRNRA---ASLDWGKRCKIAYGAARGISFLHHGFKP---YIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 739 ~~~~sL~~~l~~~~---~~~~~~~~~~i~~~l~~~l~~LH~~~~~---~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
+++++|.+++.... ..+++..+..++.|++.|++||| +. ||+||||||+||+++.++.+||+|||.+....
T Consensus 109 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 185 (326)
T 3uim_A 109 MANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH---DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 185 (326)
T ss_dssp CTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHH---HSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred ccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCeEeCCCchhhEEECCCCCEEeccCccccccC
Confidence 99999999998533 33899999999999999999999 66 99999999999999999999999999998876
Q ss_pred CCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 813 DCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 813 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
...........+|+.|+|||++.+..++.++||||+||++|+|++|+.||.
T Consensus 186 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 236 (326)
T 3uim_A 186 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 236 (326)
T ss_dssp SSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred cccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccc
Confidence 544444555669999999999998899999999999999999999999995
No 112
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.4e-32 Score=295.34 Aligned_cols=204 Identities=23% Similarity=0.313 Sum_probs=169.5
Q ss_pred eceeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc--------------------------cHHHHHHH
Q 047790 655 GSVLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ--------------------------CDREFAAE 707 (885)
Q Consensus 655 g~~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~--------------------------~~~~~~~E 707 (885)
+..+...+|++.+.||+|+||.||+|++. +++.||+|++...... ..+.+.+|
T Consensus 7 ~~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 86 (298)
T 2zv2_A 7 GDCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQE 86 (298)
T ss_dssp ---CEETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHH
T ss_pred CCceeecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHH
Confidence 34456678999999999999999999865 5888999998654211 12468899
Q ss_pred HHHhcccCCCCccceeeeeEe--CCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceec
Q 047790 708 METLDMVKHQNLVQLLGYCSV--GEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHM 785 (885)
Q Consensus 708 ~~~l~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~ 785 (885)
++++++++||||+++++++.+ ....++||||+++++|.++... ..+++..+..++.|++.|++||| +.||+||
T Consensus 87 ~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~ 161 (298)
T 2zv2_A 87 IAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLH---YQKIIHR 161 (298)
T ss_dssp HHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred HHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecc
Confidence 999999999999999999986 5688999999999999876543 45899999999999999999999 8999999
Q ss_pred CCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCCC---CCCcchhHHHHHHHHHHHhCCCCC
Q 047790 786 DIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGR---ANERGDIYSFGVILLELVTGKQPT 862 (885)
Q Consensus 786 dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---~~~~~DvwslGvvl~elltg~~P~ 862 (885)
||||+||+++.++.+||+|||.+..+.... .......+|+.|+|||++.+.. ++.++||||+||++|+|++|+.||
T Consensus 162 Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf 240 (298)
T 2zv2_A 162 DIKPSNLLVGEDGHIKIADFGVSNEFKGSD-ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240 (298)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCEECSSSS-CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSS
T ss_pred CCCHHHEEECCCCCEEEecCCCcccccccc-ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCC
Confidence 999999999999999999999998765432 2223457899999999988765 377899999999999999999999
Q ss_pred CC
Q 047790 863 GP 864 (885)
Q Consensus 863 ~~ 864 (885)
..
T Consensus 241 ~~ 242 (298)
T 2zv2_A 241 MD 242 (298)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 113
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.6e-32 Score=303.59 Aligned_cols=203 Identities=28% Similarity=0.470 Sum_probs=175.1
Q ss_pred eeEEeecceecccCCceEEEEEeC--------CCCeEEEEEeccccc-ccHHHHHHHHHHhccc-CCCCccceeeeeEeC
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP--------DQKTVAVKKLSQATG-QCDREFAAEMETLDMV-KHQNLVQLLGYCSVG 729 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~--------~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~ 729 (885)
..+|++.+.||+|+||.||+|++. ++..||+|+++.... ...+++.+|+++++.+ +||||+++++++..+
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 356999999999999999999753 345699999976532 2346789999999999 899999999999999
Q ss_pred CeeEEEEecccCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE
Q 047790 730 EEKLLVYEYMVNGSLDDWLRNRA---------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL 794 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~~~---------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~ 794 (885)
+..|+||||+++|+|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEE
Confidence 99999999999999999998643 34789999999999999999999 8999999999999999
Q ss_pred cCCCcEEEeeccCcccccCCCC-CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 795 NDYFEAKVSDFGLARLISDCES-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 795 ~~~~~vkl~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
+.++.+||+|||.++....... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~ 309 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 309 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 9999999999999987654322 12233456788999999999999999999999999999999 99998753
No 114
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=7.1e-33 Score=299.38 Aligned_cols=203 Identities=25% Similarity=0.395 Sum_probs=168.6
Q ss_pred eeeEEeecceecccCCceEEEEEe-CCCCeEEEEEeccccccc---HHHHHHHHHHhcccCCCCccceeeeeEeCC----
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQC---DREFAAEMETLDMVKHQNLVQLLGYCSVGE---- 730 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~---- 730 (885)
...+|++.+.||+|+||.||+|++ .+++.||+|++....... ..++.+|++++++++||||+++++++....
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 456799999999999999999986 568899999997654322 356889999999999999999999987654
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
..|+||||+++++|.+++.... .+++..+..++.|++.+++||| +++|+||||||+||+++.++.+||+|||.+..
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred ccEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 3499999999999999998654 4899999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCCC--cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 811 ISDCESH--VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 811 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+...... ......+++.|+|||++.+..++.++||||+|+++|+|++|+.||...
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~ 222 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 6543221 223346899999999999999999999999999999999999999754
No 115
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.4e-32 Score=312.35 Aligned_cols=202 Identities=18% Similarity=0.219 Sum_probs=168.4
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
...+|++.++||+|+||.||+|.+. +++.||+|++.... .....++.+|+++++.++||||+++++++...+..++
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 3467999999999999999999865 58899999997542 2334567889999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCC-CCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFK-PYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~-~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
||||+++++|.+++.... .+++..+..++.|++.|++||| + .||+||||||+||+++.++.+||+|||+|.....
T Consensus 226 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp EECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EEeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 999999999999997654 5899999999999999999999 7 8999999999999999999999999999976433
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 302 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 352 (446)
T 4ejn_A 302 DG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 352 (446)
T ss_dssp ------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CC-cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCC
Confidence 22 2234467999999999999999999999999999999999999999653
No 116
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=3.2e-32 Score=308.85 Aligned_cols=203 Identities=25% Similarity=0.423 Sum_probs=179.6
Q ss_pred eeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
.+.+++|.+.+.||+|+||.||+|++. +|+.||+|++.... ......+.+|+++++.++||||+++++++...+..
T Consensus 12 ~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 91 (476)
T 2y94_A 12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDI 91 (476)
T ss_dssp CCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred CceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 455678999999999999999999876 68999999997543 22346789999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
++||||+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+....
T Consensus 92 ~lv~E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~ 167 (476)
T 2y94_A 92 FMVMEYVSGGELFDYICKN-GRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167 (476)
T ss_dssp EEEEECCSSEEHHHHTTSS-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence 9999999999999999754 45999999999999999999999 9999999999999999999999999999998765
Q ss_pred CCCCCcccCCCCCCccCCcccccCCCC-CCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 813 DCESHVSTDTADTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 813 ~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.. .......+++.|+|||++.+..+ +.++||||+||++|+|++|+.||...
T Consensus 168 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~ 219 (476)
T 2y94_A 168 DG--EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD 219 (476)
T ss_dssp TT--CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cc--ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCC
Confidence 42 22334579999999999998876 68999999999999999999999753
No 117
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=6.2e-32 Score=286.94 Aligned_cols=199 Identities=22% Similarity=0.279 Sum_probs=177.4
Q ss_pred eeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..+|++.++||+|+||.||+|.+.. +..||+|++........+.+.+|++++++++||||+++++++.++...++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 4569999999999999999998765 778999999876666678899999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE---cCCCcEEEeeccCcccccCCC
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL---NDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~---~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||++ +.++.++|+|||.+..+....
T Consensus 88 ~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 88 CTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp CCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred cCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 99999999887654 4899999999999999999999 8999999999999999 788899999999998765432
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......+++.|+|||++.+. ++.++||||+|+++|+|++|+.||...
T Consensus 164 --~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~ 210 (277)
T 3f3z_A 164 --MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAP 210 (277)
T ss_dssp --CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred --chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCC
Confidence 23345689999999998765 899999999999999999999999753
No 118
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.8e-31 Score=291.02 Aligned_cols=251 Identities=23% Similarity=0.324 Sum_probs=143.5
Q ss_pred CCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccc
Q 047790 112 KRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDL 191 (885)
Q Consensus 112 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 191 (885)
.+++.++++++.++ .+|..+. ++|++|+|++|++++..+..|+++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 35777777777776 4565543 56777777777777665666777777777777777777666777777777777777
Q ss_pred cccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecC
Q 047790 192 SDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSN 271 (885)
Q Consensus 192 s~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~ 271 (885)
++|+++ .+|..++ ++|++|++++|+++
T Consensus 108 s~n~l~-~l~~~~~---~~L~~L~l~~n~l~------------------------------------------------- 134 (330)
T 1xku_A 108 SKNQLK-ELPEKMP---KTLQELRVHENEIT------------------------------------------------- 134 (330)
T ss_dssp CSSCCS-BCCSSCC---TTCCEEECCSSCCC-------------------------------------------------
T ss_pred CCCcCC-ccChhhc---ccccEEECCCCccc-------------------------------------------------
Confidence 777776 5655432 45555555555554
Q ss_pred CcccccccccccCCCCCcEEEccCCCCcC--cccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCcccccc
Q 047790 272 NKLSGPIPRELCNSGSLVEINLDGNMLSG--TIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVI 349 (885)
Q Consensus 272 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~ 349 (885)
+..+..+..+++|++|++++|.++. ..+..+..+++|++|++++|+++. +|..+. ..|++|++++|++++..
T Consensus 135 ----~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~-~~L~~L~l~~n~l~~~~ 208 (330)
T 1xku_A 135 ----KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP-PSLTELHLDGNKITKVD 208 (330)
T ss_dssp ----BBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC-TTCSEEECTTSCCCEEC
T ss_pred ----ccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc-ccCCEEECCCCcCCccC
Confidence 3333334444444444444444432 344455556666666666666553 222211 24555566666655555
Q ss_pred CccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCcc
Q 047790 350 PVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEF 425 (885)
Q Consensus 350 p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 425 (885)
|..+..+++|++|++++|.+.+..+..+..+++|++|+|++|+++ .+|..+..+++|++|++++|+|+++.+..|
T Consensus 209 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f 283 (330)
T 1xku_A 209 AASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDF 283 (330)
T ss_dssp TGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSS
T ss_pred HHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhc
Confidence 555555555555555555555444444555555555555555554 344455555555555555555554444444
No 119
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.98 E-value=2.1e-32 Score=288.87 Aligned_cols=201 Identities=28% Similarity=0.468 Sum_probs=179.4
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..+|++.+.||+|+||.||+|.+.+++.||+|++..... ..+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 356999999999999999999998888999999976543 3578899999999999999999999999989999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
++++|.+++......+++..+..++.|++.|++||| +.|++||||||+||+++.++.++|+|||.+...........
T Consensus 86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 162 (267)
T 3t9t_A 86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162 (267)
T ss_dssp TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence 999999999876667899999999999999999999 89999999999999999999999999999987654222223
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
....++..|+|||+..+..++.++||||+|+++|+|++ |+.||..
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 208 (267)
T 3t9t_A 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 208 (267)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCC
Confidence 34456788999999998999999999999999999999 8999864
No 120
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.98 E-value=1.7e-32 Score=297.04 Aligned_cols=201 Identities=25% Similarity=0.357 Sum_probs=161.1
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
..+|++.+.||+|+||.||+|.+. +++.||+|++.... ......+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467999999999999999999875 48899999987543 2334678899999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 738 YMVNGSLDDWLRNRA-----ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~-----~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
|++ ++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+....
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 997 59999887532 34899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCCCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 813 DCESHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 813 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
... .......+|+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 160 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 212 (317)
T 2pmi_A 160 IPV-NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGT 212 (317)
T ss_dssp SCC-CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CCc-ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 422 222345689999999998764 6899999999999999999999999754
No 121
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.98 E-value=6.9e-32 Score=291.29 Aligned_cols=201 Identities=21% Similarity=0.289 Sum_probs=166.3
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccccc---HHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQC---DREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
+++|++.+.||+|+||.||+|.+. +++.||+|++....... .+.+.+|++++++++||||+++++++..++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 467999999999999999999875 58889999997654332 36788999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+++++|.+++.... .+++..+..++.|++.+++||| +.||+||||||+||+++.++.+||+|||.+.......
T Consensus 113 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred EEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 99999999999998653 4899999999999999999999 8999999999999999999999999999988765433
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
........++..|+|||++.+..++.++||||+|+++|+|++|+.||..
T Consensus 189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 237 (309)
T 2h34_A 189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQG 237 (309)
T ss_dssp --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCS
T ss_pred cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCC
Confidence 3333445689999999999999999999999999999999999999964
No 122
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.98 E-value=1.1e-32 Score=295.54 Aligned_cols=204 Identities=28% Similarity=0.431 Sum_probs=173.2
Q ss_pred eeeeEEeecceecccCCceEEEEEe-----CCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEe--CC
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTM-----PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV--GE 730 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~-----~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~--~~ 730 (885)
+...+|++.++||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++.. ..
T Consensus 7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 3456799999999999999999983 3588999999986655555788999999999999999999998854 35
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
..++||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+..
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~ 163 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKV 163 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred ceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCccccc
Confidence 689999999999999999876666999999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCCC--cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 811 ISDCESH--VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 811 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
....... ......++..|+|||++.+..++.++||||+|+++|||++|..||..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~ 219 (295)
T 3ugc_A 164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219 (295)
T ss_dssp ------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCS
T ss_pred ccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCC
Confidence 6543221 22234467789999999999999999999999999999999998764
No 123
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.98 E-value=3.4e-32 Score=300.90 Aligned_cols=199 Identities=26% Similarity=0.348 Sum_probs=171.0
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
.+...+.||+|+||.||+|... +++.||+|++........+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 90 ~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~ 169 (373)
T 2x4f_A 90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVD 169 (373)
T ss_dssp EEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred eeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCC
Confidence 3444778999999999999864 588999999987655556789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE--cCCCcEEEeeccCcccccCCCCCc
Q 047790 741 NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL--NDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 741 ~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~--~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+++|.+++......+++..+..++.|++.|++||| +.||+||||||+||++ +..+.+||+|||.+..+.... .
T Consensus 170 ~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~--~ 244 (373)
T 2x4f_A 170 GGELFDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--K 244 (373)
T ss_dssp TCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC--B
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc--c
Confidence 99999988766556899999999999999999999 8999999999999999 567789999999998775432 2
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....+|+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 291 (373)
T 2x4f_A 245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGD 291 (373)
T ss_dssp CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence 23446899999999999999999999999999999999999999754
No 124
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.98 E-value=2.6e-32 Score=300.71 Aligned_cols=200 Identities=23% Similarity=0.273 Sum_probs=165.9
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..+|++.+.||+|+||.||+|++. +++.||+|++..... ..+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 457999999999999999999876 688999999975442 346788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc--EEEeeccCcccccCCCC
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE--AKVSDFGLARLISDCES 816 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~--vkl~Dfg~a~~~~~~~~ 816 (885)
+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++. +||+|||.++.....
T Consensus 98 ~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~-- 171 (361)
T 3uc3_A 98 ASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-- 171 (361)
T ss_dssp CCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc--
Confidence 99999999997544 4999999999999999999999 899999999999999987665 999999998754321
Q ss_pred CcccCCCCCCccCCcccccCCCCCCc-chhHHHHHHHHHHHhCCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANER-GDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~-~DvwslGvvl~elltg~~P~~~~~ 866 (885)
.......+|+.|+|||++.+..++.+ +||||+||++|+|++|+.||....
T Consensus 172 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 222 (361)
T 3uc3_A 172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPE 222 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC---
T ss_pred CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCc
Confidence 22234568999999999988887655 899999999999999999997643
No 125
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.98 E-value=6.2e-32 Score=290.23 Aligned_cols=204 Identities=19% Similarity=0.256 Sum_probs=178.3
Q ss_pred eeeeeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEE
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~l 734 (885)
.++..+|++.+.||+|+||.||+|.+ .+++.||+|++.... ....+.+|+++++.+ +|++++++++++......++
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 83 (298)
T 1csn_A 6 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL 83 (298)
T ss_dssp CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred cccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEE
Confidence 34556799999999999999999986 568899999986543 234678899999999 69999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc-----EEEeeccCcc
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE-----AKVSDFGLAR 809 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~-----vkl~Dfg~a~ 809 (885)
||||+ +++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++. +||+|||.+.
T Consensus 84 v~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~ 159 (298)
T 1csn_A 84 VIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159 (298)
T ss_dssp EEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred EEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence 99999 99999999876667999999999999999999999 999999999999999987765 9999999998
Q ss_pred cccCCCCC------cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 810 LISDCESH------VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 810 ~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
........ ......+|+.|+|||++.+..++.++||||+|+++|||++|+.||....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 222 (298)
T 1csn_A 160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 222 (298)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred ccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhh
Confidence 77543221 2234568999999999999999999999999999999999999997643
No 126
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.98 E-value=3.6e-32 Score=288.92 Aligned_cols=202 Identities=23% Similarity=0.391 Sum_probs=158.7
Q ss_pred eeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
+.+|++.+.||+|+||.||+|++ .+++.||+|++.... .....++.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35699999999999999999987 468899999986532 22346789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+.......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 9999999999999876667999999999999999999999 8999999999999999999999999999998765322
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
. ......+++.|+|||++.+..++.++||||+|+++|+|++|+.||...
T Consensus 167 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 215 (278)
T 3cok_A 167 E-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTD 215 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCC
T ss_pred C-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCh
Confidence 1 223456899999999999999999999999999999999999999754
No 127
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.98 E-value=3.7e-32 Score=298.20 Aligned_cols=198 Identities=23% Similarity=0.325 Sum_probs=160.3
Q ss_pred eeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..+|++.+.||+|+||.||+|++.. ++.||+|++.... ..+.+.+|++++++++||||+++++++...+..++||||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 3569999999999999999998764 7889999987543 345688899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC---CCcEEEeeccCcccccCCC
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND---YFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~---~~~vkl~Dfg~a~~~~~~~ 815 (885)
+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++. ++.+||+|||.+......
T Consensus 130 ~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~- 204 (349)
T 2w4o_A 130 VTGGELFDRIVEK-GYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ- 204 (349)
T ss_dssp CCSCBHHHHHTTC-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc-
Confidence 9999999999754 34899999999999999999999 899999999999999975 789999999999876432
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.......+|+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 205 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 253 (349)
T 2w4o_A 205 -VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDE 253 (349)
T ss_dssp ---------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCT
T ss_pred -cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCC
Confidence 2223456899999999999999999999999999999999999999653
No 128
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.98 E-value=1.6e-31 Score=286.46 Aligned_cols=203 Identities=24% Similarity=0.318 Sum_probs=178.4
Q ss_pred eeeeEEeecceecccCCceEEEEEeCC-CCeEEEEEeccccc---ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATG---QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
....+|++.+.||+|+||.||+|.+.+ ++.||+|++..... ...+.+.+|+++++.++||||+++++++.+++..+
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (294)
T 2rku_A 12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF 91 (294)
T ss_dssp TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEE
Confidence 345789999999999999999998764 78899999865432 23457889999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+.....
T Consensus 92 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 167 (294)
T 2rku_A 92 VVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 167 (294)
T ss_dssp EEEECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence 9999999999999887543 4899999999999999999999 89999999999999999999999999999987653
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.. .......++..|+|||++.+..++.++||||+|+++|+|++|+.||...
T Consensus 168 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 218 (294)
T 2rku_A 168 DG-ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 218 (294)
T ss_dssp TT-CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred Cc-cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 22 2233456899999999999999999999999999999999999999753
No 129
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98 E-value=2e-32 Score=301.17 Aligned_cols=203 Identities=26% Similarity=0.313 Sum_probs=175.1
Q ss_pred eeeEEeecceecccCCceEEEEEe----CCCCeEEEEEecccc----cccHHHHHHHHHHhccc-CCCCccceeeeeEeC
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTM----PDQKTVAVKKLSQAT----GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVG 729 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~----~~~~~valK~~~~~~----~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~ 729 (885)
.+.+|++.+.||+|+||.||+|+. .+++.||+|++++.. ......+.+|+++++.+ +||||+++++++..+
T Consensus 52 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 131 (355)
T 1vzo_A 52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE 131 (355)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred cccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeC
Confidence 346799999999999999999987 368999999987542 22345677899999999 599999999999999
Q ss_pred CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcc
Q 047790 730 EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLAR 809 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~ 809 (885)
...++||||+++++|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 132 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 132 TKLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp TEEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred ceEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 99999999999999999998654 4899999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCCCcccCCCCCCccCCcccccC--CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 810 LISDCESHVSTDTADTIGYVPSEYGQA--GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.+............+|+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~ 265 (355)
T 1vzo_A 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD 265 (355)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCT
T ss_pred ecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccC
Confidence 765433333444578999999999886 34789999999999999999999999754
No 130
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.98 E-value=2.3e-32 Score=302.45 Aligned_cols=202 Identities=28% Similarity=0.480 Sum_probs=164.9
Q ss_pred eeEEeecceecccCCceEEEEEeC----CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP----DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~----~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
...|.+.+.||+|+||.||+|++. ++..||+|+++... ....+++.+|++++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 356899999999999999999865 57789999997543 2334678999999999999999999999999899999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.++.....
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 99999999999999877667999999999999999999999 899999999999999999999999999999876543
Q ss_pred CCCc--ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 815 ESHV--STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 815 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.... .....++..|+|||++.+..++.++|||||||++||+++ |+.||..
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~ 253 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTT
T ss_pred CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCC
Confidence 2211 112234678999999999999999999999999999998 9999864
No 131
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.98 E-value=1.7e-31 Score=291.57 Aligned_cols=202 Identities=24% Similarity=0.323 Sum_probs=178.3
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEeccccc---ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATG---QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
...+|++.+.||+|+||.||+|.+.+ ++.||+|++..... ...+.+.+|+++++.++||||+++++++.+++..++
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 45789999999999999999998765 78899999875432 234678899999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+++++|.+++.... .+++..+..++.|++.+++||| +.||+||||||+||+++.++.+||+|||.+......
T Consensus 119 v~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 119 VLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp EECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 999999999999987643 4899999999999999999999 899999999999999999999999999999876532
Q ss_pred CCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
. .......++..|+|||++.+..++.++||||+|+++|+|++|+.||...
T Consensus 195 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 244 (335)
T 2owb_A 195 G-ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 244 (335)
T ss_dssp T-CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred c-ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCC
Confidence 2 2233456899999999999999999999999999999999999999753
No 132
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.98 E-value=5.6e-32 Score=296.49 Aligned_cols=200 Identities=24% Similarity=0.360 Sum_probs=168.1
Q ss_pred eeeEEeecceecccCCceEEEEEeCCCCeEEEEEeccccc--ccHHHHHHHHHHhcccCC--CCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATG--QCDREFAAEMETLDMVKH--QNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~--~~i~~~~~~~~~~~~~~l 734 (885)
...+|++.+.||+|+||.||+|...+++.||+|++..... .....+.+|++++++++| |||+++++++..+...++
T Consensus 7 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 7 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp SSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred ecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 3567999999999999999999998899999999875432 234678899999999986 999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
|||+ .+++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++ ++.+||+|||.+..+...
T Consensus 87 v~e~-~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~ 160 (343)
T 3dbq_A 87 VMEC-GNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 160 (343)
T ss_dssp EECC-CSEEHHHHHHHS-CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred EEeC-CCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence 9995 588999999864 45899999999999999999999 89999999999999997 568999999999876543
Q ss_pred CCC-cccCCCCCCccCCcccccC-----------CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 815 ESH-VSTDTADTIGYVPSEYGQA-----------GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 815 ~~~-~~~~~~~~~~y~aPE~~~~-----------~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 222 (343)
T 3dbq_A 161 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 222 (343)
T ss_dssp ---------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchh
Confidence 222 2334578999999999865 6788899999999999999999999974
No 133
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.98 E-value=9e-36 Score=341.20 Aligned_cols=63 Identities=22% Similarity=0.293 Sum_probs=32.4
Q ss_pred CCCCEEeccCCcCCCCCCcc-ccccccccEeeeeccCCCC----CCCccccCCccCceEEccCCcCCc
Q 047790 112 KRLKMLSVGENQLSGSIPSQ-LGLLTRLETISLRSNSFTG----EMPSELGDIKQLKSLDFSGNGLNG 174 (885)
Q Consensus 112 ~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~ 174 (885)
++|++|+|++|+++...... +..+++|++|+|++|.++. .++..+..+++|++|+|++|++++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~ 70 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGD 70 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHH
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCCh
Confidence 34556666666655332222 4455556666666665553 223444455555555555555543
No 134
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.98 E-value=1e-31 Score=289.88 Aligned_cols=202 Identities=26% Similarity=0.335 Sum_probs=169.6
Q ss_pred eeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-----cccHHHHHHHHHHhcccC---CCCccceeeeeEe
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-----GQCDREFAAEMETLDMVK---HQNLVQLLGYCSV 728 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-----~~~~~~~~~E~~~l~~l~---~~~i~~~~~~~~~ 728 (885)
+...+|++.++||+|+||.||+|++. +++.||+|++.... ......+.+|+++++.++ ||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 34578999999999999999999864 58899999986432 122356777888877765 9999999999876
Q ss_pred CC-----eeEEEEecccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEE
Q 047790 729 GE-----EKLLVYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKV 802 (885)
Q Consensus 729 ~~-----~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl 802 (885)
.. ..++||||+. ++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEE
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEE
Confidence 54 5789999996 59999998643 33899999999999999999999 899999999999999999999999
Q ss_pred eeccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 803 SDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 803 ~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+|||.+...... .......+|+.|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 162 ~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 222 (308)
T 3g33_A 162 ADFGLARIYSYQ--MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 222 (308)
T ss_dssp CSCSCTTTSTTC--CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCS
T ss_pred eeCccccccCCC--cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999876532 2223457899999999999999999999999999999999999999653
No 135
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.98 E-value=1.1e-31 Score=299.82 Aligned_cols=203 Identities=18% Similarity=0.232 Sum_probs=176.3
Q ss_pred eeEEeecceeccc--CCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 660 IAIIVFENVIGGG--GFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 660 ~~~~~~~~~lG~G--~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
+++|++.++||+| +||.||+|++. +++.||+|++..... .....+.+|+++++.++||||+++++++..++..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4679999999999 99999999876 589999999975432 234568889999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 735 VYEYMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
||||+++++|.+++... ...+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 99999999999999754 345899999999999999999999 89999999999999999999999999998865432
Q ss_pred CC------CCcccCCCCCCccCCcccccC--CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 814 CE------SHVSTDTADTIGYVPSEYGQA--GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 814 ~~------~~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.. ........++..|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 240 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 240 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence 11 111223468889999999988 67899999999999999999999999754
No 136
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.98 E-value=8.3e-32 Score=319.46 Aligned_cols=202 Identities=23% Similarity=0.261 Sum_probs=177.7
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~ 733 (885)
...+|++.++||+|+||.||+|++.. ++.||+|++++.. ....+.+..|.+++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 34679999999999999999998764 7889999997542 23456788899999887 6899999999999999999
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||+++|+|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||+|+....
T Consensus 419 lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 9999999999999998654 4999999999999999999999 89999999999999999999999999999986433
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
. ........||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 495 ~-~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~ 545 (674)
T 3pfq_A 495 D-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 545 (674)
T ss_dssp T-TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred C-CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCC
Confidence 2 22344567999999999999999999999999999999999999999753
No 137
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.98 E-value=6e-32 Score=298.87 Aligned_cols=202 Identities=19% Similarity=0.253 Sum_probs=169.1
Q ss_pred eeEEeecceecccCCceEEEEEeCC------CCeEEEEEecccccc-----------cHHHHHHHHHHhcccCCCCccce
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD------QKTVAVKKLSQATGQ-----------CDREFAAEMETLDMVKHQNLVQL 722 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~------~~~valK~~~~~~~~-----------~~~~~~~E~~~l~~l~~~~i~~~ 722 (885)
..+|++.++||+|+||.||+|.+.. ++.||+|++...... .......|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 3589999999999999999998755 478999998654311 11234456666778889999999
Q ss_pred eeeeEeC----CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc--C
Q 047790 723 LGYCSVG----EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN--D 796 (885)
Q Consensus 723 ~~~~~~~----~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~--~ 796 (885)
++++... ...++||||+ +++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++ .
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESSC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecCC
Confidence 9998764 4579999999 99999999877677999999999999999999999 89999999999999998 8
Q ss_pred CCcEEEeeccCcccccCCCCCc------ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 797 YFEAKVSDFGLARLISDCESHV------STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 797 ~~~vkl~Dfg~a~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
++.+||+|||.++.+....... .....+|+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~ 264 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDN 264 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 8999999999998765432111 12344899999999999999999999999999999999999999753
No 138
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.98 E-value=1.1e-31 Score=285.26 Aligned_cols=200 Identities=26% Similarity=0.411 Sum_probs=173.6
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
...+|++.+.||+|+||.||+|.+.. ++.||+|++.... ......+.+|+++++.++||||+++++++.+....++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 45679999999999999999998654 7789999986532 2235678899999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+......
T Consensus 87 v~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp EECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 999999999999998654 4899999999999999999999 999999999999999999999999999988654432
Q ss_pred CCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......++..|+|||++.+..++.++||||+|+++|+|++|+.||...
T Consensus 163 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 210 (279)
T 3fdn_A 163 ---RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred ---cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCC
Confidence 223456899999999999999999999999999999999999999743
No 139
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.98 E-value=8.3e-32 Score=291.15 Aligned_cols=201 Identities=26% Similarity=0.332 Sum_probs=169.6
Q ss_pred eeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccc--cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQ--CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
..+|++.++||+|+||.||+|.+.. ++.||+|++...... ..+.+.+|++++++++||||+++++++...+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 4679999999999999999998764 889999998654422 2456789999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
||++++++.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+........
T Consensus 82 e~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 82 EYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp ECCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred EeCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence 999999999887744 45899999999999999999999 89999999999999999999999999999987654222
Q ss_pred CcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......++..|+|||++.+ ..++.++||||+|+++|+|++|+.||...
T Consensus 158 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 206 (311)
T 4agu_A 158 -YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGK 206 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred -ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 2234568999999999876 56799999999999999999999999754
No 140
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.98 E-value=6.4e-32 Score=290.94 Aligned_cols=201 Identities=28% Similarity=0.453 Sum_probs=168.4
Q ss_pred eeeEEeecceecccCCceEEEEEeCCCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
...+|++.++||+|+||.||+|++.. .+|+|+++.... ...+.+.+|++++++++||||+++++++. ++..++||
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~ 110 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVT 110 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred cccceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEE
Confidence 34568999999999999999998643 588888765332 23467889999999999999999999875 45688999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC-C
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC-E 815 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~-~ 815 (885)
||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||++++++.+||+|||.+...... .
T Consensus 111 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~ 187 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp ECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC------
T ss_pred ecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceecccccc
Confidence 999999999999877777999999999999999999999 899999999999999999999999999999765431 1
Q ss_pred CCcccCCCCCCccCCccccc---CCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQ---AGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
........+|+.|+|||++. +..++.++||||+||++|||++|+.||...
T Consensus 188 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~ 240 (307)
T 3lb7_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHI 240 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccC
Confidence 22233456899999999886 567888999999999999999999999753
No 141
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.98 E-value=2.7e-32 Score=290.35 Aligned_cols=203 Identities=25% Similarity=0.378 Sum_probs=164.1
Q ss_pred eeeEEeecceecccCCceEEEEEeCC----CCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD----QKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~----~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
...+|++.+.||+|+||.||+|.+.. +..||+|++..... ...+.+.+|++++++++||||+++++++. ++..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 34679999999999999999998643 45699999875432 23467889999999999999999999984 56789
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+.....
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168 (281)
T ss_dssp EEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred EEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccCc
Confidence 999999999999999876667999999999999999999999 89999999999999999999999999999987654
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
..........+++.|+|||++.+..++.++||||+|+++|||++ |..||...
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~ 221 (281)
T 1mp8_A 169 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 221 (281)
T ss_dssp ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred ccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcC
Confidence 33333333456788999999999999999999999999999997 99999754
No 142
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.98 E-value=7e-32 Score=286.18 Aligned_cols=200 Identities=21% Similarity=0.377 Sum_probs=154.4
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
.+++|++.++||+|+||.||+|++. +++.||+|++.... ......+.+|+++++.++||||+++++++.+++..++
T Consensus 11 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (275)
T 2eue_A 11 HIGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM 90 (275)
T ss_dssp BCCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEE
T ss_pred cccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEE
Confidence 4567999999999999999999864 58899999987543 2335678899999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+ ++++.+.+... ..+++..+..++.|++.|++||| +.||+||||||+||++++++.+||+|||.+......
T Consensus 91 v~e~~-~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 165 (275)
T 2eue_A 91 VIEYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp EEECC-CEEHHHHHHTS-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC------
T ss_pred Eehhc-CCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceeccCc
Confidence 99999 67888888754 34899999999999999999999 899999999999999999999999999999766542
Q ss_pred CCCcccCCCCCCccCCcccccCCCC-CCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
. ......+++.|+|||++.+..+ +.++||||+|+++|+|++|+.||...
T Consensus 166 ~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 215 (275)
T 2eue_A 166 N--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 215 (275)
T ss_dssp -----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred c--cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCC
Confidence 2 2233468999999999988765 78999999999999999999999753
No 143
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.97 E-value=3.5e-32 Score=297.03 Aligned_cols=197 Identities=23% Similarity=0.319 Sum_probs=170.7
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
...+|++.+.||+|+||.||+|.+. +++.||+|++.+.... ..+|++++.++ +||||+++++++.+++..|+||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 3456999999999999999999876 4888999999765422 34688888887 7999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCC----CcEEEeeccCccccc
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY----FEAKVSDFGLARLIS 812 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~----~~vkl~Dfg~a~~~~ 812 (885)
||++||+|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||++.+. +.+||+|||.+....
T Consensus 96 E~~~gg~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 96 ELMKGGELLDKILRQ-KFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp CCCCSCBHHHHHHTC-TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred eCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 999999999999854 45899999999999999999999 8999999999999998533 359999999998765
Q ss_pred CCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 813 DCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 813 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
... .......+|+.|+|||++.+..++.++||||+||++|+|++|+.||..
T Consensus 172 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 222 (342)
T 2qr7_A 172 AEN-GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFAN 222 (342)
T ss_dssp CTT-CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred CCC-CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCC
Confidence 432 223445789999999999888899999999999999999999999975
No 144
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.97 E-value=4.7e-32 Score=295.32 Aligned_cols=204 Identities=23% Similarity=0.307 Sum_probs=165.7
Q ss_pred ceeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc--cHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 656 SVLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ--CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 656 ~~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
....+.+|++.++||+|+||.||+|.+. +++.||+|++...... ....+.+|++++++++||||+++++++.+++..
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (329)
T 3gbz_A 29 SATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRL 108 (329)
T ss_dssp ---CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEE
T ss_pred cccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEE
Confidence 3456678999999999999999999865 5889999999754322 235677999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc-----CCCcEEEeeccC
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN-----DYFEAKVSDFGL 807 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~-----~~~~vkl~Dfg~ 807 (885)
++||||+++ +|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++ ..+.+||+|||.
T Consensus 109 ~lv~e~~~~-~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 109 HLIFEYAEN-DLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EEEEECCSE-EHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EEEEecCCC-CHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 999999974 9999998654 4899999999999999999999 89999999999999994 455699999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+....... .......+|..|+|||++.+. .++.++||||+||++|+|++|+.||...
T Consensus 184 a~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 241 (329)
T 3gbz_A 184 ARAFGIPI-RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGD 241 (329)
T ss_dssp HHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccCCcc-cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCC
Confidence 98765322 222345679999999998875 4899999999999999999999999653
No 145
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.97 E-value=2.2e-31 Score=288.99 Aligned_cols=200 Identities=26% Similarity=0.328 Sum_probs=177.3
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc------cHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ------CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~------~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
..+|++.+.||+|+||.||+|++. +++.||+|++...... ..+.+.+|++++++++||||+++++++.++...
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 456999999999999999999876 5889999998754321 356799999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC----cEEEeeccCc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF----EAKVSDFGLA 808 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~----~vkl~Dfg~a 808 (885)
++||||+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++ .++|+|||.+
T Consensus 91 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 9999999999999999854 45899999999999999999999 89999999999999999887 7999999999
Q ss_pred ccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 809 RLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
....... ......+++.|+|||++.+..++.++||||+|+++|+|++|+.||...
T Consensus 167 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 221 (321)
T 2a2a_A 167 HEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221 (321)
T ss_dssp EECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred eecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCC
Confidence 8765422 223456899999999999999999999999999999999999999653
No 146
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.97 E-value=2.5e-32 Score=303.14 Aligned_cols=202 Identities=28% Similarity=0.427 Sum_probs=175.0
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
..+|++.+.||+|+||.||+|++. +++.||+|+++.... .....+.+|++++++++||||+++++++..++..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 356899999999999999999986 688999999875432 223468899999999999999999999998889999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|+++++|.+++......+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++.........
T Consensus 193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 99999999999876666899999999999999999999 899999999999999999999999999999765432111
Q ss_pred cc-cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 818 VS-TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 818 ~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.. ....++..|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~ 318 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPN 318 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 11 12234678999999998899999999999999999998 9999864
No 147
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.97 E-value=1.6e-31 Score=298.33 Aligned_cols=199 Identities=23% Similarity=0.268 Sum_probs=163.5
Q ss_pred eeeEEeec-ceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhc-ccCCCCccceeeeeEe----CCe
Q 047790 659 VIAIIVFE-NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLD-MVKHQNLVQLLGYCSV----GEE 731 (885)
Q Consensus 659 ~~~~~~~~-~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~-~l~~~~i~~~~~~~~~----~~~ 731 (885)
++.+|.+. ++||+|+||.||+|.+. +++.||+|++.. ...+.+|++++. ..+||||+++++++.. +..
T Consensus 59 ~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~ 133 (400)
T 1nxk_A 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 133 (400)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcE
Confidence 34456665 78999999999999875 588899999853 245678888874 4579999999998865 567
Q ss_pred eEEEEecccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC---CCcEEEeeccC
Q 047790 732 KLLVYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND---YFEAKVSDFGL 807 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~---~~~vkl~Dfg~ 807 (885)
.|+||||+++|+|.+++..+. ..+++..+..++.|++.|++||| +.||+||||||+||+++. ++.+||+|||+
T Consensus 134 ~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~ 210 (400)
T 1nxk_A 134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGF 210 (400)
T ss_dssp EEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEeccc
Confidence 899999999999999998643 35899999999999999999999 899999999999999987 78899999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
+....... ......+|+.|+|||++.+..++.++||||+||++|+|++|+.||.....
T Consensus 211 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 268 (400)
T 1nxk_A 211 AKETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 268 (400)
T ss_dssp CEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTT
T ss_pred ccccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcc
Confidence 98755322 22345689999999999999999999999999999999999999976543
No 148
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.97 E-value=7.7e-32 Score=286.82 Aligned_cols=202 Identities=24% Similarity=0.357 Sum_probs=171.5
Q ss_pred eeeEEeecceecccCCceEEEEEeCC----CCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD----QKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~----~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
...+|++.+.||+|+||.||+|.+.+ +..||+|++.... ....+++.+|+++++.++||||+++++++.+ +..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 34579999999999999999998543 3359999987653 2345678999999999999999999999864 4568
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+.....
T Consensus 89 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 999999999999999877667999999999999999999999 89999999999999999999999999999987655
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
..........++..|+|||++.+..++.++||||+|+++|+|++ |+.||..
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~ 217 (281)
T 3cc6_A 166 EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFW 217 (281)
T ss_dssp -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred ccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCccc
Confidence 33333344557789999999998999999999999999999998 9999964
No 149
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.97 E-value=1.8e-31 Score=291.38 Aligned_cols=199 Identities=24% Similarity=0.352 Sum_probs=168.7
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCC--------
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE-------- 730 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~-------- 730 (885)
.+|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+..
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 56999999999999999999876 68999999997543 234567899999999999999999999885533
Q ss_pred -------------------------------------------------eeEEEEecccCCCHHHHHhhcCC--CCCHHH
Q 047790 731 -------------------------------------------------EKLLVYEYMVNGSLDDWLRNRAA--SLDWGK 759 (885)
Q Consensus 731 -------------------------------------------------~~~lv~e~~~~~sL~~~l~~~~~--~~~~~~ 759 (885)
..++||||+++++|.+++..... ..++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 165 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV 165 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence 37999999999999999986432 255667
Q ss_pred HHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC-----------CcccCCCCCCcc
Q 047790 760 RCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES-----------HVSTDTADTIGY 828 (885)
Q Consensus 760 ~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~-----------~~~~~~~~~~~y 828 (885)
+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+........ .......+|+.|
T Consensus 166 ~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 242 (332)
T 3qd2_B 166 CLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242 (332)
T ss_dssp HHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred HHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence 8999999999999999 89999999999999999999999999999987754321 122335689999
Q ss_pred CCcccccCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 047790 829 VPSEYGQAGRANERGDIYSFGVILLELVTGKQPT 862 (885)
Q Consensus 829 ~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~ 862 (885)
+|||++.+..++.++||||+||++|||++|..|+
T Consensus 243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~ 276 (332)
T 3qd2_B 243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQ 276 (332)
T ss_dssp SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCH
T ss_pred cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCCh
Confidence 9999999999999999999999999999998775
No 150
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.97 E-value=1.4e-31 Score=297.75 Aligned_cols=202 Identities=29% Similarity=0.457 Sum_probs=175.3
Q ss_pred eeEEeecceecccCCceEEEEEeC--------CCCeEEEEEeccccc-ccHHHHHHHHHHhccc-CCCCccceeeeeEeC
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP--------DQKTVAVKKLSQATG-QCDREFAAEMETLDMV-KHQNLVQLLGYCSVG 729 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~--------~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~ 729 (885)
..+|++.++||+|+||.||+|++. ++..||+|++..... ....++.+|+++++++ +||||+++++++..+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 356999999999999999999853 235799999876532 2346788999999999 899999999999999
Q ss_pred CeeEEEEecccCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE
Q 047790 730 EEKLLVYEYMVNGSLDDWLRNRA---------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL 794 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~~~---------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~ 794 (885)
+..++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEE
Confidence 99999999999999999998643 34899999999999999999999 8999999999999999
Q ss_pred cCCCcEEEeeccCcccccCCCC-CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 795 NDYFEAKVSDFGLARLISDCES-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 795 ~~~~~vkl~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
+.++.+||+|||.+........ .......++..|+|||++.+..++.++||||+||++|+|++ |..||..
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~ 296 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 296 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999987654322 22333456788999999999999999999999999999999 9999864
No 151
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.97 E-value=1e-31 Score=291.09 Aligned_cols=202 Identities=25% Similarity=0.341 Sum_probs=169.7
Q ss_pred eEEee-cceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEEEe
Q 047790 661 AIIVF-ENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 661 ~~~~~-~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
.+|++ ++.||+|+||.||+|.+. +++.||+|++..........+.+|+++++++ +||||+++++++.+++..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 45887 478999999999999865 5889999999776555667899999999885 69999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc---EEEeeccCcccccCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE---AKVSDFGLARLISDC 814 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~---vkl~Dfg~a~~~~~~ 814 (885)
|+++++|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++. +||+|||.+......
T Consensus 92 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 92 KMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred cCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 999999999998654 4899999999999999999999 899999999999999987765 999999998765421
Q ss_pred CC------CcccCCCCCCccCCcccccC-----CCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 815 ES------HVSTDTADTIGYVPSEYGQA-----GRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 815 ~~------~~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
.. .......+++.|+|||++.+ ..++.++||||+||++|+|++|+.||....
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 230 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRC 230 (316)
T ss_dssp --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccc
Confidence 11 11223458999999999875 457899999999999999999999998654
No 152
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.97 E-value=1.7e-32 Score=298.13 Aligned_cols=200 Identities=24% Similarity=0.372 Sum_probs=167.1
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc-cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ-CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
.+|++.++||+|+||.||+|++. +++.||+|++...... ....+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46999999999999999999876 6889999998654322 122455799999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++ +++.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+....... ..
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-~~ 156 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-KT 156 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCc-cc
Confidence 96 5999999877777999999999999999999999 8999999999999999999999999999987654322 22
Q ss_pred ccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....++..|+|||++.+ ..++.++||||+||++|+|++|+.||...
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 204 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGS 204 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 234567999999999877 56899999999999999999999999754
No 153
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.97 E-value=2.5e-31 Score=283.82 Aligned_cols=199 Identities=29% Similarity=0.480 Sum_probs=171.0
Q ss_pred eeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccccc-------HHHHHHHHHHhcccCCCCccceeeeeEeC
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQC-------DREFAAEMETLDMVKHQNLVQLLGYCSVG 729 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~-------~~~~~~E~~~l~~l~~~~i~~~~~~~~~~ 729 (885)
+...+|++.+.||+|+||.||+|++. +++.||+|++....... .+.+.+|++++++++||||+++++++.+.
T Consensus 16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 95 (287)
T 4f0f_A 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP 95 (287)
T ss_dssp CCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT
T ss_pred hhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC
Confidence 34467999999999999999999874 68899999986543221 16788999999999999999999998655
Q ss_pred CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCC--ceecCCCCCcEEEcCCCc-----EEE
Q 047790 730 EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPY--IIHMDIKTSNILLNDYFE-----AKV 802 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~--i~H~dlkp~Nil~~~~~~-----vkl 802 (885)
. ++||||+++++|.+.+......+++..+..++.|++.|++||| +.+ |+||||||+||+++.++. +||
T Consensus 96 ~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 96 P--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp T--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred C--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEe
Confidence 4 6999999999999998877777999999999999999999999 889 999999999999987776 999
Q ss_pred eeccCcccccCCCCCcccCCCCCCccCCccccc--CCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 803 SDFGLARLISDCESHVSTDTADTIGYVPSEYGQ--AGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 803 ~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+|||.+..... ......+++.|+|||++. ...++.++||||+||++|+|++|+.||...
T Consensus 171 ~Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 231 (287)
T 4f0f_A 171 ADFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY 231 (287)
T ss_dssp CCCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred CCCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccc
Confidence 99999875432 233457899999999984 455788999999999999999999999753
No 154
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.3e-35 Score=339.93 Aligned_cols=359 Identities=21% Similarity=0.226 Sum_probs=220.4
Q ss_pred CCCCEEecCCCcccCcCCcC-ccCcCCCCEEeccCCcCCC----CCCccccccccccEeeeeccCCCCCCCcccc-CCc-
Q 047790 88 SSLRILDLSKNLLFGQLSPQ-VSNLKRLKMLSVGENQLSG----SIPSQLGLLTRLETISLRSNSFTGEMPSELG-DIK- 160 (885)
Q Consensus 88 ~~L~~L~Ls~n~l~~~~~~~-~~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~-~l~- 160 (885)
++|++|||++|.++...... +..+++|++|+|++|++++ .++..+..+++|++|+|++|.++...+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 45677788777776543333 6677788888888888764 3456667778888888888887654443332 344
Q ss_pred ---cCceEEccCCcCCc----cCCcccCCCCCCccccccccccCCCCCcc----cccccccccEEEeecccCcccCCccc
Q 047790 161 ---QLKSLDFSGNGLNG----TIPSRLGDLTQLQDLDLSDNLLSGSLPVS----LLKNLQSLSYLDVSNNLLSGNIPPEI 229 (885)
Q Consensus 161 ---~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~~l~~L~~L~Ls~N~l~~~~p~~~ 229 (885)
+|++|+|++|+++. .+|..+..+++|++|+|++|.+++..+.. .....++|++|++++|++++..+
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~--- 159 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASC--- 159 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGH---
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHH---
Confidence 58888888888773 45777778888888888888876322222 12234568888888887764221
Q ss_pred cCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccC-----CCCCcEEEccCCCCcCc---
Q 047790 230 GNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCN-----SGSLVEINLDGNMLSGT--- 301 (885)
Q Consensus 230 ~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~-----l~~L~~L~L~~N~l~~~--- 301 (885)
..++..+..+++|++|++++|.+++..+..+.. .++|++|++++|.+++.
T Consensus 160 ----------------------~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~ 217 (461)
T 1z7x_W 160 ----------------------EPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCR 217 (461)
T ss_dssp ----------------------HHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHH
T ss_pred ----------------------HHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHH
Confidence 112333445566666666666666544443332 44667777777766653
Q ss_pred -ccccccccCCcceeeccccccCCCC-----CcccCCC-CceeEEeecCccccc----cCccccCccccceeeccccccc
Q 047790 302 -IEDVFDRCTNLSELVLVNNRISGSI-----PEYISEL-PLKVFDLQYNNFTGV----IPVSLWNSENLMEFNAASNLLE 370 (885)
Q Consensus 302 -~~~~~~~l~~L~~L~Ls~N~l~~~~-----p~~~~~~-~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 370 (885)
++..+..+++|++|++++|++++.. +..+... .|++|++++|+++.. ++..+..+++|++|++++|.+.
T Consensus 218 ~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~ 297 (461)
T 1z7x_W 218 DLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELG 297 (461)
T ss_dssp HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCH
T ss_pred HHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCc
Confidence 3455566677777777777665422 1111122 566666666666654 3455555666777777777665
Q ss_pred CCCccccccc-----ccccEEEccCCccccc----CcccccccccccceecccccccCcCCCccCC-----CCcccEEEc
Q 047790 371 GSLSWEISNA-----VALEKLDLSSNMLTRQ----IPKKIGNLTNIQILKLNSNFFDGIIPMEFGD-----CISLNTLDL 436 (885)
Q Consensus 371 ~~~~~~~~~l-----~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~L 436 (885)
...+..+... ++|++|++++|.+++. ++..+..+++|+.|+|++|.+++..+..+.. .++|++|++
T Consensus 298 ~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L 377 (461)
T 1z7x_W 298 DEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWL 377 (461)
T ss_dssp HHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEEC
T ss_pred hHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEEC
Confidence 4443333332 5677777777777654 3455566677777777777776554433332 557777777
Q ss_pred CCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccC
Q 047790 437 GSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTG 483 (885)
Q Consensus 437 s~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 483 (885)
++|++++.. ...+|..+..+++|++|++++|++++
T Consensus 378 ~~n~i~~~~------------~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 378 ADCDVSDSS------------CSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp TTSCCCHHH------------HHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred CCCCCChhh------------HHHHHHHHHhCCCccEEECCCCCCCH
Confidence 777664110 01456666777777777777777764
No 155
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.97 E-value=1.2e-31 Score=304.79 Aligned_cols=200 Identities=28% Similarity=0.298 Sum_probs=167.2
Q ss_pred eeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeC----
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVG---- 729 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~---- 729 (885)
+.+..+|++.++||+|+||.||+|.+. +++.||+|++.... .....++.+|+++++.++||||+++++++...
T Consensus 58 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 137 (464)
T 3ttj_A 58 FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLE 137 (464)
T ss_dssp EEEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTT
T ss_pred eeecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccc
Confidence 345678999999999999999999865 48889999997542 23356788999999999999999999998654
Q ss_pred --CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccC
Q 047790 730 --EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGL 807 (885)
Q Consensus 730 --~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~ 807 (885)
...|+||||+++ ++.+.+.. .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||+
T Consensus 138 ~~~~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 138 EFQDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp TCCEEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred cCCeEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 357999999965 57666653 3899999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
|+..... .......+|+.|+|||++.+..++.++||||+||++|||++|+.||.+.
T Consensus 211 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~ 266 (464)
T 3ttj_A 211 ARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266 (464)
T ss_dssp C-----C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eeecCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9876542 2234457899999999999999999999999999999999999999654
No 156
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.97 E-value=1.2e-31 Score=292.45 Aligned_cols=218 Identities=23% Similarity=0.245 Sum_probs=182.4
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc--------cHHHHHHHHHHhcccCCCCccceeeeeEeCC
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ--------CDREFAAEMETLDMVKHQNLVQLLGYCSVGE 730 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~--------~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 730 (885)
..+|++.+.||+|+||.||+|++. +++.||+|++...... ....+.+|++++++++||||+++++++.+.+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 457999999999999999999864 5888999998754311 2235778999999999999999999999999
Q ss_pred eeEEEEecccCC-CHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcc
Q 047790 731 EKLLVYEYMVNG-SLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLAR 809 (885)
Q Consensus 731 ~~~lv~e~~~~~-sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~ 809 (885)
..++||||+.+| +|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+.
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 178 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAA 178 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccce
Confidence 999999999766 9999998543 4999999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCCCcccCCCCCCccCCcccccCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCC---------CCCCCCHHHHHH
Q 047790 810 LISDCESHVSTDTADTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQPTGPEFE---------DKDGGNLVDWVL 879 (885)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~P~~~~~~---------~~~~~~l~~~~~ 879 (885)
...... ......+|+.|+|||++.+..+ +.++||||+||++|+|++|+.||..... ......+.+.+.
T Consensus 179 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~l~~li~ 256 (335)
T 3dls_A 179 YLERGK--LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKELMSLVS 256 (335)
T ss_dssp ECCTTC--CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTTTCCCCSSCCCHHHHHHHH
T ss_pred ECCCCC--ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHhhccCCCcccCHHHHHHHH
Confidence 765432 2234568999999999998877 7899999999999999999999974221 112334566666
Q ss_pred HHHh
Q 047790 880 LMMK 883 (885)
Q Consensus 880 ~~~~ 883 (885)
.|+.
T Consensus 257 ~~L~ 260 (335)
T 3dls_A 257 GLLQ 260 (335)
T ss_dssp HHTC
T ss_pred HHcc
Confidence 6654
No 157
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.97 E-value=2.9e-31 Score=282.84 Aligned_cols=199 Identities=23% Similarity=0.273 Sum_probs=174.8
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
..+|++.+.||+|+||.||+|.+. +++.||+|++..... ...+.+.+|++++++++||||+++++++..++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 357999999999999999999875 488999999865432 23467889999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc---EEEeeccCcccccC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE---AKVSDFGLARLISD 813 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~---vkl~Dfg~a~~~~~ 813 (885)
||+++++|.+.+.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++. +||+|||.+.....
T Consensus 85 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 9999999999887654 4899999999999999999999 899999999999999986555 99999999987654
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.. ......+++.|+|||++.+..++.++||||+|+++|+|++|+.||..
T Consensus 161 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 209 (284)
T 3kk8_A 161 SE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 209 (284)
T ss_dssp SC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred Cc--cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCC
Confidence 32 22345789999999999999999999999999999999999999854
No 158
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.97 E-value=1.1e-31 Score=288.97 Aligned_cols=200 Identities=25% Similarity=0.397 Sum_probs=173.3
Q ss_pred eEEeecceecccCCceEEEEEe-----CCCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeC--Cee
Q 047790 661 AIIVFENVIGGGGFRTAFKGTM-----PDQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVG--EEK 732 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~-----~~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~--~~~ 732 (885)
..|++.+.||+|+||.||+|++ .+++.||+|++.... .....++.+|++++++++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4589999999999999999983 358899999997543 33457889999999999999999999999876 568
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
++||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+..+.
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999999999776667999999999999999999999 8999999999999999999999999999998775
Q ss_pred CCCC--CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 813 DCES--HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 813 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
.... .......++..|+|||++.+..++.++||||+|+++|+|++|..|+.
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 230 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDS 230 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCc
Confidence 5332 22334567888999999999999999999999999999999998864
No 159
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.97 E-value=7.5e-32 Score=306.72 Aligned_cols=199 Identities=29% Similarity=0.485 Sum_probs=174.8
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
..|++.++||+|+||.||+|.+.++..||+|+++... ...+.+.+|++++++++||||+++++++. ++..++||||++
T Consensus 188 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~ 265 (454)
T 1qcf_A 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMA 265 (454)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCT
T ss_pred HHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecC
Confidence 4689999999999999999999888999999997644 34678999999999999999999999986 567899999999
Q ss_pred CCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 741 NGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 741 ~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
+|+|.+++... ...+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||+|||+++..........
T Consensus 266 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 342 (454)
T 1qcf_A 266 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 342 (454)
T ss_dssp TCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTT
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceecc
Confidence 99999999753 234888999999999999999999 89999999999999999999999999999987654222222
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
....++..|+|||++....++.++|||||||++|||++ |+.||..
T Consensus 343 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~ 388 (454)
T 1qcf_A 343 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG 388 (454)
T ss_dssp CSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCC
Confidence 33446778999999999999999999999999999999 9999964
No 160
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.97 E-value=2.5e-31 Score=296.01 Aligned_cols=199 Identities=23% Similarity=0.358 Sum_probs=168.7
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEecccc--cccHHHHHHHHHHhcccC--CCCccceeeeeEeCCeeEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQAT--GQCDREFAAEMETLDMVK--HQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~--~~~i~~~~~~~~~~~~~~lv 735 (885)
..+|++.+.||+|+||.||+|...+++.||+|++.... ......+.+|++++++++ ||||+++++++..++..|+|
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 45799999999999999999998889999999986543 223467899999999997 59999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|| +.+++|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||+++ ++.+||+|||++..+....
T Consensus 135 ~E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp EE-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred Ee-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 99 55889999998654 5899999999999999999999 99999999999999996 4789999999998765432
Q ss_pred CC-cccCCCCCCccCCcccccC-----------CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 816 SH-VSTDTADTIGYVPSEYGQA-----------GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 816 ~~-~~~~~~~~~~y~aPE~~~~-----------~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.. ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 269 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 269 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchh
Confidence 22 2344579999999999865 3688899999999999999999999975
No 161
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.97 E-value=5.4e-32 Score=302.50 Aligned_cols=205 Identities=23% Similarity=0.301 Sum_probs=176.2
Q ss_pred eeeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCC--eeE
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE--EKL 733 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~--~~~ 733 (885)
....+|++.++||+|+||.||+|++.. ++.||+|++.... ....+.+.+|++++++++||||+++++++.... ..+
T Consensus 6 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 85 (396)
T 4eut_A 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (396)
T ss_dssp CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeE
Confidence 346789999999999999999998765 8999999997543 234567889999999999999999999988654 679
Q ss_pred EEEecccCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE----cCCCcEEEeeccC
Q 047790 734 LVYEYMVNGSLDDWLRNRA--ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL----NDYFEAKVSDFGL 807 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~----~~~~~vkl~Dfg~ 807 (885)
+||||+++++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||++ +..+.+||+|||.
T Consensus 86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 9999999999999998532 33899999999999999999999 8999999999999999 7777899999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccC--------CCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQA--------GRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
++...... ......++..|+|||++.+ ..++.++||||+||++|||++|+.||.+...
T Consensus 163 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~ 228 (396)
T 4eut_A 163 ARELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG 228 (396)
T ss_dssp CEECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTC
T ss_pred ceEccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCc
Confidence 98765432 2234568999999998765 4667899999999999999999999976544
No 162
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.97 E-value=3.1e-31 Score=282.60 Aligned_cols=200 Identities=22% Similarity=0.361 Sum_probs=176.9
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
...+|++.+.||+|+||.||+|.+. +++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++
T Consensus 12 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 91 (284)
T 2vgo_A 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYL 91 (284)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEE
Confidence 4467999999999999999999876 47789999986532 2235678999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+......
T Consensus 92 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 92 MLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp EECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred EEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence 999999999999998654 4899999999999999999999 999999999999999999999999999998765432
Q ss_pred CCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......++..|+|||++.+..++.++||||+|+++|+|++|+.||...
T Consensus 168 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 215 (284)
T 2vgo_A 168 ---RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSP 215 (284)
T ss_dssp ---CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred ---ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCC
Confidence 223456899999999999999999999999999999999999999753
No 163
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.97 E-value=2.1e-31 Score=286.86 Aligned_cols=199 Identities=24% Similarity=0.368 Sum_probs=173.1
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
+..+|++.+.||+|+||.||+|++. +++.||+|++..........+.+|++++++++||||+++++++.+....++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 3457999999999999999999875 689999999986554445678899999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE---cCCCcEEEeeccCcccccCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL---NDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~---~~~~~vkl~Dfg~a~~~~~~ 814 (885)
|+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||++ ++++.++|+|||.+......
T Consensus 87 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 162 (304)
T 2jam_A 87 LVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG 162 (304)
T ss_dssp CCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB
T ss_pred cCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC
Confidence 999999999987554 4899999999999999999999 8999999999999999 77889999999998764331
Q ss_pred CCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
......+++.|+|||++.+..++.++||||+|+++|+|++|+.||..
T Consensus 163 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 209 (304)
T 2jam_A 163 ---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE 209 (304)
T ss_dssp ---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 12234589999999999999999999999999999999999999864
No 164
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.97 E-value=1.2e-31 Score=284.99 Aligned_cols=200 Identities=33% Similarity=0.513 Sum_probs=175.4
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..+|++.+.||+|+||.||+|...+++.||+|++.... ...+.+.+|++++++++||||+++++++. ++..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence 35699999999999999999998888899999987643 34678999999999999999999999986 45689999999
Q ss_pred cCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 740 VNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 740 ~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||++++++.+||+|||.+..........
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 166 (279)
T 1qpc_A 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 166 (279)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEEC
T ss_pred CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccccc
Confidence 9999999997532 24899999999999999999999 8999999999999999999999999999998776533333
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.....++..|+|||++.+..++.++||||+|+++|||++ |+.||..
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 213 (279)
T 1qpc_A 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213 (279)
T ss_dssp CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcc
Confidence 334456788999999998889999999999999999999 9999864
No 165
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.97 E-value=6.1e-32 Score=298.64 Aligned_cols=203 Identities=28% Similarity=0.391 Sum_probs=173.4
Q ss_pred eeeEEeecceecccCCceEEEEEeC------CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCe
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEE 731 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~------~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 731 (885)
...+|++.++||+|+||.||+|++. +++.||+|++.... .....++.+|+.++++++||||+++++++.....
T Consensus 69 ~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 148 (367)
T 3l9p_A 69 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 148 (367)
T ss_dssp CGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred CHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 3467999999999999999999843 46689999997543 2334578899999999999999999999999899
Q ss_pred eEEEEecccCCCHHHHHhhcC------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC---cEEE
Q 047790 732 KLLVYEYMVNGSLDDWLRNRA------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF---EAKV 802 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~---~vkl 802 (885)
.++||||+++++|.+++.... ..+++..+..++.|++.|++||| ++||+||||||+||+++.++ .+||
T Consensus 149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEE
Confidence 999999999999999998643 34899999999999999999999 89999999999999998554 5999
Q ss_pred eeccCcccccCCC-CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 803 SDFGLARLISDCE-SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 803 ~Dfg~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
+|||.++.+.... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~ 289 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 289 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999997653221 122233457889999999999999999999999999999998 9999864
No 166
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.97 E-value=2.5e-31 Score=282.14 Aligned_cols=204 Identities=25% Similarity=0.408 Sum_probs=170.8
Q ss_pred ceeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCe
Q 047790 656 SVLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEE 731 (885)
Q Consensus 656 ~~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 731 (885)
+.+..++|++.+.||+|+||.||+|.+. +++.||+|++.... ......+.+|+++++.++||||+++++++...+.
T Consensus 6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 85 (276)
T 2h6d_A 6 GRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTD 85 (276)
T ss_dssp -CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred CcceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCe
Confidence 3456678999999999999999999876 68999999986542 2335678899999999999999999999999999
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
.++||||+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+...
T Consensus 86 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~ 161 (276)
T 2h6d_A 86 FFMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM 161 (276)
T ss_dssp EEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred EEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeeccccccc
Confidence 999999999999999998654 4899999999999999999999 899999999999999999999999999998876
Q ss_pred cCCCCCcccCCCCCCccCCcccccCCCC-CCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.... ......+++.|+|||++.+..+ +.++||||+|+++|+|++|+.||...
T Consensus 162 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 214 (276)
T 2h6d_A 162 SDGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE 214 (276)
T ss_dssp CC---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCCc--ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Confidence 5422 2234468899999999988765 68999999999999999999999653
No 167
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.97 E-value=2.4e-31 Score=293.82 Aligned_cols=199 Identities=24% Similarity=0.298 Sum_probs=174.2
Q ss_pred eeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccC-----CCCccceeeeeEeCCe
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVK-----HQNLVQLLGYCSVGEE 731 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-----~~~i~~~~~~~~~~~~ 731 (885)
++..+|++.++||+|+||.||+|++. +++.||+|++.... ........|+++++.++ ||||+++++++...+.
T Consensus 32 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~ 110 (360)
T 3llt_A 32 LLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDH 110 (360)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTE
T ss_pred EecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCe
Confidence 34567999999999999999999874 58889999986432 23456778999999886 9999999999999999
Q ss_pred eEEEEecccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC--------------
Q 047790 732 KLLVYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND-------------- 796 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~-------------- 796 (885)
.++||||+ +++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++.
T Consensus 111 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~ 186 (360)
T 3llt_A 111 MCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRRVT 186 (360)
T ss_dssp EEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCEEEEEEECTT
T ss_pred eEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEccccccccccchhccc
Confidence 99999999 899999998643 35899999999999999999999 899999999999999975
Q ss_pred -----------CCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 797 -----------YFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 797 -----------~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.+.+||+|||.+..... ......+|+.|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 187 ~~~~~~~~~~~~~~~kl~DFG~a~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 187 DGKKIQIYRTKSTGIKLIDFGCATFKSD----YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp TCCEEEEEEESCCCEEECCCTTCEETTS----CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccCCCCEEEEeccCceecCC----CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence 78899999999986443 223457899999999999999999999999999999999999999754
No 168
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.97 E-value=1e-31 Score=292.10 Aligned_cols=205 Identities=21% Similarity=0.357 Sum_probs=159.9
Q ss_pred eeeeEEeecceecccCCceEEEEEeCCCC----eEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCe
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMPDQK----TVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEE 731 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~~~~----~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 731 (885)
+...+|++.+.||+|+||.||+|++.... .||+|++.... ....+++.+|++++++++||||+++++++.....
