BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047800
(547 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 116/227 (51%), Gaps = 19/227 (8%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNC---SLDIFQRLNSMIDVALALEYMHFGYSAPV 383
C LI +Y +G+L+++LY + S+ QRL I A L Y+H + +
Sbjct: 104 CDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAI 160
Query: 384 IHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLATIGYMAPEYGREGRVSA 441
IH D+K+ N+LLD+N V ++DFGI+K G DQ+ T+GY+ PEY +GR++
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTE 220
Query: 442 NGDVYSFGIMLMKTFIGKKPTDEIFNEEMT-LKHW-VNDWLPISIMEVIDANLLSREDIH 499
DVYSFG++L + + + EM L W V + +++D NL +
Sbjct: 221 KSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK---- 276
Query: 500 FVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRL---LKIIESLL 543
+ E F + A++C S E R + +++ +L L++ ES++
Sbjct: 277 -IRPESLRKF-GDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESVI 321
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 116/227 (51%), Gaps = 19/227 (8%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNC---SLDIFQRLNSMIDVALALEYMHFGYSAPV 383
C LI +Y +G+L+++LY + S+ QRL I A L Y+H + +
Sbjct: 104 CDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAI 160
Query: 384 IHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTL--ATIGYMAPEYGREGRVSA 441
IH D+K+ N+LLD+N V ++DFGI+K G + T + T+GY+ PEY +GR++
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTE 220
Query: 442 NGDVYSFGIMLMKTFIGKKPTDEIFNEEMT-LKHW-VNDWLPISIMEVIDANLLSREDIH 499
DVYSFG++L + + + EM L W V + +++D NL +
Sbjct: 221 KSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK---- 276
Query: 500 FVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRL---LKIIESLL 543
+ E F + A++C S E R + +++ +L L++ ES++
Sbjct: 277 -IRPESLRKF-GDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESVI 321
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 12/216 (5%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCS---LDIFQRLNSMIDVALALEYMHFGYSAPV 383
C + L+ Y +GS+ L S LD +R + A L Y+H +
Sbjct: 104 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKI 163
Query: 384 IHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSM-TQTQTLATIGYMAPEYGREGRVSAN 442
IH D+KA N+LLD+ A + DFG+AK + + TIG++APEY G+ S
Sbjct: 164 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEK 223
Query: 443 GDVYSFGIMLMKTFIGKKPTDEIF---NEEMTLKHWVNDWLPISIMEVIDANLLSREDIH 499
DV+ +G+ML++ G++ D ++++ L WV L +E L D+
Sbjct: 224 TDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEA-----LVDVDLQ 278
Query: 500 FVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRL 535
K++ + + +A+ CT SP +R E+V L
Sbjct: 279 GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 12/216 (5%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCS---LDIFQRLNSMIDVALALEYMHFGYSAPV 383
C + L+ Y +GS+ L S LD +R + A L Y+H +
Sbjct: 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKI 155
Query: 384 IHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSM-TQTQTLATIGYMAPEYGREGRVSAN 442
IH D+KA N+LLD+ A + DFG+AK + + IG++APEY G+ S
Sbjct: 156 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEK 215
Query: 443 GDVYSFGIMLMKTFIGKKPTDEIF---NEEMTLKHWVNDWLPISIMEVIDANLLSREDIH 499
DV+ +G+ML++ G++ D ++++ L WV L +E L D+
Sbjct: 216 TDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEA-----LVDVDLQ 270
Query: 500 FVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRL 535
K++ + + +A+ CT SP +R E+V L
Sbjct: 271 GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 118/298 (39%), Gaps = 38/298 (12%)
Query: 1 EIPPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYXXXXXXXXXXTIPRFIFN 60
EIP E+ + LE L N L G +P+ + N + L + L IP++I
Sbjct: 454 EIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISL----SNNRLTGEIPKWIGR 509
Query: 61 SSKLSILSLAKNSFSSFIPNTFGNLRNLNELALH----NNYXXXXXXXXXXXXXXXXXXX 116
L+IL L+ NSFS IP G+ R+L L L+ N
Sbjct: 510 LENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAG 569
Query: 117 XXHIGLSNNPLDGILHRT-----YMGNLSHSL-EFFVMSYCN------------------ 152
++ + N+ + H + G S L + CN
Sbjct: 570 KRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNG 629
Query: 153 DILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDXXXXXXXX 212
+++LD+S N L+G +P EIG++ L ++ G+N + GSIP+ GD
Sbjct: 630 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNL------GHNDISGSIPDEVGDLRGLNILD 683
Query: 213 XXXXXXXGAIPISLEKLSYLDDLDLSFNKLEGEILRGGSFGNFLVELFEGNKLLYGSP 270
G IP ++ L+ L ++DLS N L G I G F F F N L G P
Sbjct: 684 LSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP 741
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 22/183 (12%)
Query: 1 EIPPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYXXXXXXXXXXTIPRFIFN 60
+IPP + N L L N L G +P+++ +LS L+ L+L+ IP+ +
Sbjct: 406 KIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLW----LNMLEGEIPQELMY 461
Query: 61 SSKLSILSLAKNSFSSFIPNTFGNLRNLNELALHNNYXXXXXXXXXXXXXXXXXXXXXHI 120
L L L N + IP+ N NLN ++L NN +
Sbjct: 462 VKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAI-----L 516
Query: 121 GLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVG 180
LSNN ++ GN+ L C +++LDL++N G +P + G +
Sbjct: 517 KLSNN--------SFSGNIPAEL-----GDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIA 563
Query: 181 VDF 183
+F
Sbjct: 564 ANF 566
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 98/279 (35%), Gaps = 43/279 (15%)
Query: 4 PEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYXXXXXXXXXXTIPRFIFNSSK 63
P +G+ L++L NKL G I + LK L + IP S
Sbjct: 214 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNI----SSNQFVGPIPPLPLKS-- 267
Query: 64 LSILSLAKNSFSSFIPNTF-GNLRNLNELALHNNYXXXXXXXXXXXXXXXXXXXXXHIGL 122
L LSLA+N F+ IP+ G L L L N+
Sbjct: 268 LQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNF 327
Query: 123 SNN-PLDGILH-----------RTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGP-LP 169
S P+D +L + G L SL S +L LDLSSN +GP LP
Sbjct: 328 SGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSAS----LLTLDLSSNNFSGPILP 383
Query: 170 LEIGNLKGLVGVDFSMNN-FSG------------------YNKLQGSIPESFGDXXXXXX 210
N K + + NN F+G +N L G+IP S G
Sbjct: 384 NLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRD 443
Query: 211 XXXXXXXXXGAIPISLEKLSYLDDLDLSFNKLEGEILRG 249
G IP L + L+ L L FN L GEI G
Sbjct: 444 LKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSG 482
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 147 VMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDXX 206
+S C++++ L LS N+L+G +P +G+L L + +N L+G IP+
Sbjct: 410 TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLN------MLEGEIPQELMYVK 463
Query: 207 XXXXXXXXXXXXXGAIPISLEKLSYLDDLDLSFNKLEGEILR 248
G IP L + L+ + LS N+L GEI +
Sbjct: 464 TLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK 505
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 118/298 (39%), Gaps = 38/298 (12%)
Query: 1 EIPPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYXXXXXXXXXXTIPRFIFN 60
EIP E+ + LE L N L G +P+ + N + L + L IP++I
Sbjct: 457 EIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISL----SNNRLTGEIPKWIGR 512
Query: 61 SSKLSILSLAKNSFSSFIPNTFGNLRNLNELALH----NNYXXXXXXXXXXXXXXXXXXX 116
L+IL L+ NSFS IP G+ R+L L L+ N
Sbjct: 513 LENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAG 572
Query: 117 XXHIGLSNNPLDGILHRT-----YMGNLSHSL-EFFVMSYCN------------------ 152
++ + N+ + H + G S L + CN
Sbjct: 573 KRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNG 632
Query: 153 DILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDXXXXXXXX 212
+++LD+S N L+G +P EIG++ L ++ G+N + GSIP+ GD
Sbjct: 633 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNL------GHNDISGSIPDEVGDLRGLNILD 686
Query: 213 XXXXXXXGAIPISLEKLSYLDDLDLSFNKLEGEILRGGSFGNFLVELFEGNKLLYGSP 270
G IP ++ L+ L ++DLS N L G I G F F F N L G P
Sbjct: 687 LSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP 744
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 22/183 (12%)
Query: 1 EIPPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYXXXXXXXXXXTIPRFIFN 60
+IPP + N L L N L G +P+++ +LS L+ L+L+ IP+ +
Sbjct: 409 KIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLW----LNMLEGEIPQELMY 464
Query: 61 SSKLSILSLAKNSFSSFIPNTFGNLRNLNELALHNNYXXXXXXXXXXXXXXXXXXXXXHI 120
L L L N + IP+ N NLN ++L NN +
Sbjct: 465 VKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAI-----L 519
Query: 121 GLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVG 180
LSNN ++ GN+ L C +++LDL++N G +P + G +
Sbjct: 520 KLSNN--------SFSGNIPAEL-----GDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIA 566
Query: 181 VDF 183
+F
Sbjct: 567 ANF 569
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 98/279 (35%), Gaps = 43/279 (15%)
Query: 4 PEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYXXXXXXXXXXTIPRFIFNSSK 63
P +G+ L++L NKL G I + LK L + IP S
Sbjct: 217 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNI----SSNQFVGPIPPLPLKS-- 270
Query: 64 LSILSLAKNSFSSFIPNTF-GNLRNLNELALHNNYXXXXXXXXXXXXXXXXXXXXXHIGL 122
L LSLA+N F+ IP+ G L L L N+
Sbjct: 271 LQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNF 330
Query: 123 SNN-PLDGILH-----------RTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGP-LP 169
S P+D +L + G L SL S +L LDLSSN +GP LP
Sbjct: 331 SGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSAS----LLTLDLSSNNFSGPILP 386
Query: 170 LEIGNLKGLVGVDFSMNN-FSG------------------YNKLQGSIPESFGDXXXXXX 210
N K + + NN F+G +N L G+IP S G
Sbjct: 387 NLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRD 446
Query: 211 XXXXXXXXXGAIPISLEKLSYLDDLDLSFNKLEGEILRG 249
G IP L + L+ L L FN L GEI G
Sbjct: 447 LKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSG 485
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 147 VMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSMNNFSGYNKLQGSIPESFGDXX 206
+S C++++ L LS N+L+G +P +G+L L + +N L+G IP+
Sbjct: 413 TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLN------MLEGEIPQELMYVK 466
Query: 207 XXXXXXXXXXXXXGAIPISLEKLSYLDDLDLSFNKLEGEILR 248
G IP L + L+ + LS N+L GEI +
Sbjct: 467 TLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK 508
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 5/149 (3%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHC 386
CS E ++ EY +G L YL S L+ Q L DV E M F S IH
Sbjct: 72 CSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVC---EGMAFLESHQFIHR 128
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK-TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDV 445
D+ A N L+D ++ +SDFG+ + +DQ ++ T + + APE + S+ DV
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDV 188
Query: 446 YSFGIMLMKTF-IGKKPTDEIFNEEMTLK 473
++FGI++ + F +GK P D N E+ LK
Sbjct: 189 WAFGILMWEVFSLGKMPYDLYTNSEVVLK 217
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 8/135 (5%)
Query: 334 ALILEYKPHGSLEKYL--YSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKAN 391
L+ Y P+GSL L G L R A + ++H + IH DIK+
Sbjct: 106 CLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSA 162
Query: 392 NVLLDDNMVAHLSDFGIAKTGED--QSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFG 449
N+LLD+ A +SDFG+A+ E Q++ ++ + T YMAPE R G ++ D+YSFG
Sbjct: 163 NILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFG 221
Query: 450 IMLMKTFIGKKPTDE 464
++L++ G DE
Sbjct: 222 VVLLEIITGLPAVDE 236
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 103/235 (43%), Gaps = 32/235 (13%)
Query: 233 DDLDLSFNKLE-GEILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLP 291
DD+D+ + L E + GSFG ++H A W + + +L
Sbjct: 30 DDMDIPWCDLNIKEKIGAGSFG--------------------TVHRAEWHGSDVAVKIL- 68
Query: 292 LRTIFMIVVILLILR---CRKRGKRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKY 348
+ F + LR KR + P NI + + +++ EY GSL +
Sbjct: 69 MEQDFHAERVNEFLREVAIMKRLRHP----NIVLFMGAVTQPPNLSIVTEYLSRGSLYRL 124
Query: 349 LYSGNC--SLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDF 406
L+ LD +RL+ DVA + Y+H + P++H D+K+ N+L+D + DF
Sbjct: 125 LHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDF 183
Query: 407 GIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
G+++ + T +MAPE R+ + DVYSFG++L + ++P
Sbjct: 184 GLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 334 ALILEYKPHGSLEKYL--YSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKAN 391
L+ Y P+GSL L G L R A + ++H + IH DIK+
Sbjct: 106 CLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSA 162
Query: 392 NVLLDDNMVAHLSDFGIAKTGED--QSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFG 449
N+LLD+ A +SDFG+A+ E Q++ + + T YMAPE R G ++ D+YSFG
Sbjct: 163 NILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFG 221
Query: 450 IMLMKTFIGKKPTDE 464
++L++ G DE
Sbjct: 222 VVLLEIITGLPAVDE 236
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 104/235 (44%), Gaps = 32/235 (13%)
Query: 233 DDLDLSFNKLE-GEILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTVLP 291
DD+D+ + L E + GSFG ++H A W + + +L
Sbjct: 30 DDMDIPWCDLNIKEKIGAGSFG--------------------TVHRAEWHGSDVAVKIL- 68
Query: 292 LRTIFMIVVILLILR---CRKRGKRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKY 348
+ F + LR KR + P NI + + +++ EY GSL +
Sbjct: 69 MEQDFHAERVNEFLREVAIMKRLRHP----NIVLFMGAVTQPPNLSIVTEYLSRGSLYRL 124
Query: 349 LYSGNC--SLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDF 406
L+ LD +RL+ DVA + Y+H + P++H ++K+ N+L+D + DF
Sbjct: 125 LHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDF 183
Query: 407 GIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
G+++ ++ T +MAPE R+ + DVYSFG++L + ++P
Sbjct: 184 GLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 78/153 (50%), Gaps = 16/153 (10%)
Query: 335 LILEYKPHGSLEKYLYS-GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
L++EY +L +Y+ S G S+D + I L+ + + ++H DIK N+
Sbjct: 88 LVMEYIEGPTLSEYIESHGPLSVDTAINFTNQI-----LDGIKHAHDMRIVHRDIKPQNI 142
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQT-QTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
L+D N + DFGIAK + S+TQT L T+ Y +PE + D+YS GI+L
Sbjct: 143 LIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVL 202
Query: 453 MKTFIGKKPTDEIFNEE----MTLKHWVNDWLP 481
+ +G+ P FN E + +KH + D +P
Sbjct: 203 YEMLVGEPP----FNGETAVSIAIKH-IQDSVP 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 334 ALILEYKPHGSLEKYL--YSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKAN 391
L+ Y P+GSL L G L R A + ++H + IH DIK+
Sbjct: 100 CLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSA 156
Query: 392 NVLLDDNMVAHLSDFGIAKTGED--QSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFG 449
N+LLD+ A +SDFG+A+ E Q + + + T YMAPE R G ++ D+YSFG
Sbjct: 157 NILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFG 215
Query: 450 IMLMKTFIGKKPTDE 464
++L++ G DE
Sbjct: 216 VVLLEIITGLPAVDE 230
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Query: 335 LILEYKPHGSLEKYL--YSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392
L+ Y P+GSL L G L R A + ++H + IH DIK+ N
Sbjct: 98 LVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSAN 154
Query: 393 VLLDDNMVAHLSDFGIAKTGED--QSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGI 450
+LLD+ A +SDFG+A+ E Q + ++ + T Y APE R G ++ D+YSFG+
Sbjct: 155 ILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGV 213
Query: 451 MLMKTFIGKKPTDE 464
+L++ G DE
Sbjct: 214 VLLEIITGLPAVDE 227
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 90/212 (42%), Gaps = 25/212 (11%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
L+ E+ HG L YL + L +DV + Y+ A VIH D+ A N
Sbjct: 81 CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNC 137
Query: 394 LLDDNMVAHLSDFGIAK-TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
L+ +N V +SDFG+ + +DQ + T T + + +PE R S+ DV+SFG+++
Sbjct: 138 LVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 197
Query: 453 MKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVF 511
+ F GK P + N E ++E I + V+
Sbjct: 198 WEVFSEGKIPYENRSNSE--------------VVEDISTGF------RLYKPRLASTHVY 237
Query: 512 NLAMECTVESPEQRINPKEIVTRLLKIIESLL 543
+ C E PE R ++ +L +I ES L
Sbjct: 238 QIMNHCWRERPEDRPAFSRLLRQLAEIAESGL 269
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 25/219 (11%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHC 386
C + L+ E+ HG L YL + L +DV + Y+ A VIH
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHR 147
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK-TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDV 445
D+ A N L+ +N V +SDFG+ + +DQ + T T + + +PE R S+ DV
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 207
Query: 446 YSFGIMLMKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKE 504
+SFG+++ + F GK P + N E ++E I
Sbjct: 208 WSFGVLMWEVFSEGKIPYENRSNSE--------------VVEDISTGF------RLYKPR 247
Query: 505 QFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543
+ V+ + C E PE R ++ +L +I ES L
Sbjct: 248 LASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 286
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 5/147 (3%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHC 386
C + L+ E+ HG L YL + L +DV + Y+ A VIH
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHR 127
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK-TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDV 445
D+ A N L+ +N V +SDFG+ + +DQ + T T + + +PE R S+ DV
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 446 YSFGIMLMKTFI-GKKPTDEIFNEEMT 471
+SFG+++ + F GK P + N E+
Sbjct: 188 WSFGVLMWEVFSEGKIPYENRSNSEVV 214
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFG 378
NI + C E L++E+ G L + L DI +N + +A + Y+H
Sbjct: 67 NIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL--VNWAVQIARGMNYLHDE 124
Query: 379 YSAPVIHCDIKANNVLLDD--------NMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
P+IH D+K++N+L+ N + ++DFG+A+ E T+ +MA
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR--EWHRTTKMSAAGAYAWMA 182
Query: 431 PEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
PE R S DV+S+G++L + G+ P
Sbjct: 183 PEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%), Gaps = 6/145 (4%)
Query: 329 NEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEY-MHFGYSAPVIHCD 387
+EE +++EY GSL +L + + RL ++D+A + M + +H D
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 388 IKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVY 446
++A N+L+ +N+V ++DFG+A+ ED T Q I + APE GR + DV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEM 470
SFGI+L + T G+ P + N E+
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREV 224
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 90/212 (42%), Gaps = 25/212 (11%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
L+ E+ HG L YL + L +DV + Y+ A VIH D+ A N
Sbjct: 78 CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNC 134
Query: 394 LLDDNMVAHLSDFGIAK-TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
L+ +N V +SDFG+ + +DQ + T T + + +PE R S+ DV+SFG+++
Sbjct: 135 LVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 194
Query: 453 MKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVF 511
+ F GK P + N E ++E I + V+
Sbjct: 195 WEVFSEGKIPYENRSNSE--------------VVEDISTGF------RLYKPRLASTHVY 234
Query: 512 NLAMECTVESPEQRINPKEIVTRLLKIIESLL 543
+ C E PE R ++ +L +I ES L
Sbjct: 235 QIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 266
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
L+ E+ HG L YL + L +DV + Y+ A VIH D+ A N
Sbjct: 76 CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNC 132
Query: 394 LLDDNMVAHLSDFGIAK-TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
L+ +N V +SDFG+ + +DQ + T T + + +PE R S+ DV+SFG+++
Sbjct: 133 LVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 192
Query: 453 MKTFI-GKKPTDEIFNEEMT 471
+ F GK P + N E+
Sbjct: 193 WEVFSEGKIPYENRSNSEVV 212
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+A A + ++F + +IH D+K N+++ + DFGIA+ D + TQT A IG
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 428 ---YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPIS 483
Y++PE R V A DVYS G +L + G+ P + + +H D +P S
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPS 240
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 102/212 (48%), Gaps = 29/212 (13%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM-HFGYSAPVIHCDIKANNV 393
+I EY +G+L+K+L + + Q + + +A ++Y+ + Y +H D+ A N+
Sbjct: 123 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY----VHRDLAARNI 178
Query: 394 LLDDNMVAHLSDFGIAKTGEDQ---SMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGI 450
L++ N+V +SDFG+++ ED + T + I + APE + ++ DV+SFGI
Sbjct: 179 LVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGI 238
Query: 451 MLMKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSF 509
++ + G++P E+ N E +M+ I+ + S
Sbjct: 239 VMWEVMTYGERPYWELSNHE--------------VMKAIN------DGFRLPTPMDCPSA 278
Query: 510 VFNLAMECTVESPEQRINPKEIVTRLLKIIES 541
++ L M+C + +R +IV+ L K+I +
Sbjct: 279 IYQLMMQCWQQERARRPKFADIVSILDKLIRA 310
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%), Gaps = 6/145 (4%)
Query: 329 NEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEY-MHFGYSAPVIHCD 387
+EE +++EY GSL +L + + RL ++D+A + M + +H D
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 388 IKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVY 446
++A N+L+ +N+V ++DFG+A+ ED T Q I + APE GR + DV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEM 470
SFGI+L + T G+ P + N E+
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREV 224
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 90/212 (42%), Gaps = 25/212 (11%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
L+ E+ HG L YL + L +DV + Y+ A VIH D+ A N
Sbjct: 79 CLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNC 135
Query: 394 LLDDNMVAHLSDFGIAK-TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
L+ +N V +SDFG+ + +DQ + T T + + +PE R S+ DV+SFG+++
Sbjct: 136 LVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 195
Query: 453 MKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVF 511
+ F GK P + N E ++E I + V+
Sbjct: 196 WEVFSEGKIPYENRSNSE--------------VVEDISTGF------RLYKPRLASTHVY 235
Query: 512 NLAMECTVESPEQRINPKEIVTRLLKIIESLL 543
+ C E PE R ++ +L +I ES L
Sbjct: 236 QIMNHCWRERPEDRPAFSRLLRQLAEIAESGL 267
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 329 NEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEY-MHFGYSAPVIHCD 387
+EE ++ EY GSL +L + + RL ++D+A + M + +H D
Sbjct: 72 SEEPIYIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 128
Query: 388 IKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVY 446
++A N+L+ +N+V ++DFG+A+ ED T Q I + APE GR + DV+
Sbjct: 129 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 188
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEM 470
SFGI+L + T G+ P + N E+
Sbjct: 189 SFGILLTELTTKGRVPYPGMVNREV 213
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 69/133 (51%), Gaps = 8/133 (6%)
Query: 335 LILEYKPHGSLEKYLYS-GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
++ EY GSL YL S G L L +DV A+EY+ +H D+ A NV
Sbjct: 77 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNV 133
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLM 453
L+ ++ VA +SDFG+ K + S TQ + + APE RE + S DV+SFGI+L
Sbjct: 134 LVSEDNVAKVSDFGLTK---EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLW 190
Query: 454 KTF-IGKKPTDEI 465
+ + G+ P I
Sbjct: 191 EIYSFGRVPYPRI 203
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 329 NEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEY-MHFGYSAPVIHCD 387
+EE ++ EY GSL +L + + RL ++D+A + M + +H D
Sbjct: 83 SEEPIYIVCEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 388 IKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVY 446
++A N+L+ +N+V ++DFG+A+ ED T Q I + APE GR + DV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEM 470
SFGI+L + T G+ P + N E+
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREV 224
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 335 LILEYKPHGSLEKYLYS-GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
++ EY GSL YL S G L L +DV A+EY+ +H D+ A NV
Sbjct: 92 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNV 148
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLM 453
L+ ++ VA +SDFG+ K + S TQ + + APE RE + S DV+SFGI+L
