Query 047793
Match_columns 324
No_of_seqs 308 out of 1659
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 05:02:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047793.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047793hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tnx_A Papain; hydrolase, cyto 100.0 2.1E-87 7E-92 624.8 33.4 302 13-323 59-361 (363)
2 1pci_A Procaricain; zymogen, h 100.0 8.9E-87 3E-91 615.4 31.9 308 12-324 14-321 (322)
3 3qj3_A Cathepsin L-like protei 100.0 1.6E-86 5.5E-91 615.4 32.6 306 10-324 12-331 (331)
4 3qt4_A Cathepsin-L-like midgut 100.0 2.3E-86 7.7E-91 613.0 29.2 305 10-324 17-329 (329)
5 2c0y_A Procathepsin S; proenzy 100.0 5.6E-86 1.9E-90 608.7 28.6 305 13-324 5-315 (315)
6 1by8_A Protein (procathepsin K 100.0 1.9E-85 6.3E-90 605.0 29.2 303 14-324 5-314 (314)
7 1cs8_A Human procathepsin L; p 100.0 3.6E-85 1.2E-89 603.5 29.2 301 15-324 7-316 (316)
8 2o6x_A Procathepsin L1, secret 100.0 2.8E-84 9.7E-89 596.1 26.9 297 18-324 3-306 (310)
9 1xkg_A DER P I, major mite fec 100.0 1.5E-79 5E-84 564.0 24.4 286 18-324 6-302 (312)
10 3pdf_A Cathepsin C, dipeptidyl 100.0 2.6E-72 8.9E-77 535.9 23.6 278 35-322 135-433 (441)
11 3hhi_A Cathepsin B-like cystei 100.0 3.8E-71 1.3E-75 511.2 19.3 274 38-323 2-311 (325)
12 3p5u_A Actinidin; SAD, cystein 100.0 2.6E-68 8.9E-73 468.7 21.4 217 106-324 1-217 (220)
13 1cqd_A Protein (protease II); 100.0 9.3E-68 3.2E-72 465.2 23.4 216 105-324 2-217 (221)
14 1ppo_A Protease omega; hydrola 100.0 8.7E-68 3E-72 463.8 22.3 215 106-324 1-215 (216)
15 1iwd_A Ervatamin B; cysteine p 100.0 1.9E-67 6.6E-72 461.1 23.1 214 106-324 1-214 (215)
16 1yal_A Chymopapain; hydrolase, 100.0 2E-67 7E-72 462.0 22.4 215 106-324 1-215 (218)
17 2fo5_A Cysteine proteinase EP- 100.0 1.2E-67 4.3E-72 473.9 20.6 220 104-324 2-224 (262)
18 1s4v_A Cysteine endopeptidase; 100.0 2.9E-67 9.9E-72 464.3 21.8 219 105-324 1-219 (229)
19 3pbh_A Procathepsin B; thiol p 100.0 2.9E-67 9.8E-72 484.4 21.3 263 47-323 11-313 (317)
20 3u8e_A Papain-like cysteine pr 100.0 3.1E-67 1.1E-71 462.3 20.2 214 106-324 1-219 (222)
21 2cio_A Papain; hydrolase/inhib 100.0 1.3E-66 4.3E-71 455.1 23.4 211 106-324 1-211 (212)
22 3ovx_A Cathepsin S; hydrolase, 100.0 5.1E-67 1.7E-71 460.0 20.8 214 106-324 2-218 (218)
23 3kwz_A Cathepsin K; enzyme inh 100.0 1E-66 3.6E-71 457.1 22.2 212 106-324 1-215 (215)
24 3ioq_A CMS1MS2; caricaceae, cy 100.0 1.6E-66 5.5E-71 454.9 22.3 211 106-324 1-211 (213)
25 2bdz_A Mexicain; cysteine prot 100.0 2.5E-66 8.5E-71 453.7 23.3 211 106-324 1-211 (214)
26 2xu3_A Cathepsin L1; hydrolase 100.0 3.2E-66 1.1E-70 455.3 22.9 214 106-324 1-220 (220)
27 1o0e_A Ervatamin C; plant cyst 100.0 5.4E-66 1.8E-70 449.7 22.9 207 106-324 1-207 (208)
28 2oul_A Falcipain 2; cysteine p 100.0 3.7E-66 1.3E-70 460.6 21.8 215 104-324 16-240 (241)
29 3bwk_A Cysteine protease falci 100.0 4.2E-66 1.4E-70 460.8 20.5 216 103-324 17-242 (243)
30 2b1m_A SPE31; papain-like, sug 100.0 1.2E-65 4E-70 458.3 22.7 214 105-324 1-224 (246)
31 8pch_A Cathepsin H; hydrolase, 100.0 7.8E-66 2.7E-70 453.1 20.3 211 106-323 1-217 (220)
32 3f75_A Toxopain-2, cathepsin L 100.0 3.5E-66 1.2E-70 456.5 17.8 219 104-324 5-224 (224)
33 3i06_A Cruzipain; autocatalyti 100.0 1E-64 3.4E-69 444.2 23.5 208 106-324 1-214 (215)
34 1m6d_A Cathepsin F, catsf; pap 100.0 5.9E-65 2E-69 445.3 21.5 208 106-324 1-213 (214)
35 3f5v_A DER P 1 allergen; aller 100.0 1E-64 3.6E-69 446.4 19.4 210 104-324 8-222 (222)
36 1deu_A Procathepsin X; cystein 100.0 2.2E-60 7.7E-65 431.1 19.3 213 102-323 32-274 (277)
37 3cbj_A Cathepsin B; cathepsin 100.0 3.3E-60 1.1E-64 428.3 18.3 211 104-323 5-256 (266)
38 3qsd_A Cathepsin B-like peptid 100.0 1.8E-59 6.3E-64 420.8 19.1 210 105-323 2-252 (254)
39 2wbf_X Serine-repeat antigen p 100.0 7.5E-55 2.5E-59 393.5 20.1 211 108-323 9-260 (265)
40 3ois_A Cysteine protease; alph 100.0 9.1E-53 3.1E-57 384.2 14.4 233 61-306 13-273 (291)
41 2cb5_A Protein (bleomycin hydr 100.0 1.5E-41 5.2E-46 322.0 15.9 198 105-305 47-412 (453)
42 2e01_A Cysteine proteinase 1; 100.0 1.5E-40 5.1E-45 315.5 17.8 198 105-305 52-413 (457)
43 3pw3_A Aminopeptidase C; bleom 100.0 7.4E-36 2.5E-40 277.6 18.2 183 117-305 21-356 (383)
44 3f75_P Toxopain-2, cathepsin L 99.8 2.7E-19 9.2E-24 137.0 10.0 76 11-87 16-91 (106)
45 2l95_A Crammer, LP06209P; cyst 99.8 1.7E-18 5.7E-23 126.8 7.6 67 18-86 8-77 (80)
46 1x9y_A Cysteine proteinase; ha 96.6 0.033 1.1E-06 50.2 12.9 128 122-304 201-337 (367)
47 1pxv_A Cysteine protease; hydr 96.5 0.034 1.2E-06 45.3 11.1 128 123-305 26-162 (183)
48 1cv8_A Staphopain; cysteine pr 96.4 0.047 1.6E-06 44.3 11.7 119 123-291 17-144 (174)
49 3erv_A Putative C39-like pepti 89.3 1.6 5.3E-05 37.6 8.6 53 221-276 127-187 (236)
50 4d8b_A Streptopain; papain fol 61.7 13 0.00046 32.2 5.8 54 227-304 172-226 (261)
51 1dki_A Pyrogenic exotoxin B zy 55.0 28 0.00097 31.8 7.1 54 227-304 290-344 (371)
52 3bb7_A Interpain A; cysteine p 54.9 26 0.00089 31.4 6.7 59 227-304 239-298 (321)
53 2r9f_A Calpain-1 catalytic sub 31.1 32 0.0011 31.0 3.3 40 266-305 246-314 (339)
54 2nqa_A Calpain 8; calpain, cal 24.9 49 0.0017 29.5 3.4 41 265-305 240-309 (326)
55 1ziv_A Calpain 9; cysteine pro 24.3 49 0.0017 29.7 3.3 40 266-305 245-314 (339)
56 1th5_A NIFU1; iron-sulfur clus 21.4 32 0.0011 23.6 1.1 26 118-145 37-62 (74)
No 1
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=2.1e-87 Score=624.76 Aligned_cols=302 Identities=44% Similarity=0.807 Sum_probs=267.4
Q ss_pred hhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEcccCCCCCHHHHHHhhcCccCCCCCCC
Q 047793 13 EASLSEKHEQWMSKYGKVYKNPEEKEKRFRIFKDNVEFIESLNAAGNKPYKLSINEFADQTNQEFKAFRNGYRRPDGLTS 92 (324)
Q Consensus 13 ~~~~~~~f~~~~~~~~k~Y~~~~e~~~r~~~f~~n~~~I~~~N~~~~~s~~~g~N~fsd~t~~E~~~~~~~~~~~~~~~~ 92 (324)
++.+.++|++||++|+|.|.+.+|+.+|+.||++|++.|++||++ +.+|++|+|+|+|||.+||++++++.........
T Consensus 59 ~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~-~~sy~~g~N~FaDlT~eEf~~~~~~~~~~~~~~~ 137 (363)
T 3tnx_A 59 TERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKK-NNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTT 137 (363)
T ss_dssp HHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTS-CCSEEECSCTTTTSCHHHHHHHHSCSSCSCCCCS
T ss_pred HHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcC-CCCeEEeccccccCCHHHHHHHhccccccccccc
Confidence 568889999999999999999999999999999999999999984 6799999999999999999999887654332111
Q ss_pred C-CCCcccccCCCCCCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCC
Q 047793 93 R-KGTSFKYENVIDVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCE 171 (324)
Q Consensus 93 ~-~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~ 171 (324)
. ...........+||++||||++|.||||||||.||||||||++++||++++++++..+.||+|+|+||... +.||+
T Consensus 138 ~~~~~~~~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~LvdC~~~--~~GC~ 215 (363)
T 3tnx_A 138 ELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQELLDCDRR--SYGCN 215 (363)
T ss_dssp SSSSSCCCCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT--SCTTB
T ss_pred ccccccccCcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHHhcccCC--CCCCC
Confidence 1 11111122234799999999999999999999999999999999999999999999999999999999875 68999
Q ss_pred CCchHHHHHHHHHhCCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHHcCCeEEEEeccCCcccc
Q 047793 172 GGEMEDAFKFIIHNDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQF 251 (324)
Q Consensus 172 gG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~ 251 (324)
||.+..|+.|+.+. |+++|++|||.+.++.|..........++.++..++..++..++.+|++|||+|++++...+|++
T Consensus 216 GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~e~~l~~~v~~gPvsvai~a~~~~F~~ 294 (363)
T 3tnx_A 216 GGYPWSALQLVAQY-GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQL 294 (363)
T ss_dssp CCCHHHHHHHHHHT-CBCBTTTSCCCSSCCCCCGGGGCSCSBCCCEEEEECSSCHHHHHHHHTTSCEEEEECCCSHHHHT
T ss_pred CCChHHHHhHHHhc-CccccccCCCcCcCCCcccCCCCCceeeccceEEcchhhHHHHHHHHHcCCcEEEEEecchhhhC
Confidence 99999999999755 99999999999988877765444556677888888888899999999999999999987788999
Q ss_pred ccCCeeeCCCCCCCCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceee
Q 047793 252 YSSGVFTGDCGTELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPT 323 (324)
Q Consensus 252 y~~Giy~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~ 323 (324)
|++|||..+|+...+|||+|||||+ +|||||||||++|||+|||||+|+.++..|+|||++.++||+
T Consensus 295 Y~sGVy~~~~~~~lnHaV~iVGyG~-----~YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~~~a~yPi 361 (363)
T 3tnx_A 295 YRGGIFVGPCGNKVDHAVAAVGYGP-----NYILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPV 361 (363)
T ss_dssp EEEEEECCCCCSCCCEEEEEEEEET-----TEEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTTSCEEEEE
T ss_pred CCCCEECCCCCCCCCeEEEEEEcCC-----CcEEEEeCCCCccccCcEEEEEcCCCCCCCcCCccceeeecc
Confidence 9999999999888999999999985 499999999999999999999999988789999999999998
No 2
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=8.9e-87 Score=615.35 Aligned_cols=308 Identities=46% Similarity=0.866 Sum_probs=270.4
Q ss_pred ChhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEcccCCCCCHHHHHHhhcCccCCCCCC
Q 047793 12 QEASLSEKHEQWMSKYGKVYKNPEEKEKRFRIFKDNVEFIESLNAAGNKPYKLSINEFADQTNQEFKAFRNGYRRPDGLT 91 (324)
Q Consensus 12 ~~~~~~~~f~~~~~~~~k~Y~~~~e~~~r~~~f~~n~~~I~~~N~~~~~s~~~g~N~fsd~t~~E~~~~~~~~~~~~~~~ 91 (324)
.|..+..+|++||++|+|.|.+.+|+.+|+.||++|+++|++||++ +.+|++|+|+|+|||.+||++++++........
T Consensus 14 ~e~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~-~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~~ 92 (322)
T 1pci_A 14 STERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKK-NNSYWLGLNEFADLSNDEFNEKYVGSLIDATIE 92 (322)
T ss_dssp HHHHHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHHTT-CCSEEECSCTTTTSCHHHHHHHHCCCBCCCSSC
T ss_pred chHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhhcc-CCceEEecCccccCCHHHHHHHhcCCCCccccc
Confidence 3567788999999999999998889999999999999999999985 678999999999999999999887754332110
Q ss_pred CCCCCcccccCCCCCCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCC
Q 047793 92 SRKGTSFKYENVIDVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCE 171 (324)
Q Consensus 92 ~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~ 171 (324)
......+......+||++||||++|+|+||||||.||||||||++++||++++|+++..++||+|+|+||+. .+.||+
T Consensus 93 ~~~~~~~~~~~~~~lP~~~DwR~~g~vt~VkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~lSeq~lvdC~~--~~~gC~ 170 (322)
T 1pci_A 93 QSYDEEFINEDIVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER--RSHGCK 170 (322)
T ss_dssp CCCSEECCCCCCCCSCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHSCT--TSCGGG
T ss_pred cccccccccccccCCCCeEecccCCCCCCccccccCCccHHHHHHHHHHHHHHHHcCCccccCHHHHHhhcC--CCCCCC
Confidence 010111222233479999999999999999999999999999999999999999999999999999999986 478999
Q ss_pred CCchHHHHHHHHHhCCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHHcCCeEEEEeccCCcccc
Q 047793 172 GGEMEDAFKFIIHNDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQF 251 (324)
Q Consensus 172 gG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~ 251 (324)
||++..|++|+.++ ||++|++|||.+.++.|.........++|++|..++..+++.|+++|++|||+|+|+++.++|++
T Consensus 171 GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~e~~l~~~l~~GPV~v~i~~~~~~f~~ 249 (322)
T 1pci_A 171 GGYPPYALEYVAKN-GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQL 249 (322)
T ss_dssp CBCHHHHHHHHHHH-CBCBTTTSCCCSSCCCCTTTTCCSCCBCCCCEEECCSSBHHHHHHHHHHSCEEEEECTTCHHHHT
T ss_pred CCCHHHHHHHHHHh-CCCchhhCCCCCCCCCCCCCCCCCceEEEeeEEEeCCCcHHHHHHHHHHCCEEEEEecccccccc
Confidence 99999999999877 89999999999999999876333456789999999877899999999999999999997678999
Q ss_pred ccCCeeeCCCCCCCCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 252 YSSGVFTGDCGTELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 252 y~~Giy~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
|++|||.++|+..++|||+|||||++ +|++|||||||||++||++|||||+|+.+.+.|.|||++.++||++
T Consensus 250 Y~~Gvy~~~c~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~n~CgI~~~~~yp~~ 321 (322)
T 1pci_A 250 YKGGIFEGPCGTKVDGAVTAVGYGKS-GGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 321 (322)
T ss_dssp EEEEEECCSCCSCCCEEEEEEEEEEE-TTEEEEEEECSBCSSSTBTTEEEEECCCSBSSCGGGGGGCCEEECC
T ss_pred cCCeEeCCCCCCCCCEEEEEEEEecc-CCccEEEEEeCCCCcccCCeEEEEEcCCCCCCCcCCcccceeEEEe
Confidence 99999998898888999999999998 6999999999999999999999999997544468999999999985
No 3
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=1.6e-86 Score=615.37 Aligned_cols=306 Identities=41% Similarity=0.769 Sum_probs=270.3
Q ss_pred hcChhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHhcC---CCCCeEEEcccCCCCCHHHHHHhhcCccC
Q 047793 10 KLQEASLSEKHEQWMSKYGKVYKNPEEKEKRFRIFKDNVEFIESLNAA---GNKPYKLSINEFADQTNQEFKAFRNGYRR 86 (324)
Q Consensus 10 ~~~~~~~~~~f~~~~~~~~k~Y~~~~e~~~r~~~f~~n~~~I~~~N~~---~~~s~~~g~N~fsd~t~~E~~~~~~~~~~ 86 (324)
.+.+..+..+|++||++|+|.|.+.+|+.+|+.||++|++.|++||++ ++.+|++|+|+|+|||.+||++++++...
T Consensus 12 ~~~~~~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~~ 91 (331)
T 3qj3_A 12 ALPSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLIM 91 (331)
T ss_dssp -CCHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCCC
T ss_pred CCCCHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhccccc
Confidence 355677889999999999999999889999999999999999999985 57899999999999999999998887654
Q ss_pred CCCCCCCCCCccccc------CCCCCCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCC--CccCCHHHH
Q 047793 87 PDGLTSRKGTSFKYE------NVIDVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGK--LISLSEQEL 158 (324)
Q Consensus 87 ~~~~~~~~~~~~~~~------~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~--~~~lS~q~l 158 (324)
+... ......+... ...+||++||||++|+||||||||.||||||||++++||++++++++. .++||+|+|
T Consensus 92 ~~~~-~~~~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ~L 170 (331)
T 3qj3_A 92 PADL-HKNGIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQQL 170 (331)
T ss_dssp CSST-TTTCEEECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCHHHH
T ss_pred cccc-cccCcccccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCHHHH
Confidence 3211 0111111111 224799999999999999999999999999999999999999999998 899999999
Q ss_pred hhhcCCCCCCCCCCCchHHHHHHHHHhCCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHH-cCC
Q 047793 159 VSCDTSGVDHGCEGGEMEDAFKFIIHNDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVA-NQP 237 (324)
Q Consensus 159 ~~c~~~~~~~gc~gG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gP 237 (324)
+||+.. +.||+||++..|++|+.++.||++|++|||.+.++.|... .....+++++|..++..++++|+++|+ +||
T Consensus 171 vdC~~~--~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~~~e~~lk~al~~~GP 247 (331)
T 3qj3_A 171 VDCVPN--ALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMADGNCHYD-PNQVAARLSGYVYLSGPDENMLADMVATKGP 247 (331)
T ss_dssp HHHCTT--SCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCC-TTSEEECCSEEEEESSCCHHHHHHHHHHHCC
T ss_pred hhhccC--CCCCCCCCHHHHHHHHHHcCCcCcccccCccCCCCCCCCC-cccceeEeeEEEEeCCCCHHHHHHHHHhCCC
Confidence 999875 7899999999999999988899999999999999999876 455677899999998779999999999 699
Q ss_pred eEEEEeccCCccccccCCeeeCC-CC-CCCCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCccc
Q 047793 238 VAVSIDASGSAFQFYSSGVFTGD-CG-TELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGI 315 (324)
Q Consensus 238 V~v~~~~~~~~f~~y~~Giy~~~-~~-~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi 315 (324)
|+|+|++.. +|++|++|||..+ |. ..++|||+|||||++ +|++|||||||||++||++|||||+|+.+ |.|||
T Consensus 248 V~v~i~a~~-~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI 322 (331)
T 3qj3_A 248 VAVAFDADD-PFGSYSGGVYYNPTCETNKFTHAVLIVGYGNE-NGQDYWLVKNSWGDGWGLDGYFKIARNAN---NHCGI 322 (331)
T ss_dssp EEEEECCCT-TGGGEEEEEECCTTCCSSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGT
T ss_pred EEEEEEccc-ccccccCceEeCCCCCCCcCCEEEEEEEEecc-CCceEEEEEcCCCCCcCCCCEEEEEcCCC---CccCc
Confidence 999999984 4999999999987 76 578999999999987 79999999999999999999999999974 46999
Q ss_pred ccccceeeC
Q 047793 316 AMDSSYPTA 324 (324)
Q Consensus 316 ~~~~~~p~~ 324 (324)
++.++||++
T Consensus 323 ~~~~~~p~v 331 (331)
T 3qj3_A 323 AGVASVPTL 331 (331)
T ss_dssp TTSCEEEEC
T ss_pred CCceeeeeC
Confidence 999999986
No 4
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=2.3e-86 Score=612.99 Aligned_cols=305 Identities=41% Similarity=0.757 Sum_probs=266.4
Q ss_pred hcChhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHhcC---CCCCeEEEcccCCCCCHHHHHHhhcCccC
Q 047793 10 KLQEASLSEKHEQWMSKYGKVYKNPEEKEKRFRIFKDNVEFIESLNAA---GNKPYKLSINEFADQTNQEFKAFRNGYRR 86 (324)
Q Consensus 10 ~~~~~~~~~~f~~~~~~~~k~Y~~~~e~~~r~~~f~~n~~~I~~~N~~---~~~s~~~g~N~fsd~t~~E~~~~~~~~~~ 86 (324)
.+.++.+..+|++||++|+|.|.+.+|+.+|+.||++|+++|++||++ ++.+|++|+|+|+|||.+||++ +++.++
T Consensus 17 ~~~~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~-~~g~~~ 95 (329)
T 3qt4_A 17 SLPKSLFQEQWSQFKLTHKKSYSSPIEEIRRQLIFKDNVAKIAEHNAKFEKGEVTYSKAMNQFGDMSKEEFLA-YVNRGK 95 (329)
T ss_dssp ---CCHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEECCCGGGGCCHHHHHH-HHHHTC
T ss_pred ccCHHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCeEEeccccccCCHHHHHH-hcCCcc
Confidence 355678889999999999999999889999999999999999999984 5689999999999999999999 666543
Q ss_pred CCCCCCC--CCCcccccCCCCCCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCC
Q 047793 87 PDGLTSR--KGTSFKYENVIDVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTS 164 (324)
Q Consensus 87 ~~~~~~~--~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~ 164 (324)
+...... ....+.... .+||++||||++ +||||||||.||||||||++++||++++++++..++||||+|+||+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~-~~lP~~~DwR~~-~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~LvdC~~~ 173 (329)
T 3qt4_A 96 AQKPKHPENLRMPYVSSK-KPLAASVDWRSN-AVSEVKDQGQCGSSWSFSTTGAVEGQLALQRGRLTSLSEQNLIDCSSS 173 (329)
T ss_dssp CC------CCEEECCCCC-SCCCSCEECTTT-SCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGG
T ss_pred cccccccccccccccCCc-cCCCCCEEcccc-ccCCCccCCCCcChHHHHHHHHHHHHHHHHcCCcccCCHHHHHHhccc
Confidence 2110000 011122222 479999999999 999999999999999999999999999999999999999999999875
Q ss_pred CCCCCCCCCchHHHHHHHHHhCCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHH-cCCeEEEEe
Q 047793 165 GVDHGCEGGEMEDAFKFIIHNDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVA-NQPVAVSID 243 (324)
Q Consensus 165 ~~~~gc~gG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPV~v~~~ 243 (324)
.++.||+||.+..|++|+.++ ||++|++|||.+.++.|... .....++|++|..++..++++|+++|+ +|||+|+|+
T Consensus 174 ~g~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v~i~ 251 (329)
T 3qt4_A 174 YGNAGCDGGWMDSAFSYIHDY-GIMSESAYPYEAQGDYCRFD-SSQSVTTLSGYYDLPSGDENSLADAVGQAGPVAVAID 251 (329)
T ss_dssp GTCCTTBCCCHHHHHHHHHHS-CBCBTTTSCCCSSCCCCCCC-GGGCCBCCSEEEECCTTCHHHHHHHHHHTCCEEEEEC
T ss_pred cCCCCCCCCChhHHHHHHHHc-CCCcHHHeeeecCCCCCCCC-cccceEEeceEEEecCCCHHHHHHHHHhCCCEEEEEe
Confidence 567899999999999999987 99999999999999999876 345667899999998788999999999 699999999
Q ss_pred ccCCccccccCCeeeCC-CC-CCCCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccce
Q 047793 244 ASGSAFQFYSSGVFTGD-CG-TELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSY 321 (324)
Q Consensus 244 ~~~~~f~~y~~Giy~~~-~~-~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~ 321 (324)
+. .+|++|++|||..+ |. ..++|||+|||||++ +|++|||||||||++||++|||||+|+.+ |.|||++.++|
T Consensus 252 a~-~~f~~Y~~GVy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~~y 326 (329)
T 3qt4_A 252 AT-DELQFYSGGLFYDQTCNQSDLNHGVLVVGYGSD-NGQDYWILKNSWGSGWGESGYWRQVRNYG---NNCGIATAASY 326 (329)
T ss_dssp CC-GGGTTEEEEEECCSSCCSSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEESSSS---SGGGTTTTCEE
T ss_pred cC-hhhhhccCceeecCCCCCCcCCEEEEEEEEEee-CCccEEEEEeCCCCcccCCcEEEEEeCCC---CccCCCCceeE
Confidence 99 49999999999986 86 579999999999987 69999999999999999999999999974 46999999999
Q ss_pred eeC
Q 047793 322 PTA 324 (324)
Q Consensus 322 p~~ 324 (324)
|++
T Consensus 327 p~v 329 (329)
T 3qt4_A 327 PAL 329 (329)
T ss_dssp EEC
T ss_pred eeC
Confidence 986
No 5
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=5.6e-86 Score=608.68 Aligned_cols=305 Identities=42% Similarity=0.781 Sum_probs=266.4
Q ss_pred hhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHhcC---CCCCeEEEcccCCCCCHHHHHHhhcCccCCCC
Q 047793 13 EASLSEKHEQWMSKYGKVYKNPEEKEKRFRIFKDNVEFIESLNAA---GNKPYKLSINEFADQTNQEFKAFRNGYRRPDG 89 (324)
Q Consensus 13 ~~~~~~~f~~~~~~~~k~Y~~~~e~~~r~~~f~~n~~~I~~~N~~---~~~s~~~g~N~fsd~t~~E~~~~~~~~~~~~~ 89 (324)
+..+..+|++||++|+|.|.+.+|+.+|+.||++|+++|++||++ +..+|++|+|+|+|||.+||++++++...+..