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 34567999999999999999999876533 79999987542 3345678999999999999999999999987655
Q ss_pred e------EEEEecccCCCHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcE
Q 047790 732 K------LLVYEYMVNGSLDDWLRNRA-----ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEA 800 (885)
Q Consensus 732 ~------~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~v 800 (885)
. ++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCE
Confidence 4 89999999999999986422 24899999999999999999999 8999999999999999999999
Q ss_pred EEeeccCcccccCCCC-CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 801 KVSDFGLARLISDCES-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 801 kl~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
||+|||.+........ .......+++.|+|||++.+..++.++||||+||++|+|++ |+.||...
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~ 243 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI 243 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCcccc
Confidence 9999999987654322 22233456778999999999999999999999999999999 99999753
No 169
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.97 E-value=8e-32 Score=295.63 Aligned_cols=202 Identities=30% Similarity=0.524 Sum_probs=174.7
Q ss_pred eeEEeecceecccCCceEEEEEeCC------CCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD------QKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~------~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
..+|++.+.||+|+||.||+|++.+ ++.||+|+++.... .....+.+|++++++++||||+++++++.+++..
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 125 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM 125 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCce
Confidence 3568999999999999999998743 47899999976432 2346789999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcC-----------------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCC
Q 047790 733 LLVYEYMVNGSLDDWLRNRA-----------------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKT 789 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~-----------------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp 789 (885)
++||||+++++|.+++.... ..+++..+..++.|+++|++||| +.||+||||||
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp 202 (343)
T 1luf_A 126 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLAT 202 (343)
T ss_dssp EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCc
Confidence 99999999999999998632 45899999999999999999999 89999999999
Q ss_pred CcEEEcCCCcEEEeeccCcccccCCCC-CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 790 SNILLNDYFEAKVSDFGLARLISDCES-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 790 ~Nil~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
+||+++.++.+||+|||.+........ .......++..|+|||++.+..++.++||||+|+++|||++ |..||..
T Consensus 203 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 279 (343)
T 1luf_A 203 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279 (343)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred ceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence 999999999999999999977643221 22234467889999999999999999999999999999999 9999864
No 170
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.97 E-value=8.1e-32 Score=293.35 Aligned_cols=207 Identities=25% Similarity=0.356 Sum_probs=180.2
Q ss_pred eceeeeeEEeecceecccCCceEEEEEe-----CCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeE--
Q 047790 655 GSVLVIAIIVFENVIGGGGFRTAFKGTM-----PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCS-- 727 (885)
Q Consensus 655 g~~~~~~~~~~~~~lG~G~~g~vy~a~~-----~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-- 727 (885)
+..+...+|++.+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++.
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 96 (327)
T 3lxl_A 17 PTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGP 96 (327)
T ss_dssp CCBCCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred hhhhchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC
Confidence 3455567899999999999999999983 358889999998765555677999999999999999999999886
Q ss_pred eCCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccC
Q 047790 728 VGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGL 807 (885)
Q Consensus 728 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~ 807 (885)
.....++||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.
T Consensus 97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 97 GRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp SSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred CCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEccccc
Confidence 456789999999999999999875556999999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCCCC--cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 808 ARLISDCESH--VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 808 a~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
+......... ......++..|+|||++.+..++.++||||+|+++|+|++|+.||..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~ 232 (327)
T 3lxl_A 174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCS 232 (327)
T ss_dssp CEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred ceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence 9876543322 22344578889999999999999999999999999999999999753
No 171
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.97 E-value=9.7e-32 Score=287.18 Aligned_cols=202 Identities=29% Similarity=0.445 Sum_probs=178.5
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
...+|++.+.||+|+||.||+|.+.+ ++.||+|++.... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 34569999999999999999998765 7889999987543 335678899999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 738 YMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 738 ~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
|+++++|.+++... ...+++..+..++.|++.+++||| +.||+||||||+||+++.++.++|+|||.+........
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 166 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 166 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCcc
Confidence 99999999999863 345899999999999999999999 89999999999999999999999999999987765443
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.......++..|+|||++.+..++.++||||+|+++|+|++ |..||..
T Consensus 167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~ 215 (288)
T 3kfa_A 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215 (288)
T ss_dssp EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 33444556788999999999999999999999999999999 9999865
No 172
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=1.3e-31 Score=294.02 Aligned_cols=202 Identities=23% Similarity=0.316 Sum_probs=169.4
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc-----cHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ-----CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~-----~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
...+|++.+.||+|+||.||+|.+. +++.||+|++...... ....+.+|+++++.++||||+++++++.+.+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 3467999999999999999999876 4889999998753321 124678999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
++||||+++ ++.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+..+.
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFG 163 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred EEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence 999999976 899998876667899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCCCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 813 DCESHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 813 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
... .......+|+.|+|||++.+. .++.++||||+||++|+|++|..||...
T Consensus 164 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~ 216 (346)
T 1ua2_A 164 SPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGD 216 (346)
T ss_dssp SCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence 432 223345789999999998764 5789999999999999999999998653
No 173
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.97 E-value=1.3e-31 Score=283.47 Aligned_cols=196 Identities=31% Similarity=0.457 Sum_probs=162.0
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEeccccc----ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATG----QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
..+|++.+.||+|+||.||+|.+. ++.||+|++..... ...+.+.+|+++++.++||||+++++++..++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 457999999999999999999875 78899999875432 2346788999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCC---ceecCCCCCcEEEcC--------CCcEEEee
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPY---IIHMDIKTSNILLND--------YFEAKVSD 804 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~---i~H~dlkp~Nil~~~--------~~~vkl~D 804 (885)
|||+++++|.+++.. ..+++..+..++.|++.|++||| +.| |+||||||+||+++. ++.++++|
T Consensus 85 ~e~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 999999999999864 35899999999999999999999 777 999999999999985 67899999
Q ss_pred ccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 805 FGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 805 fg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
||.+..+.... .....+++.|+|||++.+..++.++||||+|+++|+|++|+.||..
T Consensus 160 fg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 216 (271)
T 3dtc_A 160 FGLAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216 (271)
T ss_dssp CCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTT
T ss_pred CCccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 99998765422 2234689999999999999999999999999999999999999975
No 174
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.97 E-value=6.9e-32 Score=288.47 Aligned_cols=195 Identities=27% Similarity=0.421 Sum_probs=171.2
Q ss_pred eeEEeecceecccCCceEEEEEeCC-C-------CeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-Q-------KTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEE 731 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-~-------~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 731 (885)
..+|++.+.||+|+||.||+|.+.. + ..||+|++........+.+.+|++++++++||||+++++++..++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 4579999999999999999998654 3 4699999977666667889999999999999999999999999999
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc--------EEEe
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE--------AKVS 803 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~--------vkl~ 803 (885)
.++||||+++++|.+++......+++..+..++.|++.|++||| ++||+||||||+||+++.++. +|++
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeec
Confidence 99999999999999999876656999999999999999999999 899999999999999988776 9999
Q ss_pred eccCcccccCCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCC
Q 047790 804 DFGLARLISDCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPT 862 (885)
Q Consensus 804 Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~ 862 (885)
|||.+...... ....++..|+|||++.+ ..++.++||||+|+++|||++|..|+
T Consensus 164 Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~ 218 (289)
T 4fvq_A 164 DPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP 218 (289)
T ss_dssp CCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred cCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCC
Confidence 99998664321 22346788999999988 67899999999999999999965544
No 175
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.97 E-value=5.1e-31 Score=285.37 Aligned_cols=199 Identities=26% Similarity=0.366 Sum_probs=173.5
Q ss_pred eeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..+|++.+.||+|+||.||+|.+.. ++.||+|++.... ....+.+|++++++++||||+++++++..+...++||||
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 105 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence 4569999999999999999998764 8899999987543 346788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+++++|.+++......+++..+..++.|++.|++||| +.|++||||||+||+++.++.++|+|||.+..+.... ..
T Consensus 106 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-~~ 181 (314)
T 3com_A 106 CGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM-AK 181 (314)
T ss_dssp CTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB-SC
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc-cc
Confidence 9999999999866667999999999999999999999 8999999999999999999999999999998765422 22
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.....++..|+|||++.+..++.++||||+|+++|+|++|+.||..
T Consensus 182 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 227 (314)
T 3com_A 182 RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYAD 227 (314)
T ss_dssp BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 3345689999999999999999999999999999999999999964
No 176
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.97 E-value=4.1e-31 Score=283.48 Aligned_cols=205 Identities=22% Similarity=0.298 Sum_probs=171.3
Q ss_pred eeeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeee-EeCCeeEEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYC-SVGEEKLLVY 736 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~-~~~~~~~lv~ 736 (885)
+..+|++.+.||+|+||.||+|++ .+++.||+|++..... ...+.+|+++++.++|++++..+.++ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 457899999999999999999986 5688999998654332 23578899999999988777666654 6778889999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE---cCCCcEEEeeccCcccccC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL---NDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~---~~~~~vkl~Dfg~a~~~~~ 813 (885)
||+ +++|.+++......+++..+..++.|++.|++||| +.||+||||||+||++ +.++.+||+|||.+.....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 999 99999999866667999999999999999999999 8999999999999999 7888999999999987654
Q ss_pred CCCC------cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCC
Q 047790 814 CESH------VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDK 869 (885)
Q Consensus 814 ~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~~~ 869 (885)
.... ......++..|+|||++.+..++.++||||+||++|+|++|+.||.......
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 222 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT 222 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhh
Confidence 3221 2234568999999999999999999999999999999999999998654443
No 177
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.97 E-value=4e-31 Score=285.51 Aligned_cols=196 Identities=22% Similarity=0.239 Sum_probs=166.2
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc--cHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ--CDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~--~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
.+|++.++||+|+||.||+|++. +++.||+|++...... .......|+..+.++ +||||+++++++.+++..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 56999999999999999999876 6899999998654322 233455566555555 8999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
||+ +++|.+++......+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||.+......
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~-- 210 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA-- 210 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccC--
Confidence 999 77999998877777999999999999999999999 899999999999999999999999999998876542
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
.......+|+.|+|||++.+ .++.++||||+||++|||++|..|+.
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~ 256 (311)
T 3p1a_A 211 GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPH 256 (311)
T ss_dssp ----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCS
T ss_pred CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 22334568999999999886 78999999999999999999976654
No 178
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.97 E-value=1.4e-31 Score=298.70 Aligned_cols=201 Identities=28% Similarity=0.377 Sum_probs=162.3
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccC-CCCccceeeeeEeCC--ee
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVK-HQNLVQLLGYCSVGE--EK 732 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~--~~ 732 (885)
+..+|++.+.||+|+||.||+|.+. +++.||+|++.... .....++.+|+.+++.+. ||||+++++++..++ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 3467999999999999999999864 58899999986542 233467889999999998 999999999997544 68
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
|+||||++ ++|.+++... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||+|+.+.
T Consensus 87 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFV 160 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred EEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence 99999996 5999998753 4899999999999999999999 8999999999999999999999999999998654
Q ss_pred CCC--------------------CCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 813 DCE--------------------SHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 813 ~~~--------------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
... ........+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 311 111233568999999999887 67899999999999999999999999754
No 179
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.97 E-value=1.1e-31 Score=296.56 Aligned_cols=201 Identities=25% Similarity=0.335 Sum_probs=175.9
Q ss_pred eeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
+...+|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++..++..++|
T Consensus 30 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 109 (360)
T 3eqc_A 30 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 109 (360)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence 34567999999999999999999876 58899999987543 23346789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCC-CceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP-YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~-~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
|||+++++|.+++.... .+++..+..++.|++.+++||| +. ||+||||||+||+++.++.++|+|||.+..+...
T Consensus 110 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 185 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 185 (360)
T ss_dssp ECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred EECCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence 99999999999998654 4899999999999999999999 75 9999999999999999999999999998765431
Q ss_pred CCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......+++.|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 186 ---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 186 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp ---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred ---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 223346899999999999999999999999999999999999999653
No 180
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.97 E-value=3.8e-31 Score=281.76 Aligned_cols=200 Identities=25% Similarity=0.328 Sum_probs=174.0
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc------ccHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG------QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~------~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
..+|++.+.||+|+||.||+|++. +++.||+|++..... ...+.+.+|++++++++||||+++++++..+...
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 356999999999999999999876 589999999865431 1357899999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC----cEEEeeccCc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF----EAKVSDFGLA 808 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~----~vkl~Dfg~a 808 (885)
++||||+++++|.+++.... .+++..+..++.|++.|++||| +.|++||||||+||+++.++ .++|+|||.+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 99999999999999997543 4899999999999999999999 89999999999999998776 7999999999
Q ss_pred ccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 809 RLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
....... ......+++.|+|||++.+..++.++||||+|+++|+|++|+.||...
T Consensus 160 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 214 (283)
T 3bhy_A 160 HKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGE 214 (283)
T ss_dssp EECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred eeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCc
Confidence 8765422 223346899999999999999999999999999999999999999754
No 181
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.97 E-value=1.3e-31 Score=294.60 Aligned_cols=206 Identities=23% Similarity=0.299 Sum_probs=179.1
Q ss_pred eeceeeeeEEeecceecccCCceEEEEEeCCCCeEEEEEeccccccc-----------------HHHHHHHHHHhcccCC
Q 047790 654 VGSVLVIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQC-----------------DREFAAEMETLDMVKH 716 (885)
Q Consensus 654 ~g~~~~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~-----------------~~~~~~E~~~l~~l~~ 716 (885)
.......++|++.+.||+|+||.||+|.+ +++.||+|++....... ...+.+|++++++++|
T Consensus 24 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 102 (348)
T 2pml_X 24 KEKDKYINDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKN 102 (348)
T ss_dssp SSSCEEETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCC
T ss_pred hhcccccCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCC
Confidence 33345567899999999999999999998 89999999987543211 1789999999999999
Q ss_pred CCccceeeeeEeCCeeEEEEecccCCCHHHH------Hhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCC-CCceecCCC
Q 047790 717 QNLVQLLGYCSVGEEKLLVYEYMVNGSLDDW------LRNR-AASLDWGKRCKIAYGAARGISFLHHGFK-PYIIHMDIK 788 (885)
Q Consensus 717 ~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~------l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~-~~i~H~dlk 788 (885)
|||+++++++.+.+..++||||+++++|.++ +... ...+++..+..++.|++.|++||| + .||+|||||
T Consensus 103 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~ 179 (348)
T 2pml_X 103 EYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVK 179 (348)
T ss_dssp TTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCC
T ss_pred CCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCC
Confidence 9999999999999999999999999999998 5532 456999999999999999999999 7 999999999
Q ss_pred CCcEEEcCCCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCC-CCCC-cchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 789 TSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAG-RANE-RGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 789 p~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~-~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
|+||+++.++.++|+|||.+...... ......++..|+|||+..+. .++. ++||||+|+++|+|++|+.||....
T Consensus 180 p~Nil~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 256 (348)
T 2pml_X 180 PSNILMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKI 256 (348)
T ss_dssp GGGEEECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred hHhEEEcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999876542 23445789999999999887 5665 9999999999999999999997543
No 182
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.97 E-value=2e-31 Score=293.33 Aligned_cols=202 Identities=24% Similarity=0.340 Sum_probs=172.8
Q ss_pred eeEEeecceecccCCceEEEEEe-CCCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEe--------
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSV-------- 728 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-------- 728 (885)
+.+|++.++||+|+||.||+|++ .+++.||+|++..... .....+.+|+++++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 35799999999999999999987 4689999999865432 234678899999999999999999999876
Q ss_pred CCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCc
Q 047790 729 GEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA 808 (885)
Q Consensus 729 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a 808 (885)
.+..++||||+++ ++.+.+......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 3468999999965 888888766667999999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCC---CCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 809 RLISDCE---SHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 809 ~~~~~~~---~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..+.... ........+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||...
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 232 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 232 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCC
Confidence 8765322 122234568999999998876 45799999999999999999999999754
No 183
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.97 E-value=7.2e-32 Score=297.97 Aligned_cols=203 Identities=27% Similarity=0.408 Sum_probs=172.8
Q ss_pred eeEEeecceecccCCceEEEEEe------CCCCeEEEEEeccccc-ccHHHHHHHHHHhccc-CCCCccceeeeeEeCC-
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTM------PDQKTVAVKKLSQATG-QCDREFAAEMETLDMV-KHQNLVQLLGYCSVGE- 730 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~------~~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~- 730 (885)
..+|++.+.||+|+||.||+|++ .+++.||+|++..... ...+.+.+|+++++++ +||||+++++++...+
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 100 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 100 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCC
Confidence 46799999999999999999973 2467899999976443 2345789999999999 7899999999987754
Q ss_pred eeEEEEecccCCCHHHHHhhcCC---------------------------------------------------------
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAA--------------------------------------------------------- 753 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~--------------------------------------------------------- 753 (885)
..++||||+++|+|.+++.....
T Consensus 101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (359)
T 3vhe_A 101 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 180 (359)
T ss_dssp CCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------------
T ss_pred ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcc
Confidence 48999999999999999975432
Q ss_pred --------CCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC-CcccCCCC
Q 047790 754 --------SLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES-HVSTDTAD 824 (885)
Q Consensus 754 --------~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~~~~ 824 (885)
.+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+........ .......+
T Consensus 181 ~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 257 (359)
T 3vhe_A 181 APEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257 (359)
T ss_dssp ---CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEE
T ss_pred cccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCC
Confidence 1889999999999999999999 89999999999999999999999999999987644222 22334557
Q ss_pred CCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 825 TIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 825 ~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
|..|+|||++.+..++.++||||+||++|||++ |+.||...
T Consensus 258 t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 299 (359)
T 3vhe_A 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 299 (359)
T ss_dssp CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred CceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCcc
Confidence 889999999999999999999999999999998 99999754
No 184
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.97 E-value=3e-31 Score=289.32 Aligned_cols=202 Identities=27% Similarity=0.385 Sum_probs=170.5
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccc--cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQ--CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
...+|++.+.||+|+||.||+|++.. ++.||+|++...... ..+.+.+|++++++++||||+++++++...+..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 45679999999999999999998765 889999998654322 235678999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||++++++.++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+..+....
T Consensus 103 ~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 103 FEFVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp EECCSEEHHHHHHHST-TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred EecCCcchHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 9999998888876643 45999999999999999999999 8999999999999999999999999999997765422
Q ss_pred CCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.......++..|+|||++.+. .++.++||||+||++|+|++|+.||...
T Consensus 179 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 228 (331)
T 4aaa_A 179 -EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGD 228 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred -cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 223345689999999998875 7899999999999999999999999754
No 185
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.97 E-value=4.6e-31 Score=281.34 Aligned_cols=200 Identities=24% Similarity=0.340 Sum_probs=170.1
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
..+|++.++||+|+||.||+|+.. +++.+|+|++.... ....+.+.+|++++++++||||+++++++.+....++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 356999999999999999999875 58899999987654 3345789999999999999999999999999999999999
Q ss_pred cccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE---cCCCcEEEeeccCcccc
Q 047790 738 YMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL---NDYFEAKVSDFGLARLI 811 (885)
Q Consensus 738 ~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~---~~~~~vkl~Dfg~a~~~ 811 (885)
|+++++|.+++.. ....+++..+..++.|++.|++||| +.||+||||||+||++ +..+.+||+|||.+..+
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 9999999998864 3456999999999999999999999 8999999999999999 45678999999999876
Q ss_pred cCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
... .......++..|+|||++. ..++.++||||+|+++|+|++|+.||...
T Consensus 178 ~~~--~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~ 228 (285)
T 3is5_A 178 KSD--EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGT 228 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCc--ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCC
Confidence 542 2233456899999999876 56889999999999999999999999653
No 186
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.97 E-value=6.4e-31 Score=282.01 Aligned_cols=203 Identities=22% Similarity=0.301 Sum_probs=174.2
Q ss_pred eeeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeee-EeCCeeEEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYC-SVGEEKLLVY 736 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~-~~~~~~~lv~ 736 (885)
+..+|++.+.||+|+||.||+|++ .+++.||+|++..... ..++.+|+++++.++|+++++.+.++ ......++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 446799999999999999999986 5688999999865432 34688999999999998866666554 6677889999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE---cCCCcEEEeeccCcccccC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL---NDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~---~~~~~vkl~Dfg~a~~~~~ 813 (885)
||+ +++|.+++......+++..+..++.|++.|++||| +.||+||||||+||++ +.++.+||+|||.+.....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Eec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 999 89999999866667999999999999999999999 8999999999999999 4788999999999987655
Q ss_pred CCCC------cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 814 CESH------VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 814 ~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
.... ......++..|+|||++.+..++.++||||+||++|+|++|+.||.....
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 220 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKA 220 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC
T ss_pred cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCc
Confidence 3321 12345689999999999999999999999999999999999999986443
No 187
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.97 E-value=2e-31 Score=288.43 Aligned_cols=202 Identities=30% Similarity=0.479 Sum_probs=175.8
Q ss_pred eEEeecceecccCCceEEEEEe------CCCCeEEEEEeccccc-ccHHHHHHHHHHhccc-CCCCccceeeeeEeCCee
Q 047790 661 AIIVFENVIGGGGFRTAFKGTM------PDQKTVAVKKLSQATG-QCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~------~~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~ 732 (885)
.+|++.+.||+|+||.||+|++ .+++.||+|++..... ...+.+.+|+++++++ +||||+++++++..++..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 102 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCc
Confidence 5699999999999999999974 3467899999975442 2346788999999999 899999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcCC-----------------CCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAA-----------------SLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN 795 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~-----------------~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~ 795 (885)
++||||+++++|.+++..... .+++..+..++.|++.|++||| +.||+||||||+||+++
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~ 179 (313)
T 1t46_A 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLT 179 (313)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEE
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEc
Confidence 999999999999999986432 3899999999999999999999 89999999999999999
Q ss_pred CCCcEEEeeccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 796 DYFEAKVSDFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 796 ~~~~vkl~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.++.+||+|||.+......... ......++..|+|||++.+..++.++||||+|+++|+|++ |+.||...
T Consensus 180 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 251 (313)
T 1t46_A 180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 251 (313)
T ss_dssp TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred CCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcc
Confidence 9999999999999876543222 2233456788999999999999999999999999999999 99998754
No 188
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.97 E-value=3.9e-31 Score=289.63 Aligned_cols=195 Identities=27% Similarity=0.384 Sum_probs=171.5
Q ss_pred eEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccc---cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQ---CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
.+|++.+.||+|+||.||+|+. .+++.||+|++...... ..+++.+|++++++++||||+++++++..++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 3488999999999999999986 46889999998754322 2356889999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
||+. |++.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+......
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC--
Confidence 9996 5888888766667999999999999999999999 899999999999999999999999999999765432
Q ss_pred CcccCCCCCCccCCccccc---CCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQ---AGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
....+|+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 208 ---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~ 255 (348)
T 1u5q_A 208 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 255 (348)
T ss_dssp ---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 2346899999999884 56789999999999999999999999864
No 189
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.97 E-value=1.7e-31 Score=303.48 Aligned_cols=199 Identities=32% Similarity=0.507 Sum_probs=169.2
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
..|++.++||+|+||.||+|.+.++..||+|+++... ...+.+.+|++++++++||||+++++++.. +..++||||++
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~ 261 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 261 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhc
Confidence 4589999999999999999999888889999997644 335789999999999999999999999875 67899999999
Q ss_pred CCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 741 NGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 741 ~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
+|+|.+++... ...+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||+|||.++..........
T Consensus 262 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 338 (452)
T 1fmk_A 262 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 338 (452)
T ss_dssp TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC----------
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecc
Confidence 99999999753 345899999999999999999999 89999999999999999999999999999987654332223
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
....++..|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus 339 ~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~ 384 (452)
T 1fmk_A 339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 384 (452)
T ss_dssp ----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred cCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCC
Confidence 33456788999999999999999999999999999999 9999865
No 190
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.97 E-value=1.3e-31 Score=291.62 Aligned_cols=205 Identities=26% Similarity=0.411 Sum_probs=170.0
Q ss_pred eeeeeEEeecceecccCCceEEEEEeCC-CCe----EEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCC
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMPD-QKT----VAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE 730 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~----valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 730 (885)
.+...+|++.++||+|+||.||+|++.. ++. ||+|.+.... .....++.+|++++++++||||+++++++....
T Consensus 11 ~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 90 (327)
T 3poz_A 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90 (327)
T ss_dssp ECCGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS
T ss_pred hcCHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC
Confidence 3445679999999999999999998643 443 5778775433 344578999999999999999999999998654
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
.++|+||+++|+|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.++.
T Consensus 91 -~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 91 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp -EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred -eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeE
Confidence 77899999999999999877777999999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 811 ISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 811 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
....... ......++..|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 223 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCC
Confidence 6543322 2233456789999999999999999999999999999999 99999753
No 191
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.97 E-value=1.2e-30 Score=278.95 Aligned_cols=197 Identities=27% Similarity=0.408 Sum_probs=169.9
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEe----CCee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSV----GEEK 732 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~----~~~~ 732 (885)
...|.+.+.||+|+||.||+|.+. ++..||+|++.... ......+.+|++++++++||||+++++++.. +...
T Consensus 25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (290)
T 1t4h_A 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence 456899999999999999999875 47889999987543 2334678899999999999999999998865 3568
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCC--ceecCCCCCcEEEc-CCCcEEEeeccCcc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPY--IIHMDIKTSNILLN-DYFEAKVSDFGLAR 809 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~--i~H~dlkp~Nil~~-~~~~vkl~Dfg~a~ 809 (885)
++||||+++++|.+++.... .+++..+..++.|++.|++||| +.+ |+||||||+||+++ .++.+||+|||.+.
T Consensus 105 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEEEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence 99999999999999998643 4899999999999999999999 888 99999999999997 78899999999987
Q ss_pred cccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 810 LISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
..... ......+++.|+|||++.+ .++.++||||+|+++|+|++|+.||..
T Consensus 181 ~~~~~---~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~ 231 (290)
T 1t4h_A 181 LKRAS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSE 231 (290)
T ss_dssp GCCTT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccccc---ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCC
Confidence 64432 2234568999999998874 589999999999999999999999965
No 192
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.97 E-value=2.2e-31 Score=303.86 Aligned_cols=196 Identities=24% Similarity=0.319 Sum_probs=155.5
Q ss_pred eeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeC----
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVG---- 729 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~---- 729 (885)
+.+..+|++.++||+|+||.||+|.+. +++.||+|++.... ....+++.+|+++++.++||||+++++++...
T Consensus 49 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 128 (458)
T 3rp9_A 49 WQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEK 128 (458)
T ss_dssp CCSCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTT
T ss_pred CccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCccc
Confidence 345578999999999999999999865 58899999986543 22346788999999999999999999998543
Q ss_pred -CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCc
Q 047790 730 -EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA 808 (885)
Q Consensus 730 -~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a 808 (885)
...|+||||+ +++|.+++... ..+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||+|
T Consensus 129 ~~~~~lv~e~~-~~~L~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 129 FDELYVVLEIA-DSDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp CCCEEEEECCC-SEEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred CceEEEEEecc-ccchhhhcccC-CCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccc
Confidence 5689999998 57999998754 45999999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCC--------------------------CcccCCCCCCccCCcccc-cCCCCCCcchhHHHHHHHHHHHh
Q 047790 809 RLISDCES--------------------------HVSTDTADTIGYVPSEYG-QAGRANERGDIYSFGVILLELVT 857 (885)
Q Consensus 809 ~~~~~~~~--------------------------~~~~~~~~~~~y~aPE~~-~~~~~~~~~DvwslGvvl~ellt 857 (885)
+....... .......+|+.|+|||++ .+..++.++||||+||++|||++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 87643211 112334679999999976 56679999999999999999999
No 193
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.97 E-value=1.2e-30 Score=280.91 Aligned_cols=198 Identities=26% Similarity=0.390 Sum_probs=176.4
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+++++.++||||+++++++..+...++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 45899999999999999999864 58899999987543 33457899999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+++++|.+++.. ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+..+.... ..
T Consensus 102 ~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 175 (303)
T 3a7i_A 102 LGGGSALDLLEP--GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IK 175 (303)
T ss_dssp CTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-CC
T ss_pred CCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCccc-cc
Confidence 999999999874 35899999999999999999999 8999999999999999999999999999998765432 22
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.....++..|+|||++.+..++.++||||||+++|+|++|+.||..
T Consensus 176 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 221 (303)
T 3a7i_A 176 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE 221 (303)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCC
Confidence 2345689999999999999999999999999999999999999864
No 194
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.97 E-value=1.4e-31 Score=307.35 Aligned_cols=201 Identities=29% Similarity=0.445 Sum_probs=177.3
Q ss_pred eEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..|++.++||+|+||.||+|.+.. +..||+|+++... ...+.+.+|++++++++||||+++++++..+...++||||+
T Consensus 220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~ 298 (495)
T 1opk_A 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298 (495)
T ss_dssp GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence 458899999999999999999875 8889999997643 34678999999999999999999999999989999999999
Q ss_pred cCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 740 VNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 740 ~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++|+|.+++... ...+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||+|||+++.........
T Consensus 299 ~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 375 (495)
T 1opk_A 299 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 375 (495)
T ss_dssp TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEEC
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCceee
Confidence 999999999853 345899999999999999999999 8999999999999999999999999999998765433223
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.....++..|+|||++.+..++.++|||||||++|||++ |..||...
T Consensus 376 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~ 423 (495)
T 1opk_A 376 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 423 (495)
T ss_dssp CTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred cCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCC
Confidence 333456778999999999999999999999999999999 99998653
No 195
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.97 E-value=1.1e-31 Score=291.92 Aligned_cols=205 Identities=25% Similarity=0.427 Sum_probs=171.6
Q ss_pred eeeeeEEeecceecccCCceEEEEEeCC-CCe----EEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCC
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMPD-QKT----VAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE 730 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~----valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 730 (885)
.+...+|++.++||+|+||.||+|.+.. ++. ||+|.+.... ......+.+|++++++++||||+++++++. ++
T Consensus 9 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~ 87 (325)
T 3kex_A 9 IFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GS 87 (325)
T ss_dssp BCCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BS
T ss_pred hcCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CC
Confidence 3445679999999999999999998654 444 7777765432 223356778999999999999999999886 46
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
..++||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.++.
T Consensus 88 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 88 SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp SEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred ccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccc
Confidence 688999999999999999866556899999999999999999999 89999999999999999999999999999988
Q ss_pred ccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 811 ISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 811 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
+...... ......++..|+|||++.+..++.++||||+||++|+|++ |+.||...
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 221 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL 221 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCcccc
Confidence 7543322 2334557789999999999999999999999999999999 99999753
No 196
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.97 E-value=2.3e-31 Score=291.84 Aligned_cols=200 Identities=18% Similarity=0.231 Sum_probs=165.9
Q ss_pred eeEEeecceecccCCceEEEEEeC----CCCeEEEEEecccccc-----------cHHHHHHHHHHhcccCCCCccceee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP----DQKTVAVKKLSQATGQ-----------CDREFAAEMETLDMVKHQNLVQLLG 724 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~----~~~~valK~~~~~~~~-----------~~~~~~~E~~~l~~l~~~~i~~~~~ 724 (885)
..+|++.+.||+|+||.||+|.+. .+..+|+|++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 468999999999999999999875 5778999998754321 1234667888899999999999999
Q ss_pred eeEe----CCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC--
Q 047790 725 YCSV----GEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF-- 798 (885)
Q Consensus 725 ~~~~----~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~-- 798 (885)
++.. ....++||||+ +++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTT
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCC
Confidence 9887 67889999999 999999998654 5899999999999999999999 89999999999999998777
Q ss_pred cEEEeeccCcccccCCCCC------cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 799 EAKVSDFGLARLISDCESH------VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 799 ~vkl~Dfg~a~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.+||+|||.++.+...... ......++..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 262 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQ 262 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGG
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 9999999999876432211 11345689999999999999999999999999999999999999964
No 197
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.97 E-value=1.6e-31 Score=287.54 Aligned_cols=202 Identities=20% Similarity=0.294 Sum_probs=171.9
Q ss_pred eeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..+|++.+.||+|+||.||+|.+.. ++.||+|++.........++.+|+++++.++||||+++++++..++..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 3569999999999999999998764 889999998766655678899999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+++++|.+++......+++..+..++.|++.|++||| +.|++||||||+||+++.++.++|+|||.+...... ...
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~ 173 (302)
T 2j7t_A 98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT-LQK 173 (302)
T ss_dssp CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-HHC
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc-ccc
Confidence 9999999998876667999999999999999999999 899999999999999999999999999987543221 111
Q ss_pred ccCCCCCCccCCcccc-----cCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYG-----QAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~-----~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....++..|+|||++ .+..++.++||||+|+++|+|++|+.||...
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 225 (302)
T 2j7t_A 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 225 (302)
T ss_dssp -----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccC
Confidence 2234688999999987 4677899999999999999999999998753
No 198
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.97 E-value=4.5e-31 Score=283.49 Aligned_cols=201 Identities=32% Similarity=0.515 Sum_probs=168.8
Q ss_pred eEEeecceecccCCceEEEEEeCC----CCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeee-EeCCeeEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD----QKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYC-SVGEEKLL 734 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~----~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~-~~~~~~~l 734 (885)
.+|++.++||+|+||.||+|.+.+ ...+|+|.+..... ...+.+.+|++++++++||||+++++++ ..++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 469999999999999999998643 23588998875432 2346788999999999999999999985 45567899
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||++++++.+||+|||.+..+...
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 99999999999999876677899999999999999999999 899999999999999999999999999999876542
Q ss_pred CC---CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 815 ES---HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 815 ~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.. .......+++.|+|||++.+..++.++||||+|+++|+|++ |.+||..
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~ 235 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 235 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 21 12233456788999999999999999999999999999999 5555543
No 199
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.97 E-value=7.2e-32 Score=299.63 Aligned_cols=198 Identities=14% Similarity=0.158 Sum_probs=161.3
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHH---HhcccCCCCcccee-------ee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEME---TLDMVKHQNLVQLL-------GY 725 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~---~l~~l~~~~i~~~~-------~~ 725 (885)
..+|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|++ ++++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 578999999999999999999964 58999999997432 233567889994 55556799999998 55
Q ss_pred eEeCC-----------------eeEEEEecccCCCHHHHHhhcCCC------CCHHHHHHHHHHHHHHHHHHhccCCCCc
Q 047790 726 CSVGE-----------------EKLLVYEYMVNGSLDDWLRNRAAS------LDWGKRCKIAYGAARGISFLHHGFKPYI 782 (885)
Q Consensus 726 ~~~~~-----------------~~~lv~e~~~~~sL~~~l~~~~~~------~~~~~~~~i~~~l~~~l~~LH~~~~~~i 782 (885)
+..++ ..|+||||+ +|+|.+++...... +++..+..++.|++.|++||| +.||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 55443 278999999 67999999854321 224788889999999999999 8999
Q ss_pred eecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCC-----------CCCCcchhHHHHHH
Q 047790 783 IHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAG-----------RANERGDIYSFGVI 851 (885)
Q Consensus 783 ~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----------~~~~~~DvwslGvv 851 (885)
+||||||+||+++.++.+||+|||++..... ......+ +.|+|||++.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999986432 2234456 999999999887 89999999999999
Q ss_pred HHHHHhCCCCCCCCC
Q 047790 852 LLELVTGKQPTGPEF 866 (885)
Q Consensus 852 l~elltg~~P~~~~~ 866 (885)
+|||++|+.||....
T Consensus 303 l~elltg~~Pf~~~~ 317 (377)
T 3byv_A 303 IYWIWCADLPITKDA 317 (377)
T ss_dssp HHHHHHSSCCC----
T ss_pred HHHHHHCCCCCcccc
Confidence 999999999997543
No 200
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.97 E-value=3.1e-31 Score=285.17 Aligned_cols=202 Identities=27% Similarity=0.422 Sum_probs=167.0
Q ss_pred eeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcc--cCCCCccceeeeeEe----CCee
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDM--VKHQNLVQLLGYCSV----GEEK 732 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~--l~~~~i~~~~~~~~~----~~~~ 732 (885)
+..+|++.++||+|+||.||+|++ +++.||+|++.... ...+..|.+++.. ++||||+++++++.. ....
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 456799999999999999999987 68899999986542 4455566666665 789999999998654 2457
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccC-----CCCceecCCCCCcEEEcCCCcEEEeeccC
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGF-----KPYIIHMDIKTSNILLNDYFEAKVSDFGL 807 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~-----~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~ 807 (885)
++||||+++++|.++++. ..+++..+..++.|++.|++|||... +.+|+||||||+||+++.++.+||+|||.
T Consensus 82 ~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp EEEECCCTTCBHHHHHTT--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EEehhhccCCCHHHHHhh--cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCC
Confidence 899999999999999964 34899999999999999999999321 57899999999999999999999999999
Q ss_pred cccccCCCCCc---ccCCCCCCccCCcccccCC------CCCCcchhHHHHHHHHHHHhC----------CCCCCCCC
Q 047790 808 ARLISDCESHV---STDTADTIGYVPSEYGQAG------RANERGDIYSFGVILLELVTG----------KQPTGPEF 866 (885)
Q Consensus 808 a~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslGvvl~elltg----------~~P~~~~~ 866 (885)
+.......... .....+|+.|+|||++.+. .++.++||||+||++|||++| +.||....
T Consensus 160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 97765432221 2334789999999998887 445789999999999999999 88886543
No 201
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.97 E-value=2.5e-31 Score=287.81 Aligned_cols=203 Identities=30% Similarity=0.457 Sum_probs=175.4
Q ss_pred eeEEeecceecccCCceEEEEEe------CCCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTM------PDQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~------~~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
..+|++.+.||+|+||.||+|.+ .+++.||+|++..... ...+.+.+|++++++++||||+++++++.+++..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 45699999999999999999975 2357899999975432 3346788999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcC-----------------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCC
Q 047790 733 LLVYEYMVNGSLDDWLRNRA-----------------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKT 789 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~-----------------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp 789 (885)
++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccch
Confidence 99999999999999998543 23789999999999999999999 89999999999
Q ss_pred CcEEEcCCCcEEEeeccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 790 SNILLNDYFEAKVSDFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 790 ~Nil~~~~~~vkl~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
+||+++.++.+||+|||.+......... ......+++.|+|||++.+..++.++||||+|+++|||++ |..||...
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 256 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999876543222 2233456788999999999899999999999999999999 99998753
No 202
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=4.7e-31 Score=281.67 Aligned_cols=200 Identities=24% Similarity=0.418 Sum_probs=172.2
Q ss_pred EEeecc-eecccCCceEEEEEeC---CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 662 IIVFEN-VIGGGGFRTAFKGTMP---DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 662 ~~~~~~-~lG~G~~g~vy~a~~~---~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
.|.+.+ .||+|+||.||+|.+. ++..||+|++.... ....+.+.+|++++++++||||+++++++ ..+..++||
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~ 88 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVM 88 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEE
Confidence 455555 9999999999999754 57789999997643 23456788999999999999999999999 456789999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+........
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 165 (287)
T 1u59_A 89 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 165 (287)
T ss_dssp ECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred EeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcc
Confidence 999999999999866667999999999999999999999 89999999999999999999999999999987754322
Q ss_pred Cc--ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 817 HV--STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 817 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.. .....++..|+|||++.+..++.++||||+|+++|+|++ |+.||...
T Consensus 166 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 217 (287)
T 1u59_A 166 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 217 (287)
T ss_dssp EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence 21 223346789999999998889999999999999999998 99999753
No 203
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.97 E-value=6.2e-31 Score=284.12 Aligned_cols=202 Identities=22% Similarity=0.315 Sum_probs=165.0
Q ss_pred eeeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
...+|++.+.||+|+||.||+|.. .+++.||+|++.... .....++.+|++++++++||||+++++++..++..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 345699999999999999999986 468999999987532 2234578899999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 735 VYEYMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
||||+++++|.+++.. ....+++..+..++.|++.|++||| +.|++||||||+||+++.++.++|+|||.+...
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 9999999999999874 3455899999999999999999999 899999999999999999999999999998776
Q ss_pred cCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.... .......++..|+|||++.+..++.++||||||+++|+|++|+.||..
T Consensus 187 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 238 (310)
T 2wqm_A 187 SSKT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG 238 (310)
T ss_dssp -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC-
T ss_pred cCCC-ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence 5422 222344688999999999999999999999999999999999999964
No 204
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.97 E-value=2.4e-31 Score=284.21 Aligned_cols=202 Identities=31% Similarity=0.465 Sum_probs=162.4
Q ss_pred eeeeeEEeecceecccCCceEEEEEeCCCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
.+..++|++.++||+|+||.||+|++.+ .||+|+++.... ...+.+.+|++++++++||||++++++. .....++
T Consensus 20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~l 96 (289)
T 3og7_A 20 EIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAI 96 (289)
T ss_dssp BCCTTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEE
T ss_pred ccCccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEE
Confidence 4456679999999999999999998643 599999875432 2346789999999999999999999965 4566899
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+......
T Consensus 97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 173 (289)
T 3og7_A 97 VTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173 (289)
T ss_dssp EEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred EEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceeccccccc
Confidence 99999999999999876677999999999999999999999 899999999999999999999999999998765432
Q ss_pred C-CCcccCCCCCCccCCccccc---CCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 815 E-SHVSTDTADTIGYVPSEYGQ---AGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 815 ~-~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
. ........+++.|+|||++. +..++.++||||+|+++|+|++|+.||..
T Consensus 174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 227 (289)
T 3og7_A 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN 227 (289)
T ss_dssp ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccc
Confidence 1 22223456899999999987 56678899999999999999999999975
No 205
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.97 E-value=2.6e-31 Score=291.73 Aligned_cols=202 Identities=22% Similarity=0.220 Sum_probs=169.2
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-----cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-----GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-----~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
..+|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..+
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 104 (345)
T 3hko_A 25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC 104 (345)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence 467999999999999999999874 58889999986542 234567899999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHhhc---------------------------------------CCCCCHHHHHHHHHHHHHHHHHH
Q 047790 734 LVYEYMVNGSLDDWLRNR---------------------------------------AASLDWGKRCKIAYGAARGISFL 774 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~---------------------------------------~~~~~~~~~~~i~~~l~~~l~~L 774 (885)
+||||+++++|.+++... ...+++..+..++.|++.|++||
T Consensus 105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L 184 (345)
T 3hko_A 105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL 184 (345)
T ss_dssp EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 999999999999998521 11135677889999999999999
Q ss_pred hccCCCCceecCCCCCcEEEcCCC--cEEEeeccCcccccCCCC---CcccCCCCCCccCCcccccC--CCCCCcchhHH
Q 047790 775 HHGFKPYIIHMDIKTSNILLNDYF--EAKVSDFGLARLISDCES---HVSTDTADTIGYVPSEYGQA--GRANERGDIYS 847 (885)
Q Consensus 775 H~~~~~~i~H~dlkp~Nil~~~~~--~vkl~Dfg~a~~~~~~~~---~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dvws 847 (885)
| +.+|+||||||+||+++.++ .+||+|||.+..+..... .......+++.|+|||++.+ ..++.++||||
T Consensus 185 H---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diws 261 (345)
T 3hko_A 185 H---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS 261 (345)
T ss_dssp H---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHH
T ss_pred H---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHH
Confidence 9 89999999999999998766 899999999987643221 12334568999999999875 67889999999
Q ss_pred HHHHHHHHHhCCCCCCC
Q 047790 848 FGVILLELVTGKQPTGP 864 (885)
Q Consensus 848 lGvvl~elltg~~P~~~ 864 (885)
+||++|||++|+.||..
T Consensus 262 lG~il~el~~g~~pf~~ 278 (345)
T 3hko_A 262 AGVLLHLLLMGAVPFPG 278 (345)
T ss_dssp HHHHHHHHHHSSCSSCC
T ss_pred HHHHHHHHHHCCCCCCC
Confidence 99999999999999964
No 206
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=8.3e-31 Score=281.40 Aligned_cols=199 Identities=29% Similarity=0.427 Sum_probs=169.9
Q ss_pred EEeecceecccCCceEEEEEeCC----CCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCee-EEE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPD----QKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK-LLV 735 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~----~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~-~lv 735 (885)
.|.++++||+|+||.||+|.+.+ +..||+|++..... ...+.+.+|++++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 47788999999999999998543 22699999875433 2346788999999999999999999999766554 999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+.+++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+..+....
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 9999999999999876677899999999999999999999 8999999999999999999999999999998664422
Q ss_pred ---CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 816 ---SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 816 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
........++..|+|||.+.+..++.++||||+|+++|+|++|..||.
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~ 229 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPY 229 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTT
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCC
Confidence 122233457889999999999999999999999999999999666643
No 207
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.97 E-value=3.4e-31 Score=299.31 Aligned_cols=202 Identities=27% Similarity=0.304 Sum_probs=168.2
Q ss_pred eeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeC----
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVG---- 729 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~---- 729 (885)
+-+..+|++.+.||+|+||.||+|.+. +++.||+|++.... .....++.+|+++++.++||||+++++++...
T Consensus 22 ~~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 101 (432)
T 3n9x_A 22 VHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLK 101 (432)
T ss_dssp CCCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTT
T ss_pred ceecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCc
Confidence 345678999999999999999999875 47889999997543 22346788999999999999999999998765
Q ss_pred -CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCc
Q 047790 730 -EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA 808 (885)
Q Consensus 730 -~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a 808 (885)
...|+||||++ ++|.+++... ..+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||+|
T Consensus 102 ~~~~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 102 FDELYIVLEIAD-SDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp CCCEEEEEECCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred CCeEEEEEecCC-cCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 56899999995 5999999754 45999999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCCC---------------------cccCCCCCCccCCcccc-cCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 809 RLISDCESH---------------------VSTDTADTIGYVPSEYG-QAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 809 ~~~~~~~~~---------------------~~~~~~~~~~y~aPE~~-~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
+........ ......+|+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 876542211 12445789999999985 55679999999999999999998655543
No 208
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.97 E-value=6.6e-31 Score=298.38 Aligned_cols=196 Identities=29% Similarity=0.448 Sum_probs=171.1
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCC-eeEEEEec
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE-EKLLVYEY 738 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~-~~~lv~e~ 738 (885)
...|++.+.||+|+||.||+|.+. ++.||+|+++... ..+.+.+|++++++++||||+++++++.... ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 456899999999999999999875 6789999997643 4578999999999999999999999987655 78999999
Q ss_pred ccCCCHHHHHhhcCC-CCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 739 MVNGSLDDWLRNRAA-SLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~-~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
+++|+|.+++..... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 342 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 342 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc---
Confidence 999999999986543 3689999999999999999999 899999999999999999999999999999764321
Q ss_pred cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.....++..|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 343 -~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~ 390 (450)
T 1k9a_A 343 -QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI 390 (450)
T ss_dssp -----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTS
T ss_pred -ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 122356788999999999999999999999999999998 99999754
No 209
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=2.9e-31 Score=291.26 Aligned_cols=203 Identities=27% Similarity=0.458 Sum_probs=173.4
Q ss_pred eeEEeecceecccCCceEEEEEe------CCCCeEEEEEecccc-cccHHHHHHHHHHhccc-CCCCccceeeeeEeCCe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTM------PDQKTVAVKKLSQAT-GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEE 731 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~------~~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~ 731 (885)
...|++.+.||+|+||.||+|++ .+++.||+|++.... ....+.+.+|+++++++ +||||+++++++...+.
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 123 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 123 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence 35699999999999999999985 245679999997543 23456789999999999 89999999999999999
Q ss_pred eEEEEecccCCCHHHHHhhcCC----------------------CCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCC
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAA----------------------SLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKT 789 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~----------------------~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp 789 (885)
.++||||+++++|.+++..... .+++..+..++.|++.|++||| +.||+||||||
T Consensus 124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp 200 (344)
T 1rjb_A 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAA 200 (344)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCSG
T ss_pred cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCh
Confidence 9999999999999999986432 2788999999999999999999 89999999999
Q ss_pred CcEEEcCCCcEEEeeccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 790 SNILLNDYFEAKVSDFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 790 ~Nil~~~~~~vkl~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
+||+++.++.+||+|||.+......... ......+++.|+|||++.+..++.++||||||+++|+|+| |..||...
T Consensus 201 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred hhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 9999999999999999999876543222 2233456788999999999999999999999999999998 99999754
No 210
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=5.1e-31 Score=287.50 Aligned_cols=202 Identities=28% Similarity=0.477 Sum_probs=168.5
Q ss_pred eeEEeecceecccCCceEEEEEeCC-----CCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-----QKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-----~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
..+|++.+.||+|+||.||+|.+.. +..||+|++..... .....+.+|++++++++||||+++++++...+..+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 4568899999999999999997643 23599999875432 23457889999999999999999999999889999
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+.....
T Consensus 123 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 199 (333)
T 1mqb_A 123 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 199 (333)
T ss_dssp EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhcc
Confidence 999999999999999876677999999999999999999999 89999999999999999999999999999987654
Q ss_pred CCCC--cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 814 CESH--VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 814 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.... ......++..|+|||++.+..++.++||||+|+++|||++ |+.||..
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~ 253 (333)
T 1mqb_A 200 DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE 253 (333)
T ss_dssp -----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCccc
Confidence 2211 1122345778999999999999999999999999999999 9999964
No 211
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.97 E-value=5e-31 Score=287.95 Aligned_cols=202 Identities=28% Similarity=0.476 Sum_probs=173.7
Q ss_pred eeEEeecceecccCCceEEEEEeC--------CCCeEEEEEeccccc-ccHHHHHHHHHHhccc-CCCCccceeeeeEeC
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP--------DQKTVAVKKLSQATG-QCDREFAAEMETLDMV-KHQNLVQLLGYCSVG 729 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~--------~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~ 729 (885)
..+|++.+.||+|+||.||+|++. ++..||+|++..... ....++.+|+++++++ +||||+++++++..+
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 356999999999999999999863 467899999975432 2346788999999999 899999999999999
Q ss_pred CeeEEEEecccCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE
Q 047790 730 EEKLLVYEYMVNGSLDDWLRNRA---------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL 794 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~~~---------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~ 794 (885)
+..++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEEE
Confidence 99999999999999999998543 23889999999999999999999 8999999999999999
Q ss_pred cCCCcEEEeeccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 795 NDYFEAKVSDFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 795 ~~~~~vkl~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
+.++.+||+|||.+......... ......++..|+|||++.+..++.++||||+|+++|+|++ |+.||..
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 262 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCc
Confidence 99999999999999876543221 2233456788999999998889999999999999999999 9999864
No 212
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.97 E-value=7.2e-31 Score=301.68 Aligned_cols=199 Identities=27% Similarity=0.369 Sum_probs=173.5
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
..+|++.++||+|+||.||+|++. +++.||+|++.... ......+.+|++++++++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 457999999999999999999875 68899999986532 334678899999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc---CCCcEEEeeccCcccccC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN---DYFEAKVSDFGLARLISD 813 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~---~~~~vkl~Dfg~a~~~~~ 813 (885)
||+.+++|.+.+.... .+++..+..++.|++.|++||| +.||+||||||+||+++ .++.+||+|||.+..+..
T Consensus 101 e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 9999999999887654 4899999999999999999999 89999999999999995 456799999999987654
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.. ......+|+.|+|||++.+ .++.++||||+||++|+|++|+.||...
T Consensus 177 ~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~ 225 (486)
T 3mwu_A 177 NT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK 225 (486)
T ss_dssp C------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 22 2234578999999999876 5899999999999999999999999653
No 213
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.97 E-value=5.4e-31 Score=278.63 Aligned_cols=196 Identities=23% Similarity=0.351 Sum_probs=170.6
Q ss_pred eeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeC--CeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVG--EEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~--~~~~l 734 (885)
...+|++.+.||+|+||.||+|++. ++.||+|++.... ....+.+.+|++++++++||||+++++++... ...++
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 8 DFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred CHHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 4567999999999999999999985 7889999987543 23346789999999999999999999999876 77899
Q ss_pred EEecccCCCHHHHHhhcCC-CCCHHHHHHHHHHHHHHHHHHhccCCCC--ceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 735 VYEYMVNGSLDDWLRNRAA-SLDWGKRCKIAYGAARGISFLHHGFKPY--IIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~-~~~~~~~~~i~~~l~~~l~~LH~~~~~~--i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
||||+++++|.+++..... .+++..+..++.|++.|++||| +.+ ++||||||+||+++.++.++++|||++...
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~ 163 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163 (271)
T ss_dssp EEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred eecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeee
Confidence 9999999999999986443 4899999999999999999999 889 999999999999999999999999887543
Q ss_pred cCCCCCcccCCCCCCccCCcccccCCCCCC---cchhHHHHHHHHHHHhCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYGQAGRANE---RGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~---~~DvwslGvvl~elltg~~P~~~ 864 (885)
.. ....+|+.|+|||++.+..++. ++||||+|+++|||++|+.||..
T Consensus 164 ~~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 213 (271)
T 3kmu_A 164 QS------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFAD 213 (271)
T ss_dssp SC------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTT
T ss_pred cc------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 22 2346789999999998876554 79999999999999999999964
No 214
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.97 E-value=6.2e-31 Score=279.01 Aligned_cols=203 Identities=24% Similarity=0.355 Sum_probs=176.6
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
..+|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 357999999999999999999876 58899999986543 2335678899999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC-C
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE-S 816 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~-~ 816 (885)
|+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+..+.... .
T Consensus 86 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 86 YCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp CCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred ecCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 99999999988743 45899999999999999999999 8999999999999999999999999999998764322 1
Q ss_pred CcccCCCCCCccCCcccccCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
.......++..|+|||++.+..+ +.++||||+|+++|+|++|+.||....
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 212 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSC
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCc
Confidence 22334568999999999988775 778999999999999999999997543
No 215
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.97 E-value=7.9e-31 Score=282.60 Aligned_cols=196 Identities=29% Similarity=0.443 Sum_probs=163.1
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..+|++.+.||+|+||.||+|++. ++.||+|++.... ..+.+.+|++++++++||||+++++++. +..++||||+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~ 81 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYA 81 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSSTT--HHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECC
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecChh--HHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcC
Confidence 456999999999999999999875 6789999986432 3567899999999999999999999886 3478999999
Q ss_pred cCCCHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc-EEEeeccCcccccCCCC
Q 047790 740 VNGSLDDWLRNRAA--SLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE-AKVSDFGLARLISDCES 816 (885)
Q Consensus 740 ~~~sL~~~l~~~~~--~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~-vkl~Dfg~a~~~~~~~~ 816 (885)
++++|.+++..... .++...+..++.|+++|++|||.....||+||||||+||+++.++. +||+|||.+......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-- 159 (307)
T 2eva_A 82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-- 159 (307)
T ss_dssp TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence 99999999985432 3788999999999999999999322289999999999999988776 799999998765431
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.....++..|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 205 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDE 205 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTT
T ss_pred --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchh
Confidence 2234689999999999999999999999999999999999999974
No 216
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.97 E-value=3.9e-31 Score=287.58 Aligned_cols=205 Identities=26% Similarity=0.411 Sum_probs=168.3
Q ss_pred eeeeeEEeecceecccCCceEEEEEeCC-CCe----EEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCC
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMPD-QKT----VAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE 730 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~----valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 730 (885)
.+...+|++.++||+|+||.||+|.+.. ++. ||+|.+.... ......+.+|++++++++||||+++++++....
T Consensus 11 ~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 90 (327)
T 3lzb_A 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90 (327)
T ss_dssp ECCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS
T ss_pred ccCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC
Confidence 3445679999999999999999998643 444 4677665432 345678999999999999999999999998654
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
.++++||+.+++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+..
T Consensus 91 -~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 91 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp -EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred -ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 78899999999999999877777999999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 811 ISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 811 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
+...... ......++..|+|||++.+..++.++||||+||++|||++ |+.||...
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~ 223 (327)
T 3lzb_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223 (327)
T ss_dssp -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 6543222 2233446778999999999999999999999999999999 99999753
No 217
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.97 E-value=6.8e-31 Score=284.80 Aligned_cols=201 Identities=23% Similarity=0.307 Sum_probs=170.4
Q ss_pred eeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEe----CCeeEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV----GEEKLL 734 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~----~~~~~l 734 (885)
..+|++.+.||+|+||.||+|+. .+++.||+|++........+.+.+|+++++.++||||+++++++.. ....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 46899999999999999999987 5689999999876555556788999999999999999999999863 347789
Q ss_pred EEecccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 735 VYEYMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
||||+++++|.+++.. ....+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||.+...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999999875 3456899999999999999999999 899999999999999999999999999988765
Q ss_pred cCCCCC--------cccCCCCCCccCCcccccCCC---CCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 812 SDCESH--------VSTDTADTIGYVPSEYGQAGR---ANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 812 ~~~~~~--------~~~~~~~~~~y~aPE~~~~~~---~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
...... ......+++.|+|||++.+.. ++.++||||+|+++|+|++|+.||.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 247 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTH
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChh
Confidence 321100 011234689999999987654 6889999999999999999999985
No 218
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=3.4e-31 Score=292.65 Aligned_cols=202 Identities=32% Similarity=0.491 Sum_probs=162.3
Q ss_pred eEEeecceecccCCceEEEEEeCC----CCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeE-eCCeeEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD----QKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCS-VGEEKLL 734 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~----~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~~l 734 (885)
..|++.++||+|+||.||+|.+.+ +..||+|.+.... ....+++.+|++++++++||||+++++++. .++..++
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 358889999999999999998642 2358899886533 234567899999999999999999999864 4567899
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.++.+...
T Consensus 169 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeecccccccccc
Confidence 99999999999999877667899999999999999999999 899999999999999999999999999999866432
Q ss_pred CCC---cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 815 ESH---VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 815 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
... ......++..|+|||++.+..++.++|||||||++|||++ |.+||...
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~ 300 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 300 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCC
Confidence 211 1223456788999999999999999999999999999999 67777543
No 219
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.97 E-value=1.1e-30 Score=290.71 Aligned_cols=196 Identities=24% Similarity=0.308 Sum_probs=165.2
Q ss_pred eeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEe----------
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV---------- 728 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~---------- 728 (885)
..+|++.++||+|+||.||+|.+ .+++.||+|++..... ...+|+++++.++||||+++++++..
T Consensus 6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 81 (383)
T 3eb0_A 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQ 81 (383)
T ss_dssp CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC---------
T ss_pred cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccccccc
Confidence 45799999999999999999986 4689999999865432 23479999999999999999998843
Q ss_pred ----------------------------CCeeEEEEecccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhcc
Q 047790 729 ----------------------------GEEKLLVYEYMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHG 777 (885)
Q Consensus 729 ----------------------------~~~~~lv~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~ 777 (885)
..+.++||||++ ++|.+.+.. ....+++..+..++.|++.|++|||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH-- 158 (383)
T 3eb0_A 82 PPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH-- 158 (383)
T ss_dssp ----------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH--
T ss_pred cccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH--
Confidence 334789999997 487777653 4456999999999999999999999
Q ss_pred CCCCceecCCCCCcEEEc-CCCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHH
Q 047790 778 FKPYIIHMDIKTSNILLN-DYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLEL 855 (885)
Q Consensus 778 ~~~~i~H~dlkp~Nil~~-~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~el 855 (885)
+.||+||||||+||+++ .++.+||+|||.|+.+.... ......+++.|+|||++.+. .++.++||||+||++|||
T Consensus 159 -~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el 235 (383)
T 3eb0_A 159 -SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGEL 235 (383)
T ss_dssp -TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred -HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHH
Confidence 99999999999999997 68899999999998765432 22345689999999998775 489999999999999999
Q ss_pred HhCCCCCCCC
Q 047790 856 VTGKQPTGPE 865 (885)
Q Consensus 856 ltg~~P~~~~ 865 (885)
++|+.||.+.
T Consensus 236 l~g~~pf~~~ 245 (383)
T 3eb0_A 236 ILGKPLFSGE 245 (383)
T ss_dssp HHSSCSSCCS
T ss_pred HhCCCCCCCC
Confidence 9999999754
No 220
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=4.7e-31 Score=291.37 Aligned_cols=198 Identities=27% Similarity=0.352 Sum_probs=166.5
Q ss_pred eeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCC----
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGE---- 730 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~---- 730 (885)
-+..+|++.+.||+|+||.||+|.+. +|+.||+|++..... ....++.+|+++++.++||||+++++++....
T Consensus 22 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 101 (367)
T 1cm8_A 22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD 101 (367)
T ss_dssp CCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTT
T ss_pred eecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcccc
Confidence 34567999999999999999999874 589999999865332 23467889999999999999999999987653
Q ss_pred --eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCc
Q 047790 731 --EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA 808 (885)
Q Consensus 731 --~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a 808 (885)
..|+||||+ +++|.+++.. ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+
T Consensus 102 ~~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 175 (367)
T 1cm8_A 102 FTDFYLVMPFM-GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLA 175 (367)
T ss_dssp CCCCEEEEECC-SEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred CceEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecc
Confidence 459999999 8899999976 34899999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 809 RLISDCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.
T Consensus 176 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 229 (367)
T 1cm8_A 176 RQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS 229 (367)
T ss_dssp EECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCC
Confidence 875432 234568999999999887 67899999999999999999999999754
No 221
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.97 E-value=5.4e-31 Score=291.23 Aligned_cols=200 Identities=20% Similarity=0.241 Sum_probs=165.9
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccc-----------cHHHHHHHHHHhcccCCCCccceeeeeEe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQ-----------CDREFAAEMETLDMVKHQNLVQLLGYCSV 728 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~-----------~~~~~~~E~~~l~~l~~~~i~~~~~~~~~ 728 (885)
..+|++.+.||+|+||.||+|.+.+++.||+|++...... ..+.+.+|++++++++||||+++++++..
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 100 (362)
T 3pg1_A 21 QSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVH 100 (362)
T ss_dssp TCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEE
T ss_pred ccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEe
Confidence 4679999999999999999999888999999998653321 12678999999999999999999999854
Q ss_pred -----CCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEe
Q 047790 729 -----GEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVS 803 (885)
Q Consensus 729 -----~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~ 803 (885)
....++||||++ +++.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+
T Consensus 101 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~ 176 (362)
T 3pg1_A 101 FEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITIC 176 (362)
T ss_dssp CCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred ccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEEcCCCCEEEE
Confidence 236799999996 6898888876667999999999999999999999 8999999999999999999999999
Q ss_pred eccCcccccCCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 804 DFGLARLISDCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 804 Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
|||.+...... .......+++.|+|||++.+ ..++.++||||+||++|+|++|+.||...
T Consensus 177 Dfg~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 237 (362)
T 3pg1_A 177 DFNLAREDTAD--ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS 237 (362)
T ss_dssp CTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ecCcccccccc--cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCC
Confidence 99999764432 22234568899999998877 67899999999999999999999999764
No 222
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.97 E-value=1.2e-30 Score=300.34 Aligned_cols=199 Identities=24% Similarity=0.384 Sum_probs=170.1
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
..+|++.++||+|+||.||+|++. ++..||+|++.+.. ......+.+|+++++.++||||+++++++.+....|+||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 346999999999999999999876 58889999987543 334577899999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCC---CcEEEeeccCcccccC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY---FEAKVSDFGLARLISD 813 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~---~~vkl~Dfg~a~~~~~ 813 (885)
||+++++|.+.+..+. .+++..+..++.|++.|++||| +.||+||||||+||+++.. +.+||+|||++..+..
T Consensus 116 e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred ecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 9999999999887554 4899999999999999999999 8999999999999999754 4599999999987654
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.. ......+|+.|+|||++. ..++.++||||+||++|+|++|+.||...
T Consensus 192 ~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~ 240 (494)
T 3lij_A 192 QK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQ 240 (494)
T ss_dssp TB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred Cc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCC
Confidence 32 233457999999999876 46899999999999999999999999753
No 223
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.97 E-value=1e-30 Score=280.84 Aligned_cols=200 Identities=25% Similarity=0.342 Sum_probs=171.4
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
.+|++.+.||+|+||.||+|++. +++.||+|++..... .....+.+|++++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 46999999999999999999876 589999999865432 234678899999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 738 YMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
|+. ++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+.......
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~- 157 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 157 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS-
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc-
Confidence 996 59999987543 45899999999999999999999 8999999999999999999999999999987765422
Q ss_pred CcccCCCCCCccCCcccccCCC-CCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGR-ANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.......++..|+|||++.+.. ++.++||||+|+++|+|++|+.||...
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 207 (299)
T 2r3i_A 158 RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207 (299)
T ss_dssp BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 2223446789999999988765 789999999999999999999999754
No 224
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.97 E-value=7.3e-31 Score=284.46 Aligned_cols=197 Identities=26% Similarity=0.398 Sum_probs=170.9
Q ss_pred EeecceecccCCceEEEEEeC-----CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeC--CeeEE
Q 047790 663 IVFENVIGGGGFRTAFKGTMP-----DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVG--EEKLL 734 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~-----~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~--~~~~l 734 (885)
|++.++||+|+||.||++.+. +++.||+|++..... .....+.+|++++++++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 599999999999999988643 578899999976532 3346789999999999999999999999874 67899
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+++++|.+++.... +++..+..++.|++.+++||| +.||+||||||+||+++.++.+||+|||.+..+...
T Consensus 113 v~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp EECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 999999999999997643 899999999999999999999 899999999999999999999999999999887543
Q ss_pred CCC--cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 815 ESH--VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 815 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
... ......++..|+|||++.+..++.++||||+|+++|+|++|+.||..
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~ 239 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQS 239 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccc
Confidence 221 22334577889999999999999999999999999999999999864
No 225
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.97 E-value=5.2e-31 Score=303.03 Aligned_cols=200 Identities=25% Similarity=0.337 Sum_probs=176.2
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
+..+|++.++||+|+||.||+|++. +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4467999999999999999999876 68999999986543 2346789999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE---cCCCcEEEeeccCcccc
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL---NDYFEAKVSDFGLARLI 811 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~---~~~~~vkl~Dfg~a~~~ 811 (885)
||||+.+++|.+++..+. .+++..+..++.|++.|++||| +.||+||||||+||++ +.++.+||+|||.+..+
T Consensus 104 v~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp EECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 999999999999987544 5899999999999999999999 8999999999999999 46788999999999876
Q ss_pred cCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.... ......+|+.|+|||++.+ .++.++||||+||++|+|++|+.||...
T Consensus 180 ~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~ 230 (484)
T 3nyv_A 180 EASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGA 230 (484)
T ss_dssp CCCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCC
Confidence 5432 2233568999999999876 6899999999999999999999999754
No 226
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.97 E-value=5.3e-31 Score=286.70 Aligned_cols=203 Identities=28% Similarity=0.428 Sum_probs=176.1
Q ss_pred eeeEEeecceecccCCceEEEEEe-----CCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeC--Ce
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTM-----PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVG--EE 731 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~-----~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~--~~ 731 (885)
...+|++.+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++... ..