Sbjct: 149 LVSEDNVAKVSDFGLTK---EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLW 205
Query: 454 KTF-IGKKP------TDEIFNEEMTLKHWVNDWLPISIMEVI 488
+ + G+ P D + E K D P ++ EV+
Sbjct: 206 EIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVM 247
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 329 NEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEY-MHFGYSAPVIHCD 387
+EE ++ EY GSL +L + + RL ++D+A + M + +H D
Sbjct: 74 SEEPIYIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 130
Query: 388 IKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVY 446
++A N+L+ +N+V ++DFG+A+ ED T Q I + APE GR + DV+
Sbjct: 131 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEM 470
SFGI+L + T G+ P + N E+
Sbjct: 191 SFGILLTELTTKGRVPYPGMVNREV 215
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 329 NEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEY-MHFGYSAPVIHCD 387
+EE ++ EY GSL +L + RL ++D+A + M + +H D
Sbjct: 73 SEEPIXIVTEYMSKGSLLDFLKGETGK---YLRLPQLVDMAAQIASGMAYVERMNYVHRD 129
Query: 388 IKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVY 446
++A N+L+ +N+V ++DFG+A+ ED T Q I + APE GR + DV+
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 189
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEM 470
SFGI+L + T G+ P + N E+
Sbjct: 190 SFGILLTELTTKGRVPYPGMVNREV 214
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 329 NEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEY-MHFGYSAPVIHCD 387
+EE ++ EY GSL +L + + RL ++D+A + M + +H D
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 388 IKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVY 446
++A N+L+ +N+V ++DFG+A+ ED T Q I + APE GR + DV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEM 470
SFGI+L + T G+ P + N E+
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREV 224
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 329 NEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEY-MHFGYSAPVIHCD 387
+EE ++ EY GSL +L + + RL ++D+A + M + +H D
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 388 IKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVY 446
++A N+L+ +N+V ++DFG+A+ ED T Q I + APE GR + DV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEM 470
SFGI+L + T G+ P + N E+
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREV 224
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 69/133 (51%), Gaps = 8/133 (6%)
Query: 335 LILEYKPHGSLEKYLYS-GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
++ EY GSL YL S G L L +DV A+EY+ +H D+ A NV
Sbjct: 264 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNV 320
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLM 453
L+ ++ VA +SDFG+ K + S TQ + + APE RE + S DV+SFGI+L
Sbjct: 321 LVSEDNVAKVSDFGLTK---EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLW 377
Query: 454 KTF-IGKKPTDEI 465
+ + G+ P I
Sbjct: 378 EIYSFGRVPYPRI 390
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 14/162 (8%)
Query: 335 LILEYKPHGSLEKYLYS-GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
++ EY GSL YL S G L L +DV A+EY+ +H D+ A NV
Sbjct: 83 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNV 139
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLM 453
L+ ++ VA +SDFG+ K + S TQ + + APE RE S DV+SFGI+L
Sbjct: 140 LVSEDNVAKVSDFGLTK---EASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLW 196
Query: 454 KTF-IGKKP------TDEIFNEEMTLKHWVNDWLPISIMEVI 488
+ + G+ P D + E K D P ++ EV+
Sbjct: 197 EIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVM 238
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
A++ ++ SL K+L+ +FQ ++ A ++Y+H + +IH D+K+NN+
Sbjct: 107 AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNI 163
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQT--QTLATIGYMAPEYGR---EGRVSANGDVYSF 448
L + + + DFG+A S +Q Q ++ +MAPE R S DVYS+
Sbjct: 164 FLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSY 223
Query: 449 GIMLMKTFIGKKPTDEIFNEEMTL 472
GI+L + G+ P I N + +
Sbjct: 224 GIVLYELMTGELPYSHINNRDQII 247
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 329 NEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEY-MHFGYSAPVIHCD 387
+EE +++EY G L +L + + RL ++D+A + M + +H D
Sbjct: 83 SEEPIYIVMEYMSKGCLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 388 IKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVY 446
++A N+L+ +N+V ++DFG+A+ ED T Q I + APE GR + DV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEM 470
SFGI+L + T G+ P + N E+
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREV 224
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+A A + ++F + +IH D+K N+++ + DFGIA+ D + TQT A IG
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 428 ---YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPIS 483
Y++PE R V A DVYS G +L + G+ P + +H D +P S
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 240
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+A A + ++F + +IH D+K N+++ + DFGIA+ D + TQT A IG
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 428 ---YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPIS 483
Y++PE R V A DVYS G +L + G+ P + +H D +P S
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 240
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+A A + ++F + +IH D+K N+++ + DFGIA+ D + TQT A IG
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 428 ---YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPIS 483
Y++PE R V A DVYS G +L + G+ P + +H D +P S
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 240
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+A A + ++F + +IH D+K N+++ + DFGIA+ D + TQT A IG
Sbjct: 139 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 198
Query: 428 ---YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPIS 483
Y++PE R V A DVYS G +L + G+ P + +H D +P S
Sbjct: 199 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 257
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 329 NEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEY-MHFGYSAPVIHCD 387
+EE ++ EY GSL +L + RL ++D+A + M + +H D
Sbjct: 76 SEEPIYIVTEYMSKGSLLDFLKGETGK---YLRLPQLVDMAAQIASGMAYVERMNYVHRD 132
Query: 388 IKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVY 446
++A N+L+ +N+V ++DFG+A+ ED T Q I + APE GR + DV+
Sbjct: 133 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 192
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEM 470
SFGI+L + T G+ P + N E+
Sbjct: 193 SFGILLTELTTKGRVPYPGMVNREV 217
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 329 NEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEY-MHFGYSAPVIHCD 387
+EE ++ EY GSL +L + RL ++D+A + M + +H D
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 388 IKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVY 446
++A N+L+ +N+V ++DFG+A+ ED T Q I + APE GR + DV+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEM 470
SFGI+L + T G+ P + N E+
Sbjct: 366 SFGILLTELTTKGRVPYPGMVNREV 390
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 329 NEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEY-MHFGYSAPVIHCD 387
+EE ++ EY GSL +L + RL ++D+A + M + +H D
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 388 IKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVY 446
++A N+L+ +N+V ++DFG+A+ ED T Q I + APE GR + DV+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEM 470
SFGI+L + T G+ P + N E+
Sbjct: 366 SFGILLTELTTKGRVPYPGMVNREV 390
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 329 NEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEY-MHFGYSAPVIHCD 387
+EE ++ EY GSL +L + + RL ++D+A + M + +H D
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 388 IKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVY 446
+ A N+L+ +N+V ++DFG+A+ ED T Q I + APE GR + DV+
Sbjct: 140 LAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEM 470
SFGI+L + T G+ P + N E+
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREV 224
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 6/154 (3%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFG 378
NI + C+ ++ +++E G +L + L + L + D A +EY+
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE-- 230
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTL--ATIGYMAPEYGRE 436
S IH D+ A N L+ + V +SDFG+++ D + L + + APE
Sbjct: 231 -SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNY 289
Query: 437 GRVSANGDVYSFGIMLMKTF-IGKKPTDEIFNEE 469
GR S+ DV+SFGI+L +TF +G P + N++
Sbjct: 290 GRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ 323
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 329 NEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEY-MHFGYSAPVIHCD 387
+EE ++ EY GSL +L + + RL ++D+A + M + +H D
Sbjct: 250 SEEPIYIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 306
Query: 388 IKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVY 446
++A N+L+ +N+V ++DFG+ + ED T Q I + APE GR + DV+
Sbjct: 307 LRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 366
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEM 470
SFGI+L + T G+ P + N E+
Sbjct: 367 SFGILLTELTTKGRVPYPGMVNREV 391
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 329 NEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEY-MHFGYSAPVIHCD 387
+EE ++ EY GSL +L + RL ++D+A + M + +H D
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 388
Query: 388 IKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVY 446
++A N+L+ +N+V ++DFG+A+ ED T Q I + APE GR + DV+
Sbjct: 389 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 448
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEM 470
SFGI+L + T G+ P + N E+
Sbjct: 449 SFGILLTELTTKGRVPYPGMVNREV 473
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 329 NEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEY-MHFGYSAPVIHCD 387
+EE ++ EY G L +L + + RL ++D+A + M + +H D
Sbjct: 83 SEEPIYIVTEYMSKGCLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 388 IKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVY 446
++A N+L+ +N+V ++DFG+A+ ED T Q I + APE GR + DV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEM 470
SFGI+L + T G+ P + N E+
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREV 224
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 6/154 (3%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFG 378
NI + C+ ++ +++E G +L + L + L + D A +EY+
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE-- 230
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTL--ATIGYMAPEYGRE 436
S IH D+ A N L+ + V +SDFG+++ D + L + + APE
Sbjct: 231 -SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNY 289
Query: 437 GRVSANGDVYSFGIMLMKTF-IGKKPTDEIFNEE 469
GR S+ DV+SFGI+L +TF +G P + N++
Sbjct: 290 GRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ 323
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+A A + ++F + +IH D+K N+L+ + DFGIA+ D + QT A IG
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIG 181
Query: 428 ---YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPIS 483
Y++PE R V A DVYS G +L + G+ P + +H D +P S
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 240
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 76/141 (53%), Gaps = 9/141 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM-HFGYSAPVIHCDIKANNV 393
++ EY +GSL+ +L + + Q + + +A ++Y+ GY +H D+ A N+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNI 178
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA---TIGYMAPEYGREGRVSANGDVYSFGI 450
L++ N+V +SDFG+A+ ED T I + +PE + ++ DV+S+GI
Sbjct: 179 LINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGI 238
Query: 451 MLMKTF-IGKKPTDEIFNEEM 470
+L + G++P E+ N+++
Sbjct: 239 VLWEVMSYGERPYWEMSNQDV 259
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 329 NEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEY-MHFGYSAPVIHCD 387
+EE ++ EY GSL +L + RL ++D+A + M + +H D
Sbjct: 249 SEEPIYIVGEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 388 IKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVY 446
++A N+L+ +N+V ++DFG+A+ ED T Q I + APE GR + DV+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEM 470
SFGI+L + T G+ P + N E+
Sbjct: 366 SFGILLTELTTKGRVPYPGMVNREV 390
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 9/141 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM-HFGYSAPVIHCDIKANNV 393
++ EY +GSL+ +L + + I Q + + V + Y+ GY +H D+ A NV
Sbjct: 127 IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY----VHRDLAARNV 182
Query: 394 LLDDNMVAHLSDFGIAKTGEDQ---SMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGI 450
L+D N+V +SDFG+++ ED + T T I + APE S+ DV+SFG+
Sbjct: 183 LVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGV 242
Query: 451 MLMKTFI-GKKPTDEIFNEEM 470
++ + G++P + N ++
Sbjct: 243 VMWEVLAYGERPYWNMTNRDV 263
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 9/141 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM-HFGYSAPVIHCDIKANNV 393
++ EY +GSL+ +L + + I Q + + V + Y+ GY +H D+ A NV
Sbjct: 127 IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY----VHRDLAARNV 182
Query: 394 LLDDNMVAHLSDFGIAKTGEDQ---SMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGI 450
L+D N+V +SDFG+++ ED + T T I + APE S+ DV+SFG+
Sbjct: 183 LVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGV 242
Query: 451 MLMKTFI-GKKPTDEIFNEEM 470
++ + G++P + N ++
Sbjct: 243 VMWEVLAYGERPYWNMTNRDV 263
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 99/238 (41%), Gaps = 49/238 (20%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYS---------------GNCSLDIFQRLNSMIDVALA 371
C + + ++ EY HG L K+L + L + Q L+ +A
Sbjct: 86 CGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASG 145
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYM 429
+ Y+ S +H D+ N L+ N++ + DFG+++ D T+ I +M
Sbjct: 146 MVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 202
Query: 430 APEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIMEVI 488
PE + + DV+SFG++L + F GK+P W +S EVI
Sbjct: 203 PPESIMYRKFTTESDVWSFGVILWEIFTYGKQP-----------------WFQLSNTEVI 245
Query: 489 DANLLSR--EDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESLLK 544
+ R E KE V+++ + C P+QR+N KEI KI+ +L K
Sbjct: 246 ECITQGRVLERPRVCPKE-----VYDVMLGCWQREPQQRLNIKEI----YKILHALGK 294
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 329 NEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEY-MHFGYSAPVIHCD 387
+EE ++ EY GSL +L + RL ++D++ + M + +H D
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGK---YLRLPQLVDMSAQIASGMAYVERMNYVHRD 136
Query: 388 IKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVY 446
++A N+L+ +N+V ++DFG+A+ ED T Q I + APE GR + DV+
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEM 470
SFGI+L + T G+ P + N E+
Sbjct: 197 SFGILLTELTTKGRVPYPGMVNREV 221
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 329 NEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEY-MHFGYSAPVIHCD 387
+EE ++ EY GSL +L + RL ++D++ + M + +H D
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGK---YLRLPQLVDMSAQIASGMAYVERMNYVHRD 136
Query: 388 IKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVY 446
++A N+L+ +N+V ++DFG+A+ ED T Q I + APE GR + DV+
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEM 470
SFGI+L + T G+ P + N E+
Sbjct: 197 SFGILLTELTTKGRVPYPGMVNREV 221
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 76/141 (53%), Gaps = 9/141 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM-HFGYSAPVIHCDIKANNV 393
++ EY +GSL+ +L + + Q + + +A ++Y+ GY +H D+ A N+
Sbjct: 111 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNI 166
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA---TIGYMAPEYGREGRVSANGDVYSFGI 450
L++ N+V +SDFG+++ ED T I + +PE + ++ DV+S+GI
Sbjct: 167 LINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGI 226
Query: 451 MLMKTF-IGKKPTDEIFNEEM 470
+L + G++P E+ N+++
Sbjct: 227 VLWEVMSYGERPYWEMSNQDV 247
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 76/141 (53%), Gaps = 9/141 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM-HFGYSAPVIHCDIKANNV 393
++ EY +GSL+ +L + + Q + + +A ++Y+ GY +H D+ A N+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNI 178
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA---TIGYMAPEYGREGRVSANGDVYSFGI 450
L++ N+V +SDFG+++ ED T I + +PE + ++ DV+S+GI
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGI 238
Query: 451 MLMKTF-IGKKPTDEIFNEEM 470
+L + G++P E+ N+++
Sbjct: 239 VLWEVMSYGERPYWEMSNQDV 259
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 76/141 (53%), Gaps = 9/141 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM-HFGYSAPVIHCDIKANNV 393
++ EY +GSL+ +L + + Q + + +A ++Y+ GY +H D+ A N+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNI 178
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA---TIGYMAPEYGREGRVSANGDVYSFGI 450
L++ N+V +SDFG+++ ED T I + +PE + ++ DV+S+GI
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGI 238
Query: 451 MLMKTF-IGKKPTDEIFNEEM 470
+L + G++P E+ N+++
Sbjct: 239 VLWEVMSYGERPYWEMSNQDV 259
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 76/141 (53%), Gaps = 9/141 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM-HFGYSAPVIHCDIKANNV 393
++ EY +GSL+ +L + + Q + + +A ++Y+ GY +H D+ A N+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNI 178
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA---TIGYMAPEYGREGRVSANGDVYSFGI 450
L++ N+V +SDFG+++ ED T I + +PE + ++ DV+S+GI
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGI 238
Query: 451 MLMKTF-IGKKPTDEIFNEEM 470
+L + G++P E+ N+++
Sbjct: 239 VLWEVMSYGERPYWEMSNQDV 259
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 76/141 (53%), Gaps = 9/141 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM-HFGYSAPVIHCDIKANNV 393
++ EY +GSL+ +L + + Q + + +A ++Y+ GY +H D+ A N+
Sbjct: 94 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNI 149
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA---TIGYMAPEYGREGRVSANGDVYSFGI 450
L++ N+V +SDFG+++ ED T I + +PE + ++ DV+S+GI
Sbjct: 150 LINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGI 209
Query: 451 MLMKTF-IGKKPTDEIFNEEM 470
+L + G++P E+ N+++
Sbjct: 210 VLWEVMSYGERPYWEMSNQDV 230
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 76/141 (53%), Gaps = 9/141 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM-HFGYSAPVIHCDIKANNV 393
++ EY +GSL+ +L + + Q + + +A ++Y+ GY +H D+ A N+
Sbjct: 121 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNI 176
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA---TIGYMAPEYGREGRVSANGDVYSFGI 450
L++ N+V +SDFG+++ ED T I + +PE + ++ DV+S+GI
Sbjct: 177 LINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGI 236
Query: 451 MLMKTF-IGKKPTDEIFNEEM 470
+L + G++P E+ N+++
Sbjct: 237 VLWEVMSYGERPYWEMSNQDV 257
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 76/141 (53%), Gaps = 9/141 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM-HFGYSAPVIHCDIKANNV 393
++ EY +GSL+ +L + + Q + + +A ++Y+ GY +H D+ A N+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNI 178
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA---TIGYMAPEYGREGRVSANGDVYSFGI 450
L++ N+V +SDFG+++ ED T I + +PE + ++ DV+S+GI
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGI 238
Query: 451 MLMKTF-IGKKPTDEIFNEEM 470
+L + G++P E+ N+++
Sbjct: 239 VLWEVMSYGERPYWEMSNQDV 259
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 75/141 (53%), Gaps = 9/141 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM-HFGYSAPVIHCDIKANNV 393
++ EY +GSL+ +L + + Q + + +A ++Y+ GY +H D+ A N+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNI 178
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA---TIGYMAPEYGREGRVSANGDVYSFGI 450
L++ N+V +SDFG+ + ED T I + +PE + ++ DV+S+GI
Sbjct: 179 LINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGI 238
Query: 451 MLMKTF-IGKKPTDEIFNEEM 470
+L + G++P E+ N+++
Sbjct: 239 VLWEVMSYGERPYWEMSNQDV 259
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+I+EY GS L +G D FQ + ++ L+Y+H S IH DIKA NVL
Sbjct: 98 IIMEYLGGGSALDLLRAG--PFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVL 152
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
L + L+DFG+A D + + + T +MAPE ++ + D++S GI ++
Sbjct: 153 LSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIE 212
Query: 455 TFIGKKPTDEI 465
G+ P ++
Sbjct: 213 LAKGEPPNSDM 223
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 21/198 (10%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY GS+ + N +L + + LEY+HF IH DIKA N+L
Sbjct: 101 IVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNIL 157
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
L+ A L+DFG+A D + + T +MAPE +E + D++S GI ++
Sbjct: 158 LNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIE 217
Query: 455 TFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFNLA 514
GK P +I P+ + +I N + + F FV
Sbjct: 218 MAEGKPPYADIH--------------PMRAIFMIPTNPPPTFRKPELWSDNFTDFV---- 259
Query: 515 MECTVESPEQRINPKEIV 532
+C V+SPEQR +++
Sbjct: 260 KQCLVKSPEQRATATQLL 277
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+I E+ +GSL+ +L + + Q + + +A ++Y+ +H D+ A N+L
Sbjct: 111 IITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRDLAARNIL 167
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-----TIGYMAPEYGREGRVSANGDVYSFG 449
++ N+V +SDFG+++ ED + T T A I + APE + + ++ DV+S+G
Sbjct: 168 VNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYG 227
Query: 450 IMLMKTF-IGKKPTDEIFNEEM 470
I++ + G++P ++ N+++
Sbjct: 228 IVMWEVMSYGERPYWDMTNQDV 249
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 76/141 (53%), Gaps = 9/141 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM-HFGYSAPVIHCDIKANNV 393
++ EY +GSL+ +L + + Q + + +A ++Y+ G+ +H D+ A N+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGF----VHRDLAARNI 178
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA---TIGYMAPEYGREGRVSANGDVYSFGI 450
L++ N+V +SDFG+++ ED T I + +PE + ++ DV+S+GI
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGI 238
Query: 451 MLMKTF-IGKKPTDEIFNEEM 470
+L + G++P E+ N+++
Sbjct: 239 VLWEVMSYGERPYWEMSNQDV 259
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHC 386
C+ + +I EY +G L YL Q L DV A+EY+ S +H
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 129
Query: 387 DIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQ-TLATIGYMAPEYGREGRVSANGDV 445
D+ A N L++D V +SDFG+++ D T ++ + + + PE + S+ D+
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDI 189
Query: 446 YSFGIMLMKTF-IGKKPTDEIFNEEMTLKH 474
++FG+++ + + +GK P + N E T +H
Sbjct: 190 WAFGVLMWEIYSLGKMPYERFTNSE-TAEH 218
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 76/141 (53%), Gaps = 9/141 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM-HFGYSAPVIHCDIKANNV 393
++ EY +GSL+ +L + + Q + + ++ ++Y+ GY +H D+ A N+
Sbjct: 100 IVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGY----VHRDLAARNI 155
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA---TIGYMAPEYGREGRVSANGDVYSFGI 450
L++ N+V +SDFG+++ ED T I + APE + ++ DV+S+GI
Sbjct: 156 LINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGI 215
Query: 451 MLMKTF-IGKKPTDEIFNEEM 470
++ + G++P E+ N+++
Sbjct: 216 VMWEVVSYGERPYWEMTNQDV 236
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHC 386
C+ + +I EY +G L YL Q L DV A+EY+ S +H
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 144
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK-TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDV 445
D+ A N L++D V +SDFG+++ +D+ + + + + PE + S+ D+
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDI 204
Query: 446 YSFGIMLMKTF-IGKKPTDEIFNEEMTLKH 474
++FG+++ + + +GK P + N E T +H
Sbjct: 205 WAFGVLMWEIYSLGKMPYERFTNSE-TAEH 233
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+I+EY GS L G LD Q + ++ L+Y+H S IH DIKA NVL
Sbjct: 82 IIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVL 136
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
L ++ L+DFG+A D + + + T +MAPE ++ + D++S GI ++
Sbjct: 137 LSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 196
Query: 455 TFIGKKPTDEI 465
G+ P E+
Sbjct: 197 LARGEPPHSEL 207
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+I+EY GS L G LD Q + ++ L+Y+H S IH DIKA NVL
Sbjct: 82 IIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVL 136
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
L ++ L+DFG+A D + + + T +MAPE ++ + D++S GI ++