T Consensus 5 ~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~s~~~g~N~FaDlt~eEf~~~~~g~~~~~~ 84 (315)
T 2c0y_A 5 DPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQ 84 (315)
T ss_dssp CGGGHHHHHHHHHHHTCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCGGGGCCHHHHHHHTTSBCCCCG
T ss_pred hHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEeccCccccCCHHHHHHHhcCCCCCcc
Confidence 446778999999999999998889999999999999999999975 35799999999999999999888776554321
Q ss_pred CCCCCCCcccccCCCCCCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhc-CCCCCC
Q 047793 90 LTSRKGTSFKYENVIDVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCD-TSGVDH 168 (324)
Q Consensus 90 ~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~-~~~~~~ 168 (324)
. .....+......+||++||||++|+||||||||.||||||||++++||++++|+++..++||+|+|+||+ ..+++.
T Consensus 85 ~--~~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~~~~~ 162 (315)
T 2c0y_A 85 W--QRNITYKSNPNRILPDSVDWREKGCVTEVKYQGSCGAAWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNK 162 (315)
T ss_dssp G--GSCBCC------CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCC
T ss_pred c--cCCccccCcccCCCCCeEecCCCCCcCCCcCcccCCCcHHHHHHHHHHHHHHHHhCCCcCcCHHHHHhhcccccCCC
Confidence 1 0111121111236999999999999999999999999999999999999999999999999999999998 444578
Q ss_pred CCCCCchHHHHHHHHHhCCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHH-cCCeEEEEeccCC
Q 047793 169 GCEGGEMEDAFKFIIHNDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVA-NQPVAVSIDASGS 247 (324)
Q Consensus 169 gc~gG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPV~v~~~~~~~ 247 (324)
||+||++..|++|+.++.||++|++|||.+.++.|... ......+|++|..++..++++|+++|+ +|||+|+|+++.+
T Consensus 163 gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~~~ 241 (315)
T 2c0y_A 163 GCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYD-SKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHP 241 (315)
T ss_dssp GGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCC-GGGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSH
T ss_pred CCCCCCHHHHHHHHHHhCCcCchhcCCCccCCCCcccC-CcccccccCCeEEeCCCCHHHHHHHHHHcCCEEEEEecCch
Confidence 99999999999999877799999999999999999875 334567889999998778999999999 6999999999866
Q ss_pred ccccccCCeeeCC-CCCCCCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 248 AFQFYSSGVFTGD-CGTELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 248 ~f~~y~~Giy~~~-~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
+|++|++|||..+ |+..++|||+|||||++ +|++|||||||||++||++|||||+|+.+ |.|||++.++||++
T Consensus 242 ~f~~Y~~Gvy~~~~c~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~~~p~~ 315 (315)
T 2c0y_A 242 SFFLYRSGVYYEPSCTQNVNHGVLVVGYGDL-NGKEYWLVKNSWGHNFGEEGYIRMARNKG---NHCGIASFPSYPEI 315 (315)
T ss_dssp HHHTEEEEEECCTTCCSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEEEC
T ss_pred hhhccCCCcccCCCCCCcCCEEEEEEEEeec-CCCcEEEEEcCCCCCcCCCcEEEEEcCCC---CccCcCceeEEeeC
Confidence 8999999999988 88889999999999998 79999999999999999999999999863 46999999999986
No 6
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=1.9e-85 Score=604.96 Aligned_cols=303 Identities=42% Similarity=0.768 Sum_probs=265.5
Q ss_pred hHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHhcC---CCCCeEEEcccCCCCCHHHHHHhhcCccCCCCC
Q 047793 14 ASLSEKHEQWMSKYGKVYKNPEEKEKRFRIFKDNVEFIESLNAA---GNKPYKLSINEFADQTNQEFKAFRNGYRRPDGL 90 (324)
Q Consensus 14 ~~~~~~f~~~~~~~~k~Y~~~~e~~~r~~~f~~n~~~I~~~N~~---~~~s~~~g~N~fsd~t~~E~~~~~~~~~~~~~~ 90 (324)
..+..+|++||++|+|.|.+.+|+.+|+.||++|+++|++||++ +..+|++|+|+|+|||.+||++++++...+...
T Consensus 5 ~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~ 84 (314)
T 1by8_A 5 EILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSH 84 (314)
T ss_dssp CTHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSEEECCCTTSSSCHHHHHHHSCCCCCCSCC
T ss_pred HHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEEcccccccCCHHHHHHHhccCCCCccc
Confidence 35778999999999999999889999999999999999999985 357899999999999999999887765443221
Q ss_pred CCCCCCccccc-CCCCCCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCC
Q 047793 91 TSRKGTSFKYE-NVIDVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHG 169 (324)
Q Consensus 91 ~~~~~~~~~~~-~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~g 169 (324)
......+... ....||++||||++|+||||||||.||||||||++++||++++|+++..++||+|+|+||+. .+.|
T Consensus 85 -~~~~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFs~~~alE~~~~i~~g~~~~LSeq~lvdC~~--~~~g 161 (314)
T 1by8_A 85 -SRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDG 161 (314)
T ss_dssp -CCSSSSSBCCCCSSCCCSCCBSTTTTCSCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHTTCT--TSCG
T ss_pred -ccCCccccccccccCCCCeEeCCCCCCCCCcccCCCCCCcHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcC--CCCC
Confidence 0111122211 12239999999999999999999999999999999999999999999999999999999986 4789
Q ss_pred CCCCchHHHHHHHHHhCCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHH-cCCeEEEEeccCCc
Q 047793 170 CEGGEMEDAFKFIIHNDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVA-NQPVAVSIDASGSA 248 (324)
Q Consensus 170 c~gG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPV~v~~~~~~~~ 248 (324)
|+||++..|++|+.++.||++|++|||.+.++.|... ......+|++|..++..++++|+++|+ +|||+|+|+++.++
T Consensus 162 C~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~~~~ 240 (314)
T 1by8_A 162 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYN-PTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTS 240 (314)
T ss_dssp GGCCCSHHHHHHHHHTTCBCBTTTSCCCSSCCCCCCC-GGGCCBCCSCEEECCSSCHHHHHHHHHHHCCEEEEECCCSHH
T ss_pred CcCCCHHHHHHHHHHcCCcCcHhhCCCCCCCCCcCCC-CccceeEECcEEEecCCCHHHHHHHHHHcCCEEEEEEeChHH
Confidence 9999999999999877799999999999999999875 334567889999998778999999999 69999999998668
Q ss_pred cccccCCeeeCC-CCC-CCCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 249 FQFYSSGVFTGD-CGT-ELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 249 f~~y~~Giy~~~-~~~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
|++|++|||..+ |+. .++|||+|||||++ +|++|||||||||++||++|||||+|+.+ |.|||++.++||++
T Consensus 241 f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~~~p~~ 314 (314)
T 1by8_A 241 FQFYSKGVYYDESCNSDNLNHAVLAVGYGIQ-KGNKHWIIKNSWGENWGNKGYILMARNKN---NACGIANLASFPKM 314 (314)
T ss_dssp HHTEEEECBCCTTCCSSCCCEEEEEEEEEEE-TTEEEEEEECSBTTTSTBTTEEEECCSSS---CGGGTTSSCEEECC
T ss_pred hhhccCceecCCCCCCCCCCeEEEEEEEecc-CCceEEEEEcCCCCCcCcCCEEEEEcCCC---CcCCccCeeEEeeC
Confidence 999999999987 875 78999999999988 79999999999999999999999999863 46999999999985
No 7
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=3.6e-85 Score=603.52 Aligned_cols=301 Identities=42% Similarity=0.838 Sum_probs=264.0
Q ss_pred HHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHhcC---CCCCeEEEcccCCCCCHHHHHHhhcCccCCCCCC
Q 047793 15 SLSEKHEQWMSKYGKVYKNPEEKEKRFRIFKDNVEFIESLNAA---GNKPYKLSINEFADQTNQEFKAFRNGYRRPDGLT 91 (324)
Q Consensus 15 ~~~~~f~~~~~~~~k~Y~~~~e~~~r~~~f~~n~~~I~~~N~~---~~~s~~~g~N~fsd~t~~E~~~~~~~~~~~~~~~ 91 (324)
.+..+|++||++|+|.| +.+|+.+|+.||++|+++|++||++ ++.+|++|+|+|+|||.+||++++++..++...
T Consensus 7 ~~~~~f~~~~~~~~k~Y-~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~- 84 (316)
T 1cs8_A 7 SLEAQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPR- 84 (316)
T ss_dssp GGHHHHHHHHHHTTCCC-CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCCS-
T ss_pred HHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHhhhccccCCcceEEccCccCCCCHHHHHHHhcCCCCCccc-
Confidence 46789999999999999 7779999999999999999999985 467999999999999999999887775432211
Q ss_pred CCCCCcccccCCCCCCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCC
Q 047793 92 SRKGTSFKYENVIDVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCE 171 (324)
Q Consensus 92 ~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~ 171 (324)
....+......+||++||||++|+|+||||||.||||||||++++||++++|+++..++||+|+|+||+..+++.||+
T Consensus 85 --~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~~~g~~gC~ 162 (316)
T 1cs8_A 85 --KGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCN 162 (316)
T ss_dssp --CCEECCCCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGG
T ss_pred --cCccccCccccCCCCcEecCCCCCcCCCCcccCCccHHHHHHHHHHHHHHHHHcCCCcCcCHHHHHHhccccCCCCCC
Confidence 111122122237999999999999999999999999999999999999999999999999999999998654578999
Q ss_pred CCchHHHHHHHHHhCCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHH-cCCeEEEEeccCCccc
Q 047793 172 GGEMEDAFKFIIHNDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVA-NQPVAVSIDASGSAFQ 250 (324)
Q Consensus 172 gG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~ 250 (324)
||++..|++|+.++.||++|++|||.+.++.|... .....++|++|..++. ++++|+++|+ +|||+|+|++..++|+
T Consensus 163 GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~i~~~~~~f~ 240 (316)
T 1cs8_A 163 GGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYN-PKYSVANDAGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFL 240 (316)
T ss_dssp CBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCC-GGGEEECCCCEEECCS-CHHHHHHHHHHHCCEEEEECCCSHHHH
T ss_pred CCCHHHHHHHHHHhCCcCchhccCCCCCCCCcCCC-CccceeEeccEEEeCC-CHHHHHHHHHhcCCEEEEEecCChhhc
Confidence 99999999999867799999999999999999876 3445678999999986 8999999999 6999999999856899
Q ss_pred cccCCeeeCC-CCC-CCCeEEEEeeec---ccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 251 FYSSGVFTGD-CGT-ELDHGVTAVGYG---ATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 251 ~y~~Giy~~~-~~~-~~~Hav~iVGyg---~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
+|++|||..+ |+. .++|||+||||| ++++|++|||||||||++||++|||||+|+.+ |.|||++.++||++
T Consensus 241 ~Y~~Gvy~~~~c~~~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~~~p~~ 316 (316)
T 1cs8_A 241 FYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR---NHCGIASAASYPTV 316 (316)
T ss_dssp TEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEECC
T ss_pred cccCceECCCCCCCCCCCEEEEEEEecCCcccCCCCcEEEEEcCCCCCcccCCEEEEECCCC---CccCccceeeEeeC
Confidence 9999999987 875 789999999999 55468999999999999999999999999974 46999999999985
No 8
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=2.8e-84 Score=596.07 Aligned_cols=297 Identities=41% Similarity=0.779 Sum_probs=258.7
Q ss_pred HHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHhcC---CCCCeEEEcccCCCCCHHHHHHhhcC-ccCCCCCCCC
Q 047793 18 EKHEQWMSKYGKVYKNPEEKEKRFRIFKDNVEFIESLNAA---GNKPYKLSINEFADQTNQEFKAFRNG-YRRPDGLTSR 93 (324)
Q Consensus 18 ~~f~~~~~~~~k~Y~~~~e~~~r~~~f~~n~~~I~~~N~~---~~~s~~~g~N~fsd~t~~E~~~~~~~-~~~~~~~~~~ 93 (324)
.+|++||++|+|.|.+.+|+.+| .||++|+++|++||++ ++.+|++|+|+|+|||.+||++++++ ...+... ..
T Consensus 3 ~~f~~~~~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~~-~~ 80 (310)
T 2o6x_A 3 DLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDI-LS 80 (310)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSSSEEECCCTTTTSCHHHHHHHHCCCCCCGGGG-SC
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHhhhccCCCcEEEeccccCCCCHHHHHHHhcCCCCCcccc-cc
Confidence 58999999999999988899999 9999999999999985 35799999999999999999987776 4332110 00
Q ss_pred CCCcccccCCCCCCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCCCC
Q 047793 94 KGTSFKYENVIDVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGG 173 (324)
Q Consensus 94 ~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~gG 173 (324)
....+..... +||++||||++|+||||||||.||||||||++++||++++|+++..++||+|+|+||+..+++.||+||
T Consensus 81 ~~~~~~~~~~-~lP~~~DwR~~g~vtpVkdQg~CGSCWAfa~~~alE~~~~i~~g~~~~LS~q~lvdC~~~~~~~gC~GG 159 (310)
T 2o6x_A 81 HGVPYEANNR-AVPDKIDWRESGYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNNGCGGG 159 (310)
T ss_dssp SSEECCC-----CCSCEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSSCCCBCHHHHHHHCGGGTCCGGGCC
T ss_pred cCCccccccC-CCCCeEecCcCCCCCCcccCCCCCccHHHHhHHHHHHHHHHHhCCCcCcCHHHHHHhhhccCCCCCCCC
Confidence 1111221222 699999999999999999999999999999999999999999999999999999999864457899999
Q ss_pred chHHHHHHHHHhCCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHH-cCCeEEEEeccCCccccc
Q 047793 174 EMEDAFKFIIHNDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVA-NQPVAVSIDASGSAFQFY 252 (324)
Q Consensus 174 ~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y 252 (324)
++..|++|+. +.||++|++|||.+.++.|... .....++|++|..++..++++|+++|+ +|||+|+|+++ .+|++|
T Consensus 160 ~~~~a~~yi~-~~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~~~~~~i~~~l~~~GPV~v~i~~~-~~f~~Y 236 (310)
T 2o6x_A 160 LMENAYQYLK-QFGLETESSYPYTAVEGQCRYN-KQLGVAKVTGFYTVHSGSEVELKNLVGAEGPAAVAVDVE-SDFMMY 236 (310)
T ss_dssp CHHHHHHHHT-TSCBCBTTTSCCCSSCCCCCCC-GGGCCEEEEEEEEECSCCHHHHHHHHHHHCCEEEEECCC-HHHHTE
T ss_pred CHHHHHHHHH-HCCcCchhcCCCCCCCCCccCC-CCCCceEeCeEEEeCCCCHHHHHHHHHhcCCeEEEEecc-hhhhhC
Confidence 9999999998 6799999999999999999875 344578899999998778999999999 69999999998 689999
Q ss_pred cCCeeeCC-CC-CCCCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 253 SSGVFTGD-CG-TELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 253 ~~Giy~~~-~~-~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
++|||..+ |+ ..++|||+|||||++ +|++|||||||||++||++|||||+|+.+ |.|||++.++||++
T Consensus 237 ~~Gvy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~Cgi~~~~~~p~~ 306 (310)
T 2o6x_A 237 RSGIYQSQTCSPLRVNHAVLAVGYGTQ-GGTDYWIVKNSWGLSWGERGYIRMVRNRG---NMCGIASLASLPMV 306 (310)
T ss_dssp EEEEECCSSCCTTCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSEEEEEE
T ss_pred CCceecCCCCCCCCCCEEEEEEEEecc-CCceEEEEEeCCCCccCCCcEEEEEcCCC---CcCCccceeeEEEe
Confidence 99999876 87 478999999999998 79999999999999999999999999864 46999999999984
No 9
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=1.5e-79 Score=564.05 Aligned_cols=286 Identities=31% Similarity=0.537 Sum_probs=246.9
Q ss_pred HHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEcccCCCCCHHHHHHhhcCccCCCCCCCCCCCc
Q 047793 18 EKHEQWMSKYGKVYKNPEEKEKRFRIFKDNVEFIESLNAAGNKPYKLSINEFADQTNQEFKAFRNGYRRPDGLTSRKGTS 97 (324)
Q Consensus 18 ~~f~~~~~~~~k~Y~~~~e~~~r~~~f~~n~~~I~~~N~~~~~s~~~g~N~fsd~t~~E~~~~~~~~~~~~~~~~~~~~~ 97 (324)
.+|++||++|+|.|.+.+|+.+|+.||++|++.|++ |+ + |+|+|+|||.+||++++++...+... ......
T Consensus 6 ~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~-N~-~------g~N~F~Dlt~eEf~~~~~~~~~~~~~-~~~~~~ 76 (312)
T 1xkg_A 6 KTFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQS-NG-G------AINHLSDLSLDEFKNRFLMSAEAFEH-LKTQFD 76 (312)
T ss_dssp CSHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH-HC-C------CCCTTTTSCHHHHHHHHSBCHHHHHH-HHHHHC
T ss_pred HHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHh-cc-C------CCCcccCCCHHHHHHHhcCCCCcccc-ccCCcc
Confidence 359999999999999988999999999999999999 75 2 99999999999999866653211100 000001
Q ss_pred ccc-----cCCCCCCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCCC
Q 047793 98 FKY-----ENVIDVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEG 172 (324)
Q Consensus 98 ~~~-----~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~g 172 (324)
+.. ....+||++||||++|+|+||||||.||||||||++++||++++|+++..++||+|+|+||+. ..||+|
T Consensus 77 ~~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~---~~GC~G 153 (312)
T 1xkg_A 77 LNAETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRDQSLDLAEQELVDCAS---QHGCHG 153 (312)
T ss_dssp -----CBCCCCSCCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC---SSTTBC
T ss_pred cccccccccccccCCCccccccCCCcCCccccCCCCccHHHHHHHHHHHHHHHHhCCCCCcCHHHHHhccC---CCCCCC
Confidence 110 012379999999999999999999999999999999999999999999999999999999982 279999
Q ss_pred CchHHHHHHHHHhCCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHHc--CCeEEEEeccCC-cc
Q 047793 173 GEMEDAFKFIIHNDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVAN--QPVAVSIDASGS-AF 249 (324)
Q Consensus 173 G~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~--gPV~v~~~~~~~-~f 249 (324)
|++..|++|+.+ .||++|++|||.+.++.|. . .....++|++|..++..++++|+++|+. |||+|+|+++.. +|
T Consensus 154 G~~~~a~~yi~~-~Gi~~e~~yPY~~~~~~C~-~-~~~~~~~i~~y~~v~~~~~~~ik~al~~~~GPV~v~i~~~~~~~f 230 (312)
T 1xkg_A 154 DTIPRGIEYIQH-NGVVQESYYRYVAREQSCR-R-PNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAF 230 (312)
T ss_dssp CCHHHHHHHHHH-HCEEBGGGSCCCSSCCCCC-C-CSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHH
T ss_pred CCHHHHHHHHHH-cCCCccccCCccCCCCCCC-C-CCCceEEEeeEEEeCCCCHHHHHHHHHhcCCCEEEEEEecccccc
Confidence 999999999987 5999999999999999998 4 3446788999999987789999999985 999999999943 89
Q ss_pred ccccCCeeeCC-CC-C-CCCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 250 QFYSSGVFTGD-CG-T-ELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 250 ~~y~~Giy~~~-~~-~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
++|++|||..+ |. . . +|||+|||||++ +|++|||||||||++||++|||||+|+. |.|||++.++||++
T Consensus 231 ~~Y~~GVy~~~~c~~~~~-~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~----n~CgI~~~~~~~~~ 302 (312)
T 1xkg_A 231 RHYDGRTIIQRDNGYQPN-YHAVNIVGYSNA-QGVDYWIVRNSWDTNWGDNGYGYFAANI----DLMMIEEYPYVVIL 302 (312)
T ss_dssp HTCCSSSCBCCCCSSCCE-EEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTCCEEEEC
T ss_pred cccCCcEEcCCCCCCCcC-ceEEEEEEEecc-CCceEEEEEeCCCCcccCCcEEEEEcCC----CcccccceeEEeec
Confidence 99999999986 76 4 6 999999999988 7999999999999999999999999984 46999999999985
No 10
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=2.6e-72 Score=535.93 Aligned_cols=278 Identities=30% Similarity=0.547 Sum_probs=184.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCeEEE-cccCCCCCHHHHHHhhcCccCCCCCCCCC-CCcccccCCCCCCceeec
Q 047793 35 EEKEKRFRIFKDNVEFIESLNAAGNKPYKLS-INEFADQTNQEFKAFRNGYRRPDGLTSRK-GTSFKYENVIDVPATMDW 112 (324)
Q Consensus 35 ~e~~~r~~~f~~n~~~I~~~N~~~~~s~~~g-~N~fsd~t~~E~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~lP~~~Dw 112 (324)
.|+.+|+.||++|+++|++||++ ..+|++| +|+|+|||.+||++++++.+.+...+... ..........+||++|||
T Consensus 135 ~~~~~R~~if~~N~~~I~~~N~~-~~~~~~~~~n~faDlT~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~s~Dw 213 (441)
T 3pdf_A 135 SQEKYSNRLYKYDHNFVKAINAI-QKSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQKILFLPTSWDW 213 (441)
T ss_dssp ------------------------------------------------------------------------CCCSCEET
T ss_pred hhHHHHHHHHHHHHHHHHHHHcc-CCceEeecccccccCCHHHHHHHhCCCcccccccccCccccccccccccCCCCEEC
Confidence 46789999999999999999985 4689998 89999999999999876654322110000 011111233579999999
Q ss_pred ccCC---CCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCc--cCCHHHHhhhcCCCCCCCCCCCchHHH-HHHHHHhC
Q 047793 113 RKNG---AVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLI--SLSEQELVSCDTSGVDHGCEGGEMEDA-FKFIIHND 186 (324)
Q Consensus 113 r~~g---~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~--~lS~q~l~~c~~~~~~~gc~gG~~~~a-~~~~~~~~ 186 (324)
|+++ +||||||||.||||||||++++||++++|+++..+ .||||+|+||+.. +.||+||.+..+ ++|+.+.
