BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>047795
MSAQLSKTDSEASSLSQSSPIRSPRRPVYYVQSPSRDSHDGEKTTNSFHSTPVLSPMGSP
PHSHSNSSLGPHSSRESSSSASLKPQHHRKNERKSRKPWKEFDAIEEEGLLDGETIHRAL
SRRCYLLTFVVGFIVLFSMFSLILWGASKPQKPTIRMKSISFNQFVVQAGADFSGVATQM
VTVNCTVKFTFRNTATFFGVHVTSTPLDLYYSQLTVATGTIRKFYQSRKSQRSVTVMMKG
SHIPLYGGGASLSSLNGALVEPVPLTLNFMVRARAYVLGRLVKPKFYKRIECSVIMDPKK
MNVGISLKNNCTYH

High Scoring Gene Products

Symbol, full name Information P value
AT5G42860 protein from Arabidopsis thaliana 3.7e-73
AT1G45688 protein from Arabidopsis thaliana 3.3e-71
AT2G41990 protein from Arabidopsis thaliana 1.3e-36
AT4G35170 protein from Arabidopsis thaliana 4.6e-34
AT3G08490 protein from Arabidopsis thaliana 7.6e-14
NHL25
AT5G36970
protein from Arabidopsis thaliana 0.00087

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  047795
        (314 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2160026 - symbol:AT5G42860 "AT5G42860" species...   464  3.7e-73   3
TAIR|locus:2825837 - symbol:AT1G45688 "AT1G45688" species...   569  3.3e-71   2
TAIR|locus:2064637 - symbol:AT2G41990 "AT2G41990" species...   349  1.3e-36   2
TAIR|locus:2132811 - symbol:AT4G35170 "AT4G35170" species...   370  4.6e-34   1
TAIR|locus:2103454 - symbol:AT3G08490 "AT3G08490" species...   172  7.6e-14   2
TAIR|locus:2167489 - symbol:NHL25 "AT5G36970" species:370...   108  0.00087   1


>TAIR|locus:2160026 [details] [associations]
            symbol:AT5G42860 "AT5G42860" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005886 "plasma membrane" evidence=IDA]
            GO:GO:0005886 EMBL:CP002688 EMBL:AB008264 ProtClustDB:CLSN2686629
            EMBL:AK227557 IPI:IPI00525741 RefSeq:NP_199100.1 UniGene:At.6518
            UniGene:At.71339 ProteinModelPortal:Q9FMN3
            EnsemblPlants:AT5G42860.1 GeneID:834297 KEGG:ath:AT5G42860
            TAIR:At5g42860 InParanoid:Q9FMN3 OMA:SGSIKKF PhylomeDB:Q9FMN3
            Genevestigator:Q9FMN3 Uniprot:Q9FMN3
        Length = 320

 Score = 464 (168.4 bits), Expect = 3.7e-73, Sum P(3) = 3.7e-73
 Identities = 89/155 (57%), Positives = 117/155 (75%)

Query:    91 NERKSRKPWKEFDAIEEEGLLD-GETIHRALSRRCYLLTFVVGFIVLFSMFSLILWGASK 149
             ++RK     K+F  IEEEGLLD G+    AL RRCY+L F+VGF +LF+ FSLIL+ A+K
Sbjct:    74 SKRKGHAGEKQFAMIEEEGLLDDGDREQEALPRRCYVLAFIVGFSLLFAFFSLILYAAAK 133

Query:   150 PQKPTIRMKSISFNQFVVQAGADFSGVATQMVTVNCTVKFTFRNTATFFGVHVTSTPLDL 209
             PQKP I +KSI+F Q  VQAG D  G+ T M+T+N T++  +RNT TFFGVHVTS+P+DL
Sbjct:   134 PQKPKISVKSITFEQLKVQAGQDAGGIGTDMITMNATLRMLYRNTGTFFGVHVTSSPIDL 193

