BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>047792
MNSSAFQWLRTLLISFFLTAFCLNSFLSSATQISYSDHCNSIVPESTLNKFEPALSSFPR
LHTGYYTGGDEILSQNAYSLTFRTPNVYKTEKDGVFGIEGTLLLRSRNTYSSDGGVTYVQ
VAKSYDPGAISHEPGVRRRRSLVRFRLHGFWSESSGNLCMVGTEDELPNLAAVLKLSNLK
NSSVVTTLVSGRLECMSSANDLNYFEPISILIPPRMSYEYSLASKDLSNEFSGGNDTVKC
LPLSSLPRTSFCSVVLGGNEFNLKYSSNCSSANICSPFSDSTDGYFPRVVSLKQIECLEE
EKRLRVLVEFPNSSYVGYYHPFDPNRTLVAEGYWDDKMNKLFIVACRFLNSAESLANAYI
GDCTTRLSLSFPSIWSIRQSRNIVGEIWSKKAVSDSGYFEKIHFQNSENSFRTVSGLKYE
YSEINRARELCWPKWKPQKSNGKKYPSEHSYDMQFNIRVHRPNANSSRGYATPLSAGDQF
YPRYLYSKTPLSSSTSRPTVQESFNRNSQVNISYKIGIRLLPGATFGGQVYSLDISRSSY
SGVEISAEGIYDSKTGQLCMVGCRSIVSNNLSSTSDSMDCEILLNFQFPPSNPKENEDHI
KGSIKSMRAESDPLYFEPMEVYSVSYSALAVKKSISKMDWEITVALISNTLACIFVGLQL
LHVKKHPEVLPSISLFMLLLLTLGHMIPLMLNFEALFLKNLDRPRVLLSRGGWLEVNEVL
VRIITMVAFLLEFRLLQLSWSAKLADGQDQPGLWLAEKRSLFVSFSLYAPGAIIFYLFNW
REHNHYLGFLSSPQRFYPQPQRWEGLKLYTVFVLDGFLLPQILFNIFRNSKDNALASSFY
IGVTSLRLLPHAYHALHTNADYFSDACNIIVSVGGMMFAAVIFLQQLFGGCCNDRKKFID
GQAYEKVSIVSET

High Scoring Gene Products

Symbol, full name Information P value
AT4G21700 protein from Arabidopsis thaliana 2.5e-120
AT1G52780 protein from Arabidopsis thaliana 2.7e-22

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  047792
        (913 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2119078 - symbol:AT4G21700 "AT4G21700" species...  1184  2.5e-120  1
TAIR|locus:2011566 - symbol:AT1G52780 "AT1G52780" species...   246  2.7e-22   3


>TAIR|locus:2119078 [details] [associations]
            symbol:AT4G21700 "AT4G21700" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0005768 "endosome"
            evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
            [GO:0005802 "trans-Golgi network" evidence=IDA] GO:GO:0005794
            GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005768
            GO:GO:0005802 EMBL:AL161555 EMBL:AL035527 InterPro:IPR021319
            Pfam:PF11145 IPI:IPI00548541 PIR:T05845 RefSeq:NP_193901.1
            UniGene:At.54462 PRIDE:Q9SVS7 EnsemblPlants:AT4G21700.1
            GeneID:828257 KEGG:ath:AT4G21700 TAIR:At4g21700 eggNOG:NOG246009
            HOGENOM:HOG000238166 InParanoid:Q9SVS7 OMA:YSTAWDI PhylomeDB:Q9SVS7
            ProtClustDB:CLSN2915923 ArrayExpress:Q9SVS7 Genevestigator:Q9SVS7
            Uniprot:Q9SVS7
        Length = 962

 Score = 1184 (421.8 bits), Expect = 2.5e-120, P = 2.5e-120
 Identities = 329/939 (35%), Positives = 474/939 (50%)

Query:    24 NSFLSSATQISYSDHCNSIVPESTLNKFEPALSSFPRL--HTGYYTGGD----EILSQNA 77
             +SF+  A +I YSDHCN IVPES ++    A+ S   L     +++GGD       SQN 
Sbjct:    48 HSFI--APRIPYSDHCNHIVPESPIDPSPSAVFSHASLAFDVSFFSGGDLFFNRFQSQNG 105