T Consensus 39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 118 (326)
T 2w1i_A 39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 118 (326)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence 445699999999999999999983 35889999999876555567899999999999999999999988654 36
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
.++||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+...
T Consensus 119 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~ 195 (326)
T 2w1i_A 119 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVL 195 (326)
T ss_dssp CEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred eEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence 79999999999999999877667999999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCCC--cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 812 SDCESH--VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 812 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
...... ......++..|+|||++.+..++.++||||+|+++|+|++|..||..
T Consensus 196 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~ 250 (326)
T 2w1i_A 196 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 250 (326)
T ss_dssp CSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGS
T ss_pred cccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCC
Confidence 543221 12234567789999999988899999999999999999999998763
No 227
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.97 E-value=9.7e-31 Score=282.21 Aligned_cols=201 Identities=43% Similarity=0.692 Sum_probs=172.8
Q ss_pred EeecceecccCCceEEEEEeCCCCeEEEEEecccc----cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQAT----GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
|..++.||+|+||.||+|.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 33 ~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 111 (307)
T 2nru_A 33 SVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVY 111 (307)
T ss_dssp TTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred cccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEe
Confidence 45578999999999999987 67889999986532 22346789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 739 MVNGSLDDWLRN--RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 739 ~~~~sL~~~l~~--~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
+++++|.+++.. ....+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+........
T Consensus 112 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 188 (307)
T 2nru_A 112 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188 (307)
T ss_dssp CTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSS
T ss_pred cCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEEcCCCcEEEeecccccccccccc
Confidence 999999999874 2345899999999999999999999 89999999999999999999999999999987654222
Q ss_pred C-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCC
Q 047790 817 H-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFED 868 (885)
Q Consensus 817 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~~ 868 (885)
. ......+++.|+|||++.+ .++.++||||+|+++|+|++|+.||......
T Consensus 189 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 240 (307)
T 2nru_A 189 TVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP 240 (307)
T ss_dssp CEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSS
T ss_pred cccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcch
Confidence 2 2334568999999998765 4789999999999999999999999865443
No 228
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.97 E-value=4.2e-31 Score=287.09 Aligned_cols=202 Identities=26% Similarity=0.447 Sum_probs=174.0
Q ss_pred eeEEeecceecccCCceEEEEEeC------CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~------~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
..+|++.+.||+|+||.||+|.+. .++.||+|++..... ....++.+|++++++++||||+++++++.+.+..
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 103 (322)
T 1p4o_A 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 103 (322)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCcc
Confidence 457999999999999999999764 367899999975432 2345688999999999999999999999988999
Q ss_pred EEEEecccCCCHHHHHhhcC---------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEe
Q 047790 733 LLVYEYMVNGSLDDWLRNRA---------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVS 803 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~---------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~ 803 (885)
++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+
T Consensus 104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~~~~kl~ 180 (322)
T 1p4o_A 104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIG 180 (322)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCEEEC
T ss_pred EEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCCCeEEEC
Confidence 99999999999999987522 34689999999999999999999 8999999999999999999999999
Q ss_pred eccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 804 DFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 804 Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
|||.+......... ......+++.|+|||++.+..++.++||||+|+++|+|++ |+.||..
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 243 (322)
T 1p4o_A 181 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 243 (322)
T ss_dssp CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTT
T ss_pred cCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCcccc
Confidence 99999866432211 2223346788999999999999999999999999999999 8999865
No 229
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.97 E-value=1.2e-30 Score=301.15 Aligned_cols=200 Identities=27% Similarity=0.378 Sum_probs=172.1
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEeccccc-------------ccHHHHHHHHHHhcccCCCCccceee
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATG-------------QCDREFAAEMETLDMVKHQNLVQLLG 724 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~-------------~~~~~~~~E~~~l~~l~~~~i~~~~~ 724 (885)
+..+|++.++||+|+||.||+|.+.. ++.||+|++..... ...+.+.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 34679999999999999999998764 78899999875431 23467889999999999999999999
Q ss_pred eeEeCCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC---cEE
Q 047790 725 YCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF---EAK 801 (885)
Q Consensus 725 ~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~---~vk 801 (885)
++.+....++||||+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++ .+|
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEE
Confidence 9999999999999999999999987654 4899999999999999999999 89999999999999998765 699
Q ss_pred EeeccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 802 VSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 802 l~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
|+|||.+..+... .......+|+.|+|||++. ..++.++||||+||++|+|++|+.||...
T Consensus 190 l~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~ 250 (504)
T 3q5i_A 190 IVDFGLSSFFSKD--YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQ 250 (504)
T ss_dssp ECCCTTCEECCTT--SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EEECCCCEEcCCC--CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999876543 2233457999999999987 46899999999999999999999999754
No 230
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.97 E-value=1.9e-30 Score=277.14 Aligned_cols=196 Identities=20% Similarity=0.287 Sum_probs=169.5
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv 735 (885)
..+|++.+.||+|+||.||+|.+. +++.||+|++.... ......+.+|+.++..+ +||||+++++++.+++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 356999999999999999999876 68999999987543 23346788899999998 899999999999999999999
Q ss_pred EecccCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC----------------
Q 047790 736 YEYMVNGSLDDWLRNR---AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND---------------- 796 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~---------------- 796 (885)
|||+++++|.+++... ...+++..+..++.|++.|++||| +.||+||||||+||+++.
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 9999999999999753 245899999999999999999999 899999999999999984
Q ss_pred ---CCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 797 ---YFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 797 ---~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
...++++|||.+...... ....++..|+|||++.+. .++.++||||+||++|+|++|..|+.
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~ 232 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSP-----QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPR 232 (289)
T ss_dssp ---CCCEEECCCTTCEETTCS-----CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCS
T ss_pred cCCceEEEEcccccccccCCc-----cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCc
Confidence 447999999999876542 223589999999998876 56689999999999999999987754
No 231
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.97 E-value=6.7e-31 Score=295.47 Aligned_cols=200 Identities=23% Similarity=0.312 Sum_probs=162.5
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--------ccHHHHHHHHHHhcccCCCCccceeeeeEeCC
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--------QCDREFAAEMETLDMVKHQNLVQLLGYCSVGE 730 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--------~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 730 (885)
..+|.+.+.||+|+||.||+|.+. +++.||+|++..... .....+.+|++++++++||||+++++++. .+
T Consensus 134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~ 212 (419)
T 3i6u_A 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AE 212 (419)
T ss_dssp HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SS
T ss_pred hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cC
Confidence 356999999999999999999865 488999999875321 11224789999999999999999999975 45
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC---cEEEeeccC
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF---EAKVSDFGL 807 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~---~vkl~Dfg~ 807 (885)
..++||||+++++|.+++... ..+++..+..++.|++.|++||| +.+|+||||||+||+++..+ .+||+|||.
T Consensus 213 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~ 288 (419)
T 3i6u_A 213 DYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 288 (419)
T ss_dssp EEEEEEECCTTCBGGGGTSSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCSST
T ss_pred ceEEEEEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeeccc
Confidence 679999999999999988754 45899999999999999999999 89999999999999997544 599999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccC---CCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQA---GRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
++..... .......+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||....
T Consensus 289 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~ 348 (419)
T 3i6u_A 289 SKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 348 (419)
T ss_dssp TTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCS
T ss_pred ceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCc
Confidence 9876542 22334578999999999864 567889999999999999999999997543
No 232
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.97 E-value=1.1e-30 Score=289.33 Aligned_cols=199 Identities=27% Similarity=0.302 Sum_probs=163.8
Q ss_pred eeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCC----
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE---- 730 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~---- 730 (885)
.+..+|++.+.||+|+||.||+|.+. +++.||+|++.... ......+.+|+++++.++||||+++++++...+
T Consensus 22 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 101 (371)
T 2xrw_A 22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 101 (371)
T ss_dssp EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTT
T ss_pred chhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccc
Confidence 45678999999999999999999865 58889999987533 223456889999999999999999999987654
Q ss_pred --eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCc
Q 047790 731 --EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA 808 (885)
Q Consensus 731 --~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a 808 (885)
..++||||+++ ++.+.+.. .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+
T Consensus 102 ~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 174 (371)
T 2xrw_A 102 FQDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174 (371)
T ss_dssp CCEEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC-
T ss_pred ccceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecc
Confidence 78999999964 78888862 3889999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 809 RLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
...... .......+|+.|+|||++.+..++.++||||+||++|+|++|+.||.+.
T Consensus 175 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 229 (371)
T 2xrw_A 175 RTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 229 (371)
T ss_dssp -----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 876432 2223457899999999999999999999999999999999999999754
No 233
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.97 E-value=6.9e-31 Score=293.03 Aligned_cols=201 Identities=24% Similarity=0.268 Sum_probs=166.4
Q ss_pred eeeeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCC------
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE------ 730 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~------ 730 (885)
.....+|++.++||+|+||.||+|++.++..+|+|++...... ..+|+++++.++||||+++++++....
T Consensus 36 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~ 111 (394)
T 4e7w_A 36 EQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEV 111 (394)
T ss_dssp CEEEEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCE
T ss_pred CcccceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCce
Confidence 3456789999999999999999999888778999988654322 236999999999999999999985433
Q ss_pred eeEEEEecccCCCHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc-CCCcEEEeeccC
Q 047790 731 EKLLVYEYMVNGSLDDWLR--NRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN-DYFEAKVSDFGL 807 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~--~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~-~~~~vkl~Dfg~ 807 (885)
..++||||++++.+..... .....+++..++.++.|++.|++||| +.||+||||||+||+++ .++.+||+|||.
T Consensus 112 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~ 188 (394)
T 4e7w_A 112 FLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGS 188 (394)
T ss_dssp EEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCC
Confidence 3789999997643333322 23456999999999999999999999 89999999999999999 789999999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
|+.+..... .....+++.|+|||++.+. .++.++||||+||++|||++|+.||.+..
T Consensus 189 a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 246 (394)
T 4e7w_A 189 AKILIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES 246 (394)
T ss_dssp CEECCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 987654322 2345689999999998765 58999999999999999999999997543
No 234
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.97 E-value=1.5e-30 Score=277.25 Aligned_cols=195 Identities=26% Similarity=0.401 Sum_probs=171.3
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEe----------
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV---------- 728 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~---------- 728 (885)
..+|++.+.||+|+||.||+|.+. +++.||+|++.... ..+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 456999999999999999999876 68999999986543 356789999999999999999998754
Q ss_pred ------CCeeEEEEecccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEE
Q 047790 729 ------GEEKLLVYEYMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAK 801 (885)
Q Consensus 729 ------~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vk 801 (885)
....++||||+++++|.+++... ...+++..+..++.|++.|++||| +.||+||||||+||+++.++.++
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCEE
Confidence 34578999999999999999753 355899999999999999999999 89999999999999999999999
Q ss_pred EeeccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 802 VSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 802 l~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
|+|||.+....... ......+++.|+|||++.+..++.++||||+|+++|+|++|..||.
T Consensus 163 l~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~ 222 (284)
T 2a19_B 163 IGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF 222 (284)
T ss_dssp ECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHH
T ss_pred ECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcch
Confidence 99999998765432 2234568999999999999999999999999999999999998864
No 235
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.97 E-value=1.7e-30 Score=284.18 Aligned_cols=201 Identities=26% Similarity=0.351 Sum_probs=157.5
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccC-CCCccceeeeeE--------eC
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQNLVQLLGYCS--------VG 729 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~--------~~ 729 (885)
..+|++.++||+|+||.||+|++. +++.||+|++..........+.+|+.+++++. ||||+++++++. ..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 458999999999999999999865 58899999986655555677889999999996 999999999984 23
Q ss_pred CeeEEEEecccCCCHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHhccCCCC--ceecCCCCCcEEEcCCCcEEEeec
Q 047790 730 EEKLLVYEYMVNGSLDDWLRN--RAASLDWGKRCKIAYGAARGISFLHHGFKPY--IIHMDIKTSNILLNDYFEAKVSDF 805 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~--~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~--i~H~dlkp~Nil~~~~~~vkl~Df 805 (885)
...++||||+. |+|.+++.. ....+++..+..++.|++.|++||| +.+ |+||||||+||+++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEecC
Confidence 45789999995 699998864 3455999999999999999999999 888 999999999999999999999999
Q ss_pred cCcccccCCCCC-----------cccCCCCCCccCCcccc---cCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 806 GLARLISDCESH-----------VSTDTADTIGYVPSEYG---QAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 806 g~a~~~~~~~~~-----------~~~~~~~~~~y~aPE~~---~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
|.+......... ......+++.|+|||++ .+..++.++||||+||++|+|++|+.||..
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 255 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED 255 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence 999876542211 11134588999999998 566788999999999999999999999874
No 236
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.97 E-value=3.7e-31 Score=306.66 Aligned_cols=201 Identities=32% Similarity=0.495 Sum_probs=175.2
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
...|++.++||+|+||.||+|.+.++..||+|+++... ...+.+.+|++++++++||||+++++++.+ +..++||||+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 34689999999999999999999888889999997644 335789999999999999999999999875 6789999999
Q ss_pred cCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 740 VNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 740 ~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++|+|.+++... ...+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||+|||+++.+.......
T Consensus 344 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 420 (535)
T 2h8h_A 344 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 420 (535)
T ss_dssp TTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHT
T ss_pred cCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceec
Confidence 999999999753 345899999999999999999999 8999999999999999999999999999998765322122
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.....++..|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 421 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~ 468 (535)
T 2h8h_A 421 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 468 (535)
T ss_dssp TCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC
T ss_pred ccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 233446788999999999999999999999999999999 99999653
No 237
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.97 E-value=2.1e-30 Score=286.05 Aligned_cols=199 Identities=26% Similarity=0.367 Sum_probs=173.7
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc--------cHHHHHHHHHHhccc-CCCCccceeeeeEeC
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ--------CDREFAAEMETLDMV-KHQNLVQLLGYCSVG 729 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~--------~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~ 729 (885)
..+|++.+.||+|+||.||+|++. +|+.||+|++...... ..+.+.+|+++++++ +||||+++++++...
T Consensus 93 ~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 172 (365)
T 2y7j_A 93 YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESS 172 (365)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBS
T ss_pred hhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeC
Confidence 356999999999999999999875 6999999998654311 134678899999999 799999999999999
Q ss_pred CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcc
Q 047790 730 EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLAR 809 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~ 809 (885)
...++||||+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.++++|||.+.
T Consensus 173 ~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~ 248 (365)
T 2y7j_A 173 SFMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSC 248 (365)
T ss_dssp SEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEecCccc
Confidence 99999999999999999998543 4899999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCCCcccCCCCCCccCCcccccC------CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 810 LISDCESHVSTDTADTIGYVPSEYGQA------GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.+.... ......+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||..
T Consensus 249 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 307 (365)
T 2y7j_A 249 HLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH 307 (365)
T ss_dssp ECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCC
Confidence 765432 2234578999999998763 3678899999999999999999999964
No 238
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.97 E-value=3.6e-31 Score=291.31 Aligned_cols=197 Identities=14% Similarity=0.188 Sum_probs=169.7
Q ss_pred eeEEeecceecccCCceEEEEEeCC---------CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccc---------
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD---------QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQ--------- 721 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~---------~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~--------- 721 (885)
..+|++.+.||+|+||.||+|++.. ++.||+|++... ..+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3689999999999999999998764 788999998653 46788999999999999887
Q ss_pred ------eeeeeEe-CCeeEEEEecccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEE
Q 047790 722 ------LLGYCSV-GEEKLLVYEYMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNIL 793 (885)
Q Consensus 722 ------~~~~~~~-~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil 793 (885)
+++++.. +...++||||+ +++|.+++... ...+++..+..++.|++.|++||| +.||+||||||+||+
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEE
Confidence 5666665 67889999999 99999999864 355999999999999999999999 899999999999999
Q ss_pred EcCCC--cEEEeeccCcccccCCCCC------cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 794 LNDYF--EAKVSDFGLARLISDCESH------VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 794 ~~~~~--~vkl~Dfg~a~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
++.++ .+||+|||.+..+...... ......+++.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99988 8999999999876542211 113346899999999999999999999999999999999999999754
No 239
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.97 E-value=5.8e-31 Score=286.61 Aligned_cols=202 Identities=30% Similarity=0.461 Sum_probs=169.8
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCe--EEEEEecccc-cccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKT--VAVKKLSQAT-GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~--valK~~~~~~-~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~ 733 (885)
...+|++.+.||+|+||.||+|++.. +.. +|+|.+.... ....+++.+|+++++++ +||||+++++++.+++..+
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 23 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred cHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 34679999999999999999998654 554 4888886533 23345788999999999 8999999999999999999
Q ss_pred EEEecccCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC
Q 047790 734 LVYEYMVNGSLDDWLRNRA---------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF 798 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~---------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~ 798 (885)
+||||+++++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~ 179 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENY 179 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGG
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCC
Confidence 9999999999999997543 35899999999999999999999 89999999999999999999
Q ss_pred cEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 799 EAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 799 ~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.+||+|||.+...... .......++..|+|||++.+..++.++||||+|+++|+|++ |+.||...
T Consensus 180 ~~kL~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~ 245 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 245 (327)
T ss_dssp CEEECCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred eEEEcccCcCcccccc--ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCC
Confidence 9999999998753321 12223456788999999998889999999999999999998 99999643
No 240
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.97 E-value=1.9e-30 Score=278.13 Aligned_cols=194 Identities=26% Similarity=0.396 Sum_probs=166.2
Q ss_pred ceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCCCHH
Q 047790 667 NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLD 745 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL~ 745 (885)
..||+|+||.||+|.+. +++.||+|++........+.+.+|+++++.++||||+++++++...+..++||||+++++|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence 39999999999999864 58889999997765555678999999999999999999999999999999999999999999
Q ss_pred HHHhhcC--CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC-CCcEEEeeccCcccccCCCCCcccCC
Q 047790 746 DWLRNRA--ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND-YFEAKVSDFGLARLISDCESHVSTDT 822 (885)
Q Consensus 746 ~~l~~~~--~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~-~~~vkl~Dfg~a~~~~~~~~~~~~~~ 822 (885)
+++.... ...++..+..++.|++.|++||| +.||+||||||+||+++. ++.++|+|||.+....... ......
T Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~ 183 (295)
T 2clq_A 108 ALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-PCTETF 183 (295)
T ss_dssp HHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC------CCC
T ss_pred HHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC-Cccccc
Confidence 9998643 23668889999999999999999 899999999999999987 8899999999998765422 222345
Q ss_pred CCCCccCCcccccCCC--CCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 823 ADTIGYVPSEYGQAGR--ANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 823 ~~~~~y~aPE~~~~~~--~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.++..|+|||++.+.. ++.++||||+|+++|+|++|+.||..
T Consensus 184 ~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 227 (295)
T 2clq_A 184 TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE 227 (295)
T ss_dssp CCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGG
T ss_pred CCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccC
Confidence 6899999999987643 78899999999999999999999863
No 241
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.97 E-value=2.7e-31 Score=282.29 Aligned_cols=202 Identities=23% Similarity=0.288 Sum_probs=170.9
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEe--CCeeEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSV--GEEKLL 734 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~--~~~~~l 734 (885)
..+|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++.. ....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 356999999999999999999875 58899999987543 2234678899999999999999999998754 568899
Q ss_pred EEecccCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHhccCCCC-----ceecCCCCCcEEEcCCCcEEEeecc
Q 047790 735 VYEYMVNGSLDDWLRNR---AASLDWGKRCKIAYGAARGISFLHHGFKPY-----IIHMDIKTSNILLNDYFEAKVSDFG 806 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~-----i~H~dlkp~Nil~~~~~~vkl~Dfg 806 (885)
||||+++++|.+++... ...+++..+..++.|++.|++||| +.+ |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 99999999999998752 334899999999999999999999 778 9999999999999999999999999
Q ss_pred CcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 807 LARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 807 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.+....... .......++..|+|||++.+..++.++||||+|+++|+|++|+.||...
T Consensus 162 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 219 (279)
T 2w5a_A 162 LARILNHDT-SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF 219 (279)
T ss_dssp HHHHC---C-HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred hheeecccc-ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCccc
Confidence 987765321 1122346889999999999999999999999999999999999999753
No 242
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.97 E-value=6.1e-31 Score=296.57 Aligned_cols=199 Identities=25% Similarity=0.288 Sum_probs=172.0
Q ss_pred eeeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhccc------CCCCccceeeeeEeCC
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMV------KHQNLVQLLGYCSVGE 730 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l------~~~~i~~~~~~~~~~~ 730 (885)
.+..+|++.++||+|+||.||+|.+.. ++.||+|++.... .....+.+|+++++.+ .|+||+++++++....
T Consensus 94 ~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 172 (429)
T 3kvw_A 94 HVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN 172 (429)
T ss_dssp EETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT
T ss_pred cccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC
Confidence 445679999999999999999998654 8899999987543 2245677888888877 4679999999999999
Q ss_pred eeEEEEecccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc--EEEeeccC
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE--AKVSDFGL 807 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~--vkl~Dfg~ 807 (885)
..++||||+. ++|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++. +||+|||.
T Consensus 173 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~ 248 (429)
T 3kvw_A 173 HICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGS 248 (429)
T ss_dssp EEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred eEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeeccc
Confidence 9999999995 69999887543 45899999999999999999999 899999999999999998887 99999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+..... ......+|+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 249 a~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 249 SCYEHQ----RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp CEETTC----CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ceecCC----cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 976442 223457899999999999999999999999999999999999999754
No 243
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.97 E-value=3.2e-31 Score=293.80 Aligned_cols=198 Identities=10% Similarity=0.040 Sum_probs=153.8
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc---ccHHHHHHHHHHhccc--CCCCcccee-------eee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG---QCDREFAAEMETLDMV--KHQNLVQLL-------GYC 726 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~---~~~~~~~~E~~~l~~l--~~~~i~~~~-------~~~ 726 (885)
...|++.+.||+|+||.||+|++. +++.||+|++..... .....+.+|+++++.+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 345999999999999999999875 688999999986442 2345677885555544 699988755 333
Q ss_pred EeC-----------------CeeEEEEecccCCCHHHHHhhcCCCCCHHHH------HHHHHHHHHHHHHHhccCCCCce
Q 047790 727 SVG-----------------EEKLLVYEYMVNGSLDDWLRNRAASLDWGKR------CKIAYGAARGISFLHHGFKPYII 783 (885)
Q Consensus 727 ~~~-----------------~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~------~~i~~~l~~~l~~LH~~~~~~i~ 783 (885)
... ...|+||||++ ++|.+++......++...+ ..++.|++.|++||| +.||+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~iv 216 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLV 216 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCc
Confidence 322 33799999998 8999999864444555555 678899999999999 89999
Q ss_pred ecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccC--CCCCCcchhHHHHHHHHHHHhCCCC
Q 047790 784 HMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQA--GRANERGDIYSFGVILLELVTGKQP 861 (885)
Q Consensus 784 H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGvvl~elltg~~P 861 (885)
||||||+||+++.++.+||+|||.++..... .....+++.|+|||++.+ ..++.++||||+||++|||++|+.|
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999876431 113456699999999987 6789999999999999999999999
Q ss_pred CCCC
Q 047790 862 TGPE 865 (885)
Q Consensus 862 ~~~~ 865 (885)
|...
T Consensus 293 f~~~ 296 (371)
T 3q60_A 293 FGLV 296 (371)
T ss_dssp TTBC
T ss_pred CCCc
Confidence 9865
No 244
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.97 E-value=2.7e-30 Score=281.80 Aligned_cols=195 Identities=17% Similarity=0.250 Sum_probs=171.1
Q ss_pred eeeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhcccC-CCCccceeeeeEe--CCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQNLVQLLGYCSV--GEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~--~~~~~l 734 (885)
...+|++.++||+|+||.||+|++ .+++.||+|++... ....+.+|++++++++ ||||+++++++.. ....++
T Consensus 34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l 110 (330)
T 3nsz_A 34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 110 (330)
T ss_dssp EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence 346799999999999999999986 46889999998643 3577899999999997 9999999999987 567899
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC-cEEEeeccCcccccC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF-EAKVSDFGLARLISD 813 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~-~vkl~Dfg~a~~~~~ 813 (885)
||||+.++++.+++.. +++..+..++.|++.|++||| +.||+||||||+||+++.++ .+||+|||.+..+..
T Consensus 111 v~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 111 VFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp EEECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred EEeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 9999999999998863 888999999999999999999 89999999999999999666 899999999987654
Q ss_pred CCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.. ......++..|+|||++.+ ..++.++||||+||++|+|++|+.||...
T Consensus 184 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~ 234 (330)
T 3nsz_A 184 GQ--EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG 234 (330)
T ss_dssp TC--CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred CC--ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 32 2334578899999999887 67899999999999999999999999543
No 245
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.97 E-value=7.4e-31 Score=290.09 Aligned_cols=202 Identities=24% Similarity=0.333 Sum_probs=172.0
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeC-----Cee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVG-----EEK 732 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~-----~~~ 732 (885)
..+|++.+.||+|+||.||+|.+. +++.||+|++..... .....+.+|++++++++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 468999999999999999999865 578899999975432 2346788999999999999999999998654 368
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
++||||++ ++|.+++... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+....
T Consensus 106 ~iv~e~~~-~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEcccC-cCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 99999996 5999988753 4899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCCC--cccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 813 DCESH--VSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 813 ~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
..... ......+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||.....
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 237 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSG
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCCh
Confidence 43222 1234578999999998654 5589999999999999999999999976543
No 246
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.97 E-value=8.8e-31 Score=293.53 Aligned_cols=204 Identities=27% Similarity=0.306 Sum_probs=172.0
Q ss_pred eeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccC--------CCCccceeeeeE-
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVK--------HQNLVQLLGYCS- 727 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~--------~~~i~~~~~~~~- 727 (885)
.+.++|++.++||+|+||.||+|++. +++.||+|++.... ...+.+.+|+++++.++ ||||+++++++.
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~ 112 (397)
T 1wak_A 34 LFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI 112 (397)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred hcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence 34578999999999999999999865 58889999987542 23467889999999986 778999999887
Q ss_pred ---eCCeeEEEEecccCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHhccCCC-CceecCCCCCcEEEcCCC----
Q 047790 728 ---VGEEKLLVYEYMVNGSLDDWLRN-RAASLDWGKRCKIAYGAARGISFLHHGFKP-YIIHMDIKTSNILLNDYF---- 798 (885)
Q Consensus 728 ---~~~~~~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~-~i~H~dlkp~Nil~~~~~---- 798 (885)
.....++||||+ ++++.+.+.. ....+++..++.++.|++.|++||| ++ ||+||||||+||+++.++
T Consensus 113 ~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~ 188 (397)
T 1wak_A 113 SGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIR 188 (397)
T ss_dssp EETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHH
T ss_pred cCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhh
Confidence 456789999999 5566666554 3356999999999999999999999 87 999999999999998765
Q ss_pred ---------------------------------------------cEEEeeccCcccccCCCCCcccCCCCCCccCCccc
Q 047790 799 ---------------------------------------------EAKVSDFGLARLISDCESHVSTDTADTIGYVPSEY 833 (885)
Q Consensus 799 ---------------------------------------------~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~ 833 (885)
.+||+|||.+...... .....+|..|+|||+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 189 RLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHH
T ss_pred hhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChh
Confidence 7999999999876432 234568999999999
Q ss_pred ccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCC
Q 047790 834 GQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870 (885)
Q Consensus 834 ~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~~~~ 870 (885)
+.+..++.++||||+||++|||++|+.||.+....+.
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~ 301 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEY 301 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSS
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCccccc
Confidence 9999999999999999999999999999987655443
No 247
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=4.9e-30 Score=280.65 Aligned_cols=191 Identities=28% Similarity=0.449 Sum_probs=160.1
Q ss_pred eeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcc--cCCCCccceeeeeEeC----Cee
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDM--VKHQNLVQLLGYCSVG----EEK 732 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~--l~~~~i~~~~~~~~~~----~~~ 732 (885)
+..+|++.++||+|+||.||+|++. ++.||+|++.... ......|.+++.. ++||||+++++++... ...
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 110 (337)
T 3mdy_A 35 IAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL 110 (337)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEE
T ss_pred cccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCce
Confidence 3467999999999999999999875 8899999986433 3444455555554 4899999999999876 688
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCC--------CceecCCCCCcEEEcCCCcEEEee
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP--------YIIHMDIKTSNILLNDYFEAKVSD 804 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~--------~i~H~dlkp~Nil~~~~~~vkl~D 804 (885)
++||||+++++|.++++.. .+++..+..++.|++.|++||| +. ||+||||||+||+++.++.+||+|
T Consensus 111 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~D 185 (337)
T 3mdy_A 111 YLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIAD 185 (337)
T ss_dssp EEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred EEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCEEEEe
Confidence 9999999999999999754 4899999999999999999999 77 999999999999999999999999
Q ss_pred ccCcccccCCCCCc---ccCCCCCCccCCcccccCCCCCCc------chhHHHHHHHHHHHhC
Q 047790 805 FGLARLISDCESHV---STDTADTIGYVPSEYGQAGRANER------GDIYSFGVILLELVTG 858 (885)
Q Consensus 805 fg~a~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~------~DvwslGvvl~elltg 858 (885)
||.+..+....... .....+|+.|+|||++.+.....+ +|||||||++|||++|
T Consensus 186 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg 248 (337)
T 3mdy_A 186 LGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARR 248 (337)
T ss_dssp CTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhc
Confidence 99997765432221 124578999999999988776665 9999999999999999
No 248
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=8e-31 Score=288.64 Aligned_cols=288 Identities=20% Similarity=0.202 Sum_probs=148.4
Q ss_pred CCCCCCCCcccCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCC
Q 047790 46 GWNKTTRHCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLS 125 (885)
Q Consensus 46 ~w~~~~~~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 125 (885)
.|.....+|.|.|+ |+. ++++++ .+|..+. ++|++|+|++|.+++..+..|+++++|++|+|++|+++
T Consensus 22 ~~~~~~~~C~~~~~-c~~--------~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~ 89 (353)
T 2z80_A 22 SSNQASLSCDRNGI-CKG--------SSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGIN 89 (353)
T ss_dssp -----CCEECTTSE-EEC--------CSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCC
T ss_pred CCCccCCCCCCCeE-eeC--------CCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccC
Confidence 35556788999988 743 233333 3454443 36666777766666555556666666666666666666
Q ss_pred CCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCC-cccCCCCCCccccccccc-cCCCCCcc
Q 047790 126 GSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIP-SRLGDLTQLQDLDLSDNL-LSGSLPVS 203 (885)
Q Consensus 126 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~-l~~~~p~~ 203 (885)
+..|..|+.+++|++|+|++|++++..+..|+.+++|++|+|++|++++..+ ..|.++++|++|++++|. +. .++..
T Consensus 90 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~-~~~~~ 168 (353)
T 2z80_A 90 TIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFT-KIQRK 168 (353)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCC-EECTT
T ss_pred ccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCcccc-ccCHH
Confidence 5555556666666666666666664333345556666666666666553222 245555555555555553 32 33333
Q ss_pred cccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCccccccccccc
Q 047790 204 LLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELC 283 (885)
Q Consensus 204 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~ 283 (885)
.+.++++|++|++++|++ ++..|..+.
T Consensus 169 ~~~~l~~L~~L~l~~n~l-----------------------------------------------------~~~~~~~l~ 195 (353)
T 2z80_A 169 DFAGLTFLEELEIDASDL-----------------------------------------------------QSYEPKSLK 195 (353)
T ss_dssp TTTTCCEEEEEEEEETTC-----------------------------------------------------CEECTTTTT
T ss_pred HccCCCCCCEEECCCCCc-----------------------------------------------------CccCHHHHh
Confidence 344444444444444444 444444444
Q ss_pred CCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCC----CCceeEEeecCccccccCccccCcccc
Q 047790 284 NSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISE----LPLKVFDLQYNNFTGVIPVSLWNSENL 359 (885)
Q Consensus 284 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~----~~L~~L~Ls~N~l~~~~p~~~~~l~~L 359 (885)
.+++|++|++++|.++..++..+..+++|++|++++|++++..+..+.. ..++.++++++.+++.
T Consensus 196 ~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~----------- 264 (353)
T 2z80_A 196 SIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDE----------- 264 (353)
T ss_dssp TCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHH-----------
T ss_pred ccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCc-----------
Confidence 4445555555555554444444445566666666666665544333221 1355555555555431
Q ss_pred ceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccC
Q 047790 360 MEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDG 419 (885)
Q Consensus 360 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 419 (885)
.+. .+|..+..+++|++|+|++|+++...+..|..+++|++|+|++|.+++
T Consensus 265 --------~l~-~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~ 315 (353)
T 2z80_A 265 --------SLF-QVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 315 (353)
T ss_dssp --------HHH-HHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred --------chh-hhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccC
Confidence 111 123334455555555555555553322234555555555555555554
No 249
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.97 E-value=3.1e-30 Score=276.97 Aligned_cols=200 Identities=27% Similarity=0.343 Sum_probs=174.1
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc---------ccHHHHHHHHHHhcccC-CCCccceeeeeE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG---------QCDREFAAEMETLDMVK-HQNLVQLLGYCS 727 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~---------~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~ 727 (885)
...+|++.+.||+|+||.||+|.+. +++.||+|++..... ...+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3467999999999999999999875 588999999865421 12356789999999996 999999999999
Q ss_pred eCCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccC
Q 047790 728 VGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGL 807 (885)
Q Consensus 728 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~ 807 (885)
.+...++||||+++++|.+++..+. .+++..+..++.|++.|++||| +.|++||||||+||+++.++.++|+|||.
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred cCCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecccc
Confidence 9999999999999999999998653 4899999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCCCCcccCCCCCCccCCccccc------CCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQ------AGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
+....... ......++..|+|||++. ...++.++||||+|+++|+|++|+.||..
T Consensus 171 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 231 (298)
T 1phk_A 171 SCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231 (298)
T ss_dssp CEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred hhhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcC
Confidence 98765422 223456899999999875 45688999999999999999999999864
No 250
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.97 E-value=2.5e-30 Score=293.95 Aligned_cols=203 Identities=22% Similarity=0.302 Sum_probs=173.8
Q ss_pred eeeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhcccCC-CCccceeeeeEeCCeeEEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKH-QNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~ 736 (885)
+..+|++.++||+|+||.||+|++ .+++.||+|++..... ..++..|+++++.++| +++..+..++...+..++||
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm 82 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM 82 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence 446799999999999999999986 4588999998765432 2457889999999987 55666666777788899999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE---cCCCcEEEeeccCcccccC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL---NDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~---~~~~~vkl~Dfg~a~~~~~ 813 (885)
||+ +++|.+++......+++..+..++.|++.|++||| +.+|+||||||+||++ +..+.+||+|||+++.+..
T Consensus 83 e~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred ECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 999 99999999876667999999999999999999999 8999999999999999 5788999999999988765
Q ss_pred CCCC------cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 814 CESH------VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 814 ~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
.... ......+|..|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~ 218 (483)
T 3sv0_A 159 TSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA 218 (483)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC
T ss_pred CccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccc
Confidence 3321 12245689999999999999999999999999999999999999976443
No 251
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.97 E-value=1.3e-30 Score=293.22 Aligned_cols=197 Identities=24% Similarity=0.268 Sum_probs=164.5
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeC------Ce
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVG------EE 731 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~------~~ 731 (885)
....|++.++||+|+||.||+|++. +++.||+|++.... ....+|+++++.++||||+++++++... .+
T Consensus 52 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~ 127 (420)
T 1j1b_A 52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127 (420)
T ss_dssp EEEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred ccceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence 4557999999999999999999875 48999999986543 2234799999999999999999987432 24
Q ss_pred eEEEEecccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCC-CcEEEeeccC
Q 047790 732 KLLVYEYMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY-FEAKVSDFGL 807 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~-~~vkl~Dfg~ 807 (885)
.++||||+++ ++.+.+.. ....+++..++.++.|++.|++||| +.||+||||||+||+++.+ +.+||+|||+
T Consensus 128 ~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 128 LNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchh
Confidence 6799999975 66665542 3456999999999999999999999 9999999999999999954 6789999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
++.+..... .....+|+.|+|||++.+. .++.++||||+||++|||++|+.||.+.
T Consensus 204 a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~ 260 (420)
T 1j1b_A 204 AKQLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 260 (420)
T ss_dssp CEECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred hhhcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 987654222 2345789999999998765 7899999999999999999999999754
No 252
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.97 E-value=7.8e-31 Score=289.31 Aligned_cols=199 Identities=29% Similarity=0.337 Sum_probs=155.5
Q ss_pred eeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeC----
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVG---- 729 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~---- 729 (885)
+-+..+|++.+.||+|+||.||+|.+. +++.||+|++.... .....++.+|+++++.++||||+++++++...
T Consensus 25 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 104 (367)
T 2fst_X 25 WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE 104 (367)
T ss_dssp EEEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGG
T ss_pred cCCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccc
Confidence 445678999999999999999999864 58899999986543 22346788999999999999999999998653
Q ss_pred --CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccC
Q 047790 730 --EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGL 807 (885)
Q Consensus 730 --~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~ 807 (885)
...++|||++ +++|.+++.. ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.
T Consensus 105 ~~~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 105 EFNDVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp GCCCCEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC---
T ss_pred cCCeEEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 5679999999 7899998875 45899999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
++..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.
T Consensus 179 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 233 (367)
T 2fst_X 179 ARHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9775432 234568999999999887 67899999999999999999999999754
No 253
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.97 E-value=1.4e-30 Score=283.27 Aligned_cols=200 Identities=23% Similarity=0.350 Sum_probs=170.8
Q ss_pred eEEeec-ceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeEEE
Q 047790 661 AIIVFE-NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 661 ~~~~~~-~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~lv 735 (885)
.+|.+. +.||+|+||.||+|.+. +++.||+|++.... ......+.+|+++++.+. ||+|+++++++..++..++|
T Consensus 28 ~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv 107 (327)
T 3lm5_A 28 NFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILI 107 (327)
T ss_dssp HHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEE
Confidence 457776 89999999999999876 58999999987543 234578889999999995 69999999999999999999
Q ss_pred EecccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC---CCcEEEeeccCcccc
Q 047790 736 YEYMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND---YFEAKVSDFGLARLI 811 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~---~~~vkl~Dfg~a~~~ 811 (885)
|||+++++|.+++... ...+++..+..++.|++.|++||| +.||+||||||+||+++. .+.+||+|||.+...
T Consensus 108 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~ 184 (327)
T 3lm5_A 108 LEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI 184 (327)
T ss_dssp EECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC
T ss_pred EEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEeeCcccccc
Confidence 9999999999988642 355899999999999999999999 899999999999999987 789999999999876
Q ss_pred cCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.... ......+++.|+|||++.+..++.++||||+|+++|+|++|+.||...
T Consensus 185 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 236 (327)
T 3lm5_A 185 GHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGE 236 (327)
T ss_dssp -----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 5422 223457899999999999999999999999999999999999999643
No 254
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.97 E-value=1.2e-30 Score=279.14 Aligned_cols=199 Identities=26% Similarity=0.435 Sum_probs=168.1
Q ss_pred eEEeecc-eecccCCceEEEEEeC---CCCeEEEEEecccccc--cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 661 AIIVFEN-VIGGGGFRTAFKGTMP---DQKTVAVKKLSQATGQ--CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 661 ~~~~~~~-~lG~G~~g~vy~a~~~---~~~~valK~~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
.+|++.+ .||+|+||.||+|.+. .++.||+|++...... ..+.+.+|++++++++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 4688888 9999999999999542 3678999999764322 246789999999999999999999999 5677899
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+......
T Consensus 95 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 170 (291)
T ss_dssp EEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred EEEeCCCCCHHHHHHhC-cCCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccC
Confidence 99999999999999864 34899999999999999999999 899999999999999999999999999999876543
Q ss_pred CCCc--ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 815 ESHV--STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 815 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.... .....++..|+|||++.+..++.++||||+|+++|+|++ |+.||..
T Consensus 171 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 223 (291)
T 1xbb_A 171 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 223 (291)
T ss_dssp CSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred CCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCC
Confidence 3221 122345688999999998889999999999999999999 9999975
No 255
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.97 E-value=1.7e-30 Score=277.75 Aligned_cols=200 Identities=22% Similarity=0.269 Sum_probs=157.4
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc-c-HHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ-C-DREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~-~-~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
...+|++.+.||+|+||.||+|++. +++.||+|++...... . .+.+.++...++.++||||+++++++.+++..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 3467999999999999999999874 6889999999754322 1 23344555557888999999999999999999999
Q ss_pred EecccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCC-CceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 736 YEYMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKP-YIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~-~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
|||+++ ++.+++.. ....+++..+..++.|++.|++||| +. ||+||||||+||+++.++.+||+|||.+...
T Consensus 85 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 85 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred Eehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 999964 88777653 4556999999999999999999999 77 9999999999999999999999999999876
Q ss_pred cCCCCCcccCCCCCCccCCcccc----cCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYG----QAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.... ......+++.|+|||++ .+..++.++||||+|+++|+|++|+.||..
T Consensus 161 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 215 (290)
T 3fme_A 161 VDDV--AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 215 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred cccc--cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccc
Confidence 5422 22334689999999996 556788999999999999999999999964
No 256
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.97 E-value=2.9e-30 Score=278.18 Aligned_cols=202 Identities=22% Similarity=0.327 Sum_probs=168.8
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc----cccHHHHHHHHHHhcccCCCCccceeeeeE--eCCe
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT----GQCDREFAAEMETLDMVKHQNLVQLLGYCS--VGEE 731 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~--~~~~ 731 (885)
+.++|++.+.||+|+||.||+|.+. +++.||+|++.... ......+.+|++++++++||||+++++++. +...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 3467999999999999999999875 58899999997543 233567899999999999999999999984 4567
Q ss_pred eEEEEecccCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 732 KLLVYEYMVNGSLDDWLRN-RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
.++||||++++ +.+++.. ....+++..+..++.|++.|++||| +.||+||||||+||+++.++.++++|||.+..
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 89999999776 7776664 3456899999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCC-CCcccCCCCCCccCCcccccCCCC--CCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 811 ISDCE-SHVSTDTADTIGYVPSEYGQAGRA--NERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 811 ~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~--~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
..... ........++..|+|||+..+... +.++||||+|+++|+|++|+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 215 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG 215 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCC
Confidence 65322 222334568999999999887543 7799999999999999999999975
No 257
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.97 E-value=8.1e-31 Score=286.73 Aligned_cols=198 Identities=28% Similarity=0.484 Sum_probs=161.3
Q ss_pred eeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHH--HHHHHhcccCCCCccceeeeeEe-----CCe
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFA--AEMETLDMVKHQNLVQLLGYCSV-----GEE 731 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~--~E~~~l~~l~~~~i~~~~~~~~~-----~~~ 731 (885)
...+|++.+.||+|+||.||+|+. +++.||+|++.... ...+. .|+..+..++||||+++++.+.. ...
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 456799999999999999999976 67899999986543 23333 44444556899999999985532 235
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCC---------CceecCCCCCcEEEcCCCcEEE
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP---------YIIHMDIKTSNILLNDYFEAKV 802 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~---------~i~H~dlkp~Nil~~~~~~vkl 802 (885)
.++||||+++++|.+++.... .++..+..++.|++.|++||| +. ||+||||||+||+++.++.+||
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEE
Confidence 789999999999999997644 588899999999999999999 88 9999999999999999999999
Q ss_pred eeccCcccccCCC-------CCcccCCCCCCccCCcccccC-------CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 803 SDFGLARLISDCE-------SHVSTDTADTIGYVPSEYGQA-------GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 803 ~Dfg~a~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+|||.+..+.... ........+|..|+|||++.+ ..++.++|||||||++|||++|..||...
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~ 238 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPG 238 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTT
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCc
Confidence 9999998765321 112224468999999999887 35567899999999999999998877543
No 258
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.97 E-value=1.7e-30 Score=291.56 Aligned_cols=199 Identities=23% Similarity=0.333 Sum_probs=155.5
Q ss_pred EEee-cceecccCCceEEEEEeC---CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEe--CCeeEEE
Q 047790 662 IIVF-ENVIGGGGFRTAFKGTMP---DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV--GEEKLLV 735 (885)
Q Consensus 662 ~~~~-~~~lG~G~~g~vy~a~~~---~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~--~~~~~lv 735 (885)
.|++ +++||+|+||.||+|++. +++.||+|++.... ....+.+|++++++++||||+++++++.. +...++|
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv 98 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 98 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence 4676 568999999999999865 47889999987543 24578899999999999999999999954 6788999
Q ss_pred EecccCCCHHHHHhhc--------CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE----cCCCcEEEe
Q 047790 736 YEYMVNGSLDDWLRNR--------AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL----NDYFEAKVS 803 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~--------~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~----~~~~~vkl~ 803 (885)
|||++ +++.+++... ...+++..++.++.|++.|++||| +.||+||||||+||++ +..+.+||+
T Consensus 99 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~ 174 (405)
T 3rgf_A 99 FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIA 174 (405)
T ss_dssp EECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred EeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEEE
Confidence 99995 5888877531 124899999999999999999999 8999999999999999 677899999
Q ss_pred eccCcccccCCCC--CcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 804 DFGLARLISDCES--HVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 804 Dfg~a~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
|||.|+.+..... .......+|+.|+|||++.+. .++.++||||+||++|+|++|+.||....
T Consensus 175 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 240 (405)
T 3rgf_A 175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240 (405)
T ss_dssp CTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred ECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence 9999987654221 222345689999999998874 58999999999999999999999997544
No 259
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.97 E-value=6.8e-31 Score=282.79 Aligned_cols=203 Identities=25% Similarity=0.375 Sum_probs=157.5
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
...+|++.+.||+|+||.||+|.+. +++.||+|++.... .....++.+|++++++++||||+++++++..++..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 3467999999999999999999865 58899999986543 233467889999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhh-------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcc
Q 047790 737 EYMVNGSLDDWLRN-------RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLAR 809 (885)
Q Consensus 737 e~~~~~sL~~~l~~-------~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~ 809 (885)
||+++++|.+++.. ....+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+.
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 99999999999874 2345899999999999999999999 8999999999999999999999999999987
Q ss_pred cccCCCC----CcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 810 LISDCES----HVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 810 ~~~~~~~----~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
....... .......+++.|+|||++.+ ..++.++||||+|+++|+|++|+.||..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 229 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 229 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence 6643211 11233468999999999876 5689999999999999999999999975
No 260
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.97 E-value=1.4e-30 Score=306.07 Aligned_cols=196 Identities=24% Similarity=0.418 Sum_probs=166.2
Q ss_pred cceecccCCceEEEEEeC---CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccC
Q 047790 666 ENVIGGGGFRTAFKGTMP---DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 666 ~~~lG~G~~g~vy~a~~~---~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
...||+|+||.||+|.+. ++..||+|+++... ....+++.+|++++++++||||+++++++.. +..++||||+++
T Consensus 341 ~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~ 419 (613)
T 2ozo_A 341 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGG 419 (613)
T ss_dssp EEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCC
Confidence 338999999999999764 45679999997643 3356789999999999999999999999875 568999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc--
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS-- 819 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~-- 819 (885)
|+|.+++......+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++.+........
T Consensus 420 g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 496 (613)
T 2ozo_A 420 GPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 496 (613)
T ss_dssp CBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC---------
T ss_pred CcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeec
Confidence 9999999876667999999999999999999999 89999999999999999999999999999987654322221
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
....++..|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 497 ~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~ 543 (613)
T 2ozo_A 497 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 543 (613)
T ss_dssp -----CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred cCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 12234678999999999999999999999999999998 99999754
No 261
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.97 E-value=1.7e-30 Score=276.01 Aligned_cols=197 Identities=28% Similarity=0.439 Sum_probs=164.4
Q ss_pred eeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeC-CeeEEEEe
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVG-EEKLLVYE 737 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~-~~~~lv~e 737 (885)
....|++.+.||+|+||.||+|++. ++.||+|++.... ..+.+.+|++++++++||||+++++++... +..++|||
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 95 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred ChhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence 4567999999999999999999874 7889999987543 456789999999999999999999986544 57899999
Q ss_pred cccCCCHHHHHhhcCC-CCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 738 YMVNGSLDDWLRNRAA-SLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~-~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
|+++++|.+++..... .+++..+..++.|++.|++||| +.|++||||||+||+++.++.++|+|||.+......
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-- 170 (278)
T 1byg_A 96 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 170 (278)
T ss_dssp CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred cCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccccccccc--
Confidence 9999999999975432 2788999999999999999999 899999999999999999999999999998765432
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.....++..|+|||++.+..++.++||||+|+++|+|++ |+.||...
T Consensus 171 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 218 (278)
T 1byg_A 171 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI 218 (278)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS
T ss_pred --ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCC
Confidence 122356788999999999999999999999999999998 99998753
No 262
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.97 E-value=3e-30 Score=280.94 Aligned_cols=200 Identities=24% Similarity=0.381 Sum_probs=166.2
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhccc-CCCCccceeeeeEe------CCe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMV-KHQNLVQLLGYCSV------GEE 731 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~------~~~ 731 (885)
.++|++.+.||+|+||.||+|++. +++.||+|++.... .....+.+|+++++++ +||||+++++++.. ...
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~ 101 (326)
T 2x7f_A 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 101 (326)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccce
Confidence 456999999999999999999874 68899999986543 3357888999999999 79999999999876 467
Q ss_pred eEEEEecccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
.++||||+++++|.+++... ...+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+..
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 178 (326)
T 2x7f_A 102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 178 (326)
T ss_dssp EEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCTTTC-
T ss_pred EEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEeeCcCcee
Confidence 89999999999999999853 345899999999999999999999 89999999999999999999999999999877
Q ss_pred ccCCCCCcccCCCCCCccCCccccc-----CCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 811 ISDCESHVSTDTADTIGYVPSEYGQ-----AGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 811 ~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
..... .......++..|+|||++. +..++.++||||+||++|+|++|+.||..
T Consensus 179 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 236 (326)
T 2x7f_A 179 LDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD 236 (326)
T ss_dssp -------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cCcCc-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 64321 1223446899999999987 56788999999999999999999999964
No 263
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.97 E-value=7.4e-31 Score=284.37 Aligned_cols=203 Identities=27% Similarity=0.414 Sum_probs=173.2
Q ss_pred eeEEeecceecccCCceEEEEEe------CCCCeEEEEEecccccc-cHHHHHHHHHHhccc-CCCCccceeeeeEeCC-
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTM------PDQKTVAVKKLSQATGQ-CDREFAAEMETLDMV-KHQNLVQLLGYCSVGE- 730 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~------~~~~~valK~~~~~~~~-~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~- 730 (885)
..+|++.+.||+|+||.||+|++ .+++.||+|++...... ..+.+.+|+++++++ +||||+++++++...+
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 105 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 105 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence 45799999999999999999974 34678999999764432 345788999999999 6899999999987654
Q ss_pred eeEEEEecccCCCHHHHHhhcCCC---------------CCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAAS---------------LDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN 795 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~---------------~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~ 795 (885)
..++||||+++++|.+++...... +++..+..++.|++.|++||| +.||+||||||+||+++
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~ 182 (316)
T 2xir_A 106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLS 182 (316)
T ss_dssp CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEC
T ss_pred ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEEC
Confidence 589999999999999999864432 789999999999999999999 89999999999999999
Q ss_pred CCCcEEEeeccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 796 DYFEAKVSDFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 796 ~~~~vkl~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.++.+||+|||.+......... ......+++.|+|||++.+..++.++||||+|+++|+|++ |+.||...
T Consensus 183 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 254 (316)
T 2xir_A 183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254 (316)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence 9999999999999876543222 2233456789999999999999999999999999999998 99999754
No 264
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.97 E-value=2.1e-30 Score=283.82 Aligned_cols=201 Identities=22% Similarity=0.325 Sum_probs=169.5
Q ss_pred eeeeEEeecceecccCCceEEEEEe-CCCCeEEEEEeccccc-ccHHHHHHHHHH-hcccCCCCccceeeeeEeCCeeEE
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATG-QCDREFAAEMET-LDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~-~~~~~~~~E~~~-l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
+...+|++.+.||+|+||.||+|++ .+++.||+|++..... ....++..|..+ ++.++||||+++++++..++..++
T Consensus 48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l 127 (340)
T 3an0_A 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127 (340)
T ss_dssp CCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred EehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence 3456799999999999999999986 4688999999975432 233455556665 778899999999999999999999
Q ss_pred EEecccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCC-CceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 735 VYEYMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKP-YIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~-~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
||||+++ +|.+++.. ....+++..+..++.|++.|++||| +. ||+||||||+||+++.++.+||+|||.+..
T Consensus 128 v~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 203 (340)
T 3an0_A 128 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGY 203 (340)
T ss_dssp EECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHH
T ss_pred EHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCcee
Confidence 9999975 99888764 4556999999999999999999999 76 999999999999999999999999999877
Q ss_pred ccCCCCCcccCCCCCCccCCccccc----CCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 811 ISDCESHVSTDTADTIGYVPSEYGQ----AGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 811 ~~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.... .......++..|+|||++. ...++.++||||+||++|||++|+.||..
T Consensus 204 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~ 259 (340)
T 3an0_A 204 LVDS--VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 259 (340)
T ss_dssp HSCH--HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred cccc--cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCcc
Confidence 6432 1222346899999999964 34788999999999999999999999974
No 265
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.97 E-value=3.2e-30 Score=280.09 Aligned_cols=200 Identities=23% Similarity=0.315 Sum_probs=167.3
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--------ccHHHHHHHHHHhcccCCCCccceeeeeEeCC
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--------QCDREFAAEMETLDMVKHQNLVQLLGYCSVGE 730 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--------~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 730 (885)
..+|++.+.||+|+||.||+|.+. +++.||+|++..... .....+.+|++++++++||||+++++++..+.
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 357999999999999999999875 478899999865321 12235789999999999999999999987654
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc---EEEeeccC
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE---AKVSDFGL 807 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~---vkl~Dfg~ 807 (885)
.++||||+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++. +||+|||.
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTT-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred -eEEEEecCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 89999999999999988754 45899999999999999999999 899999999999999986654 99999999
Q ss_pred cccccCCCCCcccCCCCCCccCCccccc---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQ---AGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
+...... .......+++.|+|||++. ...++.++||||+||++|+|++|+.||....
T Consensus 164 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 223 (322)
T 2ycf_A 164 SKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223 (322)
T ss_dssp CEECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTT
T ss_pred ceecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence 9876432 1122345899999999863 5678899999999999999999999997543
No 266
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.97 E-value=4e-30 Score=284.83 Aligned_cols=199 Identities=25% Similarity=0.332 Sum_probs=168.5
Q ss_pred ceeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc--cHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 656 SVLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ--CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 656 ~~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
.+-+..+|++.+.||+|+||.||+|.+. +++.||+|++...... ...++.+|+++++.++||||+++++++...+..
T Consensus 37 ~~~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 116 (371)
T 4exu_A 37 AWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSL 116 (371)
T ss_dssp EEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSS
T ss_pred eecccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCc
Confidence 3556678999999999999999999865 5889999999764322 246788999999999999999999999876554
Q ss_pred ------EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeecc
Q 047790 733 ------LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFG 806 (885)
Q Consensus 733 ------~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg 806 (885)
++||||+. ++|.+++. ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||
T Consensus 117 ~~~~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg 189 (371)
T 4exu_A 117 RNFYDFYLVMPFMQ-TDLQKIMG---MEFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFG 189 (371)
T ss_dssp TTCCCCEEEEECCC-EEHHHHTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred ccceeEEEEEcccc-ccHHHHhh---cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecC
Confidence 99999996 58888774 33899999999999999999999 8999999999999999999999999999
Q ss_pred CcccccCCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 807 LARLISDCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 807 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.+...... .....+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||...
T Consensus 190 ~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 245 (371)
T 4exu_A 190 LARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 245 (371)
T ss_dssp CC------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence 99865432 233567999999999887 67899999999999999999999999754
No 267
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.97 E-value=2.7e-30 Score=279.51 Aligned_cols=203 Identities=22% Similarity=0.401 Sum_probs=162.0
Q ss_pred eeEEeecceecccCCceEEEEEeCC----CCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCC---
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD----QKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGE--- 730 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~----~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~--- 730 (885)
..+|.+.+.||+|+||.||+|.... ++.||+|++..... ...+.+.+|++++++++||||+++++++....
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 112 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG 112 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence 3569999999999999999997542 44799999875432 23457889999999999999999999987654
Q ss_pred --eeEEEEecccCCCHHHHHhh-----cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEe
Q 047790 731 --EKLLVYEYMVNGSLDDWLRN-----RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVS 803 (885)
Q Consensus 731 --~~~lv~e~~~~~sL~~~l~~-----~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~ 803 (885)
..++||||+++++|.+++.. ....+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+
T Consensus 113 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kl~ 189 (313)
T 3brb_A 113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVA 189 (313)
T ss_dssp --CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEEEC
T ss_pred CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEEe
Confidence 34999999999999999852 3355899999999999999999999 9999999999999999999999999
Q ss_pred eccCcccccCCCC-CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 804 DFGLARLISDCES-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 804 Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
|||.+..+..... .......+++.|+|||++.+..++.++||||||+++|+|++ |..||...
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 253 (313)
T 3brb_A 190 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGV 253 (313)
T ss_dssp SCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccC
Confidence 9999987654322 12233456788999999999999999999999999999999 88898653
No 268
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.97 E-value=2.6e-30 Score=280.58 Aligned_cols=204 Identities=24% Similarity=0.323 Sum_probs=166.2
Q ss_pred eeeeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeE--------
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCS-------- 727 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-------- 727 (885)
..+..+|++.+.||+|+||.||+|.+.. ++.||+|++........+++.+|++++++++||||+++++++.
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 86 (320)
T 2i6l_A 7 FDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD 86 (320)
T ss_dssp EEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC
T ss_pred CccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccc
Confidence 3445689999999999999999998765 8899999987665555678899999999999999999999873
Q ss_pred ------eCCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc-CCCcE
Q 047790 728 ------VGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN-DYFEA 800 (885)
Q Consensus 728 ------~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~-~~~~v 800 (885)
+....++||||++ ++|.+++.. ..+++..+..++.|++.|++||| +.||+||||||+||+++ +++.+
T Consensus 87 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~ 160 (320)
T 2i6l_A 87 DVGSLTELNSVYIVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVL 160 (320)
T ss_dssp ----CCSCSEEEEEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEE
T ss_pred ccccccccCceeEEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeE
Confidence 3467899999997 599999874 34899999999999999999999 89999999999999997 56789
Q ss_pred EEeeccCcccccCCCC--CcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 801 KVSDFGLARLISDCES--HVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 801 kl~Dfg~a~~~~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
||+|||.+........ .......++..|+|||++.+ ..++.++||||+|+++|||++|+.||....
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 229 (320)
T 2i6l_A 161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH 229 (320)
T ss_dssp EECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred EEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCC
Confidence 9999999987643211 12233456889999998765 678999999999999999999999997543
No 269
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.97 E-value=1.2e-30 Score=279.03 Aligned_cols=202 Identities=26% Similarity=0.381 Sum_probs=164.2
Q ss_pred eeeEEeecceecccCCceEEEEEeC--CCC--eEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCe
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP--DQK--TVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEE 731 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~--~~~--~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 731 (885)
...+|++.+.||+|+||.||+|++. +++ .||+|+++... ....+.+.+|++++++++||||+++++++..+.
T Consensus 16 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 94 (291)
T 1u46_A 16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP- 94 (291)
T ss_dssp CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred chhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-
Confidence 3467999999999999999999853 233 58999887542 233467889999999999999999999998654
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
.++||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+...
T Consensus 95 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 95 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEccccccccc
Confidence 88999999999999999876566899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCCC--cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 812 SDCESH--VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 812 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
...... ......++..|+|||+..+..++.++||||+|+++|+|++ |+.||..
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 227 (291)
T 1u46_A 172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 227 (291)
T ss_dssp CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 543222 2223456778999999998889999999999999999999 9999964
No 270
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.97 E-value=1.4e-30 Score=284.40 Aligned_cols=202 Identities=27% Similarity=0.435 Sum_probs=173.5
Q ss_pred eEEeecceecccCCceEEEEEeCC------CCeEEEEEeccccc-ccHHHHHHHHHHhccc-CCCCccceeeeeEeCCee
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD------QKTVAVKKLSQATG-QCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~------~~~valK~~~~~~~-~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~ 732 (885)
..|++.+.||+|+||.||+|.+.. .+.||+|.+..... ...+.+.+|+++++++ +||||+++++++..++..
T Consensus 46 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 125 (333)
T 2i1m_A 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV 125 (333)
T ss_dssp TSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCce
Confidence 469999999999999999998643 24799999876432 3346788999999999 899999999999999999
Q ss_pred EEEEecccCCCHHHHHhhc-------------CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc
Q 047790 733 LLVYEYMVNGSLDDWLRNR-------------AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE 799 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~-------------~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~ 799 (885)
++||||+++++|.+++... ...+++..+..++.|++.|++||| +.||+||||||+||+++.++.
T Consensus 126 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~ 202 (333)
T 2i1m_A 126 LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHV 202 (333)
T ss_dssp EEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEEGGGE
T ss_pred EEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEECCCCe
Confidence 9999999999999998753 234799999999999999999999 899999999999999999999
Q ss_pred EEEeeccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 800 AKVSDFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 800 vkl~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
+||+|||.+......... ......++..|+|||++.+..++.++||||+|+++|+|++ |..||...
T Consensus 203 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 270 (333)
T 2i1m_A 203 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 270 (333)
T ss_dssp EEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred EEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCccc
Confidence 999999999876443222 2233446788999999999999999999999999999999 99998754
No 271
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.97 E-value=6.4e-30 Score=276.53 Aligned_cols=201 Identities=24% Similarity=0.363 Sum_probs=167.4
Q ss_pred eeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccc--cccHHHHHHHHHHhcccC--CCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQAT--GQCDREFAAEMETLDMVK--HQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~--~~~i~~~~~~~~~~~~~~l 734 (885)
...+|++.+.||+|+||.||+|.+.+++.||+|++.... ......+.+|++++++++ ||||+++++++..++..++
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 346799999999999999999999889999999986543 223467889999999997 5999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||| +.+++|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||++++ +.+||+|||.+..+...
T Consensus 106 v~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~ 179 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPD 179 (313)
T ss_dssp EEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC----
T ss_pred EEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeeccccccccCc
Confidence 999 55889999998643 5899999999999999999999 899999999999999975 78999999999876543
Q ss_pred CCC-cccCCCCCCccCCcccccC-----------CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 815 ESH-VSTDTADTIGYVPSEYGQA-----------GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 815 ~~~-~~~~~~~~~~y~aPE~~~~-----------~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
... ......+++.|+|||++.+ ..++.++||||+|+++|+|++|+.||...
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 242 (313)
T 3cek_A 180 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 242 (313)
T ss_dssp ----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred cccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhH
Confidence 221 2234568999999999876 46788999999999999999999999753
No 272
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.97 E-value=5.1e-30 Score=280.60 Aligned_cols=199 Identities=23% Similarity=0.316 Sum_probs=172.4
Q ss_pred eeeeEEeecceecccCCceEEEEEe--CCCCeEEEEEecccccccHHHHHHHHHHhcccCCC------CccceeeeeEeC
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTM--PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQ------NLVQLLGYCSVG 729 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~--~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~------~i~~~~~~~~~~ 729 (885)
++..+|++.+.||+|+||.||+|.+ .+++.||+|++.... ...+.+.+|+++++.++|+ +++++++++...
T Consensus 11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~ 89 (339)
T 1z57_A 11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH 89 (339)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred CccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC
Confidence 4456899999999999999999986 358889999986543 2346788899999988765 499999999999
Q ss_pred CeeEEEEecccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC------------
Q 047790 730 EEKLLVYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND------------ 796 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~------------ 796 (885)
+..++||||+ ++++.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++.
T Consensus 90 ~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~ 165 (339)
T 1z57_A 90 GHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIK 165 (339)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----
T ss_pred CcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCccc
Confidence 9999999999 889999987643 35889999999999999999999 899999999999999987
Q ss_pred -------CCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 797 -------YFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 797 -------~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
++.+||+|||.+..... ......+|+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 166 ~~~~~~~~~~~kl~Dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 237 (339)
T 1z57_A 166 RDERTLINPDIKVVDFGSATYDDE----HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTH 237 (339)
T ss_dssp CEEEEESCCCEEECCCSSCEETTS----CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccCCCceEeeCcccccCcc----ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 56799999999976443 223456899999999999999999999999999999999999999754
No 273
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.97 E-value=2e-30 Score=282.30 Aligned_cols=205 Identities=28% Similarity=0.406 Sum_probs=170.4
Q ss_pred eeeeEEeecceecccCCceEEEEEe------CCCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCC
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTM------PDQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE 730 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~------~~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 730 (885)
+...+|++.+.||+|+||.||+|++ .+++.||+|++.... .....++.+|++++++++||||+++++++..+.
T Consensus 27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 106 (327)
T 2yfx_A 27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 106 (327)
T ss_dssp CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence 3456799999999999999999984 247789999997543 234567889999999999999999999999988
Q ss_pred eeEEEEecccCCCHHHHHhhcC------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC---CCcEE
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRA------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND---YFEAK 801 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~---~~~vk 801 (885)
..++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++. ...++
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEE
Confidence 9999999999999999998643 34889999999999999999999 899999999999999984 44699
Q ss_pred EeeccCcccccCCCC-CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 802 VSDFGLARLISDCES-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 802 l~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
|+|||.+........ .......++..|+|||++.+..++.++||||+|+++|+|++ |+.||...