Query:   210 YYSQLTVATGTIRKFYQSRKSQRSVTVMMKGSHIP 244
              +SQ+T+ +G+I+KFYQSRKSQR+V V + G  IP
Sbjct:   194 SFSQITIGSGSIKKFYQSRKSQRTVVVNVLGDKIP 228

 Score = 168 (64.2 bits), Expect = 3.7e-73, Sum P(3) = 3.7e-73
 Identities = 31/51 (60%), Positives = 40/51 (78%)

Query:   262 PVPLTLNFMVRARAYVLGRLVKPKFYKRIECSVIMDPKKMNVGISLKNNCT 312
             PVP+ LNF VR+RAYVLG+LV+PKFYKRI C +  + KK++  I + NNCT
Sbjct:   266 PVPMRLNFTVRSRAYVLGKLVQPKFYKRIVCLINFEHKKLSKHIPITNNCT 316

 Score = 138 (53.6 bits), Expect = 3.7e-73, Sum P(3) = 3.7e-73
 Identities = 27/48 (56%), Positives = 29/48 (60%)

Query:     6 SKTDSEAXXXXXXXXXXXXXXXVYYVQSPSRDSHDGEKTTNSFHSTPV 53
             +KTDSE                 Y+VQSPSRDSHDGEKT  SFHSTPV
Sbjct:     3 AKTDSEVTSLSASSPTRSPRRPAYFVQSPSRDSHDGEKTATSFHSTPV 50


>TAIR|locus:2825837 [details] [associations]
            symbol:AT1G45688 "AT1G45688" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0048767 "root hair elongation" evidence=RCA] EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005886 EMBL:AC083835
            HOGENOM:HOG000240810 EMBL:AY099826 EMBL:AY088597 EMBL:BT000323
            EMBL:AK221686 IPI:IPI00531270 PIR:A96511 RefSeq:NP_564495.1
            UniGene:At.22272 ProteinModelPortal:Q9C636 PRIDE:Q9C636
            EnsemblPlants:AT1G45688.1 GeneID:841102 KEGG:ath:AT1G45688
            TAIR:At1g45688 eggNOG:NOG330557 InParanoid:Q9C636 OMA:KECAVIE
            PhylomeDB:Q9C636 ProtClustDB:CLSN2686629 ArrayExpress:Q9C636
            Genevestigator:Q9C636 Uniprot:Q9C636
        Length = 342

 Score = 569 (205.4 bits), Expect = 3.3e-71, Sum P(2) = 3.3e-71
 Identities = 117/247 (47%), Positives = 145/247 (58%)

Query:     6 SKTDSEAXXXXXXXXXXXXXXXVYYVQSPSRDSHDGEKTTNSFHSTPVXXXXXXXXXXXX 65
             +KTDSE                VYYVQSPSRDSHDGEKT  SFHSTPV            
Sbjct:     3 AKTDSEVTSLAASSPARSPRRPVYYVQSPSRDSHDGEKTATSFHSTPVLSPMGSPPHSHS 62

Query:    66 XXXXXXXXXXXXXXXXXLKPQHHRKN-----ERKSR---KPWKEFDAIEEEGLLDGETIH 117
                              LKP   + N     +RK     K WKE   IEEEGLLD     
Sbjct:    63 SMGRHSRESSSSRFSGSLKPGSRKVNPNDGSKRKGHGGEKQWKECAVIEEEGLLDDGDRD 122

Query:   118 RALSRRCYLLTFVVGFIVLFSMFSLILWGASKPQKPTIRMKSISFNQFVVQAGADFSGVA 177
               + RRCY+L F+VGF +LF  FSLIL+GA+KP KP I +KSI+F    +QAG D  GV 
Sbjct:   123 GGVPRRCYVLAFIVGFFILFGFFSLILYGAAKPMKPKITVKSITFETLKIQAGQDAGGVG 182