T Consensus 214 R~~~g~~~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~~--~~GC~GG~~~~aa~~yi~~~- 290 (441)
T 3pdf_A 214 RNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQY--AQGCEGGFPYLIAGKYAQDF- 290 (441)
T ss_dssp TCBTTBCCSCCCCBCTTSBCHHHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCTT--SCTTBCCCHHHHTTHHHHHT-
T ss_pred CcCCCCCccCcccccCCCchHHHHHHHHHHHHHHHHhccCCCccccCHHHHHhhccC--CCCCCCCchhHHHHHHHHhc-
Confidence 9964 89999999999999999999999999999998765 4999999999864 789999999987 8999765
Q ss_pred CcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcC----CCcHHHHHHHHH-cCCeEEEEeccCCccccccCCeeeCC-
Q 047793 187 GITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVP----ANSEEALLKAVA-NQPVAVSIDASGSAFQFYSSGVFTGD- 260 (324)
Q Consensus 187 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~----~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Giy~~~- 260 (324)
||++|++|||.+.++.|... .......+.+|..++ ..++++|+.+|+ +|||+|+|+++ ++|++|++|||.++
T Consensus 291 Gi~tE~~yPY~~~~~~C~~~-~~~~~~~~~~y~~v~~~~~~~~e~~ik~al~~~GPVsvai~a~-~~F~~Y~sGVy~~~~ 368 (441)
T 3pdf_A 291 GLVEEACFPYTGTDSPCKMK-EDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVY-DDFLHYKKGIYHHTG 368 (441)
T ss_dssp CBCBGGGSCCCSSCCCSCCC-SSCCCBCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEEEECCC-GGGGGCCSSEECCC-
T ss_pred CCCcHHHeeecccCCCCCCc-cccceeeeccEEEeCCccCCCcHHHHHHHHHHCCCeEEEEEec-ccccccCCceEecCC
Confidence 99999999999999999875 334556778888885 357899999998 79999999998 79999999999887
Q ss_pred CC------CCCCeEEEEeeeccc-CCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCccccccccee
Q 047793 261 CG------TELDHGVTAVGYGAT-ANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYP 322 (324)
Q Consensus 261 ~~------~~~~Hav~iVGyg~~-~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p 322 (324)
|. ..++|||+|||||++ ++|++|||||||||++|||+|||||+|+.+ .|||++.++++
T Consensus 369 ~~~~~~~~~~~~HaV~iVGyG~~~~~G~~YWIVkNSWG~~WGe~GYfri~rg~n----~CGI~s~~~a~ 433 (441)
T 3pdf_A 369 LRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTD----ECAIESIAVAA 433 (441)
T ss_dssp --CCCCCCCCCCEEEEEEEEEECTTTCCEEEEEECSBCTTSTBTTEEEEECSSC----GGGTTSCCEEE
T ss_pred CCcccCCCCcCCeEEEEEEecccCCCCceEEEEEcCCCCCcCCCeEEEEEcCCC----ccCCCCceEEe
Confidence 32 248999999999986 478999999999999999999999999973 59999998754
No 11
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=3.8e-71 Score=511.21 Aligned_cols=274 Identities=24% Similarity=0.470 Sum_probs=183.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeEEEcc-cCCCCCHHHHHHhhcCccCCCCC-CCCCCCcccc-cCCCCCCceeeccc
Q 047793 38 EKRFRIFKDNVEFIESLNAAGNKPYKLSIN-EFADQTNQEFKAFRNGYRRPDGL-TSRKGTSFKY-ENVIDVPATMDWRK 114 (324)
Q Consensus 38 ~~r~~~f~~n~~~I~~~N~~~~~s~~~g~N-~fsd~t~~E~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~lP~~~Dwr~ 114 (324)
+.|+..+..+.++|++||++.+.+|++|+| +|+|||.+||++++ +..+.... .......+.. ....+||++||||+
T Consensus 2 ~~~~~a~~~~~~~i~~~N~~~~~~~~~~~n~~f~dlt~eE~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DwR~ 80 (325)
T 3hhi_A 2 LVAEDAPVLSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRLN-GVIKKNNNASILPKRRFTEEEARAPLPSSFDSAE 80 (325)
T ss_dssp -------------------------------------------------------CCSCBCCCCHHHHHCCCCSCEEHHH
T ss_pred CcccccccccHHHHHHHHhCCCCceEEecccccccCCHHHHHHHh-CCCCCCcccccccCccccccccccCCCCcEehhH
Confidence 357788889999999999876679999999 89999999999864 33321110 0000111211 11247999999999
Q ss_pred C----CCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCC-CccCCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHhCCcC
Q 047793 115 N----GAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGK-LISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHNDGIT 189 (324)
Q Consensus 115 ~----g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~-~~~lS~q~l~~c~~~~~~~gc~gG~~~~a~~~~~~~~Gi~ 189 (324)
+ |.||||||||.||||||||++++||++++|+++. .++||||+|+||+.. .+.||+||++..|++|+.++ |++
T Consensus 81 ~w~~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~~~~~~~LSeQ~LvdC~~~-~~~GC~GG~~~~A~~yi~~~-Gi~ 158 (325)
T 3hhi_A 81 AWPNCPTIPQIADQSACGSCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCSD-CGDGCNGGDPDRAWAYFSST-GLV 158 (325)
T ss_dssp HSTTCTTTTCCCBCCSSBCHHHHHHHHHHHHHHHHTSSCSSCCBCHHHHHHHCGG-GBCTTBCBCHHHHHHHHHHT-CBC
T ss_pred hcCCCCccccccCCCCccccHHHHHHHHHHHHHHHHhCCCccccCHHHHHHhccC-CCCCCCCCCHHHHHHHHHHh-CCC
Confidence 8 8999999999999999999999999999999987 899999999999874 36899999999999999876 999
Q ss_pred CCCccccc-CC----------CCcccCC---------------CCCCceEEEeeeEEcCCCcHHHHHHHHH-cCCeEEEE
Q 047793 190 TEANYPYQ-AV----------DGTCNKT---------------NEASHVAKIKGYETVPANSEEALLKAVA-NQPVAVSI 242 (324)
Q Consensus 190 ~e~~yPY~-~~----------~~~c~~~---------------~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPV~v~~ 242 (324)
+|++|||. +. .+.|... ........+..|. + .++++|+++|+ +|||+|+|
T Consensus 159 ~e~~yPY~~~~c~~~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~y~-v--~~~~~i~~~i~~~GPV~v~i 235 (325)
T 3hhi_A 159 SDYCQPYPFPHCSHHSKSKNGYPPCSQFNFDTPKCDYTCDDPTIPVVNYRSWTSYA-L--QGEDDYMRELFFRGPFEVAF 235 (325)
T ss_dssp BTTTSCCSSCCCBSSSCCTTCCCBGGGCCCCCCCCCSSCSSTTSCCCCBCEEEEEE-E--CSHHHHHHHHHHHCCEEEEE
T ss_pred cccccCCccccccccccccccCCCCCCcccCCcchhhcccccccccceEEeecceE-e--CCHHHHHHHHHHCCCEEEEE
Confidence 99999998 32 2566510 0011233566776 5 68999999997 79999999
Q ss_pred eccCCccccccCCeeeCCCCC-CCCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccce
Q 047793 243 DASGSAFQFYSSGVFTGDCGT-ELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSY 321 (324)
Q Consensus 243 ~~~~~~f~~y~~Giy~~~~~~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~ 321 (324)
+++ ++|++|++|||..++.. .++|||+|||||++ +|++|||||||||++||++|||||+|+. |.|||++.+++
T Consensus 236 ~~~-~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~-~g~~YWivkNSWG~~WGe~GY~~i~rg~----n~CGI~~~~~~ 309 (325)
T 3hhi_A 236 DVY-EDFIAYNSGVYHHVSGQYLGGHAVRLVGWGTS-NGVPYWKIANSWNTEWGMDGYFLIRRGS----SECGIEDGGSA 309 (325)
T ss_dssp EEE-HHHHTCCSSEECCCSCCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTSCEEE
T ss_pred Eec-cccccccCceecCCCCCCCCCEEEEEEEEEec-CCceEEEEEeCCCCCcccCCEEEEEcCC----CeecCccceEE
Confidence 998 79999999999988654 46999999999987 7999999999999999999999999997 35999999987
Q ss_pred ee
Q 047793 322 PT 323 (324)
Q Consensus 322 p~ 323 (324)
++
T Consensus 310 g~ 311 (325)
T 3hhi_A 310 GI 311 (325)
T ss_dssp EE
T ss_pred ee
Confidence 64
No 12
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=2.6e-68 Score=468.65 Aligned_cols=217 Identities=57% Similarity=1.059 Sum_probs=199.6
Q ss_pred CCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHh
Q 047793 106 VPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHN 185 (324)
Q Consensus 106 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~gG~~~~a~~~~~~~ 185 (324)
||++||||++|.||||||||.||||||||++++||+++++++++.++||||+|++|+...++.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~i~~~~~~~LS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 80 (220)
T 3p5u_A 1 LPDYVDWRSSGAVVDIKDQGQCGSAWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGGFMTDGFQFIINN 80 (220)
T ss_dssp CCSCEETTTTTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCCSSCCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCcCCcCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHhHcEECCCCCCCCCCCCCCHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999986557899999999999999988
Q ss_pred CCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHHcCCeEEEEeccCCccccccCCeeeCCCCCCC
Q 047793 186 DGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQFYSSGVFTGDCGTEL 265 (324)
Q Consensus 186 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~ 265 (324)
.|+++|++|||...++.|.........+++++|..++..++++|+++|.+|||+|+|++..++|++|++|||.++|....
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~l~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~~~ 160 (220)
T 3p5u_A 81 GGINTEANYPYTAEEGQCNLDLQQEKYVSIDTYENVPYNNEWALQTAVAYQPVSVALEAAGYNFQHYSSGIFTGPCGTAV 160 (220)
T ss_dssp TCBCBTTTSCCCSSCCCCCHHHHTCCSBCCCEEEECCTTCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCCCSC
T ss_pred CCcCcccccccccCCCCcCcCCCCCceEEEccEEEeCCCcHHHHHHHHhcCCEEEEEecCchhhccccCceECCCCCCcc
Confidence 79999999999999899985433334578899999987889999999989999999999767899999999998888889
Q ss_pred CeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 266 DHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 266 ~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
+|||+|||||++ +|++|||||||||++||++|||||+|+.++ .|.|||++.++||++
T Consensus 161 ~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~-~~~Cgi~~~~~~p~~ 217 (220)
T 3p5u_A 161 DHAVTIVGYGTE-GGIDYWIVKNSWGTTWGEEGYMRIQRNVGG-VGQCGIAKKASYPVK 217 (220)
T ss_dssp CEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECCCCT-TCGGGTTSSCEEEEC
T ss_pred ceEEEEEEEecC-CCceEEEEECCCCCCcccCCEEEEECCCCC-CCccCcccccceEEE
Confidence 999999999977 789999999999999999999999999863 368999999999985
No 13
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=9.3e-68 Score=465.16 Aligned_cols=216 Identities=57% Similarity=1.110 Sum_probs=199.1
Q ss_pred CCCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCCCCchHHHHHHHHH
Q 047793 105 DVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIH 184 (324)
Q Consensus 105 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~gG~~~~a~~~~~~ 184 (324)
+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|++|... +.||+||++..|++|+.+
T Consensus 2 ~lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~--~~gC~GG~~~~a~~y~~~ 79 (221)
T 1cqd_A 2 DLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTA--NHGCRGGWMNPAFQFIVN 79 (221)
T ss_dssp -CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT--SCTTBCCCHHHHHHHHHH
T ss_pred CCCCcCcCCCCCCcCCcccCCCCccHHHHHHHHHHHHHHHHhcCCeeeeccceeEECCCC--CCCCCCCCHHHHHHHHHH
Confidence 589999999999999999999999999999999999999999999999999999999864 689999999999999998
Q ss_pred hCCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHHcCCeEEEEeccCCccccccCCeeeCCCCCC
Q 047793 185 NDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQFYSSGVFTGDCGTE 264 (324)
Q Consensus 185 ~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~ 264 (324)
+.|+++|++|||...++.|... .....++|++|..++..++++|+++|++|||+|+|++..++|++|++|||..+|...
T Consensus 80 ~~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~~ 158 (221)
T 1cqd_A 80 NGGINSEETYPYRGQDGICNST-VNAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNIS 158 (221)
T ss_dssp HTSBCBTTTSCCCSSCCCCCSS-SCCCSBCCSEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCCCC
T ss_pred hCCccccccCCccCCCCCcCCC-CCCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEeccCcccccccCccccCCCCCc
Confidence 7799999999999998999875 334567899999998778999999999999999999986689999999999888888
Q ss_pred CCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 265 LDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 265 ~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
++|||+|||||++ +|++|||||||||++||++|||||+|+.++..|.|||+++++||++
T Consensus 159 ~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 217 (221)
T 1cqd_A 159 ANHALTVVGYGTE-NDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPVK 217 (221)
T ss_dssp CCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred CCeEEEEEEEccc-CCCcEEEEEeCCCCCcccCCEEEEEcCCCCCCcccceeeeeeEEEe
Confidence 9999999999998 7899999999999999999999999997544478999999999985
No 14
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=8.7e-68 Score=463.77 Aligned_cols=215 Identities=52% Similarity=1.017 Sum_probs=197.8
Q ss_pred CCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHh
Q 047793 106 VPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHN 185 (324)
Q Consensus 106 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~gG~~~~a~~~~~~~ 185 (324)
||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|++|.. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~yi~~~ 78 (216)
T 1ppo_A 1 LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER--RSHGCKGGYPPYALEYVAKN 78 (216)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS--SSCTTBCCCHHHHHHHHHHH
T ss_pred CCCcCcCCCCCCCCCCccCCcCccHHHHHHHHHHHHHHHHccCCceecCHHHHHhccC--CCCCCCCCCHHHHHHHHHHh
Confidence 7999999999999999999999999999999999999999999999999999999986 37899999999999999877
Q ss_pred CCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHHcCCeEEEEeccCCccccccCCeeeCCCCCCC
Q 047793 186 DGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQFYSSGVFTGDCGTEL 265 (324)
Q Consensus 186 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~ 265 (324)
|+++|++|||...++.|.........+++++|..++..+++.|+++|++|||+|+|+++.++|++|++|||..+|+...
T Consensus 79 -Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~~~ 157 (216)
T 1ppo_A 79 -GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKV 157 (216)
T ss_dssp -CBCBTTTSCCCSSCCCCCGGGCCSCCBCCCEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHHCCSSEECCSCCSCC
T ss_pred -CcCccccCCccCCCCCcCCCCCCCceEEeccEEEECCCCHHHHHHHHHhCCEEEEEecCChhhhhcCCceECCCCCCCC
Confidence 8999999999998899986533345678999999987789999999999999999999757899999999998888888
Q ss_pred CeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 266 DHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 266 ~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
+|||+|||||++ +|++|||||||||++||++|||||+|+.++..|.|||+++++||++
T Consensus 158 ~HaV~iVGyg~~-~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~n~Cgi~~~~~~p~~ 215 (216)
T 1ppo_A 158 DHAVTAVGYGKS-GGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 215 (216)
T ss_dssp CEEEEEEEEEEE-TTEEEEEEECSBCSSSTBTTEEEEECCCSSSSCGGGTTSCCEEEEC
T ss_pred CEEEEEEEeecc-CCccEEEEEeCCCCCcccCcEEEEEcCCCCCCCcCccccceeeEee
Confidence 999999999998 6899999999999999999999999997544578999999999985
No 15
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=1.9e-67 Score=461.09 Aligned_cols=214 Identities=57% Similarity=1.099 Sum_probs=197.8
Q ss_pred CCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHh
Q 047793 106 VPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHN 185 (324)
Q Consensus 106 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~gG~~~~a~~~~~~~ 185 (324)
||++||||++|+|+||||||.||||||||+++++|++++++++..++||+|+|++|... +.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~~e~~~~i~~g~~~~lS~q~l~dC~~~--~~gC~GG~~~~a~~~~~~~ 78 (215)
T 1iwd_A 1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTA--SHGCNGGWMNNAFQYIITN 78 (215)
T ss_dssp CCSCEEGGGGTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT--SCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHhcCCccccChhHeEECcCC--CCCCCCCCHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999864 7899999999999999877
Q ss_pred CCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHHcCCeEEEEeccCCccccccCCeeeCCCCCCC
Q 047793 186 DGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQFYSSGVFTGDCGTEL 265 (324)
Q Consensus 186 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~ 265 (324)
.|+++|++|||...++.|.... ...+++++|..++..++++|+++|++|||+|+|++..++|+.|++|||..+|...+
T Consensus 79 ~Gi~~e~~yPY~~~~~~C~~~~--~~~~~i~~~~~v~~~~~~~ik~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~~ 156 (215)
T 1iwd_A 79 GGIDTQQNYPYSAVQGSCKPYR--LRVVSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTGPCGTAQ 156 (215)
T ss_dssp TCBCBTTTSCCCSSCCCCCTTC--CCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCCCC
T ss_pred CCcccccccCccCCCCCCCCCC--CceEEeCcEEEeCCCcHHHHHHHHHhCCEEEEEecCCcchhhcCCceECCCCCCcC
Confidence 7999999999999989998753 35678899999987789999999999999999999855899999999998888888
Q ss_pred CeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 266 DHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 266 ~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
+|||+|||||++ +|++|||||||||++||++|||||+|+.++..|.|||+++++||++
T Consensus 157 ~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 214 (215)
T 1iwd_A 157 NHGVVIVGYGTQ-SGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPTK 214 (215)
T ss_dssp CEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred CEEEEEEEEecc-CCccEEEEEeCCCCCcCCCcEEEEEcCCCCCCCCCCccccceeeee
Confidence 999999999998 7899999999999999999999999997544468999999999985
No 16
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=2e-67 Score=462.05 Aligned_cols=215 Identities=51% Similarity=1.023 Sum_probs=197.4
Q ss_pred CCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHh
Q 047793 106 VPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHN 185 (324)
Q Consensus 106 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~gG~~~~a~~~~~~~ 185 (324)
||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|++|.. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~~~~~~ 78 (218)
T 1yal_A 1 YPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDK--HSYGCKGGYQTTSLQYVANN 78 (218)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHH
T ss_pred CCCcCcCCCCCCCCCCccCccchhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhcC--CCCCCCCCCHHHHHHHHHHc
Confidence 7999999999999999999999999999999999999999999999999999999984 47899999999999999877
Q ss_pred CCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHHcCCeEEEEeccCCccccccCCeeeCCCCCCC
Q 047793 186 DGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQFYSSGVFTGDCGTEL 265 (324)
Q Consensus 186 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~ 265 (324)
|+++|++|||...++.|.........+++++|..++..+++.|+++|++|||+++|+++.++|++|++|||..+|+..+
T Consensus 79 -Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~ 157 (218)
T 1yal_A 79 -GVHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSGVFDGPCGTKL 157 (218)
T ss_dssp -CBCBTTTSCCCSSCCCCCGGGCCSCCBCCSEEEECCSSBHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCSCC
T ss_pred -CCCccccccccCCCCCcccCcCCCceEEEeeEEEeCCCCHHHHHHHHHhCCEEEEEeccchhccccCCceECCCCCCCC
Confidence 8999999999998889986533345678999999987789999999999999999999757899999999998888888
Q ss_pred CeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 266 DHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 266 ~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
+|||+|||||++ +|++|||||||||++||++|||||+|+.++..|.|||++.++||++
T Consensus 158 ~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 215 (218)
T 1yal_A 158 DHAVTAVGYGTS-DGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYPFK 215 (218)
T ss_dssp CEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECCCSBSCCGGGTTSSCEEEEC
T ss_pred CEEEEEEEeecc-CCccEEEEEeCCCCCcccCcEEEEECCCCCCCCccccccceeeEEE
Confidence 999999999998 6899999999999999999999999997544478999999999985
No 17
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=1.2e-67 Score=473.87 Aligned_cols=220 Identities=60% Similarity=1.142 Sum_probs=200.7
Q ss_pred CCCCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCCCCchHHHHHHHH
Q 047793 104 IDVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFII 183 (324)
Q Consensus 104 ~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~gG~~~~a~~~~~ 183 (324)
.+||++||||++|+|+||||||.||||||||++++||++++|+++..++||+|+|++|... .+.||+||++..|++|+.