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 249 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 249 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc
Confidence 999999876543221 12233457889999999999999999999999999999998 99998643
No 274
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.97 E-value=1.4e-29 Score=272.36 Aligned_cols=193 Identities=25% Similarity=0.368 Sum_probs=161.9
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEe-----------
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV----------- 728 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~----------- 728 (885)
.+|++.+.||+|+||.||+|++. +++.||+|++.... .....+.+|++++++++||||+++++++.+
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 46999999999999999999875 68999999986532 334678899999999999999999998754
Q ss_pred --CCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeecc
Q 047790 729 --GEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFG 806 (885)
Q Consensus 729 --~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg 806 (885)
....++||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg 161 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFG 161 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEeeCc
Confidence 35679999999999999999876666888999999999999999999 8999999999999999999999999999
Q ss_pred CcccccCCC-------------CCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHh
Q 047790 807 LARLISDCE-------------SHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVT 857 (885)
Q Consensus 807 ~a~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~ellt 857 (885)
.+....... ........++..|+|||++.+. .++.++||||+||++|+|++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~ 226 (303)
T 1zy4_A 162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY 226 (303)
T ss_dssp CCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS
T ss_pred chhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh
Confidence 988764321 1112334588999999998865 68999999999999999998
No 275
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=7.5e-33 Score=327.49 Aligned_cols=432 Identities=14% Similarity=0.107 Sum_probs=269.2
Q ss_pred CCCcccCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcc---cCcCCcCcc------------CcCCCC
Q 047790 51 TRHCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLL---FGQLSPQVS------------NLKRLK 115 (885)
Q Consensus 51 ~~~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l---~~~~~~~~~------------~l~~L~ 115 (885)
.-|++|.++.+...+.. .+.. ......+..+..+++|++|+|+++.. .+.+|..++ .+++|+
T Consensus 39 ~vck~W~~~~~~~~~~l--~~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~ 115 (592)
T 3ogk_B 39 LVCRRWFKIDSETREHV--TMAL-CYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLK 115 (592)
T ss_dssp TSCHHHHHHHHHHCCEE--EESC-GGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred HHhHHHHHhhhccccEE--EEee-ccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCC
Confidence 34668999876544322 2222 22233344567889999999988643 244555544 789999
Q ss_pred EEeccCCcCCCCCCcccccc--ccccEeeeeccC-CCC-CCCccccCCccCceEEccCCcCCcc----CCcccCCCCCCc
Q 047790 116 MLSVGENQLSGSIPSQLGLL--TRLETISLRSNS-FTG-EMPSELGDIKQLKSLDFSGNGLNGT----IPSRLGDLTQLQ 187 (885)
Q Consensus 116 ~L~L~~n~l~~~~p~~~~~l--~~L~~L~Ls~N~-l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~ 187 (885)
+|+|++|.+++..+..++.. ++|++|+|++|. ++. .++.....+++|++|+|++|.+++. ++..+..+++|+
T Consensus 116 ~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~ 195 (592)
T 3ogk_B 116 SVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLE 195 (592)
T ss_dssp EEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCC
T ss_pred eEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCcc
Confidence 99999999987777777664 459999999987 221 1223334789999999999998765 333456789999
Q ss_pred cccccccccCCCCCc----ccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCC
Q 047790 188 DLDLSDNLLSGSLPV----SLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSM 263 (885)
Q Consensus 188 ~L~Ls~N~l~~~~p~----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~ 263 (885)
+|++++|.+++ +.. ..+.++++|++|++++|.+.+ +|..+.++++|++|.++.... ....+..+..+..+++
T Consensus 196 ~L~L~~n~~~~-~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~--~~~~~~~~~~l~~~~~ 271 (592)
T 3ogk_B 196 VLNFYMTEFAK-ISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNE--DIGMPEKYMNLVFPRK 271 (592)
T ss_dssp EEECTTCCCSS-CCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCC--CTTCTTSSSCCCCCTT
T ss_pred EEEeeccCCCc-cCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhccccccc--ccchHHHHHHhhcccc
Confidence 99999999872 221 235678999999999999985 678888899999999864211 1112344566778889
Q ss_pred CcEEEecCCcccccccccccCCCCCcEEEccCCCCcCccc-ccccccCCcceeeccccccCC-CCCcccCCC-CceeEEe
Q 047790 264 LKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIE-DVFDRCTNLSELVLVNNRISG-SIPEYISEL-PLKVFDL 340 (885)
Q Consensus 264 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~~-~L~~L~L 340 (885)
|+.|+++++... .+|..+..+++|++|+|++|.+++... ..+..+++|++|+++ +.+.. .++...... .|++|++
T Consensus 272 L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L 349 (592)
T 3ogk_B 272 LCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRI 349 (592)
T ss_dssp CCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEE
T ss_pred ccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEe
Confidence 999999886443 677778888889999999888765443 346778888888888 43332 222222222 5777777
Q ss_pred e-----------cCccccccCcc-ccCccccceeecccccccCCCcccccc-cccccEEEcc----CCccccc-----Cc
Q 047790 341 Q-----------YNNFTGVIPVS-LWNSENLMEFNAASNLLEGSLSWEISN-AVALEKLDLS----SNMLTRQ-----IP 398 (885)
Q Consensus 341 s-----------~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~~~~~~~-l~~L~~L~Ls----~N~l~~~-----~p 398 (885)
+ .|.+++..... +..+++|++|+++.|.+++..+..+.. +++|+.|+++ .|.+++. ++
T Consensus 350 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~ 429 (592)
T 3ogk_B 350 ERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVR 429 (592)
T ss_dssp ECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHH
T ss_pred ecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHH
Confidence 7 34555432222 234556666666666655544444443 5556666664 4555542 22
Q ss_pred ccccccccccceecccc--cccCcCCCccC-CCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEe
Q 047790 399 KKIGNLTNIQILKLNSN--FFDGIIPMEFG-DCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLN 475 (885)
Q Consensus 399 ~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~ 475 (885)
..+.++++|+.|++++| .+++..+..+. .+++|++|++++|++++. .++..+..+++|+.|+
T Consensus 430 ~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~---------------~~~~~~~~~~~L~~L~ 494 (592)
T 3ogk_B 430 SLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDE---------------GLMEFSRGCPNLQKLE 494 (592)
T ss_dssp HHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHH---------------HHHHHHTCCTTCCEEE
T ss_pred HHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHH---------------HHHHHHhcCcccCeee
Confidence 33445556666666532 24433333332 245566666655555311 2333445556666666
Q ss_pred ccCccccCC-CCCCcccccccceeeeccccce
Q 047790 476 LFGNLLTGS-IPPEFGDSLKVQGLYLGHNQLT 506 (885)
Q Consensus 476 Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~ 506 (885)
+++|.+++. ++..+..+++|+.|++++|+++
T Consensus 495 l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it 526 (592)
T 3ogk_B 495 MRGCCFSERAIAAAVTKLPSLRYLWVQGYRAS 526 (592)
T ss_dssp EESCCCBHHHHHHHHHHCSSCCEEEEESCBCC
T ss_pred ccCCCCcHHHHHHHHHhcCccCeeECcCCcCC
Confidence 666665433 2222344556666666666655
No 276
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.96 E-value=6.1e-30 Score=302.47 Aligned_cols=202 Identities=25% Similarity=0.384 Sum_probs=170.7
Q ss_pred eeEEeecceecccCCceEEEEEeCC----CCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD----QKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~----~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
..+|++.+.||+|+||.||+|.+.. +..||+|++..... ...+.+.+|+.++++++||||+++++++. ++..++
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEE
Confidence 4569999999999999999998643 45689998865432 23467889999999999999999999985 466899
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+++|+|.+++..+...+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+......
T Consensus 468 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~ 544 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 544 (656)
T ss_dssp EEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC-
T ss_pred EEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeecCCC
Confidence 99999999999999876667999999999999999999999 899999999999999999999999999999876543
Q ss_pred CCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.........+++.|+|||++.+..++.++||||+||++|||++ |..||...
T Consensus 545 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~ 596 (656)
T 2j0j_A 545 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 596 (656)
T ss_dssp ---------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred cceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCC
Confidence 3333333456789999999999999999999999999999997 99998753
No 277
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.96 E-value=7.4e-30 Score=277.79 Aligned_cols=200 Identities=26% Similarity=0.335 Sum_probs=169.9
Q ss_pred eeEEeecceecccCCceEEEEEe--CCCCeEEEEEeccccc--ccHHHHHHHHHHhccc---CCCCccceeeeeE-----
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTM--PDQKTVAVKKLSQATG--QCDREFAAEMETLDMV---KHQNLVQLLGYCS----- 727 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~--~~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l---~~~~i~~~~~~~~----- 727 (885)
..+|++.+.||+|+||.||+|++ .+++.||+|++..... .....+.+|+++++.+ +||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~ 89 (326)
T 1blx_A 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 89 (326)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence 35799999999999999999987 3578899999865432 1223566778777766 8999999999986
Q ss_pred eCCeeEEEEecccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeecc
Q 047790 728 VGEEKLLVYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFG 806 (885)
Q Consensus 728 ~~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg 806 (885)
.....++||||++ ++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||
T Consensus 90 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~Dfg 165 (326)
T 1blx_A 90 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFG 165 (326)
T ss_dssp SEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSCC
T ss_pred CCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEecCc
Confidence 4567899999997 69999987643 34899999999999999999999 8999999999999999999999999999
Q ss_pred CcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 807 LARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 807 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.+...... .......++..|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 166 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 222 (326)
T 1blx_A 166 LARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS 222 (326)
T ss_dssp SCCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccCC--CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCC
Confidence 99776532 2233456899999999999999999999999999999999999999754
No 278
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=3.9e-30 Score=283.15 Aligned_cols=286 Identities=20% Similarity=0.231 Sum_probs=194.5
Q ss_pred CCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC-CceeE
Q 047790 260 NCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVF 338 (885)
Q Consensus 260 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L 338 (885)
.++.....++++|.++ .+|..+. ++|++|++++|.+++.++..|..+++|++|++++|++++..|..+..+ .|++|
T Consensus 29 ~C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 29 SCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp EECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 4555666888888888 5676554 488888888888888877788888888888888888887766666665 57777
Q ss_pred EeecCccccccCccccCccccceeecccccccCCCc-ccccccccccEEEccCC-cccccCcccccccccccceeccccc
Q 047790 339 DLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLS-WEISNAVALEKLDLSSN-MLTRQIPKKIGNLTNIQILKLNSNF 416 (885)
Q Consensus 339 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N~ 416 (885)
++++|++++..+..+..+++|++|++++|++.+..+ ..|..+++|++|++++| .++...+..|..+++|+.|++++|.
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 185 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASD 185 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCC
Confidence 777777776555556666666666666666665444 35666666666666666 3555555566666666666666666
Q ss_pred ccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchh-cccCCCCCEEeccCccccCCCCCCccccccc
Q 047790 417 FDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGS-LSRLTNLTTLNLFGNLLTGSIPPEFGDSLKV 495 (885)
Q Consensus 417 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~-l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 495 (885)
+++..|..+..+++|++|++++|+++ .+|.. +..+++|+.|++++|++++..+..+.
T Consensus 186 l~~~~~~~l~~l~~L~~L~l~~n~l~-----------------~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~----- 243 (353)
T 2z80_A 186 LQSYEPKSLKSIQNVSHLILHMKQHI-----------------LLLEIFVDVTSSVECLELRDTDLDTFHFSELS----- 243 (353)
T ss_dssp CCEECTTTTTTCSEEEEEEEECSCST-----------------THHHHHHHHTTTEEEEEEESCBCTTCCCC--------
T ss_pred cCccCHHHHhccccCCeecCCCCccc-----------------cchhhhhhhcccccEEECCCCccccccccccc-----
Confidence 66666666666666666666666553 23332 23455666666666665543322211
Q ss_pred ceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCccccccc
Q 047790 496 QGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYL 575 (885)
Q Consensus 496 ~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L 575 (885)
.......++.++|++|.++ +|.+. .+|+.++++++|++|
T Consensus 244 --------------------------------~~~~~~~l~~l~L~~~~l~--------~~~l~-~l~~~l~~l~~L~~L 282 (353)
T 2z80_A 244 --------------------------------TGETNSLIKKFTFRNVKIT--------DESLF-QVMKLLNQISGLLEL 282 (353)
T ss_dssp -----------------------------------CCCCCCEEEEESCBCC--------HHHHH-HHHHHHHTCTTCCEE
T ss_pred --------------------------------cccccchhhcccccccccc--------Ccchh-hhHHHHhcccCCCEE
Confidence 1123455677777766665 55555 678888999999999
Q ss_pred ccccccCCCCCCccc-cCccccceeecccCcCCCCCCC
Q 047790 576 DFSMNMLDGHIPEKL-CSLPYLLYLNLADNRLEGEVPR 612 (885)
Q Consensus 576 ~Ls~N~l~~~ip~~l-~~l~~L~~L~l~~N~l~~~~p~ 612 (885)
||++|+++ .+|..+ ..+++|++|++++|++.+.+|.
T Consensus 283 ~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 283 EFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp ECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred ECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 99999998 677774 7899999999999999887663
No 279
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.96 E-value=1.1e-29 Score=271.13 Aligned_cols=198 Identities=27% Similarity=0.368 Sum_probs=172.1
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
..+|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++...+..++||
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 100 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence 467999999999999999999876 58899999986543 234578899999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCC---CcEEEeeccCcccccC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY---FEAKVSDFGLARLISD 813 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~---~~vkl~Dfg~a~~~~~ 813 (885)
||+++++|.+++.... .+++..+..++.|++.|++||| +.|++||||||+||+++.. +.+||+|||.+.....
T Consensus 101 e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~ 176 (287)
T 2wei_A 101 ELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (287)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred EccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence 9999999999887544 4899999999999999999999 8999999999999999754 4699999999877653
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.. ......++..|+|||++.+. ++.++||||+|+++|+|++|+.||..
T Consensus 177 ~~--~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~ 224 (287)
T 2wei_A 177 NT--KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYG 224 (287)
T ss_dssp CS--SCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CC--ccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCC
Confidence 22 12233578899999998764 88999999999999999999999865
No 280
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.96 E-value=3.1e-30 Score=279.85 Aligned_cols=199 Identities=20% Similarity=0.322 Sum_probs=166.8
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
...|++.+.||+|+||.||+|++.+ .+|+|++.... ....+.+.+|++++++++||||+++++++......++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 4679999999999999999998754 58999987543 2233567789999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC---
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC--- 814 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~--- 814 (885)
|+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++ ++.++|+|||.+......
T Consensus 110 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~ 185 (319)
T 2y4i_B 110 LCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG 185 (319)
T ss_dssp CCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred cccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence 99999999999876667999999999999999999999 89999999999999998 579999999998765321
Q ss_pred -CCCcccCCCCCCccCCcccccC---------CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 815 -ESHVSTDTADTIGYVPSEYGQA---------GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 815 -~~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.........++..|+|||++.+ ..++.++||||||+++|||++|+.||..
T Consensus 186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 245 (319)
T 2y4i_B 186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKT 245 (319)
T ss_dssp --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSS
T ss_pred ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 1122233458899999998875 3578899999999999999999999974
No 281
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.96 E-value=2e-29 Score=276.34 Aligned_cols=201 Identities=27% Similarity=0.412 Sum_probs=169.9
Q ss_pred eeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcc--cCCCCccceeeeeEeCC----ee
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDM--VKHQNLVQLLGYCSVGE----EK 732 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~--l~~~~i~~~~~~~~~~~----~~ 732 (885)
+..+|++.+.||+|+||.||+|++ +++.||+|++.... ...+.+|+++++. ++||||+++++++.... ..
T Consensus 40 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~ 115 (342)
T 1b6c_B 40 IARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 115 (342)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCE
T ss_pred ccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchh---HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcccee
Confidence 446799999999999999999987 58899999986542 4567788888877 78999999999998765 78
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcc-----CCCCceecCCCCCcEEEcCCCcEEEeeccC
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHG-----FKPYIIHMDIKTSNILLNDYFEAKVSDFGL 807 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~-----~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~ 807 (885)
++||||+++++|.+++... .+++..+..++.|++.|++|||.. .+.+|+||||||+||+++.++.+||+|||.
T Consensus 116 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 193 (342)
T 1b6c_B 116 WLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 193 (342)
T ss_dssp EEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCC
Confidence 9999999999999999754 489999999999999999999932 146899999999999999999999999999
Q ss_pred cccccCCCCC---cccCCCCCCccCCcccccCCC------CCCcchhHHHHHHHHHHHhC----------CCCCCCC
Q 047790 808 ARLISDCESH---VSTDTADTIGYVPSEYGQAGR------ANERGDIYSFGVILLELVTG----------KQPTGPE 865 (885)
Q Consensus 808 a~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~------~~~~~DvwslGvvl~elltg----------~~P~~~~ 865 (885)
+......... ......+++.|+|||++.+.. ++.++|||||||++|||++| ..||...
T Consensus 194 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~ 270 (342)
T 1b6c_B 194 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 270 (342)
T ss_dssp CEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred ceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCcccc
Confidence 9876543322 224457899999999988763 33689999999999999999 7788654
No 282
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.96 E-value=8.7e-30 Score=280.55 Aligned_cols=201 Identities=24% Similarity=0.341 Sum_probs=169.4
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeC-----Ce
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVG-----EE 731 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~-----~~ 731 (885)
+..+|++.+.||+|+||.||+|++. +++.||+|++..... ....++.+|++++++++||||+++++++..+ ..
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 3467999999999999999999875 588999999865332 2345678999999999999999999987654 67
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
.++||||+. ++|.+++... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+...
T Consensus 89 ~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARII 162 (353)
T ss_dssp EEEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence 899999996 5999988753 4899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCCC---------cccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 812 SDCESH---------VSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 812 ~~~~~~---------~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
...... ......+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 226 (353)
T 2b9h_A 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGR 226 (353)
T ss_dssp C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 532111 1123467999999998765 67899999999999999999999999754
No 283
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.96 E-value=8.6e-30 Score=283.41 Aligned_cols=200 Identities=25% Similarity=0.282 Sum_probs=170.3
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccC-CC-----CccceeeeeEeCCe
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQ-----NLVQLLGYCSVGEE 731 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-~~-----~i~~~~~~~~~~~~ 731 (885)
...+|++.+.||+|+||.||+|.+. +++.||+|++.... .....+..|+++++.++ |+ +|+++++++...+.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 3567999999999999999999865 57889999997533 22456778888888886 44 49999999999999
Q ss_pred eEEEEecccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc--CCCcEEEeeccCc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN--DYFEAKVSDFGLA 808 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~--~~~~vkl~Dfg~a 808 (885)
.++||||+. ++|.+++.... ..+++..+..++.|++.|++|||.. +.||+||||||+||+++ .++.+||+|||.+
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred eEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 999999995 59999988643 4589999999999999999999931 47899999999999995 4778999999999
Q ss_pred ccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 809 RLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
...... .....+|+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 209 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 209 CQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp EETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 876432 23457899999999999999999999999999999999999999754
No 284
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.96 E-value=1.4e-29 Score=279.01 Aligned_cols=199 Identities=20% Similarity=0.273 Sum_probs=170.0
Q ss_pred eeeeEEeecceecccCCceEEEEEeCC-C-CeEEEEEecccccccHHHHHHHHHHhcccCCCC------ccceeeeeEeC
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMPD-Q-KTVAVKKLSQATGQCDREFAAEMETLDMVKHQN------LVQLLGYCSVG 729 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~~-~-~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~------i~~~~~~~~~~ 729 (885)
.+..+|++.+.||+|+||.||+|.+.. + +.||+|++.... .....+.+|+++++.++|++ ++.+++++...
T Consensus 16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 94 (355)
T 2eu9_A 16 WLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH 94 (355)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred eecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence 345689999999999999999998753 4 689999986532 33567888999999987655 88999999999
Q ss_pred CeeEEEEecccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE--------------
Q 047790 730 EEKLLVYEYMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL-------------- 794 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~-------------- 794 (885)
+..++||||+ ++++.+++... ...+++..+..++.|++.|++||| +.||+||||||+||++
T Consensus 95 ~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 170 (355)
T 2eu9_A 95 GHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKS 170 (355)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-C
T ss_pred CeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccccccc
Confidence 9999999999 66777766643 346899999999999999999999 9999999999999999
Q ss_pred -----cCCCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 795 -----NDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 795 -----~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+..+.+||+|||.+..... ......+|+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 171 ~~~~~~~~~~~kl~Dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 242 (355)
T 2eu9_A 171 CEEKSVKNTSIRVADFGSATFDHE----HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 242 (355)
T ss_dssp CCEEEESCCCEEECCCTTCEETTS----CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccCCCcEEEeecCccccccc----cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 5678899999999976443 223457899999999999999999999999999999999999999754
No 285
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.96 E-value=8.1e-30 Score=300.29 Aligned_cols=195 Identities=26% Similarity=0.428 Sum_probs=164.3
Q ss_pred cceecccCCceEEEEEeC---CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 666 ENVIGGGGFRTAFKGTMP---DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 666 ~~~lG~G~~g~vy~a~~~---~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
.++||+|+||.||+|.+. .++.||+|+++.... ...+++.+|++++++++||||+++++++.. +..++||||++
T Consensus 374 ~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~ 452 (635)
T 4fl3_A 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAE 452 (635)
T ss_dssp EEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred CCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccC
Confidence 358999999999999653 367899999976432 235789999999999999999999999864 55789999999
Q ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC--c
Q 047790 741 NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH--V 818 (885)
Q Consensus 741 ~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~--~ 818 (885)
+++|.+++... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++.+...... .
T Consensus 453 ~g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 528 (635)
T 4fl3_A 453 LGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528 (635)
T ss_dssp TEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred CCCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccc
Confidence 99999999754 45899999999999999999999 899999999999999999999999999999876543222 1
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.....++..|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~ 576 (635)
T 4fl3_A 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 576 (635)
T ss_dssp ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 222345788999999999999999999999999999998 99999753
No 286
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.96 E-value=9.8e-30 Score=279.99 Aligned_cols=198 Identities=25% Similarity=0.326 Sum_probs=166.9
Q ss_pred eeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCe--
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEE-- 731 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~-- 731 (885)
+-+..+|.+.+.||+|+||.||+|.+. +|+.||+|++..... ....++.+|+++++.++||||+++++++.....
T Consensus 20 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 99 (353)
T 3coi_A 20 WELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLR 99 (353)
T ss_dssp EEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGG
T ss_pred cccCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccc
Confidence 445678999999999999999999875 588999999875432 224578899999999999999999999876543
Q ss_pred ----eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccC
Q 047790 732 ----KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGL 807 (885)
Q Consensus 732 ----~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~ 807 (885)
.++||||++ ++|.+++. ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.
T Consensus 100 ~~~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 100 NFYDFYLVMPFMQ-TDLQKIMG---LKFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp GCCCCEEEEECCS-EEGGGTTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred cceeEEEEecccc-CCHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999996 58877664 24899999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+...... .....+++.|+|||++.+ ..++.++||||+||++|+|++|+.||...
T Consensus 173 ~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 227 (353)
T 3coi_A 173 ARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 227 (353)
T ss_dssp TTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSS
T ss_pred ccCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 8765432 233467999999999887 67899999999999999999999999753
No 287
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.96 E-value=2.3e-31 Score=286.50 Aligned_cols=199 Identities=27% Similarity=0.426 Sum_probs=153.6
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcc--cCCCCccceeeeeEeCC----eeEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDM--VKHQNLVQLLGYCSVGE----EKLL 734 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~--l~~~~i~~~~~~~~~~~----~~~l 734 (885)
.+|++.+.||+|+||.||+|++. ++.||+|++... ....+.+|.+++.. ++||||+++++++.... ..++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 56899999999999999999874 889999998653 24567778888877 78999999999987765 7899
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccC-----CCCceecCCCCCcEEEcCCCcEEEeeccCcc
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGF-----KPYIIHMDIKTSNILLNDYFEAKVSDFGLAR 809 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~-----~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~ 809 (885)
||||+++|+|.+++... .+++..+..++.|++.|++|||... +.+|+||||||+||+++.++.+||+|||.+.
T Consensus 79 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~ 156 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp EEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-C
T ss_pred EEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcce
Confidence 99999999999999754 3778889999999999999999321 5789999999999999999999999999997
Q ss_pred cccCCCCCc---ccCCCCCCccCCcccccCC------CCCCcchhHHHHHHHHHHHhC----------CCCCCCC
Q 047790 810 LISDCESHV---STDTADTIGYVPSEYGQAG------RANERGDIYSFGVILLELVTG----------KQPTGPE 865 (885)
Q Consensus 810 ~~~~~~~~~---~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslGvvl~elltg----------~~P~~~~ 865 (885)
......... .....+|+.|+|||++.+. .++.++|||||||++|||++| ..||...
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~ 231 (303)
T 3gxj_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 231 (303)
T ss_dssp CEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTT
T ss_pred eccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccccc
Confidence 765432221 2234689999999998876 334689999999999999999 7777543
No 288
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.96 E-value=2.3e-29 Score=273.93 Aligned_cols=200 Identities=24% Similarity=0.322 Sum_probs=151.0
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHH-HhcccCCCCccceeeeeEeCCeeEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEME-TLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~-~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
...+|++.+.||+|+||.||+|.+. +++.||+|++..... ....++..|+. +++.++||||+++++++..++..++|
T Consensus 20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv 99 (327)
T 3aln_A 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC 99 (327)
T ss_dssp CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence 3467999999999999999999875 588999999976432 22345555655 67788999999999999999999999
Q ss_pred EecccCCCHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHhccCCC-CceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 736 YEYMVNGSLDDWLRN----RAASLDWGKRCKIAYGAARGISFLHHGFKP-YIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~----~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~-~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
|||+++ ++.+++.. ....+++..+..++.|++.|++||| +. ||+||||||+||+++.++.+||+|||.+..
T Consensus 100 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 100 MELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp ECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 999975 88887763 2456899999999999999999999 77 999999999999999999999999999977
Q ss_pred ccCCCCCcccCCCCCCccCCcccc----cCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 811 ISDCESHVSTDTADTIGYVPSEYG----QAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 811 ~~~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
..... ......++..|+|||++ .+..++.++||||+|+++|+|++|+.||..
T Consensus 176 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 231 (327)
T 3aln_A 176 LVDSI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPK 231 (327)
T ss_dssp --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSC
T ss_pred ccccc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 65422 22334689999999998 456789999999999999999999999975
No 289
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.96 E-value=1.1e-29 Score=282.13 Aligned_cols=204 Identities=22% Similarity=0.296 Sum_probs=170.3
Q ss_pred eceeeeeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhcccC-----------CCCccce
Q 047790 655 GSVLVIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVK-----------HQNLVQL 722 (885)
Q Consensus 655 g~~~~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-----------~~~i~~~ 722 (885)
|..+...+|++.+.||+|+||.||+|++ .+++.||+|++.... .....+.+|++++++++ ||||+++
T Consensus 13 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~ 91 (373)
T 1q8y_A 13 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKL 91 (373)
T ss_dssp TCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCC
T ss_pred CCcccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHH
Confidence 3444557899999999999999999986 458899999987533 23466888999998886 7899999
Q ss_pred eeeeEeCC----eeEEEEecccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCC-CceecCCCCCcEEEc-
Q 047790 723 LGYCSVGE----EKLLVYEYMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKP-YIIHMDIKTSNILLN- 795 (885)
Q Consensus 723 ~~~~~~~~----~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~-~i~H~dlkp~Nil~~- 795 (885)
++++...+ ..++||||+ +++|.+++... ...+++..+..++.|++.|++||| ++ ||+||||||+||+++
T Consensus 92 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~ 167 (373)
T 1q8y_A 92 LDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEI 167 (373)
T ss_dssp CEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEE
T ss_pred HHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEec
Confidence 99987644 789999999 88999998763 345899999999999999999999 87 999999999999994
Q ss_pred -----CCCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 796 -----DYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 796 -----~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
..+.+||+|||.+...... .....+|+.|+|||++.+..++.++||||+||++|||++|+.||.....
T Consensus 168 ~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 240 (373)
T 1q8y_A 168 VDSPENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEG 240 (373)
T ss_dssp EETTTTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred cCCCcCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcc
Confidence 4447999999999876432 2334689999999999999999999999999999999999999986543
No 290
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.96 E-value=7.8e-30 Score=278.38 Aligned_cols=200 Identities=22% Similarity=0.248 Sum_probs=147.2
Q ss_pred eeeeeEEeec-ceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEe----CC
Q 047790 657 VLVIAIIVFE-NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV----GE 730 (885)
Q Consensus 657 ~~~~~~~~~~-~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~----~~ 730 (885)
..+..+|++. +.||+|+||.||+|.+. +++.||+|++.... ....+....++.+.||||+++++++.. +.
T Consensus 24 ~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 99 (336)
T 3fhr_A 24 YAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKR 99 (336)
T ss_dssp SCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCc
Confidence 4455678885 56999999999999876 58999999986532 222223334566789999999999876 44
Q ss_pred eeEEEEecccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC---CCcEEEeecc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND---YFEAKVSDFG 806 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~---~~~vkl~Dfg 806 (885)
..++||||+++++|.+++..+. ..+++..+..++.|++.|++||| +.||+||||||+||+++. .+.+||+|||
T Consensus 100 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg 176 (336)
T 3fhr_A 100 CLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFG 176 (336)
T ss_dssp EEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred eEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccc
Confidence 5799999999999999998643 35899999999999999999999 899999999999999975 4459999999
Q ss_pred CcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 807 LARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 807 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
.+...... ......+++.|+|||++.+..++.++||||+|+++|+|++|+.||....
T Consensus 177 ~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 233 (336)
T 3fhr_A 177 FAKETTQN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNT 233 (336)
T ss_dssp TCEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----
T ss_pred cceecccc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCcc
Confidence 99865432 2233467999999999988889999999999999999999999996543
No 291
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.96 E-value=9.9e-30 Score=275.75 Aligned_cols=218 Identities=23% Similarity=0.362 Sum_probs=179.9
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc------cHHHHHHHHHHhcccC--CCCccceeeeeEeC
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ------CDREFAAEMETLDMVK--HQNLVQLLGYCSVG 729 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~------~~~~~~~E~~~l~~l~--~~~i~~~~~~~~~~ 729 (885)
...+|++.+.||+|+||.||+|.+. +++.||+|++...... ....+.+|++++++++ ||||+++++++..+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 3457999999999999999999864 5889999998754321 2245678999999996 59999999999999
Q ss_pred CeeEEEEecccC-CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc-CCCcEEEeeccC
Q 047790 730 EEKLLVYEYMVN-GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN-DYFEAKVSDFGL 807 (885)
Q Consensus 730 ~~~~lv~e~~~~-~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~-~~~~vkl~Dfg~ 807 (885)
+..++|||++.+ ++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++ +++.+||+|||.
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~ 196 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGS 196 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred CcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence 999999999976 89999998643 4899999999999999999999 89999999999999999 788999999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccCCCC-CCcchhHHHHHHHHHHHhCCCCCCCC---------CCCCCCCCHHHH
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQPTGPE---------FEDKDGGNLVDW 877 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~P~~~~---------~~~~~~~~l~~~ 877 (885)
+...... ......++..|+|||++.+..+ +.++||||||+++|||++|+.||... ........+.+.
T Consensus 197 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~l 273 (320)
T 3a99_A 197 GALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 273 (320)
T ss_dssp CEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHCCCCCSSCCCHHHHHH
T ss_pred ccccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhhcccccccccCCHHHHHH
Confidence 9876542 2234568999999999887766 67899999999999999999998632 122233445666
Q ss_pred HHHHHh
Q 047790 878 VLLMMK 883 (885)
Q Consensus 878 ~~~~~~ 883 (885)
+..++.
T Consensus 274 i~~~l~ 279 (320)
T 3a99_A 274 IRWCLA 279 (320)
T ss_dssp HHHHTC
T ss_pred HHHHcc
Confidence 666554
No 292
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.96 E-value=6.9e-30 Score=276.17 Aligned_cols=219 Identities=25% Similarity=0.330 Sum_probs=172.8
Q ss_pred eeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc------cHHHHHHHHHHhccc----CCCCccceeeee
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ------CDREFAAEMETLDMV----KHQNLVQLLGYC 726 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~------~~~~~~~E~~~l~~l----~~~~i~~~~~~~ 726 (885)
....+|++.+.||+|+||.||+|++. +++.||+|++...... ....+.+|+++++++ +||||+++++++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 34567999999999999999999864 5889999999754321 123456789999888 899999999999
Q ss_pred EeCCeeEEEEec-ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc-CCCcEEEee
Q 047790 727 SVGEEKLLVYEY-MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN-DYFEAKVSD 804 (885)
Q Consensus 727 ~~~~~~~lv~e~-~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~-~~~~vkl~D 804 (885)
..++..++|||| +.+++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++ .++.+||+|
T Consensus 108 ~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~d 183 (312)
T 2iwi_A 108 ETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLID 183 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEEECC
T ss_pred ecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEEEEE
Confidence 988999999999 78899999998654 4899999999999999999999 89999999999999999 888999999
Q ss_pred ccCcccccCCCCCcccCCCCCCccCCcccccCCCCC-CcchhHHHHHHHHHHHhCCCCCCCC---------CCCCCCCCH
Q 047790 805 FGLARLISDCESHVSTDTADTIGYVPSEYGQAGRAN-ERGDIYSFGVILLELVTGKQPTGPE---------FEDKDGGNL 874 (885)
Q Consensus 805 fg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwslGvvl~elltg~~P~~~~---------~~~~~~~~l 874 (885)
||.+....... .....++..|+|||++.+..+. .++||||+|+++|+|++|+.||... ........+
T Consensus 184 fg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 260 (312)
T 2iwi_A 184 FGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVSPDC 260 (312)
T ss_dssp CSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHTCCCCCTTSCHHH
T ss_pred cchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHhhhccCCcccCCHHH
Confidence 99998765422 2345689999999998877664 5899999999999999999999642 122233445
Q ss_pred HHHHHHHHh
Q 047790 875 VDWVLLMMK 883 (885)
Q Consensus 875 ~~~~~~~~~ 883 (885)
.+.+..++.
T Consensus 261 ~~li~~~l~ 269 (312)
T 2iwi_A 261 CALIRRCLA 269 (312)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHcc
Confidence 666666654
No 293
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=1e-29 Score=273.94 Aligned_cols=253 Identities=23% Similarity=0.218 Sum_probs=171.4
Q ss_pred CCcccCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCC--CC
Q 047790 52 RHCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGS--IP 129 (885)
Q Consensus 52 ~~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~--~p 129 (885)
..|.|.+|.|+..+++ .+|..+. ++|++|+|++|.++...+..|+++++|++|+|++|+++.. .|
T Consensus 5 C~C~~~~l~c~~~~l~-----------~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 71 (306)
T 2z66_A 5 CSCSGTEIRCNSKGLT-----------SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCS 71 (306)
T ss_dssp CEEETTEEECCSSCCS-----------SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEE
T ss_pred CeeCCCEEEcCCCCcc-----------cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcc
Confidence 3488998888764332 2344332 5788888888888754444577888888888888877622 35
Q ss_pred ccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCC-cccCCCCCCccccccccccCCCCCccccccc
Q 047790 130 SQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIP-SRLGDLTQLQDLDLSDNLLSGSLPVSLLKNL 208 (885)
Q Consensus 130 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l 208 (885)
..+..+++|++|+|++|.++ .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++ ++...+..+
T Consensus 72 ~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l 149 (306)
T 2z66_A 72 QSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV-AFNGIFNGL 149 (306)
T ss_dssp HHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEE-CSTTTTTTC
T ss_pred cccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCc-cchhhcccC
Confidence 56666777777777777777 456667777777777777777765443 456677777777777777663 333346666
Q ss_pred ccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCC
Q 047790 209 QSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSL 288 (885)
Q Consensus 209 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 288 (885)
++|++|++++|++++ ..+|..+..+++|++|++++|++++..|..+..+++|
T Consensus 150 ~~L~~L~l~~n~l~~----------------------------~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 201 (306)
T 2z66_A 150 SSLEVLKMAGNSFQE----------------------------NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL 201 (306)
T ss_dssp TTCCEEECTTCEEGG----------------------------GEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred cCCCEEECCCCcccc----------------------------ccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCC
Confidence 666666666666653 1234445566677777777787777767777777778
Q ss_pred cEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC--CceeEEeecCcccc
Q 047790 289 VEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL--PLKVFDLQYNNFTG 347 (885)
Q Consensus 289 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~--~L~~L~Ls~N~l~~ 347 (885)
++|+|++|++++..+..+..+++|++|++++|++++..|..+... .|+.|++++|.+++
T Consensus 202 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 202 QVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred CEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 888888887777777677777777777777777777666665554 46666666666654
No 294
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.96 E-value=1.7e-29 Score=279.00 Aligned_cols=203 Identities=26% Similarity=0.269 Sum_probs=156.7
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCC-------
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE------- 730 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~------- 730 (885)
...+|++.+.||+|+||.||+|++. +++.||+|++..... ...+..+|++.++.++||||+++++++....
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 99 (360)
T 3e3p_A 21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDI 99 (360)
T ss_dssp HHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCE
T ss_pred hccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccce
Confidence 3457999999999999999999875 588999998865432 2345667888888999999999999986533
Q ss_pred eeEEEEecccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC-CCcEEEeecc
Q 047790 731 EKLLVYEYMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND-YFEAKVSDFG 806 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~-~~~vkl~Dfg 806 (885)
..++||||+++ ++.+.+.. ....+++..+..++.|++.|++|+|. ++.||+||||||+||+++. ++.+||+|||
T Consensus 100 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg 177 (360)
T 3e3p_A 100 YLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL-PSVNVCHRDIKPHNVLVNEADGTLKLCDFG 177 (360)
T ss_dssp EEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTS-TTTCCBCSCCCGGGEEEETTTTEEEECCCT
T ss_pred eEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhC-CCCCeecCcCCHHHEEEeCCCCcEEEeeCC
Confidence 37899999976 55554432 44558999999999999999999993 3689999999999999996 8899999999
Q ss_pred CcccccCCCCCcccCCCCCCccCCcccccCCC-CCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 807 LARLISDCESHVSTDTADTIGYVPSEYGQAGR-ANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 807 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
.+..+.... ......+|+.|+|||++.+.. ++.++||||+||++|+|++|+.||....
T Consensus 178 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~ 236 (360)
T 3e3p_A 178 SAKKLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDN 236 (360)
T ss_dssp TCBCCCTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CceecCCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCC
Confidence 998765432 223456899999999987654 8999999999999999999999997643
No 295
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.96 E-value=3.2e-29 Score=271.75 Aligned_cols=200 Identities=22% Similarity=0.301 Sum_probs=153.9
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc-c-HHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ-C-DREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~-~-~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
.+.+|++.+.||+|+||.||+|.+. +++.||+|++...... . .+.+.++..+++.++||||+++++++..++..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 3567999999999999999999875 5899999999754322 1 23344555667888999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCC-CceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP-YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~-~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
|||+ ++.+..+.......+++..+..++.|++.|++||| ++ ||+||||||+||+++.++.+||+|||.+..+...
T Consensus 103 ~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 103 MELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp ECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred Eecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence 9999 66777766655566999999999999999999999 75 9999999999999999999999999998766542
Q ss_pred CCCcccCCCCCCccCCccccc-----CCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQ-----AGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
. ......+++.|+|||++. +..++.++||||+|+++|+|++|+.||..
T Consensus 179 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 231 (318)
T 2dyl_A 179 K--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKN 231 (318)
T ss_dssp ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred c--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCC
Confidence 2 223446899999999984 45688999999999999999999999975
No 296
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.96 E-value=1.7e-29 Score=284.40 Aligned_cols=197 Identities=21% Similarity=0.302 Sum_probs=160.2
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..|.+.++||+|+||.||.....+++.||+|++..... ..+.+|+++++.+ +||||+++++++.+....|+||||+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 46999999999999997666566889999999865432 2356799999998 7999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC-----CCcEEEeeccCcccccCC
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND-----YFEAKVSDFGLARLISDC 814 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~-----~~~vkl~Dfg~a~~~~~~ 814 (885)
. ++|.+++........+..+..++.|++.|++||| +.||+||||||+||+++. ...+||+|||++......
T Consensus 101 ~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 101 A-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp S-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred C-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 5 5999999876555666667899999999999999 899999999999999953 235889999999876543
Q ss_pred CC--CcccCCCCCCccCCccccc---CCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 815 ES--HVSTDTADTIGYVPSEYGQ---AGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 815 ~~--~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.. .......+|+.|+|||++. ...++.++||||+||++|||++ |..||..
T Consensus 177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~ 232 (432)
T 3p23_A 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGK 232 (432)
T ss_dssp ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBS
T ss_pred CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcch
Confidence 21 2223456899999999988 4567889999999999999999 9999864
No 297
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.96 E-value=8.2e-30 Score=295.22 Aligned_cols=200 Identities=25% Similarity=0.371 Sum_probs=171.2
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEe------CCe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSV------GEE 731 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~------~~~ 731 (885)
+++|++.++||+|+||.||+|.+. +++.||+|++.... .....++.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 478999999999999999999874 58899999987543 2335678899999999999999999998754 567
Q ss_pred eEEEEecccCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc---EEEeecc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRA--ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE---AKVSDFG 806 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~---vkl~Dfg 806 (885)
.++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++. ++|+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 799999999999999998643 25888899999999999999999 899999999999999986654 8999999
Q ss_pred CcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 807 LARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 807 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.+....... ......++..|+|||++.+..++.++||||+||++|+|++|+.||.+
T Consensus 170 ~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~ 225 (676)
T 3qa8_A 170 YAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 225 (676)
T ss_dssp CCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 998765432 23445789999999999999999999999999999999999999964
No 298
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.96 E-value=3.2e-29 Score=283.13 Aligned_cols=198 Identities=24% Similarity=0.315 Sum_probs=158.4
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..|.+++.||+|+||.||.+...+|+.||+|++.... .+.+.+|+++++++ +||||+++++++.+++..++||||+
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 4577789999999999987777789999999986532 45678899999876 7999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCC------CHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCC-------------CcE
Q 047790 740 VNGSLDDWLRNRAASL------DWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY-------------FEA 800 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~------~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~-------------~~v 800 (885)
. |+|.+++....... .+..+..++.|++.|++||| +.||+||||||+||+++.. +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEE
Confidence 5 59999998543211 22235679999999999999 8999999999999999754 479
Q ss_pred EEeeccCcccccCCCCC---cccCCCCCCccCCcccccC-------CCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 801 KVSDFGLARLISDCESH---VSTDTADTIGYVPSEYGQA-------GRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 801 kl~Dfg~a~~~~~~~~~---~~~~~~~~~~y~aPE~~~~-------~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
||+|||.+..+...... ......+|+.|+|||++.+ ..++.++||||+||++|||++ |+.||...
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~ 243 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 243 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCST
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCc
Confidence 99999999887543221 1224568999999999876 568999999999999999999 99999753
No 299
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=2.3e-29 Score=271.17 Aligned_cols=181 Identities=21% Similarity=0.222 Sum_probs=97.5
Q ss_pred CCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCccc-ccccccCCcceeeccccccCCCCCcccCCC-CceeE
Q 047790 261 CSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIE-DVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVF 338 (885)
Q Consensus 261 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L 338 (885)
+++|++|++++|.++ .+|..+..+++|++|++++|.+++..+ ..+..+++|++|++++|++.+..+..+..+ .|++|
T Consensus 77 ~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 155 (306)
T 2z66_A 77 TTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 155 (306)
T ss_dssp CSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEE
T ss_pred ccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEE
Confidence 344444444444444 233334444444444444444444433 344444555555555554444444444333 34444
Q ss_pred EeecCcccc-ccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccc
Q 047790 339 DLQYNNFTG-VIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFF 417 (885)
Q Consensus 339 ~Ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 417 (885)
++++|.+++ ..|..+..+++|++|++++|.+++..|..|..+++|++|+|++|++++..+..+..+++|+.|+|++|++
T Consensus 156 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 235 (306)
T 2z66_A 156 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 235 (306)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCC
T ss_pred ECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCC
Confidence 444444443 3455555555555555555555555555566666666666666666655555666666666666666666
Q ss_pred cCcCCCccCCCC-cccEEEcCCcccC
Q 047790 418 DGIIPMEFGDCI-SLNTLDLGSNNLN 442 (885)
Q Consensus 418 ~~~~p~~~~~l~-~L~~L~Ls~N~l~ 442 (885)
++..|..+..++ +|++|+|++|.++
T Consensus 236 ~~~~~~~~~~~~~~L~~L~L~~N~~~ 261 (306)
T 2z66_A 236 MTSKKQELQHFPSSLAFLNLTQNDFA 261 (306)
T ss_dssp CBCSSSSCCCCCTTCCEEECTTCCEE
T ss_pred cccCHHHHHhhhccCCEEEccCCCee
Confidence 666666666663 6666666666664
No 300
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.96 E-value=9.1e-29 Score=263.04 Aligned_cols=179 Identities=15% Similarity=0.081 Sum_probs=155.4
Q ss_pred eceeeeeEEeecceecccCCceEEEEEeCC-CCeEEEEEeccccccc---HHHHHHHHHHhcccCCCCccceeeeeEeCC
Q 047790 655 GSVLVIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQC---DREFAAEMETLDMVKHQNLVQLLGYCSVGE 730 (885)
Q Consensus 655 g~~~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 730 (885)
|..++.++|++.+.||+|+||.||+|++.. ++.||+|++....... .+++.+|++++++++||||+++++++.+++
T Consensus 25 g~~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~ 104 (286)
T 3uqc_A 25 GARIANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA 104 (286)
T ss_dssp TCEETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT
T ss_pred CCEEecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC
Confidence 444666789999999999999999998765 8899999997654322 367889999999999999999999999999
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
..|+||||++|++|.++++.. .....+..++.|++.|++||| +.||+||||||+||+++.++.+||++++.
T Consensus 105 ~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~~--- 175 (286)
T 3uqc_A 105 GGLVVAEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPAT--- 175 (286)
T ss_dssp EEEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCCC---
T ss_pred cEEEEEEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEeccc---
Confidence 999999999999999999642 466678899999999999999 89999999999999999999999985432
Q ss_pred ccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 811 ISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 811 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
++ .++.++||||+||++|||++|+.||.....
T Consensus 176 ------------------~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~ 207 (286)
T 3uqc_A 176 ------------------MP-------DANPQDDIRGIGASLYALLVNRWPLPEAGV 207 (286)
T ss_dssp ------------------CT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSB
T ss_pred ------------------cC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence 22 367889999999999999999999986543
No 301
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1.5e-28 Score=279.79 Aligned_cols=233 Identities=21% Similarity=0.228 Sum_probs=160.4
Q ss_pred ccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCC
Q 047790 80 VSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDI 159 (885)
Q Consensus 80 ~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 159 (885)
+|..+. +++++|+|++|.+++..|..|+++++|++|+|++|+|++..|..|..+++|++|+|++|++++..+..|..+
T Consensus 69 iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 146 (452)
T 3zyi_A 69 VPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYL 146 (452)
T ss_dssp CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSC
T ss_pred cCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhccc
Confidence 454433 567778888887777777777777888888888887777667777777777778887777776666667777
Q ss_pred ccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCccccee
Q 047790 160 KQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLY 239 (885)
Q Consensus 160 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 239 (885)
++|++|+|++|+++...+..|.++++|++|++++|...+.++...|.++++|++|++++|++++. |
T Consensus 147 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~------------- 212 (452)
T 3zyi_A 147 SKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P------------- 212 (452)
T ss_dssp TTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-------------
T ss_pred CCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-------------
Confidence 77777777777777666667777777777777774444467766677777777777777776531 1
Q ss_pred cccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccc
Q 047790 240 LGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVN 319 (885)
Q Consensus 240 l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 319 (885)
.+..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|++|+|++
T Consensus 213 -----------------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 275 (452)
T 3zyi_A 213 -----------------NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAH 275 (452)
T ss_dssp -----------------CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred -----------------cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCC
Confidence 133456677777777777776677777777777777777777777676677777777776666
Q ss_pred cccCCCCCcccCCC-CceeEEeecCcc
Q 047790 320 NRISGSIPEYISEL-PLKVFDLQYNNF 345 (885)
Q Consensus 320 N~l~~~~p~~~~~~-~L~~L~Ls~N~l 345 (885)
|++++..+..+..+ .|+.|+|++|.+
T Consensus 276 N~l~~~~~~~~~~l~~L~~L~L~~Np~ 302 (452)
T 3zyi_A 276 NNLSSLPHDLFTPLRYLVELHLHHNPW 302 (452)
T ss_dssp SCCSCCCTTSSTTCTTCCEEECCSSCE
T ss_pred CcCCccChHHhccccCCCEEEccCCCc
Confidence 66665544444433 344444444443
No 302
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.96 E-value=2.7e-29 Score=300.21 Aligned_cols=196 Identities=21% Similarity=0.287 Sum_probs=167.2
Q ss_pred eeeeEEeecceecccCCceEEEEEeC--CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCe---
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMP--DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEE--- 731 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~--~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~--- 731 (885)
.+.++|++.++||+|+||.||+|.+. +++.||+|++.... ......+.+|++++++++||||+++++++...+.
T Consensus 77 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 156 (681)
T 2pzi_A 77 IVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGD 156 (681)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSC
T ss_pred EeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCC
Confidence 44578999999999999999999875 58899999986543 2334578899999999999999999999987654
Q ss_pred --eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcc
Q 047790 732 --KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLAR 809 (885)
Q Consensus 732 --~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~ 809 (885)
.|+||||++|++|.+++.. .+++..+..++.|++.+++|+| +.||+||||||+||+++.+ .+||+|||.+.
T Consensus 157 ~~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~ 229 (681)
T 2pzi_A 157 PVGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVS 229 (681)
T ss_dssp EEEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred ceeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccch
Confidence 6999999999999987753 5899999999999999999999 8999999999999999875 89999999998
Q ss_pred cccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 810 LISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
..... ....+|+.|+|||++.+.. +.++|||||||++|+|++|..||....
T Consensus 230 ~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~ 280 (681)
T 2pzi_A 230 RINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRY 280 (681)
T ss_dssp ETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEE
T ss_pred hcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccc
Confidence 76532 3456899999999987654 889999999999999999999987643
No 303
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1.4e-28 Score=266.90 Aligned_cols=225 Identities=20% Similarity=0.264 Sum_probs=182.3
Q ss_pred CceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecc
Q 047790 334 PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLN 413 (885)
Q Consensus 334 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 413 (885)
.++.|+|++|+++ .+|..+..+++|++|++++|.+. .+|..+..+++|++|+|++|+++ .+|..+..+++|++|+|+
T Consensus 82 ~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~ 158 (328)
T 4fcg_A 82 GRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIR 158 (328)
T ss_dssp TCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEE
T ss_pred ceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECC
Confidence 3555566666655 44555666777777777777777 66667777888888888888887 667788888888888888
Q ss_pred cccccCcCCCccCC---------CCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCC
Q 047790 414 SNFFDGIIPMEFGD---------CISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGS 484 (885)
Q Consensus 414 ~N~l~~~~p~~~~~---------l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 484 (885)
+|++.+.+|..+.. +++|++|+|++|+++ .+|..+..+++|++|+|++|++++
T Consensus 159 ~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-----------------~lp~~l~~l~~L~~L~L~~N~l~~- 220 (328)
T 4fcg_A 159 ACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-----------------SLPASIANLQNLKSLKIRNSPLSA- 220 (328)
T ss_dssp EETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-----------------CCCGGGGGCTTCCEEEEESSCCCC-
T ss_pred CCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-----------------cchHhhcCCCCCCEEEccCCCCCc-
Confidence 88877778777654 888999999888875 678888999999999999999984
Q ss_pred CCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccch
Q 047790 485 IPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPP 564 (885)
Q Consensus 485 ~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~ 564 (885)
+|+.+..+++|+.|++++|++.+.+ |..|+.+++|+.|+|+ +|.+.+.+|.
T Consensus 221 l~~~l~~l~~L~~L~Ls~n~~~~~~----------------p~~~~~l~~L~~L~L~-------------~n~~~~~~p~ 271 (328)
T 4fcg_A 221 LGPAIHHLPKLEELDLRGCTALRNY----------------PPIFGGRAPLKRLILK-------------DCSNLLTLPL 271 (328)
T ss_dssp CCGGGGGCTTCCEEECTTCTTCCBC----------------CCCTTCCCCCCEEECT-------------TCTTCCBCCT
T ss_pred CchhhccCCCCCEEECcCCcchhhh----------------HHHhcCCCCCCEEECC-------------CCCchhhcch
Confidence 7778899999999999999888755 7788889999999998 4555668899
Q ss_pred hccCcccccccccccccCCCCCCccccCccccceeecccCcCCC
Q 047790 565 ELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEG 608 (885)
Q Consensus 565 ~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~ 608 (885)
+++++++|++|+|++|++.+.+|..++++++|+.+++..|.+..
T Consensus 272 ~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~~ 315 (328)
T 4fcg_A 272 DIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQ 315 (328)
T ss_dssp TGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSCC
T ss_pred hhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHHH
Confidence 99999999999999999999999999999999999999887653
No 304
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=3.6e-30 Score=277.90 Aligned_cols=252 Identities=21% Similarity=0.245 Sum_probs=186.1
Q ss_pred ccccCCcceeeccccccCCCCCcccCCCCceeEEeecCcc-ccccCcccc-------CccccceeecccccccCCCcccc
Q 047790 306 FDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNF-TGVIPVSLW-------NSENLMEFNAASNLLEGSLSWEI 377 (885)
Q Consensus 306 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l-~~~~p~~~~-------~l~~L~~L~l~~N~l~~~~~~~~ 377 (885)
++..++|++|++++|.+ .+|..+... ++.|++++|++ ...+|..+. ++++|++|++++|.+++..|..+
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~-L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI-IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH-HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH-HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 44455566666666666 444433322 56666666666 334444444 57778888888888887777765
Q ss_pred --cccccccEEEccCCcccccCccccccc-----ccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEE
Q 047790 378 --SNAVALEKLDLSSNMLTRQIPKKIGNL-----TNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYL 450 (885)
Q Consensus 378 --~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l 450 (885)
..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..|..+++|++|+|++|++.+..
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~----- 189 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGER----- 189 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHH-----
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcch-----
Confidence 7888888888888888876 7777777 88999999999998888888889999999999988875321
Q ss_pred eecCCcccCCCchhc--ccCCCCCEEeccCccccC--CCC-CCcccccccceeeeccccceeccccccccccCCccCCCC
Q 047790 451 LLNNNMLSGKIPGSL--SRLTNLTTLNLFGNLLTG--SIP-PEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSV 525 (885)
Q Consensus 451 ~l~~n~l~~~~p~~l--~~l~~L~~L~Ls~N~l~~--~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~ 525 (885)
.+|..+ ..+++|++|+|++|++++ .++ ..+..+++|+.|++++|++++.+|
T Consensus 190 ---------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--------------- 245 (312)
T 1wwl_A 190 ---------GLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAG--------------- 245 (312)
T ss_dssp ---------HHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCC---------------
T ss_pred ---------HHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccc---------------
Confidence 123344 778889999999998873 122 233566889999999998886542
Q ss_pred CccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCc
Q 047790 526 PTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNR 605 (885)
Q Consensus 526 p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~ 605 (885)
...+..+++|+.|+|++|+++ .+|..+. ++|++|||++|+|++. |. +..+++|++|++++|+
T Consensus 246 ~~~~~~l~~L~~L~Ls~N~l~--------------~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~ 307 (312)
T 1wwl_A 246 APSCDWPSQLNSLNLSFTGLK--------------QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNP 307 (312)
T ss_dssp CSCCCCCTTCCEEECTTSCCS--------------SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCT
T ss_pred hhhhhhcCCCCEEECCCCccC--------------hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCC
Confidence 145566889999999966665 6677776 8999999999999864 76 8899999999999999
Q ss_pred CCC
Q 047790 606 LEG 608 (885)
Q Consensus 606 l~~ 608 (885)
+++
T Consensus 308 l~~ 310 (312)
T 1wwl_A 308 FLD 310 (312)
T ss_dssp TTC
T ss_pred CCC
Confidence 986
No 305
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=2.3e-28 Score=277.40 Aligned_cols=255 Identities=25% Similarity=0.252 Sum_probs=132.6
Q ss_pred cceeeccccccCCCCCcccCCCCceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCC
Q 047790 312 LSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSN 391 (885)
Q Consensus 312 L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N 391 (885)
...++.+++.++. +|..+. ..++.|+|++|++++..+..|.++++|++|++++|.+.+..+..|.++++|++|+|++|
T Consensus 45 ~~~v~c~~~~l~~-iP~~~~-~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 45 FSKVICVRKNLRE-VPDGIS-TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp SCEEECCSCCCSS-CCSCCC-TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CCEEEeCCCCcCc-CCCCCC-CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 4566777777663 343322 24666666666666665555555555555555555555555555555555555555555
Q ss_pred cccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCC
Q 047790 392 MLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNL 471 (885)
Q Consensus 392 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L 471 (885)
+++...+..|..+++|++|+|++|.++++.+..|..+++|++|++++|+.- ....+..|.++++|
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l---------------~~i~~~~~~~l~~L 187 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRL---------------SYISEGAFEGLSNL 187 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTC---------------CEECTTTTTTCSSC
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCc---------------ceeCcchhhccccc
Confidence 555444445555555555555555555444445555555555555543211 11122234444555
Q ss_pred CEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceee
Q 047790 472 TTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGL 551 (885)
Q Consensus 472 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l 551 (885)
+.|+|++|+++ .+| .+..+.+|+.|+|++|++++
T Consensus 188 ~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~-------------------------------------------- 221 (440)
T 3zyj_A 188 RYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSA-------------------------------------------- 221 (440)
T ss_dssp CEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCE--------------------------------------------
T ss_pred CeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCc--------------------------------------------
Confidence 55555555544 233 24444444444444444443
Q ss_pred eecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCC-ccccccccccccCCccc
Q 047790 552 YVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRS-GICQNLSIISLTGNKDL 630 (885)
Q Consensus 552 ~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~N~~~ 630 (885)
..|..|.++++|++|+|++|++++..|..+..+++|++|+|++|+|++.++.. ..+.+++.+++.+|||.
T Consensus 222 ---------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 222 ---------IRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp ---------ECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred ---------cChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 33444555555555555555555555555555555555555555555444332 33455556666666666
Q ss_pred cccccCCccccccc
Q 047790 631 CEKIMGSDCQILTF 644 (885)
Q Consensus 631 c~~~~~~~c~~~~~ 644 (885)
| ||...|+
T Consensus 293 C------dC~l~~l 300 (440)
T 3zyj_A 293 C------NCDILWL 300 (440)
T ss_dssp C------SSTTHHH
T ss_pred C------CCCchHH
Confidence 7 6766654
No 306
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=2.7e-28 Score=284.61 Aligned_cols=289 Identities=23% Similarity=0.270 Sum_probs=138.9
Q ss_pred CCCCCCCCCCcccCCcccc--------CCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCC
Q 047790 44 LSGWNKTTRHCHWFGVKCR--------HSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLK 115 (885)
Q Consensus 44 ~~~w~~~~~~c~w~gv~c~--------~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 115 (885)
.++|..+.+||.|.|..|. ...++.+++++++++ .+|. .+. ++|+
T Consensus 12 w~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~------------------------~l~--~~L~ 64 (622)
T 3g06_A 12 WSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPD------------------------CLP--AHIT 64 (622)
T ss_dssp HHHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCS------------------------CCC--TTCS
T ss_pred HHHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccCh------------------------hhC--CCCc
Confidence 3457777889999876432 223444444444444 3444 333 4455
Q ss_pred EEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccc
Q 047790 116 MLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNL 195 (885)
Q Consensus 116 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 195 (885)
+|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|. .+++|++|+|++|++++ +|. .+++|+.|++++|+
T Consensus 65 ~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~ 132 (622)
T 3g06_A 65 TLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQ 132 (622)
T ss_dssp EEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSC
T ss_pred EEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCC
Confidence 5555555544 2333 2445555555555554 2333 34455555555555542 222 33445555555555
Q ss_pred cCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCccc
Q 047790 196 LSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLS 275 (885)
Q Consensus 196 l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 275 (885)
++ .+|.. +++|++|++++|++++ +|.. +++|+.|+++.|.. ..+| ..+++|+.|++++|+++
T Consensus 133 l~-~lp~~----l~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l------~~l~---~~~~~L~~L~Ls~N~l~ 194 (622)
T 3g06_A 133 LT-SLPVL----PPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQL------TSLP---MLPSGLQELSVSDNQLA 194 (622)
T ss_dssp CS-CCCCC----CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCC------SCCC---CCCTTCCEEECCSSCCS
T ss_pred CC-cCCCC----CCCCCEEECcCCcCCC-cCCc---cCCCCEEECCCCCC------CCCc---ccCCCCcEEECCCCCCC
Confidence 54 34432 2455555555555542 1111 11111111111110 0011 11234555555555554
Q ss_pred ccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCccccC
Q 047790 276 GPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWN 355 (885)
Q Consensus 276 ~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~ 355 (885)
+ +|.. +++|+.|++++|.++..+. .+++ |+.|++++|++++. | ..
T Consensus 195 ~-l~~~---~~~L~~L~L~~N~l~~l~~----~~~~-----------------------L~~L~Ls~N~L~~l-p---~~ 239 (622)
T 3g06_A 195 S-LPTL---PSELYKLWAYNNRLTSLPA----LPSG-----------------------LKELIVSGNRLTSL-P---VL 239 (622)
T ss_dssp C-CCCC---CTTCCEEECCSSCCSSCCC----CCTT-----------------------CCEEECCSSCCSCC-C---CC
T ss_pred C-CCCc---cchhhEEECcCCcccccCC----CCCC-----------------------CCEEEccCCccCcC-C---CC
Confidence 3 2221 2344455555554443321 1234 44444444444432 2 22
Q ss_pred ccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCC
Q 047790 356 SENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCI 429 (885)
Q Consensus 356 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 429 (885)
+++|+.|++++|.|+.. |. .+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|.+++.+|..+..++
T Consensus 240 l~~L~~L~Ls~N~L~~l-p~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 240 PSELKELMVSGNRLTSL-PM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CCcCcEEECCCCCCCcC-Cc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 34555555555555532 22 3456777777777776 4566677777777777777777776666555444
No 307
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=2.6e-28 Score=277.97 Aligned_cols=255 Identities=24% Similarity=0.243 Sum_probs=134.3
Q ss_pred cceeeccccccCCCCCcccCCCCceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCC
Q 047790 312 LSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSN 391 (885)
Q Consensus 312 L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N 391 (885)
...++.+++.++. +|..+. ..++.|+|++|++++..|..|.++++|++|++++|.+.+..+..|.++++|++|+|++|
T Consensus 56 ~~~v~c~~~~l~~-iP~~~~-~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 56 FSKVVCTRRGLSE-VPQGIP-SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp SCEEECCSSCCSS-CCSCCC-TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CcEEEECCCCcCc-cCCCCC-CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 4566666666663 333222 14566666666666555555555555555555555555544445555555555555555
Q ss_pred cccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCC
Q 047790 392 MLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNL 471 (885)
Q Consensus 392 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L 471 (885)
++++..+..|..+++|++|+|++|+++++.+..|.++++|++|++++|
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~-------------------------------- 181 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGEL-------------------------------- 181 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCC--------------------------------
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCC--------------------------------
Confidence 555444444444555555555555554444444444455555544442
Q ss_pred CEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceee
Q 047790 472 TTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGL 551 (885)
Q Consensus 472 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l 551 (885)
|.+....+..|.++.+|+.|+|++|++++ +| .+..+++|+.|+|++|++
T Consensus 182 -------~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-----------------~~-~~~~l~~L~~L~Ls~N~l------ 230 (452)
T 3zyi_A 182 -------KKLEYISEGAFEGLFNLKYLNLGMCNIKD-----------------MP-NLTPLVGLEELEMSGNHF------ 230 (452)
T ss_dssp -------TTCCEECTTTTTTCTTCCEEECTTSCCSS-----------------CC-CCTTCTTCCEEECTTSCC------
T ss_pred -------CCccccChhhccCCCCCCEEECCCCcccc-----------------cc-cccccccccEEECcCCcC------
Confidence 22222222234455555555555555442 11 244555555555553333
Q ss_pred eecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCC-ccccccccccccCCccc
Q 047790 552 YVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRS-GICQNLSIISLTGNKDL 630 (885)
Q Consensus 552 ~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~N~~~ 630 (885)
++..|..|.++++|++|+|++|++++..|..+..+++|++|+|++|+|++.++.. ..+.+++.+++++|||.
T Consensus 231 -------~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 231 -------PEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp -------SEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred -------cccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 2334555555666666666666666555555666666666666666666544432 34555666667777777
Q ss_pred cccccCCccccccc
Q 047790 631 CEKIMGSDCQILTF 644 (885)
Q Consensus 631 c~~~~~~~c~~~~~ 644 (885)
| ||...|+
T Consensus 304 C------dC~~~~l 311 (452)
T 3zyi_A 304 C------DCDILWL 311 (452)
T ss_dssp C------STTTHHH
T ss_pred C------CCCchHH
Confidence 7 7777664
No 308
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=7.6e-31 Score=300.41 Aligned_cols=305 Identities=20% Similarity=0.181 Sum_probs=217.1
Q ss_pred CceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecc
Q 047790 334 PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLN 413 (885)
Q Consensus 334 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 413 (885)
.|+.|+|++|.+++..|..|..+++|+.|++++|.+.+..| |..+++|++|+|++|.|++..+ .++|+.|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 58888888888888877888888888888888888877665 7788888888888888875433 2778888888
Q ss_pred cccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcc-cc
Q 047790 414 SNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFG-DS 492 (885)
Q Consensus 414 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~-~l 492 (885)
+|.|++..+.. +++|+.|+|++|.++ +..|..+..+++|+.|+|++|.+++.+|..+. .+
T Consensus 108 ~N~l~~~~~~~---l~~L~~L~L~~N~l~----------------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l 168 (487)
T 3oja_A 108 NNNISRVSCSR---GQGKKNIYLANNKIT----------------MLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASS 168 (487)
T ss_dssp SSCCCCEEECC---CSSCEEEECCSSCCC----------------SGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGT
T ss_pred CCcCCCCCccc---cCCCCEEECCCCCCC----------------CCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhC
Confidence 88888765543 467778888777764 45677888899999999999999988888876 78
Q ss_pred cccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccc
Q 047790 493 LKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQL 572 (885)
Q Consensus 493 ~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L 572 (885)
++|+.|+|++|++++.. .+..+++|+.|+|++|+++ .+|+.++.+++|
T Consensus 169 ~~L~~L~Ls~N~l~~~~------------------~~~~l~~L~~L~Ls~N~l~--------------~~~~~~~~l~~L 216 (487)
T 3oja_A 169 DTLEHLNLQYNFIYDVK------------------GQVVFAKLKTLDLSSNKLA--------------FMGPEFQSAAGV 216 (487)
T ss_dssp TTCCEEECTTSCCCEEE------------------CCCCCTTCCEEECCSSCCC--------------EECGGGGGGTTC
T ss_pred CcccEEecCCCcccccc------------------ccccCCCCCEEECCCCCCC--------------CCCHhHcCCCCc
Confidence 89999999999998642 2335888999999966665 456678899999
Q ss_pred cccccccccCCCCCCccccCccccceeecccCcCC-CCCCC-Ccccccccccccc-------CCccccccccCCcccccc
Q 047790 573 EYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLE-GEVPR-SGICQNLSIISLT-------GNKDLCEKIMGSDCQILT 643 (885)
Q Consensus 573 ~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~-~~~p~-~~~~~~~~~~~~~-------~N~~~c~~~~~~~c~~~~ 643 (885)
++|+|++|+|++ +|..+..+++|+.|++++|++. +.+|. ...+..+..+++. +|+..| .|....