Sbjct: 137 LSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 196
Query: 455 TFIGKKPTDEI 465
G+ P E+
Sbjct: 197 LARGEPPHSEL 207
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+I+EY GS L G LD Q + ++ L+Y+H S IH DIKA NVL
Sbjct: 102 IIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVL 156
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
L ++ L+DFG+A D + + + T +MAPE ++ + D++S GI ++
Sbjct: 157 LSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 216
Query: 455 TFIGKKPTDEI 465
G+ P E+
Sbjct: 217 LARGEPPHSEL 227
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+I+EY GS L G LD Q + ++ L+Y+H S IH DIKA NVL
Sbjct: 97 IIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVL 151
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
L ++ L+DFG+A D + + + T +MAPE ++ + D++S GI ++
Sbjct: 152 LSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 211
Query: 455 TFIGKKPTDEI 465
G+ P E+
Sbjct: 212 LARGEPPHSEL 222
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHC 386
C+ + +I EY +G L YL Q L DV A+EY+ S +H
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 129
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK-TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDV 445
D+ A N L++D V +SDFG+++ +D+ + + + + PE + S+ D+
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 189
Query: 446 YSFGIMLMKTF-IGKKPTDEIFNEEMTLKH 474
++FG+++ + + +GK P + N E T +H
Sbjct: 190 WAFGVLMWEIYSLGKMPYERFTNSE-TAEH 218
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHC 386
C+ + +I EY +G L YL Q L DV A+EY+ S +H
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 128
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK-TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDV 445
D+ A N L++D V +SDFG+++ +D+ + + + + PE + S+ D+
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 188
Query: 446 YSFGIMLMKTF-IGKKPTDEIFNEEMTLKH 474
++FG+++ + + +GK P + N E T +H
Sbjct: 189 WAFGVLMWEIYSLGKMPYERFTNSE-TAEH 217
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHC 386
C+ + +I EY +G L YL Q L DV A+EY+ S +H
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 124
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK-TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDV 445
D+ A N L++D V +SDFG+++ +D+ + + + + PE + S+ D+
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 184
Query: 446 YSFGIMLMKTF-IGKKPTDEIFNEEMTLKH 474
++FG+++ + + +GK P + N E T +H
Sbjct: 185 WAFGVLMWEIYSLGKMPYERFTNSE-TAEH 213
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHC 386
C+ + +I EY +G L YL Q L DV A+EY+ S +H
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 144
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK-TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDV 445
D+ A N L++D V +SDFG+++ +D+ + + + + PE + S+ D+
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 204
Query: 446 YSFGIMLMKTF-IGKKPTDEIFNEEMTLKH 474
++FG+++ + + +GK P + N E T +H
Sbjct: 205 WAFGVLMWEIYSLGKMPYERFTNSE-TAEH 233
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHC 386
C+ + +I EY +G L YL Q L DV A+EY+ S +H
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 135
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK-TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDV 445
D+ A N L++D V +SDFG+++ +D+ + + + + PE + S+ D+
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 195
Query: 446 YSFGIMLMKTF-IGKKPTDEIFNEEMTLKH 474
++FG+++ + + +GK P + N E T +H
Sbjct: 196 WAFGVLMWEIYSLGKMPYERFTNSE-TAEH 224
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 6/139 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALAL-EYMHFGYSAPVIHCDIKANNV 393
+I E+ GSL +L S S Q L +ID + + E M F IH D++A N+
Sbjct: 86 IITEFMAKGSLLDFLKSDEGSK---QPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANI 142
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIML 452
L+ ++V ++DFG+A+ ED T + I + APE G + DV+SFGI+L
Sbjct: 143 LVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL 202
Query: 453 MKTFI-GKKPTDEIFNEEM 470
M+ G+ P + N E+
Sbjct: 203 MEIVTYGRIPYPGMSNPEV 221
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 78/141 (55%), Gaps = 9/141 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM-HFGYSAPVIHCDIKANNV 393
+++E+ +G+L+ +L + + Q + + +A + Y+ GY +H D+ A N+
Sbjct: 121 IVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGY----VHRDLAARNI 176
Query: 394 LLDDNMVAHLSDFGIAKTGEDQS---MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGI 450
L++ N+V +SDFG+++ ED T T + + APE + + ++ DV+S+GI
Sbjct: 177 LVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGI 236
Query: 451 MLMKTF-IGKKPTDEIFNEEM 470
++ + G++P ++ N+++
Sbjct: 237 VMWEVMSYGERPYWDMSNQDV 257
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 75/141 (53%), Gaps = 9/141 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM-HFGYSAPVIHCDIKANNV 393
++ E +GSL+ +L + + Q + + +A ++Y+ GY +H D+ A N+
Sbjct: 94 IVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNI 149
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA---TIGYMAPEYGREGRVSANGDVYSFGI 450
L++ N+V +SDFG+++ ED T I + +PE + ++ DV+S+GI
Sbjct: 150 LINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGI 209
Query: 451 MLMKTF-IGKKPTDEIFNEEM 470
+L + G++P E+ N+++
Sbjct: 210 VLWEVMSYGERPYWEMSNQDV 230
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++E+ P G L L + +L M+D+AL +EYM + P++H D+++ N+
Sbjct: 98 MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIF 156
Query: 395 ---LDDN--MVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEY--GREGRVSANGDVYS 447
LD+N + A ++DFG T + + + L +MAPE E + D YS
Sbjct: 157 LQSLDENAPVCAKVADFG---TSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYS 213
Query: 448 FGIMLMKTFIGKKPTDE 464
F ++L G+ P DE
Sbjct: 214 FAMILYTILTGEGPFDE 230
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 75/141 (53%), Gaps = 9/141 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM-HFGYSAPVIHCDIKANNV 393
++ E +GSL+ +L + + Q + + +A ++Y+ GY +H D+ A N+
Sbjct: 123 IVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNI 178
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA---TIGYMAPEYGREGRVSANGDVYSFGI 450
L++ N+V +SDFG+++ ED T I + +PE + ++ DV+S+GI
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGI 238
Query: 451 MLMKTF-IGKKPTDEIFNEEM 470
+L + G++P E+ N+++
Sbjct: 239 VLWEVMSYGERPYWEMSNQDV 259
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 13/138 (9%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++E+ P G L L + +L M+D+AL +EYM + P++H D+++ N+
Sbjct: 98 MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIF 156
Query: 395 ---LDDN--MVAHLSDFGIAKTGEDQSM-TQTQTLATIGYMAPEY--GREGRVSANGDVY 446
LD+N + A ++DFG+++ QS+ + + L +MAPE E + D Y
Sbjct: 157 LQSLDENAPVCAKVADFGLSQ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTY 212
Query: 447 SFGIMLMKTFIGKKPTDE 464
SF ++L G+ P DE
Sbjct: 213 SFAMILYTILTGEGPFDE 230
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 6/145 (4%)
Query: 329 NEEFKALILEYKPHGSLEKYLYSGNC-SLDIFQRLNSMIDVALALEYMHFGYSAPVIHCD 387
+EE ++ EY GSL +L G +L + ++ VA + Y+ IH D
Sbjct: 74 SEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRD 130
Query: 388 IKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVY 446
+++ N+L+ + ++ ++DFG+A+ ED T Q I + APE GR + DV+
Sbjct: 131 LRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 447 SFGIMLMKTFI-GKKPTDEIFNEEM 470
SFGI+L + G+ P + N E+
Sbjct: 191 SFGILLTELVTKGRVPYPGMNNREV 215
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALAL-EYMHFGYSAPVIHCDIKANNV 393
+I EY +GSL +L + + I +N ++D+A + E M F IH D++A N+
Sbjct: 86 IITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 142
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIML 452
L+ D + ++DFG+A+ ED T + I + APE G + DV+SFGI+L
Sbjct: 143 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 202
Query: 453 MKTFI-GKKPTDEIFNEEM 470
+ G+ P + N E+
Sbjct: 203 TEIVTHGRIPYPGMTNPEV 221
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALAL-EYMHFGYSAPVIHCDIKANNV 393
+I EY +GSL +L + + I +N ++D+A + E M F IH D++A N+
Sbjct: 84 IITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 140
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIML 452
L+ D + ++DFG+A+ ED T + I + APE G + DV+SFGI+L
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 453 MKTFI-GKKPTDEIFNEEM 470
+ G+ P + N E+
Sbjct: 201 TEIVTHGRIPYPGMTNPEV 219
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALAL-EYMHFGYSAPVIHCDIKANNV 393
+I EY +GSL +L + + I +N ++D+A + E M F IH D++A N+
Sbjct: 85 IITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 141
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIML 452
L+ D + ++DFG+A+ ED T + I + APE G + DV+SFGI+L
Sbjct: 142 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 201
Query: 453 MKTFI-GKKPTDEIFNEEM 470
+ G+ P + N E+
Sbjct: 202 TEIVTHGRIPYPGMTNPEV 220
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 6/139 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALAL-EYMHFGYSAPVIHCDIKANNV 393
+I E+ GSL +L S S Q L +ID + + E M F IH D++A N+
Sbjct: 259 IITEFMAKGSLLDFLKSDEGSK---QPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANI 315
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIML 452
L+ ++V ++DFG+A+ ED T + I + APE G + DV+SFGI+L
Sbjct: 316 LVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL 375
Query: 453 MKTFI-GKKPTDEIFNEEM 470
M+ G+ P + N E+
Sbjct: 376 MEIVTYGRIPYPGMSNPEV 394
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
A++ ++ SL +L+ ++ + ++ A ++Y+H + +IH D+K+NN+
Sbjct: 79 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNI 135
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQT--QTLATIGYMAPEYGR---EGRVSANGDVYSF 448
L +++ + DFG+A S + Q +I +MAPE R + S DVY+F
Sbjct: 136 FLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 195
Query: 449 GIMLMKTFIGKKPTDEIFNEEMTL 472
GI+L + G+ P I N + +
Sbjct: 196 GIVLYELMTGQLPYSNINNRDQII 219
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 77/142 (54%), Gaps = 9/142 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+I E+ +GSL+ +L + + Q + + +A ++Y+ +H + A N+L
Sbjct: 85 IITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRALAARNIL 141
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-----TIGYMAPEYGREGRVSANGDVYSFG 449
++ N+V +SDFG+++ ED + T T A I + APE + + ++ DV+S+G
Sbjct: 142 VNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYG 201
Query: 450 IMLMKTF-IGKKPTDEIFNEEM 470
I++ + G++P ++ N+++
Sbjct: 202 IVMWEVMSYGERPYWDMTNQDV 223
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
A++ ++ SL +L+ ++ + ++ A ++Y+H + +IH D+K+NN+
Sbjct: 81 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNI 137
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQT--QTLATIGYMAPEYGR---EGRVSANGDVYSF 448
L +++ + DFG+A S + Q +I +MAPE R + S DVY+F
Sbjct: 138 FLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 197
Query: 449 GIMLMKTFIGKKPTDEIFNEEMTL 472
GI+L + G+ P I N + +
Sbjct: 198 GIVLYELMTGQLPYSNINNRDQII 221
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
A++ ++ SL +L+ ++ + ++ A ++Y+H + +IH D+K+NN+
Sbjct: 84 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNI 140
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQT--QTLATIGYMAPEYGR---EGRVSANGDVYSF 448
L +++ + DFG+A S + Q +I +MAPE R + S DVY+F
Sbjct: 141 FLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 200
Query: 449 GIMLMKTFIGKKPTDEIFNEEMTL 472
GI+L + G+ P I N + +
Sbjct: 201 GIVLYELMTGQLPYSNINNRDQII 224
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
A++ ++ SL +L+ ++ + ++ A ++Y+H + +IH D+K+NN+
Sbjct: 79 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNI 135
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQT--QTLATIGYMAPEYGR---EGRVSANGDVYSF 448
L +++ + DFG+A S + Q +I +MAPE R + S DVY+F
Sbjct: 136 FLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 195
Query: 449 GIMLMKTFIGKKPTDEIFNEEMTL 472
GI+L + G+ P I N + +
Sbjct: 196 GIVLYELMTGQLPYSNINNRDQII 219
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALAL-EYMHFGYSAPVIHCDIKANNV 393
+I EY +GSL +L + + I +N ++D+A + E M F IH D++A N+
Sbjct: 84 IITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 140
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIML 452
L+ D + ++DFG+A+ ED T + I + APE G + DV+SFGI+L
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 453 MKTFI-GKKPTDEIFNEEM 470
+ G+ P + N E+
Sbjct: 201 TEIVTHGRIPYPGMTNPEV 219
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALAL-EYMHFGYSAPVIHCDIKANNV 393
+I EY +GSL +L + + I +N ++D+A + E M F IH D++A N+
Sbjct: 93 IITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 149
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIML 452
L+ D + ++DFG+A+ ED T + I + APE G + DV+SFGI+L
Sbjct: 150 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 209
Query: 453 MKTFI-GKKPTDEIFNEEM 470
+ G+ P + N E+
Sbjct: 210 TEIVTHGRIPYPGMTNPEV 228
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALAL-EYMHFGYSAPVIHCDIKANNV 393
+I EY +GSL +L + + I +N ++D+A + E M F IH D++A N+
Sbjct: 79 IITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 135
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIML 452
L+ D + ++DFG+A+ ED T + I + APE G + DV+SFGI+L
Sbjct: 136 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 195
Query: 453 MKTFI-GKKPTDEIFNEEM 470
+ G+ P + N E+
Sbjct: 196 TEIVTHGRIPYPGMTNPEV 214
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
A++ ++ SL +L+ ++ + ++ A ++Y+H + +IH D+K+NN+
Sbjct: 84 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNI 140
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQT--QTLATIGYMAPEYGR---EGRVSANGDVYSF 448
L +++ + DFG+A S + Q +I +MAPE R + S DVY+F
Sbjct: 141 FLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 200
Query: 449 GIMLMKTFIGKKPTDEIFNEEMTL 472
GI+L + G+ P I N + +
Sbjct: 201 GIVLYELMTGQLPYSNINNRDQII 224
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 19/151 (12%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLY---------------SGNCSLDIFQRLN 363
NI + +C + + L +EY PHG+L +L S +L Q L+
Sbjct: 77 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 136
Query: 364 SMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTL 423
DVA ++Y+ IH D+ A N+L+ +N VA ++DFG+++ G++ + +T
Sbjct: 137 FAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR-GQEVYVKKTMGR 192
Query: 424 ATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+ +MA E + N DV+S+G++L +
Sbjct: 193 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 223
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALAL-EYMHFGYSAPVIHCDIKANNV 393
+I EY +GSL +L + + I +N ++D+A + E M F IH D++A N+
Sbjct: 84 IITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 140
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIML 452
L+ D + ++DFG+A+ ED T + I + APE G + DV+SFGI+L
Sbjct: 141 LVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 453 MKTFI-GKKPTDEIFNEEM 470
+ G+ P + N E+
Sbjct: 201 TEIVTHGRIPYPGMTNPEV 219
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALAL-EYMHFGYSAPVIHCDIKANNV 393
+I EY +GSL +L + + I +N ++D+A + E M F IH D++A N+
Sbjct: 90 IITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 146
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIML 452
L+ D + ++DFG+A+ ED T + I + APE G + DV+SFGI+L
Sbjct: 147 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 206
Query: 453 MKTFI-GKKPTDEIFNEEM 470
+ G+ P + N E+
Sbjct: 207 TEIVTHGRIPYPGMTNPEV 225
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALAL-EYMHFGYSAPVIHCDIKANNV 393
+I EY +GSL +L + + I +N ++D+A + E M F IH D++A N+
Sbjct: 84 IITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 140
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIML 452
L+ D + ++DFG+A+ ED T + I + APE G + DV+SFGI+L
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 453 MKTFI-GKKPTDEIFNEEM 470
+ G+ P + N E+
Sbjct: 201 TEIVTHGRIPYPGMTNPEV 219
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 19/151 (12%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLY---------------SGNCSLDIFQRLN 363
NI + +C + + L +EY PHG+L +L S +L Q L+
Sbjct: 87 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 146
Query: 364 SMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTL 423
DVA ++Y+ IH D+ A N+L+ +N VA ++DFG+++ G++ + +T
Sbjct: 147 FAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR-GQEVYVKKTMGR 202
Query: 424 ATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+ +MA E + N DV+S+G++L +
Sbjct: 203 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 233
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 73/144 (50%), Gaps = 8/144 (5%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
A++ ++ SL +L+ ++ + ++ A ++Y+H + +IH D+K+NN+
Sbjct: 79 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNI 135
Query: 394 LLDDNMVAHLSDFGIA--KTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSF 448
L +++ + DFG+A K+ S Q +I +MAPE R + S DVY+F
Sbjct: 136 FLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 195
Query: 449 GIMLMKTFIGKKPTDEIFNEEMTL 472
GI+L + G+ P I N + +
Sbjct: 196 GIVLYELMTGQLPYSNINNRDQII 219
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+I EY +GSL+ +L + + Q + + + ++Y+ +H D+ A N+L
Sbjct: 107 IITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNIL 163
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLA---TIGYMAPEYGREGRVSANGDVYSFGIM 451
++ N+V +SDFG+++ ED T I + APE + ++ DV+S+GI+
Sbjct: 164 VNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV 223
Query: 452 LMKTF-IGKKPTDEIFNEEM 470
+ + G++P ++ N+++
Sbjct: 224 MWEVMSYGERPYWDMSNQDV 243
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALAL-EYMHFGYSAPVIHCDIKANNV 393
+I EY +GSL +L + + I +N ++D+A + E M F IH D++A N+
Sbjct: 89 IITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 145
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIML 452
L+ D + ++DFG+A+ ED T + I + APE G + DV+SFGI+L
Sbjct: 146 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 205
Query: 453 MKTFI-GKKPTDEIFNEEM 470
+ G+ P + N E+
Sbjct: 206 TEIVTHGRIPYPGMTNPEV 224
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALAL-EYMHFGYSAPVIHCDIKANNV 393
+I EY +GSL +L + + I +N ++D+A + E M F IH D++A N+
Sbjct: 90 IITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 146
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIML 452
L+ D + ++DFG+A+ ED T + I + APE G + DV+SFGI+L
Sbjct: 147 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 206
Query: 453 MKTFI-GKKPTDEIFNEEM 470
+ G+ P + N E+
Sbjct: 207 TEIVTHGRIPYPGMTNPEV 225
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALAL-EYMHFGYSAPVIHCDIKANNV 393
+I EY +GSL +L + + I +N ++D+A + E M F IH D++A N+
Sbjct: 92 IITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 148
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIML 452
L+ D + ++DFG+A+ ED T + I + APE G + DV+SFGI+L
Sbjct: 149 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 208
Query: 453 MKTFI-GKKPTDEIFNEEM 470
+ G+ P + N E+
Sbjct: 209 TEIVTHGRIPYPGMTNPEV 227
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
A++ ++ SL +L+ ++ + ++ A ++Y+H + +IH D+K+NN+
Sbjct: 107 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNI 163
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQT--QTLATIGYMAPEYGR---EGRVSANGDVYSF 448
L +++ + DFG+A S + Q +I +MAPE R + S DVY+F
Sbjct: 164 FLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 223
Query: 449 GIMLMKTFIGKKPTDEIFNEEMTL 472
GI+L + G+ P I N + +
Sbjct: 224 GIVLYELMTGQLPYSNINNRDQII 247
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
A++ ++ SL +L+ ++ + ++ A ++Y+H + +IH D+K+NN+
Sbjct: 106 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNI 162
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQT--QTLATIGYMAPEYGR---EGRVSANGDVYSF 448
L +++ + DFG+A S + Q +I +MAPE R + S DVY+F
Sbjct: 163 FLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 222
Query: 449 GIMLMKTFIGKKPTDEIFNEEMTL 472
GI+L + G+ P I N + +
Sbjct: 223 GIVLYELMTGQLPYSNINNRDQII 246
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
++ E +GSL+ +L + + Q + + +A ++Y+ +H D+ A N+L
Sbjct: 123 IVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGAVHRDLAARNIL 179
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLA---TIGYMAPEYGREGRVSANGDVYSFGIM 451
++ N+V +SDFG+++ ED T I + +PE + ++ DV+S+GI+
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 452 LMKTF-IGKKPTDEIFNEEM 470
L + G++P E+ N+++
Sbjct: 240 LWEVMSYGERPYWEMSNQDV 259
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 73/144 (50%), Gaps = 8/144 (5%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
A++ ++ SL +L+ ++ + ++ A ++Y+H + +IH D+K+NN+
Sbjct: 99 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNI 155
Query: 394 LLDDNMVAHLSDFGIA--KTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSF 448
L +++ + DFG+A K+ S Q +I +MAPE R + S DVY+F
Sbjct: 156 FLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 215
Query: 449 GIMLMKTFIGKKPTDEIFNEEMTL 472
GI+L + G+ P I N + +
Sbjct: 216 GIVLYELMTGQLPYSNINNRDQII 239
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
A++ ++ SL +L++ ++ + ++ A ++Y+H + +IH D+K+NN+
Sbjct: 83 AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNI 139
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQT--QTLATIGYMAPEYGR---EGRVSANGDVYSF 448
L ++ + DFG+A S + Q +I +MAPE R S DVY+F
Sbjct: 140 FLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAF 199
Query: 449 GIMLMKTFIGKKPTDEIFNEEMTLK 473
GI+L + G+ P I N + ++
Sbjct: 200 GIVLYELMTGQLPYSNINNRDQIIE 224
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+I EY +GSL+ +L + + Q + + + ++Y+ +H D+ A N+L
Sbjct: 86 IITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNIL 142
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLA---TIGYMAPEYGREGRVSANGDVYSFGIM 451
++ N+V +SDFG+++ ED T I + APE + ++ DV+S+GI+
Sbjct: 143 VNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV 202
Query: 452 LMKTF-IGKKPTDEIFNEEM 470
+ + G++P ++ N+++
Sbjct: 203 MWEVMSYGERPYWDMSNQDV 222
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
LI+EY P+GSL YL +D + L + +EY+ + IH D+ N+
Sbjct: 88 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNI 144
Query: 394 LLDDNMVAHLSDFGIAKT-GEDQSMTQTQT--LATIGYMAPEYGREGRVSANGDVYSFGI 450
L+++ + DFG+ K +D+ + + + I + APE E + S DV+SFG+
Sbjct: 145 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGV 204
Query: 451 MLMKTF 456
+L + F
Sbjct: 205 VLYELF 210
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALAL-EYMHFGYSAPVIHCDIKANNV 393
+I EY +GSL +L + + I +N ++D+A + E M F IH D++A N+
Sbjct: 94 IITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 150
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIML 452
L+ D + ++DFG+A+ ED T + I + APE G + DV+SFGI+L
Sbjct: 151 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 210
Query: 453 MKTFI-GKKPTDEIFNEEM 470
+ G+ P + N E+
Sbjct: 211 TEIVTHGRIPYPGMTNPEV 229
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 73/144 (50%), Gaps = 8/144 (5%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
A++ ++ SL +L+ ++ + ++ A ++Y+H + +IH D+K+NN+
Sbjct: 107 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNI 163
Query: 394 LLDDNMVAHLSDFGIA--KTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSF 448
L +++ + DFG+A K+ S Q +I +MAPE R + S DVY+F
Sbjct: 164 FLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 223
Query: 449 GIMLMKTFIGKKPTDEIFNEEMTL 472
GI+L + G+ P I N + +
Sbjct: 224 GIVLYELMTGQLPYSNINNRDQII 247
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+I EY +GSL+ +L + + Q + + + ++Y+ +H D+ A N+L
Sbjct: 92 IITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNIL 148
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLA---TIGYMAPEYGREGRVSANGDVYSFGIM 451
++ N+V +SDFG+++ ED T I + APE + ++ DV+S+GI+
Sbjct: 149 VNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV 208
Query: 452 LMKTF-IGKKPTDEIFNEEM 470
+ + G++P ++ N+++
Sbjct: 209 MWEVMSYGERPYWDMSNQDV 228
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
LI+EY P+GSL YL +D + L + +EY+ + IH D+ N+
Sbjct: 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNI 145
Query: 394 LLDDNMVAHLSDFGIAKT-GEDQSMTQTQT--LATIGYMAPEYGREGRVSANGDVYSFGI 450
L+++ + DFG+ K +D+ + + + I + APE E + S DV+SFG+
Sbjct: 146 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGV 205
Query: 451 MLMKTF 456
+L + F
Sbjct: 206 VLYELF 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
LI+EY P+GSL YL +D + L + +EY+ + IH D+ N+