T Consensus 2 ~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~lvdC~~~-~~~GC~GG~~~~a~~yi~ 80 (262)
T 2fo5_A 2 SDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTA-DNDGCQGGLMDNAFEYIK 80 (262)
T ss_dssp -CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCS-SCCGGGCBCHHHHHHHHH
T ss_pred CCCCCcccCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhcCC-CCCCCCCCCHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999863 478999999999999998
Q ss_pred HhCCcCCCCcccccCCCCcccCCC--CCCc-eEEEeeeEEcCCCcHHHHHHHHHcCCeEEEEeccCCccccccCCeeeCC
Q 047793 184 HNDGITTEANYPYQAVDGTCNKTN--EASH-VAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQFYSSGVFTGD 260 (324)
Q Consensus 184 ~~~Gi~~e~~yPY~~~~~~c~~~~--~~~~-~~~i~~~~~~~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~ 260 (324)
++.|+++|++|||...++.|.... .... .++|++|..++..+++.|+++|++|||+++|+++.++|++|++|||..+
T Consensus 81 ~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~i~~y~~v~~~~e~~ik~al~~GPV~v~i~~~~~~f~~Y~sGVy~~~ 160 (262)
T 2fo5_A 81 NNGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGE 160 (262)
T ss_dssp HTTCEEBTTTSCCCSSCCCCCHHHHHHHCCCEECCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCC
T ss_pred HcCCcCchhcCCCcCccCccCCcccccCCceeEEeceEEEcCCchHHHHHHHHHhCCEEEEEecChHHHhccCCceECCC
Confidence 777999999999999989998642 1234 6789999999877899999999999999999998668999999999988
Q ss_pred CCCCCCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 261 CGTELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 261 ~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
|+...+|||+|||||++.+|++|||||||||++||++|||||+|+.++..|+|||++.++||++
T Consensus 161 c~~~~~HaV~IVGyg~~~~G~~YWivkNSWG~~WGe~GY~ri~r~~n~~~~~CgI~~~~~~p~~ 224 (262)
T 2fo5_A 161 CGTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVK 224 (262)
T ss_dssp CCCCCCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEESSCSCTTCGGGTTTSCEEEEC
T ss_pred CCCcCCEEEEEEEEcccCCCceEEEEEeCCCCCCCCCeEEEEEcCCCCCCCccceeeeeeEEEe
Confidence 8888899999999998756899999999999999999999999998765688999999999985
No 18
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=2.9e-67 Score=464.27 Aligned_cols=219 Identities=67% Similarity=1.193 Sum_probs=199.0
Q ss_pred CCCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCCCCchHHHHHHHHH
Q 047793 105 DVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIH 184 (324)
Q Consensus 105 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~gG~~~~a~~~~~~ 184 (324)
+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|++|... .+.||+||++..|++|+.+
T Consensus 1 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~-~~~gC~GG~~~~a~~y~~~ 79 (229)
T 1s4v_A 1 TVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTD-QNQGCNGGLMDYAFEFIKQ 79 (229)
T ss_dssp CCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCS-SCCTTBCBCHHHHHHHHHH
T ss_pred CCCCCEeCCCCCCCCCCccCccchHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhCCC-CCCCCCCCCHHHHHHHHHH
Confidence 489999999999999999999999999999999999999999999999999999999863 3689999999999999987
Q ss_pred hCCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHHcCCeEEEEeccCCccccccCCeeeCCCCCC
Q 047793 185 NDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQFYSSGVFTGDCGTE 264 (324)
Q Consensus 185 ~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~ 264 (324)
+.|+++|++|||....+.|.........+++++|..++..+++.|+++|++|||+|+|++..++|++|++|||..+|+..
T Consensus 80 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~c~~~ 159 (229)
T 1s4v_A 80 RGGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTE 159 (229)
T ss_dssp HTCBCBTTTSCCCSSCCCCCHHHHTCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCCC
T ss_pred hCCccccccCCccCCCCCCCCCCCCCcEEEeeeEEEeCCccHHHHHHHHhcCCEEEEEEeCcHHHhhCCCcEECCCCCCC
Confidence 77999999999999888997542233567889999998778999999999999999999955789999999999888888
Q ss_pred CCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 265 LDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 265 ~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
++|||+|||||++.+|++|||||||||++||++|||||+|+.++..|.|||++.++||++
T Consensus 160 ~~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 219 (229)
T 1s4v_A 160 LDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIK 219 (229)
T ss_dssp CCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred CCeEEEEEEeccccCCCCEEEEEeCCCCCccCCcEEEEEcCCCCCCCcCcccccceeeEe
Confidence 899999999999855899999999999999999999999997544578999999999985
No 19
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=2.9e-67 Score=484.40 Aligned_cols=263 Identities=29% Similarity=0.551 Sum_probs=209.5
Q ss_pred HHHHHHHHhcCCCCCeEEEcccCCCCCHHHHHHhhcCccCCCCCCCCCCCcccccCCCCCCceeecccC----CCCCccc
Q 047793 47 NVEFIESLNAAGNKPYKLSINEFADQTNQEFKAFRNGYRRPDGLTSRKGTSFKYENVIDVPATMDWRKN----GAVTPIK 122 (324)
Q Consensus 47 n~~~I~~~N~~~~~s~~~g~N~fsd~t~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~----g~v~pV~ 122 (324)
+.++|++||++ +.+|++|+| |+|++.||++.+ ++.++.... . ...+......+||++||||++ +.|+|||
T Consensus 11 ~~~~i~~~N~~-~~~~~~~~n-f~~~~~e~~~~~-lg~~~~~~~--~-~~~~~~~~~~~lP~s~DwR~~~~~c~~vtpVk 84 (317)
T 3pbh_A 11 SDELVNYVNKR-NTTWQAGHN-FYNVDMSYLKRL-CGTFLGGPK--P-PQRVMFTEDLKLPASFDAREQWPQCPTIKEIR 84 (317)
T ss_dssp CHHHHHHHHHH-TCSEEECCC-CSSCCHHHHHHT-CCBCTTCCC--C-SEEECCCSCCCCCSSEEHHHHCTTCGGGTCCC
T ss_pred cHHHHHHHHCC-CCCeEEeec-cccCCHHHHHHH-cCCCCCccc--c-CcccccccccCCCCCEechhccCCCCCcCCcc
Confidence 45789999974 679999999 999998877664 555433221 1 111222223579999999987 6899999
Q ss_pred CCCCCcchHHHHHHHHHhHHHHhhcCC--CccCCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHhCCcCCCCcc------
Q 047793 123 NQGPCGSCWAFSAVAATEGITQLTTGK--LISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHNDGITTEANY------ 194 (324)
Q Consensus 123 dQg~cGsCwAfA~~~~le~~~~~~~~~--~~~lS~q~l~~c~~~~~~~gc~gG~~~~a~~~~~~~~Gi~~e~~y------ 194 (324)
|||.||||||||++++||++++|+++. .+.||+|+|+||+....+.||+||++..|++|+.++ ||++|.+|
T Consensus 85 dQg~CGSCWAFsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~~~GC~GG~~~~A~~yi~~~-Gi~te~~Y~~~~~c 163 (317)
T 3pbh_A 85 DQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRK-GLVSGGLYESHVGC 163 (317)
T ss_dssp BCCSSCCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTTBCGGGCBCHHHHHHHHHHT-CEEBBCSTTCCCBS
T ss_pred ccCCccchHHHHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccccCCCCCCCCCHHHHHHHHHHh-CCCcchhccCCCCC
Confidence 999999999999999999999999875 789999999999873346899999999999999876 99999888
Q ss_pred -cccC---------CCCcccCCCCC-------Cc---------eEEEeeeEEcCCCcHHHHHHHHH-cCCeEEEEeccCC
Q 047793 195 -PYQA---------VDGTCNKTNEA-------SH---------VAKIKGYETVPANSEEALLKAVA-NQPVAVSIDASGS 247 (324)
Q Consensus 195 -PY~~---------~~~~c~~~~~~-------~~---------~~~i~~~~~~~~~~~~~i~~~l~-~gPV~v~~~~~~~ 247 (324)
||.. ..+.|...... .. .........++ .++++|+++|+ +|||+|+|+++ +
T Consensus 164 ~PY~~~~c~~~~~~~~~~C~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v~-~~e~~i~~~i~~~GPV~v~i~~~-~ 241 (317)
T 3pbh_A 164 RPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVS-NSEKDIMAEIYKNGPVEGAFSVY-S 241 (317)
T ss_dssp SCCCSCCCCCCCTTCCSCCCSCCCCCCCCCSCCSSCCSCGGGSEECBCCCEEEC-SCHHHHHHHHHHHCCEEEEEEEE-G
T ss_pred cCcccCcccccccCcCCCCCCcCCCCcccccccCCCccceeeeeeeeeecccCC-cHHHHHHHHHHHCCCEEEEEEec-c
Confidence 9984 33455421000 00 00111223454 57899999998 79999999998 7
Q ss_pred ccccccCCeeeCCCCC-CCCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceee
Q 047793 248 AFQFYSSGVFTGDCGT-ELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPT 323 (324)
Q Consensus 248 ~f~~y~~Giy~~~~~~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~ 323 (324)
+|++|++|||.++|+. .++|||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||++.++.++
T Consensus 242 ~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~-~g~~YWivkNSWG~~WGe~GY~ri~rg~----n~CgI~~~~~a~~ 313 (317)
T 3pbh_A 242 DFLLYKSGVYQHVTGEMMGGHAIRILGWGVE-NGTPYWLVANSWNTDWGDNGFFKILRGQ----DHCGIESEVVAGI 313 (317)
T ss_dssp GGGGEEEEEECCCSCCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTSCEECC
T ss_pred cccCCCCcEEccCCCCCCCCEEEEEEEEEEe-CCeeEEEEEcCCCCCcCCCcEEEEEcCC----CcccCCCceEeee
Confidence 9999999999998765 45999999999987 7999999999999999999999999997 3599999987653
No 20
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=3.1e-67 Score=462.30 Aligned_cols=214 Identities=52% Similarity=1.045 Sum_probs=192.6
Q ss_pred CCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHh
Q 047793 106 VPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHN 185 (324)
Q Consensus 106 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~gG~~~~a~~~~~~~ 185 (324)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||||+|++|... +.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGSCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~--~~gC~GG~~~~a~~~~~~~ 78 (222)
T 3u8e_A 1 APASIDWRKKGAVTSVKDQGACGMCWAFGATGAIEGIDAITTGRLISVSEQQIVDCDTX--XXXXXGGDADDAFRWVITN 78 (222)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSCSSCTTTTHHHHHHHHHHHHHSCCCCBCHHHHHHHCC--------CCCHHHHHHHHHHH
T ss_pred CCCcCcCCcCCCCCCcccCCCCccHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhccCc--ccccCCCCHHHHHHHHHHc
Confidence 79999999999999999999999999999999999999999999999999999999875 7899999999999999877
Q ss_pred CCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHHcCCeEEEEeccCCccccccC-CeeeC-CCCC
Q 047793 186 DGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQFYSS-GVFTG-DCGT 263 (324)
Q Consensus 186 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~-Giy~~-~~~~ 263 (324)
.|+++|++|||...++.|...... .++|++|..++ .++++|+++|.+|||+|+|+++..+|++|++ |||.. +|..
T Consensus 79 ~Gi~~e~~yPY~~~~~~C~~~~~~--~~~i~~~~~v~-~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~~Giy~~~~~~~ 155 (222)
T 3u8e_A 79 GGIASDANYPYTGVDGTCDLNKPI--AARIDGYTNVP-NSSSALLDAVAKQPVSVNIYTSSTSFQLYTGPGIFAGSSCSD 155 (222)
T ss_dssp TCBCBTTTSCCCSSCCCCCCCSCC--CBCCCEEEECC-SCHHHHHHHHHHSCEEEEECCCSHHHHTCCCSSCBCCTTCCC
T ss_pred CCccchhcCCCcccCCccccCCCC--eEEEccEEEeC-CcHHHHHHHHhCCCEEEEEEecChhhhcEeCCceECCCcccC
Confidence 799999999999999999876332 77889999998 7899999999999999999998558999999 99998 4776
Q ss_pred ---CCCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 264 ---ELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 264 ---~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
.++|||+|||||++.++++|||||||||++||++|||||+|+.+++.|.|||+++++||++
T Consensus 156 ~~~~~~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~g~Cgi~~~~~~p~~ 219 (222)
T 3u8e_A 156 DPATVDHTVLIVGYGSNGTNADYWIVKNSWGTEWGIDGYILIRRNTNRPDGVCAIDAWGSYPTK 219 (222)
T ss_dssp CGGGCCEEEEEEEEEESSTTCEEEEEECSBCTTSTBTTEEEEECSCSCTTCGGGTTSSCEEEEC
T ss_pred CCCcCCEEEEEEEEeecCCCCcEEEEECCCCCCcccCCEEEEEcCCCCCCCcCCccccceEEEE
Confidence 6899999999998744899999999999999999999999998766678999999999985
No 21
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=1.3e-66 Score=455.13 Aligned_cols=211 Identities=49% Similarity=0.950 Sum_probs=194.0
Q ss_pred CCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHh
Q 047793 106 VPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHN 185 (324)
Q Consensus 106 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~gG~~~~a~~~~~~~ 185 (324)
||++||||++|+|+||||||.||||||||++++||++++++++..++||||+|++|+. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~CGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~yi~~~ 78 (212)
T 2cio_A 1 IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDR--RSYGCNGGYPWSALQLVAQY 78 (212)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHT
T ss_pred CCCcccCCCCCCCCCCccCCccchHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhCC--CCCCCCCCCHHHHHHHHHHh
Confidence 7999999999999999999999999999999999999999999999999999999986 37899999999999999876
Q ss_pred CCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHHcCCeEEEEeccCCccccccCCeeeCCCCCCC
Q 047793 186 DGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQFYSSGVFTGDCGTEL 265 (324)
Q Consensus 186 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~ 265 (324)
|+++|++|||...++.|.........+++++|..++..+++.|+++|++|||+++|+++.++|++|++|||..+|+..+
T Consensus 79 -Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~~~~~ 157 (212)
T 2cio_A 79 -GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKV 157 (212)
T ss_dssp -CBCBTTTSCCCSSCCCCCTTTTCSCSBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCSCC
T ss_pred -CcCcccccCCcCCCCCcCCCCCCCceEEEeeEEEeCCccHHHHHHHHHhCCEEEEEeccCcchhhcCCceecCCCCCCC
Confidence 8999999999998899987633345678999999987789999999999999999999855899999999998888888
Q ss_pred CeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 266 DHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 266 ~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
+|||+|||||+ +|||||||||++||++|||||+|+.++..|.|||+++++||++
T Consensus 158 ~HaV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (212)
T 2cio_A 158 DHAVAAVGYGP-----NYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVK 211 (212)
T ss_dssp CEEEEEEEEET-----TEEEEECSBCTTSTBTTEEEEECSSSCTTCGGGTTSCCEEEEC
T ss_pred CEEEEEEEecC-----CeEEEEeCCCCCcccCcEEEEEcCCCCCCCccCcccceeEEEe
Confidence 99999999996 7999999999999999999999997544578999999999985
No 22
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=5.1e-67 Score=459.99 Aligned_cols=214 Identities=49% Similarity=0.930 Sum_probs=197.5
Q ss_pred CCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhc-CCCCCCCCCCCchHHHHHHHHH
Q 047793 106 VPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCD-TSGVDHGCEGGEMEDAFKFIIH 184 (324)
Q Consensus 106 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~-~~~~~~gc~gG~~~~a~~~~~~ 184 (324)
||++||||++|+||||||||.||||||||++++||+++++++++.++||+|+|++|. ....+.+|+||++..|++|+.+
T Consensus 2 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~~gC~GG~~~~a~~~~~~ 81 (218)
T 3ovx_A 2 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIID 81 (218)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCCCcccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHcCCccccCHHHheeccCCcCCCCCCCCCCHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999998 4345789999999999999987
Q ss_pred hCCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHH-cCCeEEEEeccCCccccccCCeeeCC-CC
Q 047793 185 NDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVA-NQPVAVSIDASGSAFQFYSSGVFTGD-CG 262 (324)
Q Consensus 185 ~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Giy~~~-~~ 262 (324)
+.|+++|++|||...++.|... ......++.+|..++..++++||++|+ +|||+++|++..++|++|++|||..+ |.
T Consensus 82 ~~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~ 160 (218)
T 3ovx_A 82 NKGIDSDASYPYKAMDQKCQYD-SKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCT 160 (218)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCC-GGGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHHCCSSEECCTTCC
T ss_pred hCCcCcccccCccCCCCcccCC-CccceeeeccEEEeCCCCHHHHHHHHHhcCCEEEEEEecchhhhcccCceecCCCCC
Confidence 7799999999999999999876 345667889999998778999999999 69999999998668999999999987 87
Q ss_pred CCCCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 263 TELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 263 ~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
..++|||+|||||++ +|++|||||||||++||++|||||+|+.+ |.|||++.++||++
T Consensus 161 ~~~~HaV~iVGyg~~-~g~~ywivkNSWG~~WG~~Gy~~i~~~~~---n~cgi~~~~~~p~~ 218 (218)
T 3ovx_A 161 QNVNHGVLVVGYGDL-NGKEYWLVKNSWGHNFGEEGYIRMARNKG---NHCGIASFPSYPEI 218 (218)
T ss_dssp SCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEEEC
T ss_pred cccCcEEEEEEEecc-CCceEEEEECCCCCccccCCEEEEecCCC---CcccccCceeeeeC
Confidence 789999999999988 68999999999999999999999999873 46999999999986
No 23
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=1e-66 Score=457.06 Aligned_cols=212 Identities=49% Similarity=0.950 Sum_probs=196.1
Q ss_pred CCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHh
Q 047793 106 VPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHN 185 (324)
Q Consensus 106 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~gG~~~~a~~~~~~~ 185 (324)
||++||||++|+|+||||||.||||||||+++++|++++++++..++||+|+|++|.. .+.||+||++..|++|+.++
T Consensus 1 lP~~~Dwr~~~~v~pvkdQg~cGsCWAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~--~~~gC~GG~~~~a~~~~~~~ 78 (215)
T 3kwz_A 1 APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQKN 78 (215)
T ss_dssp CTTCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCccCcCCCCCCcccCCCCcHHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC--CCCCCCCCCHHHHHHHHHHh
Confidence 7999999999999999999999999999999999999999999999999999999987 47899999999999999887
Q ss_pred CCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHH-cCCeEEEEeccCCccccccCCeeeCC-CC-
Q 047793 186 DGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVA-NQPVAVSIDASGSAFQFYSSGVFTGD-CG- 262 (324)
Q Consensus 186 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Giy~~~-~~- 262 (324)
.|+++|++|||...++.|... ......++++|..++..++++||++|+ +|||+++|++..++|++|++|||..+ |.
T Consensus 79 ~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~ 157 (215)
T 3kwz_A 79 RGIDSEDAYPYVGQEESCMYN-PTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNS 157 (215)
T ss_dssp TCEEBTTTSCCCSSCCCCCCC-GGGEEECCCCEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCT
T ss_pred CCccccccCCCccCCCccccC-CCCceeEecceEEeCCCCHHHHHHHHHHCCCEEEEEeechhhhhcccCCeECCCCCCC
Confidence 899999999999999999866 345567889999998778999999998 69999999998668999999999877 74
Q ss_pred CCCCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 263 TELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 263 ~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
..++|||+|||||++ ++++|||||||||++||++|||||+|+.+ |+|||++.++||++
T Consensus 158 ~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WG~~Gy~~i~r~~~---n~Cgi~~~~~~p~~ 215 (215)
T 3kwz_A 158 DNLNHAVLAVGYGIQ-KGNKHWIIKNSWGENWGNKGYILMARNKN---NACGIANLASFPKM 215 (215)
T ss_dssp TCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEESSSS---SGGGTTSSCEEECC
T ss_pred ChhhCEEEEEEEecc-CCceEEEEECCcCcccccCCEEEEecCCC---CccCcCCceeeeeC
Confidence 578999999999988 78999999999999999999999999974 46999999999986
No 24
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=1.6e-66 Score=454.94 Aligned_cols=211 Identities=49% Similarity=0.987 Sum_probs=194.7
Q ss_pred CCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHh
Q 047793 106 VPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHN 185 (324)
Q Consensus 106 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~gG~~~~a~~~~~~~ 185 (324)
||++||||++|+||||||||.||||||||++++||+++++++++.++||||+|++|.. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~~~~~~ 78 (213)
T 3ioq_A 1 IPTSIDWRQKGAVTPVRNQGGCGSCWTFSSVAAVEGINKIVTGQLLSLSEQELLDCER--RSYGCRGGFPLYALQYVANS 78 (213)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCCcccCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCcccCHHHhhhhcC--CCCCCCCCCHHHHHHHHHHc
Confidence 7999999999999999999999999999999999999999999999999999999987 37899999999999999987
Q ss_pred CCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHHcCCeEEEEeccCCccccccCCeeeCCCCCCC
Q 047793 186 DGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQFYSSGVFTGDCGTEL 265 (324)
Q Consensus 186 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~ 265 (324)
|+++|++|||.+..+.|.........+++.+|..++..+++.++++|.+|||+|+|+++.++|+.|++|||..+|...+
T Consensus 79 -Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~~~~~~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~ 157 (213)
T 3ioq_A 79 -GIHLRQYYPYEGVQRQCRASQAKGPKVKTDGVGRVPRNNEQALIQRIAIQPVSIVVEAKGRAFQNYRGGIFAGPCGTSI 157 (213)
T ss_dssp -CEEBGGGSCCCSSCCCCCGGGCCSCEECCCEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCSCC
T ss_pred -CCCchhccCcCCCCCCCCCCccCCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEEechhhhhhccCCeEcCCCCCcc
Confidence 9999999999999999986434456788999999987778888888889999999999867899999999999888889
Q ss_pred CeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 266 DHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 266 ~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
+|||+|||||+ +|||||||||++||++|||||+|+.+.+.|.|||+++++||++
T Consensus 158 ~HaV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 211 (213)
T 3ioq_A 158 DHAVAAVGYGN-----DYILIKNSWGTGWGEGGYIRIKRGSGNPQGACGVLSDSVFPTK 211 (213)
T ss_dssp CEEEEEEEEET-----TEEEEECSBCTTSTBTTEEEEESSCSSTTCGGGTTSCCEEEEC
T ss_pred CceEEEEecCC-----CeEEEECCCCCCcccCCeEEEEcCCCCCCCcccccCcceEeEe
Confidence 99999999995 7999999999999999999999998644578999999999985
No 25
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=2.5e-66 Score=453.75 Aligned_cols=211 Identities=52% Similarity=1.046 Sum_probs=195.0
Q ss_pred CCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHh
Q 047793 106 VPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHN 185 (324)
Q Consensus 106 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~gG~~~~a~~~~~~~ 185 (324)
||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||.. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y~~~~ 78 (214)
T 2bdz_A 1 YPESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCER--RSHGCDGGYQTTSLQYVVDN 78 (214)
T ss_dssp CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCBCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCCccCCCCccHHHHHhHHHHHHHHHHhcCCccccCHHHHHhhcC--CCCCCCCCCHHHHHHHHHHh
Confidence 7999999999999999999999999999999999999999999999999999999986 36899999999999999988
Q ss_pred CCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHHcCCeEEEEeccCCccccccCCeeeCCCCCCC
Q 047793 186 DGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQFYSSGVFTGDCGTEL 265 (324)
Q Consensus 186 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~ 265 (324)
|+++|++|||....+.|.........+++++|..++..++++|+++|++|||+|+|++..++|++|++|||..+|...+
T Consensus 79 -Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~ 157 (214)
T 2bdz_A 79 -GVHTEREYPYEKKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGGIYEGPCGTNT 157 (214)
T ss_dssp -CEEBTTTSCCCSSCCCCCTTTCCSCEECCCEEEEECSSBHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCSCCSCC
T ss_pred -CCCccccCCCCCCCCCCCCCCCCCceeeecCEEEeCCCcHHHHHHHHHhCCEEEEEeeChhHhhcccCceecCCCCCCC
Confidence 9999999999998899987643346788999999987789999999999999999999866899999999998888889
Q ss_pred CeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 266 DHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 266 ~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
+|||+|||||+ +|||||||||++||++|||||+|+.++..|.|||++.++||++
T Consensus 158 ~HaV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (214)
T 2bdz_A 158 DHAVTAVGYGK-----TYLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSFFPIK 211 (214)
T ss_dssp CEEEEEEEECS-----SEEEEECSBCTTSTBTTEEEEECCCSBSSCGGGTTSCEEEEEC
T ss_pred CeEEEEEEcCC-----CeEEEEeCCCCCcccCCEEEEEcCCCCCCCcccccccceEEEe
Confidence 99999999996 7999999999999999999999997544478999999999985
No 26
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=3.2e-66 Score=455.34 Aligned_cols=214 Identities=49% Similarity=0.966 Sum_probs=194.8
Q ss_pred CCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHh
Q 047793 106 VPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHN 185 (324)
Q Consensus 106 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~gG~~~~a~~~~~~~ 185 (324)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|++|....++.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~g~~gC~GG~~~~a~~y~~~~ 80 (220)
T 2xu3_A 1 APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDN 80 (220)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTTTCCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCCcccCcccHHHHHHhHHHHHHHHHHhcCCceecCHHHHHhhccCCCCCCCCCCCHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999875557899999999999999766
Q ss_pred CCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHH-cCCeEEEEeccCCccccccCCeeeCC-CCC
Q 047793 186 DGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVA-NQPVAVSIDASGSAFQFYSSGVFTGD-CGT 263 (324)
Q Consensus 186 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Giy~~~-~~~ 263 (324)
.|+++|++|||...++.|... ......++++|..++. ++++||++|+ +|||+|+|++..++|++|++|||..+ |+.