Query:   178 TQMVTVNCTVKFTFRNTATFFGVHVTSTPLDLYYSQLTVATGTIRKFYQSRKSQRSVTVM 237
             T M+T+N T++  +RNT TFFGVHVTSTP+DL +SQ+ + +G+++KFYQ RKS+R+V V 
Sbjct:   183 TDMITMNATLRMLYRNTGTFFGVHVTSTPIDLSFSQIKIGSGSVKKFYQGRKSERTVLVH 242

Query:   238 MKGSHIP 244
             + G  IP
Sbjct:   243 VIGEKIP 249

 Score = 170 (64.9 bits), Expect = 3.3e-71, Sum P(2) = 3.3e-71
 Identities = 30/51 (58%), Positives = 41/51 (80%)

Query:   262 PVPLTLNFMVRARAYVLGRLVKPKFYKRIECSVIMDPKKMNVGISLKNNCT 312
             PVP+TL+F+VR+RAYVLG+LV+PKFYK+IEC +  + K +N  I +  NCT
Sbjct:   288 PVPMTLSFVVRSRAYVLGKLVQPKFYKKIECDINFEHKNLNKHIVITKNCT 338


>TAIR|locus:2064637 [details] [associations]
            symbol:AT2G41990 "AT2G41990" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR004864 EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:U90439 Pfam:PF03168 EMBL:BT024714
            IPI:IPI00520778 PIR:F84848 RefSeq:NP_181730.1 UniGene:At.28028
            UniGene:At.68133 ProteinModelPortal:P93747 PRIDE:P93747
            EnsemblPlants:AT2G41990.1 GeneID:818799 KEGG:ath:AT2G41990
            TAIR:At2g41990 eggNOG:NOG322550 HOGENOM:HOG000240810
            InParanoid:P93747 OMA:YKSIRER PhylomeDB:P93747
            ProtClustDB:CLSN2683806 ArrayExpress:P93747 Genevestigator:P93747
            Uniprot:P93747
        Length = 297

 Score = 349 (127.9 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
 Identities = 74/189 (39%), Positives = 110/189 (58%)

Query:   123 RCYLLTFVVGFIVLFSMFSLILWGASKPQKPTIRMKSISFNQFVVQAGADFSGVATQMVT 182
             R Y+   ++  I LF++FSLILWGASK   P + +K +      +QAG D SGV T M++
Sbjct:   113 RLYVW-LLLSVIFLFTVFSLILWGASKSYPPKVTVKGMLVRDLNLQAGNDLSGVPTDMLS 171

Query:   183 VNCTVKFTFRNTATFFGVHVTSTPLDLYYSQLTVATGTIRKFYQSRKSQRSVTVMMKGSH 242
             +N TV+  +RN +TFF VHVT++PL L+YS L +++G + KF   R  + +V  +++G  
Sbjct:   172 LNSTVRIYYRNPSTFFAVHVTASPLLLHYSNLLLSSGEMNKFTVGRNGETNVVTVVQGHQ 231

Query:   243 IPXXXXXXXXXXXXXXXVEPVPLTLNFMVRARAYVLGRLVKPKFYKRIECSVIMDPKKMN 302
             IP                  +PL L  ++ ++AY+LGRLV  KFY RI CS  +D   + 
Sbjct:   232 IPLYGGVSFHLDTLS-----LPLNLTIVLHSKAYILGRLVTSKFYTRIICSFTLDANHLP 286

Query:   303 VGISLKNNC 311
               ISL  +C
Sbjct:   287 KSISLLRSC 295

 Score = 61 (26.5 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
 Identities = 17/40 (42%), Positives = 20/40 (50%)

Query:     6 SKTDSEAXXXXXXXXX--XXXXXXVYYVQSPSRDSHDGEK 43
             +KTDSEA                 +YYVQSPS  +HD EK
Sbjct:     3 AKTDSEATSIDAAALSPPRSAIRPLYYVQSPS--NHDVEK 40