Sbjct: 87 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNI 143
Query: 394 LLDDNMVAHLSDFGIAKT-GEDQSMTQTQT--LATIGYMAPEYGREGRVSANGDVYSFGI 450
L+++ + DFG+ K +D+ + + + I + APE E + S DV+SFG+
Sbjct: 144 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGV 203
Query: 451 MLMKTF 456
+L + F
Sbjct: 204 VLYELF 209
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
LI+EY P+GSL YL +D + L + +EY+ + IH D+ N+
Sbjct: 107 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNI 163
Query: 394 LLDDNMVAHLSDFGIAKT-GEDQSMTQTQT--LATIGYMAPEYGREGRVSANGDVYSFGI 450
L+++ + DFG+ K +D+ + + + I + APE E + S DV+SFG+
Sbjct: 164 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGV 223
Query: 451 MLMKTF 456
+L + F
Sbjct: 224 VLYELF 229
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
LI+EY P+GSL YL +D + L + +EY+ + IH D+ N+
Sbjct: 93 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNI 149
Query: 394 LLDDNMVAHLSDFGIAKT-GEDQSMTQTQT--LATIGYMAPEYGREGRVSANGDVYSFGI 450
L+++ + DFG+ K +D+ + + + I + APE E + S DV+SFG+
Sbjct: 150 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGV 209
Query: 451 MLMKTF 456
+L + F
Sbjct: 210 VLYELF 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
LI+EY P+GSL YL +D + L + +EY+ + IH D+ N+
Sbjct: 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNI 145
Query: 394 LLDDNMVAHLSDFGIAKT-GEDQSMTQTQT--LATIGYMAPEYGREGRVSANGDVYSFGI 450
L+++ + DFG+ K +D+ + + + I + APE E + S DV+SFG+
Sbjct: 146 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGV 205
Query: 451 MLMKTF 456
+L + F
Sbjct: 206 VLYELF 211
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 6/125 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI+EY P+GSL YL +D + L + +EY+ + IH D+ N+L
Sbjct: 95 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNIL 151
Query: 395 LDDNMVAHLSDFGIAKT-GEDQSMTQTQT--LATIGYMAPEYGREGRVSANGDVYSFGIM 451
+++ + DFG+ K +D+ + + + I + APE E + S DV+SFG++
Sbjct: 152 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 211
Query: 452 LMKTF 456
L + F
Sbjct: 212 LYELF 216
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
LI+EY P+GSL YL +D + L + +EY+ + IH D+ N+
Sbjct: 92 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNI 148
Query: 394 LLDDNMVAHLSDFGIAKT-GEDQSMTQTQT--LATIGYMAPEYGREGRVSANGDVYSFGI 450
L+++ + DFG+ K +D+ + + + I + APE E + S DV+SFG+
Sbjct: 149 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGV 208
Query: 451 MLMKTF 456
+L + F
Sbjct: 209 VLYELF 214
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
A++ ++ SL +L++ ++ + ++ A ++Y+H + +IH D+K+NN+
Sbjct: 95 AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNI 151
Query: 394 LLDDNMVAHLSDFGIA--KTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSF 448
L ++ + DFG+A K+ S Q +I +MAPE R S DVY+F
Sbjct: 152 FLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAF 211
Query: 449 GIMLMKTFIGKKPTDEIFNEEMTLK 473
GI+L + G+ P I N + ++
Sbjct: 212 GIVLYELMTGQLPYSNINNRDQIIE 236
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 6/125 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI+EY P+GSL YL +D + L + +EY+ + IH D+ N+L
Sbjct: 96 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNIL 152
Query: 395 LDDNMVAHLSDFGIAKT-GEDQSMTQTQT--LATIGYMAPEYGREGRVSANGDVYSFGIM 451
+++ + DFG+ K +D+ + + + I + APE E + S DV+SFG++
Sbjct: 153 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 212
Query: 452 LMKTF 456
L + F
Sbjct: 213 LYELF 217
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 15/117 (12%)
Query: 357 DIFQRLNSMI------------DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLS 404
D+F RL+ + ++ALAL+++H S +I+ D+K N+LLD+ L+
Sbjct: 112 DLFTRLSKEVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLT 168
Query: 405 DFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
DFG++K D T+ YMAPE + + D +SFG+++ + G P
Sbjct: 169 DFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
LI+EY P+GSL YL +D + L + +EY+ + IH D+ N+
Sbjct: 107 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNI 163
Query: 394 LLDDNMVAHLSDFGIAKT-GEDQSMTQTQT--LATIGYMAPEYGREGRVSANGDVYSFGI 450
L+++ + DFG+ K +D+ + + + I + APE E + S DV+SFG+
Sbjct: 164 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGV 223
Query: 451 MLMKTF 456
+L + F
Sbjct: 224 VLYELF 229
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 6/125 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI+EY P+GSL YL + +D + L + +EY+ + IH D+ N+L
Sbjct: 93 LIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNIL 149
Query: 395 LDDNMVAHLSDFGIAKT-GEDQSMTQTQT--LATIGYMAPEYGREGRVSANGDVYSFGIM 451
+++ + DFG+ K +D+ + + + I + APE E + S DV+SFG++
Sbjct: 150 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 209
Query: 452 LMKTF 456
L + F
Sbjct: 210 LYELF 214
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 15/117 (12%)
Query: 357 DIFQRLNSMI------------DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLS 404
D+F RL+ + ++ALAL+++H S +I+ D+K N+LLD+ L+
Sbjct: 113 DLFTRLSKEVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLT 169
Query: 405 DFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
DFG++K D T+ YMAPE + + D +SFG+++ + G P
Sbjct: 170 DFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 6/125 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI+EY P+GSL YL +D + L + +EY+ + IH D+ N+L
Sbjct: 121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNIL 177
Query: 395 LDDNMVAHLSDFGIAKT-GEDQSMTQTQT--LATIGYMAPEYGREGRVSANGDVYSFGIM 451
+++ + DFG+ K +D+ + + + I + APE E + S DV+SFG++
Sbjct: 178 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 237
Query: 452 LMKTF 456
L + F
Sbjct: 238 LYELF 242
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
A++ ++ SL +L++ ++ + ++ A ++Y+H + +IH D+K+NN+
Sbjct: 95 AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNI 151
Query: 394 LLDDNMVAHLSDFGIA--KTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSF 448
L ++ + DFG+A K+ S Q +I +MAPE R S DVY+F
Sbjct: 152 FLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAF 211
Query: 449 GIMLMKTFIGKKPTDEIFNEEMTLK 473
GI+L + G+ P I N + ++
Sbjct: 212 GIVLYELMTGQLPYSNINNRDQIIE 236
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 15/117 (12%)
Query: 357 DIFQRLNSMI------------DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLS 404
D+F RL+ + ++ALAL+++H S +I+ D+K N+LLD+ L+
Sbjct: 112 DLFTRLSKEVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLT 168
Query: 405 DFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
DFG++K D T+ YMAPE + + D +SFG+++ + G P
Sbjct: 169 DFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 6/125 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI+EY P+GSL YL +D + L + +EY+ + IH D+ N+L
Sbjct: 97 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNIL 153
Query: 395 LDDNMVAHLSDFGIAKT-GEDQSMTQTQT--LATIGYMAPEYGREGRVSANGDVYSFGIM 451
+++ + DFG+ K +D+ + + + I + APE E + S DV+SFG++
Sbjct: 154 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 213
Query: 452 LMKTF 456
L + F
Sbjct: 214 LYELF 218
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
LI+EY P+GSL YL +D + L + +EY+ + IH D+ N+
Sbjct: 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNI 145
Query: 394 LLDDNMVAHLSDFGIAKT-GEDQSMTQTQT--LATIGYMAPEYGREGRVSANGDVYSFGI 450
L+++ + DFG+ K +D+ + + + I + APE E + S DV+SFG+
Sbjct: 146 LVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGV 205
Query: 451 MLMKTF 456
+L + F
Sbjct: 206 VLYELF 211
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 13/138 (9%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++E+ P G L L + +L M+D+AL +EYM + P++H D+++ N+
Sbjct: 98 MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIF 156
Query: 395 ---LDDN--MVAHLSDFGIAKTGEDQSM-TQTQTLATIGYMAPEY--GREGRVSANGDVY 446
LD+N + A ++DF +++ QS+ + + L +MAPE E + D Y
Sbjct: 157 LQSLDENAPVCAKVADFSLSQ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTY 212
Query: 447 SFGIMLMKTFIGKKPTDE 464
SF ++L G+ P DE
Sbjct: 213 SFAMILYTILTGEGPFDE 230
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 6/126 (4%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
LI+E+ P+GSL +YL +D + L + +EY+ + IH D+ N+
Sbjct: 92 KLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNI 148
Query: 394 LLDDNMVAHLSDFGIAKT-GEDQSMTQTQT--LATIGYMAPEYGREGRVSANGDVYSFGI 450
L+++ + DFG+ K +D+ + + + I + APE E + S DV+SFG+
Sbjct: 149 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGV 208
Query: 451 MLMKTF 456
+L + F
Sbjct: 209 VLYELF 214
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 91/235 (38%), Gaps = 46/235 (19%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYS--------------GNCSLDIFQRLNSMIDVALAL 372
C+ ++ EY HG L ++L S L + Q L VA +
Sbjct: 112 CTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGM 171
Query: 373 EYM---HFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIG 427
Y+ HF +H D+ N L+ +V + DFG+++ D +T+ I
Sbjct: 172 VYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIME 486
+M PE + + DV+SFG++L + F GK+P W +S E
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP-----------------WYQLSNTE 268
Query: 487 VIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIES 541
ID RE V+ + C P+QR + K++ RL + ++
Sbjct: 269 AIDCITQGRE---LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALAL-EYMHFGYSAPVIHCDIKANNV 393
+I EY +GSL +L + + I +N ++D+A + E M F IH +++A N+
Sbjct: 80 IITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANI 136
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIML 452
L+ D + ++DFG+A+ ED T + I + APE G + DV+SFGI+L
Sbjct: 137 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 196
Query: 453 MKTFI-GKKPTDEIFNEEM 470
+ G+ P + N E+
Sbjct: 197 TEIVTHGRIPYPGMTNPEV 215
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 15/167 (8%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYL---------YSGNCSLDIFQRLNSMIDVA 369
NI + +C+ + +I+EY G+L +YL YS N S + ++L+S V+
Sbjct: 136 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 195
Query: 370 LALEY---MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLA 424
A + M + S IH D+ A NVL+ ++ V ++DFG+A+ D T
Sbjct: 196 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 255
Query: 425 TIGYMAPEYGREGRVSANGDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
+ +MAPE + + DV+SFG++L + F +G P + EE+
Sbjct: 256 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 302
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 19/151 (12%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLY---------------SGNCSLDIFQRLN 363
NI + +C + + L +EY PHG+L +L S +L Q L+
Sbjct: 84 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 143
Query: 364 SMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTL 423
DVA ++Y+ IH ++ A N+L+ +N VA ++DFG+++ G++ + +T
Sbjct: 144 FAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSR-GQEVYVKKTMGR 199
Query: 424 ATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+ +MA E + N DV+S+G++L +
Sbjct: 200 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 230
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 15/167 (8%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYL---------YSGNCSLDIFQRLNSMIDVA 369
NI + +C+ + +I+EY G+L +YL YS N S + ++L+S V+
Sbjct: 84 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 143
Query: 370 LALEY---MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLA 424
A + M + S IH D+ A NVL+ ++ V ++DFG+A+ D T
Sbjct: 144 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 203
Query: 425 TIGYMAPEYGREGRVSANGDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
+ +MAPE + + DV+SFG++L + F +G P + EE+
Sbjct: 204 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 250
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 15/167 (8%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYL---------YSGNCSLDIFQRLNSMIDVA 369
NI + +C+ + +I+EY G+L +YL YS N S + ++L+S V+
Sbjct: 87 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 146
Query: 370 LALEY---MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLA 424
A + M + S IH D+ A NVL+ ++ V ++DFG+A+ D T
Sbjct: 147 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 206
Query: 425 TIGYMAPEYGREGRVSANGDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
+ +MAPE + + DV+SFG++L + F +G P + EE+
Sbjct: 207 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 253
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 15/167 (8%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYL---------YSGNCSLDIFQRLNSMIDVA 369
NI + +C+ + +I+EY G+L +YL YS N S + ++L+S V+
Sbjct: 88 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 147
Query: 370 LALEY---MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLA 424
A + M + S IH D+ A NVL+ ++ V ++DFG+A+ D T
Sbjct: 148 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 207
Query: 425 TIGYMAPEYGREGRVSANGDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
+ +MAPE + + DV+SFG++L + F +G P + EE+
Sbjct: 208 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 254
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 6/121 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI+E+ P GSL++YL +++ Q+L + + ++Y+ S +H D+ A NVL
Sbjct: 90 LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVL 146
Query: 395 LDDNMVAHLSDFGIAK---TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 451
++ + DFG+ K T ++ + + + + APE + + DV+SFG+
Sbjct: 147 VESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVT 206
Query: 452 L 452
L
Sbjct: 207 L 207
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 15/167 (8%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYL---------YSGNCSLDIFQRLNSMIDVA 369
NI + +C+ + +I+EY G+L +YL YS N S + ++L+S V+
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 370 LALEY---MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLA 424
A + M + S IH D+ A NVL+ ++ V ++DFG+A+ D T
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 214
Query: 425 TIGYMAPEYGREGRVSANGDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
+ +MAPE + + DV+SFG++L + F +G P + EE+
Sbjct: 215 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 6/121 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI+E+ P GSL++YL +++ Q+L + + ++Y+ S +H D+ A NVL
Sbjct: 102 LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVL 158
Query: 395 LDDNMVAHLSDFGIAK---TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 451
++ + DFG+ K T ++ + + + + APE + + DV+SFG+
Sbjct: 159 VESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVT 218
Query: 452 L 452
L
Sbjct: 219 L 219
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 91/235 (38%), Gaps = 46/235 (19%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYS--------------GNCSLDIFQRLNSMIDVALAL 372
C+ ++ EY HG L ++L S L + Q L VA +
Sbjct: 83 CTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGM 142
Query: 373 EYM---HFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIG 427
Y+ HF +H D+ N L+ +V + DFG+++ D +T+ I
Sbjct: 143 VYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIME 486
+M PE + + DV+SFG++L + F GK+P W +S E
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP-----------------WYQLSNTE 239
Query: 487 VIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIES 541
ID RE V+ + C P+QR + K++ RL + ++
Sbjct: 240 AIDCITQGRE---LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 291
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 15/167 (8%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYL---------YSGNCSLDIFQRLNSMIDVA 369
NI + +C+ + +I+EY G+L +YL YS N S + ++L+S V+
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 370 LALEY---MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLA 424
A + M + S IH D+ A NVL+ ++ V ++DFG+A+ D T
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 214
Query: 425 TIGYMAPEYGREGRVSANGDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
+ +MAPE + + DV+SFG++L + F +G P + EE+
Sbjct: 215 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 91/235 (38%), Gaps = 46/235 (19%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYS--------------GNCSLDIFQRLNSMIDVALAL 372
C+ ++ EY HG L ++L S L + Q L VA +
Sbjct: 89 CTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGM 148
Query: 373 EYM---HFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIG 427
Y+ HF +H D+ N L+ +V + DFG+++ D +T+ I
Sbjct: 149 VYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIME 486
+M PE + + DV+SFG++L + F GK+P W +S E
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP-----------------WYQLSNTE 245
Query: 487 VIDANLLSREDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIES 541
ID RE V+ + C P+QR + K++ RL + ++
Sbjct: 246 AIDCITQGRE---LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 297
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 8/121 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
L++EY P GSL YL S+ + Q L + + Y+H + IH D+ A NVL
Sbjct: 112 LVMEYVPLGSLRDYL--PRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVL 166
Query: 395 LDDNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 451
LD++ + + DFG+AK G + + + + + APE +E + DV+SFG+
Sbjct: 167 LDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVT 226
Query: 452 L 452
L
Sbjct: 227 L 227
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 31/180 (17%)
Query: 276 HHASWKNALLLRTVLPLRTIFMIVVILLILRCRKRGKRPSNDANISPVATSCSNEEFKAL 335
H + WK + + LRT++ +I C +G E+ L
Sbjct: 59 HRSGWKQEIDI-----LRTLYHEHIIKYKGCCEDQG------------------EKSLQL 95
Query: 336 ILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395
++EY P GSL YL S+ + Q L + + Y+H S IH ++ A NVLL
Sbjct: 96 VMEYVPLGSLRDYL--PRHSIGLAQLLLFAQQICEGMAYLH---SQHYIHRNLAARNVLL 150
Query: 396 DDNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
D++ + + DFG+AK G + + + + + APE +E + DV+SFG+ L
Sbjct: 151 DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTL 210
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 83/167 (49%), Gaps = 15/167 (8%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYL---------YSGNCSLDIFQRLNSMIDVA 369
NI + +C+ + +I+EY G+L +YL +S N S + ++L+S V+
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVS 154
Query: 370 LALEY---MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLA 424
A + M + S IH D+ A NVL+ ++ V ++DFG+A+ D T
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRL 214
Query: 425 TIGYMAPEYGREGRVSANGDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
+ +MAPE + + DV+SFG++L + F +G P + EE+
Sbjct: 215 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 18/130 (13%)
Query: 357 DIFQRLNSMI------------DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLS 404
D+F RL+ + ++AL L+++H S +I+ D+K N+LLD+ L+
Sbjct: 116 DLFTRLSKEVMFTEEDVKFYLAELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLT 172
Query: 405 DFGIAKTGEDQSMTQTQTLATIGYMAPE-YGREGRVSANGDVYSFGIMLMKTFIGKKP-T 462
DFG++K D T+ YMAPE R+G S + D +S+G+++ + G P
Sbjct: 173 DFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGH-SHSADWWSYGVLMFEMLTGSLPFQ 231
Query: 463 DEIFNEEMTL 472
+ E MTL
Sbjct: 232 GKDRKETMTL 241
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 6/125 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
L++EY P G L +L LD + L + +EY+ S +H D+ A N+L
Sbjct: 87 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNIL 143
Query: 395 LDDNMVAHLSDFGIAK---TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 451
++ ++DFG+AK +D + + + I + APE + S DV+SFG++
Sbjct: 144 VESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 203
Query: 452 LMKTF 456
L + F
Sbjct: 204 LYELF 208
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Query: 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSM---IDVALAL 372
N NI + +C N L++EY GSL L+ G L + ++M + + +
Sbjct: 59 NHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLH-GAEPLPYYTAAHAMSWCLQCSQGV 115
Query: 373 EYMHFGYSAPVIHCDIKANNVLL-DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
Y+H +IH D+K N+LL V + DFG T D T + +MAP
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG---TACDIQTHMTNNKGSAAWMAP 172
Query: 432 EYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEI 465
E S DV+S+GI+L + +KP DEI
Sbjct: 173 EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 206
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Query: 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSM---IDVALAL 372
N NI + +C N L++EY GSL L+ G L + ++M + + +
Sbjct: 60 NHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLH-GAEPLPYYTAAHAMSWCLQCSQGV 116
Query: 373 EYMHFGYSAPVIHCDIKANNVLL-DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
Y+H +IH D+K N+LL V + DFG T D T + +MAP
Sbjct: 117 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG---TACDIQTHMTNNKGSAAWMAP 173
Query: 432 EYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEI 465
E S DV+S+GI+L + +KP DEI
Sbjct: 174 EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 207
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 114/263 (43%), Gaps = 50/263 (19%)
Query: 291 PLRTIFMIVVILLILRCRKRGKRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYL- 349
PLR F +L R R + P N+ + + ++ ++I Y HG L ++L
Sbjct: 54 PLREEFRHEAML-----RARLQHP----NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLV 104
Query: 350 ----YSGNCSLDIFQRLNSMID----------VALALEYMHFGYSAPVIHCDIKANNVLL 395
+S S D + + S ++ +A +EY+ S V+H D+ NVL+
Sbjct: 105 MRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLV 161
Query: 396 DDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLM 453
D + +SD G+ + D +L I +MAPE G+ S + D++S+G++L
Sbjct: 162 YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLW 221
Query: 454 KTF-IGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFN 512
+ F G +P N++ ++E+I R + ++V+
Sbjct: 222 EVFSYGLQPYCGYSNQD--------------VVEMI------RNRQVLPCPDDCPAWVYA 261
Query: 513 LAMECTVESPEQRINPKEIVTRL 535
L +EC E P +R K+I +RL
Sbjct: 262 LMIECWNEFPSRRPRFKDIHSRL 284
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
LI+EY P+GSL YL +D + L + +EY+ + IH ++ N+
Sbjct: 90 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRNLATRNI 146
Query: 394 LLDDNMVAHLSDFGIAKT-GEDQSMTQTQT--LATIGYMAPEYGREGRVSANGDVYSFGI 450
L+++ + DFG+ K +D+ + + + I + APE E + S DV+SFG+
Sbjct: 147 LVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGV 206
Query: 451 MLMKTF 456
+L + F
Sbjct: 207 VLYELF 212
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+I+E G L +L SLD+ + ++ AL Y+ S +H DI A NVL
Sbjct: 87 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 143
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQ-TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLM 453
+ N L DFG+++ ED + + ++ I +MAPE R ++ DV+ FG+ +
Sbjct: 144 VSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 203
Query: 454 KTFI-GKKPTDEIFNEEM 470
+ + G KP + N ++
Sbjct: 204 EILMHGVKPFQGVKNNDV 221
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 114/263 (43%), Gaps = 50/263 (19%)
Query: 291 PLRTIFMIVVILLILRCRKRGKRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYL- 349
PLR F +L R R + P N+ + + ++ ++I Y HG L ++L
Sbjct: 71 PLREEFRHEAML-----RARLQHP----NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLV 121
Query: 350 ----YSGNCSLDIFQRLNSMID----------VALALEYMHFGYSAPVIHCDIKANNVLL 395
+S S D + + S ++ +A +EY+ S V+H D+ NVL+
Sbjct: 122 MRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLV 178
Query: 396 DDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLM 453
D + +SD G+ + D +L I +MAPE G+ S + D++S+G++L
Sbjct: 179 YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLW 238
Query: 454 KTF-IGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFVFN 512
+ F G +P N++ ++E+I R + ++V+
Sbjct: 239 EVFSYGLQPYCGYSNQD--------------VVEMI------RNRQVLPCPDDCPAWVYA 278
Query: 513 LAMECTVESPEQRINPKEIVTRL 535
L +EC E P +R K+I +RL
Sbjct: 279 LMIECWNEFPSRRPRFKDIHSRL 301
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 31/180 (17%)
Query: 276 HHASWKNALLLRTVLPLRTIFMIVVILLILRCRKRGKRPSNDANISPVATSCSNEEFKAL 335
H + WK + + LRT++ +I C +G E+ L
Sbjct: 59 HRSGWKQEIDI-----LRTLYHEHIIKYKGCCEDQG------------------EKSLQL 95
Query: 336 ILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL 395
++EY P GSL YL S+ + Q L + + Y+H + IH ++ A NVLL
Sbjct: 96 VMEYVPLGSLRDYL--PRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRNLAARNVLL 150
Query: 396 DDNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
D++ + + DFG+AK G + + + + + APE +E + DV+SFG+ L