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~~~~~~~~f~~Y~~Gvy~~~~c~~ 158 (220)
T 2xu3_A 81 GGLDSEESYPYEATEESCKYN-PKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSS 158 (220)
T ss_dssp TCEEBTTTSCCCSSCCCCCCC-GGGEEECCSEEEECCS-CHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCS
T ss_pred CCcccccccCCcccCcCccCC-CCCcceeeeeEEEeCC-CHHHHHHHHHhcCCEEEEEeecCcccccccceEEcCCCCCC
Confidence 799999999999998999876 3445678999999985 8999999999 69999999998568999999999987 774
Q ss_pred -CCCeEEEEeeecc---cCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 264 -ELDHGVTAVGYGA---TANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 264 -~~~Hav~iVGyg~---~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
.++|||+|||||+ +++|++|||||||||++||++|||||+|+.+ |.|||++.++||++
T Consensus 159 ~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WG~~Gy~~i~~~~~---n~Cgi~~~~~~p~~ 220 (220)
T 2xu3_A 159 EDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR---NHCGIASAASYPTV 220 (220)
T ss_dssp SCCCEEEEEEEEEECCCSSSCCEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEEEC
T ss_pred CCCCeEEEEEEcCCccccCCCCcEEEEEeCCCCCcccCcEEEEecCCC---CcCCccccceeeeC
Confidence 7899999999994 3368999999999999999999999999874 46999999999985
No 27
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=5.4e-66 Score=449.71 Aligned_cols=207 Identities=61% Similarity=1.099 Sum_probs=191.0
Q ss_pred CCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHh
Q 047793 106 VPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHN 185 (324)
Q Consensus 106 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~gG~~~~a~~~~~~~ 185 (324)
||++||||++|+|+||||||.||||||||++++||++++++++..++||||+|++|.. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y~~~~ 78 (208)
T 1o0e_A 1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDK--KNHGCLGGAFVFAYQYIINN 78 (208)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHH
T ss_pred CCCcCcCCCCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCceecCHHHhhhhcC--CCCCCCCCCHHHHHHHHHHh
Confidence 7999999999999999999999999999999999999999999999999999999986 37899999999999999877
Q ss_pred CCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHHcCCeEEEEeccCCccccccCCeeeCCCCCCC
Q 047793 186 DGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQFYSSGVFTGDCGTEL 265 (324)
Q Consensus 186 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~ 265 (324)
.|+++|++|||...+..|.. ....+++++|..++..+++.|+++|++|||+|+|+++.++|++|++|||..+|+..+
T Consensus 79 ~Gi~~e~~yPY~~~~~~C~~---~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~~ 155 (208)
T 1o0e_A 79 GGIDTQANYPYKAVQGPCQA---ASKVVSIDGYNGVPFCNEXALKQAVAVQPSTVAIDASSAQFQQYSSGIFSGPCGTKL 155 (208)
T ss_dssp TCBCBTTTSCCCSSCCCCCC---CCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCSCC
T ss_pred CCcCcccccCccCCCCcCCC---CCceEEeCeEEEeCCCCHHHHHHHHHhCCEEEEEEccCcccccccCceECCCCCCcC
Confidence 79999999999998899986 234678899999987789999999999999999999855899999999998888888
Q ss_pred CeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 266 DHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 266 ~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
+|||+|||||+ +|||||||||++|||+|||||+|+.+ .|.|||++.++||++
T Consensus 156 ~HaV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~~~~~--~~~Cgi~~~~~~p~~ 207 (208)
T 1o0e_A 156 NHGVTIVGYQA-----NYWIVRNSWGRYWGEKGYIRMLRVGG--CGLCGIARLPYYPTK 207 (208)
T ss_dssp CEEEEEEEECS-----SEEEEECSBCTTSTBTTEEEEECCST--TCGGGTTSSCEEEEC
T ss_pred CEEEEEEEeCC-----CeEEEEcCCCCcccCCcEEEEEcCCC--CCcCCCcccceeeec
Confidence 99999999996 79999999999999999999999973 256999999999985
No 28
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=3.7e-66 Score=460.55 Aligned_cols=215 Identities=39% Similarity=0.793 Sum_probs=197.0
Q ss_pred CCCCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCCCCchHHHHHHHH
Q 047793 104 IDVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFII 183 (324)
Q Consensus 104 ~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~gG~~~~a~~~~~ 183 (324)
.+||++||||++|+|+||||||.||||||||++++||++++++++..++||||+|++|... +.||+||++..|++|+.
T Consensus 16 ~~lP~~~DwR~~~~vtpVkdQg~CGsCWAFaa~~alE~~~~i~~~~~~~lSeq~l~dC~~~--~~gC~GG~~~~a~~yi~ 93 (241)
T 2oul_A 16 NFDHAAYDWRLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSFK--NYGCNGGLINNAFEDMI 93 (241)
T ss_dssp CCCSSCEEGGGTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCTT--SCTTBCBCHHHHHHHHH
T ss_pred ccCCCccccCcCCCCCCCccCccchHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhhcCC--CCCCCCCCHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999864 68999999999999998
Q ss_pred HhCCcCCCCcccccCCCCc-ccCCCCCCceEEEeeeEEcCCCcHHHHHHHHHcCCeEEEEeccCCccccccCCeeeCCCC
Q 047793 184 HNDGITTEANYPYQAVDGT-CNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQFYSSGVFTGDCG 262 (324)
Q Consensus 184 ~~~Gi~~e~~yPY~~~~~~-c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~~~ 262 (324)
++.|+++|++|||....+. |... .....++|++|..++..++++||++| |||+|+|+++ ++|+.|++|||..+|+
T Consensus 94 ~~~Gi~~e~~yPY~~~~~~~C~~~-~~~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~-~~f~~Y~~Giy~~~c~ 169 (241)
T 2oul_A 94 ELGGICPDGDYPYVSDAPNLCNID-RCTEKYGIKNYLSVPDNKLKEALRFL--GPISISVAVS-DDFAFYKEGIFDGECG 169 (241)
T ss_dssp HTTSBCBTTSSCCCTTSCCCCCTT-SSSCCBCCSEEEECCTTCHHHHHHHT--CCEEEEECBC-HHHHTCCSSBCCSCBC
T ss_pred HhCCcCccccCCCcCCCCCcCCCC-CCccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-cchhhcCCcEEcCcCC
Confidence 7679999999999998888 9875 34466789999999877899999999 9999999997 7899999999988877
Q ss_pred CCCCeEEEEeeecccC---------CCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 263 TELDHGVTAVGYGATA---------NGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 263 ~~~~Hav~iVGyg~~~---------~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
..++|||+|||||++. .|++|||||||||++||++|||||+|+.++..|.|||++.++||++
T Consensus 170 ~~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 240 (241)
T 2oul_A 170 DQLNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDESGLMRKCGLGTDAFIPLI 240 (241)
T ss_dssp SSCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCGGGTTSSEEEEEC
T ss_pred CCCCEEEEEEEeccccccccccccCCCCCEEEEEeCCCCCcccCCEEEEEcCCCCCCCcCCccceEEEEee
Confidence 6699999999999873 2789999999999999999999999998765567999999999985
No 29
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=4.2e-66 Score=460.79 Aligned_cols=216 Identities=37% Similarity=0.757 Sum_probs=197.0
Q ss_pred CCCCCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCCCCchHHHHHHH
Q 047793 103 VIDVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFI 182 (324)
Q Consensus 103 ~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~gG~~~~a~~~~ 182 (324)
..+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|++|... +.||+||++..|++|+
T Consensus 17 ~~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~alE~~~~i~~~~~~~lSeq~lvdC~~~--~~gC~GG~~~~a~~y~ 94 (243)
T 3bwk_A 17 AKLDRIAYDWRLHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFLFSEQELVDCSVK--NNGCYGGYITNAFDDM 94 (243)
T ss_dssp CCCCCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCSCCCBCHHHHHHHCTT--SCGGGCCCHHHHHHHH
T ss_pred cccCCCceecCcCCCCCCCccCCCCchHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcCC--CCCCCCCCHHHHHHHH
Confidence 35799999999999999999999999999999999999999999999999999999999864 6899999999999999
Q ss_pred HHhCCcCCCCcccccCCCCc-ccCCCCCCceEEEeeeEEcCCCcHHHHHHHHHcCCeEEEEeccCCccccccCCeeeCCC
Q 047793 183 IHNDGITTEANYPYQAVDGT-CNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQFYSSGVFTGDC 261 (324)
Q Consensus 183 ~~~~Gi~~e~~yPY~~~~~~-c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~~ 261 (324)
.++.|+++|++|||....+. |... .....++|++|..++..++++||++| |||+|+|+++ ++|+.|++|||...|
T Consensus 95 ~~~~Gi~~e~~yPY~~~~~~~C~~~-~~~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~-~~f~~Y~~Giy~~~c 170 (243)
T 3bwk_A 95 IDLGGLCSQDDYPYVSNLPETCNLK-RCNERYTIKSYVSIPDDKFKEALRYL--GPISISIAAS-DDFAFYRGGFYDGEC 170 (243)
T ss_dssp HHTTSBCBTTTSCCCTTSCCCCCGG-GCSSCBCCCEEEECCTTCHHHHHHHT--CCEEEEECCC-HHHHTCCSSSCCCCC
T ss_pred HHhCCcccccccCCcCCCCCcCCCC-CCccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-hhHHhcCCceecCCC
Confidence 87679999999999988888 9865 33456789999999877899999999 9999999997 789999999998888
Q ss_pred CCCCCeEEEEeeecccC---------CCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 262 GTELDHGVTAVGYGATA---------NGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 262 ~~~~~Hav~iVGyg~~~---------~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
+..++|||+|||||++. .|++|||||||||++||++|||||+|+.++..|.|||++.++||++
T Consensus 171 ~~~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 242 (243)
T 3bwk_A 171 GAAPNHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDENGYKKTCSIGTEAYVPLL 242 (243)
T ss_dssp CSSCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCSTTTTSSEEEEEC
T ss_pred CCcCCeEEEEEEecCccccccccccCCCCCEEEEEeCCCCCcCCCcEEEEEcCCCCCCCcCCccceEEEEec
Confidence 76699999999999873 2789999999999999999999999998765567999999999985
No 30
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=1.2e-65 Score=458.32 Aligned_cols=214 Identities=43% Similarity=0.878 Sum_probs=194.6
Q ss_pred CCCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCCCCchHHHHHHHHH
Q 047793 105 DVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIH 184 (324)
Q Consensus 105 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~gG~~~~a~~~~~~ 184 (324)
+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|++|+. .+.||+||++..|++|+.+
T Consensus 1 ~lP~~~DwR~~g~vtpVkdQg~CGsCWAfa~~~~lE~~~~i~~g~~~~LS~q~lvdC~~--~~~gC~GG~~~~a~~y~~~ 78 (246)
T 2b1m_A 1 DAPESWDWSKKGVITKVKFQGQCGSGWAFSATGAIEAAHAIATGNLVSLSEQELIDCVD--ESEGCYNGWHYQSFEWVVK 78 (246)
T ss_dssp -CCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSBTTTBCCHHHHHHHHHH
T ss_pred CCCCcCCCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhcC--CCCCCCCCCHHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999986 4789999999999999987
Q ss_pred hCCcCCCCcccccCCCCcccCCCCCCceEEEeee---EEcCCCcHHHHHHHHHc----CCeEEEEeccCCccccccCCee
Q 047793 185 NDGITTEANYPYQAVDGTCNKTNEASHVAKIKGY---ETVPANSEEALLKAVAN----QPVAVSIDASGSAFQFYSSGVF 257 (324)
Q Consensus 185 ~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~---~~~~~~~~~~i~~~l~~----gPV~v~~~~~~~~f~~y~~Giy 257 (324)
+.|+++|++|||...++.|... .....+++++| ..++..++++|+++|++ |||+|+|++ ++|++|++|||
T Consensus 79 ~~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~y~~~~~v~~~~~~~ik~~l~~~~~~GPV~v~i~~--~~f~~Y~~Giy 155 (246)
T 2b1m_A 79 HGGIASEADYPYKARDGKCKAN-EIQDKVTIDNYGVQILSNESTESEAESSLQSFVLEQPISVSIDA--KDFHFYSGGIY 155 (246)
T ss_dssp TTCBCBTTTSCCCSSCCCCCGG-GCCCCBCCSEEEEEECCTTSCHHHHHHHHHHHHHHSCEEEEECC--TTGGGCCSSEE
T ss_pred hCCcCccccccccCCCCcCcCC-CCCCceeEcCcceeeecCCChHHHHHHHHHhhccCCCEEEEEEc--chhhcccceee
Confidence 6799999999999998999865 33456788888 88877789999999987 999999999 58999999999
Q ss_pred eCC-CCCC--CCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 258 TGD-CGTE--LDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 258 ~~~-~~~~--~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
..+ |+.. ++|||+|||||++ +|++|||||||||++||++|||||+|+.++..|.|||++.++||++
T Consensus 156 ~~~~c~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~n~CgI~~~~~~p~~ 224 (246)
T 2b1m_A 156 DGGNCSSPYGINHFVLIVGYGSE-DGVDYWIAKNSWGEDWGIDGYIRIQRNTGNLLGVCGMNYFASYPII 224 (246)
T ss_dssp CCTTCCSSCCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECCSSCTTCGGGTTSEEEEEEC
T ss_pred cCCCCCCCCcCceEEEEEEEecc-CCceEEEEEeCCCCcccCCcEEEEEcCCCCCCccccccceeeEEEe
Confidence 984 8764 8999999999998 7999999999999999999999999998544567999999999985
No 31
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=7.8e-66 Score=453.06 Aligned_cols=211 Identities=44% Similarity=0.913 Sum_probs=194.8
Q ss_pred CCceeecccCC-CCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCCCCchHHHHHHHHH
Q 047793 106 VPATMDWRKNG-AVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIH 184 (324)
Q Consensus 106 lP~~~Dwr~~g-~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~gG~~~~a~~~~~~ 184 (324)
||++||||++| +||||||||.||||||||++++||++++++++..++||+|+|++|+....+.||+||++..|++|+.+
T Consensus 1 lP~~~DwR~~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~ 80 (220)
T 8pch_A 1 YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRY 80 (220)
T ss_dssp CCSCEEHHHHSSCSCCCCBCTTSCCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCEecCcCCCcCCcccccCCCchHHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhCcCccCCCCCCCCCHHHHHHHHHH
Confidence 79999999999 89999999999999999999999999999999999999999999987555789999999999999987
Q ss_pred hCCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHH-cCCeEEEEeccCCccccccCCeeeCC-CC
Q 047793 185 NDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVA-NQPVAVSIDASGSAFQFYSSGVFTGD-CG 262 (324)
Q Consensus 185 ~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Giy~~~-~~ 262 (324)
+.|+++|++|||....+.|... ......++++|..++..++++||++|+ +|||+++|++. .+|+.|++|||..+ |.
T Consensus 81 ~~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~~~~~~~-~~f~~Y~~Giy~~~~~~ 158 (220)
T 8pch_A 81 NKGIMGEDTYPYKGQDDHCKFQ-PDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVT-NDFLMYRKGIYSSTSCH 158 (220)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCC-GGGEEECEEEEEECCTTCHHHHHHHHHHTCCEEEEECCC-HHHHTCCSSEECCSSCC
T ss_pred cCCcCcccccCccCCCCCCCCC-CCcceEEeCCEEEeCCCCHHHHHHHHHhcCCEEEEEEec-cchhhcCCCcccCCcCC
Confidence 7799999999999999999876 345667899999998788999999998 79999999999 58999999999886 65
Q ss_pred C---CCCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceee
Q 047793 263 T---ELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPT 323 (324)
Q Consensus 263 ~---~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~ 323 (324)
. .++|||+|||||++ +|++|||||||||++||++|||||+|+. |.|||+++++||+
T Consensus 159 ~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~----n~cgi~~~~~~~~ 217 (220)
T 8pch_A 159 KTPDKVNHAVLAVGYGEE-NGIPYWIVKNSWGPQWGMNGYFLIERGK----NMCGLAACASYPI 217 (220)
T ss_dssp CSTTTCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTSCEEEE
T ss_pred CCCCcCCcEEEEEEEEcc-CCeeEEEEECCCCcCcccCCEEEEEcCC----CccccCCCceeEe
Confidence 3 68999999999987 6899999999999999999999999986 4699999999997
No 32
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=3.5e-66 Score=456.55 Aligned_cols=219 Identities=47% Similarity=0.970 Sum_probs=199.3
Q ss_pred CCCCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCCCCchHHHHHHHH
Q 047793 104 IDVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFII 183 (324)
Q Consensus 104 ~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~gG~~~~a~~~~~ 183 (324)
.+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|++|....++.+|+||.+..|++|+.
T Consensus 5 ~~lP~~~Dwr~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gC~GG~~~~a~~~~~ 84 (224)
T 3f75_A 5 SELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVL 84 (224)
T ss_dssp GGSCSCEEHHHHTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHHHHHH
T ss_pred cCCCCceecccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCCceeCHHHHhhcccCCCCCCCCCCCHHHHHHHHH
Confidence 36999999999999999999999999999999999999999999999999999999998755578999999999999999
Q ss_pred HhCCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHHcCCeEEEEeccCCccccccCCeeeCCCCC
Q 047793 184 HNDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQFYSSGVFTGDCGT 263 (324)
Q Consensus 184 ~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~ 263 (324)
+++|+++|++|||...++.|... ......++.+|..++..++++|+++|.+|||+++|++..++|++|++|||.+.|..
T Consensus 85 ~~~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~~~~~~~~~l~~~l~~gPV~v~i~~~~~~f~~y~~Giy~~~~~~ 163 (224)
T 3f75_A 85 DSGGICSEDAYPYLARDEECRAQ-SCEKVVKILGFKDVPRRSEAAMKAALAKSPVSIAIEADQMPFQFYHEGVFDASCGT 163 (224)
T ss_dssp HHTCBCBTTTSCCCSSCCCCCGG-GSCCCBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTEEEEEECCCCCC
T ss_pred HhCCccccccCCCcCCCCCCCcC-CCCceEEeccEEEeCCChHHHHHHHHcCCCEEEEEeccchhhhcCccceECCCCCC
Confidence 76799999999999999999865 33445678999999878899999999999999999998568999999999966888
Q ss_pred CCCeEEEEeeecccC-CCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 264 ELDHGVTAVGYGATA-NGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 264 ~~~Hav~iVGyg~~~-~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
.++|||+|||||++. ++++|||||||||++||++|||||+|+.. ..|.|||+++++||++
T Consensus 164 ~~~Hav~iVGyg~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~-~~~~cgi~~~~~~p~~ 224 (224)
T 3f75_A 164 DLDHGVLLVGYGTDKESKKDFWIMKNSWGTGWGRDGYMYMAMHKG-EEGQCGLLLDASFPVM 224 (224)
T ss_dssp CCCEEEEEEEEEEETTTTEEEEEEECSBCTTSTBTTEEEEESCSC-TTCGGGTTSSCEEEEC
T ss_pred ccCeEEEEEEEecccCCCCCEEEEECCcCcchhhCCEEEEEcCCC-CCCcCcccCceeeeeC
Confidence 899999999999874 68899999999999999999999999973 1257999999999986
No 33
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=1e-64 Score=444.19 Aligned_cols=208 Identities=44% Similarity=0.836 Sum_probs=186.3
Q ss_pred CCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHh
Q 047793 106 VPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHN 185 (324)
Q Consensus 106 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~gG~~~~a~~~~~~~ 185 (324)
||++||||++|+||||||||.||||||||++++||++++++++..++||||+|++|+.. +.||+||++..|++|+.++
T Consensus 1 lP~~~Dwr~~g~vtpVkdQg~cGsCWAfa~~~ale~~~~i~~~~~~~lS~q~l~dC~~~--~~gC~GG~~~~a~~y~~~~ 78 (215)
T 3i06_A 1 APAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKT--DSGCSGGLMNNAFEWIVQE 78 (215)
T ss_dssp CCSEEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHCSS--SCGGGCCCHHHHHHHHHHH
T ss_pred CCCcccCCcCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHhccCCC--CCCCCCCCHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999864 7899999999999999875
Q ss_pred --CCcCCCCcccccCCCC---cccCCCCCCceEEEeeeEEcCCCcHHHHHHHHH-cCCeEEEEeccCCccccccCCeeeC
Q 047793 186 --DGITTEANYPYQAVDG---TCNKTNEASHVAKIKGYETVPANSEEALLKAVA-NQPVAVSIDASGSAFQFYSSGVFTG 259 (324)
Q Consensus 186 --~Gi~~e~~yPY~~~~~---~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Giy~~ 259 (324)
.|+++|++|||....+ .|... ......++++|..++ .++++|+++|+ +|||+++|++. +|++|++|||..