T Consensus 217 ~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~c------~~~~~~ 289 (487)
T 3oja_A 217 TWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEEC------TVPTLG 289 (487)
T ss_dssp SEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHHHHHHHTSSSSCCC------SSTTCE
T ss_pred cEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEeccccccccCCCcccc------cCCccc
Confidence 999999999984 8888999999999999999988 33332 3445555666665 777777 332211
Q ss_pred ccceeEEEeEeeceeeeeEEeecceecccCCceEEEEEeCCCCeEEEEEeccc--ccccHHHHHHHHHHhcccCCCCccc
Q 047790 644 FGKLALVGIVVGSVLVIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQA--TGQCDREFAAEMETLDMVKHQNLVQ 721 (885)
Q Consensus 644 ~~~~~~~g~~~g~~~~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~ 721 (885)
.. + .++.+..+.+|..+ .+++|+.... .....+.|..|++++.+++|+|+++
T Consensus 290 ~~---------~------------~~~~~~~~~~~~~~-----l~~~~~~~~~~~~~~g~~eF~~Eve~L~~i~HrNLV~ 343 (487)
T 3oja_A 290 HY---------G------------AYCCEDLPAPFADR-----LIALKRKEHALLSGQGSETERLECERENQARQREIDA 343 (487)
T ss_dssp EE---------T------------TEEECCCSCHHHHH-----HHHHHHHHHCSCC-----CHHHHHHHHHHHHHHHHHH
T ss_pred cc---------c------------ccccccccchhhhH-----HHHHHHHhhhhcccccHHHHHHHHHHHhcccccchhh
Confidence 00 0 01122222222111 1111111111 1223567999999999999999999
Q ss_pred eeeeeEeC
Q 047790 722 LLGYCSVG 729 (885)
Q Consensus 722 ~~~~~~~~ 729 (885)
+.+||...
T Consensus 344 L~gyC~s~ 351 (487)
T 3oja_A 344 LKEQYRTV 351 (487)
T ss_dssp HHHHTCCC
T ss_pred HHHHhcCh
Confidence 99998643
No 309
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=2.2e-28 Score=260.49 Aligned_cols=261 Identities=21% Similarity=0.212 Sum_probs=195.3
Q ss_pred cccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCcccccccccc
Q 047790 60 KCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLE 139 (885)
Q Consensus 60 ~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 139 (885)
.|.....+.++.++.+++ .+|..+ .++|++|+|++|.+++..+..|+.+++|++|+|++|++++..|..|+.+++|+
T Consensus 7 ~C~~~~~~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 83 (285)
T 1ozn_A 7 VCYNEPKVTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLE 83 (285)
T ss_dssp EEECSSSCEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred eECCCCCeEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCC
Confidence 344433355566666665 355433 46899999999999887778899999999999999999987788899999999
Q ss_pred EeeeeccC-CCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeec
Q 047790 140 TISLRSNS-FTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSN 218 (885)
Q Consensus 140 ~L~Ls~N~-l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~ 218 (885)
+|+|++|. ++...|..|..+++|++|++++|++++..|..|.++++|++|++++|+++ .+|...+..+++|++|++++
T Consensus 84 ~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~ 162 (285)
T 1ozn_A 84 QLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHG 162 (285)
T ss_dssp EEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCS
T ss_pred EEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCccc-ccCHhHhccCCCccEEECCC
Confidence 99999997 77666888899999999999999998887888889999999999999998 67766688888999999999
Q ss_pred ccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCC
Q 047790 219 NLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNML 298 (885)
Q Consensus 219 N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l 298 (885)
|++++..+.. +..+++|++|++++|++++..|..+..+++|++|++++|.+
T Consensus 163 n~l~~~~~~~-----------------------------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 213 (285)
T 1ozn_A 163 NRISSVPERA-----------------------------FRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNL 213 (285)
T ss_dssp SCCCEECTTT-----------------------------TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcccccCHHH-----------------------------hcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcC
Confidence 8887433322 44556777777788888777777788888888888888888
Q ss_pred cCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCccc
Q 047790 299 SGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSL 353 (885)
Q Consensus 299 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~ 353 (885)
++.++..+..+++|++|++++|.+....+.......++.+..+.+.+....|..+
T Consensus 214 ~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 214 SALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp SCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEESGGG
T ss_pred CcCCHHHcccCcccCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCCchHh
Confidence 8777777777888888888888776433221000013333445555555555443
No 310
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=6.7e-31 Score=310.74 Aligned_cols=417 Identities=12% Similarity=0.066 Sum_probs=311.5
Q ss_pred CcEEEEEEecccc---cccccccc------------cCCCCCCEEecCCCcccCcCCcCccCc--CCCCEEeccCCc-CC
Q 047790 64 SRVVSLVIQTQSL---KGPVSPFL------------FNLSSLRILDLSKNLLFGQLSPQVSNL--KRLKMLSVGENQ-LS 125 (885)
Q Consensus 64 ~~v~~l~l~~~~l---~g~~~~~l------------~~l~~L~~L~Ls~n~l~~~~~~~~~~l--~~L~~L~L~~n~-l~ 125 (885)
.++..++++++.. .|.+|... ..+++|++|+|++|.+++..+..++.. ++|++|+|++|. ++
T Consensus 73 ~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~ 152 (592)
T 3ogk_B 73 PNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFT 152 (592)
T ss_dssp TTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEE
T ss_pred CCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcC
Confidence 3688889877422 12333222 278999999999999988777777774 459999999987 22
Q ss_pred C-CCCccccccccccEeeeeccCCCCC----CCccccCCccCceEEccCCcCCc----cCCcccCCCCCCcccccccccc
Q 047790 126 G-SIPSQLGLLTRLETISLRSNSFTGE----MPSELGDIKQLKSLDFSGNGLNG----TIPSRLGDLTQLQDLDLSDNLL 196 (885)
Q Consensus 126 ~-~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l 196 (885)
. .++.....+++|++|+|++|.+++. ++..+..+++|++|++++|.+++ .++..+.++++|++|++++|.+
T Consensus 153 ~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~ 232 (592)
T 3ogk_B 153 TDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEI 232 (592)
T ss_dssp HHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBG
T ss_pred HHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccH
Confidence 1 1223334789999999999998866 33345678999999999999973 3445567889999999999999
Q ss_pred CCCCCcccccccccccEEEeecccCc---ccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCc
Q 047790 197 SGSLPVSLLKNLQSLSYLDVSNNLLS---GNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNK 273 (885)
Q Consensus 197 ~~~~p~~~~~~l~~L~~L~Ls~N~l~---~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~ 273 (885)
. .+|. .+..+++|++|++++.... +..+..+..+++|+.+.+.... .+.+|..+..+++|++|++++|.
T Consensus 233 ~-~l~~-~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~------~~~l~~~~~~~~~L~~L~Ls~~~ 304 (592)
T 3ogk_B 233 L-ELVG-FFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG------PNEMPILFPFAAQIRKLDLLYAL 304 (592)
T ss_dssp G-GGHH-HHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC------TTTGGGGGGGGGGCCEEEETTCC
T ss_pred H-HHHH-HHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccc------hhHHHHHHhhcCCCcEEecCCCc
Confidence 8 5774 4889999999999864433 3455677888999999885432 45677888899999999999999
Q ss_pred cccccc-ccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccc-----------cccCCCCCcc-cCCC-CceeEE
Q 047790 274 LSGPIP-RELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVN-----------NRISGSIPEY-ISEL-PLKVFD 339 (885)
Q Consensus 274 l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~-----------N~l~~~~p~~-~~~~-~L~~L~ 339 (885)
+++... ..+..+++|++|+++++...+.++..+..+++|++|++++ |.+++..... .... .|+.|+
T Consensus 305 l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~ 384 (592)
T 3ogk_B 305 LETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMA 384 (592)
T ss_dssp CCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEE
T ss_pred CCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEE
Confidence 876544 4467899999999994433334455567889999999993 5665432222 2223 799999
Q ss_pred eecCccccccCccccC-ccccceeecc----cccccCC-----CcccccccccccEEEccCC--cccccCcccccc-ccc
Q 047790 340 LQYNNFTGVIPVSLWN-SENLMEFNAA----SNLLEGS-----LSWEISNAVALEKLDLSSN--MLTRQIPKKIGN-LTN 406 (885)
Q Consensus 340 Ls~N~l~~~~p~~~~~-l~~L~~L~l~----~N~l~~~-----~~~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~~-l~~ 406 (885)
++.|++++..+..+.. +++|+.|+++ .|.+++. ++..+.++++|++|++++| .+++..+..+.. +++
T Consensus 385 l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~ 464 (592)
T 3ogk_B 385 VYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPN 464 (592)
T ss_dssp EEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTT
T ss_pred eecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCcc
Confidence 9999999888777765 8899999996 6778764 3444777999999999854 477666666654 889
Q ss_pred ccceecccccccC-cCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCC
Q 047790 407 IQILKLNSNFFDG-IIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSI 485 (885)
Q Consensus 407 L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 485 (885)
|+.|++++|.+++ .++..+..+++|++|++++|.+++ ..++..+..+++|+.|+|++|++++.-
T Consensus 465 L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~---------------~~~~~~~~~l~~L~~L~ls~n~it~~~ 529 (592)
T 3ogk_B 465 VRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSE---------------RAIAAAVTKLPSLRYLWVQGYRASMTG 529 (592)
T ss_dssp CCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBH---------------HHHHHHHHHCSSCCEEEEESCBCCTTC
T ss_pred ceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcH---------------HHHHHHHHhcCccCeeECcCCcCCHHH
Confidence 9999999999986 345667889999999999998752 134555678999999999999998653
Q ss_pred CCCc-ccccccceeeeccc
Q 047790 486 PPEF-GDSLKVQGLYLGHN 503 (885)
Q Consensus 486 p~~~-~~l~~L~~L~Ls~N 503 (885)
...+ ..++.+....+..+
T Consensus 530 ~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 530 QDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp TTGGGGCCTTEEEEEECCC
T ss_pred HHHHHHhCCCcEEEEecCc
Confidence 3333 24555555555543
No 311
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.95 E-value=8.3e-30 Score=278.51 Aligned_cols=194 Identities=16% Similarity=0.137 Sum_probs=159.8
Q ss_pred eeeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccc--------cccHHHHHHHHHHhcccC---------CCCcc
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQAT--------GQCDREFAAEMETLDMVK---------HQNLV 720 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~--------~~~~~~~~~E~~~l~~l~---------~~~i~ 720 (885)
+...+|++.++||+|+||.||+|++ +++.||+|++.... ....+.+.+|+++++.++ ||||+
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv 95 (336)
T 2vuw_A 17 LPTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFI 95 (336)
T ss_dssp SCHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBC
T ss_pred cccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchh
Confidence 3456799999999999999999988 67999999997543 223377889999998886 55555
Q ss_pred ceee-----------------eeEe-------------CCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHH
Q 047790 721 QLLG-----------------YCSV-------------GEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARG 770 (885)
Q Consensus 721 ~~~~-----------------~~~~-------------~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~ 770 (885)
++.+ ++.+ +...|+||||+++|++.+.+.+ ..+++..++.++.|++.|
T Consensus 96 ~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 96 GLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp CEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHH
T ss_pred hhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHH
Confidence 5554 4433 6789999999999976666643 448999999999999999
Q ss_pred HHHHhccCCCCceecCCCCCcEEEcCCC--------------------cEEEeeccCcccccCCCCCcccCCCCCCccCC
Q 047790 771 ISFLHHGFKPYIIHMDIKTSNILLNDYF--------------------EAKVSDFGLARLISDCESHVSTDTADTIGYVP 830 (885)
Q Consensus 771 l~~LH~~~~~~i~H~dlkp~Nil~~~~~--------------------~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~a 830 (885)
++|||+ +.||+||||||+||+++.++ .+||+|||+|+..... ...+|+.|+|
T Consensus 174 L~~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~a 245 (336)
T 2vuw_A 174 LAVAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMD 245 (336)
T ss_dssp HHHHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTC
T ss_pred HHHHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccC
Confidence 999993 37899999999999999876 8999999999876532 3468999999
Q ss_pred cccccCCCCCCcchhHHHHHH-HHHHHhCCCCCC
Q 047790 831 SEYGQAGRANERGDIYSFGVI-LLELVTGKQPTG 863 (885)
Q Consensus 831 PE~~~~~~~~~~~DvwslGvv-l~elltg~~P~~ 863 (885)
||++.+.. +.++||||++++ .+++++|..||.
T Consensus 246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred hhhhcCCC-ccceehhhhhCCCCcccccccCCCc
Confidence 99998777 889999998777 778999999985
No 312
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=9.7e-28 Score=272.19 Aligned_cols=240 Identities=20% Similarity=0.251 Sum_probs=188.1
Q ss_pred cccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCC
Q 047790 73 TQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEM 152 (885)
Q Consensus 73 ~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 152 (885)
+.+++ .+|..+. +++++|+|++|.+++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++..
T Consensus 52 ~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~ 128 (440)
T 3zyj_A 52 RKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIP 128 (440)
T ss_dssp SCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCC
T ss_pred CCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeC
Confidence 33443 4665554 68899999999998888889999999999999999999777788999999999999999999776
Q ss_pred CccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCC
Q 047790 153 PSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNL 232 (885)
Q Consensus 153 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 232 (885)
+..|..+++|++|+|++|+++...+..|.++++|++|+|++|+..+.++...|.++++|++|++++|+++. +|
T Consensus 129 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~------ 201 (440)
T 3zyj_A 129 NGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP------ 201 (440)
T ss_dssp TTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC------
T ss_pred HhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc------
Confidence 77889999999999999999977777889999999999998655557888778888999999999988862 22
Q ss_pred CcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCc
Q 047790 233 KKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNL 312 (885)
Q Consensus 233 ~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 312 (885)
.+..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|
T Consensus 202 ------------------------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 257 (440)
T 3zyj_A 202 ------------------------NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSL 257 (440)
T ss_dssp ------------------------CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTC
T ss_pred ------------------------ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCC
Confidence 13455678888888888887777788888888888888888887777777777777
Q ss_pred ceeeccccccCCCCCcccCCC-CceeEEeecCccc
Q 047790 313 SELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFT 346 (885)
Q Consensus 313 ~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~ 346 (885)
++|+|++|++++..+..+..+ .|+.|+|++|.+.
T Consensus 258 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 258 VEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred CEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 777777777776555554444 4555555555443
No 313
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=8.4e-30 Score=275.08 Aligned_cols=109 Identities=17% Similarity=0.157 Sum_probs=56.2
Q ss_pred cCCCCCcEEEecCCcccc--ccc-ccccCCCCCcEEEccCCCCcCccc-ccccccCCcceeeccccccCCCCCcccCCCC
Q 047790 259 GNCSMLKYISLSNNKLSG--PIP-RELCNSGSLVEINLDGNMLSGTIE-DVFDRCTNLSELVLVNNRISGSIPEYISELP 334 (885)
Q Consensus 259 ~~l~~L~~L~Ls~N~l~~--~~p-~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 334 (885)
..+++|++|++++|++++ .++ ..+..+++|++|+|++|++++.+| ..+..+++|++|+|++|+|+ .+|..
T Consensus 198 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~----- 271 (312)
T 1wwl_A 198 LKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKG----- 271 (312)
T ss_dssp TSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSS-----
T ss_pred ccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhh-----
Confidence 445566666666666652 111 223344555555555555555442 33444555555555555555 33332
Q ss_pred ceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccc
Q 047790 335 LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTR 395 (885)
Q Consensus 335 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 395 (885)
+. ++|++|++++|+|++. |. +..+++|++|+|++|++++
T Consensus 272 ------------------~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 272 ------------------LP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp ------------------CC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred ------------------cc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 22 4444555555555444 33 5566666667777776654
No 314
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.95 E-value=3.1e-28 Score=273.18 Aligned_cols=197 Identities=14% Similarity=0.144 Sum_probs=154.8
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc---ccHHHHHHHHHHhcccCC-CCccceee-----------
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG---QCDREFAAEMETLDMVKH-QNLVQLLG----------- 724 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~---~~~~~~~~E~~~l~~l~~-~~i~~~~~----------- 724 (885)
..|..+++||+|+||.||+|++. +++.||+|++..... ...+.+.+|+.+++.++| ++......
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 45888999999999999999854 589999999873322 235779999999999987 32221111
Q ss_pred ----------eeEe-----CCeeEEEEecccCCCHHHHHhh------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCce
Q 047790 725 ----------YCSV-----GEEKLLVYEYMVNGSLDDWLRN------RAASLDWGKRCKIAYGAARGISFLHHGFKPYII 783 (885)
Q Consensus 725 ----------~~~~-----~~~~~lv~e~~~~~sL~~~l~~------~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~ 783 (885)
++.. ....+++|+++ +++|.++++. ....+++..+..++.|++.|++||| +.||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence 1111 12356777766 6799998852 2334777889999999999999999 89999
Q ss_pred ecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccc----------cCCCCCCcchhHHHHHHHH
Q 047790 784 HMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYG----------QAGRANERGDIYSFGVILL 853 (885)
Q Consensus 784 H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~----------~~~~~~~~~DvwslGvvl~ 853 (885)
||||||+||+++.++.+||+|||+++..... .....+ +.|+|||++ .+..++.++|||||||++|
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 9999999999999999999999998875432 233456 999999998 5566888999999999999
Q ss_pred HHHhCCCCCCCCC
Q 047790 854 ELVTGKQPTGPEF 866 (885)
Q Consensus 854 elltg~~P~~~~~ 866 (885)
||++|+.||....
T Consensus 309 elltg~~Pf~~~~ 321 (413)
T 3dzo_A 309 WIWCADLPNTDDA 321 (413)
T ss_dssp HHHHSSCCCCTTG
T ss_pred HHHHCCCCCCCcc
Confidence 9999999998653
No 315
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=1.8e-29 Score=273.22 Aligned_cols=268 Identities=20% Similarity=0.179 Sum_probs=170.0
Q ss_pred CCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeec
Q 047790 263 MLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQY 342 (885)
Q Consensus 263 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~ 342 (885)
.++..+++.+.+....+..+..+++|++|+|++|++++.++..|..+++|++|+|++|++++..+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--------------- 75 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--------------- 75 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE---------------
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh---------------
Confidence 45666777777765555555556677777777777777766677777777777777776654332
Q ss_pred CccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCC
Q 047790 343 NNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIP 422 (885)
Q Consensus 343 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 422 (885)
+..+++|++|++++|.+++.. ..++|++|++++|++++..+.. +++|+.|++++|++++..|
T Consensus 76 ----------~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~ 137 (317)
T 3o53_A 76 ----------LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRD 137 (317)
T ss_dssp ----------ETTCTTCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGG
T ss_pred ----------hhhcCCCCEEECcCCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccc
Confidence 334444444555544444322 2256666666666666554433 4566777777777776666
Q ss_pred CccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhc-ccCCCCCEEeccCccccCCCCCCcccccccceeeec
Q 047790 423 MEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSL-SRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLG 501 (885)
Q Consensus 423 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 501 (885)
..+..+++|++|++++|++++ ..|..+ ..+++|++|+|++|++++. |. ...+++|+.|+++
T Consensus 138 ~~~~~l~~L~~L~Ls~N~l~~----------------~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls 199 (317)
T 3o53_A 138 LDEGCRSRVQYLDLKLNEIDT----------------VNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLS 199 (317)
T ss_dssp BCTGGGSSEEEEECTTSCCCE----------------EEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECC
T ss_pred hhhhccCCCCEEECCCCCCCc----------------ccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECC
Confidence 666667777777777666642 223333 3567777777777777643 32 2236677777777
Q ss_pred cccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCccccccccccccc
Q 047790 502 HNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNM 581 (885)
Q Consensus 502 ~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~ 581 (885)
+|++++. |..|..+++|+.|+|++|+++ .+|..+..+++|++|++++|+
T Consensus 200 ~N~l~~l-----------------~~~~~~l~~L~~L~L~~N~l~--------------~l~~~~~~l~~L~~L~l~~N~ 248 (317)
T 3o53_A 200 SNKLAFM-----------------GPEFQSAAGVTWISLRNNKLV--------------LIEKALRFSQNLEHFDLRGNG 248 (317)
T ss_dssp SSCCCEE-----------------CGGGGGGTTCSEEECTTSCCC--------------EECTTCCCCTTCCEEECTTCC
T ss_pred CCcCCcc-----------------hhhhcccCcccEEECcCCccc--------------chhhHhhcCCCCCEEEccCCC
Confidence 7777632 444677777777777765554 456677777777777777777
Q ss_pred CC-CCCCccccCccccceeecc-cCcCCCCCCC
Q 047790 582 LD-GHIPEKLCSLPYLLYLNLA-DNRLEGEVPR 612 (885)
Q Consensus 582 l~-~~ip~~l~~l~~L~~L~l~-~N~l~~~~p~ 612 (885)
++ +.+|..+..++.|+.|+++ .+.++|..|.
T Consensus 249 ~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 249 FHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp CBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred ccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 77 6677777777777777777 4456665543
No 316
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=5.7e-28 Score=257.38 Aligned_cols=231 Identities=24% Similarity=0.221 Sum_probs=113.2
Q ss_pred ccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceeccccc-ccCcCCCccCCCCcccEEEc
Q 047790 358 NLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNF-FDGIIPMEFGDCISLNTLDL 436 (885)
Q Consensus 358 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L 436 (885)
++++|++++|.+.+..+..|..+++|++|+|++|++++..|..|..+++|++|++++|. ++...|..|..+++|++|++
T Consensus 33 ~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l 112 (285)
T 1ozn_A 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (285)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEEC
Confidence 33444444444443333444444455555555555554445555555555555555554 44444455555555555555
Q ss_pred CCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccc
Q 047790 437 GSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYL 516 (885)
Q Consensus 437 s~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 516 (885)
++|+++ +..|..+..+++|++|++++|++++..+..|..+++|+.|++++|++++..
T Consensus 113 ~~n~l~----------------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~------- 169 (285)
T 1ozn_A 113 DRCGLQ----------------ELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP------- 169 (285)
T ss_dssp TTSCCC----------------CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC-------
T ss_pred CCCcCC----------------EECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccC-------
Confidence 555442 223444555555555555555555444444555555555555555554322
Q ss_pred cCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCcccc
Q 047790 517 SGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYL 596 (885)
Q Consensus 517 s~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L 596 (885)
+..|..+++|+.|+|++|++ ++..|..++++++|++|++++|++++..|..+..+++|
T Consensus 170 ---------~~~~~~l~~L~~L~l~~n~l-------------~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 227 (285)
T 1ozn_A 170 ---------ERAFRGLHSLDRLLLHQNRV-------------AHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRAL 227 (285)
T ss_dssp ---------TTTTTTCTTCCEEECCSSCC-------------CEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTC
T ss_pred ---------HHHhcCccccCEEECCCCcc-------------cccCHhHccCcccccEeeCCCCcCCcCCHHHcccCccc
Confidence 23455555555555553332 23335555555555555555555554333445555555
Q ss_pred ceeecccCcCCCCCCCCccccccccccccCCcccccc
Q 047790 597 LYLNLADNRLEGEVPRSGICQNLSIISLTGNKDLCEK 633 (885)
Q Consensus 597 ~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~ 633 (885)
++|++++|++.+..+.....+.++......|...|..
T Consensus 228 ~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~ 264 (285)
T 1ozn_A 228 QYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSL 264 (285)
T ss_dssp CEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEE
T ss_pred CEEeccCCCccCCCCcHHHHHHHHhcccccCccccCC
Confidence 5566665555554443333333333444444555543
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=4e-29 Score=270.40 Aligned_cols=254 Identities=23% Similarity=0.245 Sum_probs=193.6
Q ss_pred cccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCce
Q 047790 257 EIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLK 336 (885)
Q Consensus 257 ~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~ 336 (885)
.+..+++|++|++++|++++..|..+..+++|++|+|++|.+++.++ +..+++|++|++++|++++..+. ..|+
T Consensus 29 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~~----~~L~ 102 (317)
T 3o53_A 29 LRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG----PSIE 102 (317)
T ss_dssp HHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEEC----TTCC
T ss_pred HhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccCC----CCcC
Confidence 34567899999999999999888999999999999999999998776 88999999999999998753321 2466
Q ss_pred eEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceeccccc
Q 047790 337 VFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNF 416 (885)
Q Consensus 337 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 416 (885)
+|++++|++++..+. . +++|++|++++|++++..+..+..+++|++|+|++|.
T Consensus 103 ~L~l~~n~l~~~~~~------------------------~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 155 (317)
T 3o53_A 103 TLHAANNNISRVSCS------------------------R---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNE 155 (317)
T ss_dssp EEECCSSCCSEEEEC------------------------C---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSC
T ss_pred EEECCCCccCCcCcc------------------------c---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCC
Confidence 666666665544322 2 3457777777777777777777777788888888888
Q ss_pred ccCcCCCccC-CCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCccccccc
Q 047790 417 FDGIIPMEFG-DCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKV 495 (885)
Q Consensus 417 l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 495 (885)
+++..+..+. .+++|++|+|++|++++. |. ...+++|++|+|++|++++ +|+.+..+++|
T Consensus 156 l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-----------------~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L 216 (317)
T 3o53_A 156 IDTVNFAELAASSDTLEHLNLQYNFIYDV-----------------KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGV 216 (317)
T ss_dssp CCEEEGGGGGGGTTTCCEEECTTSCCCEE-----------------EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTC
T ss_pred CCcccHHHHhhccCcCCEEECCCCcCccc-----------------cc-ccccccCCEEECCCCcCCc-chhhhcccCcc
Confidence 8776666653 677888888888877522 21 2247788888888888884 55568888888
Q ss_pred ceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCccccccc
Q 047790 496 QGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYL 575 (885)
Q Consensus 496 ~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L 575 (885)
+.|++++|++++ +|..+..+++|+.|+|++|++. .+.+|..++.+++|+.|
T Consensus 217 ~~L~L~~N~l~~-----------------l~~~~~~l~~L~~L~l~~N~~~------------~~~~~~~~~~~~~L~~l 267 (317)
T 3o53_A 217 TWISLRNNKLVL-----------------IEKALRFSQNLEHFDLRGNGFH------------CGTLRDFFSKNQRVQTV 267 (317)
T ss_dssp SEEECTTSCCCE-----------------ECTTCCCCTTCCEEECTTCCCB------------HHHHHHHHHTCHHHHHH
T ss_pred cEEECcCCcccc-----------------hhhHhhcCCCCCEEEccCCCcc------------CcCHHHHHhccccceEE
Confidence 899998888872 3667888899999999966553 14678889999999999
Q ss_pred ccc-cccCCCCCCcccc
Q 047790 576 DFS-MNMLDGHIPEKLC 591 (885)
Q Consensus 576 ~Ls-~N~l~~~ip~~l~ 591 (885)
+++ .+.++|..|....
T Consensus 268 ~l~~~~~l~~~~~~~~~ 284 (317)
T 3o53_A 268 AKQTVKKLTGQNEEECT 284 (317)
T ss_dssp HHHHHHHHHSSSSCCCS
T ss_pred ECCCchhccCCchhccC
Confidence 999 5577776665443
No 318
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.95 E-value=1.6e-27 Score=255.86 Aligned_cols=175 Identities=23% Similarity=0.306 Sum_probs=149.9
Q ss_pred eeEEeec-ceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHh-cccCCCCccceeeeeEe----CCee
Q 047790 660 IAIIVFE-NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETL-DMVKHQNLVQLLGYCSV----GEEK 732 (885)
Q Consensus 660 ~~~~~~~-~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l-~~l~~~~i~~~~~~~~~----~~~~ 732 (885)
..+|.+. +.||+|+||.||+|.+. +++.||+|++.. .....+|++++ +..+||||+++++++.. +...
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 3446665 88999999999999874 588999999854 34667888887 56689999999999876 6678
Q ss_pred EEEEecccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC---CCcEEEeeccCc
Q 047790 733 LLVYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND---YFEAKVSDFGLA 808 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~---~~~vkl~Dfg~a 808 (885)
++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++. ++.++|+|||.+
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 99999999999999998643 35899999999999999999999 899999999999999997 788999999998
Q ss_pred ccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 809 RLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.... +..++.++||||+||++|||++|+.||...
T Consensus 168 ~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~ 201 (299)
T 3m2w_A 168 KETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSN 201 (299)
T ss_dssp EECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-
T ss_pred cccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 6532 234677899999999999999999999643
No 319
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=6.1e-27 Score=273.22 Aligned_cols=263 Identities=22% Similarity=0.243 Sum_probs=201.0
Q ss_pred CCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEee
Q 047790 262 SMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQ 341 (885)
Q Consensus 262 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls 341 (885)
.+++.|++++|.++ .+|..+. ++|++|+|++|.|+.+++ .+++|++|+|++|+|++ +|. ...+|++|+++
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~~-lp~--~l~~L~~L~Ls 109 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLTS-LPV--LPPGLLELSIF 109 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSCCCC----CCTTCCEEEECSCCCSC-CCC--CCTTCCEEEEC
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCCCCC----cCCCCCEEEcCCCcCCc-CCC--CCCCCCEEECc
Confidence 35888888888888 6677664 788899999998886554 46888899999998885 444 22368889999
Q ss_pred cCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcC
Q 047790 342 YNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGII 421 (885)
Q Consensus 342 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 421 (885)
+|++++..+ .+++|+.|++++|++++.. .. +++|++|+|++|++++ +|. .+++|+.|++++|.|++ +
T Consensus 110 ~N~l~~l~~----~l~~L~~L~L~~N~l~~lp-~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l 176 (622)
T 3g06_A 110 SNPLTHLPA----LPSGLCKLWIFGNQLTSLP-VL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-L 176 (622)
T ss_dssp SCCCCCCCC----CCTTCCEEECCSSCCSCCC-CC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-C
T ss_pred CCcCCCCCC----CCCCcCEEECCCCCCCcCC-CC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-C
Confidence 998887544 5678888899998888643 32 3789999999999885 343 34678889999999986 4
Q ss_pred CCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeec
Q 047790 422 PMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLG 501 (885)
Q Consensus 422 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 501 (885)
| ..+++|+.|++++|+|+ .+|.. +++|+.|++++|.++ .+|.. +++|+.|+++
T Consensus 177 ~---~~~~~L~~L~Ls~N~l~-----------------~l~~~---~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls 229 (622)
T 3g06_A 177 P---MLPSGLQELSVSDNQLA-----------------SLPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVS 229 (622)
T ss_dssp C---CCCTTCCEEECCSSCCS-----------------CCCCC---CTTCCEEECCSSCCS-SCCCC---CTTCCEEECC
T ss_pred c---ccCCCCcEEECCCCCCC-----------------CCCCc---cchhhEEECcCCccc-ccCCC---CCCCCEEEcc
Confidence 5 45678889999988886 23332 367888999999888 46653 3678889999
Q ss_pred cccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCccccccccccccc
Q 047790 502 HNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNM 581 (885)
Q Consensus 502 ~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~ 581 (885)
+|++++ + | ..+++|+.|+|++|+|+ .+|. .+++|++|+|++|+
T Consensus 230 ~N~L~~-l----------------p---~~l~~L~~L~Ls~N~L~--------------~lp~---~~~~L~~L~Ls~N~ 272 (622)
T 3g06_A 230 GNRLTS-L----------------P---VLPSELKELMVSGNRLT--------------SLPM---LPSGLLSLSVYRNQ 272 (622)
T ss_dssp SSCCSC-C----------------C---CCCTTCCEEECCSSCCS--------------CCCC---CCTTCCEEECCSSC
T ss_pred CCccCc-C----------------C---CCCCcCcEEECCCCCCC--------------cCCc---ccccCcEEeCCCCC
Confidence 998873 2 4 34578889999977765 4555 46788899999999
Q ss_pred CCCCCCccccCccccceeecccCcCCCCCCC
Q 047790 582 LDGHIPEKLCSLPYLLYLNLADNRLEGEVPR 612 (885)
Q Consensus 582 l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~ 612 (885)
|+ .+|..+..+++|+.|+|++|++++.+|.
T Consensus 273 L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 273 LT-RLPESLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp CC-SCCGGGGGSCTTCEEECCSCCCCHHHHH
T ss_pred CC-cCCHHHhhccccCEEEecCCCCCCcCHH
Confidence 98 7888888999999999999998876654
No 320
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=3e-26 Score=241.82 Aligned_cols=168 Identities=26% Similarity=0.309 Sum_probs=94.1
Q ss_pred CCCcccCCccccCC-cEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCC
Q 047790 51 TRHCHWFGVKCRHS-RVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIP 129 (885)
Q Consensus 51 ~~~c~w~gv~c~~~-~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p 129 (885)
.++|.|.|+.|... .++.+++++++++ .+|..+. ++|++|+|++|.+++..+..|+++++|++|+|++|+++...+
T Consensus 2 ~~~C~~~~~~C~c~~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~ 78 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPA 78 (270)
T ss_dssp CCCBGGGTCSBEEETTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCT
T ss_pred CccCCCCCCCCEeCCCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeCh
Confidence 47899999999753 3455566665555 2444332 455566666665555444455555555555555555554433
Q ss_pred ccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccc
Q 047790 130 SQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQ 209 (885)
Q Consensus 130 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~ 209 (885)
..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+++ .+|...|..++
T Consensus 79 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~ 157 (270)
T 2o6q_A 79 GIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLT 157 (270)
T ss_dssp TTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCT
T ss_pred hhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCC-ccCHhHccCCc
Confidence 44455555555555555555444445555555555555555555544445555555555555555554 44444445555
Q ss_pred cccEEEeecccCc
Q 047790 210 SLSYLDVSNNLLS 222 (885)
Q Consensus 210 ~L~~L~Ls~N~l~ 222 (885)
+|++|++++|+++
T Consensus 158 ~L~~L~L~~n~l~ 170 (270)
T 2o6q_A 158 SLKELRLYNNQLK 170 (270)
T ss_dssp TCCEEECCSSCCS
T ss_pred ccceeEecCCcCc
Confidence 5555555555444
No 321
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=4.7e-30 Score=303.69 Aligned_cols=459 Identities=14% Similarity=0.132 Sum_probs=236.2
Q ss_pred CCcccCCccccCCcEEEEEEeccccccccc-ccccCCCCCCEEecCCCcccC---cCCcC------------ccCcCCCC
Q 047790 52 RHCHWFGVKCRHSRVVSLVIQTQSLKGPVS-PFLFNLSSLRILDLSKNLLFG---QLSPQ------------VSNLKRLK 115 (885)
Q Consensus 52 ~~c~w~gv~c~~~~v~~l~l~~~~l~g~~~-~~l~~l~~L~~L~Ls~n~l~~---~~~~~------------~~~l~~L~ 115 (885)
-|++|.++... ....+++.... +..+ ..+..+++|++|+|+++.... ..|.. ...+++|+
T Consensus 33 vck~W~~~~~~--~~~~l~~~~~~--~~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~ 108 (594)
T 2p1m_B 33 VCKSWYEIERW--CRRKVFIGNCY--AVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLE 108 (594)
T ss_dssp SCHHHHHHHHH--HCCEEEESSTT--SSCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred HHHHHHHhhhh--hceEEeecccc--ccCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCC
Confidence 46678888322 23344554432 2223 246678899999999975322 12222 24577888
Q ss_pred EEeccCCcCCCCCCcccc-ccccccEeeeecc-CCCCC-CCccccCCccCceEEccCCcCCccCCccc----CCCCCCcc
Q 047790 116 MLSVGENQLSGSIPSQLG-LLTRLETISLRSN-SFTGE-MPSELGDIKQLKSLDFSGNGLNGTIPSRL----GDLTQLQD 188 (885)
Q Consensus 116 ~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~N-~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~----~~l~~L~~ 188 (885)
+|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+..+++|++|+|++|.+++..+..+ ..+++|++
T Consensus 109 ~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~ 188 (594)
T 2p1m_B 109 EIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVS 188 (594)
T ss_dssp EEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCE
T ss_pred eEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcE
Confidence 899988888876666665 6788888888888 55432 34444578888888888888775544333 35668888
Q ss_pred ccccccccCCCCCccc----ccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCC
Q 047790 189 LDLSDNLLSGSLPVSL----LKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSML 264 (885)
Q Consensus 189 L~Ls~N~l~~~~p~~~----~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L 264 (885)
|++++|. +.++... ...+++|++|++++|.-.+.+|..+.++++|+.|.++.+..
T Consensus 189 L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~------------------- 247 (594)
T 2p1m_B 189 LNISCLA--SEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTA------------------- 247 (594)
T ss_dssp EECTTCC--SCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCC-------------------
T ss_pred EEecccC--CcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccC-------------------
Confidence 8888886 1333222 23457888888887732222555555566666665532210
Q ss_pred cEEEecCCcccccccccccCCCCCcEE-EccCCCCcCcccccccccCCcceeeccccccCCCCCc-ccCCC-CceeEEee
Q 047790 265 KYISLSNNKLSGPIPRELCNSGSLVEI-NLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPE-YISEL-PLKVFDLQ 341 (885)
Q Consensus 265 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L-~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~~-~L~~L~Ls 341 (885)
+++.+.+.+ ++..+.++++|+.| .+.+... ...+..+..+++|++|++++|.+++.... .+... .|+.|+++
T Consensus 248 ---~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~ 322 (594)
T 2p1m_B 248 ---EVRPDVYSG-LSVALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVL 322 (594)
T ss_dssp ---CCCHHHHHH-HHHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEE
T ss_pred ---ccchhhHHH-HHHHHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCc
Confidence 011222222 22234444444444 2221111 12223333445555555555554321111 01111 34444444
Q ss_pred cCccccccCccccCccccceeecccccccCCCcccccccccccEEEc---------cCCcccccCccccc-cccccccee
Q 047790 342 YNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDL---------SSNMLTRQIPKKIG-NLTNIQILK 411 (885)
Q Consensus 342 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L---------s~N~l~~~~p~~~~-~l~~L~~L~ 411 (885)
+| ++... ++.....+++|++|++ +.+.+++.....+. .+++|+.|+
T Consensus 323 ~~-~~~~~-----------------------l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~ 378 (594)
T 2p1m_B 323 DY-IEDAG-----------------------LEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVL 378 (594)
T ss_dssp GG-GHHHH-----------------------HHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEE
T ss_pred Cc-cCHHH-----------------------HHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHH
Confidence 43 22111 1111122344555544 22344333222222 255666666
Q ss_pred cccccccCcCCCccC-CCCcccEEEcC--C----cccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCC
Q 047790 412 LNSNFFDGIIPMEFG-DCISLNTLDLG--S----NNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGS 484 (885)
Q Consensus 412 Ls~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 484 (885)
++.|.+++..+..+. .+++|+.|+++ + |.+++. .+...++..+..+++|+.|+|++ .+++.
T Consensus 379 ~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~-----------~~~~~~~~l~~~~~~L~~L~L~~-~l~~~ 446 (594)
T 2p1m_B 379 YFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLE-----------PLDIGFGAIVEHCKDLRRLSLSG-LLTDK 446 (594)
T ss_dssp EEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCC-----------CTHHHHHHHHHHCTTCCEEECCS-SCCHH
T ss_pred HhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCC-----------chhhHHHHHHhhCCCccEEeecC-cccHH
Confidence 666666544433333 35666666666 2 233210 00011223355667777777765 55444
Q ss_pred CCCCccc-ccccceeeeccccceeccccccccccCCccCCCCCccc-cccccCcEEEccCCCCCCceeeeeccccccccc
Q 047790 485 IPPEFGD-SLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSF-GNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEI 562 (885)
Q Consensus 485 ~p~~~~~-l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~i 562 (885)
.+..+.. +++|+.|+|++|.+++.. +..+ ..+++|+.|+|++|+++ +..
T Consensus 447 ~~~~l~~~~~~L~~L~L~~~~i~~~~----------------~~~l~~~~~~L~~L~L~~n~~~-------------~~~ 497 (594)
T 2p1m_B 447 VFEYIGTYAKKMEMLSVAFAGDSDLG----------------MHHVLSGCDSLRKLEIRDCPFG-------------DKA 497 (594)
T ss_dssp HHHHHHHHCTTCCEEEEESCCSSHHH----------------HHHHHHHCTTCCEEEEESCSCC-------------HHH
T ss_pred HHHHHHHhchhccEeeccCCCCcHHH----------------HHHHHhcCCCcCEEECcCCCCc-------------HHH
Confidence 3334443 566777777777765432 2222 45677777777755542 222
Q ss_pred ch-hccCcccccccccccccCCCCCCccc-cCccccceeecccCc
Q 047790 563 PP-ELGNLVQLEYLDFSMNMLDGHIPEKL-CSLPYLLYLNLADNR 605 (885)
Q Consensus 563 p~-~~~~l~~L~~L~Ls~N~l~~~ip~~l-~~l~~L~~L~l~~N~ 605 (885)
+. .+..+++|++|++++|+++..-...+ ..+|.|+...+..+.
T Consensus 498 ~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~ 542 (594)
T 2p1m_B 498 LLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERG 542 (594)
T ss_dssp HHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSS
T ss_pred HHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCC
Confidence 22 33456777777777777643222222 345666555555443
No 322
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=5.1e-27 Score=268.69 Aligned_cols=218 Identities=22% Similarity=0.192 Sum_probs=161.6
Q ss_pred CCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEE
Q 047790 260 NCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFD 339 (885)
Q Consensus 260 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~ 339 (885)
.+++|++|+|++|.+++..|..|..+++|++|+|++|.+++.++ |..+++|++|+|++|.|++..+. ..|++|+
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~----~~L~~L~ 105 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG----PSIETLH 105 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC----TTCCEEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC----CCcCEEE
Confidence 44589999999999998888899999999999999999998776 88899999999999998864432 4688888
Q ss_pred eecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCccccc-ccccccceeccccccc
Q 047790 340 LQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIG-NLTNIQILKLNSNFFD 418 (885)
Q Consensus 340 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~ 418 (885)
+++|.+++..+.. +++|+.|++++|.+++..|..|..+++|+.|+|++|.+++..|..+. .+++|+.|+|++|.|+
T Consensus 106 L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 106 AANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp CCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred CcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 8888888766543 35677777777777777777777777777777777777776666665 5677777777777777
Q ss_pred CcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCccccccccee
Q 047790 419 GIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGL 498 (885)
Q Consensus 419 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 498 (885)
+..+ +..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|.+++ +|..+..+++|+.|
T Consensus 183 ~~~~--~~~l~~L~~L~Ls~N~l~-----------------~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L 242 (487)
T 3oja_A 183 DVKG--QVVFAKLKTLDLSSNKLA-----------------FMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHF 242 (487)
T ss_dssp EEEC--CCCCTTCCEEECCSSCCC-----------------EECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEE
T ss_pred cccc--cccCCCCCEEECCCCCCC-----------------CCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEE
Confidence 5522 234667777777777664 234446667777777777777774 56666667777777
Q ss_pred eeccccce
Q 047790 499 YLGHNQLT 506 (885)
Q Consensus 499 ~Ls~N~l~ 506 (885)
++++|.++
T Consensus 243 ~l~~N~l~ 250 (487)
T 3oja_A 243 DLRGNGFH 250 (487)
T ss_dssp ECTTCCBC
T ss_pred EcCCCCCc
Confidence 77777666
No 323
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.8e-25 Score=236.86 Aligned_cols=217 Identities=25% Similarity=0.277 Sum_probs=171.1
Q ss_pred ccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCC
Q 047790 80 VSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDI 159 (885)
Q Consensus 80 ~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 159 (885)
+|..+. ++|++|+|++|.+++..+..|+++++|++|+|++|++++..+..|..+++|++|+|++|.+++..|..|.++
T Consensus 22 ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 99 (276)
T 2z62_A 22 IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGL 99 (276)
T ss_dssp CCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTC
T ss_pred cCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCC
Confidence 455443 578999999999988777789999999999999999997777789999999999999999998878889999
Q ss_pred ccCceEEccCCcCCccCCcccCCCCCCccccccccccCC-CCCcccccccccccEEEeecccCcccCCccccCCCcccce
Q 047790 160 KQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSG-SLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDL 238 (885)
Q Consensus 160 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 238 (885)
++|++|++++|++++..+..+.++++|++|++++|++++ .+|.. +..+++|++|++++|++++..+..+..+++|+.
T Consensus 100 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~- 177 (276)
T 2z62_A 100 SSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY-FSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPL- 177 (276)
T ss_dssp TTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGG-GGGCTTCCEEECCSSCCCEECGGGGHHHHTCTT-
T ss_pred ccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchh-hccCCCCCEEECCCCCCCcCCHHHhhhhhhccc-
Confidence 999999999999997777788999999999999999974 24554 888899999999999888655555544443332
Q ss_pred ecccccccccccccccCccccCCCCCc-EEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeec
Q 047790 239 YLGIGPYQLSLFVGRITPEIGNCSMLK-YISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVL 317 (885)
Q Consensus 239 ~l~~n~~~~~~~~~~~~~~l~~l~~L~-~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 317 (885)
|. .|++++|++++..+..+. ..+|++|+|++|++++.++..|..+++|+.|++
T Consensus 178 -------------------------l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 231 (276)
T 2z62_A 178 -------------------------LNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWL 231 (276)
T ss_dssp -------------------------CCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEEC
T ss_pred -------------------------cceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEc
Confidence 22 677888888755444443 347888888888888777777777788888888
Q ss_pred cccccCCCC
Q 047790 318 VNNRISGSI 326 (885)
Q Consensus 318 s~N~l~~~~ 326 (885)
++|.+.+..
T Consensus 232 ~~N~~~c~c 240 (276)
T 2z62_A 232 HTNPWDCSC 240 (276)
T ss_dssp CSSCBCCCT
T ss_pred cCCcccccC
Confidence 887776543
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=3.2e-25 Score=234.82 Aligned_cols=211 Identities=23% Similarity=0.222 Sum_probs=133.7
Q ss_pred ccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcC
Q 047790 358 NLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLG 437 (885)
Q Consensus 358 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 437 (885)
++++|++++|.+.+..+..|.++++|++|++++|++++..+..|..+++|++|+|++|.+++..+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 34444444444444444455555666666666666665555566666666666666666666655666666666666666
Q ss_pred CcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCC-CCCCcccccccceeeeccccceeccccccccc
Q 047790 438 SNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGS-IPPEFGDSLKVQGLYLGHNQLTGSIPESLGYL 516 (885)
Q Consensus 438 ~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 516 (885)
+|+++ +..+..+..+++|++|++++|++++. +|..+..+++|+.|++++|++++..
T Consensus 109 ~n~l~----------------~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~------- 165 (276)
T 2z62_A 109 ETNLA----------------SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY------- 165 (276)
T ss_dssp TSCCC----------------CSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEEC-------
T ss_pred CCCcc----------------ccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCC-------
Confidence 66654 12233456666667777777766643 4666777777777777777776533
Q ss_pred cCCccCCCCCccccccccCc----EEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccC
Q 047790 517 SGNKLYGSVPTSFGNLNGLT----HLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCS 592 (885)
Q Consensus 517 s~n~l~~~~p~~~~~l~~L~----~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~ 592 (885)
+..|..+++|+ .|++++|+++ .+|.......+|++|+|++|++++..+..+..
T Consensus 166 ---------~~~~~~l~~L~~l~l~L~ls~n~l~--------------~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~ 222 (276)
T 2z62_A 166 ---------CTDLRVLHQMPLLNLSLDLSLNPMN--------------FIQPGAFKEIRLKELALDTNQLKSVPDGIFDR 222 (276)
T ss_dssp ---------GGGGHHHHTCTTCCEEEECCSSCCC--------------EECTTSSCSCCEEEEECCSSCCSCCCTTTTTT
T ss_pred ---------HHHhhhhhhccccceeeecCCCccc--------------ccCccccCCCcccEEECCCCceeecCHhHhcc
Confidence 34555555555 6777755554 33444444557888888888888655555678
Q ss_pred ccccceeecccCcCCCCCCCCc
Q 047790 593 LPYLLYLNLADNRLEGEVPRSG 614 (885)
Q Consensus 593 l~~L~~L~l~~N~l~~~~p~~~ 614 (885)
+++|++|++++|++++..|...
T Consensus 223 l~~L~~L~l~~N~~~c~c~~l~ 244 (276)
T 2z62_A 223 LTSLQKIWLHTNPWDCSCPRID 244 (276)
T ss_dssp CCSCCEEECCSSCBCCCTTTTH
T ss_pred cccccEEEccCCcccccCCchH
Confidence 8888888888888888766543
No 325
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=6e-25 Score=233.79 Aligned_cols=212 Identities=26% Similarity=0.243 Sum_probs=130.3
Q ss_pred ccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCc
Q 047790 377 ISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNM 456 (885)
Q Consensus 377 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~ 456 (885)
+.++++++++++++|.++. +|..+. ++++.|+|++|.+++..|..|..+++|++|+|++|+|++
T Consensus 6 ~~~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~------------- 69 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK------------- 69 (290)
T ss_dssp EECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-------------
T ss_pred ccccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-------------
Confidence 3445556666666666653 333332 456666666666666656666666666666666666642
Q ss_pred ccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCc
Q 047790 457 LSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLT 536 (885)
Q Consensus 457 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~ 536 (885)
++.. ..+++|++|++++|+++ .+|..+..+++|+.|++++|++++.. |..|..+++|+
T Consensus 70 ----~~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~----------------~~~~~~l~~L~ 127 (290)
T 1p9a_G 70 ----LQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLP----------------LGALRGLGELQ 127 (290)
T ss_dssp ----EECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCC----------------SSTTTTCTTCC
T ss_pred ----ccCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccC----------------HHHHcCCCCCC
Confidence 1211 45566666666666666 56666666666777777766666322 45566677777
Q ss_pred EEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCCccc
Q 047790 537 HLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGIC 616 (885)
Q Consensus 537 ~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~~~~ 616 (885)
.|+|++|+++ +..|..+..+++|++|+|++|+|++..+..+..+++|++|++++|+|+..++.....
T Consensus 128 ~L~L~~N~l~-------------~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~ 194 (290)
T 1p9a_G 128 ELYLKGNELK-------------TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGS 194 (290)
T ss_dssp EEECTTSCCC-------------CCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred EEECCCCCCC-------------ccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhccc
Confidence 7777755444 222344566777777777777777433334566777777777777777555544555
Q ss_pred cccccccccCCccccccccCCcccccccc
Q 047790 617 QNLSIISLTGNKDLCEKIMGSDCQILTFG 645 (885)
Q Consensus 617 ~~~~~~~~~~N~~~c~~~~~~~c~~~~~~ 645 (885)
..++.+++.+|||.| +|.+.++.
T Consensus 195 ~~L~~l~L~~Np~~C------~c~~~~l~ 217 (290)
T 1p9a_G 195 HLLPFAFLHGNPWLC------NCEILYFR 217 (290)
T ss_dssp CCCSEEECCSCCBCC------SGGGHHHH
T ss_pred ccCCeEEeCCCCccC------cCccHHHH
Confidence 567777788888888 77765543
No 326
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.92 E-value=2.1e-26 Score=267.00 Aligned_cols=185 Identities=17% Similarity=0.060 Sum_probs=129.2
Q ss_pred eecccCCceEEEEEe-CCCCeEEEEEeccccc----------ccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEE
Q 047790 668 VIGGGGFRTAFKGTM-PDQKTVAVKKLSQATG----------QCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 668 ~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~----------~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv 735 (885)
..+.|+.|.+..++. -.|+.+++|++.+... ...+++.+|+++|+++ .|+||++++++++++...|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 456677776666543 3488899999865321 1235689999999999 599999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||++|++|.+++...+ .++.. +|+.||+.||+|+| ++||+||||||+|||++.++.+||+|||+|+......
T Consensus 321 MEyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp EECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred EecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 99999999999998644 46653 57899999999999 9999999999999999999999999999998765422
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQP 861 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P 861 (885)
.......||+.|+|||++.+. +..++|+|++|++++++.++..|
T Consensus 394 -~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 394 -SWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred -ccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccch
Confidence 223345699999999998764 56779999999998877665444
No 327
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=5.1e-28 Score=286.20 Aligned_cols=62 Identities=8% Similarity=-0.041 Sum_probs=33.8
Q ss_pred cccCcEEEccCCCCCCceeeeecccccccccchhc-cCcccccccccccccCCCCCCc-cccCccccceeecccCcC
Q 047790 532 LNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPEL-GNLVQLEYLDFSMNMLDGHIPE-KLCSLPYLLYLNLADNRL 606 (885)
Q Consensus 532 l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~-~~l~~L~~L~Ls~N~l~~~ip~-~l~~l~~L~~L~l~~N~l 606 (885)
+++|+.|+|++|.+ ++..+..+ ..+++|++|+|++|++++..+. .+..+++|++|++++|++
T Consensus 455 ~~~L~~L~L~~~~i-------------~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 455 AKKMEMLSVAFAGD-------------SDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp CTTCCEEEEESCCS-------------SHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred chhccEeeccCCCC-------------cHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 55566666664433 22333333 4466677777777766433332 233466666777766665
No 328
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.9e-24 Score=228.10 Aligned_cols=226 Identities=23% Similarity=0.299 Sum_probs=130.0
Q ss_pred CCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEcc
Q 047790 89 SLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFS 168 (885)
Q Consensus 89 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 168 (885)
++..++++.+.+... .....+++|+.|++++|.++. + ..++.+++|++|+|++|.+++. ..++.+++|++|+|+
T Consensus 20 ~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 20 ETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECT
T ss_pred HHHHHHhcCcccccc--cccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECC
Confidence 344455555554432 234556666666666666652 2 2356666666666666666642 356666666666666
Q ss_pred CCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceeccccccccc
Q 047790 169 GNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLS 248 (885)
Q Consensus 169 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~ 248 (885)
+|++++..+..|.++++|++|+|++|+++ .+|...+..+++|++|++++|++++..+..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-------------------- 152 (272)
T 3rfs_A 94 GNQLQSLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLTYLNLAHNQLQSLPKGV-------------------- 152 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTT--------------------
T ss_pred CCccCccChhHhcCCcCCCEEECCCCcCC-ccCHHHhccCCCCCEEECCCCccCccCHHH--------------------
Confidence 66666555555666666666666666666 455454666666666666666665333222
Q ss_pred ccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCc
Q 047790 249 LFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPE 328 (885)
Q Consensus 249 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 328 (885)
+..+++|++|++++|++++..+..+..+++|++|++++|++++.++..+..+++|++|++++|.+.+..|
T Consensus 153 ---------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~- 222 (272)
T 3rfs_A 153 ---------FDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP- 222 (272)
T ss_dssp ---------TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT-
T ss_pred ---------hccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc-
Confidence 2334455555555565555555555556666666666666666555556666666666666665554333
Q ss_pred ccCCCCceeEEeecCccccccCccccCc
Q 047790 329 YISELPLKVFDLQYNNFTGVIPVSLWNS 356 (885)
Q Consensus 329 ~~~~~~L~~L~Ls~N~l~~~~p~~~~~l 356 (885)
.++.++++.|+++|.+|..++.+
T Consensus 223 -----~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 223 -----GIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp -----TTHHHHHHHHHTGGGBBCTTSCB
T ss_pred -----HHHHHHHHHHhCCCcccCccccc
Confidence 34555555555555555555443
No 329
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=3.5e-23 Score=218.20 Aligned_cols=203 Identities=25% Similarity=0.287 Sum_probs=143.2
Q ss_pred CCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEcc
Q 047790 89 SLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFS 168 (885)
Q Consensus 89 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 168 (885)
..+.++++++.++ .+|..+. ++|++|+|++|++++..+..|+.+++|++|+|++|.++...+..|..+++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 4567888888876 3565554 567888888888876666677778888888888888875555566777788888888
Q ss_pred CCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceeccccccccc
Q 047790 169 GNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLS 248 (885)
Q Consensus 169 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~ 248 (885)
+|++++..+..|.++++|++|+|++|+++ .++...|..+++|++|++++|++++..+..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~-------------------- 152 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQSLPKGV-------------------- 152 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTT--------------------
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccC-eeCHHHhCcCcCCCEEECCCCcCCccCHhH--------------------
Confidence 88877666666777777777777777777 555555777777777777777766322222
Q ss_pred ccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCC
Q 047790 249 LFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISG 324 (885)
Q Consensus 249 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 324 (885)
+..+++|++|++++|++++..+..|..+++|++|+|++|++++.++..|..+++|+.|+|++|.+..
T Consensus 153 ---------~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 153 ---------FDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp ---------TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred ---------ccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 3445667777777777776666667777777777777777777666667777777777777776653
No 330
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=4.6e-26 Score=251.22 Aligned_cols=259 Identities=18% Similarity=0.183 Sum_probs=171.7
Q ss_pred EEecCCcccccccccccCCCCCcEEEccCCCCcCccc----ccccccC-CcceeeccccccCCCCCcccCC------CCc
Q 047790 267 ISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIE----DVFDRCT-NLSELVLVNNRISGSIPEYISE------LPL 335 (885)
Q Consensus 267 L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~------~~L 335 (885)
++++.|.+++.+|..+....+|++|+|++|.+++..+ +.|..++ +|++|+|++|++++..+..+.. ..|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4566666766666666666667777777777766655 5566666 6777777777776655554433 357
Q ss_pred eeEEeecCccccccCccccCc-----cccceeecccccccCCCcccccc-----cccccEEEccCCcccccCcc----cc
Q 047790 336 KVFDLQYNNFTGVIPVSLWNS-----ENLMEFNAASNLLEGSLSWEISN-----AVALEKLDLSSNMLTRQIPK----KI 401 (885)
Q Consensus 336 ~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~~~~~~~-----l~~L~~L~Ls~N~l~~~~p~----~~ 401 (885)
++|+|++|++++..+..+... ++|++|++++|.+++..+..+.. .++|++|+|++|++++..+. .+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 777777777776665544333 67777888877777666555443 25788888888888754433 34
Q ss_pred cccc-cccceecccccccCcCCCccC----CC-CcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccC-CCCCEE
Q 047790 402 GNLT-NIQILKLNSNFFDGIIPMEFG----DC-ISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRL-TNLTTL 474 (885)
Q Consensus 402 ~~l~-~L~~L~Ls~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l-~~L~~L 474 (885)
..++ +|++|+|++|++++..+..+. .+ ++|++|+|++|+|++... ..++..+..+ ++|+.|
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~------------~~l~~~l~~~~~~L~~L 230 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSY------------AELAYIFSSIPNHVVSL 230 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCH------------HHHHHHHHHSCTTCCEE
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHH------------HHHHHHHhcCCCCceEE
Confidence 4444 888888888888876664443 34 588888888888752110 1256666664 589999
Q ss_pred eccCccccCCCC----CCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCC
Q 047790 475 NLFGNLLTGSIP----PEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELD 546 (885)
Q Consensus 475 ~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 546 (885)
+|++|++++..+ ..+..+++|+.|++++|++++..+..+. .++..+..+++|+.|||++|++.
T Consensus 231 ~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~---------~l~~~~~~l~~L~~LdL~~N~l~ 297 (362)
T 3goz_A 231 NLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCK---------ALGAAFPNIQKIILVDKNGKEIH 297 (362)
T ss_dssp ECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHH---------HHHTTSTTCCEEEEECTTSCBCC
T ss_pred ECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHH---------HHHHHhccCCceEEEecCCCcCC
Confidence 999998886443 3356678888899998886543332222 22556778888888888877765
No 331
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=7.7e-24 Score=220.69 Aligned_cols=189 Identities=25% Similarity=0.266 Sum_probs=152.4
Q ss_pred CCCcccCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCc
Q 047790 51 TRHCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPS 130 (885)
Q Consensus 51 ~~~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~ 130 (885)
.+||.|.|++|... ...+++++++++ .+|..+. +++++|+|++|.+++..+..|+++++|++|+|++|++++..|.
T Consensus 2 ~~Cp~~~gC~C~~~-~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 77 (251)
T 3m19_A 2 KTCETVTGCTCNEG-KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAG 77 (251)
T ss_dssp --CHHHHSSEEEGG-GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTT
T ss_pred ccCCCCCceEcCCC-CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHh
Confidence 36899999999532 345677888777 5666554 6889999999999888888899999999999999999988888
Q ss_pred cccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCccccccccc
Q 047790 131 QLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQS 210 (885)
Q Consensus 131 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~ 210 (885)
.|..+++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+++ .+|...|..+++
T Consensus 78 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~ 156 (251)
T 3m19_A 78 VFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTN 156 (251)
T ss_dssp TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTT
T ss_pred HhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCC-ccCHHHcCcCcC
Confidence 8899999999999999999777788889999999999999999777777888999999999999998 677766888999
Q ss_pred ccEEEeecccCcccCCccccCCCcccceeccccc
Q 047790 211 LSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGP 244 (885)
Q Consensus 211 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~ 244 (885)
|++|+|++|++++..+..+..+++|+.|++++|+
T Consensus 157 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 190 (251)
T 3m19_A 157 LQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQ 190 (251)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCC
T ss_pred CCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCc
Confidence 9999999999886555555555544444444433
No 332
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=1.3e-23 Score=223.43 Aligned_cols=205 Identities=25% Similarity=0.228 Sum_probs=168.1
Q ss_pred ccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCccc
Q 047790 353 LWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLN 432 (885)
Q Consensus 353 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 432 (885)
+.++++++++++++|.++... ..+. +.++.|+|++|++++..|..|..+++|+.|+|++|.|+++.+. ..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~~ip-~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTALP-PDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCSSCC-SCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCCcCC-CCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 455667777777777776443 3332 5788999999999888888899999999999999999865443 7888999
Q ss_pred EEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccc
Q 047790 433 TLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPES 512 (885)
Q Consensus 433 ~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 512 (885)
+|++++|+++ .+|..+..+++|++|++++|++++..|..|..+++|+.|+|++|++++..
T Consensus 81 ~L~Ls~N~l~-----------------~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~--- 140 (290)
T 1p9a_G 81 TLDLSHNQLQ-----------------SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLP--- 140 (290)
T ss_dssp EEECCSSCCS-----------------SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCC---
T ss_pred EEECCCCcCC-----------------cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccC---
Confidence 9999999886 67778888999999999999999777788999999999999999988433
Q ss_pred cccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccch-hccCcccccccccccccCCCCCCcccc
Q 047790 513 LGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPP-ELGNLVQLEYLDFSMNMLDGHIPEKLC 591 (885)
Q Consensus 513 ~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~-~~~~l~~L~~L~Ls~N~l~~~ip~~l~ 591 (885)
+..|..+++|+.|+|++|+++ .+|. .+..+++|++|+|++|+|+ .+|..+.
T Consensus 141 -------------~~~~~~l~~L~~L~L~~N~l~--------------~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~ 192 (290)
T 1p9a_G 141 -------------PGLLTPTPKLEKLSLANNNLT--------------ELPAGLLNGLENLDTLLLQENSLY-TIPKGFF 192 (290)
T ss_dssp -------------TTTTTTCTTCCEEECTTSCCS--------------CCCTTTTTTCTTCCEEECCSSCCC-CCCTTTT
T ss_pred -------------hhhcccccCCCEEECCCCcCC--------------ccCHHHhcCcCCCCEEECCCCcCC-ccChhhc
Confidence 567888999999999977665 3444 4578999999999999998 7899999
Q ss_pred CccccceeecccCcCCCCC
Q 047790 592 SLPYLLYLNLADNRLEGEV 610 (885)
Q Consensus 592 ~l~~L~~L~l~~N~l~~~~ 610 (885)
.+++|+.+++++|++.+..
T Consensus 193 ~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 193 GSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp TTCCCSEEECCSCCBCCSG
T ss_pred ccccCCeEEeCCCCccCcC
Confidence 9999999999999987643
No 333
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=1.4e-23 Score=217.16 Aligned_cols=203 Identities=22% Similarity=0.243 Sum_probs=144.8
Q ss_pred cccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCc-CCCCCCccccccccccEeeeec-cCCCCCCCccc
Q 047790 79 PVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQ-LSGSIPSQLGLLTRLETISLRS-NSFTGEMPSEL 156 (885)
Q Consensus 79 ~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~l 156 (885)
.+|. +. ++|++|+|++|.+++..+..|+++++|++|+|++|+ +++..+..|..+++|++|++++ |++++..+..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 4555 32 378888888888887777788888888888888886 7755556788888888888887 88886666778
Q ss_pred cCCccCceEEccCCcCCccCCcccCCCCCCc---ccccccc-ccCCCCCccccccccccc-EEEeecccCcccCCccccC
Q 047790 157 GDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQ---DLDLSDN-LLSGSLPVSLLKNLQSLS-YLDVSNNLLSGNIPPEIGN 231 (885)
Q Consensus 157 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~ 231 (885)
..+++|++|++++|++++ +|. |..+++|+ +|++++| +++ .+|...|.++++|+ +|++++|+++ .+|...