Sbjct: 151 DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTL 210
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 77/143 (53%), Gaps = 11/143 (7%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM-HFGYSAPVIHCDIKANNV 393
++ E+ +G+L+ +L + + Q + + +A + Y+ Y +H D+ A N+
Sbjct: 94 ILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSY----VHRDLAARNI 149
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-----TIGYMAPEYGREGRVSANGDVYSF 448
L++ N+V +SDFG+++ E+ S T+T + I + APE + ++ D +S+
Sbjct: 150 LVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSY 209
Query: 449 GIMLMKTF-IGKKPTDEIFNEEM 470
GI++ + G++P ++ N+++
Sbjct: 210 GIVMWEVMSFGERPYWDMSNQDV 232
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 15/167 (8%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYL---------YSGNCSLDIFQRLNSMIDVA 369
NI + +C+ + +I+EY G+L +YL Y N S + ++L+S V+
Sbjct: 80 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVS 139
Query: 370 LALEY---MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLA 424
A + M + S IH D+ A NVL+ ++ V ++DFG+A+ D T
Sbjct: 140 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 199
Query: 425 TIGYMAPEYGREGRVSANGDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
+ +MAPE + + DV+SFG++L + F +G P + EE+
Sbjct: 200 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 246
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 15/167 (8%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYL---------YSGNCSLDIFQRLNSMIDVA 369
NI + +C+ + +I+EY G+L +YL Y N S + ++L+S V+
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVS 154
Query: 370 LALEY---MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLA 424
A + M + S IH D+ A NVL+ ++ V ++DFG+A+ D T
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 214
Query: 425 TIGYMAPEYGREGRVSANGDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
+ +MAPE + + DV+SFG++L + F +G P + EE+
Sbjct: 215 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHC 386
C E + L++E G L KYL N + + + V++ ++Y+ + +H
Sbjct: 81 CEAESW-MLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHR 135
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK---TGEDQSMTQTQTLATIGYMAPEYGREGRVSANG 443
D+ A NVLL A +SDFG++K E+ QT + + APE + S+
Sbjct: 136 DLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKS 195
Query: 444 DVYSFGIMLMKTF-IGKKPTDEIFNEEMT 471
DV+SFG+++ + F G+KP + E+T
Sbjct: 196 DVWSFGVLMWEAFSYGQKPYRGMKGSEVT 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 335 LILEYKPHGSLEKYL--YSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392
L +EY G L KYL + C L + D++ AL Y+H +IH D+K N
Sbjct: 95 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPEN 151
Query: 393 VLLD---DNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFG 449
++L ++ + D G AK DQ T+ + T+ Y+APE + + + D +SFG
Sbjct: 152 IVLQPGPQRLIHKIIDLGYAKEL-DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFG 210
Query: 450 IMLMKTFIGKKP 461
+ + G +P
Sbjct: 211 TLAFECITGFRP 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 335 LILEYKPHGSLEKYL--YSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392
L +EY G L KYL + C L + D++ AL Y+H +IH D+K N
Sbjct: 96 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPEN 152
Query: 393 VLLD---DNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFG 449
++L ++ + D G AK DQ T+ + T+ Y+APE + + + D +SFG
Sbjct: 153 IVLQPGPQRLIHKIIDLGYAKEL-DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFG 211
Query: 450 IMLMKTFIGKKP 461
+ + G +P
Sbjct: 212 TLAFECITGFRP 223
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHC 386
C E + L++E G L KYL N + + + V++ ++Y+ + +H
Sbjct: 77 CEAESW-MLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHR 131
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK---TGEDQSMTQTQTLATIGYMAPEYGREGRVSANG 443
D+ A NVLL A +SDFG++K E+ QT + + APE + S+
Sbjct: 132 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS 191
Query: 444 DVYSFGIMLMKTF-IGKKPTDEIFNEEMT 471
DV+SFG+++ + F G+KP + E+T
Sbjct: 192 DVWSFGVLMWEAFSYGQKPYRGMKGSEVT 220
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Query: 337 LEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396
L Y +G L KY+ + R + ++ ALEY+H +IH D+K N+LL+
Sbjct: 111 LSYAKNGCLLKYIRKIGSFDETCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLN 166
Query: 397 DNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
++M ++DFG AK + E + + T Y++PE E S + D+++ G ++ +
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQ 226
Query: 455 TFIGKKP 461
G P
Sbjct: 227 LVAGLPP 233
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHC 386
C E + L++E G L KYL N + + + V++ ++Y+ + +H
Sbjct: 81 CEAESW-MLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHR 135
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK---TGEDQSMTQTQTLATIGYMAPEYGREGRVSANG 443
D+ A NVLL A +SDFG++K E+ QT + + APE + S+
Sbjct: 136 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS 195
Query: 444 DVYSFGIMLMKTF-IGKKPTDEIFNEEMT 471
DV+SFG+++ + F G+KP + E+T
Sbjct: 196 DVWSFGVLMWEAFSYGQKPYRGMKGSEVT 224
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHC 386
C E + L++E G L KYL N + + + V++ ++Y+ + +H
Sbjct: 87 CEAESW-MLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHR 141
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK---TGEDQSMTQTQTLATIGYMAPEYGREGRVSANG 443
D+ A NVLL A +SDFG++K E+ QT + + APE + S+
Sbjct: 142 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS 201
Query: 444 DVYSFGIMLMKTF-IGKKPTDEIFNEEMT 471
DV+SFG+++ + F G+KP + E+T
Sbjct: 202 DVWSFGVLMWEAFSYGQKPYRGMKGSEVT 230
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCSLD--IFQRLNSMIDVALALEYMHFGYSAPVI 384
C E + L++E G L KYL D I + ++ V++ ++Y+ + +
Sbjct: 75 CEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ---VSMGMKYLE---ESNFV 127
Query: 385 HCDIKANNVLLDDNMVAHLSDFGIAK---TGEDQSMTQTQTLATIGYMAPEYGREGRVSA 441
H D+ A NVLL A +SDFG++K E+ QT + + APE + S+
Sbjct: 128 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 187
Query: 442 NGDVYSFGIMLMKTF-IGKKPTDEIFNEEMT 471
DV+SFG+++ + F G+KP + E+T
Sbjct: 188 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 218
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHC 386
C E + L++E G L KYL N + + + V++ ++Y+ + +H
Sbjct: 95 CEAESW-MLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHR 149
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK---TGEDQSMTQTQTLATIGYMAPEYGREGRVSANG 443
D+ A NVLL A +SDFG++K E+ QT + + APE + S+
Sbjct: 150 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS 209
Query: 444 DVYSFGIMLMKTF-IGKKPTDEIFNEEMT 471
DV+SFG+++ + F G+KP + E+T
Sbjct: 210 DVWSFGVLMWEAFSYGQKPYRGMKGSEVT 238
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+I+E G L +L SLD+ + ++ AL Y+ S +H DI A NVL
Sbjct: 87 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 143
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQ-TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLM 453
+ N L DFG+++ ED + + ++ I +MAPE R ++ DV+ FG+ +
Sbjct: 144 VSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 203
Query: 454 KTFI-GKKPTDEIFNEEM 470
+ + G KP + N ++
Sbjct: 204 EILMHGVKPFQGVKNNDV 221
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+I+E G L +L SLD+ + ++ AL Y+ S +H DI A NVL
Sbjct: 87 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 143
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQ-TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLM 453
+ N L DFG+++ ED + + ++ I +MAPE R ++ DV+ FG+ +
Sbjct: 144 VSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 203
Query: 454 KTFI-GKKPTDEIFNEEM 470
+ + G KP + N ++
Sbjct: 204 EILMHGVKPFQGVKNNDV 221
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCSLD--IFQRLNSMIDVALALEYMHFGYSAPVI 384
C E + L++E G L KYL D I + ++ V++ ++Y+ + +
Sbjct: 97 CEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ---VSMGMKYLE---ESNFV 149
Query: 385 HCDIKANNVLLDDNMVAHLSDFGIAK---TGEDQSMTQTQTLATIGYMAPEYGREGRVSA 441
H D+ A NVLL A +SDFG++K E+ QT + + APE + S+
Sbjct: 150 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 209
Query: 442 NGDVYSFGIMLMKTF-IGKKPTDEIFNEEMT 471
DV+SFG+++ + F G+KP + E+T
Sbjct: 210 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 240
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCSLD--IFQRLNSMIDVALALEYMHFGYSAPVI 384
C E + L++E G L KYL D I + ++ V++ ++Y+ + +
Sbjct: 97 CEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ---VSMGMKYLE---ESNFV 149
Query: 385 HCDIKANNVLLDDNMVAHLSDFGIAK---TGEDQSMTQTQTLATIGYMAPEYGREGRVSA 441
H D+ A NVLL A +SDFG++K E+ QT + + APE + S+
Sbjct: 150 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 209
Query: 442 NGDVYSFGIMLMKTF-IGKKPTDEIFNEEMT 471
DV+SFG+++ + F G+KP + E+T
Sbjct: 210 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 240
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHC 386
C E + L++E G L KYL N + + + V++ ++Y+ + +H
Sbjct: 439 CEAESW-MLVMEMAELGPLNKYLQQ-NRHVKDKNIIELVHQVSMGMKYLE---ESNFVHR 493
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK---TGEDQSMTQTQTLATIGYMAPEYGREGRVSANG 443
D+ A NVLL A +SDFG++K E+ QT + + APE + S+
Sbjct: 494 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS 553
Query: 444 DVYSFGIMLMKTF-IGKKPTDEIFNEEMT 471
DV+SFG+++ + F G+KP + E+T
Sbjct: 554 DVWSFGVLMWEAFSYGQKPYRGMKGSEVT 582
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+I+E G L +L SLD+ + ++ AL Y+ S +H DI A NVL
Sbjct: 92 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 148
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQ-TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLM 453
+ N L DFG+++ ED + + ++ I +MAPE R ++ DV+ FG+ +
Sbjct: 149 VSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 208
Query: 454 KTFI-GKKPTDEIFNEEM 470
+ + G KP + N ++
Sbjct: 209 EILMHGVKPFQGVKNNDV 226
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 6/125 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
L++EY P G L +L LD + L + +EY+ S +H D+ A N+L
Sbjct: 91 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNIL 147
Query: 395 LDDNMVAHLSDFGIAK---TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 451
++ ++DFG+AK +D + + + I + APE + S DV+SFG++
Sbjct: 148 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 207
Query: 452 LMKTF 456
L + F
Sbjct: 208 LYELF 212
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 6/125 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
L++EY P G L +L LD + L + +EY+ S +H D+ A N+L
Sbjct: 90 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNIL 146
Query: 395 LDDNMVAHLSDFGIAK---TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 451
++ ++DFG+AK +D + + + I + APE + S DV+SFG++
Sbjct: 147 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 206
Query: 452 LMKTF 456
L + F
Sbjct: 207 LYELF 211
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHC 386
C E + L++E G L KYL N + + + V++ ++Y+ + +H
Sbjct: 440 CEAESW-MLVMEMAELGPLNKYLQQ-NRHVKDKNIIELVHQVSMGMKYLE---ESNFVHR 494
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK---TGEDQSMTQTQTLATIGYMAPEYGREGRVSANG 443
D+ A NVLL A +SDFG++K E+ QT + + APE + S+
Sbjct: 495 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS 554
Query: 444 DVYSFGIMLMKTF-IGKKPTDEIFNEEMT 471
DV+SFG+++ + F G+KP + E+T
Sbjct: 555 DVWSFGVLMWEAFSYGQKPYRGMKGSEVT 583
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+I+E G L +L SLD+ + ++ AL Y+ S +H DI A NVL
Sbjct: 115 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 171
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQ-TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLM 453
+ N L DFG+++ ED + + ++ I +MAPE R ++ DV+ FG+ +
Sbjct: 172 VSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 231
Query: 454 KTFI-GKKPTDEIFNEEM 470
+ + G KP + N ++
Sbjct: 232 EILMHGVKPFQGVKNNDV 249
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
++ L+Y+H S IH DIKA NVLL + L+DFG+A D + + + T
Sbjct: 124 EILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTP 180
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEI 465
+MAPE ++ D++S GI ++ G+ P ++
Sbjct: 181 FWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDL 219
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+I+E G L +L SLD+ + ++ AL Y+ S +H DI A NVL
Sbjct: 84 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 140
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQ-TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLM 453
+ N L DFG+++ ED + + ++ I +MAPE R ++ DV+ FG+ +
Sbjct: 141 VSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 200
Query: 454 KTFI-GKKPTDEIFNEEM 470
+ + G KP + N ++
Sbjct: 201 EILMHGVKPFQGVKNNDV 218
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALAL-EYMHFGYSAPVIHCDIKANNV 393
+I E+ GSL +L S S Q L +ID + + E M F IH D++A N+
Sbjct: 253 IITEFMAKGSLLDFLKSDEGSK---QPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANI 309
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLM 453
L+ ++V ++DFG+A+ G I + APE G + DV+SFGI+LM
Sbjct: 310 LVSASLVCKIADFGLARVG---------AKFPIKWTAPEAINFGSFTIKSDVWSFGILLM 360
Query: 454 KTFI-GKKPTDEIFNEEM 470
+ G+ P + N E+
Sbjct: 361 EIVTYGRIPYPGMSNPEV 378
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 25/178 (14%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
+V LALEY+H S +I+ D+K N+LLD N ++DFG AK D + T
Sbjct: 114 EVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYX---LCGTP 167
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP---------TDEIFNEEMTLKHWVN 477
Y+APE + + D +SFGI++ + G P ++I N E+ + N
Sbjct: 168 DYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFN 227
Query: 478 DWLPISIMEVIDANLLSR--------EDI--HFVAKEQFMSFVFNLAMECTVESPEQR 525
+ + + +I +L R ED+ H KE + + +E E P Q+
Sbjct: 228 EDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQQ 285
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 6/125 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
L++EY P G L +L LD + L + +EY+ S +H D+ A N+L
Sbjct: 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNIL 159
Query: 395 LDDNMVAHLSDFGIAK---TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 451
++ ++DFG+AK +D + + + I + APE + S DV+SFG++
Sbjct: 160 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 219
Query: 452 LMKTF 456
L + F
Sbjct: 220 LYELF 224
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+I+E G L +L SLD+ + ++ AL Y+ S +H DI A NVL
Sbjct: 89 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 145
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQ-TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLM 453
+ N L DFG+++ ED + + ++ I +MAPE R ++ DV+ FG+ +
Sbjct: 146 VSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 205
Query: 454 KTFI-GKKPTDEIFNEEM 470
+ + G KP + N ++
Sbjct: 206 EILMHGVKPFQGVKNNDV 223
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+I+E G L +L SLD+ + ++ AL Y+ S +H DI A NVL
Sbjct: 90 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 146
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQ-TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLM 453
+ N L DFG+++ ED + + ++ I +MAPE R ++ DV+ FG+ +
Sbjct: 147 VSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 206
Query: 454 KTFI-GKKPTDEIFNEEM 470
+ + G KP + N ++
Sbjct: 207 EILMHGVKPFQGVKNNDV 224
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 105/272 (38%), Gaps = 35/272 (12%)
Query: 4 PEIGNLHNLEYLGF----GHNKLVGVVPATIFNLSTLKHLELYXXXXXXXXXXTIPRFIF 59
P +L NL YL F G N LVG +P I L+ L +L + IP F+
Sbjct: 67 PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYI----THTNVSGAIPDFLS 122
Query: 60 NSSKLSILSLAKNSFSSFIPNTFGNLRNLNELALHNNYXXXXXXXXXXXXXXXXXXXXXH 119
L L + N+ S +P + +L NL + N
Sbjct: 123 QIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN----RISGAIPDSYGSFSKLFTS 178
Query: 120 IGLSNNPLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLV 179
+ +S N L G + T+ NL ++ ++DLS N L G + G+ K
Sbjct: 179 MTISRNRLTGKIPPTF-ANL-------------NLAFVDLSRNMLEGDASVLFGSDKNTQ 224
Query: 180 GVDFSMNNFS-GYNKLQGSIPESFGDXXXXXXXXXXXXXXXGAIPISLEKLSYLDDLDLS 238
+ + N+ + K+ G G +P L +L +L L++S
Sbjct: 225 KIHLAKNSLAFDLGKV--------GLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVS 276
Query: 239 FNKLEGEILRGGSFGNFLVELFEGNKLLYGSP 270
FN L GEI +GG+ F V + NK L GSP
Sbjct: 277 FNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP 308
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 75/200 (37%), Gaps = 21/200 (10%)
Query: 2 IPPEIGNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYXXXXXXXXXXTIPRFIFNS 61
IPP I L L YL H + G +P + + TL L+ T+P I +
Sbjct: 93 IPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDF----SYNALSGTLPPSISSL 148
Query: 62 SKLSILSLAKNSFSSFIPNTFGNLRNL-NELALHNNYXXXXXXXXXXXXXXXXXXXXXHI 120
L ++ N S IP+++G+ L + + N +
Sbjct: 149 PNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRN------RLTGKIPPTFANLNLAFV 202
Query: 121 GLSNNPLDGI----------LHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPL 170
LS N L+G + ++ S + + + ++ LDL +N + G LP
Sbjct: 203 DLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQ 262
Query: 171 EIGNLKGLVGVDFSMNNFSG 190
+ LK L ++ S NN G
Sbjct: 263 GLTQLKFLHSLNVSFNNLCG 282
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 58/141 (41%), Gaps = 9/141 (6%)
Query: 126 PLDGILHRTYMGNLSHSLEFFVMSYCNDILYLDLSSNFLTGPLPLEIGNLKGLVGVDFSM 185
P +RT++G L + +Y + LDLS L P P+ +L L ++F
Sbjct: 29 PTTDCCNRTWLGVLCDT---DTQTY--RVNNLDLSGLNLPKPYPIP-SSLANLPYLNFLY 82
Query: 186 NNFSGYNKLQGSIPESFGDXXXXXXXXXXXXXXXGAIPISLEKLSYLDDLDLSFNKLEGE 245
G N L G IP + GAIP L ++ L LD S+N L G
Sbjct: 83 --IGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGT 140
Query: 246 ILRG-GSFGNFLVELFEGNKL 265
+ S N + F+GN++
Sbjct: 141 LPPSISSLPNLVGITFDGNRI 161
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 5/135 (3%)
Query: 329 NEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDI 388
EE +I+E P+G L YL SL + + + + A+ Y+ S +H DI
Sbjct: 79 EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDI 135
Query: 389 KANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQ-TLATIGYMAPEYGREGRVSANGDVYS 447
N+L+ L DFG+++ ED+ + T I +M+PE R + DV+
Sbjct: 136 AVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWM 195
Query: 448 FGIMLMKTF-IGKKP 461
F + + + GK+P
Sbjct: 196 FAVCMWEILSFGKQP 210
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 75/142 (52%), Gaps = 9/142 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
++ E+ +G+L+ +L + + Q + + +A + Y+ +H D+ A N+L
Sbjct: 92 ILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA---EMSYVHRDLAARNIL 148
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-----TIGYMAPEYGREGRVSANGDVYSFG 449
++ N+V +SDFG+++ E+ S T T + I + APE + ++ D +S+G
Sbjct: 149 VNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYG 208
Query: 450 IMLMKTF-IGKKPTDEIFNEEM 470
I++ + G++P ++ N+++
Sbjct: 209 IVMWEVMSFGERPYWDMSNQDV 230
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 6/137 (4%)
Query: 328 SNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALAL-EYMHFGYSAPVIHC 386
+ EE +I EY GSL +L S + +L ID + + E M + IH
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKL---IDFSAQIAEGMAYIERKNYIHR 134
Query: 387 DIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDV 445
D++A NVL+ ++++ ++DFG+A+ ED T + I + APE G + DV
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDV 194
Query: 446 YSFGIMLMKTFI-GKKP 461
+SFGI+L + GK P
Sbjct: 195 WSFGILLYEIVTYGKIP 211
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 5/135 (3%)
Query: 329 NEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDI 388
EE +I+E P+G L YL SL + + + + A+ Y+ S +H DI
Sbjct: 95 EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDI 151
Query: 389 KANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQ-TLATIGYMAPEYGREGRVSANGDVYS 447
N+L+ L DFG+++ ED+ + T I +M+PE R + DV+
Sbjct: 152 AVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWM 211
Query: 448 FGIMLMKTF-IGKKP 461
F + + + GK+P
Sbjct: 212 FAVCMWEILSFGKQP 226
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGN-----CSLDI---------FQRLNS 364
NI + +C+ + +I+EY G+L +YL + S DI F+ L S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVS 161
Query: 365 MI-DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQ 421
+A +EY+ S IH D+ A NVL+ +N V ++DFG+A+ D T
Sbjct: 162 CTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 422 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
+ +MAPE + + DV+SFG+++ + F +G P I EE+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 5/135 (3%)
Query: 329 NEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDI 388
EE +I+E P+G L YL SL + + + + A+ Y+ S +H DI
Sbjct: 83 EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDI 139
Query: 389 KANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQ-TLATIGYMAPEYGREGRVSANGDVYS 447
N+L+ L DFG+++ ED+ + T I +M+PE R + DV+
Sbjct: 140 AVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWM 199
Query: 448 FGIMLMKTF-IGKKP 461
F + + + GK+P
Sbjct: 200 FAVCMWEILSFGKQP 214
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 337 LEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396
L Y +G L KY+ + R + ++ ALEY+H +IH D+K N+LL+
Sbjct: 86 LSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLN 141
Query: 397 DNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
++M ++DFG AK + E + + T Y++PE E + D+++ G ++ +
Sbjct: 142 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 201
Query: 455 TFIGKKP 461
G P
Sbjct: 202 LVAGLPP 208
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 337 LEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396
L Y +G L KY+ + R + ++ ALEY+H +IH D+K N+LL+
Sbjct: 89 LSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLN 144
Query: 397 DNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
++M ++DFG AK + E + + T Y++PE E + D+++ G ++ +
Sbjct: 145 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 204
Query: 455 TFIGKKP 461
G P
Sbjct: 205 LVAGLPP 211
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 337 LEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396
L Y +G L KY+ + R + ++ ALEY+H +IH D+K N+LL+
Sbjct: 87 LSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLN 142
Query: 397 DNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
++M ++DFG AK + E + + T Y++PE E + D+++ G ++ +
Sbjct: 143 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 202
Query: 455 TFIGKKP 461
G P
Sbjct: 203 LVAGLPP 209
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+I+E G L +L SLD+ + ++ AL Y+ S +H DI A NVL
Sbjct: 467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 523
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQ-TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLM 453
+ N L DFG+++ ED + + ++ I +MAPE R ++ DV+ FG+ +
Sbjct: 524 VSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 583
Query: 454 KTFI-GKKPTDEIFNEEM 470
+ + G KP + N ++
Sbjct: 584 EILMHGVKPFQGVKNNDV 601
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNC-----SLDI---------FQRLNS 364
NI + +C+ + +I+EY G+L +YL + S DI F+ L S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 365 MI-DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQ 421
+A +EY+ S IH D+ A NVL+ +N V ++DFG+A+ D T
Sbjct: 162 CTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 422 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
+ +MAPE + + DV+SFG+++ + F +G P I EE+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 337 LEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396
L Y +G L KY+ + R + ++ ALEY+H +IH D+K N+LL+
Sbjct: 93 LSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLN 148
Query: 397 DNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
++M ++DFG AK + E + + T Y++PE E + D+++ G ++ +
Sbjct: 149 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 208
Query: 455 TFIGKKP 461
G P
Sbjct: 209 LVAGLPP 215
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 337 LEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396
L Y +G L KY+ + R + ++ ALEY+H +IH D+K N+LL+
Sbjct: 108 LSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLN 163
Query: 397 DNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
++M ++DFG AK + E + + T Y++PE E + D+++ G ++ +
Sbjct: 164 EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 223
Query: 455 TFIGKKP 461
G P
Sbjct: 224 LVAGLPP 230
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 10/139 (7%)
Query: 319 NISPVATSCSNEEFKA--LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH 376