Query:    78 --YSLTFRTPNVYKTEKDG-VFGIEGTLLLRSRNTYSSDG--GVTYVQVAKSYDPGAISH 132
                S  FR  ++ KT  DG ++ +E  L L+   T +S    G  + Q  K      I  
Sbjct:   106 DVKSARFRPKSIRKTLGDGKIYKVEAKLTLQISKTSASSSYYGGDFGQ--KKLQVMQIDG 163

Query:   133 EPGXXXXXXXXXXXXHGFWSESSGNLCMVGTED-------ELPNLAAVLKLSNLKNSSVV 185
                            +GFWSES+G +CMVG+          L    A L L+  K S++ 
Sbjct:   164 R----SSWGGASFDFYGFWSESTGQVCMVGSTQVLSVEGTRLKIFDARLMLNYSKESNIY 219

Query:   186 TTLVSGRLECMSSANDLNYFEPISILIPPR--MSYEYSLASKD-LSNEFSGGNDTVKCLP 242
              +LV G LE   S + L+ F+ + IL      ++YEY L  +  L    +GG      L 
Sbjct:   220 GSLVKGVLE---SVDSLSEFKTVLILGARNTPLNYEYKLLEQSKLDCGVNGGES----LS 272

Query:   243 LSSLPRTSFCSVVLGGNE-FNLKYSSNCSSANICSPFSDSTDGYFPRVVSLKQIXXXXXX 301
             L ++     C V  G +  F L Y ++C   + CSPF    + Y P  +S+  +      
Sbjct:   273 LENV-LGGMCKVFEGRSHVFGLMYRNDCGVDHSCSPFGSDVE-YTPGFMSM--LSFLCDG 328

Query:   302 XXXXXXXXFPNSSYVGYYHPFDPNRTLVAEGYWDDKMNKLFIVACRFLNSAESLANAYIG 361
                     F N S      PFDP  +LVAEG WD + N+   VACR LN ++SL+NA + 
Sbjct:   329 EKMRMLLSFSNMSGYSSLFPFDPRTSLVAEGSWDVERNRFCGVACRILNFSDSLSNAVVD 388

Query:   362 DCTTRLSLSFPSIWSIRQSRNIVGEIWSKKAVSDSGYFEKIHFQNSENSFRTVSGLKYEY 421
             DC+ RLSL FP+I SI+    +VGE+WS +A SD  YF +I F +  +       L+YEY
Sbjct:   389 DCSLRLSLRFPAILSIKSMAPVVGELWSAQAESDPSYFRRIEFSSLNDQLWRFPSLRYEY 448

Query:   422 SEINRARELCWP-KWKPQKSNGKKYPSEHSYDMQFNIRV-HRPNANSSR-GYATPLSAGD 478
             +E  R  +LC   K +P K  G  YP   + DM+F + V +    N  R   A+P   GD
Sbjct:   449 TESERVGKLCGAGKSRP-KRKGNHYPDAQTSDMRFVMSVKYSGEGNVLRTARASPYFVGD 507

Query:   479 QFYPRYLYSKTPLSSSTSRPTVQESFNRNSQVNISYKIGIRLLPGATFGGQVYSLDISRS 538
             + Y R L  +      T  P    S  + S  NI+Y+I   L P +   G +Y       
Sbjct:   508 RLY-RDLLVRGQGVGLTGIPMNVNSVTK-SFTNITYRIR-SLNPNSESRGDIY------- 557

Query:   539 SYSGVEISAEGIYDSKTGQLCMVGCRSI-VSNNLSSTSDSMDCEILLNFQFPPSNPKENE 597
                     AEG YD  TG+LCMVGC+S+ + N ++  ++++DC + +   F P + + ++
Sbjct:   558 --------AEGTYDRDTGELCMVGCQSVRLKNTVAIQNETVDCSLAIKINFSPIDSR-SD 608

Query:   598 DHIKGSIKSMRAESDPLYFEPMEVYSVSYSALAVKKSISKMDWEITVALISNTLACIFVG 657
             D +KG+IKS R ++DPLY   MEV S S      K+S+ +MD E+ + L+SNTL+C+F+G
Sbjct:   609 DRLKGTIKSTREKTDPLYVGRMEVLSRSIYVHQAKESVWRMDLEVAMVLVSNTLSCLFLG 668