T Consensus 102 ~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~-~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~-- 175 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMT-SIPVNAFQGLCNETLTLKLYNNGFT-SVQGYA-- 175 (239)
T ss_dssp ECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCC-EECTTTTTTTBSSEEEEECCSCCCC-EECTTT--
T ss_pred CCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchh-hcCcccccchhcceeEEEcCCCCCc-ccCHhh--
Confidence 888888888888888875 565 77777777 8888888 776 66666677777777 7777777776 333211
Q ss_pred CCcccceecccccccccccccccCccccCCCCCcEEEecCCc-ccccccccccCC-CCCcEEEccCCCCcCccccccccc
Q 047790 232 LKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNK-LSGPIPRELCNS-GSLVEINLDGNMLSGTIEDVFDRC 309 (885)
Q Consensus 232 l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~-l~~~~p~~l~~l-~~L~~L~L~~N~l~~~~~~~~~~l 309 (885)
...++|+.|++++|+ +++..+..|..+ ++|++|++++|++++.++. .+
T Consensus 176 ---------------------------~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~ 225 (239)
T 2xwt_C 176 ---------------------------FNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GL 225 (239)
T ss_dssp ---------------------------TTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TC
T ss_pred ---------------------------cCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---Hh
Confidence 112457777777774 775555666666 7777777777777765554 34
Q ss_pred CCcceeecccc
Q 047790 310 TNLSELVLVNN 320 (885)
Q Consensus 310 ~~L~~L~Ls~N 320 (885)
++|+.|+++++
T Consensus 226 ~~L~~L~l~~~ 236 (239)
T 2xwt_C 226 EHLKELIARNT 236 (239)
T ss_dssp TTCSEEECTTC
T ss_pred ccCceeeccCc
Confidence 56666666654
No 334
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=7.9e-26 Score=247.05 Aligned_cols=268 Identities=15% Similarity=0.220 Sum_probs=159.8
Q ss_pred CCCCcccCCccccCCcEEEEEEecccccccccccccCC--CCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCC
Q 047790 50 TTRHCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNL--SSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGS 127 (885)
Q Consensus 50 ~~~~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 127 (885)
..-|..|.++.|+...++.++++++.+. +..+..+ +.++.|++++|.+.+..+. +..+++|++|+|++|.+++.
T Consensus 33 ~~vc~~W~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~ 108 (336)
T 2ast_B 33 SGVCKRWYRLASDESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVS 108 (336)
T ss_dssp TSSCHHHHHHHTCSTTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHH
T ss_pred HHHHHHHHHHhcCchhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHH
Confidence 3456789999887655666777666555 2334444 6667777777766655443 44566666666666666544
Q ss_pred -CCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCC-cCCcc-CCcccCCCCCCcccccccc-ccCCC-CCc
Q 047790 128 -IPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGN-GLNGT-IPSRLGDLTQLQDLDLSDN-LLSGS-LPV 202 (885)
Q Consensus 128 -~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~ 202 (885)
+|..+..+++|++|+|++|.+++..|..++.+++|++|+|++| .+++. ++..+.++++|++|++++| .+++. ++
T Consensus 109 ~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~- 187 (336)
T 2ast_B 109 TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQ- 187 (336)
T ss_dssp HHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHH-
T ss_pred HHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHH-
Confidence 5555666666666666666666555566666666666666666 45532 4444555666666666666 55422 22
Q ss_pred ccccccc-cccEEEeeccc--CcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCc-ccccc
Q 047790 203 SLLKNLQ-SLSYLDVSNNL--LSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNK-LSGPI 278 (885)
Q Consensus 203 ~~~~~l~-~L~~L~Ls~N~--l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~-l~~~~ 278 (885)
..+..++ +|++|++++|. ++ .+.+|..+..+++|++|++++|. +++..
T Consensus 188 ~~~~~l~~~L~~L~l~~~~~~~~----------------------------~~~l~~~~~~~~~L~~L~l~~~~~l~~~~ 239 (336)
T 2ast_B 188 VAVAHVSETITQLNLSGYRKNLQ----------------------------KSDLSTLVRRCPNLVHLDLSDSVMLKNDC 239 (336)
T ss_dssp HHHHHSCTTCCEEECCSCGGGSC----------------------------HHHHHHHHHHCTTCSEEECTTCTTCCGGG
T ss_pred HHHHhcccCCCEEEeCCCcccCC----------------------------HHHHHHHHhhCCCCCEEeCCCCCcCCHHH
Confidence 2245555 66666666552 22 12344455667777777777777 66666
Q ss_pred cccccCCCCCcEEEccCCC-CcCcccccccccCCcceeeccccccCCCCCcccCCC--CceeEEeecCccccccCcccc
Q 047790 279 PRELCNSGSLVEINLDGNM-LSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL--PLKVFDLQYNNFTGVIPVSLW 354 (885)
Q Consensus 279 p~~l~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~--~L~~L~Ls~N~l~~~~p~~~~ 354 (885)
+..+..+++|++|++++|. +.......+..+++|++|++++| ++. ..+..+ .+..|++++|++++..|..+.
T Consensus 240 ~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 240 FQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp GGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred HHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCccccCCccc
Confidence 7777777777778877774 33222235667777777777777 321 122222 245555666666665555443
No 335
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=2.3e-24 Score=232.28 Aligned_cols=205 Identities=20% Similarity=0.199 Sum_probs=126.1
Q ss_pred cccceeecccccccCCCcccc--cccccccEEEccCCcccccCc----ccccccccccceecccccccCcCCCccCCCCc
Q 047790 357 ENLMEFNAASNLLEGSLSWEI--SNAVALEKLDLSSNMLTRQIP----KKIGNLTNIQILKLNSNFFDGIIPMEFGDCIS 430 (885)
Q Consensus 357 ~~L~~L~l~~N~l~~~~~~~~--~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 430 (885)
++|++|++++|.+.+..|..+ ..+++|++|+|++|++++..+ ..+..+++|++|+|++|++++..|..|..+++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 445666666666665555555 566666666666666665433 33445667777777777777666667777777
Q ss_pred ccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCC----Ccccccccceeeeccccce
Q 047790 431 LNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPP----EFGDSLKVQGLYLGHNQLT 506 (885)
Q Consensus 431 L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~ 506 (885)
|++|+|++|++.+.... ..+..+..+++|++|+|++|+++ .+|. .+..+++|+.|+|++|+++
T Consensus 171 L~~L~Ls~N~l~~~~~~------------~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~ 237 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGL------------MAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLR 237 (310)
T ss_dssp CCEEECCSCTTCHHHHH------------HTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCC
T ss_pred CCEEECCCCCCccchhh------------hHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCC
Confidence 77777777765421000 01122356667777777777775 2232 1355567777777777776
Q ss_pred eccccccccccCCccCCCCCcccccc---ccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCC
Q 047790 507 GSIPESLGYLSGNKLYGSVPTSFGNL---NGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLD 583 (885)
Q Consensus 507 g~~p~~~~~ls~n~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~ 583 (885)
+.+ |..+..+ ++|+.|+|++|+++ .+|..+. ++|++|||++|+|+
T Consensus 238 ~~~----------------p~~~~~~~~~~~L~~L~Ls~N~l~--------------~lp~~~~--~~L~~L~Ls~N~l~ 285 (310)
T 4glp_A 238 ATV----------------NPSAPRCMWSSALNSLNLSFAGLE--------------QVPKGLP--AKLRVLDLSSNRLN 285 (310)
T ss_dssp CCC----------------CSCCSSCCCCTTCCCEECCSSCCC--------------SCCSCCC--SCCSCEECCSCCCC
T ss_pred ccc----------------hhhHHhccCcCcCCEEECCCCCCC--------------chhhhhc--CCCCEEECCCCcCC
Confidence 544 3334443 57777777755554 4555553 67788888888887
Q ss_pred CCCCccccCccccceeecccCcCCC
Q 047790 584 GHIPEKLCSLPYLLYLNLADNRLEG 608 (885)
Q Consensus 584 ~~ip~~l~~l~~L~~L~l~~N~l~~ 608 (885)
+ +|. +..+++|++|++++|+++.
T Consensus 286 ~-~~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 286 R-APQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp S-CCC-TTSCCCCSCEECSSTTTSC
T ss_pred C-Cch-hhhCCCccEEECcCCCCCC
Confidence 4 343 5667778888888887763
No 336
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=1.6e-23 Score=221.06 Aligned_cols=205 Identities=22% Similarity=0.234 Sum_probs=118.3
Q ss_pred CCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEE
Q 047790 260 NCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFD 339 (885)
Q Consensus 260 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~ 339 (885)
.+++|+.|++++|.++. + ..+..+++|++|++++|.+++. ..+..+++|++|++++|++++
T Consensus 39 ~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~--------------- 99 (272)
T 3rfs_A 39 ELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQS--------------- 99 (272)
T ss_dssp HHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCC---------------
T ss_pred cccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCc---------------
Confidence 34455556666655552 1 2345555555555555555543 234445555555555555444
Q ss_pred eecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccC
Q 047790 340 LQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDG 419 (885)
Q Consensus 340 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 419 (885)
..+..+..+++|++|++++|.+++..+..|..+++|++|++++|++++..+..+..+++|+.|++++|++++
T Consensus 100 --------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 171 (272)
T 3rfs_A 100 --------LPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS 171 (272)
T ss_dssp --------CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred --------cChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCc
Confidence 333444444555555555555555555555566666666666666666555556666666666666666666
Q ss_pred cCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceee
Q 047790 420 IIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLY 499 (885)
Q Consensus 420 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 499 (885)
..+..|..+++|++|++++|+++ +..|..+..+++|+.|++++|.+.+. +++|+.|+
T Consensus 172 ~~~~~~~~l~~L~~L~L~~N~l~----------------~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~ 228 (272)
T 3rfs_A 172 LPEGVFDKLTQLKDLRLYQNQLK----------------SVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLS 228 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCS----------------CCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHH
T ss_pred cCHHHhcCCccCCEEECCCCcCC----------------ccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHH
Confidence 66666666666666666666654 23444566666777777777766543 23466677
Q ss_pred eccccceeccccccc
Q 047790 500 LGHNQLTGSIPESLG 514 (885)
Q Consensus 500 Ls~N~l~g~~p~~~~ 514 (885)
++.|+++|.+|..++
T Consensus 229 ~~~n~~~g~ip~~~~ 243 (272)
T 3rfs_A 229 EWINKHSGVVRNSAG 243 (272)
T ss_dssp HHHHHTGGGBBCTTS
T ss_pred HHHHhCCCcccCccc
Confidence 777777776655544
No 337
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=2.7e-23 Score=223.91 Aligned_cols=227 Identities=21% Similarity=0.211 Sum_probs=140.6
Q ss_pred CCCCEEecCCCcccCcCCc---CccCcCCCCEEeccCCcCCCCCCccc--cccccccEeeeeccCCCCCCC----ccccC
Q 047790 88 SSLRILDLSKNLLFGQLSP---QVSNLKRLKMLSVGENQLSGSIPSQL--GLLTRLETISLRSNSFTGEMP----SELGD 158 (885)
Q Consensus 88 ~~L~~L~Ls~n~l~~~~~~---~~~~l~~L~~L~L~~n~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~l~~ 158 (885)
..++.|+++++.++...-. .+..+++|++|+|++|.+++..|..+ +.+++|++|+|++|.+++..| ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 3467777777766432111 12234668888888888888888777 778888888888888876555 34456
Q ss_pred CccCceEEccCCcCCccCCcccCCCCCCccccccccccCCC--CC-cccccccccccEEEeecccCcccCCccccCCCcc
Q 047790 159 IKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGS--LP-VSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKL 235 (885)
Q Consensus 159 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p-~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 235 (885)
+++|++|+|++|++.+..|..|+.+++|++|+|++|++.+. ++ ...+..+++|++|++++|+++. ++.
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~-------- 214 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTG-------- 214 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHH--------
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHH--------
Confidence 77888888888888877777888888888888888887532 22 2224677788888888887752 111
Q ss_pred cceecccccccccccccccCcc-ccCCCCCcEEEecCCcccccccccccCC---CCCcEEEccCCCCcCcccccccccCC
Q 047790 236 SDLYLGIGPYQLSLFVGRITPE-IGNCSMLKYISLSNNKLSGPIPRELCNS---GSLVEINLDGNMLSGTIEDVFDRCTN 311 (885)
Q Consensus 236 ~~L~l~~n~~~~~~~~~~~~~~-l~~l~~L~~L~Ls~N~l~~~~p~~l~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~ 311 (885)
++.. ++.+++|++|+|++|++++..|..+..+ ++|++|+|++|+|+.++. .+. ++
T Consensus 215 ------------------~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~lp~-~~~--~~ 273 (310)
T 4glp_A 215 ------------------VCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPK-GLP--AK 273 (310)
T ss_dssp ------------------HHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSCCS-CCC--SC
T ss_pred ------------------HHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCchhh-hhc--CC
Confidence 0111 2344555666666666665555555444 466666666666663332 221 55
Q ss_pred cceeeccccccCCCCCcccCCC-CceeEEeecCccc
Q 047790 312 LSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFT 346 (885)
Q Consensus 312 L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~ 346 (885)
|++|+|++|+|++. |. +..+ .|+.|++++|+++
T Consensus 274 L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 274 LRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred CCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 66666666666643 22 2222 4666666666655
No 338
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=1e-22 Score=218.74 Aligned_cols=192 Identities=25% Similarity=0.347 Sum_probs=102.0
Q ss_pred ccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEE
Q 047790 356 SENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLD 435 (885)
Q Consensus 356 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 435 (885)
+++|++|++++|.+... + .+..+++|++|+|++|++++..+ +..+++|++|+|++|++++. + .+..+++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~ 113 (308)
T 1h6u_A 40 LDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIKTLD 113 (308)
T ss_dssp HHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCCEEE
T ss_pred cCCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCCEEE
Confidence 34444444444444432 1 34455555555555555554333 55555566666666655542 2 455556666666
Q ss_pred cCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceecccccccc
Q 047790 436 LGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGY 515 (885)
Q Consensus 436 Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 515 (885)
+++|+++ .+|. +..+++|+.|++++|++++. +. +..+++|+.|++++|++++.
T Consensus 114 l~~n~l~-----------------~~~~-l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~------- 166 (308)
T 1h6u_A 114 LTSTQIT-----------------DVTP-LAGLSNLQVLYLDLNQITNI-SP-LAGLTNLQYLSIGNAQVSDL------- 166 (308)
T ss_dssp CTTSCCC-----------------CCGG-GTTCTTCCEEECCSSCCCCC-GG-GGGCTTCCEEECCSSCCCCC-------
T ss_pred CCCCCCC-----------------Cchh-hcCCCCCCEEECCCCccCcC-cc-ccCCCCccEEEccCCcCCCC-------
Confidence 6655553 1222 55556666666666666532 22 55556666666666655521
Q ss_pred ccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccc
Q 047790 516 LSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPY 595 (885)
Q Consensus 516 ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~ 595 (885)
+. +..+++|+.|+|++|+++. +|. +..+++|++|+|++|++++. | .+..+++
T Consensus 167 ----------~~-l~~l~~L~~L~l~~n~l~~--------------~~~-l~~l~~L~~L~L~~N~l~~~-~-~l~~l~~ 218 (308)
T 1h6u_A 167 ----------TP-LANLSKLTTLKADDNKISD--------------ISP-LASLPNLIEVHLKNNQISDV-S-PLANTSN 218 (308)
T ss_dssp ----------GG-GTTCTTCCEEECCSSCCCC--------------CGG-GGGCTTCCEEECTTSCCCBC-G-GGTTCTT
T ss_pred ----------hh-hcCCCCCCEEECCCCccCc--------------Chh-hcCCCCCCEEEccCCccCcc-c-cccCCCC
Confidence 22 5556666666666554442 222 55566666666666666532 2 2556666
Q ss_pred cceeecccCcCCC
Q 047790 596 LLYLNLADNRLEG 608 (885)
Q Consensus 596 L~~L~l~~N~l~~ 608 (885)
|++|++++|++++
T Consensus 219 L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 219 LFIVTLTNQTITN 231 (308)
T ss_dssp CCEEEEEEEEEEC
T ss_pred CCEEEccCCeeec
Confidence 6666666666654
No 339
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=1.2e-24 Score=239.83 Aligned_cols=267 Identities=19% Similarity=0.204 Sum_probs=159.8
Q ss_pred EEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCccccCcc-ccceeecccccc
Q 047790 291 INLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSE-NLMEFNAASNLL 369 (885)
Q Consensus 291 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~l~~N~l 369 (885)
++++.|.+++.+|+.+...++|++|+|++|++++..+..+. ..+..++ +|++|++++|.+
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~-------------------~~l~~~~~~L~~L~Ls~N~l 63 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELI-------------------QAFANTPASVTSLNLSGNSL 63 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHH-------------------HHHHTCCTTCCEEECCSSCG
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHH-------------------HHHHhCCCceeEEECcCCCC
Confidence 45666666666666555555566666666665544331000 3344444 555555555555
Q ss_pred cCCCccccccc-----ccccEEEccCCcccccCccccccc-----ccccceecccccccCcCCCcc----CC-CCcccEE
Q 047790 370 EGSLSWEISNA-----VALEKLDLSSNMLTRQIPKKIGNL-----TNIQILKLNSNFFDGIIPMEF----GD-CISLNTL 434 (885)
Q Consensus 370 ~~~~~~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~----~~-l~~L~~L 434 (885)
.+..+..+..+ ++|++|+|++|++++..+..+... ++|+.|+|++|++++..+..+ .. .++|++|
T Consensus 64 ~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L 143 (362)
T 3goz_A 64 GFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSL 143 (362)
T ss_dssp GGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEE
T ss_pred CHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEE
Confidence 55555555554 667777777777766665544443 677777777777766554433 23 2577777
Q ss_pred EcCCcccCcceeEEEEeecCCcccCCCchhcccCC-CCCEEeccCccccCCCCCCcccc-----cccceeeeccccceec
Q 047790 435 DLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLT-NLTTLNLFGNLLTGSIPPEFGDS-----LKVQGLYLGHNQLTGS 508 (885)
Q Consensus 435 ~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~g~ 508 (885)
+|++|++++... ..++..+..++ +|++|+|++|++++..+..+... .+|+.|+|++|++++.
T Consensus 144 ~Ls~N~l~~~~~------------~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~ 211 (362)
T 3goz_A 144 NLRGNDLGIKSS------------DELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLK 211 (362)
T ss_dssp ECTTSCGGGSCH------------HHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGS
T ss_pred EccCCcCCHHHH------------HHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChh
Confidence 777777652110 13344455554 78888888888876655444433 5788888888877742
Q ss_pred cccccccccCCccCCCCCcccccc-ccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCC--
Q 047790 509 IPESLGYLSGNKLYGSVPTSFGNL-NGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGH-- 585 (885)
Q Consensus 509 ~p~~~~~ls~n~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~-- 585 (885)
-.. .++..+..+ ++|+.|||++|+++.... ..++..+..+++|++|+|++|++++.
T Consensus 212 ~~~------------~l~~~l~~~~~~L~~L~Ls~N~l~~~~~---------~~l~~~~~~l~~L~~L~L~~n~l~~i~~ 270 (362)
T 3goz_A 212 SYA------------ELAYIFSSIPNHVVSLNLCLNCLHGPSL---------ENLKLLKDSLKHLQTVYLDYDIVKNMSK 270 (362)
T ss_dssp CHH------------HHHHHHHHSCTTCCEEECCSSCCCCCCH---------HHHHHTTTTTTTCSEEEEEHHHHTTCCH
T ss_pred HHH------------HHHHHHhcCCCCceEEECcCCCCCcHHH---------HHHHHHHhcCCCccEEEeccCCccccCH
Confidence 111 124455553 478888888776653210 02234456677888888888885532
Q ss_pred -----CCccccCccccceeecccCcCCCC
Q 047790 586 -----IPEKLCSLPYLLYLNLADNRLEGE 609 (885)
Q Consensus 586 -----ip~~l~~l~~L~~L~l~~N~l~~~ 609 (885)
++..+..+++|++||+++|++...
T Consensus 271 ~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 271 EQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 233566778888888888887654
No 340
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=9.5e-24 Score=230.51 Aligned_cols=199 Identities=17% Similarity=0.199 Sum_probs=112.6
Q ss_pred CcEEEccCCCCcCccccccccc--CCcceeeccccccCCCCCcccCCCCceeEEeecCccccc-cCccccCccccceeec
Q 047790 288 LVEINLDGNMLSGTIEDVFDRC--TNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGV-IPVSLWNSENLMEFNA 364 (885)
Q Consensus 288 L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~l 364 (885)
++.+++++|.+. +..+..+ ++++.|++++|.+.+..+..+....|++|++++|.+++. +|..+..+++|++|++
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L 125 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSL 125 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEEC
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeC
Confidence 344455544443 2334444 566666666666665555544333566666666666544 5555556666666666
Q ss_pred ccccccCCCcccccccccccEEEccCC-ccccc-Ccccccccccccceecccc-cccCc-CCCccCCCC-cccEEEcCCc
Q 047790 365 ASNLLEGSLSWEISNAVALEKLDLSSN-MLTRQ-IPKKIGNLTNIQILKLNSN-FFDGI-IPMEFGDCI-SLNTLDLGSN 439 (885)
Q Consensus 365 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~-~L~~L~Ls~N 439 (885)
++|.+.+..+..++.+++|++|+|++| .+++. ++..+..+++|++|++++| .+++. ++..+..++ +|++|++++|
T Consensus 126 ~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 126 EGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 205 (336)
T ss_dssp TTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSC
T ss_pred cCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCC
Confidence 666665555555666666666666666 45542 4445556666666666666 66543 345555566 6666666666
Q ss_pred c--cCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCcc-ccCCCCCCcccccccceeeecccc
Q 047790 440 N--LNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNL-LTGSIPPEFGDSLKVQGLYLGHNQ 504 (885)
Q Consensus 440 ~--l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~ 504 (885)
. ++ .+.+|..+..+++|+.|++++|. +++..+..+..+++|+.|++++|.
T Consensus 206 ~~~~~---------------~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 206 RKNLQ---------------KSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp GGGSC---------------HHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred cccCC---------------HHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 3 22 12345555566666666666666 554555555555666666666553
No 341
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=2e-22 Score=203.47 Aligned_cols=158 Identities=27% Similarity=0.321 Sum_probs=125.5
Q ss_pred CCCcccCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCc
Q 047790 51 TRHCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPS 130 (885)
Q Consensus 51 ~~~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~ 130 (885)
...|+|.+|.|+...++ .+|..+ .++|++|+|++|.+++..+..|+.+++|++|+|++|++++..+.
T Consensus 4 ~C~C~~~~v~c~~~~l~-----------~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (208)
T 2o6s_A 4 RCSCSGTTVECYSQGRT-----------SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNG 70 (208)
T ss_dssp TCEEETTEEECCSSCCS-----------SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred CCEECCCEEEecCCCcc-----------CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChh
Confidence 34589999999764332 234333 45789999999998877777788899999999999998876666
Q ss_pred cccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCccccccccc
Q 047790 131 QLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQS 210 (885)
Q Consensus 131 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~ 210 (885)
.|..+++|++|+|++|++++..+..|+.+++|++|+|++|++++..+..|.++++|++|++++|+++ .+|...+..+++
T Consensus 71 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~ 149 (208)
T 2o6s_A 71 VFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTS 149 (208)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTT
T ss_pred hcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccc-eeCHHHhccCCC
Confidence 7788889999999999888766667888888888888888888776777888888888888888887 566666788888
Q ss_pred ccEEEeecccCc
Q 047790 211 LSYLDVSNNLLS 222 (885)
Q Consensus 211 L~~L~Ls~N~l~ 222 (885)
|++|++++|.+.
T Consensus 150 L~~L~l~~N~~~ 161 (208)
T 2o6s_A 150 LQYIWLHDNPWD 161 (208)
T ss_dssp CCEEECCSCCBC
T ss_pred ccEEEecCCCee
Confidence 888888888765
No 342
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=3.5e-22 Score=208.14 Aligned_cols=182 Identities=26% Similarity=0.297 Sum_probs=121.6
Q ss_pred cccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCC
Q 047790 382 ALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKI 461 (885)
Q Consensus 382 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~ 461 (885)
..++++++++.++ .+|..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|+++ +..
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~----------------~~~ 75 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ----------------TLS 75 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCC----------------CCC
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCC----------------ccC
Confidence 4556666666665 3444443 46677777777777666666777777777777766664 344
Q ss_pred chhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEcc
Q 047790 462 PGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLS 541 (885)
Q Consensus 462 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls 541 (885)
|..+..+++|++|+|++|++++..+..|..+++|+.|+|++|++++.. +..|..+++|+.|+|+
T Consensus 76 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~----------------~~~~~~l~~L~~L~Ls 139 (251)
T 3m19_A 76 AGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLP----------------SGVFDRLTKLKELRLN 139 (251)
T ss_dssp TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC----------------TTTTTTCTTCCEEECC
T ss_pred HhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcC----------------hhHhccCCcccEEECc
Confidence 555667777777777777777665666677777777777777776322 4456677777777777
Q ss_pred CCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCC
Q 047790 542 CNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVP 611 (885)
Q Consensus 542 ~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p 611 (885)
+|+++ +..|..++.+++|++|+|++|++++..|..+..+++|++|++++|++++...
T Consensus 140 ~N~l~-------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 140 TNQLQ-------------SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp SSCCC-------------CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTST
T ss_pred CCcCC-------------ccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCcc
Confidence 55544 2233457777778888888888876666677777788888888888776533
No 343
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.88 E-value=9.6e-23 Score=234.78 Aligned_cols=215 Identities=24% Similarity=0.352 Sum_probs=154.7
Q ss_pred CCCCCCCCCCc-----ccCCc-cccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEE
Q 047790 44 LSGWNKTTRHC-----HWFGV-KCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKML 117 (885)
Q Consensus 44 ~~~w~~~~~~c-----~w~gv-~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 117 (885)
+.+|..+.++| .|.|+ .|...+++.|+++++++++ +|+.++ ++|++|+|++|.++ .+| +.+++|++|
T Consensus 33 l~~W~~~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L 105 (571)
T 3cvr_A 33 WDKWEKQALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYL 105 (571)
T ss_dssp HHHHHTTCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEE
T ss_pred HHHHhccCCccccccchhhhccccccCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEE
Confidence 34565566677 79999 7887788888888888886 777663 78888888888887 566 457888888
Q ss_pred eccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccC
Q 047790 118 SVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLS 197 (885)
Q Consensus 118 ~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 197 (885)
+|++|+|++ +|. +.. +|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|++|+|++|+++
T Consensus 106 ~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~ 173 (571)
T 3cvr_A 106 DACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLT 173 (571)
T ss_dssp ECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCS
T ss_pred EccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCC
Confidence 888888886 666 654 88888888888885 565 57788888888888885 555 5678888888888887
Q ss_pred CCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCccccc
Q 047790 198 GSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGP 277 (885)
Q Consensus 198 ~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 277 (885)
.+|. +. ++|++|+|++|+|+ .+|. +.. +| ....+.|+.|+|++|+|+ .
T Consensus 174 -~lp~--l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L----------------------~~~~~~L~~L~Ls~N~l~-~ 221 (571)
T 3cvr_A 174 -FLPE--LP--ESLEALDVSTNLLE-SLPA-VPV--RN----------------------HHSEETEIFFRCRENRIT-H 221 (571)
T ss_dssp -CCCC--CC--TTCCEEECCSSCCS-SCCC-CC--------------------------------CCEEEECCSSCCC-C
T ss_pred -Ccch--hh--CCCCEEECcCCCCC-chhh-HHH--hh----------------------hcccccceEEecCCCcce-e
Confidence 4776 43 78888888888887 4444 321 11 011234577888888887 4
Q ss_pred ccccccCCCCCcEEEccCCCCcCccccccccc
Q 047790 278 IPRELCNSGSLVEINLDGNMLSGTIEDVFDRC 309 (885)
Q Consensus 278 ~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 309 (885)
+|..+..+++|+.|+|++|.+++.+|..+..+
T Consensus 222 lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 222 IPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp CCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred cCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 67767667777777777777777766666554
No 344
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=1.4e-24 Score=241.75 Aligned_cols=244 Identities=20% Similarity=0.242 Sum_probs=147.6
Q ss_pred cccccccCCCCCCEEecCCCcccCcC----CcCccCcCCCCEEeccCC---cCCCCCCccc-------cccccccEeeee
Q 047790 79 PVSPFLFNLSSLRILDLSKNLLFGQL----SPQVSNLKRLKMLSVGEN---QLSGSIPSQL-------GLLTRLETISLR 144 (885)
Q Consensus 79 ~~~~~l~~l~~L~~L~Ls~n~l~~~~----~~~~~~l~~L~~L~L~~n---~l~~~~p~~~-------~~l~~L~~L~Ls 144 (885)
.++..+..+++|++|+|++|.+++.. +..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 35566778888999999999887663 345778899999999885 4445556555 678889999999
Q ss_pred ccCCCC----CCCccccCCccCceEEccCCcCCccCCcccC----CC---------CCCccccccccccC-CCCCc--cc
Q 047790 145 SNSFTG----EMPSELGDIKQLKSLDFSGNGLNGTIPSRLG----DL---------TQLQDLDLSDNLLS-GSLPV--SL 204 (885)
Q Consensus 145 ~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~----~l---------~~L~~L~Ls~N~l~-~~~p~--~~ 204 (885)
+|.+++ .+|..+..+++|++|+|++|.+++..+..+. .+ ++|++|+|++|+++ +.+|. ..
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 998886 3677788888899999999888644433333 33 78888888888886 33442 23
Q ss_pred ccccccccEEEeecccCcc-----cCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCccccc--
Q 047790 205 LKNLQSLSYLDVSNNLLSG-----NIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGP-- 277 (885)
Q Consensus 205 ~~~l~~L~~L~Ls~N~l~~-----~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~-- 277 (885)
+..+++|++|++++|+++. ..|..+..+++|+.|+++.|...... .+.+|..+..+++|++|+|++|++++.
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g-~~~l~~~l~~~~~L~~L~L~~n~i~~~~~ 261 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLG-SSALAIALKSWPNLRELGLNDCLLSARGA 261 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHH-HHHHHHHGGGCTTCCEEECTTCCCCHHHH
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHH-HHHHHHHHccCCCcCEEECCCCCCchhhH
Confidence 6677888888888888762 22224444445555544433321100 123344444444455555555554433
Q ss_pred --cccccc--CCCCCcEEEccCCCCcC----cccccc-cccCCcceeeccccccC
Q 047790 278 --IPRELC--NSGSLVEINLDGNMLSG----TIEDVF-DRCTNLSELVLVNNRIS 323 (885)
Q Consensus 278 --~p~~l~--~l~~L~~L~L~~N~l~~----~~~~~~-~~l~~L~~L~Ls~N~l~ 323 (885)
+|..+. .+++|++|+|++|.+++ .++..+ ..+++|++|++++|+++
T Consensus 262 ~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~ 316 (386)
T 2ca6_A 262 AAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 316 (386)
T ss_dssp HHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred HHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCC
Confidence 233331 24444444444444444 122222 33444444444444444
No 345
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=4e-22 Score=206.11 Aligned_cols=196 Identities=15% Similarity=0.166 Sum_probs=115.0
Q ss_pred CCcEEEecCCcccccccccccCCCCCcEEEccCCC-CcCcccccccccCCcceeeccc-cccCCCCCcccCCCCceeEEe
Q 047790 263 MLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNM-LSGTIEDVFDRCTNLSELVLVN-NRISGSIPEYISELPLKVFDL 340 (885)
Q Consensus 263 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~~~L~~L~L 340 (885)
+|++|++++|++++..+..|..+++|++|++++|. ++.+.+..|..+++|++|++++ |++++.
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i--------------- 96 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYI--------------- 96 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEE---------------
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEc---------------
Confidence 56666666666665544555566666666666664 5555555555555555555555 555544
Q ss_pred ecCccccccCccccCccccceeecccccccCCCccccccccccc---EEEccCC-cccccCccccccccccc-ceecccc
Q 047790 341 QYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALE---KLDLSSN-MLTRQIPKKIGNLTNIQ-ILKLNSN 415 (885)
Q Consensus 341 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~Ls~N 415 (885)
.+..|.++++|++|++++|.+++ +|. |..+++|+ +|++++| ++++..+..|..+++|+ .|++++|
T Consensus 97 --------~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n 166 (239)
T 2xwt_C 97 --------DPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNN 166 (239)
T ss_dssp --------CTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSC
T ss_pred --------CHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCC
Confidence 34444445555555555555544 232 55555555 7777777 66666666677777777 7777777
Q ss_pred cccCcCCCccCCCCcccEEEcCCcc-cCcceeEEEEeecCCcccCCCchhcccC-CCCCEEeccCccccCCCCCCccccc
Q 047790 416 FFDGIIPMEFGDCISLNTLDLGSNN-LNGCVVVVYLLLNNNMLSGKIPGSLSRL-TNLTTLNLFGNLLTGSIPPEFGDSL 493 (885)
Q Consensus 416 ~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~l~l~~n~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~ 493 (885)
+++.+.+..|.. ++|+.|++++|+ ++ +..+..|..+ ++|+.|++++|++++ +|.. .+.
T Consensus 167 ~l~~i~~~~~~~-~~L~~L~L~~n~~l~----------------~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~ 226 (239)
T 2xwt_C 167 GFTSVQGYAFNG-TKLDAVYLNKNKYLT----------------VIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLE 226 (239)
T ss_dssp CCCEECTTTTTT-CEEEEEECTTCTTCC----------------EECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCT
T ss_pred CCcccCHhhcCC-CCCCEEEcCCCCCcc----------------cCCHHHhhccccCCcEEECCCCcccc-CChh--Hhc
Confidence 776433334444 667777777663 54 1234456666 777777777777773 4433 455
Q ss_pred ccceeeeccc
Q 047790 494 KVQGLYLGHN 503 (885)
Q Consensus 494 ~L~~L~Ls~N 503 (885)
+|+.|+++++
T Consensus 227 ~L~~L~l~~~ 236 (239)
T 2xwt_C 227 HLKELIARNT 236 (239)
T ss_dssp TCSEEECTTC
T ss_pred cCceeeccCc
Confidence 6667776655
No 346
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=2.5e-24 Score=239.81 Aligned_cols=257 Identities=19% Similarity=0.218 Sum_probs=164.5
Q ss_pred ccccccccCCcceeeccccccCCCCCcc----cCCC-CceeEEeecC---ccccccCccccCccccceeecccccccCCC
Q 047790 302 IEDVFDRCTNLSELVLVNNRISGSIPEY----ISEL-PLKVFDLQYN---NFTGVIPVSLWNSENLMEFNAASNLLEGSL 373 (885)
Q Consensus 302 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~~-~L~~L~Ls~N---~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 373 (885)
++..+..+++|++|+|++|++++..+.. +... .|++|+|++| ++++.+|..+.. +
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~-----------------l 86 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRL-----------------L 86 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHH-----------------H
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHH-----------------H
Confidence 3445666777888888887776543322 3233 4555555553 233333332210 0
Q ss_pred cccccccccccEEEccCCcccc----cCcccccccccccceecccccccCcCCCccCC----C---------CcccEEEc
Q 047790 374 SWEISNAVALEKLDLSSNMLTR----QIPKKIGNLTNIQILKLNSNFFDGIIPMEFGD----C---------ISLNTLDL 436 (885)
Q Consensus 374 ~~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~----l---------~~L~~L~L 436 (885)
...+..+++|++|+|++|++++ .+|..+..+++|++|+|++|.+++..+..+.. + ++|++|+|
T Consensus 87 ~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L 166 (386)
T 2ca6_A 87 LQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIIC 166 (386)
T ss_dssp HHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEC
T ss_pred HHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEEC
Confidence 0112455666666666666665 35556666666666666666665433332222 2 78888888
Q ss_pred CCcccCcceeEEEEeecCCcccCCCc---hhcccCCCCCEEeccCcccc--C---CCCCCcccccccceeeeccccceec
Q 047790 437 GSNNLNGCVVVVYLLLNNNMLSGKIP---GSLSRLTNLTTLNLFGNLLT--G---SIPPEFGDSLKVQGLYLGHNQLTGS 508 (885)
Q Consensus 437 s~N~l~~~~~~~~l~l~~n~l~~~~p---~~l~~l~~L~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~g~ 508 (885)
++|+++ .+.+| ..+..+++|+.|+|++|+++ | ..|..+..+++|+.|+|++|+++..
T Consensus 167 ~~n~l~---------------~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~ 231 (386)
T 2ca6_A 167 GRNRLE---------------NGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHL 231 (386)
T ss_dssp CSSCCT---------------GGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHH
T ss_pred CCCCCC---------------cHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcH
Confidence 888775 12333 46777888888888888887 2 3455788888889999998888611
Q ss_pred cccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhc--cCcccccccccccccCCC--
Q 047790 509 IPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPEL--GNLVQLEYLDFSMNMLDG-- 584 (885)
Q Consensus 509 ~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~--~~l~~L~~L~Ls~N~l~~-- 584 (885)
-. +.+|..+..+++|+.|+|++|+++.... ..+|..+ +.+++|++|+|++|++++
T Consensus 232 g~------------~~l~~~l~~~~~L~~L~L~~n~i~~~~~---------~~l~~~l~~~~~~~L~~L~L~~n~i~~~g 290 (386)
T 2ca6_A 232 GS------------SALAIALKSWPNLRELGLNDCLLSARGA---------AAVVDAFSKLENIGLQTLRLQYNEIELDA 290 (386)
T ss_dssp HH------------HHHHHHGGGCTTCCEEECTTCCCCHHHH---------HHHHHHHHTCSSCCCCEEECCSSCCBHHH
T ss_pred HH------------HHHHHHHccCCCcCEEECCCCCCchhhH---------HHHHHHHhhccCCCeEEEECcCCcCCHHH
Confidence 00 0226677888899999999766642100 0256777 448899999999999986
Q ss_pred --CCCccc-cCccccceeecccCcCCCCCC
Q 047790 585 --HIPEKL-CSLPYLLYLNLADNRLEGEVP 611 (885)
Q Consensus 585 --~ip~~l-~~l~~L~~L~l~~N~l~~~~p 611 (885)
.+|..+ .++++|++|++++|++++..+
T Consensus 291 ~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 291 VRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 488877 568999999999999987654
No 347
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=1.2e-21 Score=210.57 Aligned_cols=194 Identities=26% Similarity=0.391 Sum_probs=123.1
Q ss_pred cCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCce
Q 047790 85 FNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKS 164 (885)
Q Consensus 85 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 164 (885)
..+++|++|++++|.++. ++ .+..+++|++|+|++|++++.. . +..+++|++|+|++|.+++. +.+..+++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~-~-~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~ 111 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLA-P-LKNLTKITELELSGNPLKNV--SAIAGLQSIKT 111 (308)
T ss_dssp HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCG-G-GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCE
T ss_pred HHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCCh-h-HccCCCCCEEEccCCcCCCc--hhhcCCCCCCE
Confidence 345667777777777653 33 5667777777777777776433 3 66777777777777777642 35666777777
Q ss_pred EEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceeccccc
Q 047790 165 LDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGP 244 (885)
Q Consensus 165 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~ 244 (885)
|++++|++++. +. +..+++|++|++++|+++ .++. +..+++|++|++++|++++.
T Consensus 112 L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~-~~~~--l~~l~~L~~L~l~~n~l~~~-------------------- 166 (308)
T 1h6u_A 112 LDLTSTQITDV-TP-LAGLSNLQVLYLDLNQIT-NISP--LAGLTNLQYLSIGNAQVSDL-------------------- 166 (308)
T ss_dssp EECTTSCCCCC-GG-GTTCTTCCEEECCSSCCC-CCGG--GGGCTTCCEEECCSSCCCCC--------------------
T ss_pred EECCCCCCCCc-hh-hcCCCCCCEEECCCCccC-cCcc--ccCCCCccEEEccCCcCCCC--------------------
Confidence 77777777643 22 666677777777777766 3433 56666666666666666521
Q ss_pred ccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCC
Q 047790 245 YQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISG 324 (885)
Q Consensus 245 ~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 324 (885)
++ +..+++|++|++++|++++..+ +..+++|++|+|++|++++..+ +..+++|+.|++++|++++
T Consensus 167 ----------~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 167 ----------TP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp ----------GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred ----------hh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 11 3445666677777777765433 5666677777777777766553 5666667777777666653
No 348
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.86 E-value=4.6e-23 Score=237.72 Aligned_cols=185 Identities=19% Similarity=0.183 Sum_probs=145.5
Q ss_pred eecceecccCCceEEEEEeCCCCeEEEEEecccccc--------cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 664 VFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQ--------CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 664 ~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~--------~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
...++||+|+||.||+|.. .++.+++|+....... ..+++.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3467999999999999954 5677888876432211 134578999999999999999776666677788999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+++++|.+++.. +..++.|++++++||| +++|+||||||+||+++. .+||+|||+++......
T Consensus 418 mE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 418 MSYINGKLAKDVIED---------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp EECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred EECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 999999999999875 5589999999999999 899999999999999998 99999999998875432
Q ss_pred CCc------ccCCCCCCccCCcccccC--CCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 816 SHV------STDTADTIGYVPSEYGQA--GRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 816 ~~~------~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
... .....+|+.|+|||++.. ..|+..+|+|+..+-..+-..++.+|.
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 111 124568999999999987 667888999999999999888887764
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=1.9e-21 Score=213.04 Aligned_cols=242 Identities=18% Similarity=0.158 Sum_probs=137.8
Q ss_pred cEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccE-EEee
Q 047790 139 ETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSY-LDVS 217 (885)
Q Consensus 139 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~-L~Ls 217 (885)
++++.++++++ .+|..+. +++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+|..+|.++++|++ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 56777777777 6666552 467777888887775555567777777777777777765677666777766654 4455
Q ss_pred cccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccC-C
Q 047790 218 NNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDG-N 296 (885)
Q Consensus 218 ~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~-N 296 (885)
.|+++...|. .|..+++|++|++++|++++..+..+....++..+++.+ +
T Consensus 89 ~N~l~~l~~~-----------------------------~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~ 139 (350)
T 4ay9_X 89 ANNLLYINPE-----------------------------AFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNI 139 (350)
T ss_dssp ETTCCEECTT-----------------------------SBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCT
T ss_pred CCcccccCch-----------------------------hhhhccccccccccccccccCCchhhcccchhhhhhhcccc
Confidence 5666532222 234455566666666666655555555555555555543 3
Q ss_pred CCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCccccCccccceeeccc-ccccCCCcc
Q 047790 297 MLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAAS-NLLEGSLSW 375 (885)
Q Consensus 297 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~~~ 375 (885)
.++.+.+..|..+.. .++.|+|++|+++.+.+..| ...+|+++++++ |.+..+.+.
T Consensus 140 ~i~~l~~~~f~~~~~----------------------~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~ 196 (350)
T 4ay9_X 140 NIHTIERNSFVGLSF----------------------ESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPND 196 (350)
T ss_dssp TCCEECTTSSTTSBS----------------------SCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTT
T ss_pred ccccccccchhhcch----------------------hhhhhccccccccCCChhhc-cccchhHHhhccCCcccCCCHH
Confidence 444444444433321 24444455555443322222 233455555542 444444444
Q ss_pred cccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCc
Q 047790 376 EISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSN 439 (885)
Q Consensus 376 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 439 (885)
.|.++++|++|+|++|+|+...+..|.++++|+.+++ +.++ .+| .+.++++|+.++++++
T Consensus 197 ~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 197 VFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLK-KLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp TTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCC-CCC-CTTTCCSCCEEECSCH
T ss_pred HhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcC-cCC-CchhCcChhhCcCCCC
Confidence 5666667777777777776555555555555555444 2333 344 3566666777666544
No 350
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=3.8e-21 Score=210.68 Aligned_cols=214 Identities=15% Similarity=0.174 Sum_probs=158.0
Q ss_pred CccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCC-cccCCCCC
Q 047790 107 QVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIP-SRLGDLTQ 185 (885)
Q Consensus 107 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~ 185 (885)
.+..++. +.++.++++++ .+|..+ .+++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+| .+|.++++
T Consensus 5 ~~C~C~~-~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~ 80 (350)
T 4ay9_X 5 RICHCSN-RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPK 80 (350)
T ss_dssp SSSEEET-TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTT
T ss_pred CccEeeC-CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchh
Confidence 3444543 67899999999 788876 4789999999999996666789999999999999999976655 57899998
Q ss_pred Ccc-ccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCC
Q 047790 186 LQD-LDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSML 264 (885)
Q Consensus 186 L~~-L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L 264 (885)
|++ +.++.|+++ .++...|..+++|++|++++|++++..+..+. ...++
T Consensus 81 l~~~l~~~~N~l~-~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~-----------------------------~~~~l 130 (350)
T 4ay9_X 81 LHEIRIEKANNLL-YINPEAFQNLPNLQYLLISNTGIKHLPDVHKI-----------------------------HSLQK 130 (350)
T ss_dssp CCEEEEEEETTCC-EECTTSBCCCTTCCEEEEEEECCSSCCCCTTC-----------------------------CBSSC
T ss_pred hhhhhcccCCccc-ccCchhhhhccccccccccccccccCCchhhc-----------------------------ccchh
Confidence 875 667789998 78778899999999999999999854333322 23346
Q ss_pred cEEEecC-CcccccccccccCCC-CCcEEEccCCCCcCcccccccccCCcceeeccc-cccCCCCCcccCCC-CceeEEe
Q 047790 265 KYISLSN-NKLSGPIPRELCNSG-SLVEINLDGNMLSGTIEDVFDRCTNLSELVLVN-NRISGSIPEYISEL-PLKVFDL 340 (885)
Q Consensus 265 ~~L~Ls~-N~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~~-~L~~L~L 340 (885)
..|++.+ ++++...+..|..+. .++.|+|++|+|+.+++.+|.. .+|++|++++ |.++...+..|..+ .|++||+
T Consensus 131 ~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~-~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdL 209 (350)
T 4ay9_X 131 VLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNG-TQLDELNLSDNNNLEELPNDVFHGASGPVILDI 209 (350)
T ss_dssp EEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTT-EEEEEEECTTCTTCCCCCTTTTTTEECCSEEEC
T ss_pred hhhhhccccccccccccchhhcchhhhhhccccccccCCChhhccc-cchhHHhhccCCcccCCCHHHhccCcccchhhc
Confidence 6677754 567655556666664 6889999999999887777754 5688888864 55554444455555 5666666
Q ss_pred ecCccccccCccccC
Q 047790 341 QYNNFTGVIPVSLWN 355 (885)
Q Consensus 341 s~N~l~~~~p~~~~~ 355 (885)
++|+++...+..+.+
T Consensus 210 s~N~l~~lp~~~~~~ 224 (350)
T 4ay9_X 210 SRTRIHSLPSYGLEN 224 (350)
T ss_dssp TTSCCCCCCSSSCTT
T ss_pred CCCCcCccChhhhcc
Confidence 666666554444433
No 351
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.85 E-value=6.4e-21 Score=195.26 Aligned_cols=167 Identities=26% Similarity=0.282 Sum_probs=142.6
Q ss_pred CCCCCCCCCCCcccCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCC
Q 047790 43 VLSGWNKTTRHCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGEN 122 (885)
Q Consensus 43 ~~~~w~~~~~~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 122 (885)
...-|..+.+.|+|.+|.|+..+++ .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|
T Consensus 8 ~~~~~~~~~~~Cs~~~v~c~~~~l~-----------~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N 74 (229)
T 3e6j_A 8 HHSAACPSQCSCSGTTVDCRSKRHA-----------SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSN 74 (229)
T ss_dssp ---CCCCTTCEEETTEEECTTSCCS-----------SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred hhhccCCCCCEEeCCEeEccCCCcC-----------ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCC
Confidence 3445667889999999999765432 4555443 88999999999999988999999999999999999
Q ss_pred cCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCc
Q 047790 123 QLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPV 202 (885)
Q Consensus 123 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 202 (885)
+|+...+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+++ .+|.
T Consensus 75 ~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~~~~ 152 (229)
T 3e6j_A 75 QLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK-SIPH 152 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCC-CCCT
T ss_pred CCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCC-ccCH
Confidence 998666677899999999999999999777778899999999999999999 78888999999999999999998 6777
Q ss_pred ccccccccccEEEeecccCccc
Q 047790 203 SLLKNLQSLSYLDVSNNLLSGN 224 (885)
Q Consensus 203 ~~~~~l~~L~~L~Ls~N~l~~~ 224 (885)
..+..+++|++|++++|.+...
T Consensus 153 ~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 153 GAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp TTTTTCTTCCEEECTTSCBCTT
T ss_pred HHHhCCCCCCEEEeeCCCccCC
Confidence 7789999999999999998743
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=3e-21 Score=222.28 Aligned_cols=190 Identities=23% Similarity=0.322 Sum_probs=100.2
Q ss_pred CcceeeccccccCCCCCcccCCCCceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccC
Q 047790 311 NLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSS 390 (885)
Q Consensus 311 ~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~ 390 (885)
+|+.|+|++|.+++ +|..+. ..|++|+|++|+++. +| ..+++|++|+|++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~-~~L~~L~Ls~N~l~~-ip---------------------------~~l~~L~~L~Ls~ 109 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP-PQITVLEITQNALIS-LP---------------------------ELPASLEYLDACD 109 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC-TTCSEEECCSSCCSC-CC---------------------------CCCTTCCEEECCS
T ss_pred CccEEEeCCCCCCc-cCHhHc-CCCCEEECcCCCCcc-cc---------------------------cccCCCCEEEccC
Confidence 67777777777765 333221 245555555555552 22 1234455555555
Q ss_pred CcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCC
Q 047790 391 NMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTN 470 (885)
Q Consensus 391 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~ 470 (885)
|+|++ +|. +.. +|+.|+|++|+|++ +|. .+++|+.|+|++|+|+ .+|. .+++
T Consensus 110 N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~-----------------~lp~---~l~~ 161 (571)
T 3cvr_A 110 NRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLT-----------------MLPE---LPTS 161 (571)
T ss_dssp SCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCS-----------------CCCC---CCTT
T ss_pred CCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccC-----------------cCCC---cCCC
Confidence 55554 333 333 55555555555554 333 3455566666555554 2333 3455
Q ss_pred CCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccc-----cccCcEEEccCCCC
Q 047790 471 LTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGN-----LNGLTHLDLSCNEL 545 (885)
Q Consensus 471 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~-----l~~L~~L~Ls~N~l 545 (885)
|+.|+|++|+|++ +|. |. .+|+.|+|++|+|+ .+ |. |.. .+.|+.|+|++|+|
T Consensus 162 L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l----------------p~-~~~~L~~~~~~L~~L~Ls~N~l 219 (571)
T 3cvr_A 162 LEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL----------------PA-VPVRNHHSEETEIFFRCRENRI 219 (571)
T ss_dssp CCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC----------------CC-CC--------CCEEEECCSSCC
T ss_pred cCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch----------------hh-HHHhhhcccccceEEecCCCcc
Confidence 6666666666654 444 44 55666666666655 22 22 221 12226666665544
Q ss_pred CCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCcc
Q 047790 546 DGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLP 594 (885)
Q Consensus 546 ~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~ 594 (885)
+ .||..+..+++|++|+|++|+|++.+|..+..++
T Consensus 220 ~--------------~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 220 T--------------HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp C--------------CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred e--------------ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 4 4566666666666666666666666666655543
No 353
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=1.3e-20 Score=190.17 Aligned_cols=163 Identities=26% Similarity=0.252 Sum_probs=120.5
Q ss_pred ccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCC
Q 047790 381 VALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGK 460 (885)
Q Consensus 381 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~ 460 (885)
++|++|++++|++++..+..|..+++|++|++++|+++++.+..|..+++|++|++++|+++ +.
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~----------------~~ 91 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQ----------------SL 91 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC----------------CC
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCC----------------cc
Confidence 36777777777777666666777788888888888887766666777888888888877774 23
Q ss_pred CchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEc
Q 047790 461 IPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDL 540 (885)
Q Consensus 461 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~L 540 (885)
.+..+..+++|++|++++|++++..+..|..+++|+.|++++|++++.. +..|..+++|+.|+|
T Consensus 92 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~----------------~~~~~~l~~L~~L~l 155 (208)
T 2o6s_A 92 PNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVP----------------DGVFDRLTSLQYIWL 155 (208)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC----------------TTTTTTCTTCCEEEC
T ss_pred CHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeC----------------HHHhccCCCccEEEe
Confidence 3445677888888888888888666666778888888888888877432 445777888888888
Q ss_pred cCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccc
Q 047790 541 SCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPY 595 (885)
Q Consensus 541 s~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~ 595 (885)
++|++. +.+++|++|+++.|+++|.+|.+++.++.
T Consensus 156 ~~N~~~--------------------~~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 156 HDNPWD--------------------CTCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CSCCBC--------------------CCTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred cCCCee--------------------cCCCCHHHHHHHHHhCCceeeccCccccC
Confidence 866543 23567888888888888888888877664
No 354
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=1.2e-19 Score=192.94 Aligned_cols=190 Identities=24% Similarity=0.331 Sum_probs=138.2
Q ss_pred cceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCC
Q 047790 359 LMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGS 438 (885)
Q Consensus 359 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 438 (885)
+..+.+..+.+.... .+..+++|+.|++++|.++.. + .+..+++|+.|+|++|++++..+ +..+++|++|++++
T Consensus 26 ~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccccc--chhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 344445555544332 245677788888888888754 3 47778888888888888886554 78888888888888
Q ss_pred cccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccC
Q 047790 439 NNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSG 518 (885)
Q Consensus 439 N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~ 518 (885)
|+++ .+| .+..+++|+.|++++|++++. +.+..+++|+.|++++|++++
T Consensus 100 n~l~-----------------~~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~----------- 148 (291)
T 1h6t_A 100 NKVK-----------------DLS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITD----------- 148 (291)
T ss_dssp SCCC-----------------CGG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCC-----------
T ss_pred CcCC-----------------CCh-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCc-----------
Confidence 8875 223 377788888888888888753 457788888888888888773
Q ss_pred CccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccce
Q 047790 519 NKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLY 598 (885)
Q Consensus 519 n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~ 598 (885)
+ ..++.+++|+.|+|++|+++ .+++ +..+++|++|++++|++++ +| .+..+++|+.
T Consensus 149 ------~-~~l~~l~~L~~L~L~~N~l~--------------~~~~-l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~ 204 (291)
T 1h6t_A 149 ------I-TVLSRLTKLDTLSLEDNQIS--------------DIVP-LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDV 204 (291)
T ss_dssp ------C-GGGGGCTTCSEEECCSSCCC--------------CCGG-GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSE
T ss_pred ------c-hhhccCCCCCEEEccCCccc--------------cchh-hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCE
Confidence 1 45778888888888866665 2333 7788888888888888874 55 4788888888
Q ss_pred eecccCcCCCC
Q 047790 599 LNLADNRLEGE 609 (885)
Q Consensus 599 L~l~~N~l~~~ 609 (885)
|++++|+++..
T Consensus 205 L~l~~n~i~~~ 215 (291)
T 1h6t_A 205 LELFSQECLNK 215 (291)
T ss_dssp EEEEEEEEECC
T ss_pred EECcCCcccCC
Confidence 88888888763
No 355
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.81 E-value=2.5e-20 Score=196.69 Aligned_cols=144 Identities=14% Similarity=0.070 Sum_probs=115.6
Q ss_pred EEeecceecccCCceEEEEEeCCCCeEEEEEecccccc------------------cHHHHHHHHHHhcccCCCCcccee
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQ------------------CDREFAAEMETLDMVKHQNLVQLL 723 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~------------------~~~~~~~E~~~l~~l~~~~i~~~~ 723 (885)
.|.+.+.||+|+||.||+|.+.+++.||+|+++..... ....+.+|++++++++ | +++.
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~ 167 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVP 167 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSC
T ss_pred EEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcC
Confidence 35677999999999999999977999999998643211 2356889999999998 4 6666
Q ss_pred eeeEeCCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEe
Q 047790 724 GYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVS 803 (885)
Q Consensus 724 ~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~ 803 (885)
+++.. +..|+||||++|++|.+ +.. .....++.|++.|++||| +.||+||||||+||+++ ++.+||+
T Consensus 168 ~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~-~~~vkl~ 234 (282)
T 1zar_A 168 KVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS-EEGIWII 234 (282)
T ss_dssp CEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE-TTEEEEC
T ss_pred eEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE-CCcEEEE
Confidence 65543 55699999999999988 421 124579999999999999 99999999999999999 9999999
Q ss_pred eccCcccccCCCCCcccCCCCCCccCCccccc
Q 047790 804 DFGLARLISDCESHVSTDTADTIGYVPSEYGQ 835 (885)
Q Consensus 804 Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~ 835 (885)
|||.|... ..+.|||++.
T Consensus 235 DFG~a~~~--------------~~~~a~e~l~ 252 (282)
T 1zar_A 235 DFPQSVEV--------------GEEGWREILE 252 (282)
T ss_dssp CCTTCEET--------------TSTTHHHHHH
T ss_pred ECCCCeEC--------------CCCCHHHHHH
Confidence 99998643 2356788754
No 356
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=1.1e-19 Score=184.66 Aligned_cols=156 Identities=22% Similarity=0.277 Sum_probs=131.7
Q ss_pred CcccCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccc
Q 047790 53 HCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQL 132 (885)
Q Consensus 53 ~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~ 132 (885)
.|.|..|.|... +++ .+|..+. ++|++|+|++|.+++..+..|..+++|++|+|++|+|++..|..|
T Consensus 10 ~C~~~~v~c~~~----------~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~ 76 (220)
T 2v9t_B 10 TCSNNIVDCRGK----------GLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAF 76 (220)
T ss_dssp EEETTEEECTTS----------CCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTT
T ss_pred EECCCEEEcCCC----------CcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHh
Confidence 366766666543 333 3555443 689999999999988777789999999999999999998888999
Q ss_pred cccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCccccccccccc
Q 047790 133 GLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLS 212 (885)
Q Consensus 133 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~ 212 (885)
..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+++ .++...|..+++|+
T Consensus 77 ~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~ 155 (220)
T 2v9t_B 77 QGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ-TIAKGTFSPLRAIQ 155 (220)
T ss_dssp TTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCC
T ss_pred hCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCC-EECHHHHhCCCCCC
Confidence 99999999999999999666667889999999999999999888889999999999999999998 67767788899999
Q ss_pred EEEeecccCc
Q 047790 213 YLDVSNNLLS 222 (885)
Q Consensus 213 ~L~Ls~N~l~ 222 (885)
+|++++|++.
T Consensus 156 ~L~L~~N~~~ 165 (220)
T 2v9t_B 156 TMHLAQNPFI 165 (220)
T ss_dssp EEECCSSCEE
T ss_pred EEEeCCCCcC
Confidence 9999999886
No 357
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=1e-19 Score=212.12 Aligned_cols=193 Identities=22% Similarity=0.304 Sum_probs=129.6
Q ss_pred CCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEc
Q 047790 88 SSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDF 167 (885)
Q Consensus 88 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 167 (885)
..+..++|+.+.+.+..+ +..|++|+.|+|++|.+.. +| .+..+++|++|+|++|.+++..| +..+++|+.|+|
T Consensus 21 ~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 94 (605)
T 1m9s_A 21 AETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFL 94 (605)
T ss_dssp HHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEEC
T ss_pred HHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEEC
Confidence 334556666666654332 5667777777777777763 34 47777788888888887775444 777778888888
Q ss_pred cCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccc
Q 047790 168 SGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQL 247 (885)
Q Consensus 168 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~ 247 (885)
++|+|++ +| .+..+++|++|+|++|+++ .++. +..+++|+.|+|++|++++. .
T Consensus 95 s~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~-~l~~--l~~l~~L~~L~Ls~N~l~~l--~-------------------- 147 (605)
T 1m9s_A 95 DENKIKD-LS-SLKDLKKLKSLSLEHNGIS-DING--LVHLPQLESLYLGNNKITDI--T-------------------- 147 (605)
T ss_dssp CSSCCCC-CT-TSTTCTTCCEEECTTSCCC-CCGG--GGGCTTCSEEECCSSCCCCC--G--------------------
T ss_pred cCCCCCC-Ch-hhccCCCCCEEEecCCCCC-CCcc--ccCCCccCEEECCCCccCCc--h--------------------
Confidence 8887774 33 5777778888888888877 4432 67777888888888777632 1
Q ss_pred cccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCC
Q 047790 248 SLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSI 326 (885)
Q Consensus 248 ~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 326 (885)
.+..+++|+.|+|++|++++..| +..+++|+.|+|++|.|++. ..+..+++|+.|+|++|++.+..
T Consensus 148 ---------~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 148 ---------VLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKP 213 (605)
T ss_dssp ---------GGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCC
T ss_pred ---------hhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCc
Confidence 23445566677777777765555 66677777777777777664 23666777777777777766543
No 358
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=7.1e-20 Score=201.41 Aligned_cols=152 Identities=26% Similarity=0.282 Sum_probs=86.5
Q ss_pred cEEEccCCcccccCcccccccccccceecccccccCcCCCccC-CCCcccEEEcCCcccCcceeEEEEeecCCcccCCCc
Q 047790 384 EKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFG-DCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIP 462 (885)
Q Consensus 384 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p 462 (885)
+.+++++|+++. +|..+. +.++.|+|++|+|+++.+..|. .+++|++|+|++|+|+ +..|
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~----------------~i~~ 81 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLN----------------FISS 81 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCC----------------EECT
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCC----------------ccCh
Confidence 456666666653 444332 2456666666666665555565 6666666666666654 2233
Q ss_pred hhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccC
Q 047790 463 GSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSC 542 (885)
Q Consensus 463 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~ 542 (885)
..|.++++|+.|+|++|+|++..+..|..+.+|+.|+|++|++++.. |..|..+++|+.|+|++
T Consensus 82 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~----------------~~~~~~l~~L~~L~L~~ 145 (361)
T 2xot_A 82 EAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVD----------------RNAFEDMAQLQKLYLSQ 145 (361)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEEC----------------TTTTTTCTTCCEEECCS
T ss_pred hhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEEC----------------HHHhCCcccCCEEECCC
Confidence 45666666666666666666555555666666666666666665432 45556666666666665
Q ss_pred CCCCCceeeeecccccccccchhc----cCcccccccccccccCCC
Q 047790 543 NELDGIVGLYVQSNKFYGEIPPEL----GNLVQLEYLDFSMNMLDG 584 (885)
Q Consensus 543 N~l~~~~~l~~~~n~l~g~ip~~~----~~l~~L~~L~Ls~N~l~~ 584 (885)
|+|+ .+|..+ ..+++|++|||++|+|++
T Consensus 146 N~l~--------------~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 146 NQIS--------------RFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCC--------------SCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCC--------------eeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 5544 223222 345566666666666653
No 359
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.80 E-value=1e-20 Score=226.20 Aligned_cols=203 Identities=20% Similarity=0.241 Sum_probs=119.7
Q ss_pred CCHHHHHHHHHHHHhCCC--CCCCCCCC-CCCCCcccCCccccCCcEEEEEEecccccccccccccCCCCCCE-----Ee
Q 047790 23 EPKQERRSLVHFKNSLQN--PQVLSGWN-KTTRHCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRI-----LD 94 (885)
Q Consensus 23 ~~~~~~~aLl~~k~~~~~--~~~~~~w~-~~~~~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~-----L~ 94 (885)
....+|++|+++..+... ...-..|. ..+..+.|.++.+...+++.+++..+++.. ++..+.....|+. ++
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~ 207 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTPLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDD 207 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecCCccceEEeeCCCCCc-chhhHhhcCccCcccccCcc
Confidence 456788999999988743 23344563 345678899999999999999999888876 3433333222222 22
Q ss_pred cCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCc
Q 047790 95 LSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNG 174 (885)
Q Consensus 95 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 174 (885)
++.|.+. ..+..+..++.|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|+.+++|++|+|++|+|+
T Consensus 208 ~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~- 283 (727)
T 4b8c_D 208 DIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT- 283 (727)
T ss_dssp ---------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-
T ss_pred cccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-
Confidence 3333333 45778899999999999999998 78888889999999999999999 88999999999999999999999
Q ss_pred cCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCC
Q 047790 175 TIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNL 232 (885)
Q Consensus 175 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 232 (885)
.+|..|+++++|++|+|++|.|+ .+|.. |..+++|++|+|++|++++.+|..+..+
T Consensus 284 ~lp~~~~~l~~L~~L~L~~N~l~-~lp~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 339 (727)
T 4b8c_D 284 SLPAELGSCFQLKYFYFFDNMVT-TLPWE-FGNLCNLQFLGVEGNPLEKQFLKILTEK 339 (727)
T ss_dssp SCCSSGGGGTTCSEEECCSSCCC-CCCSS-TTSCTTCCCEECTTSCCCSHHHHHHHHH
T ss_pred ccChhhcCCCCCCEEECCCCCCC-ccChh-hhcCCCccEEeCCCCccCCCChHHHhhc
Confidence 77999999999999999999997 88887 8899999999999999998888776543
No 360
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=1.2e-19 Score=184.38 Aligned_cols=157 Identities=20% Similarity=0.208 Sum_probs=101.7
Q ss_pred ceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCC
Q 047790 409 ILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPE 488 (885)
Q Consensus 409 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 488 (885)
.+++++|.++. +|..+. ..+++|+|++|+|++.. .+..|..+++|+.|+|++|++++..+..
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~---------------~~~~~~~l~~L~~L~L~~N~i~~i~~~~ 76 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLE---------------ATGIFKKLPQLRKINFSNNKITDIEEGA 76 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEEC---------------CCCCGGGCTTCCEEECCSSCCCEECTTT
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccC---------------chhhhccCCCCCEEECCCCcCCEECHHH
Confidence 45555555553 343332 23456666666554210 1234566667777777777777666666
Q ss_pred cccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccC
Q 047790 489 FGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGN 568 (885)
Q Consensus 489 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~ 568 (885)
|..+++|+.|+|++|++++.. |..|..+++|+.|+|++|++ ++..|..+..
T Consensus 77 ~~~l~~L~~L~Ls~N~l~~~~----------------~~~~~~l~~L~~L~Ls~N~l-------------~~~~~~~~~~ 127 (220)
T 2v70_A 77 FEGASGVNEILLTSNRLENVQ----------------HKMFKGLESLKTLMLRSNRI-------------TCVGNDSFIG 127 (220)
T ss_dssp TTTCTTCCEEECCSSCCCCCC----------------GGGGTTCSSCCEEECTTSCC-------------CCBCTTSSTT
T ss_pred hCCCCCCCEEECCCCccCccC----------------HhHhcCCcCCCEEECCCCcC-------------CeECHhHcCC
Confidence 777777777777777776433 45577777777777774444 3345667777
Q ss_pred cccccccccccccCCCCCCccccCccccceeecccCcCCCCCCC
Q 047790 569 LVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPR 612 (885)
Q Consensus 569 l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~ 612 (885)
+++|++|+|++|++++..|..+..+++|++|++++|++.+..+.
