Query 047792
Match_columns 913
No_of_seqs 139 out of 152
Neff 5.1
Searched_HMMs 13730
Date Mon Mar 25 05:01:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047792.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/047792hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2gtlo1 b.61.7.1 (O:101-222) E 11.8 1.7E+02 0.012 25.5 6.0 40 93-160 39-78 (122)
2 d1dqva2 b.7.1.2 (A:425-569) Sy 9.2 1.5E+02 0.011 25.3 4.6 18 550-567 14-33 (145)
3 d2bwqa1 b.7.1.2 (A:729-853) Re 8.9 3.6E+02 0.026 21.8 7.1 40 544-590 4-45 (125)
4 d2cm5a1 b.7.1.2 (A:541-677) C2 7.9 2.9E+02 0.021 22.7 6.1 64 550-622 9-74 (137)
5 d1wuba_ b.61.6.1 (A:) Polyisop 6.9 1.4E+02 0.01 26.7 3.5 38 69-107 68-106 (176)
6 d1y0ga_ b.61.6.1 (A:) Lipid bi 6.6 1.5E+02 0.011 26.4 3.5 37 69-107 71-108 (169)
7 d1w15a_ b.7.1.2 (A:) Synaptota 5.1 3.3E+02 0.024 22.6 4.7 34 550-586 9-44 (138)
8 d2gtln1 b.61.7.1 (N:102-229) E 5.0 2.9E+02 0.021 24.2 4.2 38 93-158 41-78 (128)
9 d1dzla_ b.121.6.1 (A:) Papillo 4.8 1.1E+02 0.0077 32.2 1.2 16 551-566 130-145 (455)
10 d1dqva1 b.7.1.2 (A:295-424) Sy 4.7 7.2E+02 0.053 20.0 6.8 67 542-622 6-75 (130)
No 1
>d2gtlo1 b.61.7.1 (O:101-222) Extracellular hemoglobin linker l3 subunit {Common earthworm (Lumbricus terrestris) [TaxId: 6398]}
Probab=11.80 E-value=1.7e+02 Score=25.52 Aligned_cols=40 Identities=15% Similarity=0.167 Sum_probs=29.2
Q ss_pred CcEEEEEEEEEEEecccccCCCCceeeecccccCCCCCCCCCCccccceeEEEEEeeeeecCCCceec
Q 047792 93 DGVFGIEGTLLLRSRNTYSSDGGVTYVQVAKSYDPGAISHEPGVRRRRSLVRFRLHGFWSESSGNLCM 160 (913)
Q Consensus 93 ~~v~~v~atl~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lsf~l~G~ysessg~LCM 160 (913)
|...+|.|+|.++-.+- -..++.+..++|||+-.+-+|=|
T Consensus 39 ~s~~~v~a~v~~~~~~~----------------------------g~~~~~s~~~~G~Y~~g~~~L~l 78 (122)
T d2gtlo1 39 TPIADLHVHIEIESETD----------------------------EDESEVSMPADGEYSFADHRLTI 78 (122)
T ss_dssp TTEEEEEEEEEEECCCS----------------------------SCCCEEEEEEEEEEETTTTEEEE
T ss_pred CccceEEEEEEEEEecC----------------------------CceEEEEeeeeEEEeccceEEEE
Confidence 57889999999974422 12678899999999986654443
No 2
>d1dqva2 b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=9.19 E-value=1.5e+02 Score=25.25 Aligned_cols=18 Identities=17% Similarity=0.338 Sum_probs=15.2
Q ss_pred EEeCCCCeEEE--Eeecccc
Q 047792 550 IYDSKTGQLCM--VGCRSIV 567 (913)
Q Consensus 550 VYD~~tG~LCM--VGCR~v~ 567 (913)
-|||.+|+|++ +.||++.