+I C ++ K+ L++EY P GSL YL +C + + Q L + + Y+H
Sbjct: 71 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHC-VGLAQLLLFAQQICEGMAYLH 128
Query: 377 FGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPEY 433
+ IH + A NVLLD++ + + DFG+AK G + + + + + APE
Sbjct: 129 ---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 185
Query: 434 GREGRVSANGDVYSFGIML 452
+E + DV+SFG+ L
Sbjct: 186 LKECKFYYASDVWSFGVTL 204
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 337 LEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396
L Y +G L KY+ + R + ++ ALEY+H +IH D+K N+LL+
Sbjct: 88 LSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLN 143
Query: 397 DNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
++M ++DFG AK + E + + T Y++PE E + D+++ G ++ +
Sbjct: 144 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 203
Query: 455 TFIGKKP 461
G P
Sbjct: 204 LVAGLPP 210
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 10/139 (7%)
Query: 319 NISPVATSCSNEEFKA--LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH 376
+I C ++ K+ L++EY P GSL YL +C + + Q L + + Y+H
Sbjct: 72 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHC-VGLAQLLLFAQQICEGMAYLH 129
Query: 377 FGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPEY 433
+ IH + A NVLLD++ + + DFG+AK G + + + + + APE
Sbjct: 130 ---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 186
Query: 434 GREGRVSANGDVYSFGIML 452
+E + DV+SFG+ L
Sbjct: 187 LKECKFYYASDVWSFGVTL 205
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 337 LEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396
L Y +G L KY+ + R + ++ ALEY+H +IH D+K N+LL+
Sbjct: 108 LSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLN 163
Query: 397 DNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
++M ++DFG AK + E + + T Y++PE E + D+++ G ++ +
Sbjct: 164 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 223
Query: 455 TFIGKKP 461
G P
Sbjct: 224 LVAGLPP 230
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 337 LEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396
L Y +G L KY+ + R + ++ ALEY+H +IH D+K N+LL+
Sbjct: 109 LSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLN 164
Query: 397 DNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
++M ++DFG AK + E + + T Y++PE E + D+++ G ++ +
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 224
Query: 455 TFIGKKP 461
G P
Sbjct: 225 LVAGLPP 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 337 LEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396
L Y +G L KY+ + R + ++ ALEY+H +IH D+K N+LL+
Sbjct: 109 LSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLN 164
Query: 397 DNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
++M ++DFG AK + E + + T Y++PE E + D+++ G ++ +
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 224
Query: 455 TFIGKKP 461
G P
Sbjct: 225 LVAGLPP 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 337 LEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396
L Y +G L KY+ + R + ++ ALEY+H +IH D+K N+LL+
Sbjct: 111 LSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLN 166
Query: 397 DNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
++M ++DFG AK + E + + T Y++PE E + D+++ G ++ +
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 226
Query: 455 TFIGKKP 461
G P
Sbjct: 227 LVAGLPP 233
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 36/221 (16%)
Query: 335 LILEYKPHGSLEKYLYS----------GNCSLDIFQRLNSMIDVALALEY-MHFGYSAPV 383
++ EY HG L K+L + GN ++ Q + M+ +A + M + S
Sbjct: 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQ--SQMLHIAQQIAAGMVYLASQHF 149
Query: 384 IHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPEYGREGRVSA 441
+H D+ N L+ +N++ + DFG+++ D T+ I +M PE + +
Sbjct: 150 VHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTT 209
Query: 442 NGDVYSFGIMLMKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHF 500
DV+S G++L + F GK+P ++ N E+ I + +L R
Sbjct: 210 ESDVWSLGVVLWEIFTYGKQPWYQLSNNEV-------------IECITQGRVLQRPRT-- 254
Query: 501 VAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIES 541
+E V+ L + C P R N K I T L + ++
Sbjct: 255 CPQE-----VYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 337 LEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396
L Y +G L KY+ + R + ++ ALEY+H +IH D+K N+LL+
Sbjct: 112 LSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLN 167
Query: 397 DNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
++M ++DFG AK + E + + T Y++PE E + D+++ G ++ +
Sbjct: 168 EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 227
Query: 455 TFIGKKP 461
G P
Sbjct: 228 LVAGLPP 234
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNC-----SLDI---------FQRLNS 364
NI + +C+ + +I+EY G+L +YL + S DI F+ L S
Sbjct: 102 NIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 365 MI-DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQ 421
+A +EY+ S IH D+ A NVL+ +N V ++DFG+A+ D T
Sbjct: 162 CTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 422 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
+ +MAPE + + DV+SFG+++ + F +G P I EE+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 337 LEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396
L Y +G L KY+ + R + ++ ALEY+H +IH D+K N+LL+
Sbjct: 109 LSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLN 164
Query: 397 DNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
++M ++DFG AK + E + + T Y++PE E + D+++ G ++ +
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 224
Query: 455 TFIGKKP 461
G P
Sbjct: 225 LVAGLPP 231
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 337 LEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396
L Y +G L KY+ + R + ++ ALEY+H +IH D+K N+LL+
Sbjct: 114 LSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLN 169
Query: 397 DNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
++M ++DFG AK + E + + T Y++PE E + D+++ G ++ +
Sbjct: 170 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 229
Query: 455 TFIGKKP 461
G P
Sbjct: 230 LVAGLPP 236
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 337 LEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396
L Y +G L KY+ + R + ++ ALEY+H +IH D+K N+LL+
Sbjct: 109 LSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLN 164
Query: 397 DNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
++M ++DFG AK + E + + T Y++PE E + D+++ G ++ +
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 224
Query: 455 TFIGKKP 461
G P
Sbjct: 225 LVAGLPP 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 337 LEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396
L Y +G L KY+ + R + ++ ALEY+H +IH D+K N+LL+
Sbjct: 111 LSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLN 166
Query: 397 DNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
++M ++DFG AK + E + + T Y++PE E + D+++ G ++ +
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 226
Query: 455 TFIGKKP 461
G P
Sbjct: 227 LVAGLPP 233
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 337 LEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396
L Y +G L KY+ + R + ++ ALEY+H +IH D+K N+LL+
Sbjct: 111 LSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLN 166
Query: 397 DNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
++M ++DFG AK + E + + T Y++PE E + D+++ G ++ +
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 226
Query: 455 TFIGKKP 461
G P
Sbjct: 227 LVAGLPP 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 337 LEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396
L Y +G L KY+ + R + ++ ALEY+H +IH D+K N+LL+
Sbjct: 112 LSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLN 167
Query: 397 DNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
++M ++DFG AK + E + + T Y++PE E + D+++ G ++ +
Sbjct: 168 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 227
Query: 455 TFIGKKP 461
G P
Sbjct: 228 LVAGLPP 234
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 337 LEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396
L Y +G L KY+ + R + ++ ALEY+H +IH D+K N+LL+
Sbjct: 111 LSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLN 166
Query: 397 DNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
++M ++DFG AK + E + + T Y++PE E + D+++ G ++ +
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 226
Query: 455 TFIGKKP 461
G P
Sbjct: 227 LVAGLPP 233
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 337 LEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396
L Y +G L KY+ + R + ++ ALEY+H +IH D+K N+LL+
Sbjct: 116 LSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLN 171
Query: 397 DNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
++M ++DFG AK + E + + T Y++PE E + D+++ G ++ +
Sbjct: 172 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 231
Query: 455 TFIGKKP 461
G P
Sbjct: 232 LVAGLPP 238
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY GSL + + C +D Q + ALE++H S VIH DIK++N+L
Sbjct: 94 VVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNIL 148
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
L + L+DFG + +++ + T +MAPE D++S GIM ++
Sbjct: 149 LGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 208
Query: 455 TFIGKKP 461
G+ P
Sbjct: 209 MIEGEPP 215
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G + K L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 90 LILEYAPRGEVYKELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 145
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S +T T+ Y+ PE EGR+ D++S G++
Sbjct: 146 LGSAGELKIADFGWSVHA--PSSRRTTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 202
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 203 EFLVGKPP 210
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 337 LEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396
L Y +G L KY+ + R + ++ ALEY+H +IH D+K N+LL+
Sbjct: 111 LSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLN 166
Query: 397 DNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
++M ++DFG AK + E + + T Y++PE E + D+++ G ++ +
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQ 226
Query: 455 TFIGKKP 461
G P
Sbjct: 227 LVAGLPP 233
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNC-----SLDI---------FQRLNS 364
NI + +C+ + +I+EY G+L +YL + S DI F+ L S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 365 MI-DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQ 421
+A +EY+ S IH D+ A NVL+ +N V ++DFG+A+ D T
Sbjct: 162 CTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 422 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
+ +MAPE + + DV+SFG+++ + F +G P I EE+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 26/166 (15%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPE 432
M F S IH D+ A N+LL +N V + DFG+A+ + + T + +MAPE
Sbjct: 212 MEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPE 271
Query: 433 YGREGRVSANGDVYSFGIMLMKTF-IGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDAN 491
+ S DV+S+G++L + F +G P + +D +
Sbjct: 272 SIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGV---------------------QMDED 310
Query: 492 LLS--REDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRL 535
S RE + A E ++ + ++C P++R E+V +L
Sbjct: 311 FCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNC-----SLDI---------FQRLNS 364
NI + +C+ + +I+EY G+L +YL + S DI F+ L S
Sbjct: 89 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 148
Query: 365 MI-DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQ 421
+A +EY+ S IH D+ A NVL+ +N V ++DFG+A+ D T
Sbjct: 149 CTYQLARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 422 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
+ +MAPE + + DV+SFG+++ + F +G P I EE+
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 255
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNC-----SLDI---------FQRLNS 364
NI + +C+ + +I+EY G+L +YL + S DI F+ L S
Sbjct: 91 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 150
Query: 365 MI-DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQ 421
+A +EY+ S IH D+ A NVL+ +N V ++DFG+A+ D T
Sbjct: 151 CTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 422 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
+ +MAPE + + DV+SFG+++ + F +G P I EE+
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 257
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNC-----SLDI---------FQRLNS 364
NI + +C+ + +I+EY G+L +YL + S DI F+ L S
Sbjct: 148 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 207
Query: 365 MI-DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQ 421
+A +EY+ S IH D+ A NVL+ +N V ++DFG+A+ D T
Sbjct: 208 CTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 422 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
+ +MAPE + + DV+SFG+++ + F +G P I EE+
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 314
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNC-----SLDI---------FQRLNS 364
NI + +C+ + +I+EY G+L +YL + S DI F+ L S
Sbjct: 94 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 153
Query: 365 MI-DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQ 421
+A +EY+ S IH D+ A NVL+ +N V ++DFG+A+ D T
Sbjct: 154 CTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 422 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
+ +MAPE + + DV+SFG+++ + F +G P I EE+
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 260
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNC-----SLDI---------FQRLNS 364
NI + +C+ + +I+EY G+L +YL + S DI F+ L S
Sbjct: 102 NIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 365 MI-DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQ 421
+A +EY+ S IH D+ A NVL+ +N V ++DFG+A+ D T
Sbjct: 162 CTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 422 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
+ +MAPE + + DV+SFG+++ + F +G P I EE+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNC-----SLDI---------FQRLNS 364
NI + +C+ + +I+EY G+L +YL + S DI F+ L S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 365 MI-DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQ 421
+A +EY+ S IH D+ A NVL+ +N V ++DFG+A+ D T
Sbjct: 162 CTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 422 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
+ +MAPE + + DV+SFG+++ + F +G P I EE+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 85 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 140
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S +T+ T+ Y+ PE EGR+ D++S G++
Sbjct: 141 LGSAGELKIADFGWSVHA--PSSRRTELCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 197
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 198 EFLVGKPP 205
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNC-----SLDI---------FQRLNS 364
NI + +C+ + +I+EY G+L +YL + S DI F+ L S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 365 MI-DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQ 421
+A +EY+ S IH D+ A NVL+ +N V ++DFG+A+ D T
Sbjct: 162 CTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 422 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
+ +MAPE + + DV+SFG+++ + F +G P I EE+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 14/141 (9%)
Query: 328 SNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSM--IDVALALEYMHFGYSAPVIH 385
++++ +++EY P G L + + D+ ++ +V LAL+ +H S +IH
Sbjct: 145 QDDKYLYMVMEYMPGGDLVNLM----SNYDVPEKWAKFYTAEVVLALDAIH---SMGLIH 197
Query: 386 CDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQT-LATIGYMAPE----YGREGRVS 440
D+K +N+LLD + L+DFG ++ M T + T Y++PE G +G
Sbjct: 198 RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYG 257
Query: 441 ANGDVYSFGIMLMKTFIGKKP 461
D +S G+ L + +G P
Sbjct: 258 RECDWWSVGVFLFEMLVGDTP 278
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+I+E G L +L SLD+ + ++ AL Y+ S +H DI A NVL
Sbjct: 87 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 143
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQ-TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLM 453
+ L DFG+++ ED + + ++ I +MAPE R ++ DV+ FG+ +
Sbjct: 144 VSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 203
Query: 454 KTFI-GKKPTDEIFNEEM 470
+ + G KP + N ++
Sbjct: 204 EILMHGVKPFQGVKNNDV 221
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
+++LAL Y+H +I+ D+K +NVLLD L+D+G+ K G T + T
Sbjct: 114 EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP 170
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTD 463
Y+APE R + D ++ G+++ + G+ P D
Sbjct: 171 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
++EY G L ++ S + D+ + ++ L L+++H S +++ D+K +N+L
Sbjct: 96 FVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNIL 151
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
LD + ++DFG+ K + T Y+APE + + + D +SFG++L +
Sbjct: 152 LDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYE 211
Query: 455 TFIGKKP 461
IG+ P
Sbjct: 212 MLIGQSP 218
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 7/101 (6%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+ A+EY H ++H D+K N+LLDDN+ ++DFG++ D + +T + +
Sbjct: 117 IICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKT-SCGSPN 172
Query: 428 YMAPEYGREGRVSANG--DVYSFGIMLMKTFIGKKPTDEIF 466
Y APE G++ A DV+S GI+L +G+ P D+ F
Sbjct: 173 YAAPEVI-NGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEF 212
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY GSL + + C +D Q + ALE++H S VIH DIK++N+L
Sbjct: 95 VVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNIL 149
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
L + L+DFG + ++ + T +MAPE D++S GIM ++
Sbjct: 150 LGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 209
Query: 455 TFIGKKP 461
G+ P
Sbjct: 210 MIEGEPP 216
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
+++LAL Y+H +I+ D+K +NVLLD L+D+G+ K G T + T
Sbjct: 118 EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP 174
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTD 463
Y+APE R + D ++ G+++ + G+ P D
Sbjct: 175 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
+++LAL Y+H +I+ D+K +NVLLD L+D+G+ K G T + T
Sbjct: 129 EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP 185
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTD 463
Y+APE R + D ++ G+++ + G+ P D
Sbjct: 186 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY GSL + + C +D Q + ALE++H S VIH DIK++N+L
Sbjct: 94 VVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNIL 148
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
L + L+DFG + ++ + T +MAPE D++S GIM ++
Sbjct: 149 LGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 208
Query: 455 TFIGKKP 461
G+ P
Sbjct: 209 MIEGEPP 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY GSL + + C +D Q + ALE++H S VIH DIK++N+L
Sbjct: 94 VVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNIL 148
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
L + L+DFG + ++ + T +MAPE D++S GIM ++
Sbjct: 149 LGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 208
Query: 455 TFIGKKP 461
G+ P
Sbjct: 209 MIEGEPP 215
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 85 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 140
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S +T T+ Y+ PE EGR+ D++S G++
Sbjct: 141 LGSAGELKIADFGWSVHA--PSSRRTDLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 197
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 198 EFLVGKPP 205
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
+++LAL Y+H +I+ D+K +NVLLD L+D+G+ K G T + T
Sbjct: 161 EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP 217
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTD 463
Y+APE R + D ++ G+++ + G+ P D
Sbjct: 218 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G L K L +C+ D + M ++A AL Y H VIH DIK N+L
Sbjct: 100 LILEYAPRGELYKEL-QKSCTFDEQRTATIMEELADALMYCH---GKKVIHRDIKPENLL 155
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLM 453
L ++DFG + S+ + T+ Y+ PE EGR+ + D++ G++
Sbjct: 156 LGLKGELKIADFGWSVHAP--SLRRKTMCGTLDYLPPEMI-EGRMHNEKVDLWCIGVLCY 212
Query: 454 KTFIGKKP 461
+ +G P
Sbjct: 213 ELLVGNPP 220
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
+ L +Y+H VIH D+K N+ L++++ + DFG+A E + T
Sbjct: 125 QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTP 181
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWL------ 480
Y+APE + S DV+S G ++ +GK P + +E L+ N++
Sbjct: 182 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHIN 241
Query: 481 PIS---IMEVIDANLLSREDIHFVAKEQFMSFVF---NLAMECTVESPEQRINP 528
P++ I +++ + +R I+ + ++F + + L + C P I P
Sbjct: 242 PVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAP 295
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 86 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 141
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S +T T+ Y+ PE EGR+ D++S G++
Sbjct: 142 LGSAGELKIADFGWSVHA--PSSRRTDLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 198
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 199 EFLVGKPP 206
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 87/213 (40%), Gaps = 26/213 (12%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
++L Y HG L ++ + + + + + VA ++Y+ S +H D+ A N +
Sbjct: 101 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCM 157
Query: 395 LDDNMVAHLSDFGIAKTGEDQSM----TQTQTLATIGYMAPEYGREGRVSANGDVYSFGI 450
LD+ ++DFG+A+ D+ +T + +MA E + + + DV+SFG+
Sbjct: 158 LDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 217
Query: 451 MLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFV 510
+L + P P + D + + + E +
Sbjct: 218 LLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPL 258
Query: 511 FNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543
+ + ++C E R + E+V+R+ I + +
Sbjct: 259 YEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 291
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
+ L +Y+H VIH D+K N+ L++++ + DFG+A E + T
Sbjct: 129 QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTP 185
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWL------ 480
Y+APE + S DV+S G ++ +GK P + +E L+ N++
Sbjct: 186 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHIN 245
Query: 481 PIS---IMEVIDANLLSREDIHFVAKEQFMSFVF---NLAMECTVESPEQRINP 528
P++ I +++ + +R I+ + ++F + + L + C P I P
Sbjct: 246 PVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAP 299
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 87/213 (40%), Gaps = 26/213 (12%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
++L Y HG L ++ + + + + + VA ++Y+ S +H D+ A N +
Sbjct: 108 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCM 164
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMT----QTQTLATIGYMAPEYGREGRVSANGDVYSFGI 450
LD+ ++DFG+A+ D+ +T + +MA E + + + DV+SFG+
Sbjct: 165 LDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 224
Query: 451 MLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFV 510
+L + P P + D + + + E +
Sbjct: 225 LLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPL 265
Query: 511 FNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543
+ + ++C E R + E+V+R+ I + +
Sbjct: 266 YEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 298
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 85 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 140
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S +T T+ Y+ PE EGR+ D++S G++
Sbjct: 141 LGSAGELKIADFGWSVHA--PSSRRTDLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 197
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 198 EFLVGKPP 205
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 85 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 140
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S +T T+ Y+ PE EGR+ D++S G++
Sbjct: 141 LGSAGELKIADFGWSVHA--PSSRRTXLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 197
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 198 EFLVGKPP 205
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 87/213 (40%), Gaps = 26/213 (12%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
++L Y HG L ++ + + + + + VA ++Y+ S +H D+ A N +
Sbjct: 104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCM 160
Query: 395 LDDNMVAHLSDFGIAKTGEDQSM----TQTQTLATIGYMAPEYGREGRVSANGDVYSFGI 450
LD+ ++DFG+A+ D+ +T + +MA E + + + DV+SFG+