T Consensus 128 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 171 (220)
T 2v70_A 128 LSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYL 171 (220)
T ss_dssp CTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGG
T ss_pred CccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCch
Confidence 88888888888888877777888888888888888887765543
No 361
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=4.9e-19 Score=179.92 Aligned_cols=148 Identities=25% Similarity=0.367 Sum_probs=106.5
Q ss_pred CCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEE
Q 047790 460 KIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLD 539 (885)
Q Consensus 460 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~ 539 (885)
.+|..+. ++|+.|+|++|++++..+..|..+++|+.|+|++|++++.. |.+|..+++|+.|+
T Consensus 25 ~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~----------------~~~~~~l~~L~~L~ 86 (220)
T 2v9t_B 25 EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELA----------------PDAFQGLRSLNSLV 86 (220)
T ss_dssp SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEEC----------------TTTTTTCSSCCEEE
T ss_pred cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcC----------------HHHhhCCcCCCEEE
Confidence 4455443 56777777777777666667777777777777777777543 66777777788888
Q ss_pred ccCCCCCCceeeeecccccccccch-hccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCC-Ccccc
Q 047790 540 LSCNELDGIVGLYVQSNKFYGEIPP-ELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPR-SGICQ 617 (885)
Q Consensus 540 Ls~N~l~~~~~l~~~~n~l~g~ip~-~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~-~~~~~ 617 (885)
|++|+++ .+|. .|..+++|++|+|++|++++..|..+..+++|++|+|++|++++.++. ...+.
T Consensus 87 Ls~N~l~--------------~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 152 (220)
T 2v9t_B 87 LYGNKIT--------------ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLR 152 (220)
T ss_dssp CCSSCCC--------------CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCT
T ss_pred CCCCcCC--------------ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCC
Confidence 8766555 3333 356778888888888888877777777888888888888888776654 34566
Q ss_pred ccccccccCCccccccccCCcccccccc
Q 047790 618 NLSIISLTGNKDLCEKIMGSDCQILTFG 645 (885)
Q Consensus 618 ~~~~~~~~~N~~~c~~~~~~~c~~~~~~ 645 (885)
+++.+++.+|||.| +|...|+.
T Consensus 153 ~L~~L~L~~N~~~c------~c~l~~l~ 174 (220)
T 2v9t_B 153 AIQTMHLAQNPFIC------DCHLKWLA 174 (220)
T ss_dssp TCCEEECCSSCEEC------SGGGHHHH
T ss_pred CCCEEEeCCCCcCC------CCccHHHH
Confidence 77788888888888 78887754
No 362
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=2.5e-19 Score=197.02 Aligned_cols=175 Identities=28% Similarity=0.287 Sum_probs=147.6
Q ss_pred EEEecccccccccccccCCCCCCEEecCCCcccCcCCcCcc-CcCCCCEEeccCCcCCCCCCccccccccccEeeeeccC
Q 047790 69 LVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVS-NLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNS 147 (885)
Q Consensus 69 l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 147 (885)
+++++++++ .+|..+. +.+++|+|++|.+++..+..+. .+++|++|+|++|+|++..|..|..+++|++|+|++|+
T Consensus 23 l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~ 99 (361)
T 2xot_A 23 LSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNH 99 (361)
T ss_dssp EECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCc
Confidence 455556665 3666553 4589999999999988888888 99999999999999998888889999999999999999
Q ss_pred CCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccc---cccccccEEEeecccCccc
Q 047790 148 FTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLL---KNLQSLSYLDVSNNLLSGN 224 (885)
Q Consensus 148 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~~l~~L~~L~Ls~N~l~~~ 224 (885)
|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+++ .+|...| ..+++|++|+|++|+|++.
T Consensus 100 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 100 LHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred CCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-eeCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 99877888999999999999999999888999999999999999999998 7888877 5799999999999999965
Q ss_pred CCccccCCCcc--cceecccccccc
Q 047790 225 IPPEIGNLKKL--SDLYLGIGPYQL 247 (885)
Q Consensus 225 ~p~~~~~l~~L--~~L~l~~n~~~~ 247 (885)
.+..+..++.+ +.|+++.|++.+
T Consensus 179 ~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 179 PLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred CHHHhhhccHhhcceEEecCCCccC
Confidence 55666666653 566666665544
No 363
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=4.7e-21 Score=222.06 Aligned_cols=110 Identities=31% Similarity=0.341 Sum_probs=85.4
Q ss_pred CCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCce
Q 047790 470 NLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIV 549 (885)
Q Consensus 470 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 549 (885)
.|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|..|+.+++|+.|+|++|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-----------------~lp~~~~~l~~L~~L~Ls~N~l~--- 499 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-----------------ALPPALAALRCLEVLQASDNALE--- 499 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-----------------CCCGGGGGCTTCCEEECCSSCCC---
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-----------------ccchhhhcCCCCCEEECCCCCCC---
Confidence 47788888888875 565 888888888888888877 33677888888888888865554
Q ss_pred eeeecccccccccchhccCcccccccccccccCCCCC-CccccCccccceeecccCcCCCCCCCC
Q 047790 550 GLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHI-PEKLCSLPYLLYLNLADNRLEGEVPRS 613 (885)
Q Consensus 550 ~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~i-p~~l~~l~~L~~L~l~~N~l~~~~p~~ 613 (885)
.+| .++++++|++|+|++|+|++.+ |..++.+++|++|+|++|++++.+|..
T Consensus 500 -----------~lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 500 -----------NVD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp -----------CCG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred -----------CCc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 356 7788888888888888888766 888888888888888888888876654
No 364
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=7.8e-19 Score=178.43 Aligned_cols=152 Identities=18% Similarity=0.201 Sum_probs=122.3
Q ss_pred EEEEecccccccccccccCCCCCCEEecCCCcccCcCC-cCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeecc
Q 047790 68 SLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLS-PQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSN 146 (885)
Q Consensus 68 ~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N 146 (885)
.++++++.++ .+|..+. +.+++|+|++|.+++..+ ..|+.+++|++|+|++|+|++..|..|+.+++|++|+|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 3444555555 3666553 346889999999887755 45788999999999999998777778889999999999999
Q ss_pred CCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcc
Q 047790 147 SFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSG 223 (885)
Q Consensus 147 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~ 223 (885)
++++..|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+++ .++...|..+++|++|++++|.+++
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQIT-TVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCC-CBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCC-EECHHHhcCCCCCCEEEecCcCCcC
Confidence 998777778888999999999999998888888888999999999999988 4544458888888899998888874
No 365
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=6.2e-19 Score=205.47 Aligned_cols=141 Identities=25% Similarity=0.286 Sum_probs=63.8
Q ss_pred EEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccc
Q 047790 338 FDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFF 417 (885)
Q Consensus 338 L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 417 (885)
+.++.+.+....+ +..+++|+.|++++|.+.... .+..+++|+.|+|++|++++..| +..+++|+.|+|++|.|
T Consensus 26 l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l 99 (605)
T 1m9s_A 26 DNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKI 99 (605)
T ss_dssp HHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCCT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCC
T ss_pred HhccCCCcccccc--hhcCCCCCEEECcCCCCCCCh--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCC
Confidence 3344444443322 234445555555555544321 24445555555555555544333 44455555555555555
Q ss_pred cCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccce
Q 047790 418 DGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQG 497 (885)
Q Consensus 418 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 497 (885)
++. | .+..+++|+.|+|++|+++ .+ ..+..+++|+.|+|++|++++. +.+..+++|+.
T Consensus 100 ~~l-~-~l~~l~~L~~L~Ls~N~l~-----------------~l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~ 157 (605)
T 1m9s_A 100 KDL-S-SLKDLKKLKSLSLEHNGIS-----------------DI-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDT 157 (605)
T ss_dssp CCC-T-TSTTCTTCCEEECTTSCCC-----------------CC-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSE
T ss_pred CCC-h-hhccCCCCCEEEecCCCCC-----------------CC-ccccCCCccCEEECCCCccCCc--hhhcccCCCCE
Confidence 431 2 3444455555555544443 11 2244444555555555544432 33444444444
Q ss_pred eeeccccce
Q 047790 498 LYLGHNQLT 506 (885)
Q Consensus 498 L~Ls~N~l~ 506 (885)
|+|++|+++
T Consensus 158 L~Ls~N~l~ 166 (605)
T 1m9s_A 158 LSLEDNQIS 166 (605)
T ss_dssp EECCSSCCC
T ss_pred EECcCCcCC
Confidence 444444444
No 366
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=2.5e-21 Score=224.32 Aligned_cols=106 Identities=23% Similarity=0.243 Sum_probs=69.3
Q ss_pred ccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCc
Q 047790 383 LEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIP 462 (885)
Q Consensus 383 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p 462 (885)
|+.|+|++|+|++ +|. ++.+++|+.|+|++|+|+ .+|..|..+++|+.|+|++|+|+ .+|
T Consensus 443 L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-----------------~lp 502 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-----------------NVD 502 (567)
T ss_dssp CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-----------------CCG
T ss_pred ceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCC-----------------CCc
Confidence 6666666666664 344 666666666777766666 45666666666777766666664 245
Q ss_pred hhcccCCCCCEEeccCccccCCC-CCCcccccccceeeeccccceecc
Q 047790 463 GSLSRLTNLTTLNLFGNLLTGSI-PPEFGDSLKVQGLYLGHNQLTGSI 509 (885)
Q Consensus 463 ~~l~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~g~~ 509 (885)
.++.+++|+.|+|++|+|++.. |..++.+++|+.|+|++|++++.+
T Consensus 503 -~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 503 -GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 549 (567)
T ss_dssp -GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred -ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCc
Confidence 5666667777777777776555 666666777777777777666543
No 367
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.77 E-value=9.2e-19 Score=183.13 Aligned_cols=170 Identities=23% Similarity=0.295 Sum_probs=96.8
Q ss_pred cccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccC
Q 047790 380 AVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSG 459 (885)
Q Consensus 380 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~ 459 (885)
+.+++.+++++|.+++.. .+..+++|+.|++++|.++. +| .+..+++|++|+|++|+++
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~----------------- 76 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQIS----------------- 76 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCC-----------------
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccC-----------------
Confidence 344555555555555322 34555556666666665553 23 4555566666666665554
Q ss_pred CCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEE
Q 047790 460 KIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLD 539 (885)
Q Consensus 460 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~ 539 (885)
.+|. +..+++|+.|+|++|++++ +|.... .+|+.|++++|++++ ...+..+++|+.|+
T Consensus 77 ~~~~-l~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~L~~N~l~~------------------~~~l~~l~~L~~L~ 134 (263)
T 1xeu_A 77 DLSP-LKDLTKLEELSVNRNRLKN-LNGIPS--ACLSRLFLDNNELRD------------------TDSLIHLKNLEILS 134 (263)
T ss_dssp CCGG-GTTCSSCCEEECCSSCCSC-CTTCCC--SSCCEEECCSSCCSB------------------SGGGTTCTTCCEEE
T ss_pred CChh-hccCCCCCEEECCCCccCC-cCcccc--CcccEEEccCCccCC------------------ChhhcCcccccEEE
Confidence 2222 5556666666666666653 333222 566666666666653 12356666667777
Q ss_pred ccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCC
Q 047790 540 LSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGE 609 (885)
Q Consensus 540 Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~ 609 (885)
|++|+++ .+| .++.+++|++|+|++|++++. ..+..+++|++|++++|++++.
T Consensus 135 Ls~N~i~--------------~~~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 135 IRNNKLK--------------SIV-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CTTSCCC--------------BCG-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCCcCC--------------CCh-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 6655554 223 456666777777777777643 5566677777777777776654
No 368
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.77 E-value=1.7e-18 Score=184.06 Aligned_cols=84 Identities=24% Similarity=0.328 Sum_probs=42.5
Q ss_pred ccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCccc
Q 047790 353 LWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLN 432 (885)
Q Consensus 353 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 432 (885)
+..+++|++|++++|.+.+. ..+..+++|+.|++++|++++. ..+..+++|+.|+|++|++++..| +..+++|+
T Consensus 108 l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~ 181 (291)
T 1h6t_A 108 LKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQ 181 (291)
T ss_dssp GTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCC
T ss_pred hccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccC
Confidence 44444444455544444432 2344555555555555555543 345555555555555555554333 55555555
Q ss_pred EEEcCCcccC
Q 047790 433 TLDLGSNNLN 442 (885)
Q Consensus 433 ~L~Ls~N~l~ 442 (885)
.|++++|+++
T Consensus 182 ~L~L~~N~i~ 191 (291)
T 1h6t_A 182 NLYLSKNHIS 191 (291)
T ss_dssp EEECCSSCCC
T ss_pred EEECCCCcCC
Confidence 5555555553
No 369
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.76 E-value=5.8e-18 Score=173.20 Aligned_cols=150 Identities=22% Similarity=0.289 Sum_probs=126.1
Q ss_pred CEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCC
Q 047790 91 RILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGN 170 (885)
Q Consensus 91 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 170 (885)
+.++.+++.++ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|+...+..|..+++|++|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 45788888885 5666554 89999999999999988999999999999999999998666677899999999999999
Q ss_pred cCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccc
Q 047790 171 GLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPY 245 (885)
Q Consensus 171 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~ 245 (885)
+|++..+..|..+++|++|+|++|+++ .+|.. +..+++|++|+|++|++++..+..+..+++|+.|++++|++
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 171 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRG-IERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPW 171 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTT-GGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCB
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcc-cccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCc
Confidence 999877788899999999999999998 88877 68899999999999999865555566665555555554443
No 370
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=1.3e-18 Score=173.78 Aligned_cols=155 Identities=19% Similarity=0.257 Sum_probs=121.4
Q ss_pred ccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCcc
Q 047790 401 IGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNL 480 (885)
Q Consensus 401 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~ 480 (885)
...+++|+.|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~------------------~~~~l~~l~~L~~L~l~~n~ 99 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT------------------NYNPISGLSNLERLRIMGKD 99 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS------------------CCGGGTTCTTCCEEEEECTT
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC------------------cchhhhcCCCCCEEEeECCc
Confidence 356777888888888887 345 5777888888888888663 23467788889999999999
Q ss_pred ccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCC-CCCceeeeecccccc
Q 047790 481 LTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNE-LDGIVGLYVQSNKFY 559 (885)
Q Consensus 481 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~l~~~~n~l~ 559 (885)
+++..|..+..+++|+.|++++|++++.. |..++.+++|+.|+|++|+ ++
T Consensus 100 l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~----------------~~~l~~l~~L~~L~L~~n~~i~------------- 150 (197)
T 4ezg_A 100 VTSDKIPNLSGLTSLTLLDISHSAHDDSI----------------LTKINTLPKVNSIDLSYNGAIT------------- 150 (197)
T ss_dssp CBGGGSCCCTTCTTCCEEECCSSBCBGGG----------------HHHHTTCSSCCEEECCSCTBCC-------------
T ss_pred cCcccChhhcCCCCCCEEEecCCccCcHh----------------HHHHhhCCCCCEEEccCCCCcc-------------
Confidence 88777888888999999999999888644 6678888999999999776 44
Q ss_pred cccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCC
Q 047790 560 GEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEG 608 (885)
Q Consensus 560 g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~ 608 (885)
.+| .+..+++|++|++++|++++ +| .+..+++|++|++++|++.+
T Consensus 151 -~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 151 -DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp -CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred -ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 455 68889999999999999984 55 78889999999999999754
No 371
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.74 E-value=5.8e-19 Score=211.09 Aligned_cols=118 Identities=27% Similarity=0.324 Sum_probs=74.4
Q ss_pred CcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEee
Q 047790 373 LSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLL 452 (885)
Q Consensus 373 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l 452 (885)
.+..|..+..|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|..+++|++|+|++|+|+
T Consensus 216 ~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~---------- 283 (727)
T 4b8c_D 216 PKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT---------- 283 (727)
T ss_dssp ------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS----------
T ss_pred ChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC----------
Confidence 3445556666666666666665 45555556667777777777766 56666666777777777666664
Q ss_pred cCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccc
Q 047790 453 NNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIP 510 (885)
Q Consensus 453 ~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p 510 (885)
.+|..|..+++|++|+|++|.|+ .+|..|+.+.+|+.|+|++|+|+|.+|
T Consensus 284 -------~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p 333 (727)
T 4b8c_D 284 -------SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFL 333 (727)
T ss_dssp -------SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHH
T ss_pred -------ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCCh
Confidence 55666666777777777777665 566667777777777777777666554
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.74 E-value=1.6e-18 Score=181.26 Aligned_cols=124 Identities=23% Similarity=0.338 Sum_probs=72.0
Q ss_pred CCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEE
Q 047790 87 LSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLD 166 (885)
Q Consensus 87 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 166 (885)
+.+++.+++++|.+++.. .+..+++|++|++++|+++ .+| .++.+++|++|+|++|++++..| +..+++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 445556666666665432 4566666666666666666 344 46666666666666666664333 66666666666
Q ss_pred ccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCc
Q 047790 167 FSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLS 222 (885)
Q Consensus 167 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~ 222 (885)
|++|++++ +|. +.. ++|++|+|++|+++ .++. +..+++|++|++++|+++
T Consensus 92 L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~-~~~~--l~~l~~L~~L~Ls~N~i~ 141 (263)
T 1xeu_A 92 VNRNRLKN-LNG-IPS-ACLSRLFLDNNELR-DTDS--LIHLKNLEILSIRNNKLK 141 (263)
T ss_dssp CCSSCCSC-CTT-CCC-SSCCEEECCSSCCS-BSGG--GTTCTTCCEEECTTSCCC
T ss_pred CCCCccCC-cCc-ccc-CcccEEEccCCccC-CChh--hcCcccccEEECCCCcCC
Confidence 66666663 232 222 56666666666665 3331 555555555555555554
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=4.6e-18 Score=169.70 Aligned_cols=131 Identities=20% Similarity=0.301 Sum_probs=77.1
Q ss_pred cCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCce
Q 047790 85 FNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKS 164 (885)
Q Consensus 85 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 164 (885)
..+++|++|++++|.++ .+| .+..+++|++|++++|.++ .++.+..+++|++|++++|.+++..|..++.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 34555666666666665 333 4666666666666666554 2235556666666666666666555566666666666
Q ss_pred EEccCCcCCccCCcccCCCCCCccccccccc-cCCCCCcccccccccccEEEeecccCc
Q 047790 165 LDFSGNGLNGTIPSRLGDLTQLQDLDLSDNL-LSGSLPVSLLKNLQSLSYLDVSNNLLS 222 (885)
Q Consensus 165 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~~l~~L~~L~Ls~N~l~ 222 (885)
|++++|++++..|..+..+++|++|++++|. ++ .+| .+..+++|++|++++|+++
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~--~l~~l~~L~~L~l~~n~i~ 172 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM--PLKTLPELKSLNIQFDGVH 172 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG--GGGGCSSCCEEECTTBCCC
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH--hhcCCCCCCEEECCCCCCc
Confidence 6666666665555556666666666666665 43 444 2555566666666666554
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=5.3e-18 Score=168.32 Aligned_cols=179 Identities=22% Similarity=0.245 Sum_probs=101.4
Q ss_pred cceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCch-hcccCCCCCEEeccCccccCCCC
Q 047790 408 QILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPG-SLSRLTNLTTLNLFGNLLTGSIP 486 (885)
Q Consensus 408 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~-~l~~l~~L~~L~Ls~N~l~~~~p 486 (885)
+.+++++|.++ .+|..+.. +|++|++++|+|++ ..+. .+..+++|++|+|++|++++..|
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~----------------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 71 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGR----------------ISSDGLFGRLPHLVKLELKRNQLTGIEP 71 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCS----------------BCCSCSGGGCTTCCEEECCSSCCCCBCT
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCc----------------cCCccccccCCCCCEEECCCCCCCCcCH
Confidence 56777777774 77765543 77777777666641 2222 36677777777777777776667
Q ss_pred CCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhc
Q 047790 487 PEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPEL 566 (885)
Q Consensus 487 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~ 566 (885)
..|.++++|+.|+|++|++++.. |..|..+++|+.|+|++|+ +++.+|..+
T Consensus 72 ~~~~~l~~L~~L~Ls~N~l~~~~----------------~~~~~~l~~L~~L~L~~N~-------------l~~~~~~~~ 122 (192)
T 1w8a_A 72 NAFEGASHIQELQLGENKIKEIS----------------NKMFLGLHQLKTLNLYDNQ-------------ISCVMPGSF 122 (192)
T ss_dssp TTTTTCTTCCEEECCSCCCCEEC----------------SSSSTTCTTCCEEECCSSC-------------CCEECTTSS
T ss_pred hHcCCcccCCEEECCCCcCCccC----------------HHHhcCCCCCCEEECCCCc-------------CCeeCHHHh
Confidence 77777777777777777776543 4556666777777776333 334456666
Q ss_pred cCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCCccccccccccccCCccccccccCC
Q 047790 567 GNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNKDLCEKIMGS 637 (885)
Q Consensus 567 ~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~~~~~ 637 (885)
+.+++|++|+|++|++++..+... -...++...+..+...+..|. .++.....++..+...|..+...
T Consensus 123 ~~l~~L~~L~L~~N~l~c~c~l~~-~~~~l~~~~~~~~~~~C~~P~--~l~~~~l~~l~~~~~~C~~~~~~ 190 (192)
T 1w8a_A 123 EHLNSLTSLNLASNPFNCNCHLAW-FAEWLRKKSLNGGAARCGAPS--KVRDVQIKDLPHSEFKCSSENSE 190 (192)
T ss_dssp TTCTTCCEEECTTCCBCCSGGGHH-HHHHHHHHCCSGGGCBBCSST--TTTTSBGGGSCTTTCCCCCC---
T ss_pred hcCCCCCEEEeCCCCccCcCcchH-HHHHHHHcCCCCCCCCCCCCh--HHcCCChhhCcHhhcCcCCCCCC
Confidence 667777777777777765543211 111223333334433332232 22333444555555566544433
No 375
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.72 E-value=1.5e-18 Score=188.30 Aligned_cols=291 Identities=11% Similarity=0.094 Sum_probs=147.6
Q ss_pred ccccccccC--CCCCCEEecCCCcccCcCCcCccC-cCCCCEEeccCCcCC--CCCCccccccccccEeeeeccCCCCCC
Q 047790 78 GPVSPFLFN--LSSLRILDLSKNLLFGQLSPQVSN-LKRLKMLSVGENQLS--GSIPSQLGLLTRLETISLRSNSFTGEM 152 (885)
Q Consensus 78 g~~~~~l~~--l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 152 (885)
|.++..+.. +.+++.|+++++- ...-...+.. +++|+.|||++|+|. ...+. .++.++.+.+..|.| .
T Consensus 13 g~l~~~l~~~~~~~l~~L~l~g~i-~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~I---~ 85 (329)
T 3sb4_A 13 GTLISMMTEEEANSITHLTLTGKL-NAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANFV---P 85 (329)
T ss_dssp TCGGGGSCHHHHHHCSEEEEEEEE-CHHHHHHHHHSCTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTEE---C
T ss_pred CcHHhhccchhhCceeEEEEeccc-cHHHHHHHHHhhccCeEEecCcceeEEecCccc---ccccccccccccccc---C
Confidence 344443333 5567777776541 1111112222 566777777777766 21111 222244444444422 2
Q ss_pred CccccC--------CccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccC---
Q 047790 153 PSELGD--------IKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLL--- 221 (885)
Q Consensus 153 p~~l~~--------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l--- 221 (885)
+.+|.+ +++|+.|+|.+ .++.+.+.+|.++++|+.|++++|.++ .++..+|.++.++.++.+..+..
T Consensus 86 ~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~-~i~~~aF~~~~~l~~l~~~~~~~~~~ 163 (329)
T 3sb4_A 86 AYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAP-NLLPEALADSVTAIFIPLGSSDAYRF 163 (329)
T ss_dssp TTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCC-EECTTSSCTTTCEEEECTTCTHHHHT
T ss_pred HHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCcc-ccchhhhcCCCceEEecCcchhhhhc
Confidence 234445 67777777766 666555566777777777777777666 66666666666565555444211
Q ss_pred -cccCCccccCCCccc-ceecccccccccccccccCccc----cCCCCCcEEEecCCcccccccccc-cCCCCCcEEEcc
Q 047790 222 -SGNIPPEIGNLKKLS-DLYLGIGPYQLSLFVGRITPEI----GNCSMLKYISLSNNKLSGPIPREL-CNSGSLVEINLD 294 (885)
Q Consensus 222 -~~~~p~~~~~l~~L~-~L~l~~n~~~~~~~~~~~~~~l----~~l~~L~~L~Ls~N~l~~~~p~~l-~~l~~L~~L~L~ 294 (885)
.......|.++..|+ .+.+.. .+.++..+ -...+++.+.+.++-.. .....+ ..+++|+.++|+
T Consensus 164 ~~~i~~~~f~~~~~L~~~i~~~~--------~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~ 234 (329)
T 3sb4_A 164 KNRWEHFAFIEGEPLETTIQVGA--------MGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDIS 234 (329)
T ss_dssp STTTTTSCEEESCCCEEEEEECT--------TCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECT
T ss_pred cccccccccccccccceeEEecC--------CCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECC
Confidence 111122333333333 122210 01111110 11233444444433211 111111 124455555555
Q ss_pred CCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCccccCccccc-eeecccccccCCC
Q 047790 295 GNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLM-EFNAASNLLEGSL 373 (885)
Q Consensus 295 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~ 373 (885)
+|+++.+++.+|.++++|+.++|.+| ++.+.+.+|.++.+|+ .+++.+ .+..+.
T Consensus 235 ~n~i~~I~~~aF~~~~~L~~l~l~~n------------------------i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~ 289 (329)
T 3sb4_A 235 KTNATTIPDFTFAQKKYLLKIKLPHN------------------------LKTIGQRVFSNCGRLAGTLELPA-SVTAIE 289 (329)
T ss_dssp TBCCCEECTTTTTTCTTCCEEECCTT------------------------CCEECTTTTTTCTTCCEEEEECT-TCCEEC
T ss_pred CCCcceecHhhhhCCCCCCEEECCcc------------------------cceehHHHhhCChhccEEEEEcc-cceEEc
Confidence 55555555555555555555555444 3334455566666666 666665 555556
Q ss_pred cccccccccccEEEccCCcccccCccccccccccccee
Q 047790 374 SWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILK 411 (885)
Q Consensus 374 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 411 (885)
+.+|.++++|+.+++++|+++.+.+.+|.++++|+.++
T Consensus 290 ~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 290 FGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp TTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred hhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 66777777777777777777777777777777777765
No 376
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.71 E-value=3.2e-18 Score=185.72 Aligned_cols=291 Identities=12% Similarity=0.076 Sum_probs=194.8
Q ss_pred CcCCCCEEeccCCcCCCCCCccccc-cccccEeeeeccCCC--CCCCccccCCccCceEEccCCcCCccCCcccCC----
Q 047790 110 NLKRLKMLSVGENQLSGSIPSQLGL-LTRLETISLRSNSFT--GEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGD---- 182 (885)
Q Consensus 110 ~l~~L~~L~L~~n~l~~~~p~~~~~-l~~L~~L~Ls~N~l~--~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~---- 182 (885)
.+.+++.|.++++ +...--..+.. +++|++|||++|++. ...+. .++.++.+.+..|. +.+.+|.+
T Consensus 23 ~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~---I~~~aF~~~~~~ 95 (329)
T 3sb4_A 23 EANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANF---VPAYAFSNVVNG 95 (329)
T ss_dssp HHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTE---ECTTTTEEEETT
T ss_pred hhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccc---cccccccccccccc---cCHHHhcccccc
Confidence 3778999999875 22111123333 778999999999998 22222 23335666666664 33456777
Q ss_pred ----CCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceeccccccccccccccc-Ccc
Q 047790 183 ----LTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRI-TPE 257 (885)
Q Consensus 183 ----l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~-~~~ 257 (885)
+++|+.|+|.+ .++ .|+..+|.++++|+.|++++|.++...+..|.++.++..+..+.+..... ...+ ...
T Consensus 96 ~~~g~~~L~~l~L~~-~i~-~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~--~~~i~~~~ 171 (329)
T 3sb4_A 96 VTKGKQTLEKVILSE-KIK-NIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRF--KNRWEHFA 171 (329)
T ss_dssp EEEECTTCCC-CBCT-TCC-EECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHT--STTTTTSC
T ss_pred cccccCCCcEEECCc-ccc-chhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhc--cccccccc
Confidence 99999999999 887 89999999999999999999999877777888777666665532111000 0001 112
Q ss_pred ccCCCCCc-EEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccC-CCCc
Q 047790 258 IGNCSMLK-YISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYIS-ELPL 335 (885)
Q Consensus 258 l~~l~~L~-~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~~L 335 (885)
+.++..|+ .+.+.... .++..+. ...-...++..+.+.++-.......... ...|
T Consensus 172 f~~~~~L~~~i~~~~~~---~l~~~~~--------------------~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L 228 (329)
T 3sb4_A 172 FIEGEPLETTIQVGAMG---KLEDEIM--------------------KAGLQPRDINFLTIEGKLDNADFKLIRDYMPNL 228 (329)
T ss_dssp EEESCCCEEEEEECTTC---CHHHHHH--------------------HTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTC
T ss_pred cccccccceeEEecCCC---cHHHHHh--------------------hcccCccccceEEEeeeecHHHHHHHHHhcCCC
Confidence 33444444 33333211 1111110 0000123333333333211000000000 1256
Q ss_pred eeEEeecCccccccCccccCccccceeecccccccCCCccccccccccc-EEEccCCcccccCcccccccccccceeccc
Q 047790 336 KVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALE-KLDLSSNMLTRQIPKKIGNLTNIQILKLNS 414 (885)
Q Consensus 336 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 414 (885)
+.+++++|+++...+..|.++.+|+.+++.+| +..+.+.+|.++.+|+ .+++.+ .++.+.+.+|.++++|+.++++.
T Consensus 229 ~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~ 306 (329)
T 3sb4_A 229 VSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATG 306 (329)
T ss_dssp CEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECS
T ss_pred eEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCC
Confidence 77777777777777788999999999999998 8888899999999999 999999 88888889999999999999999
Q ss_pred ccccCcCCCccCCCCcccEEEc
Q 047790 415 NFFDGIIPMEFGDCISLNTLDL 436 (885)
Q Consensus 415 N~l~~~~p~~~~~l~~L~~L~L 436 (885)
|+++.+.+..|.++++|+.++.
T Consensus 307 n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 307 DKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp SCCCEECTTTTCTTCCCCEEEC
T ss_pred CccCccchhhhcCCcchhhhcc
Confidence 9999888899999999999874
No 377
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=2.9e-17 Score=162.98 Aligned_cols=128 Identities=29% Similarity=0.365 Sum_probs=90.8
Q ss_pred cEEEccCCcccccCcccccccccccceecccccccCcCCC-ccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCc
Q 047790 384 EKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPM-EFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIP 462 (885)
Q Consensus 384 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p 462 (885)
+.+++++|+++ .+|..+.. +|+.|+|++|+|+++.+. .|..+++|++|+|++|+|+ +..|
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~----------------~~~~ 71 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT----------------GIEP 71 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCC----------------CBCT
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCC----------------CcCH
Confidence 67777777775 45554433 777777777777766554 4777777777777777764 3456
Q ss_pred hhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccC
Q 047790 463 GSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSC 542 (885)
Q Consensus 463 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~ 542 (885)
..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|++++.+ |..|..+++|+.|+|++
T Consensus 72 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~----------------~~~~~~l~~L~~L~L~~ 135 (192)
T 1w8a_A 72 NAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVM----------------PGSFEHLNSLTSLNLAS 135 (192)
T ss_dssp TTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEEC----------------TTSSTTCTTCCEEECTT
T ss_pred hHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeC----------------HHHhhcCCCCCEEEeCC
Confidence 77777777777777777777777777777777777777777777654 56677777777777775
Q ss_pred CCCC
Q 047790 543 NELD 546 (885)
Q Consensus 543 N~l~ 546 (885)
|+++
T Consensus 136 N~l~ 139 (192)
T 1w8a_A 136 NPFN 139 (192)
T ss_dssp CCBC
T ss_pred CCcc
Confidence 5543
No 378
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.69 E-value=6.4e-17 Score=156.94 Aligned_cols=134 Identities=26% Similarity=0.301 Sum_probs=115.6
Q ss_pred CCCCCCEEecCCCccc-CcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCce
Q 047790 86 NLSSLRILDLSKNLLF-GQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKS 164 (885)
Q Consensus 86 ~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 164 (885)
..++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3478999999999998 78888889999999999999999865 78889999999999999999778888888999999
Q ss_pred EEccCCcCCccC-CcccCCCCCCccccccccccCCCCCc---ccccccccccEEEeecccCc
Q 047790 165 LDFSGNGLNGTI-PSRLGDLTQLQDLDLSDNLLSGSLPV---SLLKNLQSLSYLDVSNNLLS 222 (885)
Q Consensus 165 L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~~~l~~L~~L~Ls~N~l~ 222 (885)
|+|++|++++.. +..+..+++|++|++++|.++ .+|. ..+..+++|++|++++|.+.
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~-~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVT-NLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGG-TSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCc-chHHHHHHHHHhCccCcEecCCCCChh
Confidence 999999998542 267889999999999999998 5665 46888999999999999886
No 379
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.68 E-value=7.5e-17 Score=168.05 Aligned_cols=138 Identities=22% Similarity=0.224 Sum_probs=107.6
Q ss_pred EEeecceecccCCceEEEEEe-CCCCe--EEEEEecccccc------------------------cHHHHHHHHHHhccc
Q 047790 662 IIVFENVIGGGGFRTAFKGTM-PDQKT--VAVKKLSQATGQ------------------------CDREFAAEMETLDMV 714 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~-~~~~~--valK~~~~~~~~------------------------~~~~~~~E~~~l~~l 714 (885)
.|++.+.||+|+||.||+|.+ .+|+. ||+|+++..... ....+.+|+++++.+
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 478899999999999999988 67888 999987543111 013678899999999
Q ss_pred CCCCc--cceeeeeEeCCeeEEEEecccC-C----CHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCC
Q 047790 715 KHQNL--VQLLGYCSVGEEKLLVYEYMVN-G----SLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDI 787 (885)
Q Consensus 715 ~~~~i--~~~~~~~~~~~~~~lv~e~~~~-~----sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dl 787 (885)
.|+++ +.++++ ...++||||+.+ | +|.++... .++..+..++.|++.++++||. +.||+||||
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~--~~givHrDl 197 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ--EAELVHADL 197 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH--TSCEECSSC
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH--HCCEEeCCC
Confidence 88764 333332 356899999942 3 77776542 2234577899999999999994 579999999
Q ss_pred CCCcEEEcCCCcEEEeeccCcccc
Q 047790 788 KTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 788 kp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
||+||++++ .++|+|||.|...
T Consensus 198 kp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 198 SEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp STTSEEESS--SEEECCCTTCEET
T ss_pred CHHHEEEcC--cEEEEECcccccC
Confidence 999999998 8999999999764
No 380
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.67 E-value=2.4e-16 Score=154.23 Aligned_cols=135 Identities=24% Similarity=0.273 Sum_probs=80.5
Q ss_pred CCcccCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCcc
Q 047790 52 RHCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQ 131 (885)
Q Consensus 52 ~~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~ 131 (885)
..|+|.++.|+..+++ .+|..+ .++|++|+|++|.+++..+..|+.+++|++|+|++|++++..+..
T Consensus 5 C~C~~~~l~~~~~~l~-----------~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 71 (177)
T 2o6r_A 5 CSCSGTEIRCNSKGLT-----------SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGV 71 (177)
T ss_dssp CEEETTEEECCSSCCS-----------SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTT
T ss_pred CEeCCCEEEecCCCCc-----------cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhH
Confidence 3477888888654322 233322 256677777777766555555666666666666666666554555
Q ss_pred ccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCC
Q 047790 132 LGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGS 199 (885)
Q Consensus 132 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 199 (885)
|+.+++|++|+|++|++++..+..+..+++|++|++++|++++..+..|..+++|++|+|++|.+++.
T Consensus 72 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 72 FDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred ccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 56666666666666666655555556666666666666666644444455566666666666665543
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.65 E-value=4.5e-16 Score=154.34 Aligned_cols=126 Identities=25% Similarity=0.326 Sum_probs=85.7
Q ss_pred EEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCc
Q 047790 92 ILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNG 171 (885)
Q Consensus 92 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 171 (885)
++++++|.++ .+|..+. ++|++|+|++|+|+ .+|..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4555555554 3444432 46677777777776 566667777777777777777776666667777777777777777
Q ss_pred CCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCc
Q 047790 172 LNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLS 222 (885)
Q Consensus 172 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~ 222 (885)
|++..|.+|.++++|++|+|++|+++ .+|...|..+++|++|++++|.+.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCC-BCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCC-eeChhhhhcCccccEEEeCCCCee
Confidence 77666666777777777777777776 666666777777777777777765
No 382
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=7.5e-17 Score=152.97 Aligned_cols=129 Identities=26% Similarity=0.341 Sum_probs=102.7
Q ss_pred CCCCCEEecCCCccc-CcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceE
Q 047790 87 LSSLRILDLSKNLLF-GQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSL 165 (885)
Q Consensus 87 l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 165 (885)
.++|++|++++|.++ +.+|..++.+++|++|++++|.+++. ..++.+++|++|+|++|.+++.+|..++.+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 467888888888887 67888888888888888888888865 678888888888888888887677777778888888
Q ss_pred EccCCcCCcc-CCcccCCCCCCccccccccccCCCCCc---ccccccccccEEEeec
Q 047790 166 DFSGNGLNGT-IPSRLGDLTQLQDLDLSDNLLSGSLPV---SLLKNLQSLSYLDVSN 218 (885)
Q Consensus 166 ~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~~~l~~L~~L~Ls~ 218 (885)
++++|++++. .+..+..+++|++|++++|.++ .+|. ..+..+++|++|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVT-NLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGG-GSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCccc-chHHHHHHHHHHCCCcccccCCC
Confidence 8888888853 3467788888888888888887 4554 4577788888887753
No 383
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.65 E-value=3.6e-16 Score=155.03 Aligned_cols=135 Identities=28% Similarity=0.317 Sum_probs=88.3
Q ss_pred CEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceee
Q 047790 472 TTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGL 551 (885)
Q Consensus 472 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l 551 (885)
+.+++++|.++ .+|..+. .+|+.|++++|+++ .+|..|..+++|+.|+|++|+++
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-----------------~ip~~~~~l~~L~~L~Ls~N~i~----- 67 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-----------------LVPKELSNYKHLTLIDLSNNRIS----- 67 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-----------------SCCGGGGGCTTCCEEECCSSCCC-----
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-----------------hhHHHhhcccCCCEEECCCCcCC-----
Confidence 45666666666 4555443 35666777776665 33566667777777777754443
Q ss_pred eecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCC-CccccccccccccCCccc
Q 047790 552 YVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPR-SGICQNLSIISLTGNKDL 630 (885)
Q Consensus 552 ~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~~N~~~ 630 (885)
+..|..|.++++|++|+|++|+|++..|..+..+++|++|+|++|+|++.++. ...+.+++.+++.+|||.
T Consensus 68 --------~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 68 --------TLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp --------CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred --------EeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 23345566777777777777777766666677777777777777777765543 345566777778888888
Q ss_pred cccccCCcccccccc
Q 047790 631 CEKIMGSDCQILTFG 645 (885)
Q Consensus 631 c~~~~~~~c~~~~~~ 645 (885)
| +|...|+.
T Consensus 140 C------~c~l~~l~ 148 (193)
T 2wfh_A 140 C------DCNMQWLS 148 (193)
T ss_dssp C------SGGGHHHH
T ss_pred c------CCcCHHHH
Confidence 8 78777654
No 384
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=2.5e-16 Score=152.75 Aligned_cols=137 Identities=25% Similarity=0.263 Sum_probs=123.8
Q ss_pred CcEEEEEEeccccc-ccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEee
Q 047790 64 SRVVSLVIQTQSLK-GPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETIS 142 (885)
Q Consensus 64 ~~v~~l~l~~~~l~-g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 142 (885)
.+++.|+++++.++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 46899999999998 88999999999999999999999876 8899999999999999999988898888899999999
Q ss_pred eeccCCCCCC-CccccCCccCceEEccCCcCCccCC---cccCCCCCCccccccccccCCCCCcc
Q 047790 143 LRSNSFTGEM-PSELGDIKQLKSLDFSGNGLNGTIP---SRLGDLTQLQDLDLSDNLLSGSLPVS 203 (885)
Q Consensus 143 Ls~N~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~p~~ 203 (885)
|++|.+++.. +..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+. ++|..
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~~ 165 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPDS 165 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCSS
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hcccc
Confidence 9999999642 2789999999999999999996555 48999999999999999998 77754
No 385
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=1.4e-15 Score=148.70 Aligned_cols=132 Identities=21% Similarity=0.234 Sum_probs=115.4
Q ss_pred CCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccC
Q 047790 90 LRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSG 169 (885)
Q Consensus 90 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 169 (885)
.+.+++++|.++. +|..+. ++|++|++++|++++..+..|+.+++|++|++++|++++..+..|+.+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~~-~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSS-CCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCcc-CCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 3678899998864 554443 7899999999999977777889999999999999999977777889999999999999
Q ss_pred CcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccC
Q 047790 170 NGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNI 225 (885)
Q Consensus 170 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~ 225 (885)
|++++..+..|..+++|++|++++|+++ .+|...+..+++|++|++++|++++..
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcce-EeCHHHhcCCcccCEEEecCCCeeccC
Confidence 9999877778899999999999999998 788887899999999999999998644
No 386
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=5.4e-16 Score=147.02 Aligned_cols=127 Identities=24% Similarity=0.276 Sum_probs=106.2
Q ss_pred cCCCCEEeccCCcCC-CCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccc
Q 047790 111 LKRLKMLSVGENQLS-GSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDL 189 (885)
Q Consensus 111 l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 189 (885)
.++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|+|++|++++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 478999999999998 78898889999999999999999865 788899999999999999997788888889999999
Q ss_pred cccccccCCCCC-cccccccccccEEEeecccCcccCC---ccccCCCcccceec
Q 047790 190 DLSDNLLSGSLP-VSLLKNLQSLSYLDVSNNLLSGNIP---PEIGNLKKLSDLYL 240 (885)
Q Consensus 190 ~Ls~N~l~~~~p-~~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~l 240 (885)
++++|+++ .+| ...+..+++|++|++++|++++..+ ..+..+++|+.|++
T Consensus 94 ~ls~N~i~-~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l 147 (149)
T 2je0_A 94 NLSGNKIK-DLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDG 147 (149)
T ss_dssp ECTTSCCC-SHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETT
T ss_pred ECCCCcCC-ChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccC
Confidence 99999998 444 2448889999999999999986544 35666666666554
No 387
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.58 E-value=2.6e-14 Score=158.23 Aligned_cols=87 Identities=11% Similarity=0.113 Sum_probs=39.8
Q ss_pred CccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCC
Q 047790 350 PVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCI 429 (885)
Q Consensus 350 p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 429 (885)
+..|.++++|+.+.+. +.+..+...+|.++++|+.++|.+| ++.+.+.+|.++ +|+.+++++|.+....+..|.+++
T Consensus 293 ~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~ 369 (401)
T 4fdw_A 293 PYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFP 369 (401)
T ss_dssp TTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSC
T ss_pred HHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCC
Confidence 3444444455555544 2244444444555555555555333 433444445544 455555555544444444444442
Q ss_pred -cccEEEcCCc
Q 047790 430 -SLNTLDLGSN 439 (885)
Q Consensus 430 -~L~~L~Ls~N 439 (885)
+++.|++-.+
T Consensus 370 ~~l~~l~vp~~ 380 (401)
T 4fdw_A 370 DDITVIRVPAE 380 (401)
T ss_dssp TTCCEEEECGG
T ss_pred CCccEEEeCHH
Confidence 3444444443
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.58 E-value=3.4e-17 Score=163.55 Aligned_cols=156 Identities=25% Similarity=0.281 Sum_probs=104.6
Q ss_pred ccccccccceecccccccCcCCC------ccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEE
Q 047790 401 IGNLTNIQILKLNSNFFDGIIPM------EFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTL 474 (885)
Q Consensus 401 ~~~l~~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L 474 (885)
+.....++.++++.|.+++..|. .+..+++|++|++++|+++ .+| .+..+++|+.|
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~-----------------~l~-~~~~l~~L~~L 75 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIE-----------------KIS-SLSGMENLRIL 75 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEES-----------------CCC-CHHHHTTCCEE
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCc-----------------ccc-ccccCCCCCEE
Confidence 44456677777777777776665 6677777777777777664 345 66677777777
Q ss_pred eccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeec
Q 047790 475 NLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQ 554 (885)
Q Consensus 475 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~ 554 (885)
++++|+++ .+|..+..+++|+.|++++|++++ + | .+..+++|+.|+|++|+++.+.
T Consensus 76 ~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l----------------~-~~~~l~~L~~L~l~~N~i~~~~----- 131 (198)
T 1ds9_A 76 SLGRNLIK-KIENLDAVADTLEELWISYNQIAS-L----------------S-GIEKLVNLRVLYMSNNKITNWG----- 131 (198)
T ss_dssp EEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-H----------------H-HHHHHHHSSEEEESEEECCCHH-----
T ss_pred ECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-C----------------C-ccccCCCCCEEECCCCcCCchh-----
Confidence 77777777 566666666777777777777763 1 3 4667777777777766554221
Q ss_pred ccccccccchhccCcccccccccccccCCCCCCcc----------ccCccccceeecccCcCC
Q 047790 555 SNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEK----------LCSLPYLLYLNLADNRLE 607 (885)
Q Consensus 555 ~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~----------l~~l~~L~~L~l~~N~l~ 607 (885)
.+..+..+++|++|++++|++++.+|.. +..+++|++|| +|+++
T Consensus 132 -------~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 132 -------EIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp -------HHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred -------HHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 0135677777777777777777665543 66677777776 56654
No 389
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=2.1e-15 Score=147.33 Aligned_cols=134 Identities=18% Similarity=0.181 Sum_probs=96.1
Q ss_pred cccCCCCCCEEecCCCcccCcCCcCccCcC-CCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCcc
Q 047790 83 FLFNLSSLRILDLSKNLLFGQLSPQVSNLK-RLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQ 161 (885)
Q Consensus 83 ~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 161 (885)
.+.+.++|++|+|++|.++. +| .+..+. +|++|+|++|+|++. ..|+.+++|++|+|++|.+++..|..++.+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~-~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IE-NLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CC-CGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hH-HhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 45667788888888888774 33 355554 788888888888754 56777888888888888887544445577788
Q ss_pred CceEEccCCcCCccCCc--ccCCCCCCccccccccccCCCCCcc---cccccccccEEEeecccCc
Q 047790 162 LKSLDFSGNGLNGTIPS--RLGDLTQLQDLDLSDNLLSGSLPVS---LLKNLQSLSYLDVSNNLLS 222 (885)
Q Consensus 162 L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~---~~~~l~~L~~L~Ls~N~l~ 222 (885)
|++|+|++|+|+ .+|. .+..+++|++|++++|.++ .+|.. .+..+++|++||+++|.+.
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 888888888876 4454 6777777888888888776 56654 4667777777777777664
No 390
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.56 E-value=5.3e-15 Score=159.47 Aligned_cols=138 Identities=12% Similarity=0.025 Sum_probs=101.2
Q ss_pred EEeecceecccCCceEEEEEeCCCCeEEEEEecccccc--------------cHH--------HHHHHHHHhcccCCCCc
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQ--------------CDR--------EFAAEMETLDMVKHQNL 719 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~--------------~~~--------~~~~E~~~l~~l~~~~i 719 (885)
.|.+.++||+|++|.||+|...+|+.||+|+++..... ... ....|.+.+.++.+..+
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 38999999999999999999999999999987532100 001 12356777777755544
Q ss_pred cceeeeeEeCCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC-
Q 047790 720 VQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF- 798 (885)
Q Consensus 720 ~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~- 798 (885)
....-+.. ...++||||++|+++.++.. . .....++.|++.++.++| +.|||||||||.||++++++
T Consensus 176 ~vp~p~~~--~~~~LVME~i~G~~L~~l~~-----~--~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 176 PVPEPIAQ--SRHTIVMSLVDALPMRQVSS-----V--PDPASLYADLIALILRLA---KHGLIHGDFNEFNILIREEKD 243 (397)
T ss_dssp SCCCEEEE--ETTEEEEECCSCEEGGGCCC-----C--SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEEEEC
T ss_pred CCCeeeec--cCceEEEEecCCccHhhhcc-----c--HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeCCCC
Confidence 32222222 22479999999888755332 1 134568899999999999 89999999999999998766
Q ss_pred ---------cEEEeeccCcccc
Q 047790 799 ---------EAKVSDFGLARLI 811 (885)
Q Consensus 799 ---------~vkl~Dfg~a~~~ 811 (885)
.+.|+||+-+...
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCEET
T ss_pred cccccccccceEEEEeCCcccC
Confidence 3899999987554
No 391
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.55 E-value=8.6e-14 Score=154.04 Aligned_cols=265 Identities=12% Similarity=0.128 Sum_probs=121.4
Q ss_pred CCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEc
Q 047790 88 SSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDF 167 (885)
Q Consensus 88 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 167 (885)
..++.+.+..+ ++.....+|.++ +|+.+.+..+ ++..-..+|.+ .+|+.+++.. .++...+.+|.++++|+.+++
T Consensus 113 ~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECCc-cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 34444444332 222333344443 4555554443 33233334443 2344444443 333333344444444555555
Q ss_pred cCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccc
Q 047790 168 SGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQL 247 (885)
Q Consensus 168 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~ 247 (885)
++|+++.....+|. .++|+.+.|..+ ++ .++..+|.++++|+.+++.+| ++......
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~-~I~~~aF~~~~~L~~l~l~~~-l~~I~~~a------------------- 244 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-LK-EIGSQAFLKTSQLKTIEIPEN-VSTIGQEA------------------- 244 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-CC-EECTTTTTTCTTCCCEECCTT-CCEECTTT-------------------
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-hh-eehhhHhhCCCCCCEEecCCC-ccCccccc-------------------
Confidence 44444433333333 244444444422 33 444444444444444444432 22111111
Q ss_pred cccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCc-----CcccccccccCCcceeecccccc
Q 047790 248 SLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLS-----GTIEDVFDRCTNLSELVLVNNRI 322 (885)
Q Consensus 248 ~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l 322 (885)
|.+ .+|+.+.+. +.++...+..|.++.+|+.+++.+|.+. .+.+.+|.++++|+.+.+.+ .+
T Consensus 245 ----------F~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i 311 (401)
T 4fdw_A 245 ----------FRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SI 311 (401)
T ss_dssp ----------TTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TC
T ss_pred ----------ccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ce
Confidence 222 345555552 3344344455555555555555555443 34455555565555555552 23
Q ss_pred CCCCCcccCCCCceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCccccc
Q 047790 323 SGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIG 402 (885)
Q Consensus 323 ~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 402 (885)
+. ....+|.++.+|+.+.+..| +..+...+|.++ +|+.+++++|.+....+..|.
T Consensus 312 ~~-----------------------I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~ 366 (401)
T 4fdw_A 312 RI-----------------------LGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWY 366 (401)
T ss_dssp CE-----------------------ECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCC
T ss_pred EE-----------------------EhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCccccccccc
Confidence 32 33344444455555555332 344444555555 566666666665555555555
Q ss_pred ccc-cccceeccccccc
Q 047790 403 NLT-NIQILKLNSNFFD 418 (885)
Q Consensus 403 ~l~-~L~~L~Ls~N~l~ 418 (885)
+++ +++.|++..+.+.
T Consensus 367 ~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 367 GFPDDITVIRVPAESVE 383 (401)
T ss_dssp CSCTTCCEEEECGGGHH
T ss_pred CCCCCccEEEeCHHHHH
Confidence 553 5566666555543
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=5.5e-15 Score=144.37 Aligned_cols=134 Identities=19% Similarity=0.237 Sum_probs=99.0
Q ss_pred ccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccC-CCCCEEeccCccccCCCCCCcccccccceeeecc
Q 047790 424 EFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRL-TNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGH 502 (885)
Q Consensus 424 ~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 502 (885)
.+.++.+|+.|++++|+++ .+|. +..+ ++|+.|++++|.+++. +.+..+++|+.|++++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-----------------~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~ 73 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-----------------VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNN 73 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-----------------SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCS
T ss_pred hcCCcCCceEEEeeCCCCc-----------------hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCC
Confidence 4556677777777777775 3333 3333 3788888888888754 5678888888888888
Q ss_pred ccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccch--hccCcccccccccccc
Q 047790 503 NQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPP--ELGNLVQLEYLDFSMN 580 (885)
Q Consensus 503 N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~--~~~~l~~L~~L~Ls~N 580 (885)
|++++.. |..|..+++|+.|+|++|+++ .+|. .++.+++|++|++++|
T Consensus 74 N~l~~~~----------------~~~~~~l~~L~~L~L~~N~i~--------------~~~~~~~l~~l~~L~~L~l~~N 123 (176)
T 1a9n_A 74 NRICRIG----------------EGLDQALPDLTELILTNNSLV--------------ELGDLDPLASLKSLTYLCILRN 123 (176)
T ss_dssp SCCCEEC----------------SCHHHHCTTCCEEECCSCCCC--------------CGGGGGGGGGCTTCCEEECCSS
T ss_pred CcccccC----------------cchhhcCCCCCEEECCCCcCC--------------cchhhHhhhcCCCCCEEEecCC
Confidence 8887432 344578888888888877665 4555 7788888999999999
Q ss_pred cCCCCCCcc----ccCccccceeecccCcCCC
Q 047790 581 MLDGHIPEK----LCSLPYLLYLNLADNRLEG 608 (885)
Q Consensus 581 ~l~~~ip~~----l~~l~~L~~L~l~~N~l~~ 608 (885)
+++ .+|.. +..+++|++||+++|.+..
T Consensus 124 ~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 124 PVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp GGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 887 56764 7888889999998887653
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.54 E-value=3.5e-17 Score=163.43 Aligned_cols=137 Identities=23% Similarity=0.262 Sum_probs=96.8
Q ss_pred ccCCCCCCEEecCCCcccCcCCc------CccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCcccc
Q 047790 84 LFNLSSLRILDLSKNLLFGQLSP------QVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELG 157 (885)
Q Consensus 84 l~~l~~L~~L~Ls~n~l~~~~~~------~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 157 (885)
+.....++.++++.+.+++.+|+ .++.+++|++|+|++|++++ +| .+..+++|++|++++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 34455666667777777766665 67777777777777777775 56 7777777777777777777 5666666
Q ss_pred CCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCc-ccccccccccEEEeecccCcccCC
Q 047790 158 DIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPV-SLLKNLQSLSYLDVSNNLLSGNIP 226 (885)
Q Consensus 158 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~~l~~L~~L~Ls~N~l~~~~p 226 (885)
.+++|++|+|++|++++ +| .+..+++|++|++++|+++ .+|. ..+..+++|++|++++|++++..|
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKIT-NWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECC-CHHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCC-chhHHHHHhcCCCCCEEEecCCccccccc
Confidence 77777777777777774 34 4677777777777777776 4443 346777778888888877765444
No 394
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.54 E-value=1.7e-13 Score=152.46 Aligned_cols=218 Identities=20% Similarity=0.190 Sum_probs=122.5
Q ss_pred cccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCce
Q 047790 257 EIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLK 336 (885)
Q Consensus 257 ~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~ 336 (885)
.|.++++|+.+.+.++..+ .....|.++.+|+.+++..| ++.+...+|..+..|+.+.+.++... .....+....|+
T Consensus 157 aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~-i~~~~~~~~~l~ 233 (394)
T 4fs7_A 157 AFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY-LGDFALSKTGVK 233 (394)
T ss_dssp TTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE-ECTTTTTTCCCC
T ss_pred hhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE-eehhhcccCCCc
Confidence 4667778888888765433 55567778888888888766 66667777888888888877766432 222233333566
Q ss_pred eEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceeccccc
Q 047790 337 VFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNF 416 (885)
Q Consensus 337 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 416 (885)
.+.+.. .++......|..+..++.+.+..+... .....|.....++.+....+.+ ....|..+.+|+.+.+..+
T Consensus 234 ~i~ip~-~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~- 307 (394)
T 4fs7_A 234 NIIIPD-SFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS- 307 (394)
T ss_dssp EEEECT-TCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-
T ss_pred eEEECC-CceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceee---ccccccccccccccccccc-
Confidence 666643 233344455566666666666554322 3344455555666655555433 2234555556666655443
Q ss_pred ccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccc
Q 047790 417 FDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQ 496 (885)
Q Consensus 417 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 496 (885)
++.+....|.++.+|+.+++.++ ++ ..-..+|.++++|+.+++..| ++..-..+|.++.+|+
T Consensus 308 i~~I~~~aF~~c~~L~~i~lp~~-v~----------------~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~ 369 (394)
T 4fs7_A 308 VKFIGEEAFESCTSLVSIDLPYL-VE----------------EIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLK 369 (394)
T ss_dssp CCEECTTTTTTCTTCCEECCCTT-CC----------------EECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCC
T ss_pred cceechhhhcCCCCCCEEEeCCc-cc----------------EEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCC
Confidence 44444455566666666655432 22 112344555555666655544 4433344555555555
Q ss_pred eeeec
Q 047790 497 GLYLG 501 (885)
Q Consensus 497 ~L~Ls 501 (885)
.+++.
T Consensus 370 ~i~lp 374 (394)
T 4fs7_A 370 KVELP 374 (394)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 55554
No 395
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.53 E-value=2.4e-13 Score=151.18 Aligned_cols=307 Identities=13% Similarity=0.105 Sum_probs=138.5
Q ss_pred ccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCc
Q 047790 84 LFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLK 163 (885)
Q Consensus 84 l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 163 (885)
+.++++|+.+.|..+ ++.....+|.++++|+.++|.++ ++..-...|.++++|+.+.+..+ ++.....+|.....++
T Consensus 67 F~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~ 143 (394)
T 4fs7_A 67 FQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKE 143 (394)
T ss_dssp TTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSE
T ss_pred hhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecccccc
Confidence 445566666666532 44444455666666666666543 33233345555666665555433 2223334444443322
Q ss_pred eEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccc
Q 047790 164 SLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIG 243 (885)
Q Consensus 164 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n 243 (885)
...... +......+|.++++|+.+.+.++. . .++...|.++.+|+.+++..| ++......+.++..|+.+.+
T Consensus 144 ~~~~~~--~~~i~~~aF~~c~~L~~i~l~~~~-~-~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~--- 215 (394)
T 4fs7_A 144 ITIPEG--VTVIGDEAFATCESLEYVSLPDSM-E-TLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEF--- 215 (394)
T ss_dssp EECCTT--CCEECTTTTTTCTTCCEEECCTTC-C-EECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCC---
T ss_pred cccCcc--ccccchhhhcccCCCcEEecCCcc-c-eeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeec---
Confidence 222221 121233455566666666665442 2 455555566666666655544 33233344444444444443
Q ss_pred cccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccC
Q 047790 244 PYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRIS 323 (885)
Q Consensus 244 ~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 323 (885)
..+... +........+|+.+.+..+ ++.+...+|..+..|+.+.+..+...
T Consensus 216 --------------------------~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~ 266 (394)
T 4fs7_A 216 --------------------------PNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR 266 (394)
T ss_dssp --------------------------CTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE
T ss_pred --------------------------CCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce
Confidence 333221 1122222334444444322 23333444555555555555444221
Q ss_pred CCCCcccCCC-CceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCccccc
Q 047790 324 GSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIG 402 (885)
Q Consensus 324 ~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 402 (885)
.....+... .++.+....+. .....|..+.+|+.+.+..+ +..+...+|.++.+|+.++|.++ ++.+...+|.
T Consensus 267 -i~~~~F~~~~~l~~~~~~~~~---i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~ 340 (394)
T 4fs7_A 267 -IGGSLFYNCSGLKKVIYGSVI---VPEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFR 340 (394)
T ss_dssp -ECSCTTTTCTTCCEEEECSSE---ECTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTT
T ss_pred -eeccccccccccceeccCcee---eccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhcc
Confidence 222222222 23333332221 11233444455555554433 33333444555555555555432 4444445555
Q ss_pred ccccccceecccccccCcCCCccCCCCcccEEEcC
Q 047790 403 NLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLG 437 (885)
Q Consensus 403 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 437 (885)
++++|+.+++..| ++.+-..+|.++.+|+.+++.
T Consensus 341 ~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 341 GCTSLSNINFPLS-LRKIGANAFQGCINLKKVELP 374 (394)
T ss_dssp TCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEE
T ss_pred CCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEEC
Confidence 5555555555444 444444455555555555554
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=1.6e-13 Score=132.88 Aligned_cols=104 Identities=21% Similarity=0.273 Sum_probs=60.3
Q ss_pred CEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCC
Q 047790 91 RILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGN 170 (885)
Q Consensus 91 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 170 (885)
+.+|+++|.++. +|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 345555555543 444332 55666666666666555556666666666666666666554555556666666666666
Q ss_pred cCCccCCcccCCCCCCccccccccccC
Q 047790 171 GLNGTIPSRLGDLTQLQDLDLSDNLLS 197 (885)
Q Consensus 171 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 197 (885)
+|++..+..|.++++|++|+|++|.++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 666544445556666666666666555
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=1.4e-13 Score=133.31 Aligned_cols=107 Identities=29% Similarity=0.368 Sum_probs=96.1
Q ss_pred CCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCcccccc
Q 047790 113 RLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLS 192 (885)
Q Consensus 113 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 192 (885)
..+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 3578999999999 5787664 889999999999998889999999999999999999998777788999999999999
Q ss_pred ccccCCCCCcccccccccccEEEeecccCcc
Q 047790 193 DNLLSGSLPVSLLKNLQSLSYLDVSNNLLSG 223 (885)
Q Consensus 193 ~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~ 223 (885)
+|+|+ .+|...|..+++|++|+|++|+++.
T Consensus 87 ~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 87 DNQLK-SIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SSCCC-CCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CCccC-EeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 99998 6777779999999999999999874
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=2.2e-13 Score=132.34 Aligned_cols=104 Identities=19% Similarity=0.273 Sum_probs=62.7
Q ss_pred CEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCC
Q 047790 91 RILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGN 170 (885)
Q Consensus 91 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 170 (885)
+.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|+.+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45777777763 4555443 56666666666666655666666666666666666666544444556666666666666
Q ss_pred cCCccCCcccCCCCCCccccccccccC
Q 047790 171 GLNGTIPSRLGDLTQLQDLDLSDNLLS 197 (885)
Q Consensus 171 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 197 (885)
+|++..+..|..+++|++|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 666444444555666666666666555
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.44 E-value=3.8e-13 Score=130.64 Aligned_cols=104 Identities=30% Similarity=0.428 Sum_probs=59.6
Q ss_pred CEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCcccccccc
Q 047790 115 KMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDN 194 (885)
Q Consensus 115 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 194 (885)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|+.+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45566666654 4555443 55666666666666555555666666666666666665444444555666666666666
Q ss_pred ccCCCCCcccccccccccEEEeecccCc
Q 047790 195 LLSGSLPVSLLKNLQSLSYLDVSNNLLS 222 (885)
Q Consensus 195 ~l~~~~p~~~~~~l~~L~~L~Ls~N~l~ 222 (885)
+|+ .+|...|..+++|++|+|++|++.
T Consensus 92 ~l~-~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLK-SIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCC-CCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccc-eeCHHHhccccCCCEEEeCCCCcc
Confidence 665 455544555666666666666555
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.31 E-value=2.2e-12 Score=140.84 Aligned_cols=108 Identities=20% Similarity=0.254 Sum_probs=50.5
Q ss_pred cccCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCC-CcccCcCCcCccCcCCCCEEeccCCcCCCCCCccc
Q 047790 54 CHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSK-NLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQL 132 (885)
Q Consensus 54 c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~-n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~ 132 (885)
|.|.+|.|... ++++ .+|. +..+++|++|+|++ |.+++..+..|++|++|++|+|++|+|++..|..|
T Consensus 8 C~~~~v~~~~~---------n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 76 (347)
T 2ifg_A 8 HGSSGLRCTRD---------GALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAF 76 (347)
T ss_dssp SSSSCEECCSS---------CCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGG
T ss_pred ccCCEEEcCCC---------CCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHh
Confidence 67766666431 0233 2444 55555555555553 55544444444455555555555555444444444
Q ss_pred cccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCC
Q 047790 133 GLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLN 173 (885)
Q Consensus 133 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 173 (885)
+.|++|++|+|++|+|++..+..|..++ |+.|+|++|.+.
T Consensus 77 ~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 77 HFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp GSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred cCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 4444444444444444433333333332 444444444443
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.31 E-value=2e-10 Score=127.51 Aligned_cols=87 Identities=11% Similarity=0.204 Sum_probs=41.1
Q ss_pred ccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCC
Q 047790 348 VIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGD 427 (885)
Q Consensus 348 ~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 427 (885)
....+|.++.+|+.+.+..+.. .+...+|.++..|+.+.+. +.++.+...+|.++.+|+.+++..+ ++.+-..+|.+
T Consensus 256 i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~ 332 (394)
T 4gt6_A 256 IETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAG 332 (394)
T ss_dssp ECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT
T ss_pred cccceeeecccccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhC
Confidence 3344455555555555543322 2333445555555555553 3333344445555555555555433 33334445555
Q ss_pred CCcccEEEcC
Q 047790 428 CISLNTLDLG 437 (885)
Q Consensus 428 l~~L~~L~Ls 437 (885)
+.+|+.+.+.