>TAIR|locus:2132811 [details] [associations]
            symbol:AT4G35170 "AT4G35170" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR004864 EMBL:CP002687
            GenomeReviews:CT486007_GR Pfam:PF03168 UniGene:At.31436
            UniGene:At.70694 HOGENOM:HOG000240810 EMBL:AY924829 EMBL:DQ132714
            IPI:IPI00542280 RefSeq:NP_195243.2 UniGene:At.69097
            ProteinModelPortal:Q5BPJ9 EnsemblPlants:AT4G35170.1 GeneID:829670
            KEGG:ath:AT4G35170 TAIR:At4g35170 eggNOG:NOG259526 OMA:NIKCSIT
            PhylomeDB:Q5BPJ9 ProtClustDB:CLSN2913970 Genevestigator:Q5BPJ9
            Uniprot:Q5BPJ9
        Length = 299

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 87/213 (40%), Positives = 118/213 (55%)

Query:   106 EEEGLLDG-ETIHRALSR--RCYLLTFVVGFIVLFSMFSLILWGASKPQKPTIRMKSISF 162
             E+   +DG +   R ++R   C L T V+ F    ++F LILWG SK   P   +K +  
Sbjct:    91 EDYDEMDGPDEKRRRITRFYSCLLFTLVLAF----TLFCLILWGVSKSFAPIATLKEMVL 146

Query:   163 NQFVVQAGADFSGVATQMVTVNCTVKFTFRNTATFFGVHVTSTPLDLYYSQLTVATGTIR 222
                 VQ+G D SGV T M+T+N TV+  +RN ATFF VHVTS PL L YSQL +A+G + 
Sbjct:   147 ENLNVQSGNDQSGVLTDMLTLNSTVRILYRNPATFFTVHVTSAPLQLSYSQLILASGQMG 206

Query:   223 KFYQSRKSQRSVTVMMKGSHIPXXXXXXXXXXXXXXXVEPV-PLTLNFMVRARAYVLGRL 281
             +F Q RKS+R +   + G  IP                + V PL L F +RARAYVLGRL
Sbjct:   207 EFSQRRKSERIIETKVFGDQIPLYGGVPALFGQRAEPDQVVLPLNLTFTLRARAYVLGRL 266

Query:   282 VKPKFYKRIECSVIMDPKKMNVGISLKNNCTYH 314
             VK  F+  I+CS+     K+   + L  +C+ H
Sbjct:   267 VKTTFHSNIKCSITFYGDKLGKTLDLSKSCSDH 299


>TAIR|locus:2103454 [details] [associations]
            symbol:AT3G08490 "AT3G08490" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC074395
            EMBL:AY600564 EMBL:AY649300 IPI:IPI00533756 RefSeq:NP_187462.1
            UniGene:At.50830 ProteinModelPortal:Q9C6U2
            EnsemblPlants:AT3G08490.1 GeneID:819996 KEGG:ath:AT3G08490
            TAIR:At3g08490 eggNOG:NOG296339 HOGENOM:HOG000239860
            InParanoid:Q9C6U2 OMA:ERREDHY PhylomeDB:Q9C6U2
            ProtClustDB:CLSN2684947 ArrayExpress:Q9C6U2 Genevestigator:Q9C6U2
            Uniprot:Q9C6U2
        Length = 271

 Score = 172 (65.6 bits), Expect = 7.6e-14, Sum P(2) = 7.6e-14
 Identities = 42/194 (21%), Positives = 88/194 (45%)

Query:   121 SRRCYLLTFVVGFIVLFSM--FSLILWGASKPQKPTIRMKSISFNQFVVQAGADFSGVAT 178
             S   + +   VG+  LFS+    L+ + A++P  P I  +   FNQF+++ G D  GV+T
Sbjct:    75 SNSSWWIVLQVGWRFLFSLGVALLVFYIATQPPHPNISFRIGRFNQFMLEEGVDSHGVST 134