T Consensus 14 ~Y~~~~~~L~V~V~~a~nL~ 33 (145)
T d1dqva2 14 CYLPTAGLLTVTIIKASNLK 33 (145)
T ss_dssp EEETTTTEEEEEEEEEESCC
T ss_pred EEcCCCCEEEEEEEEEeCCC
Confidence 58999999987 7888883
No 3
>d2bwqa1 b.7.1.2 (A:729-853) Regulating synaptic membrane exocytosis protein, rim2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.89 E-value=3.6e+02 Score=21.83 Aligned_cols=40 Identities=23% Similarity=0.339 Sum_probs=26.8
Q ss_pred eEEEEEEEeCCCCeEEE--EeecccccCCCCCCCCCCCcceEEEEEeCC
Q 047792 544 EISAEGIYDSKTGQLCM--VGCRSIVSNNLSSTSDSMDCEILLNFQFPP 590 (913)
Q Consensus 544 ~IsAEGVYD~~tG~LCM--VGCR~v~s~~~~~~~~~~DC~I~V~l~fP~ 590 (913)
.|+.+ ||+.+++|.. +.||++... +....|+--|++++-|
T Consensus 4 ~l~l~--y~~~~~~L~V~V~~a~~L~~~-----~~~~~~dpyVkv~l~~ 45 (125)
T d2bwqa1 4 SIKLW--FDKVGHQLIVTILGAKDLPSR-----EDGRPRNPYVKIYFLP 45 (125)
T ss_dssp EEEEE--EETTTTEEEEEEEEEESCCCC-----TTSCCBCEEEEEEEES
T ss_pred EEEEE--EECCCCEEEEEEEEeECCCCc-----CCCCCCCEEEEEEEeC
Confidence 45555 9999999987 888888421 3345666666666633
No 4
>d2cm5a1 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=7.93 E-value=2.9e+02 Score=22.66 Aligned_cols=64 Identities=16% Similarity=0.258 Sum_probs=33.2
Q ss_pred EEeCCCCeEEE--EeecccccCCCCCCCCCCCcceEEEEEeCCCCCCCCCceEEEEEEecCCCCCCCcccceeee
Q 047792 550 IYDSKTGQLCM--VGCRSIVSNNLSSTSDSMDCEILLNFQFPPSNPKENEDHIKGSIKSMRAESDPLYFEPMEVY 622 (913)
Q Consensus 550 VYD~~tG~LCM--VGCR~v~s~~~~~~~~~~DC~I~V~l~fP~~~s~r~~~~i~G~I~S~R~~~DPL~F~~l~l~ 622 (913)
-|++++|+|.. +.||++... +..+..|+-+.|++. +-. . ...+-+=...++..+|.+=+.+.+.
T Consensus 9 ~Y~~~~~~L~V~v~~a~nL~~~---~~~~~~dpyv~v~l~--~~~-~---~~~~~kT~v~~~t~~P~wne~f~f~ 74 (137)
T d2cm5a1 9 MYSTQQGGLIVGIIRCVHLAAM---DANGYSDPFVKLWLK--PDM-G---KKAKHKTQIKKKTLNPEFNEEFFYD 74 (137)
T ss_dssp EEETTTTEEEEEEEEEESCCCC---STTSCCCEEEEEEEE--TC-------CCEEECCCCCSCSSCEEEEEEEEE
T ss_pred EEECCCCEEEEEEEEEECCCCC---CCCCCcCeEEEEEEE--cCC-c---cceeecCEeEcCCCCCccceEEEEE
Confidence 48899999876 778877321 112234555555543 222 1 1111121222345579887776665
No 5
>d1wuba_ b.61.6.1 (A:) Polyisoprenoid-binding protein TTHA0802 (TT1927B) {Thermus thermophilus [TaxId: 274]}
Probab=6.92 E-value=1.4e+02 Score=26.72 Aligned_cols=38 Identities=16% Similarity=0.304 Sum_probs=26.4
Q ss_pred CCcccCCC-CceeEeecCceeecCCCcEEEEEEEEEEEec