T Consensus 79 ~~gGi~~e~~yPY~~~~~~~~~C~~~-~~~~~~~i~~~~~v~-~~~~~ik~~l~~~gPV~v~~~~~--~f~~Y~~Giy~~ 154 (215)
T 3i06_A 79 NNGAVYTEDSYPYASGEGISPPCTTS-GHTVGATITGHVELP-QDEAQIAAWLAVNGPVAVAVDAS--SWMTYTGGVMTS 154 (215)
T ss_dssp STTEEEC-CCSCCCCTTSCCCCCCCS-SCCEEEEEEEEEECC-SCHHHHHHHHHHHCCEEEEECCT--TGGGCCSSEECS
T ss_pred ccccccccCccCCcCCCCCCCccccC-CcccceEecceEEeC-ChHHHHHHHHHHCCCEEEEEEch--HHhcCCCCcccC
Confidence 4799999999987543 68765 334567899999997 58899999998 79999999984 799999999986
Q ss_pred CCCCCCCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 260 DCGTELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 260 ~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
.....++|||+|||||++ ++++|||||||||++||++|||||+|+. |.|||++.++||++
T Consensus 155 ~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~rg~----n~cgi~~~~~~~~~ 214 (215)
T 3i06_A 155 CVSEQLDHGVLLVGYNDS-AAVPYWIIKNSWTTQWGEEGYIRIAKGS----NQCLVKEEASSAVV 214 (215)
T ss_dssp CCCSCCCEEEEEEEEESS-SSSCEEEEECSBCTTSTBTTEEEEESSS----CGGGTTSSEEEEEE
T ss_pred CCCCccCcEEEEEEEecc-CCcEEEEEECCCCCCcccCceEEEecCC----CeecCCCceeEEec
Confidence 445678999999999987 7899999999999999999999999997 35999999999985
No 34
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=5.9e-65 Score=445.31 Aligned_cols=208 Identities=40% Similarity=0.760 Sum_probs=189.1
Q ss_pred CCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHh
Q 047793 106 VPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHN 185 (324)
Q Consensus 106 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~gG~~~~a~~~~~~~ 185 (324)
||++||||++|+|+||||||.||||||||++++||++++++++..++||||+|+||... +.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vt~VkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~--~~gC~GG~~~~a~~~i~~~ 78 (214)
T 1m6d_A 1 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKM--DKACMGGLPSNAYSAIKNL 78 (214)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCSS--SCTTBCCCHHHHHHHHHHH
T ss_pred CCCcCcCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcCC--CCCCCCCCHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999863 6899999999999999877
Q ss_pred CCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHH-cCCeEEEEeccCCccccccCCeeeCC---C
Q 047793 186 DGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVA-NQPVAVSIDASGSAFQFYSSGVFTGD---C 261 (324)
Q Consensus 186 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Giy~~~---~ 261 (324)
.|+++|++|||.+....|... ......++.++..++ .++++||++|+ +|||+|+|++. .|++|++|||..+ |
T Consensus 79 ~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~i~-~~~~~ik~~l~~~GPV~v~i~~~--~f~~Y~~Giy~~~~~~c 154 (214)
T 1m6d_A 79 GGLETEDDYSYQGHMQSCQFS-AEKAKVYIQDSVELS-QNEQKLAAWLAKRGPISVAINAF--GMQFYRHGISRPLRPLC 154 (214)
T ss_dssp TCBCBTTTSCCCSSCCCCCCC-GGGCCBCCSEEEECC-SCHHHHHHHHHHHCCEEEEECTH--HHHHCCSSEECCCGGGS
T ss_pred cCcccccCcCcCCCCCcCCCC-cccceEEecCEEEeC-hHHHHHHHHHHhCCCEEEEEEec--hhhhcCCceecCCCCcC
Confidence 799999999999988999875 333456788888887 48889999998 79999999997 4999999999863 6
Q ss_pred CC-CCCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 262 GT-ELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 262 ~~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
+. .++|||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||++.++||++
T Consensus 155 ~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~----n~Cgi~~~~~~~~~ 213 (214)
T 1m6d_A 155 SPWLIDHAVLLVGYGQR-SDVPFWAIKNSWGTDWGEKGYYYLHRGS----GACGVNTMASSAVV 213 (214)
T ss_dssp CTTCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEESSS----CGGGTTTTCEEEEC
T ss_pred CCCcCCEEEEEEEEeec-CCcEEEEEEeCCCCCcccCcEEEEEcCC----CccccCceeEEEEe
Confidence 64 68999999999997 7899999999999999999999999986 46999999999985
No 35
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=1e-64 Score=446.41 Aligned_cols=210 Identities=34% Similarity=0.609 Sum_probs=192.0
Q ss_pred CCCCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCCCCchHHHHHHHH
Q 047793 104 IDVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFII 183 (324)
Q Consensus 104 ~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~gG~~~~a~~~~~ 183 (324)
.+||++||||++|+||||||||.||||||||++++||+++.++++..++||||+|++|.. +.||+||++..|++|+.
T Consensus 8 ~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~~~~~~~~~lS~q~l~dc~~---~~gC~GG~~~~a~~~~~ 84 (222)
T 3f5v_A 8 GNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRQQSLDLAEQELVDCAS---QHGCHGDTIPRGIEYIQ 84 (222)
T ss_dssp CCCCSCEEHHHHTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC---SSTTBCCCHHHHHHHHH
T ss_pred cCCCCCCCCccCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhCcC---CCCCCCCCHHHHHHHHH
Confidence 479999999999999999999999999999999999999999999999999999999987 68999999999999999
Q ss_pred HhCCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHHc--CCeEEEEecc-CCccccccCCeeeCC
Q 047793 184 HNDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVAN--QPVAVSIDAS-GSAFQFYSSGVFTGD 260 (324)
Q Consensus 184 ~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~--gPV~v~~~~~-~~~f~~y~~Giy~~~ 260 (324)
++ |+++|++|||.+..+.|.. .....+++++|..++..++++||++|++ |||+|+|.+. .++|++|++|||...
T Consensus 85 ~~-Gi~~e~~yPY~~~~~~C~~--~~~~~~~i~~~~~v~~~~~~~ik~~l~~~~gpV~v~~~~~~~~~f~~Y~~gi~~~~ 161 (222)
T 3f5v_A 85 HN-GVVQESYYRYVAREQSCRR--PNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQR 161 (222)
T ss_dssp HH-CEEBGGGSCCCSSCCCCCC--CSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBCC
T ss_pred Hc-CCCchhhCCCcccCCCccC--CcCcceeeccEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccchhhhccCCCceecC
Confidence 76 9999999999998899983 3556788999999977889999999985 8999999984 268999999987544
Q ss_pred -C-CCCCCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793 261 -C-GTELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA 324 (324)
Q Consensus 261 -~-~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 324 (324)
+ ...++|||+|||||++ +|++|||||||||++||++|||||+|+. |.|||+++++||+|
T Consensus 162 ~~~~~~~~HaV~iVGyg~~-~g~~ywivkNSWG~~WGe~Gy~~i~r~~----n~cgi~~~~~~p~~ 222 (222)
T 3f5v_A 162 DNGYQPNYHAVNIVGYSNA-QGVDYWIVRNSWDTNWGDNGYGYFAANI----DLMMIEEYPYVVIL 222 (222)
T ss_dssp CCSSSCEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTSCEEEEC
T ss_pred CCCCCccCcEEEEEEEecc-CCCEEEEEEcCCCCCcccCCEEEEEcCC----CeecCCCceeEEeC
Confidence 3 4678999999999987 7899999999999999999999999996 46999999999986
No 36
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=2.2e-60 Score=431.07 Aligned_cols=213 Identities=28% Similarity=0.607 Sum_probs=184.9
Q ss_pred CCCCCCceeecccC---CCCCcccCCC---CCcchHHHHHHHHHhHHHHhhcC-C--CccCCHHHHhhhcCCCCCCCCCC
Q 047793 102 NVIDVPATMDWRKN---GAVTPIKNQG---PCGSCWAFSAVAATEGITQLTTG-K--LISLSEQELVSCDTSGVDHGCEG 172 (324)
Q Consensus 102 ~~~~lP~~~Dwr~~---g~v~pV~dQg---~cGsCwAfA~~~~le~~~~~~~~-~--~~~lS~q~l~~c~~~~~~~gc~g 172 (324)
...+||++||||++ ++|+|||||| .||||||||++++||++++|+++ . .++||+|+|+||.. ..||+|
T Consensus 32 ~~~~lP~~~DwR~~~~~~~vtpVkdQg~~~~CGSCWAfa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~---~~gC~G 108 (277)
T 1deu_A 32 SPADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGN---AGSCEG 108 (277)
T ss_dssp CGGGSCSCEETTSBTTBCCCCCCCBTTCSSCCBCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSS---SEETBE
T ss_pred ccccCCCceecccCCCCCcCCccccCCCCCCCcchHHHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcC---CCCCCC
Confidence 34579999999998 6799999999 99999999999999999999875 3 47999999999986 379999
Q ss_pred CchHHHHHHHHHhCCcCCCCcccccCCCCcccC-CC-------------CCCceEEEeeeEEcCCCcHHHHHHHHH-cCC
Q 047793 173 GEMEDAFKFIIHNDGITTEANYPYQAVDGTCNK-TN-------------EASHVAKIKGYETVPANSEEALLKAVA-NQP 237 (324)
Q Consensus 173 G~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~-~~-------------~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gP 237 (324)
|++..|++|+.++ |+++|++|||...+..|.. .. .....+++..|..++ ++++||++|+ +||
T Consensus 109 G~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~c~~~~~~~~~~i~~y~~v~--~~~~i~~~i~~~GP 185 (277)
T 1deu_A 109 GNDLSVWDYAHQH-GIPDETCNNYQAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLS--GREKMMAEIYANGP 185 (277)
T ss_dssp ECHHHHHHHHHHT-CBCBGGGSCCCSSCCCCCHHHHSEEEEETTEEEECSSCCCBCEEEEEEEC--SHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHc-CCCcCccCCCcCCCCCccccccccccccCcccccccCcceEEeceeEecC--CHHHHHHHHHHcCC
Confidence 9999999999865 9999999999998888873 10 112346778888886 5888999998 799
Q ss_pred eEEEEeccCCccccccCCeeeCC-CCCCCCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCC-----CCCC
Q 047793 238 VAVSIDASGSAFQFYSSGVFTGD-CGTELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDID-----AKEG 311 (324)
Q Consensus 238 V~v~~~~~~~~f~~y~~Giy~~~-~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~-----~~~~ 311 (324)
|+|+|+++ .+|+.|++|||..+ +...++|||+|||||++ +|++|||||||||++|||+|||||+|+.+ +. .
T Consensus 186 V~v~i~~~-~~f~~Y~~GIy~~~~~~~~~~HaV~iVGyg~~-~g~~YWivkNSWG~~WGe~GY~~i~rg~n~~g~g~~-~ 262 (277)
T 1deu_A 186 ISCGIMAT-ERLANYTGGIYAEYQDTTYINHVVSVAGWGIS-DGTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKGAR-Y 262 (277)
T ss_dssp EEEEECCC-HHHHTCCSSEECBCCSCCCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECTTHHHHTGGG-T
T ss_pred EEEEEecc-cccccCcCcEECCCCCCCcCCeEEEEEEeccc-CCccEEEEEeCCCCccCCCcEEEEEcCCCccccccc-c
Confidence 99999998 68999999999987 55678999999999998 79999999999999999999999999975 11 1
Q ss_pred Ccccccccceee
Q 047793 312 LCGIAMDSSYPT 323 (324)
Q Consensus 312 ~Cgi~~~~~~p~ 323 (324)
.|||++.++|++
T Consensus 263 ~cgIe~~~~~~~ 274 (277)
T 1deu_A 263 NLAIEEHCTFGD 274 (277)
T ss_dssp BTTTTSCEEEEE
T ss_pred cceeccccEeec
Confidence 599999999875
No 37
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=3.3e-60 Score=428.31 Aligned_cols=211 Identities=32% Similarity=0.634 Sum_probs=177.0
Q ss_pred CCCCceeecccC----CCCCcccCCCCCcchHHHHHHHHHhHHHHhhcC--CCccCCHHHHhhhcCCCCCCCCCCCchHH
Q 047793 104 IDVPATMDWRKN----GAVTPIKNQGPCGSCWAFSAVAATEGITQLTTG--KLISLSEQELVSCDTSGVDHGCEGGEMED 177 (324)
Q Consensus 104 ~~lP~~~Dwr~~----g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~--~~~~lS~q~l~~c~~~~~~~gc~gG~~~~ 177 (324)
.+||++||||++ +.|+||||||.||||||||++++||++++|+++ ..++||||+|++|+..+.+.||+||++..
T Consensus 5 ~~lP~~~D~R~~w~~~~~vt~VkdQg~CGSCWAfa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~~~~~gC~GG~~~~ 84 (266)
T 3cbj_A 5 LKLPASFDAREQWPQCPTIKEIRDQGSCGSAWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAE 84 (266)
T ss_dssp CCCCSCEEHHHHSTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGGGGBCTTBCBCHHH
T ss_pred CCCCccCcchhccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccccCCCCCCCCCHHH
Confidence 379999999987 789999999999999999999999999999875 37899999999998632368999999999
Q ss_pred HHHHHHHhCCcCC-------CCccccc---------CCCCcccCC---------CCC-------C-ceEEEeeeEEcCCC
Q 047793 178 AFKFIIHNDGITT-------EANYPYQ---------AVDGTCNKT---------NEA-------S-HVAKIKGYETVPAN 224 (324)
Q Consensus 178 a~~~~~~~~Gi~~-------e~~yPY~---------~~~~~c~~~---------~~~-------~-~~~~i~~~~~~~~~ 224 (324)
|++|+.++ |+++ |.+|||. +..+.|... ... . ..+.+ .+..++ .
T Consensus 85 a~~y~~~~-Gi~~~~~Y~~~e~~~PY~~~~~~~~~~~~~~~C~~~~~~p~c~~~c~~~~~~~~~~~~~~~~-~~~~v~-~ 161 (266)
T 3cbj_A 85 AWNFWTRK-GLVSGGLYESHVGCRPYSIPPCEAHVNGARPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGY-NSYSVS-N 161 (266)
T ss_dssp HHHHHHHT-CBCBCCSTTCCCSSSCCCSCCCSCCCSCSSCCCCSCCCCCCCCCSCCTTCCSCTGGGCBCBS-CCEECC-S
T ss_pred HHHHHHHh-CcCcCccccccccccCcccccccccccCCCCCCccccCCCccccccCCCCcceeeeeeeeee-eeEEeC-C
Confidence 99999865 9999 9999998 334556321 000 0 01122 233465 5
Q ss_pred cHHHHHHHHH-cCCeEEEEeccCCccccccCCeeeCCCCC-CCCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEE
Q 047793 225 SEEALLKAVA-NQPVAVSIDASGSAFQFYSSGVFTGDCGT-ELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRM 302 (324)
Q Consensus 225 ~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Giy~~~~~~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i 302 (324)
++++|+++|+ +|||+|+|+++ ++|+.|++|||.++|.. .++|||+|||||++ +|++|||||||||++|||+|||||
T Consensus 162 ~~~~i~~~i~~~GPV~v~i~~~-~~f~~Y~~Gvy~~~~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i 239 (266)
T 3cbj_A 162 SEKDIMAEIYKNGPVEGAFSVY-SDFLLYKSGVYQHVTGEMMGGHAIRILGWGVE-NGTPYWLVANSWNTDWGDNGFFKI 239 (266)
T ss_dssp CHHHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEE
T ss_pred CHHHHHHHHHhcCCEEEEEEec-cchhhcCCeEEecCCCCccCCeEEEEEEeccc-CCceEEEEEcCCCCccCCCCEEEE
Confidence 8899999998 79999999998 68999999999987654 46999999999987 789999999999999999999999
Q ss_pred EecCCCCCCCcccccccceee
Q 047793 303 KRDIDAKEGLCGIAMDSSYPT 323 (324)
Q Consensus 303 ~~~~~~~~~~Cgi~~~~~~p~ 323 (324)
+|+. |.|||++.+++++
T Consensus 240 ~rg~----n~cgI~~~~~~~~ 256 (266)
T 3cbj_A 240 LRGQ----DHCGIESEVVAGI 256 (266)
T ss_dssp ECSS----CGGGTTTSCEECC
T ss_pred EcCC----CcccccCceEEEE
Confidence 9986 3599999998875
No 38
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=1.8e-59 Score=420.81 Aligned_cols=210 Identities=32% Similarity=0.648 Sum_probs=174.9
Q ss_pred CCCceeecccC----CCCCcccCCCCCcchHHHHHHHHHhHHHHhhcC--CCccCCHHHHhhhcCCCCCCCCCCCchHHH
Q 047793 105 DVPATMDWRKN----GAVTPIKNQGPCGSCWAFSAVAATEGITQLTTG--KLISLSEQELVSCDTSGVDHGCEGGEMEDA 178 (324)
Q Consensus 105 ~lP~~~Dwr~~----g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~--~~~~lS~q~l~~c~~~~~~~gc~gG~~~~a 178 (324)
+||++||||++ +.||||||||.||||||||++++||++++|+++ ..++||||+|+||+.. .+.||+||++..|
T Consensus 2 ~lP~s~D~R~~~~~~~~vtpVkdQg~CGSCWAFaa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~~-~~~GC~GG~~~~a 80 (254)
T 3qsd_A 2 EIPSSFDSRKKWPRCKSIATIRDQSRCGSCWAFGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCES-CGLGCEGGILGPA 80 (254)
T ss_dssp CCCSCEEHHHHCTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCTT-SBCTTBCBCHHHH
T ss_pred CCCCcCccccccCCCCccCCCCCcccCccHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHhhhcC-CCCCCCCCCHHHH
Confidence 69999999998 689999999999999999999999999999976 6789999999999864 3589999999999
Q ss_pred HHHHHHhCCcCCCCcc-------ccc---------CCCCcccCC----------CCC---Cc----eEEEeeeEEcCCCc
Q 047793 179 FKFIIHNDGITTEANY-------PYQ---------AVDGTCNKT----------NEA---SH----VAKIKGYETVPANS 225 (324)
Q Consensus 179 ~~~~~~~~Gi~~e~~y-------PY~---------~~~~~c~~~----------~~~---~~----~~~i~~~~~~~~~~ 225 (324)
++|++++ ||++|++| ||. +..+.|... ... .. .........++ .+
T Consensus 81 ~~yi~~~-Gi~~e~~y~~~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~-~~ 158 (254)
T 3qsd_A 81 WDYWVKE-GIVTGSSKENHAGCEPYPFPKCEHHTKGKYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSYNVK-ND 158 (254)
T ss_dssp HHHHHHT-CBCBCCCTTTCCSSSCCSSCCCBCSSCSSSCBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCCSEEEECC-SC
T ss_pred HHHHHHc-CCCcccccccCcCcCCcccccccccccCcCCCCcccccCCccccccccCCccceeeeeeeeeeeeEecC-Cc
Confidence 9999876 99999888 996 334455321 000 00 00011122444 58
Q ss_pred HHHHHHHHH-cCCeEEEEeccCCccccccCCeeeCCCCC-CCCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEE
Q 047793 226 EEALLKAVA-NQPVAVSIDASGSAFQFYSSGVFTGDCGT-ELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMK 303 (324)
Q Consensus 226 ~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Giy~~~~~~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~ 303 (324)
+++|+++|+ +|||+|+|++. ++|++|++|||..++.. .++|||+|||||++ +|++|||||||||++||++|||||+
T Consensus 159 ~~~i~~~l~~~gPv~~~~~~~-~~f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~-~g~~ywivkNSWG~~WG~~Gy~~i~ 236 (254)
T 3qsd_A 159 EKAIQKEIMKYGPVEAGFTVY-EDFLNYKSGIYKHITGETLGGHAIRIIGWGVE-NKAPYWLIANSWNEDWGENGYFRIV 236 (254)
T ss_dssp HHHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEE
T ss_pred HHHHHHHHHHcCCEEEEEEec-cccccccCCeeccCCCCCCCCeEEEEEEEeec-CCeeEEEEEeCCCCCcccCCeEEEE
Confidence 899999998 79999999998 78999999999988554 56999999999987 7899999999999999999999999
Q ss_pred ecCCCCCCCcccccccceee
Q 047793 304 RDIDAKEGLCGIAMDSSYPT 323 (324)
Q Consensus 304 ~~~~~~~~~Cgi~~~~~~p~ 323 (324)
|+. |.|||++.++..+
T Consensus 237 rg~----n~CgI~~~~~~~~ 252 (254)
T 3qsd_A 237 RGR----DECSIESEVTAGR 252 (254)
T ss_dssp CSS----CGGGTTSSEEEEE
T ss_pred cCC----CeecCCCceEeec
Confidence 997 3599999987654
No 39
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=7.5e-55 Score=393.49 Aligned_cols=211 Identities=25% Similarity=0.507 Sum_probs=165.1
Q ss_pred ceeecccC-CCCC--cccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCCCCchH-HHHHHHH
Q 047793 108 ATMDWRKN-GAVT--PIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEME-DAFKFII 183 (324)
Q Consensus 108 ~~~Dwr~~-g~v~--pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~gG~~~-~a~~~~~ 183 (324)
.-.|||++ |+++ ||||||.||||||||++++||++++++++..+.||||+|+||+....+.||+||... .++.++.
T Consensus 9 ~~~dWR~~~~~~~it~VkdQg~CGSCWAFaa~~alE~~~~i~~~~~~~LS~Q~lvdC~~~~~~~GC~GG~~~~~~~~~i~ 88 (265)
T 2wbf_X 9 YCNRLKDENNCISNLQVEDQGNCDTSWIFASKYHLETIRCMKGYEPTKISALYVANCYKGEHKDRCDEGSSPMEFLQIIE 88 (265)
T ss_dssp CBCGGGCTTSTGGGSCCCBCTTSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHCCSSSCCCTTTCCCCHHHHHHHHH
T ss_pred HHHhhccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHhhcccCCCCCCCCCCHHHHHHHHH
Confidence 35799999 6877 999999999999999999999999999989999999999999875557899999655 4457776
Q ss_pred HhCCcCCCCcccccCC--CCcccCCCC----------------CCceEEEeeeEEcCCC----c----HHHHHHHHH-cC
Q 047793 184 HNDGITTEANYPYQAV--DGTCNKTNE----------------ASHVAKIKGYETVPAN----S----EEALLKAVA-NQ 236 (324)
Q Consensus 184 ~~~Gi~~e~~yPY~~~--~~~c~~~~~----------------~~~~~~i~~~~~~~~~----~----~~~i~~~l~-~g 236 (324)
+++||++|++|||... .+.|+.... .....++.+|..++.. + +++||++|+ +|
T Consensus 89 ~~Ggi~~e~~yPY~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ik~~i~~~G 168 (265)
T 2wbf_X 89 DYGFLPAESNYPYNYVKVGEQCPKVEDHWMNLWDNGKILHNKNEPNSLDGKGYTAYESERFHDNMDAFVKIIKTEVMNKG 168 (265)
T ss_dssp HHCCCCBTTTSCCCGGGTTSCCCCCCTTCCCTTTTCEECCCCCSSSTTCCSSEEEEEGGGGTTCHHHHHHHHHHHHHHHS
T ss_pred HcCCCCCccccCCcCCCCCCCCCCccccccccccccccccccCCCceeecCCceEeeccccccchhhHHHHHHHHHHhcC
Confidence 6745999999999863 467865321 1123456777766531 3 478999998 79
Q ss_pred CeEEEEeccCCcccccc-CCee-eCCCCC-CCCeEEEEeeeccc--CCC--ccEEEEEcCCCCCCCCCceEEEEecCCCC
Q 047793 237 PVAVSIDASGSAFQFYS-SGVF-TGDCGT-ELDHGVTAVGYGAT--ANG--TKYWLVKNSWGTSWGEEGYIRMKRDIDAK 309 (324)
Q Consensus 237 PV~v~~~~~~~~f~~y~-~Giy-~~~~~~-~~~Hav~iVGyg~~--~~g--~~ywivkNSWG~~WG~~Gy~~i~~~~~~~ 309 (324)
||+|+|++. +|+.|+ +|++ ...|+. .++|||+|||||++ ++| ++|||||||||++|||+|||||+|+.+
T Consensus 169 PV~v~i~~~--~f~~y~~~g~~~~~~c~~~~~~HaV~iVGyG~~~~~~g~~~~YWivkNSWG~~WGe~GY~ri~~~g~-- 244 (265)
T 2wbf_X 169 SVIAYIKAE--NVMGYEFSGKKVKNLCGDDTADHAVNIVGYGNYVNSEGEKKSYWIVRNSWGPYWGDEGYFKVDMYGP-- 244 (265)
T ss_dssp CEEEEECGG--GGCSGGGGSSSEECCCCCSCCCEEEEEEEEEEEECTTSCEEEEEEEECSBCTTSTBTTEEEEESSCC--
T ss_pred CEEEEEEcc--cccccccCCcEEcCCCCCCcCCEEEEEEEEeCCcccCCCcCCEEEEEcCCCCccCCCCEEEEEecCC--
Confidence 999999986 476664 4433 234764 68999999999985 345 689999999999999999999998643
Q ss_pred CCCccccc---ccceee
Q 047793 310 EGLCGIAM---DSSYPT 323 (324)
Q Consensus 310 ~~~Cgi~~---~~~~p~ 323 (324)
|.|||+. .++||+
T Consensus 245 -n~Cgi~~~~~~~~~~~ 260 (265)
T 2wbf_X 245 -THCHFNFIHSVVIFNV 260 (265)
T ss_dssp -TTCSSCSCCEEEEECE
T ss_pred -CccCcceeEEEEeccc
Confidence 4599555 555553
No 40
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=9.1e-53 Score=384.24 Aligned_cols=233 Identities=21% Similarity=0.252 Sum_probs=176.3
Q ss_pred CeEEEcccCCCCCHHHHHHhhcCccCCCCCCCCCCCcccccC--CCCCCceeecccCCCCCcccCCCCCcchHHHHHHHH
Q 047793 61 PYKLSINEFADQTNQEFKAFRNGYRRPDGLTSRKGTSFKYEN--VIDVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAA 138 (324)
Q Consensus 61 s~~~g~N~fsd~t~~E~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~ 138 (324)
...-..|.+.++..|.++.. ++..++... .+. ..+.... ..+||++||||+++ ||||||.||||||||++++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~-lG~~p~~~d-~rd-~~~~~~~~~~~~lP~s~DwR~~~---pVkdQG~CGSCWAFAa~~a 86 (291)
T 3ois_A 13 GLVPRGSHMQTVLKRRKKSG-YGYIPDIAD-IRD-FSYTPEKSVIAALPPKVDLTPPF---QVYDQGRIGSCTANALAAA 86 (291)
T ss_dssp ----------CCCCCCCCTT-CCEECCCCC-TTC-CBCCCCHHHHHTCCSEEECCCSS---CCCBCTTSSCHHHHHHHHH
T ss_pred CcccchhhHhHhhhcccccc-CCCCCCCCc-ccc-cccCCCccccccCCcceecccCC---CcccCCCCccHHHHHHHHH
Confidence 34556789999998888765 555544321 111 1111111 23799999999984 9999999999999999999
Q ss_pred HhHHHHhhcCCCccCCHHHHh--hhcCC-CCC-CCCCCCchHHHHHHHHHhCCcCCCCcccccCCC---CcccCCC----
Q 047793 139 TEGITQLTTGKLISLSEQELV--SCDTS-GVD-HGCEGGEMEDAFKFIIHNDGITTEANYPYQAVD---GTCNKTN---- 207 (324)
Q Consensus 139 le~~~~~~~~~~~~lS~q~l~--~c~~~-~~~-~gc~gG~~~~a~~~~~~~~Gi~~e~~yPY~~~~---~~c~~~~---- 207 (324)
||++++ +++..+.||+|+|+ +|... .++ .+|.||++..|++|+.++ ||++|++|||.+.+ +.|....