Query:   179 QMVTVNCTVKFTFRNTATFFGVHVTSTPLDLYYSQLTVATGTIRKFYQSRKSQRSVTVMM 238
             + +T NC+ K    N +  FG+H+    +  ++  L  A     K Y       +  + +
Sbjct:   135 KFLTFNCSTKLIIDNKSNVFGLHIHPPSIKFFFGPLNFAKAQGPKLYGLSHESTTFQLYI 194

Query:   239 KGSHIPXXXXXXXXXXXXXXXVEPVPLTLNFMVRARAYVLGRLVKPKFYKRIECSVIMDP 298
               ++                    +PL L   + +   V+  ++ PK++ ++EC +++  
Sbjct:   195 ATTNRAMYGAGTEMNDMLLSRAG-LPLILRTSIISDYRVVWNIINPKYHHKVECLLLLAD 253

Query:   299 KKMNVGISL-KNNC 311
             K+ +  +++ +  C
Sbjct:   254 KERHSHVTMIREKC 267

 Score = 46 (21.3 bits), Expect = 7.6e-14, Sum P(2) = 7.6e-14
 Identities = 10/19 (52%), Positives = 11/19 (57%)

Query:    29 YYVQSPSRDSHDGEKTTNS 47
             Y+VQSPS   HD E    S
Sbjct:    11 YFVQSPSTVFHDPESEFQS 29


>TAIR|locus:2167489 [details] [associations]
            symbol:NHL25 "AT5G36970" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0009814 "defense response,
            incompatible interaction" evidence=IEP] [GO:0009863 "salicylic acid
            mediated signaling pathway" evidence=IEP] InterPro:IPR004864
            EMBL:CP002688 GO:GO:0009863 Pfam:PF03168 GO:GO:0009814
            IPI:IPI00543683 RefSeq:NP_198513.1 UniGene:At.55170
            ProteinModelPortal:F4K5V1 EnsemblPlants:AT5G36970.1 GeneID:833667
            KEGG:ath:AT5G36970 OMA:HENTTII Uniprot:F4K5V1
        Length = 248

 Score = 108 (43.1 bits), Expect = 0.00087, P = 0.00087
 Identities = 44/192 (22%), Positives = 76/192 (39%)

Query:   124 CYLLTFVVGFIVLFSMFSLILWGASKPQKPTIRMKSISFNQFVVQAGADFSGVATQMVTV 183
             CY L  +   IV+      IL+   +P+ P   +  +   +F  Q   D S ++T     
Sbjct:    63 CYTLLVLFLLIVIVGAIVGILYLVFRPKFPDYNIDRLQLTRF--QLNQDLS-LSTAF--- 116

Query:   184 NCTVKFTFRNTATFFGVHVTS-TPLDLYYSQLTVATGTIRKFYQSRKSQRSVTVMMKGSH 242
             N T+  T +N     G++    + + + Y Q  ++ G++ KFYQ  ++   + V M G  
Sbjct:   117 NVTI--TAKNPNEKIGIYYEDGSKISVLYMQTRISNGSLPKFYQGHENTTIILVEMTG-F 173

Query:   243 IPXXXXXXXXXXXXXXXVEPVPLTLNFMVRARAYVLGRLVKPKFYKRIECSVIMDPKKMN 302
                                 +PL +      R   LG+L   K    + C V +D    N
Sbjct:   174 TQNATSLMTTLQEQQRLTGSIPLRIRVTQPVRIK-LGKLKLMKVRFLVRCGVSVDSLAAN 232

Query:   303 VGISLKN-NCTY 313
               I +++ NC Y
Sbjct:   233 SVIRVRSSNCKY 244


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.133   0.394    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      314       255   0.00085  114 3  11 22  0.41    33
                                                     32  0.48    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  182 KB (2105 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.56u 0.17s 17.73t   Elapsed:  00:00:01
  Total cpu time:  17.57u 0.17s 17.74t   Elapsed:  00:00:01
  Start:  Mon May 20 18:23:14 2013   End:  Mon May 20 18:23:15 2013

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