Q 047792 69 GDEILSQN-AYSLTFRTPNVYKTEKDGVFGIEGTLLLRSR 107 (913)
Q Consensus 69 G~~~f~~~-~~s~sf~~~~v~~T~~~~v~~v~atl~l~~~ 107 (913)
+.++|+.. ++-.+|...++..+. ++-+.|+|+|||+|-
T Consensus 68 s~dffd~~~~P~~~F~st~i~~~~-~~~~~v~G~LTi~Gv 106 (176)
T d1wuba_ 68 SADFLHAEQYPEIRFVSTQIEPLG-GNRYRIQGNLTIRDI 106 (176)
T ss_dssp STTTTCTTTCCEEEEEEEEEEEEE-TTEEEEEEEEEETTE
T ss_pred ccceeecccCCceEEEEEEEEEec-CCeEEEEEEEEECcc
Confidence 44566553 344778777776654 456899999999874
No 6
>d1y0ga_ b.61.6.1 (A:) Lipid binding protein YceI {Escherichia coli [TaxId: 562]}
Probab=6.64 E-value=1.5e+02 Score=26.45 Aligned_cols=37 Identities=24% Similarity=0.351 Sum_probs=26.0
Q ss_pred CCcccCCC-CceeEeecCceeecCCCcEEEEEEEEEEEec
Q 047792 69 GDEILSQN-AYSLTFRTPNVYKTEKDGVFGIEGTLLLRSR 107 (913)
Q Consensus 69 G~~~f~~~-~~s~sf~~~~v~~T~~~~v~~v~atl~l~~~ 107 (913)
++++|+.. ++-..|...++..+.+. ++|+|+||++|-
T Consensus 71 ~~dffd~~~~P~i~F~s~~v~~~~~~--~~v~G~Lti~Gv 108 (169)
T d1y0ga_ 71 SADFLNTAKYPQATFTSTSVKKDGDE--LDITGDLTLNGV 108 (169)
T ss_dssp STTTTCTTTCCEEEEEEEEEEEETTE--EEEEEEEEETTE
T ss_pred ccceeEcccCceEEEEEEEEEecCCe--EEEEEEEEEEeE
Confidence 34455553 34478888888876653 789999999874
No 7
>d1w15a_ b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=5.10 E-value=3.3e+02 Score=22.63 Aligned_cols=34 Identities=24% Similarity=0.319 Sum_probs=19.8
Q ss_pred EEeCCCCeEEE--EeecccccCCCCCCCCCCCcceEEEE
Q 047792 550 IYDSKTGQLCM--VGCRSIVSNNLSSTSDSMDCEILLNF 586 (913)
Q Consensus 550 VYD~~tG~LCM--VGCR~v~s~~~~~~~~~~DC~I~V~l 586 (913)
-|+|.+|+|++ +.|+++... +..+..||=+.|.+
T Consensus 9 ~Y~~~~~~L~V~v~~a~~L~~~---~~~~~~dpyvkv~l 44 (138)
T d1w15a_ 9 CYQSTTNTLTVVVLKARHLPKS---DVSGLSDPYVKVNL 44 (138)
T ss_dssp EEETTTTEEEEEEEEEESCC---------CCCEEEEEEE
T ss_pred EEcCCCCEEEEEEEEeECCCCC---CCCCCcCEEEEEEE
Confidence 48999999886 678887321 11223455555555
No 8
>d2gtln1 b.61.7.1 (N:102-229) Extracellular hemoglobin linker l2 subunit {Common earthworm (Lumbricus terrestris) [TaxId: 6398]}
Probab=5.04 E-value=2.9e+02 Score=24.22 Aligned_cols=38 Identities=11% Similarity=0.141 Sum_probs=26.4
Q ss_pred CcEEEEEEEEEEEecccccCCCCceeeecccccCCCCCCCCCCccccceeEEEEEeeeeecCCCce
Q 047792 93 DGVFGIEGTLLLRSRNTYSSDGGVTYVQVAKSYDPGAISHEPGVRRRRSLVRFRLHGFWSESSGNL 158 (913)