Query:   658 LQLLHVKKHPEVXXXXXXXXXXXXXXXXXXXXXXNFEALFLKNLDRPRVLLSRGGWLEVN 717
             +QL H+K+H E                       NFE LF  + ++  +      WLE  
Sbjct:   669 MQLYHMKQHQEALPFISVAMLILITLGHMIPLLLNFEELFKGSHNQRNLFFENDRWLEAK 728

Query:   718 EVLVRIITMVAFLLEFRLLQLSWSA-KLADGQDQPGLWLAEKRSLFVSFSLYAPGAIIFY 776
             E++VRI+T++AFLLE RLLQL+W+A K  D   +  +W AEK+  +V   LY  G +I +
Sbjct:   729 EIVVRIVTLIAFLLECRLLQLAWTARKTGDHHHREDVWKAEKKVSYVCLPLYITGGLIAW 788

Query:   777 LFNWREHNHYLGFLSSPQ------------RFYPQPQRWEGLKLYTVFVLDGFLLPQILF 824
             L N       + ++  PQ            R + +P  W+ LK Y   +LD FLLPQILF
Sbjct:   789 LVNRNRTPKRIVYIGKPQARNLLYRPVNLKRSFQRPPLWKDLKSYGGLMLDAFLLPQILF 848

Query:   825 NIFRNSKDNALASSFYIGVTSLRLLPHAY-----HA---------LHTN--ADYFSDACN 868
             N F NS    LA+ FY+G + +RLLPHAY     H+         ++ N   DY+S A +
Sbjct:   849 NGFSNSDLKPLAALFYVGNSFVRLLPHAYDLYRSHSYGKILDWSFIYANHKMDYYSTAWD 908

Query:   869 IIVSVGGMMFAAVIFLQQLFGGCCNDRKKFIDGQAYEKV 907
             II+   G +FA +IFLQQ FGG C   K+F +   YEKV
Sbjct:   909 IIILCIGFLFAFLIFLQQRFGGRCFIPKRFREYVGYEKV 947


>TAIR|locus:2011566 [details] [associations]
            symbol:AT1G52780 "AT1G52780" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0016020 "membrane"
            evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005794
            "Golgi apparatus" evidence=IDA] [GO:0005802 "trans-Golgi network"
            evidence=IDA] EMBL:CP002684 GO:GO:0005794 GO:GO:0016020
            GO:GO:0005768 GO:GO:0005802 IPI:IPI00545810 RefSeq:NP_175687.2
            UniGene:At.28086 PRIDE:F4IEK8 EnsemblPlants:AT1G52780.1
            GeneID:841711 KEGG:ath:AT1G52780 OMA:YRRQRED InterPro:IPR021319
            Pfam:PF11145 Uniprot:F4IEK8
        Length = 1059

 Score = 246 (91.7 bits), Expect = 2.7e-22, Sum P(3) = 2.7e-22
 Identities = 89/327 (27%), Positives = 148/327 (45%)

Query:   548 EGIYDSKTGQLCMVGCRSIVSN--NLSSTSD---SMDCEILLNFQFPPSNPKENEDHI-K 601
             EG+YD   G++ +VGCR + ++   L  + D    +DC I +   +PP   +   D   K
Sbjct:   641 EGLYDEHVGKMYLVGCRDVRASWKILFESPDLEAGLDCLIDVVVSYPPIKSRWLADPTAK 700

Query:   602 GSIKSMRAESDPLYFEPMEVYSVSYSALAVKKSI-SKMDWE--ITVALISNTLACIFVGL 658
              SI S R E DPLYF+P+++ +        ++ I S+   E  + V  ++ ++ CI   L
Sbjct:   701 VSISSNRPEDDPLYFKPIKLKTTPIFYRRQREDILSRAGVEGILRVLTLTFSIGCI-TSL 759

Query:   659 QLLHVKKHPEVXXXXXXXXXXXXXXXXXXXXXXNFEALFLKNL------DRPRVLLSRGG 712
              L +V  + +                         EALF +        + P   L R  
Sbjct:   760 -LFYVSSNTDSLPFVSLVMLGVQALGYSLPLITGAEALFKRKAASATTYETPSYDLQRSQ 818

Query:   713 WLEVNEVLVRIITMVAFLLEFRLLQLSWSAK---LADGQDQPGLWLAEKRSLFVSFSLYA 769
             W  V +  V+++ MV FLL  RL Q  W ++   L     +P    +++R L V   L+A
Sbjct:   819 WFNVIDYTVKLLVMVCFLLTLRLCQKVWKSRARLLTRTPQEPHKVPSDRRVLLVVLILHA 878