Sbjct: 161 LDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 220
Query: 451 MLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFV 510
+L + P P + D + + + E +
Sbjct: 221 LLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPL 261
Query: 511 FNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543
+ + ++C E R + E+V+R+ I + +
Sbjct: 262 YEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 87/213 (40%), Gaps = 26/213 (12%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
++L Y HG L ++ + + + + + VA ++Y+ S +H D+ A N +
Sbjct: 107 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCM 163
Query: 395 LDDNMVAHLSDFGIAKTGEDQSM----TQTQTLATIGYMAPEYGREGRVSANGDVYSFGI 450
LD+ ++DFG+A+ D+ +T + +MA E + + + DV+SFG+
Sbjct: 164 LDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 223
Query: 451 MLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFV 510
+L + P P + D + + + E +
Sbjct: 224 LLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPL 264
Query: 511 FNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543
+ + ++C E R + E+V+R+ I + +
Sbjct: 265 YEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 297
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 102 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 157
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S +T T+ Y+ PE EGR+ D++S G++
Sbjct: 158 LGSAGELKIADFGWSVHA--PSSRRTTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 214
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 215 EFLVGKPP 222
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 87/213 (40%), Gaps = 26/213 (12%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
++L Y HG L ++ + + + + + VA ++Y+ S +H D+ A N +
Sbjct: 109 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCM 165
Query: 395 LDDNMVAHLSDFGIAKTGEDQSM----TQTQTLATIGYMAPEYGREGRVSANGDVYSFGI 450
LD+ ++DFG+A+ D+ +T + +MA E + + + DV+SFG+
Sbjct: 166 LDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 225
Query: 451 MLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFV 510
+L + P P + D + + + E +
Sbjct: 226 LLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPL 266
Query: 511 FNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543
+ + ++C E R + E+V+R+ I + +
Sbjct: 267 YEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 111 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 166
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S +T T+ Y+ PE EGR+ D++S G++
Sbjct: 167 LGSAGELKIADFGWSVHA--PSSRRTTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 223
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 224 EFLVGKPP 231
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 90 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 145
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S +T T+ Y+ PE EGR+ D++S G++
Sbjct: 146 LGSAGELKIADFGWSVHA--PSSRRTDLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 202
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 203 EFLVGKPP 210
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 87/213 (40%), Gaps = 26/213 (12%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
++L Y HG L ++ + + + + + VA ++Y+ S +H D+ A N +
Sbjct: 128 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCM 184
Query: 395 LDDNMVAHLSDFGIAKTGEDQSM----TQTQTLATIGYMAPEYGREGRVSANGDVYSFGI 450
LD+ ++DFG+A+ D+ +T + +MA E + + + DV+SFG+
Sbjct: 185 LDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 244
Query: 451 MLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFV 510
+L + P P + D + + + E +
Sbjct: 245 LLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPL 285
Query: 511 FNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543
+ + ++C E R + E+V+R+ I + +
Sbjct: 286 YEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 318
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 84 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 139
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S +T T+ Y+ PE EGR+ D++S G++
Sbjct: 140 LGSAGELKIADFGWSVHA--PSSRRTTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 196
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 197 EFLVGKPP 204
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 82 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 137
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S +T T+ Y+ PE EGR+ D++S G++
Sbjct: 138 LGSAGELKIADFGWSVHA--PSSRRTTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 194
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 195 EFLVGKPP 202
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Query: 385 HCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQ-TQTLATIGYMAPEYGREGRVSANG 443
H D+K N+L+ + A+L DFGIA D+ +TQ T+ T+ Y APE E +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 444 DVYSFGIMLMKTFIGKKP--TDEI------FNEEMTLKHWVNDWLPISIMEVI 488
D+Y+ +L + G P D++ N+ + V +P++ VI
Sbjct: 217 DIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIPRPSTVRPGIPVAFDAVI 269
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 23/168 (13%)
Query: 366 IDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLAT 425
+ V AL Y+H + VIH DIK++++LL + LSDFG + + + T
Sbjct: 148 LSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGT 204
Query: 426 IGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIM 485
+MAPE D++S GIM+++ G+ P FNE P+ M
Sbjct: 205 PYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP---YFNEP-----------PLQAM 250
Query: 486 EVIDANLLSR-EDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIV 532
I +L R +D+H V+ + +L + V P QR +E++
Sbjct: 251 RRIRDSLPPRVKDLHKVSS--VLRGFLDLML---VREPSQRATAQELL 293
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 85 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 140
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S +T T+ Y+ PE EGR+ D++S G++
Sbjct: 141 LGSAGELKIADFGWSVHAP--SSRRTTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 197
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 198 EFLVGKPP 205
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 87/213 (40%), Gaps = 26/213 (12%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
++L Y HG L ++ + + + + + VA ++Y+ S +H D+ A N +
Sbjct: 108 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCM 164
Query: 395 LDDNMVAHLSDFGIAKTGEDQSM----TQTQTLATIGYMAPEYGREGRVSANGDVYSFGI 450
LD+ ++DFG+A+ D+ +T + +MA E + + + DV+SFG+
Sbjct: 165 LDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 224
Query: 451 MLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFV 510
+L + P P + D + + + E +
Sbjct: 225 LLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPL 265
Query: 511 FNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543
+ + ++C E R + E+V+R+ I + +
Sbjct: 266 YEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 298
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 88 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 143
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S +T T+ Y+ PE EGR+ D++S G++
Sbjct: 144 LGSAGELKIADFGWSVHA--PSSRRTTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 200
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 201 EFLVGKPP 208
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 90 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 145
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S +T T+ Y+ PE EGR+ D++S G++
Sbjct: 146 LGSAGELKIADFGWSVHAP--SSRRTTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 202
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 203 EFLVGKPP 210
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 88 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 143
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S +T T+ Y+ PE EGR+ D++S G++
Sbjct: 144 LGSAGELKIADFGWSVHA--PSSRRTTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 200
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 201 EFLVGKPP 208
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 87/213 (40%), Gaps = 26/213 (12%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
++L Y HG L ++ + + + + + VA ++Y+ S +H D+ A N +
Sbjct: 109 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCM 165
Query: 395 LDDNMVAHLSDFGIAKTGEDQSM----TQTQTLATIGYMAPEYGREGRVSANGDVYSFGI 450
LD+ ++DFG+A+ D+ +T + +MA E + + + DV+SFG+
Sbjct: 166 LDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 225
Query: 451 MLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFV 510
+L + P P + D + + + E +
Sbjct: 226 LLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPL 266
Query: 511 FNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543
+ + ++C E R + E+V+R+ I + +
Sbjct: 267 YEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 89 LILEYAPLGTVYRELQKLS-RFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 144
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L N ++DFG + S +T T+ Y+ PE EGR+ D++S G++
Sbjct: 145 LGSNGELKIADFGWSVHAP--SSRRTTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 201
Query: 454 KTFIGKKP 461
+ +G P
Sbjct: 202 EFLVGMPP 209
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 87/213 (40%), Gaps = 26/213 (12%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
++L Y HG L ++ + + + + + VA ++Y+ S +H D+ A N +
Sbjct: 127 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCM 183
Query: 395 LDDNMVAHLSDFGIAKTGEDQSM----TQTQTLATIGYMAPEYGREGRVSANGDVYSFGI 450
LD+ ++DFG+A+ D+ +T + +MA E + + + DV+SFG+
Sbjct: 184 LDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 243
Query: 451 MLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFV 510
+L + P P + D + + + E +
Sbjct: 244 LLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPL 284
Query: 511 FNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543
+ + ++C E R + E+V+R+ I + +
Sbjct: 285 YEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 317
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
+ L +Y+H VIH D+K N+ L++++ + DFG+A E + T
Sbjct: 125 QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTP 181
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWL------ 480
Y+APE + S DV+S G ++ +GK P + +E L+ N++
Sbjct: 182 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHIN 241
Query: 481 PIS---IMEVIDANLLSREDIHFVAKEQFMSFVF---NLAMECTVESPEQRINP 528
P++ I +++ + +R I+ + ++F + + L + C P I P
Sbjct: 242 PVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPXFSIAP 295
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 87/213 (40%), Gaps = 26/213 (12%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
++L Y HG L ++ + + + + + VA ++Y+ S +H D+ A N +
Sbjct: 106 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCM 162
Query: 395 LDDNMVAHLSDFGIAKTGEDQSM----TQTQTLATIGYMAPEYGREGRVSANGDVYSFGI 450
LD+ ++DFG+A+ D+ +T + +MA E + + + DV+SFG+
Sbjct: 163 LDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 222
Query: 451 MLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFV 510
+L + P P + D + + + E +
Sbjct: 223 LLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPL 263
Query: 511 FNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543
+ + ++C E R + E+V+R+ I + +
Sbjct: 264 YEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 296
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 89 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 144
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S +T T+ Y+ PE EGR+ D++S G++
Sbjct: 145 LGSAGELKIADFGWSVHA--PSSRRTTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 201
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 202 EFLVGKPP 209
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
++EY G L ++ S + D+ + ++ L L+++H S +++ D+K +N+L
Sbjct: 95 FVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNIL 150
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
LD + ++DFG+ K T Y+APE + + + D +SFG++L +
Sbjct: 151 LDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYE 210
Query: 455 TFIGKKP 461
IG+ P
Sbjct: 211 MLIGQSP 217
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+I+E G L +L SLD+ + ++ AL Y+ S +H DI A NVL
Sbjct: 467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 523
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQ-TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLM 453
+ L DFG+++ ED + + ++ I +MAPE R ++ DV+ FG+ +
Sbjct: 524 VSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 583
Query: 454 KTFI-GKKPTDEIFNEEM 470
+ + G KP + N ++
Sbjct: 584 EILMHGVKPFQGVKNNDV 601
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 17/182 (9%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+L+Y G L +L C L+ R + ++A AL Y+H S +++ D+K N+L
Sbjct: 116 FVLDYINGGELFYHLQRERCFLEPRARFYAA-EIASALGYLH---SLNIVYRDLKPENIL 171
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
LD L+DFG+ K + + T + T Y+APE + D + G +L +
Sbjct: 172 LDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYE 231
Query: 455 TFIGKKP---------TDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQ 505
G P D I N+ + LK + + S +++ L AK+
Sbjct: 232 MLYGLPPFYSRNTAEMYDNILNKPLQLKPNITN----SARHLLEGLLQKDRTKRLGAKDD 287
Query: 506 FM 507
FM
Sbjct: 288 FM 289
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 90 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 145
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S +T T+ Y+ PE EGR D++S G++
Sbjct: 146 LGSAGELKIADFGWSVHAP--SSRRTTLCGTLDYLPPEXI-EGRXHDEKVDLWSLGVLCY 202
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 203 EFLVGKPP 210
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
+ L +Y+H VIH D+K N+ L++++ + DFG+A E + T
Sbjct: 147 QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTP 203
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWL------ 480
Y+APE + S DV+S G ++ +GK P + +E L+ N++
Sbjct: 204 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHIN 263
Query: 481 PIS---IMEVIDANLLSREDIHFVAKEQFMSFVF---NLAMECTVESPEQRINP 528
P++ I +++ + +R I+ + ++F + + L + C P I P
Sbjct: 264 PVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAP 317
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
+ L +Y+H VIH D+K N+ L++++ + DFG+A E + T
Sbjct: 149 QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTP 205
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWL------ 480
Y+APE + S DV+S G ++ +GK P + +E L+ N++
Sbjct: 206 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHIN 265
Query: 481 PIS---IMEVIDANLLSREDIHFVAKEQFMSFVF---NLAMECTVESPEQRINP 528
P++ I +++ + +R I+ + ++F + + L + C P I P
Sbjct: 266 PVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAP 319
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 328 SNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSM--IDVALALEYMHFGYSAPVIH 385
++ + +++EY P G L + + D+ ++ +V LAL+ +H S IH
Sbjct: 144 QDDRYLYMVMEYMPGGDLVNLM----SNYDVPEKWARFYTAEVVLALDAIH---SMGFIH 196
Query: 386 CDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQT-LATIGYMAPE----YGREGRVS 440
D+K +N+LLD + L+DFG + M + T + T Y++PE G +G
Sbjct: 197 RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYG 256
Query: 441 ANGDVYSFGIMLMKTFIGKKP 461
D +S G+ L + +G P
Sbjct: 257 RECDWWSVGVFLYEMLVGDTP 277
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G + K L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 90 LILEYAPRGEVYKELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 145
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S + T+ Y+ PE EGR+ D++S G++
Sbjct: 146 LGSAGELKIADFGWSVHA--PSSRRXXLXGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 202
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 203 EFLVGKPP 210
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 328 SNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSM--IDVALALEYMHFGYSAPVIH 385
++ + +++EY P G L + + D+ ++ +V LAL+ +H S IH
Sbjct: 139 QDDRYLYMVMEYMPGGDLVNLM----SNYDVPEKWARFYTAEVVLALDAIH---SMGFIH 191
Query: 386 CDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQT-LATIGYMAPE----YGREGRVS 440
D+K +N+LLD + L+DFG + M + T + T Y++PE G +G
Sbjct: 192 RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYG 251
Query: 441 ANGDVYSFGIMLMKTFIGKKP 461
D +S G+ L + +G P
Sbjct: 252 RECDWWSVGVFLYEMLVGDTP 272
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 328 SNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSM--IDVALALEYMHFGYSAPVIH 385
++ + +++EY P G L + + D+ ++ +V LAL+ +H S IH
Sbjct: 144 QDDRYLYMVMEYMPGGDLVNLM----SNYDVPEKWARFYTAEVVLALDAIH---SMGFIH 196
Query: 386 CDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQT-LATIGYMAPE----YGREGRVS 440
D+K +N+LLD + L+DFG + M + T + T Y++PE G +G
Sbjct: 197 RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYG 256
Query: 441 ANGDVYSFGIMLMKTFIGKKP 461
D +S G+ L + +G P
Sbjct: 257 RECDWWSVGVFLYEMLVGDTP 277
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 72/148 (48%), Gaps = 15/148 (10%)
Query: 335 LILEYKPHGSLEKYLYS---------GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIH 385
+++E HG L+ YL S G + + + ++A + Y++ + +H
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 153
Query: 386 CDIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANG 443
D+ A N ++ + + DFG+ + D + L + +MAPE ++G + +
Sbjct: 154 RDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSS 213
Query: 444 DVYSFGIMLMK-TFIGKKPTDEIFNEEM 470
D++SFG++L + T + ++P + NE++
Sbjct: 214 DMWSFGVVLWEITSLAEQPYQGLSNEQV 241
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 86 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 141
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S +T T+ Y+ PE EGR+ D++S G++
Sbjct: 142 LGSAGELKIADFGW--SCHAPSSRRTTLSGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 198
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 199 EFLVGKPP 206
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 72/148 (48%), Gaps = 15/148 (10%)
Query: 335 LILEYKPHGSLEKYLYS---------GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIH 385
+++E HG L+ YL S G + + + ++A + Y++ + +H
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 153
Query: 386 CDIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANG 443
D+ A N ++ + + DFG+ + D + L + +MAPE ++G + +
Sbjct: 154 RDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSS 213
Query: 444 DVYSFGIMLMK-TFIGKKPTDEIFNEEM 470
D++SFG++L + T + ++P + NE++
Sbjct: 214 DMWSFGVVLWEITSLAEQPYQGLSNEQV 241
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
+ L +Y+H VIH D+K N+ L++++ + DFG+A E + T
Sbjct: 123 QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTP 179
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWL------ 480
Y+APE + S DV+S G ++ +GK P + +E L+ N++
Sbjct: 180 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHIN 239
Query: 481 PIS---IMEVIDANLLSREDIHFVAKEQFMSFVF---NLAMECTVESPEQRINP 528
P++ I +++ + +R I+ + ++F + + L + C P I P
Sbjct: 240 PVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAP 293
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 72/148 (48%), Gaps = 15/148 (10%)
Query: 335 LILEYKPHGSLEKYLYS---------GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIH 385
+++E HG L+ YL S G + + + ++A + Y++ + +H
Sbjct: 94 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 150
Query: 386 CDIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANG 443
D+ A N ++ + + DFG+ + D + L + +MAPE ++G + +
Sbjct: 151 RDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSS 210
Query: 444 DVYSFGIMLMK-TFIGKKPTDEIFNEEM 470
D++SFG++L + T + ++P + NE++
Sbjct: 211 DMWSFGVVLWEITSLAEQPYQGLSNEQV 238
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/213 (18%), Positives = 87/213 (40%), Gaps = 26/213 (12%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
++L Y HG L ++ + + + + + VA ++++ S +H D+ A N +
Sbjct: 109 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCM 165
Query: 395 LDDNMVAHLSDFGIAKTGEDQSM----TQTQTLATIGYMAPEYGREGRVSANGDVYSFGI 450
LD+ ++DFG+A+ D+ +T + +MA E + + + DV+SFG+
Sbjct: 166 LDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 225
Query: 451 MLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFV 510
+L + P P + D + + + E +
Sbjct: 226 LLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPL 266
Query: 511 FNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543
+ + ++C E R + E+V+R+ I + +
Sbjct: 267 YEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/213 (18%), Positives = 87/213 (40%), Gaps = 26/213 (12%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
++L Y HG L ++ + + + + + VA ++++ S +H D+ A N +
Sbjct: 109 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCM 165
Query: 395 LDDNMVAHLSDFGIAKTGEDQSM----TQTQTLATIGYMAPEYGREGRVSANGDVYSFGI 450
LD+ ++DFG+A+ D+ +T + +MA E + + + DV+SFG+
Sbjct: 166 LDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 225
Query: 451 MLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFV 510
+L + P P + D + + + E +
Sbjct: 226 LLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPL 266
Query: 511 FNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543
+ + ++C E R + E+V+R+ I + +
Sbjct: 267 YEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/213 (18%), Positives = 87/213 (40%), Gaps = 26/213 (12%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
++L Y HG L ++ + + + + + VA ++++ S +H D+ A N +
Sbjct: 114 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCM 170
Query: 395 LDDNMVAHLSDFGIAKTGEDQSM----TQTQTLATIGYMAPEYGREGRVSANGDVYSFGI 450
LD+ ++DFG+A+ D+ +T + +MA E + + + DV+SFG+
Sbjct: 171 LDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 230
Query: 451 MLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFV 510
+L + P P + D + + + E +
Sbjct: 231 LLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPL 271
Query: 511 FNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543
+ + ++C E R + E+V+R+ I + +
Sbjct: 272 YEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 304
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
LEY+H + ++H D+K NN+LLD+N V L+DFG+AK+ + + T Y A
Sbjct: 124 GLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRA 180
Query: 431 PEYGREGRVSANG-DVYSFGIMLMKTFI 457
PE R+ G D+++ G +L + +
Sbjct: 181 PELLFGARMYGVGVDMWAVGCILAELLL 208
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNC-----SLDI---------FQRLNS 364
NI + +C+ + +I+ Y G+L +YL + S DI F+ L S
Sbjct: 102 NIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 365 MI-DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQ 421
+A +EY+ S IH D+ A NVL+ +N V ++DFG+A+ D T
Sbjct: 162 CTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 422 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
+ +MAPE + + DV+SFG+++ + F +G P I EE+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/213 (18%), Positives = 87/213 (40%), Gaps = 26/213 (12%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
++L Y HG L ++ + + + + + VA ++++ S +H D+ A N +
Sbjct: 107 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCM 163
Query: 395 LDDNMVAHLSDFGIAKTGEDQSM----TQTQTLATIGYMAPEYGREGRVSANGDVYSFGI 450
LD+ ++DFG+A+ D+ +T + +MA E + + + DV+SFG+
Sbjct: 164 LDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 223
Query: 451 MLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFV 510
+L + P P + D + + + E +
Sbjct: 224 LLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPL 264
Query: 511 FNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543
+ + ++C E R + E+V+R+ I + +
Sbjct: 265 YEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 297
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/213 (18%), Positives = 87/213 (40%), Gaps = 26/213 (12%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
++L Y HG L ++ + + + + + VA ++++ S +H D+ A N +
Sbjct: 110 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCM 166
Query: 395 LDDNMVAHLSDFGIAKTGEDQSM----TQTQTLATIGYMAPEYGREGRVSANGDVYSFGI 450
LD+ ++DFG+A+ D+ +T + +MA E + + + DV+SFG+
Sbjct: 167 LDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 226
Query: 451 MLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFV 510
+L + P P + D + + + E +
Sbjct: 227 LLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPL 267
Query: 511 FNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543
+ + ++C E R + E+V+R+ I + +
Sbjct: 268 YEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 300
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 6/137 (4%)