T Consensus 87 lE~~~~-~~g~~~~lS~q~l~~~~c~~~~~~~~~~c~GG~~~~A~~yi~~~-Gi~~e~~yPY~~~~~~~~~C~~~~~~~~ 164 (291)
T 3ois_A 87 IQFERI-HDKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKL-GVCPEKEWPYGDTPADPRTEEFPPGAPA 164 (291)
T ss_dssp HHHHHH-HTTCSSCCCBCHHHHHHHHHHHSSCTTSCCCEEHHHHHHHHHHT-CCCBGGGSCCCCCCCCTTTCSCCTTCGG
T ss_pred HHHHHH-HhCCCCCcCcCHHHHHhhhhhhhcCCCCCCCcCHHHHHHHHHHh-CCCCHhhCCCCCCccccccccccccccc
Confidence 999876 45677899999998 67642 123 468899999999999876 99999999998763 3554410
Q ss_pred ---------CCCceEEEeeeEEcCCCcHHHHHHHHH-cCCeEEEEeccCCccccccC--CeeeCC-CCC--CCCeEEEEe
Q 047793 208 ---------EASHVAKIKGYETVPANSEEALLKAVA-NQPVAVSIDASGSAFQFYSS--GVFTGD-CGT--ELDHGVTAV 272 (324)
Q Consensus 208 ---------~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~--Giy~~~-~~~--~~~Hav~iV 272 (324)
.....+++++|..++. ++++|+++|+ +|||+|+|.++ ++|+.|++ |||..+ |.. .++|||+||
T Consensus 165 ~~~p~~~C~~~~~~~~i~~y~~v~~-~e~~i~~al~~~gPV~v~~~~~-~~f~~y~~~~Gi~~~~~~~~~~~~~Hav~iV 242 (291)
T 3ois_A 165 SKKPSDQCYKDAQNYKITEYSRVAQ-DIDHLKACLAVGSPFVFGFSVY-NSWVGNNSLPVRIPLPTKNDTLEGGHAVLCV 242 (291)
T ss_dssp GSCCCHHHHHHHGGGCCCEEEECCS-CHHHHHHHHHTTCCEEEEEEEE-HHHHGGGCCCSBCCCCCTTSCEEEEEEEEEE
T ss_pred cCCCCHHHHhhcccceeccEEEcCc-CHHHHHHHHHcCCCEEEEEEec-cchhhcCCCCeEEeCCCCCCCCcCCeEEEEE
Confidence 0123567899999984 8999999999 68999999998 78999998 999887 443 359999999
Q ss_pred eecccCCCccEEEEEcCCCCCCCCCceEEEEecC
Q 047793 273 GYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDI 306 (324)
Q Consensus 273 Gyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~ 306 (324)
||| ++++|||||||||++||++|||||+|+.
T Consensus 243 Gy~---~~~~ywivkNSWG~~WG~~Gy~~i~~~~ 273 (291)
T 3ois_A 243 GYD---DEIRHFRIRNSWGNNVGEDGYFWMPYEY 273 (291)
T ss_dssp EEE---TTTTEEEEECSBCTTSTBTTEEEEEHHH
T ss_pred EEe---CCCCEEEEEeCCCCCCCCCcEEEEEHHH
Confidence 998 4678999999999999999999999985
No 41
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=100.00 E-value=1.5e-41 Score=321.99 Aligned_cols=198 Identities=17% Similarity=0.301 Sum_probs=152.1
Q ss_pred CCCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhh-cCCCccCCH----------------HHHhhhcCC---
Q 047793 105 DVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLT-TGKLISLSE----------------QELVSCDTS--- 164 (324)
Q Consensus 105 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~-~~~~~~lS~----------------q~l~~c~~~--- 164 (324)
..|..|+++....+|||+|||.||+|||||+++++|+.++++ +++.+.||+ |+|+||+..
T Consensus 47 ~~~~~F~~~~~~~~tpVknQg~cGsCWaFs~~~~le~~~~~k~~~~~~~lSe~yl~fwDKlEkan~flq~lidc~~~~~~ 126 (453)
T 2cb5_A 47 RAQHVFQHAVPQEGKPITNQKSSGRSWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEP 126 (453)
T ss_dssp HCCCCCSEECSCCCSSCCBCCBSSCHHHHHHHHHHHHHHHHHTTCSCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCceeeeeccCCCCcccCCCccchHhhhhHHHHHHHHHHHhcCCeEeeChHHHHHHHHHHHhhHHHHHHHHHHhccCC
Confidence 457788888888899999999999999999999999999998 578899999 999999753
Q ss_pred ---------CCCCCCCCCchHHHHHHHHHhCCcCCCCcccccCCC---------------------------C------c
Q 047793 165 ---------GVDHGCEGGEMEDAFKFIIHNDGITTEANYPYQAVD---------------------------G------T 202 (324)
Q Consensus 165 ---------~~~~gc~gG~~~~a~~~~~~~~Gi~~e~~yPY~~~~---------------------------~------~ 202 (324)
..+.+|+||.+..++.++.+ +|++++++|||.... + .
T Consensus 127 ~d~R~v~~l~~~~gcdGG~~~~a~~~i~k-yGl~p~~~yP~~~~s~ns~~mn~~L~~kLr~~a~~LR~~~~~g~~~~~l~ 205 (453)
T 2cb5_A 127 EDGRLVQFLLMNPANDGGQWDMLVNIVEK-YGVIPKKCFPESYTTEATRRMNDILNHKMREFCIRLRNLVHSGATKGEIS 205 (453)
T ss_dssp TTSHHHHHHHHCTTCSCBCHHHHHHHHHH-HCCCBGGGSCCCTGGGBCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred cchhhHHHhcCCCCCCCCChHHHHHHHHH-cCccchhhccccccccchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Confidence 24689999999999999975 599999999997631 1 1
Q ss_pred ----------------c----------cCCCC----------CC-------ceE--EEeeeEE-----------------
Q 047793 203 ----------------C----------NKTNE----------AS-------HVA--KIKGYET----------------- 220 (324)
Q Consensus 203 ----------------c----------~~~~~----------~~-------~~~--~i~~~~~----------------- 220 (324)
| ..... .+ ... .+.+|..
T Consensus 206 ~~k~~~l~~iy~il~~clG~pP~~F~~~~~dkd~~~~~~~~~TP~~F~~~~~~~~~~~~~yv~l~n~p~~~~py~~~y~v 285 (453)
T 2cb5_A 206 ATQDVMMEEIFRVVCICLGNPPETFTWEYRDKDKNYEKIGPITPLEFYREHVKPLFNMEDKICLVNDPRPQHKHNKLYTV 285 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCSSEEEEEECTTSCEEEEEEECHHHHHHHHTTTTSCGGGEEEEECCCCTTSCSSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCceeeEEEEccCCcccccCCCCHHHHHHHhcCCcCCCCCeEEEecCCCCcCcccceeEE
Confidence 4 11000 00 000 2233332
Q ss_pred ----------------cCCCcH-HHHHHHHH-cCCeEEEEeccCCccccccCCeeeCC-C--------------------
Q 047793 221 ----------------VPANSE-EALLKAVA-NQPVAVSIDASGSAFQFYSSGVFTGD-C-------------------- 261 (324)
Q Consensus 221 ----------------~~~~~~-~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Giy~~~-~-------------------- 261 (324)
+|.... +.++.+|. .|||.+++++.. +.++++|||+.+ |
T Consensus 286 ~~~~Nv~~g~~~~y~Nvp~~~l~~~~~~al~~g~PV~~~~Dv~~--~~~~k~GI~~~~~~~~~~~fg~~~~~m~KaeRl~ 363 (453)
T 2cb5_A 286 EYLSNMVGGRKTLYNNQPIDFLKKMVAASIKDGEAVWFGCDVGK--HFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLT 363 (453)
T ss_dssp TTCCSSTTCCCCCEEECCHHHHHHHHHHHHHTTCCEEEEECTTT--TEETTTTEECTTSBCHHHHHSCCSCSSCHHHHHH
T ss_pred eecCcccccccccccccCHHHHHHHHHHHHHcCCCEEEEEEeCh--hhccCCcEEcCccccchhhcCccccccCHHHHhh
Confidence 221111 34456777 589999999984 445699999876 3
Q ss_pred --CCCCCeEEEEeeec--ccCCCc-cEEEEEcCCCCCCCCCceEEEEec
Q 047793 262 --GTELDHGVTAVGYG--ATANGT-KYWLVKNSWGTSWGEEGYIRMKRD 305 (324)
Q Consensus 262 --~~~~~Hav~iVGyg--~~~~g~-~ywivkNSWG~~WG~~Gy~~i~~~ 305 (324)
.+..+|||+||||| .+.+|+ +|||||||||++||++|||+|+++
T Consensus 364 ~~~s~~~HAmlivGyg~~~d~~G~~~yWiVkNSWG~~wG~~GY~~ms~~ 412 (453)
T 2cb5_A 364 FGESLMTHAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYLCMTDE 412 (453)
T ss_dssp TTSCCCCEEEEEEEEEECTTSCSCEEEEEEECSBCTTSTBTTEEEEEHH
T ss_pred ccCCCCCeEEEEEEeccccccCCCccEEEEEcCcCCCcCcCceEEechh
Confidence 24579999999999 765688 999999999999999999999975
No 42
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=100.00 E-value=1.5e-40 Score=315.52 Aligned_cols=198 Identities=19% Similarity=0.267 Sum_probs=138.9
Q ss_pred CCCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhh-cCCCccCCH----------------HHHhhhcCCC--
Q 047793 105 DVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLT-TGKLISLSE----------------QELVSCDTSG-- 165 (324)
Q Consensus 105 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~-~~~~~~lS~----------------q~l~~c~~~~-- 165 (324)
..|..|+++..+.+|||||||.||+|||||+++++|+.++++ +++.+.||+ |+|++|+...
T Consensus 52 ~~~~~F~~~~~~~vtpVknQg~cGsCWaFs~~~~lE~~~~~~~~~~~~~LSe~yl~~~dklEkan~flq~lvdc~~~~~~ 131 (457)
T 2e01_A 52 QDNRVFNTVVSTDSTPVTNQKSSGRCWLFAATNQLRLNVLSELNLKEFELSQAYLFFYDKLEKANYFLDQIVSSADQDID 131 (457)
T ss_dssp HCCCCCSEECC------------CCHHHHHHHHHHHHHHHHHTTCSSCCBCHHHHHHHHHHHHHHHHHHHHHHTTTSCTT
T ss_pred CCCCceEEEecCCccCcccCCCCccchhHHhHHHHHHHHHHHhCCCceeeCChhhhhhhHHHHHHHHHHHHHHhcCCccc
Confidence 356678888888899999999999999999999999999998 788899999 7789997531
Q ss_pred --------CCCCCCCCchHHHHHHHHHhCCcCCCCcccc-cCC---------------------------------C---
Q 047793 166 --------VDHGCEGGEMEDAFKFIIHNDGITTEANYPY-QAV---------------------------------D--- 200 (324)
Q Consensus 166 --------~~~gc~gG~~~~a~~~~~~~~Gi~~e~~yPY-~~~---------------------------------~--- 200 (324)
.+.+|+||.+..++.++.+ +|++++++||| ... .
T Consensus 132 ~r~v~~l~~~~gcdGG~~~~a~~~i~k-yGivpe~~yP~~s~~s~ns~~~n~~L~~kLr~~a~~lR~~~~~~~~~~~~l~ 210 (457)
T 2e01_A 132 SRLVQYLLAAPTEDGGQYSMFLNLVKK-YGLIPKDLYGDLPYSTTASRKWNSLLTTKLREFAETLRTALKERSADDSIIV 210 (457)
T ss_dssp SHHHHHHHHCTTCSCBCHHHHHHHHHH-HCCCBGGGSCSCSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSCTTSHHHH
T ss_pred chhhhhhccCCCCCCCCHHHHHHHHHH-cCccchhhcCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhHH
Confidence 3689999999999999975 59999999999 310 0
Q ss_pred ------------------CcccCC---CC----------------C-------------C--------------ceEEE-
Q 047793 201 ------------------GTCNKT---NE----------------A-------------S--------------HVAKI- 215 (324)
Q Consensus 201 ------------------~~c~~~---~~----------------~-------------~--------------~~~~i- 215 (324)
+.|+.. .- . . ..+.|
T Consensus 211 ~~~~~~l~~iy~il~~~LG~pP~~~~~~F~~~~~dkd~~~~~~~~TP~~F~~~~v~~~~~dyV~l~n~p~~py~~~y~ve 290 (457)
T 2e01_A 211 TLREQMQREIFRLMSLFMDIPPVQPNEQFTWEYVDKDKKIHTIKSTPLEFASKYAKLDPSTPVSLINDPRHPYGKLIKID 290 (457)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCSSCTTSCEEEEEECTTSCEEEEEECHHHHHHHTTCCCTTSEEEEECCTTSCTTCEEEET
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCceEEEEEEcCCCCccCCCcChHHHHHHHcCCCchheEEEeecCCCccCeeEEEe
Confidence 011110 00 0 0 00000
Q ss_pred ----------eeeEEcCCCc-HHHHHHHHH-cCCeEEEEeccCCccccccCCeeeCCC---------------------C
Q 047793 216 ----------KGYETVPANS-EEALLKAVA-NQPVAVSIDASGSAFQFYSSGVFTGDC---------------------G 262 (324)
Q Consensus 216 ----------~~~~~~~~~~-~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Giy~~~~---------------------~ 262 (324)
..|..+|... .+.++.+|. .|||.+++++. .+.+|++|||...| .
T Consensus 291 ~~~N~~~g~~~~y~Nvp~d~l~~~~~~aL~~g~PV~~~~Dv~--~~~~~~~GI~~~~~~~~~~fg~~~~m~KaeRl~~~~ 368 (457)
T 2e01_A 291 RLGNVLGGDAVIYLNVDNETLSKLVVKRLQNNKAVFFGSHTP--KFMDKKTGVMDIELWNYPAIGYNLPQQKASRIRYHE 368 (457)
T ss_dssp TCCSSTTCCCEEEEECCHHHHHHHHHHHHHTTCCEEEEECTT--TTEETTTTEECTTSBCGGGGTCCCCCCHHHHHHTTS
T ss_pred ccCCeecCCceeEEEcCHHHHHHHHHHHHHhCCCEEEEEEcC--HhHcccCceecccccchhhcCcccccCHHHhhccCC
Confidence 0133333111 134456677 58999999998 37788999997654 2
Q ss_pred CCCCeEEEEeeecccCCCc--cEEEEEcCCCCCCCCCceEEEEec
Q 047793 263 TELDHGVTAVGYGATANGT--KYWLVKNSWGTSWGEEGYIRMKRD 305 (324)
Q Consensus 263 ~~~~Hav~iVGyg~~~~g~--~ywivkNSWG~~WG~~Gy~~i~~~ 305 (324)
+..+|||+|||||.+.+|+ +|||||||||++||++|||+|+++
T Consensus 369 s~~~HAmlivGyg~d~~G~~p~yW~VkNSWG~~wG~~GY~~ms~~ 413 (457)
T 2e01_A 369 SLMTAAMLITGCHVDETSKLPLRYRVENSWGKDSGKDGLYVMTQK 413 (457)
T ss_dssp CCCCEEEEEEEEEECTTTCCEEEEEEECSSCTTSTBTTEEEEEHH
T ss_pred CCCCeEEEEEEEEeccCCCccCEEEEEeCccCCcCCCceEEeehh
Confidence 4679999999999876788 899999999999999999999985
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=100.00 E-value=7.4e-36 Score=277.55 Aligned_cols=183 Identities=24% Similarity=0.306 Sum_probs=135.2
Q ss_pred CCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCC----------CCCCCCCCCchHHHHHHHHHhC
Q 047793 117 AVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTS----------GVDHGCEGGEMEDAFKFIIHND 186 (324)
Q Consensus 117 ~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~----------~~~~gc~gG~~~~a~~~~~~~~ 186 (324)
.++||||||.||||||||+++++|+.+.+++++.+.||+|+|++|+.. ..+.+|+||.+..++.|+.+.
T Consensus 21 ~vtpVknQg~cGsCWaFSa~~~lE~~~~~k~~~~~~LSeq~Lvdcd~~ekan~~l~~~g~~~gcdGG~~~~a~~~i~k~- 99 (383)
T 3pw3_A 21 PITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETF- 99 (383)
T ss_dssp CCCCCCBCCBSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHHHHHHHHHHHHHTTTCSCCCSCCCHHHHHHHHHHT-
T ss_pred CCCCcccCCCCcHHHHHHhHHHHHHHHHHHcCCCCccChHHHHhhchhhhhhhhhhhccCCCCCCCCCHHHHHHHHHHc-
Confidence 379999999999999999999999999999999999999999999741 235799999999999999865
Q ss_pred CcCCCCccc------ccCCCC-------------cccC--CC------------------------CCCceE--------
Q 047793 187 GITTEANYP------YQAVDG-------------TCNK--TN------------------------EASHVA-------- 213 (324)
Q Consensus 187 Gi~~e~~yP------Y~~~~~-------------~c~~--~~------------------------~~~~~~-------- 213 (324)
||+++++|| +...+. .+.. .. ..+..+
T Consensus 100 Givpe~~YP~~~~~~~~s~n~~~m~~~L~~~Lr~~a~~~~r~l~~~~~~~~~~~~~i~~il~~~LG~pP~~F~~~gk~~T 179 (383)
T 3pw3_A 100 GLVPEEEMRPGMMYADTLSNHTELSALTDAMVAAIAKGKLRKLQSDENNAMLWKKAVAAVHQIYLGVPPEKFTYKGKEYT 179 (383)
T ss_dssp CCCBGGGSCTTGGGTCSSCBCHHHHHHHHHHHHHHHSSCCSSCCBCTTCCBHHHHHHHHHHHHHHCCCCSSEEETTEEEC
T ss_pred CcCcHHhCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHhhhhhhchhhHHHHHHHHHHHHHHHhCCCCceEEecCCCcC
Confidence 999999999 221000 0000 00 000000
Q ss_pred ----------EEee----------------------------eEEcCCCcHHHHHH----HHHcC-CeEEEEeccCCccc
Q 047793 214 ----------KIKG----------------------------YETVPANSEEALLK----AVANQ-PVAVSIDASGSAFQ 250 (324)
Q Consensus 214 ----------~i~~----------------------------~~~~~~~~~~~i~~----~l~~g-PV~v~~~~~~~~f~ 250 (324)
.+.. |.++ ..+.|++ +|..| ||..+-+|....|.
T Consensus 180 P~~F~~~v~~~~~dyV~l~n~p~~py~~~y~ve~~~N~~~g~~~Nv---p~d~l~~~~~~~Lk~G~~V~fg~DV~~~~f~ 256 (383)
T 3pw3_A 180 PKSFFESTGLKASDYVSLTSYTHHPFYTQFPLEIQDNWRHGMSYNL---PLDEFMEVFDNAINTGYTIAWGSDVSESGFT 256 (383)
T ss_dssp HHHHHHHHTCCGGGEEEEECCSSSCTTCEEECCCTTCTTCCEEEEC---CHHHHHHHHHHHHHTTCCEEEEEECCSTTBC
T ss_pred HHHHHHHhCCCccceEEEeeCCCCccCceEEEecCCCccCCccCCc---CHHHHHHHHHHHHHcCCcEEEEcccCccccC
Confidence 0011 1122 2455554 44566 99999999954555
Q ss_pred cccCCeeeCC--C---------------------------------------------CCCCCeEEEEeeecccCCCccE
Q 047793 251 FYSSGVFTGD--C---------------------------------------------GTELDHGVTAVGYGATANGTKY 283 (324)
Q Consensus 251 ~y~~Giy~~~--~---------------------------------------------~~~~~Hav~iVGyg~~~~g~~y 283 (324)
+.||...+ - .+..+|||+|||||.+.+|++|
T Consensus 257 --~~Gi~~~~~~~~~~~~~g~~~~~~~~~~kaer~~~~~~~~e~~~tk~~R~~~~d~~~t~~~Ha~~ivG~~~d~~g~~y 334 (383)
T 3pw3_A 257 --RDGVAVMPDDEKVQELSGSDMAHWLKLKPEEKKLNTKPQPQKWCTQAERQLAYDNYETTDDHGMQIYGIAKDQEGNEY 334 (383)
T ss_dssp --TTSEECCBCHHHHHHHSSCCHHHHHTSCHHHHCTTTSCCCBCCCCHHHHHHHHHTTSSCCEEEEEEEEEEECTTCCEE
T ss_pred --CCceeeCcchhhHHHhcCcchhhhccCCHHHhhhccCCCcccCCCHHHHHHHhhhccCcCCeEEEEEEEEEcCCCceE
Confidence 78887321 0 1245799999999987678999
Q ss_pred EEEEcCCCCCCCCCceEEEEec
Q 047793 284 WLVKNSWGTSWGEEGYIRMKRD 305 (324)
Q Consensus 284 wivkNSWG~~WG~~Gy~~i~~~ 305 (324)
||||||||++||++||++|+++
T Consensus 335 w~vkNSWg~~~g~~Gy~~m~~~ 356 (383)
T 3pw3_A 335 YMVKNSWGTNSKYNGIWYASKA 356 (383)
T ss_dssp EEEECSBCSCSTTTTEEEEEHH
T ss_pred EEEEeCCCCCCCcCCeEEecHH
Confidence 9999999999999999999874
No 44
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=99.79 E-value=2.7e-19 Score=137.02 Aligned_cols=76 Identities=30% Similarity=0.619 Sum_probs=68.9
Q ss_pred cChhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEcccCCCCCHHHHHHhhcCccCC
Q 047793 11 LQEASLSEKHEQWMSKYGKVYKNPEEKEKRFRIFKDNVEFIESLNAAGNKPYKLSINEFADQTNQEFKAFRNGYRRP 87 (324)
Q Consensus 11 ~~~~~~~~~f~~~~~~~~k~Y~~~~e~~~r~~~f~~n~~~I~~~N~~~~~s~~~g~N~fsd~t~~E~~~~~~~~~~~ 87 (324)
..+..+...|++||++|+|.|.+..|+.+|+.||++|++.|++||++ +.+|++|+|+|+|||.+||.+++++.+.+
T Consensus 16 ~~~~~~~~~F~~wk~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~~-~~sy~lglN~FaDLT~eEF~~~~lg~~~~ 91 (106)
T 3f75_P 16 WKEAHFQDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQ-GYSYSLKMNHFGDLSRDEFRRKYLGFKKS 91 (106)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHHHHHHHHHTS-CCSEEECCCTTTTCCHHHHHHHSCCBCC-
T ss_pred cCcHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhc-CCCeeeCCcccccCCHHHHHHHHcCCCCC
Confidence 44567889999999999999999889999999999999999999996 78999999999999999999988876554
No 45
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster}
Probab=99.75 E-value=1.7e-18 Score=126.83 Aligned_cols=67 Identities=36% Similarity=0.564 Sum_probs=60.6
Q ss_pred HHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHhcC---CCCCeEEEcccCCCCCHHHHHHhhcCccC
Q 047793 18 EKHEQWMSKYGKVYKNPEEKEKRFRIFKDNVEFIESLNAA---GNKPYKLSINEFADQTNQEFKAFRNGYRR 86 (324)
Q Consensus 18 ~~f~~~~~~~~k~Y~~~~e~~~r~~~f~~n~~~I~~~N~~---~~~s~~~g~N~fsd~t~~E~~~~~~~~~~ 86 (324)
..|++|+.+|+|.|.+.+|+.+| .||.+|++.|++||++ +..+|++|+|+|+|||.+|| +.+++...