Q Consensus 93 ~~v~~v~atl~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lsf~l~G~ysessg~L 158 (913)
+...+|.|++.+...+- -..++.+..++|||+-.+-+|
T Consensus 41 ~s~~~vka~v~~~~~~~----------------------------g~~~~~sl~~~G~Y~fg~~~L 78 (128)
T d2gtln1 41 TARIWLRALVESELERH----------------------------GENVTSSFNAKGYYNFASRRL 78 (128)
T ss_dssp TTCEEEEEEEECEEECS----------------------------SSEEECCEEEEEEEETTTTEE
T ss_pred cccccEEEEEEEEEEcC----------------------------CceEEEeeeeEEEEeccceEE
Confidence 35678888888865432 126777899999999865443
No 9
>d1dzla_ b.121.6.1 (A:) Papillomavirus L1 protein {Human papillomavirus type 16 [TaxId: 333760]}
Probab=4.83 E-value=1.1e+02 Score=32.20 Aligned_cols=16 Identities=44% Similarity=0.987 Sum_probs=13.5
Q ss_pred EeCCCCeEEEEeeccc
Q 047792 551 YDSKTGQLCMVGCRSI 566 (913)
Q Consensus 551 YD~~tG~LCMVGCR~v 566 (913)
.|||--|||+|||.=-
T Consensus 130 ~DpKQ~Ql~ivGC~P~ 145 (455)
T d1dzla_ 130 MDYKQTQLCLIGCKPP 145 (455)
T ss_dssp EBCCEEEEEEEESSCC
T ss_pred cCccceEEEEEeccCC
Confidence 4889999999999743
No 10
>d1dqva1 b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=4.72 E-value=7.2e+02 Score=20.00 Aligned_cols=67 Identities=13% Similarity=0.227 Sum_probs=36.0
Q ss_pred ceeEEEEEEEeCCCCeE--EEEeecccccCCCCCCCCCCCcceEEEEEeCCCCCCCCCceEEEEEEecCC-CCCCCcccc
Q 047792 542 GVEISAEGIYDSKTGQL--CMVGCRSIVSNNLSSTSDSMDCEILLNFQFPPSNPKENEDHIKGSIKSMRA-ESDPLYFEP 618 (913)
Q Consensus 542 ~~~IsAEGVYD~~tG~L--CMVGCR~v~s~~~~~~~~~~DC~I~V~l~fP~~~s~r~~~~i~G~I~S~R~-~~DPL~F~~ 618 (913)
+..++++ ||+++++| .++.|+++... +..+..|+= |++.+-+-. .+ +-+ +++.. ..+|-+=+.
T Consensus 6 ~l~~sl~--y~~~~~~L~V~V~~a~~L~~~---~~~g~~dpy--v~v~l~~~~-~~-----~~k-T~v~~~t~~P~wne~ 71 (130)
T d1dqva1 6 RISFALR--YLYGSDQLVVRILQALDLPAK---DSNGFSDPY--VKIYLLPDR-KK-----KFQ-TKVHRKTLNPIFNET 71 (130)
T ss_dssp EEEEEEE--CCSSSCEEEEEEEEEECCCCC---STTSCCCEE--EEEECTTST-TS-----CEE-CCCCCSCSSCEEEEE
T ss_pred EEEEEEE--EECCCCEEEEEEEeeeCCccc---cCCCCcceE--EEEEEccCC-Cc-----eEe-ceeEcCCCCeeeeeE
Confidence 4456665 89999999 56788888321 112234554 445543322 11 111 23333 447887776
Q ss_pred eeee
Q 047792 619 MEVY 622 (913)
Q Consensus 619 l~l~ 622 (913)
..+.
T Consensus 72 f~f~ 75 (130)
T d1dqva1 72 FQFS 75 (130)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6665
Done!