T Consensus 333 C~~L~~i~ip 342 (394)
T 4gt6_A 333 CEQLERIAIP 342 (394)
T ss_dssp CTTCCEEEEC
T ss_pred CCCCCEEEEC
Confidence 5555555553
No 402
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.29 E-value=9.9e-11 Score=129.95 Aligned_cols=111 Identities=13% Similarity=0.232 Sum_probs=65.4
Q ss_pred cCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCC
Q 047790 349 IPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDC 428 (885)
Q Consensus 349 ~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 428 (885)
....|.++.+|+.+.+. +.+..+...+|.++.+|+.++|..+ ++.+...+|.++++|+.+.+..+ ++.+-..+|.++
T Consensus 280 ~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C 356 (394)
T 4gt6_A 280 GTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNC 356 (394)
T ss_dssp CTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTC
T ss_pred cCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCC
Confidence 34455566666666664 3444455566777777777777654 55566677788888888887644 665556778888
Q ss_pred CcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccc
Q 047790 429 ISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLL 481 (885)
Q Consensus 429 ~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l 481 (885)
.+|+.+++.+|... -..+....+|+.+.+..|.+
T Consensus 357 ~~L~~i~~~~~~~~-------------------~~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 357 TALNNIEYSGSRSQ-------------------WNAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TTCCEEEESSCHHH-------------------HHTCBCCCCC----------
T ss_pred CCCCEEEECCceee-------------------hhhhhccCCCCEEEeCCCCE
Confidence 88888877766532 13445556677666665544
No 403
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.28 E-value=5e-12 Score=137.99 Aligned_cols=105 Identities=23% Similarity=0.208 Sum_probs=94.7
Q ss_pred EEecCCC-cccCcCCcCccCcCCCCEEeccC-CcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccC
Q 047790 92 ILDLSKN-LLFGQLSPQVSNLKRLKMLSVGE-NQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSG 169 (885)
Q Consensus 92 ~L~Ls~n-~l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 169 (885)
.++++++ .+++ +|. +..+++|++|+|++ |+|++..|..|+.|++|++|+|++|+|++..|..|+++++|++|+|++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4688888 8874 777 99999999999996 999988888999999999999999999999999999999999999999
Q ss_pred CcCCccCCcccCCCCCCccccccccccCCC
Q 047790 170 NGLNGTIPSRLGDLTQLQDLDLSDNLLSGS 199 (885)
Q Consensus 170 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 199 (885)
|+|++..+..|..++ |+.|+|++|.+...
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 999976666677666 99999999999843
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.25 E-value=7.1e-14 Score=153.17 Aligned_cols=40 Identities=23% Similarity=0.143 Sum_probs=17.2
Q ss_pred CCCCcEEEecCCcccccc----cccccCCCCCcEEEccCCCCcC
Q 047790 261 CSMLKYISLSNNKLSGPI----PRELCNSGSLVEINLDGNMLSG 300 (885)
Q Consensus 261 l~~L~~L~Ls~N~l~~~~----p~~l~~l~~L~~L~L~~N~l~~ 300 (885)
+++|++|+|++|.|++.. +..+...++|++|+|++|.|+.
T Consensus 210 ~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 210 NRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp CSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred CCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 344555555555554321 1222233444444444444443
No 405
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.24 E-value=8.2e-14 Score=152.71 Aligned_cols=165 Identities=19% Similarity=0.164 Sum_probs=90.8
Q ss_pred cccccEeeeeccCCCCCCCccccC-----CccCceEEccCCcCCccCCccc-CCCCCCccccccccccCCCCCcccc---
Q 047790 135 LTRLETISLRSNSFTGEMPSELGD-----IKQLKSLDFSGNGLNGTIPSRL-GDLTQLQDLDLSDNLLSGSLPVSLL--- 205 (885)
Q Consensus 135 l~~L~~L~Ls~N~l~~~~p~~l~~-----l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~--- 205 (885)
+++|++|+|++|.++......+.. .++|++|+|++|.++......+ ..+++|++|+|++|.++ ......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~-~~~~~~L~~~ 149 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLG-PEACKDLRDL 149 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCC-HHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCC-HHHHHHHHHH
Confidence 355667777777666433333322 2466666666666653322222 23445666666666664 2221112
Q ss_pred --cccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccc----c
Q 047790 206 --KNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPI----P 279 (885)
Q Consensus 206 --~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~----p 279 (885)
...++|++|+|++|.++... ...++..+..+++|++|+|++|.|++.. +
T Consensus 150 L~~~~~~L~~L~Ls~n~l~~~~-------------------------~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~ 204 (372)
T 3un9_A 150 LLHDQCQITTLRLSNNPLTAAG-------------------------VAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLA 204 (372)
T ss_dssp HHSTTCCCCEEECCSSCCHHHH-------------------------HHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHH
T ss_pred HHhcCCccceeeCCCCCCChHH-------------------------HHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHH
Confidence 12345666666666554210 1123334456677778888888776532 4
Q ss_pred ccccCCCCCcEEEccCCCCcCcc----cccccccCCcceeeccccccCCC
Q 047790 280 RELCNSGSLVEINLDGNMLSGTI----EDVFDRCTNLSELVLVNNRISGS 325 (885)
Q Consensus 280 ~~l~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~ 325 (885)
..+...++|++|+|++|.|+... +..+...++|++|+|++|.|++.
T Consensus 205 ~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 205 AQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp HHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred HHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 45566677777777777776533 23344557777777777777643
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.18 E-value=6.5e-11 Score=123.57 Aligned_cols=142 Identities=13% Similarity=0.004 Sum_probs=111.8
Q ss_pred EEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeEEEEeccc
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
.|++....+.|+.+.||++... ++.+++|...........++.+|+++++.+. +..+.++++++...+..|+||||++
T Consensus 15 ~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~ 93 (263)
T 3tm0_A 15 KYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEAD 93 (263)
T ss_dssp TSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCS
T ss_pred cceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecC
Confidence 4778888888999999999864 6789999987543233456889999999885 6778899999988889999999999
Q ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccC------------------------------------------
Q 047790 741 NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGF------------------------------------------ 778 (885)
Q Consensus 741 ~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~------------------------------------------ 778 (885)
|.++.+.... ......++.+++++++.||...
T Consensus 94 G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (263)
T 3tm0_A 94 GVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDP 167 (263)
T ss_dssp SEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSH
T ss_pred CeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCH
Confidence 9999876321 1123467889999999999510
Q ss_pred --------------CCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 779 --------------KPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 779 --------------~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
...++|||++|.||+++++..+.++||+.+..
T Consensus 168 ~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 168 RELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp HHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 14589999999999998765667999997754
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.05 E-value=9.7e-09 Score=113.25 Aligned_cols=314 Identities=10% Similarity=0.066 Sum_probs=159.8
Q ss_pred ccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCc
Q 047790 84 LFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLK 163 (885)
Q Consensus 84 l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 163 (885)
...-++|+.+.+.. .++.....+|.++++|+.++|..+ ++..-..+|.+. +|+.+.+..+ ++.....+|.. .+|+
T Consensus 42 ~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~ 116 (379)
T 4h09_A 42 YKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLD 116 (379)
T ss_dssp GGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCS
T ss_pred cccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcc
Confidence 34445566666653 355455566777777777777643 553444556655 5666666543 44233344444 3677
Q ss_pred eEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccc
Q 047790 164 SLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIG 243 (885)
Q Consensus 164 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n 243 (885)
.+.+..+- ......+|.+. +|+.+.+..+ ++ .+....|....+++...+..+.........+ ....
T Consensus 117 ~i~lp~~~-~~i~~~~F~~~-~l~~~~~~~~-v~-~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~-~~~~--------- 182 (379)
T 4h09_A 117 DFEFPGAT-TEIGNYIFYNS-SVKRIVIPKS-VT-TIKDGIGYKAENLEKIEVSSNNKNYVAENYV-LYNK--------- 182 (379)
T ss_dssp EEECCTTC-CEECTTTTTTC-CCCEEEECTT-CC-EECSCTTTTCTTCCEEEECTTCSSEEEETTE-EEET---------
T ss_pred cccCCCcc-ccccccccccc-eeeeeeccce-ee-ccccchhcccccccccccccccceeecccce-eccc---------
Confidence 77776543 22334445443 4555544433 33 4445556666666666665544321100000 0000
Q ss_pred cccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccC
Q 047790 244 PYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRIS 323 (885)
Q Consensus 244 ~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 323 (885)
.......+.....+..+.+....-. .....+....+|+.+.+..+ ++.+...+|..+..|+.+.+..+ ++
T Consensus 183 -------~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~ 252 (379)
T 4h09_A 183 -------NKTILESYPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VT 252 (379)
T ss_dssp -------TSSEEEECCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CC
T ss_pred -------ccceeccccccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-cc
Confidence 0011112233344444444333222 33445555566666666543 44455556666666666666554 33
Q ss_pred CCCCcccCCC-CceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCccccc
Q 047790 324 GSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIG 402 (885)
Q Consensus 324 ~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 402 (885)
.+....+... .++.+.+.. .++......|.++.+|+.+.+.++.++.+...+|.++.+|+.+.|..+ ++.+-..+|.
T Consensus 253 ~I~~~aF~~~~~l~~i~l~~-~i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~ 330 (379)
T 4h09_A 253 SIGSFLLQNCTALKTLNFYA-KVKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFK 330 (379)
T ss_dssp EECTTTTTTCTTCCEEEECC-CCSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT
T ss_pred EeCccccceeehhccccccc-cceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhh
Confidence 3333344433 455555533 244444455666666666666666565555566666666666666543 4445555666
Q ss_pred ccccccceecccccccCcCCCccCCCC
Q 047790 403 NLTNIQILKLNSNFFDGIIPMEFGDCI 429 (885)
Q Consensus 403 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 429 (885)
++++|+.+.+..+ ++.+-..+|.++.
T Consensus 331 ~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 331 NCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp TCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred CCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 6666666666543 4444445555543
No 408
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.00 E-value=9.1e-10 Score=114.64 Aligned_cols=135 Identities=15% Similarity=0.069 Sum_probs=99.1
Q ss_pred eecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCC--ccceeeeeEeCCeeEEEEecccC
Q 047790 664 VFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQN--LVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 664 ~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~--i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
.+....+.|..+.||++...+|+.+++|..... ....+..|+++++.+.+.. +.+++++...++..++||||++|
T Consensus 23 ~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G 99 (264)
T 1nd4_A 23 DWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPG 99 (264)
T ss_dssp EEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSS
T ss_pred ceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCC
Confidence 333333456679999998877888999997543 2345778999998886543 56688888877788999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccC-------------------------------------------
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGF------------------------------------------- 778 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~------------------------------------------- 778 (885)
.++. ... .+ ...++.++++.++.+|...
T Consensus 100 ~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (264)
T 1nd4_A 100 QDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAEL 170 (264)
T ss_dssp EETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHH
T ss_pred cccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHH
Confidence 8873 211 12 2356777888888888421
Q ss_pred ------------CCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 779 ------------KPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 779 ------------~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
..+++|||++|.||++++++.+.++||+.+..
T Consensus 171 ~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 171 FARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11299999999999998776677999998754
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.96 E-value=2.5e-08 Score=109.93 Aligned_cols=84 Identities=8% Similarity=0.122 Sum_probs=57.6
Q ss_pred ccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccc
Q 047790 130 SQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQ 209 (885)
Q Consensus 130 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~ 209 (885)
+++....+|+.+.+.. .++.+...+|.++.+|+.++|..+ ++.+...+|.+. +|+.+.+..+ ++ .++..+|...
T Consensus 40 ~~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~-~I~~~aF~~~- 113 (379)
T 4h09_A 40 PWYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VK-KFGDYVFQGT- 113 (379)
T ss_dssp TTGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CC-EECTTTTTTC-
T ss_pred cccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-ee-EeccceeccC-
Confidence 4566677888888864 366555667888888888888654 665666677776 6777766544 44 6666667654
Q ss_pred cccEEEeecc
Q 047790 210 SLSYLDVSNN 219 (885)
Q Consensus 210 ~L~~L~Ls~N 219 (885)
+|+.+.+.++
T Consensus 114 ~L~~i~lp~~ 123 (379)
T 4h09_A 114 DLDDFEFPGA 123 (379)
T ss_dssp CCSEEECCTT
T ss_pred CcccccCCCc
Confidence 6888877654
No 410
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.94 E-value=6.2e-12 Score=129.18 Aligned_cols=173 Identities=18% Similarity=0.190 Sum_probs=78.4
Q ss_pred CCHHHHHHHHHHHHhCCC-CCCCCCCC--C------------CCCCcccCCccccCC--cEEEEEEec---ccccccccc
Q 047790 23 EPKQERRSLVHFKNSLQN-PQVLSGWN--K------------TTRHCHWFGVKCRHS--RVVSLVIQT---QSLKGPVSP 82 (885)
Q Consensus 23 ~~~~~~~aLl~~k~~~~~-~~~~~~w~--~------------~~~~c~w~gv~c~~~--~v~~l~l~~---~~l~g~~~~ 82 (885)
+..-|++.|+.+-+.... +=....|. . ....|.|.|+.|+.. +|+.+...+ ..+.|.+.+
T Consensus 32 g~ky~k~~ll~~i~~~~~~~f~p~~~~~~~~~~~ffV~~~~~A~~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~ 111 (267)
T 3rw6_A 32 GRKYDKAWLLSMIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKILDRENRRISIIINSSAPPHTILNELKP 111 (267)
T ss_dssp GGGSCHHHHHHHHHHTCSSCCCCEEEEEETTEEEEEESCHHHHHHHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCH
T ss_pred ccccCHHHHHHHHHHhCCCCcEeEEEEEeCCEEEEEeCChHHHHHHHhcCcEEECCCCCEEEEEEecCCCcccccccCCH
Confidence 455577888888776542 11122231 0 112488999999865 776665554 344555543
Q ss_pred -cccCCCCCCEEecCCCcccCcCCc-CccCcCCCCE--EeccCCcCCCCCCcc----ccccccccEeeeeccCCCC--CC
Q 047790 83 -FLFNLSSLRILDLSKNLLFGQLSP-QVSNLKRLKM--LSVGENQLSGSIPSQ----LGLLTRLETISLRSNSFTG--EM 152 (885)
Q Consensus 83 -~l~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~--L~L~~n~l~~~~p~~----~~~l~~L~~L~Ls~N~l~~--~~ 152 (885)
.+..++. .|...+|.-++.++- .+...+.|+. ++++.|+.. .++.. ..++++|++|+|++|+|++ .+
T Consensus 112 ~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l 188 (267)
T 3rw6_A 112 EQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDM 188 (267)
T ss_dssp HHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGG
T ss_pred HHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccc
Confidence 1222221 122222222221111 1333333333 444444322 11211 1234555555555555554 23
Q ss_pred CccccCCccCceEEccCCcCCccCCcccCCCC--CCccccccccccCCCC
Q 047790 153 PSELGDIKQLKSLDFSGNGLNGTIPSRLGDLT--QLQDLDLSDNLLSGSL 200 (885)
Q Consensus 153 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~ 200 (885)
|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+++.+
T Consensus 189 ~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~ 236 (267)
T 3rw6_A 189 SSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTF 236 (267)
T ss_dssp TTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGC
T ss_pred hhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCcccc
Confidence 34444555555555555555533 1122222 4555555555554333
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.83 E-value=8.2e-10 Score=119.76 Aligned_cols=205 Identities=14% Similarity=0.168 Sum_probs=116.6
Q ss_pred CCCCEEeccCCcCCC-CC-------CccccccccccEeeeeccCCC---------CCCCccccCCccCceEEccCCcCCc
Q 047790 112 KRLKMLSVGENQLSG-SI-------PSQLGLLTRLETISLRSNSFT---------GEMPSELGDIKQLKSLDFSGNGLNG 174 (885)
Q Consensus 112 ~~L~~L~L~~n~l~~-~~-------p~~~~~l~~L~~L~Ls~N~l~---------~~~p~~l~~l~~L~~L~Ls~N~l~~ 174 (885)
++++.|.+......+ .. ..++..+++|+.|.+..+... +.++..+..+++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 457788888666552 21 334556789999988765432 123344556778888888776311
Q ss_pred cCCcccCCCCCCccccccccccCCCCCccccc--ccccccEEEeecc--cCcccCCccccCCCcccceeccccccccccc
Q 047790 175 TIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLK--NLQSLSYLDVSNN--LLSGNIPPEIGNLKKLSDLYLGIGPYQLSLF 250 (885)
Q Consensus 175 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--~l~~L~~L~Ls~N--~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~ 250 (885)
.++. +. +++|++|+|..|.+..... ..+. .+++|++|+|+.+ ...+.. .+.
T Consensus 186 ~l~~-~~-~~~L~~L~L~~~~l~~~~l-~~l~~~~lp~L~~L~L~~~~~~~~~~~--~~~-------------------- 240 (362)
T 2ra8_A 186 SIGK-KP-RPNLKSLEIISGGLPDSVV-EDILGSDLPNLEKLVLYVGVEDYGFDG--DMN-------------------- 240 (362)
T ss_dssp BCCS-CB-CTTCSEEEEECSBCCHHHH-HHHHHSBCTTCCEEEEECBCGGGTCCS--CGG--------------------
T ss_pred eecc-cc-CCCCcEEEEecCCCChHHH-HHHHHccCCCCcEEEEeccccccccch--hHH--------------------
Confidence 2232 33 6777777777776642111 1122 5677777776531 111100 000
Q ss_pred ccccCccc--cCCCCCcEEEecCCccccccccccc---CCCCCcEEEccCCCCcCcc----cccccccCCcceeeccccc
Q 047790 251 VGRITPEI--GNCSMLKYISLSNNKLSGPIPRELC---NSGSLVEINLDGNMLSGTI----EDVFDRCTNLSELVLVNNR 321 (885)
Q Consensus 251 ~~~~~~~l--~~l~~L~~L~Ls~N~l~~~~p~~l~---~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~ 321 (885)
.+.+.+ ..+++|++|+|++|.+.+..+..+. .+++|++|+|+.|.+++.. +..+..+++|+.|+|++|.
T Consensus 241 --~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~ 318 (362)
T 2ra8_A 241 --VFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNY 318 (362)
T ss_dssp --GTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBB
T ss_pred --HHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCc
Confidence 011111 2467899999999888765444333 4678888888888887642 3333567888888888887
Q ss_pred cCCCCCcccCCCCceeEEeecCc
Q 047790 322 ISGSIPEYISELPLKVFDLQYNN 344 (885)
Q Consensus 322 l~~~~p~~~~~~~L~~L~Ls~N~ 344 (885)
|+...-..+...-...++++.++
T Consensus 319 i~d~~~~~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 319 LSDEMKKELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp CCHHHHHHHHHHCCSEEECCSBC
T ss_pred CCHHHHHHHHHHcCCEEEecCCc
Confidence 76432222222112345666555
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.80 E-value=1e-09 Score=119.00 Aligned_cols=60 Identities=15% Similarity=0.153 Sum_probs=39.5
Q ss_pred CCCCcEEEecCCcccccc----cccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccc
Q 047790 261 CSMLKYISLSNNKLSGPI----PRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNR 321 (885)
Q Consensus 261 l~~L~~L~Ls~N~l~~~~----p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 321 (885)
+++|++|+|+.|.+++.. +..+..+++|+.|+|++|.|+......+...- ...+++++++
T Consensus 278 ~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al-g~~~~~~~~~ 341 (362)
T 2ra8_A 278 LPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL-PMKIDVSDSQ 341 (362)
T ss_dssp GGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC-CSEEECCSBC
T ss_pred CCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc-CCEEEecCCc
Confidence 567888888888877643 33334567888888888887765544444311 3567887776
No 413
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.79 E-value=1e-08 Score=112.10 Aligned_cols=141 Identities=18% Similarity=0.235 Sum_probs=104.3
Q ss_pred cceecccCCceEEEEEeCCCCeEEEEEec--ccc-cccHHHHHHHHHHhcccCC--CCccceeeeeEeC---CeeEEEEe
Q 047790 666 ENVIGGGGFRTAFKGTMPDQKTVAVKKLS--QAT-GQCDREFAAEMETLDMVKH--QNLVQLLGYCSVG---EEKLLVYE 737 (885)
Q Consensus 666 ~~~lG~G~~g~vy~a~~~~~~~valK~~~--~~~-~~~~~~~~~E~~~l~~l~~--~~i~~~~~~~~~~---~~~~lv~e 737 (885)
.+.++.|.++.||++...+ +.+++|+.. ... ......+.+|.++++.+.. ..+++++.++.+. +..|+|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 4567889999999998754 678888875 322 1234578889999999874 5578888887765 45799999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccC---------------------------------------
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGF--------------------------------------- 778 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~--------------------------------------- 778 (885)
|++|..+.+. ....++......++.+++.+++.+|...
T Consensus 122 ~v~G~~l~~~---~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (359)
T 3dxp_A 122 FVSGRVLWDQ---SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMD 198 (359)
T ss_dssp CCCCBCCCCT---TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHH
T ss_pred ecCCeecCCC---ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHH
Confidence 9998776431 1123677888899999999999999521
Q ss_pred ----------------CCCceecCCCCCcEEEcCCCc--EEEeeccCccc
Q 047790 779 ----------------KPYIIHMDIKTSNILLNDYFE--AKVSDFGLARL 810 (885)
Q Consensus 779 ----------------~~~i~H~dlkp~Nil~~~~~~--vkl~Dfg~a~~ 810 (885)
...++|||+++.||+++.++. +.++||+.+..
T Consensus 199 ~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 199 SLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999987653 68999998864
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.64 E-value=1.5e-08 Score=107.91 Aligned_cols=185 Identities=18% Similarity=0.153 Sum_probs=119.3
Q ss_pred ceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccC-CCC--ccceeeeeEeCC---eeEEEEeccc
Q 047790 667 NVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQN--LVQLLGYCSVGE---EKLLVYEYMV 740 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-~~~--i~~~~~~~~~~~---~~~lv~e~~~ 740 (885)
+.++.|....||++. +.+++|+.... .....+.+|.++++.+. +.. +.+++....... ..|+||++++
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 458889999999864 56888886433 23467889999998874 322 444544443332 3478999999
Q ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccC------------------------------------------
Q 047790 741 NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGF------------------------------------------ 778 (885)
Q Consensus 741 ~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~------------------------------------------ 778 (885)
|.++.+... ..++..+...++.+++..++.+|...
T Consensus 100 G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 176 (304)
T 3sg8_A 100 GVPLTPLLL---NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDF 176 (304)
T ss_dssp CEECCHHHH---HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHH
T ss_pred CeECCcccc---ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHH
Confidence 988765332 12667777888888888888888411
Q ss_pred -------------CCCceecCCCCCcEEEcC--CCcEEEeeccCcccccCCCCCcccCCCCCCccCCccccc----CC-C
Q 047790 779 -------------KPYIIHMDIKTSNILLND--YFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQ----AG-R 838 (885)
Q Consensus 779 -------------~~~i~H~dlkp~Nil~~~--~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~----~~-~ 838 (885)
...++|+|++|.||++++ ...+.++||+.+..-.+......... .... ..|+... .. .
T Consensus 177 ~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~-~~~~-~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 177 YRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLME-DDEE-YGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCC-TTTS-CCHHHHHHHHHHHTC
T ss_pred HHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHh-hccc-cCHHHHHHHHHHcCC
Confidence 135799999999999997 55678999998865322100000000 0000 1222111 00 0
Q ss_pred C---------CCcchhHHHHHHHHHHHhCCCCC
Q 047790 839 A---------NERGDIYSFGVILLELVTGKQPT 862 (885)
Q Consensus 839 ~---------~~~~DvwslGvvl~elltg~~P~ 862 (885)
. ....+.|++++++|.+.+|..+|
T Consensus 255 ~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 255 KDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 0 11258999999999999999875
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.44 E-value=6e-09 Score=101.91 Aligned_cols=94 Identities=15% Similarity=0.166 Sum_probs=47.9
Q ss_pred ccccccCCCCCCEEecCCC-cccCc----CCcCccCcCCCCEEeccCCcCCCC----CCccccccccccEeeeeccCCCC
Q 047790 80 VSPFLFNLSSLRILDLSKN-LLFGQ----LSPQVSNLKRLKMLSVGENQLSGS----IPSQLGLLTRLETISLRSNSFTG 150 (885)
Q Consensus 80 ~~~~l~~l~~L~~L~Ls~n-~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~ 150 (885)
+...+...+.|++|+|++| .+... +...+...++|++|+|++|+|... +...+...++|++|+|++|.|+.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3445666777777777777 66432 233344456666666666666532 12223333455555555555542
Q ss_pred C----CCccccCCccCceEEc--cCCcCC
Q 047790 151 E----MPSELGDIKQLKSLDF--SGNGLN 173 (885)
Q Consensus 151 ~----~p~~l~~l~~L~~L~L--s~N~l~ 173 (885)
. +...+...+.|++|+| ++|.|.
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 2 2233334444555555 444444
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.37 E-value=2.3e-08 Score=102.67 Aligned_cols=105 Identities=27% Similarity=0.303 Sum_probs=75.2
Q ss_pred ccCCCCCCE--EecCCCcc---cCcCCcCccCcCCCCEEeccCCcCCC--CCCccccccccccEeeeeccCCCCCCCccc
Q 047790 84 LFNLSSLRI--LDLSKNLL---FGQLSPQVSNLKRLKMLSVGENQLSG--SIPSQLGLLTRLETISLRSNSFTGEMPSEL 156 (885)
Q Consensus 84 l~~l~~L~~--L~Ls~n~l---~~~~~~~~~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l 156 (885)
+...+.|+. ++++.|.. .+.++....++++|+.|+|++|+|++ .+|..+..+++|++|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 334444555 67777743 22222223568899999999999997 4567788999999999999999965 345
Q ss_pred cCCc--cCceEEccCCcCCccCCc-------ccCCCCCCcccc
Q 047790 157 GDIK--QLKSLDFSGNGLNGTIPS-------RLGDLTQLQDLD 190 (885)
Q Consensus 157 ~~l~--~L~~L~Ls~N~l~~~~p~-------~~~~l~~L~~L~ 190 (885)
..++ +|++|+|++|.+.+.+|. .+..+++|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 5555 999999999999876663 245666666665
No 417
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.35 E-value=1.3e-06 Score=93.45 Aligned_cols=133 Identities=16% Similarity=0.182 Sum_probs=96.8
Q ss_pred cceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCC----CCccceeeeeEeCCeeEEEEecccC
Q 047790 666 ENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKH----QNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 666 ~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~----~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
.+.++.|....||++ ++.+++|+..... ....+.+|.++++.+.+ ..|.+++++ +..++||||++|
T Consensus 42 v~~l~~G~~n~vy~v----g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G 111 (320)
T 3r70_A 42 LRYLSSGDDSDTFLC----NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKG 111 (320)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCC
T ss_pred EEeCCCCCCceEEEE----CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCC
Confidence 457888999999998 6678888764322 23568899999988865 124444444 567899999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCC------------------------------------------
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFK------------------------------------------ 779 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~------------------------------------------ 779 (885)
.++..... ..++......++.+++..++.+|....
T Consensus 112 ~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (320)
T 3r70_A 112 ERITYEQY---HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEH 188 (320)
T ss_dssp BCCCHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred cccccccc---ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchHH
Confidence 88864322 125666677778888888888874322
Q ss_pred ------------------CCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 780 ------------------PYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 780 ------------------~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
..++|+|++|.||+++++..+.++||+.+..-
T Consensus 189 ~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 189 IETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23499999999999998666799999998653
No 418
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.26 E-value=7.9e-06 Score=85.08 Aligned_cols=134 Identities=13% Similarity=0.076 Sum_probs=97.1
Q ss_pred ecccCCc-eEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeEEEEecccCCCHH
Q 047790 669 IGGGGFR-TAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKLLVYEYMVNGSLD 745 (885)
Q Consensus 669 lG~G~~g-~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~sL~ 745 (885)
+..|..+ .||+.... ++..+++|+-... ....+.+|.+.++.+. +-.|.+++.++.+.+..++|||+++|.++.
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~ 108 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF 108 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence 3445554 68988765 4667888886433 3567888999998876 334778889988889999999999998887
Q ss_pred HHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccC-----------------------------------------------
Q 047790 746 DWLRNRAASLDWGKRCKIAYGAARGISFLHHGF----------------------------------------------- 778 (885)
Q Consensus 746 ~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~----------------------------------------------- 778 (885)
+..... ......++.++...++.||...
T Consensus 109 ~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 183 (272)
T 4gkh_A 109 QVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEM 183 (272)
T ss_dssp HHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHH
T ss_pred ccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHH
Confidence 765431 1223456667777777777311
Q ss_pred --------CCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 779 --------KPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 779 --------~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
...++|+|+.+.||++++.+.+-|+||+.+..
T Consensus 184 ~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 184 HKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 11268999999999999887778999998764
No 419
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.25 E-value=4.4e-06 Score=87.56 Aligned_cols=75 Identities=20% Similarity=0.228 Sum_probs=59.5
Q ss_pred cceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCC---CccceeeeeEeCCeeEEEEecccCC
Q 047790 666 ENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQ---NLVQLLGYCSVGEEKLLVYEYMVNG 742 (885)
Q Consensus 666 ~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~---~i~~~~~~~~~~~~~~lv~e~~~~~ 742 (885)
.+.+|.|.++.||+++..+|+.+++|+...........+..|++.++.+.+. .+++++++. ..++||||++|+
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~ 95 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDER 95 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccC
Confidence 4578999999999999888999999997543333346789999999999865 567777653 368999999987
Q ss_pred CH
Q 047790 743 SL 744 (885)
Q Consensus 743 sL 744 (885)
.+
T Consensus 96 ~~ 97 (288)
T 3d1u_A 96 PP 97 (288)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.19 E-value=8.4e-06 Score=86.51 Aligned_cols=135 Identities=19% Similarity=0.149 Sum_probs=91.8
Q ss_pred ceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCC---CccceeeeeE-eCCeeEEEEecccCC
Q 047790 667 NVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQ---NLVQLLGYCS-VGEEKLLVYEYMVNG 742 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~---~i~~~~~~~~-~~~~~~lv~e~~~~~ 742 (885)
+.++.|....||+. ++.+++|+-.. ......+.+|.++++.+.+. .|.+++.+.. ..+..++||||++|.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 34677888889987 56788888432 22346788999999998753 3566666664 345678999999998
Q ss_pred CHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcc---------------------------------------------
Q 047790 743 SLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHG--------------------------------------------- 777 (885)
Q Consensus 743 sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~--------------------------------------------- 777 (885)
.+.+..- ..++......++.++...++.||..
T Consensus 99 ~l~~~~~---~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 175 (306)
T 3tdw_A 99 ILGEDGM---AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLR 175 (306)
T ss_dssp ECHHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHH
T ss_pred ECchhhh---hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHH
Confidence 8766321 1134444445555555555555522
Q ss_pred ------------CCCCceecCCCCCcEEEcC---CCc-EEEeeccCccc
Q 047790 778 ------------FKPYIIHMDIKTSNILLND---YFE-AKVSDFGLARL 810 (885)
Q Consensus 778 ------------~~~~i~H~dlkp~Nil~~~---~~~-vkl~Dfg~a~~ 810 (885)
....++|+|++|.||+++. ++. +.++||+.+..
T Consensus 176 ~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 176 FQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1345799999999999987 355 48999998765
No 421
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.16 E-value=2.9e-07 Score=89.81 Aligned_cols=119 Identities=13% Similarity=0.207 Sum_probs=59.9
Q ss_pred cccCCCCCCcccccccc-ccCCC----CCcccccccccccEEEeecccCcccCCccccCCCcccceeccccccccccccc
Q 047790 178 SRLGDLTQLQDLDLSDN-LLSGS----LPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVG 252 (885)
Q Consensus 178 ~~~~~l~~L~~L~Ls~N-~l~~~----~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~ 252 (885)
..+...++|++|+|++| .+... +. ..+...++|++|+|++|++......
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~-~~L~~~~~L~~L~Ls~n~i~~~g~~------------------------- 83 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACA-EALKTNTYVKKFSIVGTRSNDPVAF------------------------- 83 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHH-HHHTTCCSCCEEECTTSCCCHHHHH-------------------------
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHH-HHHHhCCCcCEEECcCCCCChHHHH-------------------------
Confidence 34555666777777776 65411 11 1234445666666666666421110
Q ss_pred ccCccccCCCCCcEEEecCCccccc----ccccccCCCCCcEEEc--cCCCCcCcc----cccccccCCcceeecccccc
Q 047790 253 RITPEIGNCSMLKYISLSNNKLSGP----IPRELCNSGSLVEINL--DGNMLSGTI----EDVFDRCTNLSELVLVNNRI 322 (885)
Q Consensus 253 ~~~~~l~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L--~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l 322 (885)
.+...+...++|++|+|++|.|++. +...+...++|++|+| ++|.|+... .+.+...++|++|+|++|.+
T Consensus 84 ~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 84 ALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 1222233445566666666666643 2344445556666666 556665432 22333345555555555544
No 422
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.05 E-value=4.7e-06 Score=90.70 Aligned_cols=79 Identities=11% Similarity=0.074 Sum_probs=54.7
Q ss_pred ccee-cccCCceEEEEEeC-------CCCeEEEEEecccc---cccHHHHHHHHHHhcccCC---CCccceeeeeEeC--
Q 047790 666 ENVI-GGGGFRTAFKGTMP-------DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKH---QNLVQLLGYCSVG-- 729 (885)
Q Consensus 666 ~~~l-G~G~~g~vy~a~~~-------~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~---~~i~~~~~~~~~~-- 729 (885)
.+.| +.|....+|+.... +++.+++|...... ......+.+|+++++.+.. -.+.+++.+..+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 78888999998754 26678888765432 1112467788888888753 3577788776554
Q ss_pred -CeeEEEEecccCCCH
Q 047790 730 -EEKLLVYEYMVNGSL 744 (885)
Q Consensus 730 -~~~~lv~e~~~~~sL 744 (885)
+..++||||++|..+
T Consensus 105 ~g~~~~v~e~l~G~~l 120 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVP 120 (357)
T ss_dssp TSSCEEEEECCCCBCC
T ss_pred cCCceEEEEecCCCCh
Confidence 356899999988654
No 423
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.02 E-value=1.6e-05 Score=86.41 Aligned_cols=73 Identities=11% Similarity=0.031 Sum_probs=54.6
Q ss_pred cceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCC--CccceeeeeEeC-CeeEEEEecccCC
Q 047790 666 ENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQ--NLVQLLGYCSVG-EEKLLVYEYMVNG 742 (885)
Q Consensus 666 ~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~--~i~~~~~~~~~~-~~~~lv~e~~~~~ 742 (885)
.+.++.|....+|+.+. +++.+++|..... ..+..|.++++.+... .+.+++.+.... +..|+||||++|.
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~ 119 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGV 119 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSE
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCC
Confidence 45678899999999875 5788999987432 3588899999888753 356677766654 5689999999876
Q ss_pred CH
Q 047790 743 SL 744 (885)
Q Consensus 743 sL 744 (885)
++
T Consensus 120 ~l 121 (362)
T 3ovc_A 120 TL 121 (362)
T ss_dssp ET
T ss_pred Cc
Confidence 54
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.79 E-value=4.2e-06 Score=79.41 Aligned_cols=34 Identities=6% Similarity=0.167 Sum_probs=17.5
Q ss_pred CCCEEecCCCcccCcCCcCccCcCCCCEEeccCC
Q 047790 89 SLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGEN 122 (885)
Q Consensus 89 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 122 (885)
.|++|||+++.++..--..+..+++|++|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 3555555555554444444445555555555554
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.77 E-value=0.00014 Score=78.43 Aligned_cols=138 Identities=18% Similarity=0.240 Sum_probs=79.4
Q ss_pred eecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCC--CCccceee------eeEeCCeeEEEEecc
Q 047790 668 VIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKH--QNLVQLLG------YCSVGEEKLLVYEYM 739 (885)
Q Consensus 668 ~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~--~~i~~~~~------~~~~~~~~~lv~e~~ 739 (885)
.++.|..+.||++...++ .+++|+.... ..++..|.++++.+.. -.|.+++. +....+..+++|+|+
T Consensus 39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp ECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 456667889999987554 5889988652 2444556666665541 12344443 223467789999999
Q ss_pred cCCCHH-----------H---HHhh--cCC--C---------CCHHH-------------------------------HH
Q 047790 740 VNGSLD-----------D---WLRN--RAA--S---------LDWGK-------------------------------RC 761 (885)
Q Consensus 740 ~~~sL~-----------~---~l~~--~~~--~---------~~~~~-------------------------------~~ 761 (885)
+|..+. . .++. ... . ..+.. ..
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 886431 1 1111 100 0 11111 01
Q ss_pred HHHHHHHHHHHHHhc----------cCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 762 KIAYGAARGISFLHH----------GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 762 ~i~~~l~~~l~~LH~----------~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
.+..++..++++++. ....+++|||+++.||+++.++.+.++||+.+..
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 111223344555542 1257899999999999998778899999998754
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.77 E-value=3.6e-06 Score=79.88 Aligned_cols=83 Identities=16% Similarity=0.157 Sum_probs=45.2
Q ss_pred CCCCEEeccCCcCCCCCCccccccccccEeeeeccC-CCCCCCccccCC----ccCceEEccCCc-CCccCCcccCCCCC
Q 047790 112 KRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNS-FTGEMPSELGDI----KQLKSLDFSGNG-LNGTIPSRLGDLTQ 185 (885)
Q Consensus 112 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~ 185 (885)
-+|++|||+++.|+..--..+..+++|++|+|++|. ++..--..++.+ ++|++|+|++|. |++..-..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 356777777776665444455666666666666663 543333334443 246666666653 55332233444555
Q ss_pred Ccccccccc
Q 047790 186 LQDLDLSDN 194 (885)
Q Consensus 186 L~~L~Ls~N 194 (885)
|++|+|+++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 555555554
No 427
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.76 E-value=9.4e-05 Score=81.64 Aligned_cols=75 Identities=13% Similarity=0.032 Sum_probs=49.6
Q ss_pred cceecccCCceEEEEEeC-CCCeEEEEEeccccc-------ccHHHHHHHHHHhcccCC--C-CccceeeeeEeCCeeEE
Q 047790 666 ENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-------QCDREFAAEMETLDMVKH--Q-NLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 666 ~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-------~~~~~~~~E~~~l~~l~~--~-~i~~~~~~~~~~~~~~l 734 (885)
.+.+|.|..+.||++... +++.+++|....... ....++..|.++++.+.. | .+.+++.+ +....++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 357899999999999754 467899997643211 123466789999887753 3 34455544 3455689
Q ss_pred EEecccCC
Q 047790 735 VYEYMVNG 742 (885)
Q Consensus 735 v~e~~~~~ 742 (885)
|||++++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.56 E-value=0.00033 Score=73.87 Aligned_cols=75 Identities=17% Similarity=0.194 Sum_probs=59.5
Q ss_pred cceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccC---CCCccceeeeeEeCCeeEEEEecccCC
Q 047790 666 ENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVK---HQNLVQLLGYCSVGEEKLLVYEYMVNG 742 (885)
Q Consensus 666 ~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~---~~~i~~~~~~~~~~~~~~lv~e~~~~~ 742 (885)
.+.++.|....+|+... +++.+++|+.... ....+..|.+.++.+. ...|++++.+....+..++||||++|.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 35688899999999986 5678888886543 2567889999998885 356888888887778899999999987
Q ss_pred CH
Q 047790 743 SL 744 (885)
Q Consensus 743 sL 744 (885)
.+
T Consensus 117 ~~ 118 (312)
T 3jr1_A 117 KN 118 (312)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 429
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.47 E-value=0.00064 Score=71.15 Aligned_cols=75 Identities=20% Similarity=0.255 Sum_probs=56.2
Q ss_pred ecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCC---CccceeeeeEeCCeeEEEEecccC
Q 047790 665 FENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQ---NLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 665 ~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~---~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
-.+.+|.|..+.||+.+..||+.|++|+...........+..|.+.|+.+... .+++++.+ +..++||||+++
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l~~ 94 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECCCC
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEeecc
Confidence 35778999999999999999999999987655444456788999999988532 34455543 234789999976
Q ss_pred CC
Q 047790 742 GS 743 (885)
Q Consensus 742 ~s 743 (885)
+.
T Consensus 95 ~~ 96 (288)
T 3f7w_A 95 RP 96 (288)
T ss_dssp CC
T ss_pred cC
Confidence 53
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.40 E-value=0.0007 Score=75.16 Aligned_cols=80 Identities=10% Similarity=-0.016 Sum_probs=45.8
Q ss_pred CCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCCC---CCCcchhHHHHHHHHHH
Q 047790 779 KPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGR---ANERGDIYSFGVILLEL 855 (885)
Q Consensus 779 ~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---~~~~~DvwslGvvl~el 855 (885)
...++|||++|.||++++++ ++++||+.+..-.+.-.-......-...|++|+...... .....++.+....+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 67899999999999998776 999999988653211000000000012345555433111 11234455667777776
Q ss_pred HhCC
Q 047790 856 VTGK 859 (885)
Q Consensus 856 ltg~ 859 (885)
+++.
T Consensus 310 y~~~ 313 (420)
T 2pyw_A 310 FNKR 313 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6653
No 431
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.38 E-value=0.00016 Score=65.49 Aligned_cols=64 Identities=22% Similarity=0.277 Sum_probs=35.7
Q ss_pred ccccccccCC-CCCCccccCccccceeecccCcCCCCCCCC-ccccccccccccCCccccccccCCcccccccc
Q 047790 574 YLDFSMNMLD-GHIPEKLCSLPYLLYLNLADNRLEGEVPRS-GICQNLSIISLTGNKDLCEKIMGSDCQILTFG 645 (885)
Q Consensus 574 ~L~Ls~N~l~-~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~N~~~c~~~~~~~c~~~~~~ 645 (885)
.++.+++.|+ ..+|..+. ++|++|+|++|+|+..++.. ..+.+++.+++.+|||.| ||.+.|+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C------dC~l~~l~ 77 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC------DCRLVPLR 77 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC------SGGGHHHH
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeec------cCccHHHH
Confidence 4445555553 23443321 23555555555555433322 233455667888899999 89987764
No 432
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.00 E-value=0.0015 Score=68.75 Aligned_cols=71 Identities=13% Similarity=0.095 Sum_probs=44.1
Q ss_pred cceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCc-cceeeeeEeCCeeEEEEecc-cCCC
Q 047790 666 ENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNL-VQLLGYCSVGEEKLLVYEYM-VNGS 743 (885)
Q Consensus 666 ~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~e~~-~~~s 743 (885)
.+.++.|....+|++ +.+++|+....... ..+..+|.++++.+....+ .+++.+ +.+..++++||+ +|.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence 466778888999998 56888887643211 1223568888877753333 455544 334457899999 6644
Q ss_pred H
Q 047790 744 L 744 (885)
Q Consensus 744 L 744 (885)
+
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 3
No 433
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.96 E-value=0.0017 Score=69.44 Aligned_cols=139 Identities=14% Similarity=0.090 Sum_probs=73.1
Q ss_pred eecccCCce-EEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCC--CCccceeeeeEeCCeeEEEEecccCCCH
Q 047790 668 VIGGGGFRT-AFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKH--QNLVQLLGYCSVGEEKLLVYEYMVNGSL 744 (885)
Q Consensus 668 ~lG~G~~g~-vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~--~~i~~~~~~~~~~~~~~lv~e~~~~~sL 744 (885)
.++.|+... +|+....+++.+++|...... ...+..|+++++.+.. -.+.+++.+... ..+++||++.+..+
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~--~g~ll~e~l~~~~l 99 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHA--RGLLLIEDLGDALF 99 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETT--TTEEEECCCCSCBH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCC--CCEEEEeeCCCcch
Confidence 344454443 667765446778887654322 1234556777776642 235566665332 23789999977666
Q ss_pred HHHHhhc-------------------C------CCCCHHHHHH--------------------HHHHHHHHHHHHh---c
Q 047790 745 DDWLRNR-------------------A------ASLDWGKRCK--------------------IAYGAARGISFLH---H 776 (885)
Q Consensus 745 ~~~l~~~-------------------~------~~~~~~~~~~--------------------i~~~l~~~l~~LH---~ 776 (885)
.+++... . ..++...... ....+...++.+. .
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~ 179 (333)
T 3csv_A 100 TEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQL 179 (333)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 5443210 0 0112111100 0011111222221 1
Q ss_pred cCCCCceecCCCCCcEEEcCC----CcEEEeeccCcccc
Q 047790 777 GFKPYIIHMDIKTSNILLNDY----FEAKVSDFGLARLI 811 (885)
Q Consensus 777 ~~~~~i~H~dlkp~Nil~~~~----~~vkl~Dfg~a~~~ 811 (885)
.....++|||+.+.||+++.+ +.+.++||+.+..-
T Consensus 180 ~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 180 EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 125679999999999999874 67999999987653
No 434
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.90 E-value=0.0081 Score=63.92 Aligned_cols=139 Identities=12% Similarity=0.106 Sum_probs=81.5
Q ss_pred eecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCC--Cccceeee-----eEeCCeeEEEEeccc
Q 047790 668 VIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQ--NLVQLLGY-----CSVGEEKLLVYEYMV 740 (885)
Q Consensus 668 ~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~--~i~~~~~~-----~~~~~~~~lv~e~~~ 740 (885)
.++ |....||++...+|+.+++|...... .....+..|.++++.+... .+++++.. ...++..+++|+|++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 355 77789999887778789999986332 2346677788888777522 24444432 233556789999998
Q ss_pred CCCHH-----H------H---Hhh--cC------CCCCHHHH----------------------HHHHHHHHHHHHHHhc
Q 047790 741 NGSLD-----D------W---LRN--RA------ASLDWGKR----------------------CKIAYGAARGISFLHH 776 (885)
Q Consensus 741 ~~sL~-----~------~---l~~--~~------~~~~~~~~----------------------~~i~~~l~~~l~~LH~ 776 (885)
|..+. . . ++. .. ...+.... ...+.+++..++....
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR 190 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 74321 1 1 110 00 01121111 1111122222222210
Q ss_pred -cCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 777 -GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 777 -~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
.....++|||+++.||+++ + .+.++||+.+..
T Consensus 191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1256789999999999999 4 899999988754
No 435
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.83 E-value=0.00016 Score=69.84 Aligned_cols=93 Identities=12% Similarity=0.157 Sum_probs=47.9
Q ss_pred ccccccccEEEccCCcccccCcccc----cccccccceecccccccCc----CCCccCCCCcccEEEcCCcc---cCcce
Q 047790 377 ISNAVALEKLDLSSNMLTRQIPKKI----GNLTNIQILKLNSNFFDGI----IPMEFGDCISLNTLDLGSNN---LNGCV 445 (885)
Q Consensus 377 ~~~l~~L~~L~Ls~N~l~~~~p~~~----~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~---l~~~~ 445 (885)
+..-+.|+.|+|++|+|...-...+ ..-+.|+.|+|++|.|... +-+.+..-+.|++|+|++|. +...
T Consensus 66 L~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~- 144 (197)
T 1pgv_A 66 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQ- 144 (197)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHH-
T ss_pred HhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHH-
Confidence 3444566666666666654333332 2335666666666666532 22344455567777776442 2100
Q ss_pred eEEEEeecCCcccCCCchhcccCCCCCEEeccCccc
Q 047790 446 VVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLL 481 (885)
Q Consensus 446 ~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l 481 (885)
....+...+..-+.|+.|+++.|.+
T Consensus 145 -----------g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 145 -----------VEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp -----------HHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred -----------HHHHHHHHHHhCCCcCeEeccCCCc
Confidence 0002334455556666676665544
No 436
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.83 E-value=0.0023 Score=69.34 Aligned_cols=139 Identities=17% Similarity=0.158 Sum_probs=80.9
Q ss_pred ceecccCCceEEEEEeC--------CCCeEEEEEecccccccHHHHHHHHHHhcccCC-CCccceeeeeEeCCeeEEEEe
Q 047790 667 NVIGGGGFRTAFKGTMP--------DQKTVAVKKLSQATGQCDREFAAEMETLDMVKH-QNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~--------~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~e 737 (885)
+.+..|-...+|++... +++.+++|+.-. .........+|.++++.+.. .-..++++++.. .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-ILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 35666777888998764 257788888633 22235667789999988863 334566655542 28999
Q ss_pred cccCCCHH--------------HHHh---hc----CCCCC--HHHHHHHHHHHHH-------------------HHHH--
Q 047790 738 YMVNGSLD--------------DWLR---NR----AASLD--WGKRCKIAYGAAR-------------------GISF-- 773 (885)
Q Consensus 738 ~~~~~sL~--------------~~l~---~~----~~~~~--~~~~~~i~~~l~~-------------------~l~~-- 773 (885)
|++|..+. +.+. .. ..... +.++.++..++.. .+..
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 99875432 1111 11 11122 3445555444322 1222
Q ss_pred --Hh-ccCCCCceecCCCCCcEEEcCC----CcEEEeeccCccc
Q 047790 774 --LH-HGFKPYIIHMDIKTSNILLNDY----FEAKVSDFGLARL 810 (885)
Q Consensus 774 --LH-~~~~~~i~H~dlkp~Nil~~~~----~~vkl~Dfg~a~~ 810 (885)
+. ......++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 22 1123568999999999999876 6899999998864
No 437
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.63 E-value=0.0049 Score=68.28 Aligned_cols=70 Identities=17% Similarity=0.231 Sum_probs=47.3
Q ss_pred ceecccCCceEEEEEeCC--------CCeEEEEEecccccccHHHHHHHHHHhcccCCCC-ccceeeeeEeCCeeEEEEe
Q 047790 667 NVIGGGGFRTAFKGTMPD--------QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQN-LVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~--------~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~-i~~~~~~~~~~~~~~lv~e 737 (885)
+.|+.|....+|++...+ ++.+++|+.... .....+..|.++++.+...+ .+++++.+. + .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEE
Confidence 456778888999998653 578888887432 12245668999988886333 356666543 2 38999
Q ss_pred cccCC
Q 047790 738 YMVNG 742 (885)
Q Consensus 738 ~~~~~ 742 (885)
|++|.
T Consensus 153 ~l~G~ 157 (429)
T 1nw1_A 153 YIPSR 157 (429)
T ss_dssp CCCEE
T ss_pred EeCCc
Confidence 99864
No 438
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.63 E-value=0.0094 Score=63.78 Aligned_cols=68 Identities=7% Similarity=0.134 Sum_probs=43.6
Q ss_pred cccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccC---CCCccceeee------eEeCCeeEEEEeccc
Q 047790 670 GGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVK---HQNLVQLLGY------CSVGEEKLLVYEYMV 740 (885)
Q Consensus 670 G~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~---~~~i~~~~~~------~~~~~~~~lv~e~~~ 740 (885)
|.|....||+....+| .+++|+...... ..|.++++.+. -|.|++++.. ....+..+++|+|++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 3444688999987777 899998765431 34555555553 2324454432 234567899999998
Q ss_pred CCCH
Q 047790 741 NGSL 744 (885)
Q Consensus 741 ~~sL 744 (885)
|..+
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8654
No 439
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.62 E-value=0.00044 Score=66.80 Aligned_cols=17 Identities=18% Similarity=0.319 Sum_probs=8.8
Q ss_pred CCCCCcEEEecCCcccc
Q 047790 260 NCSMLKYISLSNNKLSG 276 (885)
Q Consensus 260 ~l~~L~~L~Ls~N~l~~ 276 (885)
..+.|++|+|+.|.|.+
T Consensus 96 ~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 96 TSPSLRVLNVESNFLTP 112 (197)
T ss_dssp HCSSCCEEECCSSBCCH
T ss_pred cCCccCeEecCCCcCCH
Confidence 33455555555555543
No 440
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.60 E-value=0.0059 Score=64.83 Aligned_cols=141 Identities=11% Similarity=0.093 Sum_probs=78.6
Q ss_pred ceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCC--ccceeee------eEeCCeeEEEEec
Q 047790 667 NVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQN--LVQLLGY------CSVGEEKLLVYEY 738 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~--i~~~~~~------~~~~~~~~lv~e~ 738 (885)
+.++.|....+|+....++ .+++|...... ...++..|.++++.+.... +.+++.. ....+..+++|+|
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 4567788889999987655 68889876531 2235566777777664221 3344321 2234667899999
Q ss_pred ccCCCHH-----H------H---Hhhc--C--CC----CC---HHHHHH------------HHHHHHHHHHHHhcc----
Q 047790 739 MVNGSLD-----D------W---LRNR--A--AS----LD---WGKRCK------------IAYGAARGISFLHHG---- 777 (885)
Q Consensus 739 ~~~~sL~-----~------~---l~~~--~--~~----~~---~~~~~~------------i~~~l~~~l~~LH~~---- 777 (885)
++|..+. . . ++.. . .. .. +..... +...+...++.++..
T Consensus 105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~ 184 (322)
T 2ppq_A 105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD 184 (322)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence 9885421 1 0 1110 0 00 01 111000 001133344444321
Q ss_pred CCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 778 ~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
...+++|+|+++.||+++++..+.++||+.+..
T Consensus 185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp SCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred CCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 245799999999999999876568999998754
No 441
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.59 E-value=0.0025 Score=57.41 Aligned_cols=56 Identities=27% Similarity=0.426 Sum_probs=33.2
Q ss_pred eEEccCCcCC-ccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCc
Q 047790 164 SLDFSGNGLN-GTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLS 222 (885)
Q Consensus 164 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~ 222 (885)
.++.+++.++ ..+|..+. ++|++|+|++|+|+ .+|...|..+++|++|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCee
Confidence 4555555554 23443222 34666666666666 666666666667777777766654
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.29 E-value=0.014 Score=64.80 Aligned_cols=72 Identities=14% Similarity=0.116 Sum_probs=45.6
Q ss_pred ceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCc-cceeeeeEeCCeeEEEEecccCCC
Q 047790 667 NVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNL-VQLLGYCSVGEEKLLVYEYMVNGS 743 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~e~~~~~s 743 (885)
+.|+.|-...+|++...+ ++.+++|+....... ..+..+|.++++.+...++ .++++++. + .+||||++|.+
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 456778888999998765 577888887443211 1123678888888875443 56666652 2 35999998743
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.02 E-value=0.0074 Score=65.47 Aligned_cols=72 Identities=14% Similarity=0.124 Sum_probs=42.9
Q ss_pred ceecccCCceEEEEEeCC---------CCeEEEEEecccccccHHHHHHHHHHhcccCCCC-ccceeeeeEeCCeeEEEE
Q 047790 667 NVIGGGGFRTAFKGTMPD---------QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQN-LVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~---------~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~-i~~~~~~~~~~~~~~lv~ 736 (885)
+.++.|....+|++...+ ++.+++|+....... ..+...|.++++.+.... +.++++.. . .++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence 356677778899987654 267888886543211 123467888888776333 44666543 2 36899
Q ss_pred ecccCCC
Q 047790 737 EYMVNGS 743 (885)
Q Consensus 737 e~~~~~s 743 (885)
||++|..
T Consensus 114 e~i~G~~ 120 (369)
T 3c5i_A 114 EWLYGDP 120 (369)
T ss_dssp ECCCSEE
T ss_pred EEecCCc
Confidence 9998753
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.40 E-value=0.04 Score=59.75 Aligned_cols=32 Identities=25% Similarity=0.261 Sum_probs=27.7
Q ss_pred CCCceecCCCCCcEEEcCC------CcEEEeeccCccc
Q 047790 779 KPYIIHMDIKTSNILLNDY------FEAKVSDFGLARL 810 (885)
Q Consensus 779 ~~~i~H~dlkp~Nil~~~~------~~vkl~Dfg~a~~ 810 (885)
...++|+|+.+.||+++++ +.+.++||..|..
T Consensus 243 ~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 243 PVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp CEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred CeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 4568999999999999876 7899999998754
No 445
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.33 E-value=0.076 Score=51.49 Aligned_cols=121 Identities=15% Similarity=0.099 Sum_probs=78.5
Q ss_pred CHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCC
Q 047790 743 SLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT 822 (885)
Q Consensus 743 sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~ 822 (885)
+|.++++..+.+++++++++++.|.+.++...-. ++.-..+=+.|..|++..+|.|...+ ..+.
T Consensus 34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------- 97 (229)
T 2yle_A 34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------- 97 (229)
T ss_dssp EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc-------------
Confidence 8999999999999999999999999999887721 11112333456889999998887664 1110
Q ss_pred CCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHH
Q 047790 823 ADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVLLMM 882 (885)
Q Consensus 823 ~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~~~~~~~l~~~~~~~~ 882 (885)
.....+.|||... ...+.+.-|||+|+++|..+-...|-+. +.+-...+-+.+..|-
T Consensus 98 ~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~e--E~eLS~~LE~LL~~Mt 154 (229)
T 2yle_A 98 AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKENE--ERELSPPLEQLIDHMA 154 (229)
T ss_dssp ---------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTTE--EECCCHHHHHHHHHHT
T ss_pred ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCccc--chhhCHHHHHHHHHHH
Confidence 1223456888753 4456788999999999999987777431 2223345555555553
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.96 E-value=0.047 Score=59.83 Aligned_cols=71 Identities=7% Similarity=0.051 Sum_probs=45.4
Q ss_pred eecccCCceEEEEEeCC--------CCeEEEEEecccccccHHHHHHHHHHhcccCC-CCccceeeeeEeCCeeEEEEec
Q 047790 668 VIGGGGFRTAFKGTMPD--------QKTVAVKKLSQATGQCDREFAAEMETLDMVKH-QNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 668 ~lG~G~~g~vy~a~~~~--------~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
.+..|....+|+....+ ++.+++++..... ....+..+|.++++.+.. .-..++++.+ . .++||||
T Consensus 77 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~ef 151 (424)
T 3mes_A 77 QIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEEF 151 (424)
T ss_dssp EECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEEC
T ss_pred EcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEEE
Confidence 45567778888887653 5778888864332 222234678888888753 3345555433 2 3789999
Q ss_pred ccCCC
Q 047790 739 MVNGS 743 (885)
Q Consensus 739 ~~~~s 743 (885)
++|..
T Consensus 152 I~G~~ 156 (424)
T 3mes_A 152 IDGEP 156 (424)
T ss_dssp CCSEE
T ss_pred eCCcc
Confidence 98864
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=89.51 E-value=1 Score=48.88 Aligned_cols=30 Identities=27% Similarity=0.369 Sum_probs=25.2
Q ss_pred CceecCCCCCcEEE------cCCCcEEEeeccCccc
Q 047790 781 YIIHMDIKTSNILL------NDYFEAKVSDFGLARL 810 (885)
Q Consensus 781 ~i~H~dlkp~Nil~------~~~~~vkl~Dfg~a~~ 810 (885)
.++|+|+.+.||++ ++...++++||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 36799999999999 3456799999999864
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=68.44 E-value=11 Score=36.45 Aligned_cols=115 Identities=7% Similarity=0.082 Sum_probs=75.0
Q ss_pred CCCCccceeeeeEeCCeeEEEEeccc-CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEE
Q 047790 715 KHQNLVQLLGYCSVGEEKLLVYEYMV-NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNIL 793 (885)
Q Consensus 715 ~~~~i~~~~~~~~~~~~~~lv~e~~~-~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil 793 (885)
.+|+.++. .+...++...+.++.-+ +.++.. ++ ..+....++++..++....+++ .=+|--+.|+|++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik----~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~NL~ 111 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK----SFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPDELF 111 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG----GSCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGGGEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH----hcCHHHHHHHHHHHHHHHHHhc-----CceEEEEecceEE
Confidence 57888877 56666666666655443 234444 22 2677888999999888775554 2367789999999
Q ss_pred EcCCCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 794 LNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 794 ~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
++.++.++++-.|....+.+ . ..+...-.-..=+++..+++++..|.
T Consensus 112 f~~~~~p~i~~RGik~~l~P------------------~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 112 FTRDGLPIAKTRGLQNVVDP------------------L-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp ECTTSCEEESCCEETTTBSC------------------C-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EcCCCCEEEEEccCccCCCC------------------C-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999987665332221 1 11222233346677788888888775
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=57.64 E-value=29 Score=33.55 Aligned_cols=82 Identities=11% Similarity=0.048 Sum_probs=57.1
Q ss_pred CCCCccceeeeeEeCCeeEEEEecccC-CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHH-HHhccCCCCceecCCCCCcE
Q 047790 715 KHQNLVQLLGYCSVGEEKLLVYEYMVN-GSLDDWLRNRAASLDWGKRCKIAYGAARGIS-FLHHGFKPYIIHMDIKTSNI 792 (885)
Q Consensus 715 ~~~~i~~~~~~~~~~~~~~lv~e~~~~-~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~-~LH~~~~~~i~H~dlkp~Ni 792 (885)
.||+. -..+..+++...+.++.-++ .++..+ +. .+....++++..++.... +++ .-+|--+.|+|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i-~~----~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI-RK----TTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENL 115 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH-HT----SCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH-Hh----cCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceE
Confidence 57777 44445666777666665433 355544 22 677788888888776655 333 457778999999
Q ss_pred EEcCCCcEEEeeccCc
Q 047790 793 LLNDYFEAKVSDFGLA 808 (885)
Q Consensus 793 l~~~~~~vkl~Dfg~a 808 (885)
+++.++.+++.-.|.-
T Consensus 116 ~f~~~~~p~i~hRGi~ 131 (219)
T 4ano_A 116 MFNRALEPFFLHVGVK 131 (219)
T ss_dssp EECTTCCEEESCCEET
T ss_pred EEeCCCcEEEEEcCCc
Confidence 9999999999977754
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=56.21 E-value=1.7 Score=48.14 Aligned_cols=62 Identities=6% Similarity=-0.015 Sum_probs=18.9
Q ss_pred eecceecccCCceEEEEEeCC-CCeEEE------EEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEe
Q 047790 664 VFENVIGGGGFRTAFKGTMPD-QKTVAV------KKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSV 728 (885)
Q Consensus 664 ~~~~~lG~G~~g~vy~a~~~~-~~~val------K~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~ 728 (885)
.+.+.+| ||.||+|.+.. ..+||+ |..+.... .....+.+|..+++..+|||+++.+.+...
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 4566777 99999998754 356777 65543221 122457788899999999999999887653
No 451
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=46.20 E-value=39 Score=27.98 Aligned_cols=45 Identities=16% Similarity=0.203 Sum_probs=24.1
Q ss_pred CCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeec
Q 047790 172 LNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSN 218 (885)
Q Consensus 172 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~ 218 (885)
++.+...+|.++++|+.+.+-.+ ++ .|...+|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~-~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IG-LLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SS-CCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hh-eEcHHHHhccCCccEEEEcC
Confidence 33344455555566665555543 33 45555566666666665554
No 452
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=33.28 E-value=4.8e+02 Score=29.92 Aligned_cols=25 Identities=28% Similarity=0.206 Sum_probs=23.0
Q ss_pred cCCCCCcEEEcCCCcEEEeeccCcc
Q 047790 785 MDIKTSNILLNDYFEAKVSDFGLAR 809 (885)
Q Consensus 785 ~dlkp~Nil~~~~~~vkl~Dfg~a~ 809 (885)
||=.++||+++..|++.=+|||...
T Consensus 551 GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 551 GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred CCCCCcceEEeCCCCEEEEeehhhh
Confidence 5889999999999999999999874
No 453
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=32.59 E-value=1.6e+02 Score=30.30 Aligned_cols=140 Identities=11% Similarity=0.019 Sum_probs=70.5
Q ss_pred ecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeee-------------e-----
Q 047790 665 FENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGY-------------C----- 726 (885)
Q Consensus 665 ~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~-------------~----- 726 (885)
..+..-.|..| ||.+.. ++..+++|... ....+.+..++...-.+.-|...-+... +
T Consensus 73 ~I~~s~~Gstg-vff~~t-d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~ 147 (342)
T 1cja_A 73 GIERSEKGTEG-LFFVET-ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFR 147 (342)
T ss_dssp EEEECCSTTSC-EEEEEE-SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSC
T ss_pred EEEeccCCCCC-eEEEEe-CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhH
Confidence 34555556555 444443 57788899542 2233445555554444555553222211 0
Q ss_pred ----EeCCeeEEEEecccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCC-ce-ecCCCCCcEEEcCCC-
Q 047790 727 ----SVGEEKLLVYEYMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPY-II-HMDIKTSNILLNDYF- 798 (885)
Q Consensus 727 ----~~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~-i~-H~dlkp~Nil~~~~~- 798 (885)
...+..+++|+|.+|..+...-... ...+.......+.. .-++.......++- .+ +..=.+.||+++.++
T Consensus 148 ~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~~~k~LG~--Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~ 225 (342)
T 1cja_A 148 VITTLANQANILLMELVRGITLNKLTTTSAPEVLTKSTMQQLGS--LMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGA 225 (342)
T ss_dssp HHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHHHHHHHHH--HHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTT
T ss_pred HHHHhhcccceehhhhcCCCccccchhhhhhhhcCHHHHHhhch--hheehhhhcCCccCcccccCCCChhheEEeCCCC
Confidence 0123456999999876554321110 00023333222222 22455555443333 11 123578899997654
Q ss_pred cEEEeeccCcccc
Q 047790 799 EAKVSDFGLARLI 811 (885)
Q Consensus 799 ~vkl~Dfg~a~~~ 811 (885)
.+.++|-+.+...
T Consensus 226 ~~~~IDhn~af~~ 238 (342)
T 1cja_A 226 TVVPIDSKIIPLD 238 (342)
T ss_dssp CEEECSCCCCCCC
T ss_pred eEEEEcCCccccC
Confidence 4889998888653
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=26.24 E-value=76 Score=26.17 Aligned_cols=42 Identities=14% Similarity=0.108 Sum_probs=20.9
Q ss_pred CCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccc
Q 047790 151 EMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSD 193 (885)
Q Consensus 151 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 193 (885)
+-..+|.++.+|+.+.+-.+ ++.+...+|.++.+|+.+.+..
T Consensus 11 I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp SCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33344555555555555443 2324445555555555555543
No 455
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=24.47 E-value=7.9e+02 Score=27.60 Aligned_cols=25 Identities=28% Similarity=0.206 Sum_probs=22.7
Q ss_pred cCCCCCcEEEcCCCcEEEeeccCcc
Q 047790 785 MDIKTSNILLNDYFEAKVSDFGLAR 809 (885)
Q Consensus 785 ~dlkp~Nil~~~~~~vkl~Dfg~a~ 809 (885)
||=.++||+++..|++.=+|||...
T Consensus 477 gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 477 GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred cCCCCcceeEcCCCCEeeeehHHhh
Confidence 5888999999999999999999874
Done!