T Consensus 8 ~~f~~~k~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlT~eEf-~~~~g~~~ 77 (80)
T 2l95_A 8 EEWVEYKSKFDKNYEAEEDLMRR-RIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEF-AQRSGKKV 77 (80)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHTTGGGTSCCCCCCCCGGGTSSHHHH-HHHHTSCC
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHhccCCCCeEecCcccccCCHHHH-HHHhCCCC
Confidence 67999999999999988899999 9999999999999985 45789999999999999999 87777543
No 46
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=96.61 E-value=0.033 Score=50.17 Aligned_cols=128 Identities=19% Similarity=0.167 Sum_probs=83.0
Q ss_pred cCCCCCcchHHHHHHHHHhHHHHhhc--------CCCccCCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHhCCcCCCCc
Q 047793 122 KNQGPCGSCWAFSAVAATEGITQLTT--------GKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHNDGITTEAN 193 (324)
Q Consensus 122 ~dQg~cGsCwAfA~~~~le~~~~~~~--------~~~~~lS~q~l~~c~~~~~~~gc~gG~~~~a~~~~~~~~Gi~~e~~ 193 (324)
..||.-+=|-+||.++.|-+...... .-...+|+++|.+ .|..+...++|+. .+|..
T Consensus 201 ETQg~~pWCa~Ya~aailN~~~~t~~~nA~~iMr~~yPN~S~~~l~~----------ts~~~~q~Iky~q-syG~~---- 265 (367)
T 1x9y_A 201 EQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPN----------CATFPNQMIEYGK-SQGRD---- 265 (367)
T ss_dssp CCCSSSSCHHHHHHHHHHHHHTTCSCCCHHHHHHHHCTTSCTTTGGG----------CCCCHHHHHHHHH-HTTEE----
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhh----------cCCCHHHHHHHHH-HhCcc----
Confidence 36999999999999998876542111 0123466666655 3557788888887 43421
Q ss_pred ccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHH-cCCeEEEEeccCCccccccCCeeeCCCCCCCCeEEEEe
Q 047793 194 YPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVA-NQPVAVSIDASGSAFQFYSSGVFTGDCGTELDHGVTAV 272 (324)
Q Consensus 194 yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~Hav~iV 272 (324)
+.-.... -+.+++++.+. +-||.|.+....+. ......+|||+||
T Consensus 266 ---------------------~~~~n~~--ls~deVk~~id~Nk~I~v~~~~v~~~-----------~n~~~~gHAlavv 311 (367)
T 1x9y_A 266 ---------------------IHYQEGV--PSYNQVDQLTKDNVGIMILAQSVSQN-----------PNDPHLGHALAVV 311 (367)
T ss_dssp ---------------------EEEEESC--CCHHHHHHHHHTTCCEEEEEEETTSC-----------SSSCCCSEEEEEE
T ss_pred ---------------------hhhhcCC--CCHHHHHHHHhcCCcEEEEccccccC-----------CCCccCceeEEEE
Confidence 1111112 26778888888 67999888755211 1224578999999
Q ss_pred eecccCCCccEEEEEcCCCCCCCCCceEEEEe
Q 047793 273 GYGATANGTKYWLVKNSWGTSWGEEGYIRMKR 304 (324)
Q Consensus 273 Gyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~ 304 (324)
||-.. ++.+|.++=|=|-. +++-++.
T Consensus 312 GyA~~-~~~~~y~~WNPW~~-----~~~~~sa 337 (367)
T 1x9y_A 312 GNAKI-NDQEKLIYWNPWDT-----ELSIQDA 337 (367)
T ss_dssp EEEEE-TTEEEEEEECTTCS-----SCEEEET
T ss_pred ecccc-CCCcEEEEecCccC-----CceeecC
Confidence 99776 48899999777643 3666554
No 47
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=96.48 E-value=0.034 Score=45.33 Aligned_cols=128 Identities=18% Similarity=0.133 Sum_probs=84.8
Q ss_pred CCCCCcchHHHHHHHHHhHHHHhhc--------CCCccCCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHhCCcCCCCcc
Q 047793 123 NQGPCGSCWAFSAVAATEGITQLTT--------GKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHNDGITTEANY 194 (324)
Q Consensus 123 dQg~cGsCwAfA~~~~le~~~~~~~--------~~~~~lS~q~l~~c~~~~~~~gc~gG~~~~a~~~~~~~~Gi~~e~~y 194 (324)
.||.-+=|-+|+.++.|-+...... .-...+|+++|.+ .|..+...++|+... |-.+.
T Consensus 26 TQg~~~WCa~Y~~aAilN~~~nt~~~nA~~iMr~~yPN~s~~~l~~----------t~~~~~q~Iky~~s~-G~~~~--- 91 (183)
T 1pxv_A 26 QQFDNSWAAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPN----------CATFPNQMIEYGKSQ-GRDIH--- 91 (183)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHTCSCCCHHHHHHHHSTTSCTTTGGG----------CCBCHHHHHHHHHHT-TCCCE---
T ss_pred ccCcCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhh----------cCCCHHHHHHHHHHc-CcChh---
Confidence 6999999999999998876543211 0123566666654 356788888888733 42110
Q ss_pred cccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHH-cCCeEEEEeccCCccccccCCeeeCCCCCCCCeEEEEee
Q 047793 195 PYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVA-NQPVAVSIDASGSAFQFYSSGVFTGDCGTELDHGVTAVG 273 (324)
Q Consensus 195 PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVG 273 (324)
-..+. -+.+++++.+. +.||.+...-..+ .......+||++|||
T Consensus 92 ----------------------~~nr~--ls~neV~~~i~~Nk~I~v~~~~v~e-----------~~~~~~~gHA~av~G 136 (183)
T 1pxv_A 92 ----------------------YQEGV--PSYNQVDQLTKDNVGIMILAQSVSQ-----------NPNDPHLGHALAVVG 136 (183)
T ss_dssp ----------------------EEESC--CCHHHHHHHHHTTCCEEEEEECCCS-----------STTSCCCEEEEEEEE
T ss_pred ----------------------HhcCC--CCHHHHHHHHhcCCcEEEEcccccc-----------CCCCccCceeEEEEe
Confidence 00112 36788999998 5699877653311 223346789999999
Q ss_pred ecccCCCccEEEEEcCCCCCCCCCceEEEEec
Q 047793 274 YGATANGTKYWLVKNSWGTSWGEEGYIRMKRD 305 (324)
Q Consensus 274 yg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~ 305 (324)
|-.- ++.++.+|=|=|-. |++-++.+
T Consensus 137 ya~~-~~~~~y~~WNPW~~-----~~~~~~a~ 162 (183)
T 1pxv_A 137 NAKI-NDQEKLIYWNPWDT-----ELSIQDAD 162 (183)
T ss_dssp EEEE-TTEEEEEEECTTCS-----SCEEEETT
T ss_pred eeec-CCCeEEEEeCCccC-----CcEeecCC
Confidence 9987 47889999887743 77777654
No 48
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=96.44 E-value=0.047 Score=44.34 Aligned_cols=119 Identities=17% Similarity=0.205 Sum_probs=79.7
Q ss_pred CCCCCcchHHHHHHHHHhHHHHhhc--------CCCccCCHHHHhhhcCCCCCCCCCCCchHHHHHHHHHhCCcCCCCcc
Q 047793 123 NQGPCGSCWAFSAVAATEGITQLTT--------GKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHNDGITTEANY 194 (324)
Q Consensus 123 dQg~cGsCwAfA~~~~le~~~~~~~--------~~~~~lS~q~l~~c~~~~~~~gc~gG~~~~a~~~~~~~~Gi~~e~~y 194 (324)
.||.-+=|-+|+.++.|-+...... .-...+|+++|..+ |..+...++|+... |-..
T Consensus 17 TQg~~pWCa~Ya~aailN~~~~~~~~~A~~imr~~yPn~S~~~l~~~----------~~t~~e~iky~~s~-g~~~---- 81 (174)
T 1cv8_A 17 TQGNNGWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFT----------GLTPREMIYFGQTQ-GRSP---- 81 (174)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHTCCCCCHHHHHHHHCSSCCHHHHHHC----------CCCHHHHHHHHHHT-TCCC----
T ss_pred ccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCCHHHHhhc----------CCCHHHHHHHHHHc-CCCh----
Confidence 6999999999999999876543221 11256888888744 34567888887654 3200
Q ss_pred cccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHH-cCCeEEEEeccCCccccccCCeeeCCCCCCCCeEEEEee
Q 047793 195 PYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVA-NQPVAVSIDASGSAFQFYSSGVFTGDCGTELDHGVTAVG 273 (324)
Q Consensus 195 PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVG 273 (324)
.-.... -+.+++++.+. +-|+.+..+-. + . +.....+||++|||
T Consensus 82 ---------------------~~~n~~--ls~~eV~~~~~~nk~i~i~~~~v-e----~-------~~~~~~gHAlav~G 126 (174)
T 1cv8_A 82 ---------------------QLLNRM--TTYNEVDNLTKNNKGIAILGSRV-E----S-------RNGMHAGHAMAVVG 126 (174)
T ss_dssp ---------------------EEESSC--CCHHHHHHHHHTTCCEEEEEEES-S----C-------BTTBCCEEEEEEEE
T ss_pred ---------------------hhhcCC--CCHHHHHHHHhcCCceEEEcccc-c----C-------CCCCCCceeEEEEe
Confidence 000011 26778899998 45887766543 1 1 12245689999999
Q ss_pred ecccCCCccEEEEEcCCC
Q 047793 274 YGATANGTKYWLVKNSWG 291 (324)
Q Consensus 274 yg~~~~g~~ywivkNSWG 291 (324)
|-.-.+|.+|.++=|=|-
T Consensus 127 y~~~~ng~~~y~~WNPW~ 144 (174)
T 1cv8_A 127 NAKLNNGQEVIIIWNPWD 144 (174)
T ss_dssp EEEETTSCEEEEEECTTC
T ss_pred eeeecCCceEEEEeCCcc
Confidence 998657889999988774
No 49
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=89.34 E-value=1.6 Score=37.62 Aligned_cols=53 Identities=28% Similarity=0.408 Sum_probs=33.4
Q ss_pred cCCCcHHHHHHHHHcC-CeEEEEeccCC-----ccccc--cCCeeeCCCCCCCCeEEEEeeecc
Q 047793 221 VPANSEEALLKAVANQ-PVAVSIDASGS-----AFQFY--SSGVFTGDCGTELDHGVTAVGYGA 276 (324)
Q Consensus 221 ~~~~~~~~i~~~l~~g-PV~v~~~~~~~-----~f~~y--~~Giy~~~~~~~~~Hav~iVGyg~ 276 (324)
+...+.++|++.|.+| ||+|-....-. .|..+ .+|-... ...+|+|+|+||+.
T Consensus 127 ltG~sl~~L~~~I~~G~PVIv~~t~~~~p~~~~~~~~W~~~~G~~~~---~~~~H~VVl~GYd~ 187 (236)
T 3erv_A 127 LTGKSIEELYKSVKAGQPVVIITNATFAPLDEDEFTTWETNNGDVSI---TYNEHCVVLIGYDQ 187 (236)
T ss_dssp CTTSCHHHHHHHHHTTCCEEEEEETTSSCCCGGGCEEEEETTEEEEE---CTTEEEEEEEEECS
T ss_pred cCCCCHHHHHHHHHCCCeEEEEEeCCcccccccccceeecCCCceee---ccCCeEEEEEEEeC
Confidence 4445899999999987 99987754310 11111 1232111 23579999999985
No 50
>4d8b_A Streptopain; papain fold, cysteine protease, secreted, hydrolase; 1.06A {Streptococcus pyogenes} PDB: 4d8e_A* 4d8i_A* 2uzj_A* 2jtc_A
Probab=61.65 E-value=13 Score=32.22 Aligned_cols=54 Identities=20% Similarity=0.381 Sum_probs=36.5
Q ss_pred HHHHHHHHc-CCeEEEEeccCCccccccCCeeeCCCCCCCCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEe
Q 047793 227 EALLKAVAN-QPVAVSIDASGSAFQFYSSGVFTGDCGTELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKR 304 (324)
Q Consensus 227 ~~i~~~l~~-gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~ 304 (324)
+.|++.|.. .||.++-.- ..++||.+|=||..+ +|+-|==.||-. .+|||.+..
T Consensus 172 ~~I~~eL~~grPV~~~G~~------------------~~gGHAwViDGY~~~----~~~H~NwGWgG~--~nGYy~l~~ 226 (261)
T 4d8b_A 172 AQIDKELSQNQPVYYQGVG------------------KVGGHAFVIDGADGR----NFYHVNWGWGGV--SDGFFRLDA 226 (261)
T ss_dssp HHHHHHHHTTCCEEEEEEE------------------TTEEEEEEEEEEESS----SCEEEECSSTTT--TCEEECTTC
T ss_pred HHHHHHHHcCCCEEEEeec------------------CCCceEEEEcccccC----CEEEEEcCCCCC--CCceeeccc
Confidence 567788885 599876521 146899999999853 567664333311 589998853
No 51
>1dki_A Pyrogenic exotoxin B zymogen; cysteine protease, papain-like; 1.60A {Streptococcus pyogenes} SCOP: d.3.1.1 PDB: 1pvj_A*
Probab=55.00 E-value=28 Score=31.78 Aligned_cols=54 Identities=20% Similarity=0.381 Sum_probs=36.1
Q ss_pred HHHHHHHHc-CCeEEEEeccCCccccccCCeeeCCCCCCCCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEe
Q 047793 227 EALLKAVAN-QPVAVSIDASGSAFQFYSSGVFTGDCGTELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKR 304 (324)
Q Consensus 227 ~~i~~~l~~-gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~ 304 (324)
+.|++.|.+ .||...-.-. .++||.+|=||+.+ +||=|==.||-. .+|||.+..
T Consensus 290 ~~i~~eL~~~rPV~~~G~~~------------------~gGHAfV~DGy~~~----~~~H~NwGWgG~--~nGyy~l~~ 344 (371)
T 1dki_A 290 AQIDKELSQNQPVYYQGVGK------------------VGGHAFVIDGADGR----NFYHVNWGWGGV--SDGFFRLDA 344 (371)
T ss_dssp HHHHHHHHTTCCEEEEEEET------------------TEEEEEEEEEECSS----SEEEEECSSTTT--TCEEEESCC
T ss_pred HHHHHHHHcCCCEEEEeecC------------------CCceEEEECcccCC----CeEEEEeCcCCC--CCcceeccC
Confidence 457777884 5987643211 16899999999753 577764444422 589999863
No 52
>3bb7_A Interpain A; cysteine protease, zymogen activation, bacterial odontopatho hydrolase; 1.50A {Prevotella intermedia} PDB: 3bba_A
Probab=54.93 E-value=26 Score=31.35 Aligned_cols=59 Identities=15% Similarity=0.367 Sum_probs=36.7
Q ss_pred HHHHHHHHc-CCeEEEEeccCCccccccCCeeeCCCCCCCCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEe
Q 047793 227 EALLKAVAN-QPVAVSIDASGSAFQFYSSGVFTGDCGTELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKR 304 (324)
Q Consensus 227 ~~i~~~l~~-gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~ 304 (324)
+.|++.|.+ .||.+.-.-. .. . ...++||.+|-||..+ +||=|==.||-. .+|||.+..
T Consensus 239 ~~i~~eL~~~rPV~~~G~~~--~~------~-----~~~~GHafV~DGY~~~----~~~H~NwGWgG~--~nGyy~l~~ 298 (321)
T 3bb7_A 239 DIVFSELTKGHPLIYGGVSP--GS------M-----GQDAGHAFVIDGYNKA----GLVSVNWGWNGD--VDGYYKIDL 298 (321)
T ss_dssp HHHHHHHHTTCCEEEEEC--------------------CCCEEEEEEEECTT----SCEEEECSSTTT--TCEEECCTT
T ss_pred HHHHHHHHhCCCEEEEEecC--CC------C-----CCCCceEEEEccccCC----CeEEEecCCCCC--CCceEeccC
Confidence 457788885 6987654222 11 1 1357899999999854 577765445422 489998863
No 53
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=31.12 E-value=32 Score=30.97 Aligned_cols=40 Identities=20% Similarity=0.450 Sum_probs=0.0
Q ss_pred CeEEEEeeeccc---CCCccEEEEEcCCC-CCCC-------------------------CCceEEEEec
Q 047793 266 DHGVTAVGYGAT---ANGTKYWLVKNSWG-TSWG-------------------------EEGYIRMKRD 305 (324)
Q Consensus 266 ~Hav~iVGyg~~---~~g~~ywivkNSWG-~~WG-------------------------~~Gy~~i~~~ 305 (324)
+||-.|++.... ..+.....|||-|| ..|- ++|-|||+.+
T Consensus 246 ~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~dG~FWMs~~ 314 (339)
T 2r9f_A 246 GHAYSVTDAKQVTYQGQRVNLIRMRNPWGEVEWKGPWSDNSYEWNKVDPYEREQLRVKMEDGEFWMSFR 314 (339)
T ss_dssp TCCEEEEEEEEEEETTEEEEEEEEECTTSCCCCCSTTSTTCGGGGGSCHHHHHHHCCCCCSSEEEEEHH
T ss_pred CceEEEeEEEEEecCCCceEEEEEeCCCCCccccCCCCcCCccccccCHHHHHHhCCCCCCCEEEEEHH
No 54
>2nqa_A Calpain 8; calpain, calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC; HET: AR7; 2.20A {Homo sapiens}
Probab=24.86 E-value=49 Score=29.48 Aligned_cols=41 Identities=24% Similarity=0.537 Sum_probs=0.0
Q ss_pred CCeEEEEeeeccc---CCCccEEEEEcCCC-CCCC-------------------------CCceEEEEec
Q 047793 265 LDHGVTAVGYGAT---ANGTKYWLVKNSWG-TSWG-------------------------EEGYIRMKRD 305 (324)
Q Consensus 265 ~~Hav~iVGyg~~---~~g~~ywivkNSWG-~~WG-------------------------~~Gy~~i~~~ 305 (324)
.+||-.|++.... ..+.....|||-|| ..|- ++|-|||+.+
T Consensus 240 ~~HaYsVl~v~~v~~~~~~~~lv~lrNPWg~~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~dG~FWMs~~ 309 (326)
T 2nqa_A 240 KSHAYSVTGVEEVNFQGHPEKLIRLRNPWGEVEWSGAWSDDAPEWNHIDPRRKEELDKKVEDGEFWMSLS 309 (326)
T ss_dssp SSCCEEEEEEEEEEETTEEEEEEEEECTTCC-CCCSTTSTTCGGGGGSCHHHHHHHCCCCCSSEEEEEHH
T ss_pred cCceEEEEEEEEEecCCCceEEEEecCCCcCccccCCCCCCCccccccCHHHHHHhCCCCCCCEEEEEHH
No 55
>1ziv_A Calpain 9; cysteine protease, papain, calcium-dependent, thiol protease, structural genomics consortium, SGC, hydrolase; 2.31A {Homo sapiens} SCOP: d.3.1.3 PDB: 2p0r_A*
Probab=24.30 E-value=49 Score=29.69 Aligned_cols=40 Identities=23% Similarity=0.561 Sum_probs=0.0
Q ss_pred CeEEEEeeeccc---CCCccEEEEEcCCCC-----CCC----------------------CCceEEEEec
Q 047793 266 DHGVTAVGYGAT---ANGTKYWLVKNSWGT-----SWG----------------------EEGYIRMKRD 305 (324)
Q Consensus 266 ~Hav~iVGyg~~---~~g~~ywivkNSWG~-----~WG----------------------~~Gy~~i~~~ 305 (324)
+||-.|++.... ..+.....|||-||. .|. ++|-|||+.+
T Consensus 245 ~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~~dG~FWMs~~ 314 (339)
T 1ziv_A 245 GHAYSVTGIDQVSFRGQRIELIRIRNPWGQVEWNGSWSDSSPEWRSVGPAEQKRLCHTALDDGEFWMAFK 314 (339)
T ss_dssp TCCEEEEEEEEEEETTEEEEEEEEECCSSCCCCCSTTSTTCHHHHHSCHHHHHHTTCCCCSSSEEEEEHH
T ss_pred CeeEEEeEEEEEecCCCceEEEEecCCCCCCccCCCCCcCChhccccCHHHHHHhhCCCCCCCEEEEEHH
No 56
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=21.40 E-value=32 Score=23.61 Aligned_cols=26 Identities=12% Similarity=0.155 Sum_probs=18.9
Q ss_pred CCcccCCCCCcchHHHHHHHHHhHHHHh
Q 047793 118 VTPIKNQGPCGSCWAFSAVAATEGITQL 145 (324)
Q Consensus 118 v~pV~dQg~cGsCwAfA~~~~le~~~~~ 145 (324)
+--|+=||.|++| ......+|..+..
T Consensus 37 ~V~v~l~GaC~gc--~Tlk~gIe~~L~~ 62 (74)
T 1th5_A 37 IVKVRLTGPAAVV--RTVRIAVSKKLRE 62 (74)
T ss_dssp EEEECCCSSSSSS--SSHHHHHHHHHHH
T ss_pred EEEEEEecCCcch--HHHHHHHHHHHHH
Confidence 4568889999999 3444578877663
Done!