Query:   770 PGAIIFYLFNWREHNHYLG--FLSSPQRFYPQPQRWEGLKLYTVFVLDGFLLPQILFN-I 826
              G I+  + +    +  +G  + S+   ++ Q +  E    Y   V D FLLPQ++ N +
Sbjct:   879 LGYIVALIRHPARADRLVGGSYGSNASNWW-QTETEE----YIGLVQDFFLLPQVIANAM 933

Query:   827 FRNSKDNALASSFYIGVTSLRLLPHAY 853
             ++      L   +Y G+T +RL PHAY
Sbjct:   934 WQIDSRQPLRKLYYFGITLVRLFPHAY 960

 Score = 94 (38.1 bits), Expect = 2.7e-22, Sum P(3) = 2.7e-22
 Identities = 35/126 (27%), Positives = 58/126 (46%)

Query:   311 PNSS-YVGYYHPFDPNRTLVAEGYWDDKMNKLFIVACRFLNSAESLANAYIGDCTTRLSL 369
             PN + Y+        N T+ AEG W     +L +V CR            +  C  R+ L
Sbjct:   401 PNENLYISGMRSGIDNMTVTAEGIWKPSSGQLCMVGCR---------RGQVDGCNARICL 451

Query:   370 SFPSIWSIRQSRNIVGE---IWSKKAVSDSGY---FEK-IHFQNSENSFRT-VSGLKYEY 421
               P+ +SIRQ   +VG    + ++K ++ S +   FEK +   + +N F +  S   Y Y
Sbjct:   452 YIPTTFSIRQRSILVGTFSCLNTEKNLTPSFFPLSFEKLVEPMDMQNYFHSSASHPFYSY 511

Query:   422 SEINRA 427
             S+++ A
Sbjct:   512 SKLDDA 517

 Score = 85 (35.0 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
 Identities = 15/28 (53%), Positives = 20/28 (71%)

Query:   537 RSSYSGVEISAEGIYDSKTGQLCMVGCR 564
             RS    + ++AEGI+   +GQLCMVGCR
Sbjct:   411 RSGIDNMTVTAEGIWKPSSGQLCMVGCR 438

 Score = 75 (31.5 bits), Expect = 2.4e-20, Sum P(3) = 2.4e-20
 Identities = 32/122 (26%), Positives = 50/122 (40%)

Query:   111 SSDGGVTYVQ-VAKSYDPGAISHEPGXXXXXXXXXXXXHGFWSESSGNLCMVGTE-DELP 168
             S    VT V  V ++  P    +  G             G W  SSG LCMVG    ++ 
Sbjct:   384 SQSDAVTKVSAVFRAVHPNENLYISGMRSGIDNMTVTAEGIWKPSSGQLCMVGCRRGQVD 443

Query:   169 NLAAVLKLSNLKNSSV-VTTLVSGRLECMSSANDLN-YFEPISI--LIPPR--MSYEYSL 222
                A + L      S+   +++ G   C+++  +L   F P+S   L+ P    +Y +S 
Sbjct:   444 GCNARICLYIPTTFSIRQRSILVGTFSCLNTEKNLTPSFFPLSFEKLVEPMDMQNYFHSS 503

Query:   223 AS 224
             AS
Sbjct:   504 AS 505

 Score = 57 (25.1 bits), Expect = 2.7e-22, Sum P(3) = 2.7e-22
 Identities = 13/52 (25%), Positives = 27/52 (51%)

Query:   836 ASSFYIG-VTSLRLLPHAYHALHTNADYFSDACNIIVSVGGMMFAAVIFLQQ 886
             A  + +G V     +   +  ++ N D+FS   +I + V  ++ A ++F+QQ
Sbjct:   959 AYDYIVGSVPDPYFIGEEHEFVNPNFDFFSKFGDIAIPVTAILLAVIVFVQQ 1010


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.134   0.405    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      913       865   0.00084  122 3  11 22  0.39    34
                                                     37  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  630 (67 KB)
  Total size of DFA:  451 KB (2212 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  67.16u 0.11s 67.27t   Elapsed:  00:00:03
  Total cpu time:  67.16u 0.11s 67.27t   Elapsed:  00:00:03
  Start:  Thu May  9 18:24:21 2013   End:  Thu May  9 18:24:24 2013

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