Query: 328 SNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALAL-EYMHFGYSAPVIHC 386
+ EE +I E+ GSL +L S + +L ID + + E M + IH
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKL---IDFSAQIAEGMAYIERKNYIHR 133
Query: 387 DIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDV 445
D++A NVL+ ++++ ++DFG+A+ ED T + I + APE G + +V
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNV 193
Query: 446 YSFGIMLMKTFI-GKKP 461
+SFGI+L + GK P
Sbjct: 194 WSFGILLYEIVTYGKIP 210
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
++ LE +H +++ D+K N+LLDD+ +SD G+A + T + T+
Sbjct: 294 EICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA-VHVPEGQTIKGRVGTV 349
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
GYMAPE + R + + D ++ G +L + G+ P
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
++ LE +H +++ D+K N+LLDD+ +SD G+A + T + T+
Sbjct: 294 EICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA-VHVPEGQTIKGRVGTV 349
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
GYMAPE + R + + D ++ G +L + G+ P
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 85 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKKVIHRDIKPENLL 140
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S + T+ Y+ PE EGR+ D++S G++
Sbjct: 141 LGSAGELKIADFGWSVHA--PSSRRAALCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 197
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 198 EFLVGKPP 205
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 359 FQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMT 418
F + A + + F + +I+ D+K +NVLLD L+DFG+ K G +T
Sbjct: 121 FDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT 180
Query: 419 QTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP-----TDEIF----NEE 469
T Y+APE +E D ++ G++L + G P D++F N+E
Sbjct: 181 TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE 240
Query: 470 MTLKHWVND 478
+ W+++
Sbjct: 241 VVYPTWLHE 249
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY GSL + + C +D Q + ALE++H S VIH +IK++N+L
Sbjct: 95 VVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLH---SNQVIHRNIKSDNIL 149
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
L + L+DFG + ++ + T +MAPE D++S GIM ++
Sbjct: 150 LGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 209
Query: 455 TFIGKKP 461
G+ P
Sbjct: 210 MIEGEPP 216
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 14/141 (9%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEY-----------MHFGYSAPV 383
+I+E+ G+L YL S ++ + L LE+ M F S
Sbjct: 110 VIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC 169
Query: 384 IHCDIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSA 441
IH D+ A N+LL + V + DFG+A+ + + + + +MAPE + +
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 442 NGDVYSFGIMLMKTF-IGKKP 461
DV+SFG++L + F +G P
Sbjct: 230 QSDVWSFGVLLWEIFSLGASP 250
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/213 (18%), Positives = 87/213 (40%), Gaps = 26/213 (12%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
++L Y HG L ++ + + + + + VA ++++ S +H D+ A N +
Sbjct: 110 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCM 166
Query: 395 LDDNMVAHLSDFGIAKTGEDQSM----TQTQTLATIGYMAPEYGREGRVSANGDVYSFGI 450
LD+ ++DFG+A+ D+ +T + +MA E + + + DV+SFG+
Sbjct: 167 LDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 226
Query: 451 MLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFV 510
+L + P P + D + + + E +
Sbjct: 227 LLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPL 267
Query: 511 FNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543
+ + ++C E R + E+V+R+ I + +
Sbjct: 268 YEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 300
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNC-----SLDI---------FQRLNS 364
NI + +C+ + +I+ Y G+L +YL + S DI F+ L S
Sbjct: 102 NIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 365 MI-DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQ 421
+A +EY+ S IH D+ A NVL+ +N V ++DFG+A+ D T
Sbjct: 162 CTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 422 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
+ +MAPE + + DV+SFG+++ + F +G P I EE+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/213 (18%), Positives = 87/213 (40%), Gaps = 26/213 (12%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
++L Y HG L ++ + + + + + VA ++++ S +H D+ A N +
Sbjct: 168 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCM 224
Query: 395 LDDNMVAHLSDFGIAKTGEDQSM----TQTQTLATIGYMAPEYGREGRVSANGDVYSFGI 450
LD+ ++DFG+A+ D+ +T + +MA E + + + DV+SFG+
Sbjct: 225 LDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 284
Query: 451 MLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMSFV 510
+L + P P + D + + + E +
Sbjct: 285 LLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPL 325
Query: 511 FNLAMECTVESPEQRINPKEIVTRLLKIIESLL 543
+ + ++C E R + E+V+R+ I + +
Sbjct: 326 YEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 22/146 (15%)
Query: 314 PSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALE 373
P N N S T C + +E+ G+LE++ I +R +D LALE
Sbjct: 95 PENSKNSSRSKTKCL-----FIQMEFCDKGTLEQW---------IEKRRGEKLDKVLALE 140
Query: 374 Y-------MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
+ + +S +IH D+K +N+ L D + DFG+ T +T++ T+
Sbjct: 141 LFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLV-TSLKNDGKRTRSKGTL 199
Query: 427 GYMAPEYGREGRVSANGDVYSFGIML 452
YM+PE D+Y+ G++L
Sbjct: 200 RYMSPEQISSQDYGKEVDLYALGLIL 225
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 85 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 140
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S + T+ Y+ PE EGR+ D++S G++
Sbjct: 141 LGSAGELKIADFGWSVHA--PSSRRAALCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 197
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 198 EFLVGKPP 205
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT-GEDQSMTQTQTLAT 425
++ LALE++H +I+ DIK N+LLD N L+DFG++K D++ T
Sbjct: 167 EIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGT 223
Query: 426 IGYMAPEYGREGRVSANG--DVYSFGIMLMKTFIGKKP 461
I YMAP+ R G + D +S G+++ + G P
Sbjct: 224 IEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 22/190 (11%)
Query: 274 SIHHASWKNALLLRTVLPLRTIFMIVVILLI-LRCRKRGKRPSNDANISPVATSCSNEEF 332
++ WK L V L+ M V L K K P N+ + C+ E
Sbjct: 29 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP----NLVQLLGVCTREPP 84
Query: 333 KALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMI------DVALALEYMHFGYSAPVIHC 386
+I+E+ +G+L YL N Q +N+++ ++ A+EY+ IH
Sbjct: 85 FYIIIEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKNFIHR 136
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGD 444
D+ A N L+ +N + ++DFG+++ TG D I + APE + S D
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 195
Query: 445 VYSFGIMLMK 454
V++FG++L +
Sbjct: 196 VWAFGVLLWE 205
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 87 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 142
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L +++FG + S +T T+ Y+ PE EGR+ D++S G++
Sbjct: 143 LGSAGELKIANFGWSVHAP--SSRRTTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 199
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 200 EFLVGKPP 207
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 111 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 166
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S + T+ Y+ PE EGR+ D++S G++
Sbjct: 167 LGSAGELKIADFGWSVHA--PSSRRDDLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 223
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 224 EFLVGKPP 231
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 87 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 142
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S + T+ Y+ PE EGR+ D++S G++
Sbjct: 143 LGSAGELKIADFGWSVHAP--SSRRXXLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 199
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 200 EFLVGKPP 207
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
++ ALEY+H S V++ DIK N++LD + ++DFG+ K G T T
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTP 169
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D + G+++ + G+ P
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 88 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 143
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S + T+ Y+ PE EGR+ D++S G++
Sbjct: 144 LGSAGELKIADFGWSVHAP--SSRRAALCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 200
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 201 EFLVGKPP 208
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 72/148 (48%), Gaps = 15/148 (10%)
Query: 335 LILEYKPHGSLEKYLYS---------GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIH 385
+++E HG L+ YL S G + + + ++A + Y++ + +H
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 153
Query: 386 CDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPEYGREGRVSANG 443
D+ A N ++ + + DFG+ + D + L + +MAPE ++G + +
Sbjct: 154 RDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSS 213
Query: 444 DVYSFGIMLMK-TFIGKKPTDEIFNEEM 470
D++SFG++L + T + ++P + NE++
Sbjct: 214 DMWSFGVVLWEITSLAEQPYQGLSNEQV 241
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
I EY G+L + S + QR++ D+A + Y+H S +IH D+ ++N L
Sbjct: 84 FITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCL 140
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG---------------YMAPEYGREGRV 439
+ +N ++DFG+A+ D+ TQ + L ++ +MAPE
Sbjct: 141 VRENKNVVVADFGLARLMVDEK-TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSY 199
Query: 440 SANGDVYSFGIMLMKTFIGKKPTD 463
DV+SFGI+L + IG+ D
Sbjct: 200 DEKVDVFSFGIVLCE-IIGRVNAD 222
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 88 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 143
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S + T+ Y+ PE EGR+ D++S G++
Sbjct: 144 LGSAGELKIADFGWSVHA--PSSRRXXLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 200
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 201 EFLVGKPP 208
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 85 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 140
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S + T+ Y+ PE EGR+ D++S G++
Sbjct: 141 LGSAGELKIADFGWSVHA--PSSRRXXLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 197
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 198 EFLVGKPP 205
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 88 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 143
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L +++FG + S +T T+ Y+ PE EGR+ D++S G++
Sbjct: 144 LGSAGELKIANFGWSVHA--PSSRRTTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 200
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 201 EFLVGKPP 208
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 88 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 143
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S + T+ Y+ PE EGR+ D++S G++
Sbjct: 144 LGSAGELKIADFGWSVHA--PSSRRDDLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 200
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 201 EFLVGKPP 208
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
++ ALEY+H S V++ DIK N++LD + ++DFG+ K G T T
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTP 169
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D + G+++ + G+ P
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
++ ALEY+H S V++ DIK N++LD + ++DFG+ K G T T
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP 169
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D + G+++ + G+ P
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
++ ALEY+H S V++ DIK N++LD + ++DFG+ K G T T
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTP 169
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D + G+++ + G+ P
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
++ ALEY+H S V++ DIK N++LD + ++DFG+ K G T T
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP 169
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D + G+++ + G+ P
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQ-TLAT 425
++ L LE+MH + V++ D+K N+LLD++ +SD G+A D S + ++ T
Sbjct: 299 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLAC---DFSKKKPHASVGT 352
Query: 426 IGYMAPEYGREG-RVSANGDVYSFGIMLMKTFIGKKP 461
GYMAPE ++G ++ D +S G ML K G P
Sbjct: 353 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
++ ALEY+H S V++ DIK N++LD + ++DFG+ K G T T
Sbjct: 118 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTP 174
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D + G+++ + G+ P
Sbjct: 175 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 7/136 (5%)
Query: 330 EEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIK 389
E ++L Y HG L +++ S + + ++ + VA +EY+ +H D+
Sbjct: 95 EGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---AEQKFVHRDLA 151
Query: 390 ANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQ----TLATIGYMAPEYGREGRVSANGDV 445
A N +LD++ ++DFG+A+ D+ Q + + A E + R + DV
Sbjct: 152 ARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDV 211
Query: 446 YSFGIMLMKTFIGKKP 461
+SFG++L + P
Sbjct: 212 WSFGVLLWELLTRGAP 227
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 86 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 141
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L ++DFG + S + T+ Y+ PE EGR+ D++S G++
Sbjct: 142 LGSAGELKIADFGWSVHA--PSSRRDTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 198
Query: 454 KTFIGKKP 461
+ +GK P
Sbjct: 199 EFLVGKPP 206
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQ-TLAT 425
++ L LE+MH + V++ D+K N+LLD++ +SD G+A D S + ++ T
Sbjct: 300 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLAC---DFSKKKPHASVGT 353
Query: 426 IGYMAPEYGREG-RVSANGDVYSFGIMLMKTFIGKKP 461
GYMAPE ++G ++ D +S G ML K G P
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQ-TLAT 425
++ L LE+MH + V++ D+K N+LLD++ +SD G+A D S + ++ T
Sbjct: 300 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLAC---DFSKKKPHASVGT 353
Query: 426 IGYMAPEYGREG-RVSANGDVYSFGIMLMKTFIGKKP 461
GYMAPE ++G ++ D +S G ML K G P
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQ-TLAT 425
++ L LE+MH + V++ D+K N+LLD++ +SD G+A D S + ++ T
Sbjct: 300 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLAC---DFSKKKPHASVGT 353
Query: 426 IGYMAPEYGREG-RVSANGDVYSFGIMLMKTFIGKKP 461
GYMAPE ++G ++ D +S G ML K G P
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 365 MIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA 424
M ++Y+H + VIH D+K N+ L+D+M + DFG+A E +
Sbjct: 132 MRQTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCG 188
Query: 425 TIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDW-LPIS 483
T Y+APE + S D++S G +L +GK P + +E ++ N++ +P
Sbjct: 189 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH 248
Query: 484 IMEVIDANLLSREDIH 499
I V A+ L R +H
Sbjct: 249 INPV--ASALIRRMLH 262
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
++ ALEY+H S V++ DIK N++LD + ++DFG+ K G T T
Sbjct: 116 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP 172
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D + G+++ + G+ P
Sbjct: 173 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 74/148 (50%), Gaps = 15/148 (10%)
Query: 335 LILEYKPHGSLEKYLYS---------GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIH 385
+++E HG L+ YL S G + + + ++A + Y++ + +H
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 153
Query: 386 CDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQT--QTLATIGYMAPEYGREGRVSANG 443
D+ A N ++ + + DFG+ + + + + + L + +MAPE ++G + +
Sbjct: 154 RDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSS 213
Query: 444 DVYSFGIMLMK-TFIGKKPTDEIFNEEM 470
D++SFG++L + T + ++P + NE++
Sbjct: 214 DMWSFGVVLWEITSLAEQPYQGLSNEQV 241
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 72/148 (48%), Gaps = 15/148 (10%)
Query: 335 LILEYKPHGSLEKYLYS---------GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIH 385
+++E HG L+ YL S G + + + ++A + Y++ + +H
Sbjct: 96 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 152
Query: 386 CDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPEYGREGRVSANG 443
D+ A N ++ + + DFG+ + D + L + +MAPE ++G + +
Sbjct: 153 RDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSS 212
Query: 444 DVYSFGIMLMK-TFIGKKPTDEIFNEEM 470
D++SFG++L + T + ++P + NE++
Sbjct: 213 DMWSFGVVLWEITSLAEQPYQGLSNEQV 240
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LILEY P G++ + L + D + + ++A AL Y H S VIH DIK N+L
Sbjct: 89 LILEYAPLGTVYRELQKLS-RFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 144
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLM 453
L N ++DFG + S + T+ Y+ PE EGR+ D++S G++
Sbjct: 145 LGSNGELKIADFGWSVHAP--SSRRDTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCY 201
Query: 454 KTFIGKKP 461
+ +G P
Sbjct: 202 EFLVGMPP 209
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 7/140 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
L++E G L K+L + + + V++ ++Y+ +H D+ A NVL
Sbjct: 86 LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVL 142
Query: 395 LDDNMVAHLSDFGIAKT-GEDQSMTQTQTLAT--IGYMAPEYGREGRVSANGDVYSFGIM 451
L + A +SDFG++K G D S ++ + + APE + S+ DV+S+G+
Sbjct: 143 LVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVT 202
Query: 452 LMKTF-IGKKPTDEIFNEEM 470
+ + G+KP ++ E+
Sbjct: 203 MWEALSYGQKPYKKMKGPEV 222
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 22/190 (11%)
Query: 274 SIHHASWKNALLLRTVLPLRTIFMIVVILLI-LRCRKRGKRPSNDANISPVATSCSNEEF 332
++ WK L V L+ M V L K K P N+ + C+ E
Sbjct: 33 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP----NLVQLLGVCTREPP 88
Query: 333 KALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMI------DVALALEYMHFGYSAPVIHC 386
+I+E+ +G+L YL N Q +N+++ ++ A+EY+ IH
Sbjct: 89 FYIIIEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKNFIHR 140
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGD 444
D+ A N L+ +N + ++DFG+++ TG D I + APE + S D
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 445 VYSFGIMLMK 454
V++FG++L +
Sbjct: 200 VWAFGVLLWE 209
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 12/150 (8%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDI---FQRLNSMIDVALALEY- 374
NI + +C++ +I EY +G L +L + L+ F NS + L +
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFS 170
Query: 375 ------MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATI 426
M F S IH D+ A NVLL + VA + DFG+A+ + + + +
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTF 456
+MAPE + + DV+S+GI+L + F
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIF 260
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 331 EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM---HFGYSAPVIHCD 387
+ K+ + E +P S SL + L+ D+A +Y+ HF IH D
Sbjct: 111 DLKSFLRETRPRPSQPS-------SLAMLDLLHVARDIACGCQYLEENHF------IHRD 157
Query: 388 IKANNVLLD---DNMVAHLSDFGIAKTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSAN 442
I A N LL VA + DFG+A+ S + A + +M PE EG ++
Sbjct: 158 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 217
Query: 443 GDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
D +SFG++L + F +G P N+E+
Sbjct: 218 TDTWSFGVLLWEIFSLGYMPYPSKSNQEV 246
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 21/167 (12%)
Query: 368 VALA-LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
V LA L+ + ++ VIH DIK++++LL + LSDFG + + + T
Sbjct: 125 VCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTP 184
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIME 486
+MAPE D++S GIM+++ G+ P FNE P+ M+
Sbjct: 185 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP---YFNEP-----------PLKAMK 230
Query: 487 VIDANLLSR-EDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIV 532
+I NL R +++H V+ F+ L V P QR E++
Sbjct: 231 MIRDNLPPRLKNLHKVSP-SLKGFLDRL----LVRDPAQRATAAELL 272
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 331 EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM---HFGYSAPVIHCD 387
+ K+ + E +P S SL + L+ D+A +Y+ HF IH D
Sbjct: 119 DLKSFLRETRPRPSQPS-------SLAMLDLLHVARDIACGCQYLEENHF------IHRD 165
Query: 388 IKANNVLLD---DNMVAHLSDFGIAKTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSAN 442
I A N LL VA + DFG+A+ S + A + +M PE EG ++
Sbjct: 166 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 225
Query: 443 GDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
D +SFG++L + F +G P N+E+
Sbjct: 226 TDTWSFGVLLWEIFSLGYMPYPSKSNQEV 254
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 331 EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM---HFGYSAPVIHCD 387
+ K+ + E +P S SL + L+ D+A +Y+ HF IH D
Sbjct: 119 DLKSFLRETRPRPSQPS-------SLAMLDLLHVARDIACGCQYLEENHF------IHRD 165
Query: 388 IKANNVLLD---DNMVAHLSDFGIAKTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSAN 442
I A N LL VA + DFG+A+ S + A + +M PE EG ++
Sbjct: 166 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 225
Query: 443 GDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
D +SFG++L + F +G P N+E+
Sbjct: 226 TDTWSFGVLLWEIFSLGYMPYPSKSNQEV 254
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 21/167 (12%)
Query: 368 VALA-LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
V LA L+ + ++ VIH DIK++++LL + LSDFG + + + T
Sbjct: 130 VCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTP 189
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIME 486
+MAPE D++S GIM+++ G+ P FNE P+ M+
Sbjct: 190 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP---YFNEP-----------PLKAMK 235
Query: 487 VIDANLLSR-EDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIV 532
+I NL R +++H V+ F+ L V P QR E++
Sbjct: 236 MIRDNLPPRLKNLHKVSPS-LKGFLDRL----LVRDPAQRATAAELL 277
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 21/167 (12%)
Query: 368 VALA-LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
V LA L+ + ++ VIH DIK++++LL + LSDFG + + + T
Sbjct: 121 VCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTP 180
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIME 486
+MAPE D++S GIM+++ G+ P FNE P+ M+
Sbjct: 181 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP---YFNEP-----------PLKAMK 226
Query: 487 VIDANLLSR-EDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIV 532
+I NL R +++H V+ F+ L V P QR E++
Sbjct: 227 MIRDNLPPRLKNLHKVSP-SLKGFLDRL----LVRDPAQRATAAELL 268
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLAT 425
VA +E++ F +H D+ A NVL+ V + DFG+A+ + + +
Sbjct: 181 VAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLP 237
Query: 426 IGYMAPEYGREGRVSANGDVYSFGIMLMKTF-IGKKP 461
+ +MAPE EG + DV+S+GI+L + F +G P
Sbjct: 238 VKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 274
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 9/101 (8%)
Query: 365 MIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA 424
+ ++ +AL+Y+ + +IH D+K +N+LLD++ H++DF IA + TQ T+A
Sbjct: 121 ICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE--TQITTMA 175
Query: 425 -TIGYMAPEY--GREGR-VSANGDVYSFGIMLMKTFIGKKP 461
T YMAPE R+G S D +S G+ + G++P
Sbjct: 176 GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 98/209 (46%), Gaps = 32/209 (15%)
Query: 334 ALILEYKPHGSLEKYLY-SGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392
++ +E+ GSL++ L +G I +++ I V L Y+ + ++H D+K +N
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVS--IAVIKGLTYLREKHK--IMHRDVKPSN 135
Query: 393 VLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+L++ L DFG+ +G+ + T YM+PE + S D++S G+ L
Sbjct: 136 ILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 193
Query: 453 MKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKE---QFMSF 509
++ +G+ P +E + P++I E++D ++ E + S
Sbjct: 194 VEMAVGRYPIPPPDAKE-------DSRPPMAIFELLD----------YIVNEPPPKLPSG 236
Query: 510 VFNLAME-----CTVESPEQRINPKEIVT 533
VF+L + C +++P +R + K+++
Sbjct: 237 VFSLEFQDFVNKCLIKNPAERADLKQLMV 265
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
++Y+H + VIH D+K N+ L+D+M + DFG+A E + T Y+A
Sbjct: 154 GVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIA 210
Query: 431 PEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDW-LPISIMEVID 489
PE + S D++S G +L +GK P + +E ++ N++ +P I V
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPV-- 268
Query: 490 ANLLSREDIH 499
A+ L R +H
Sbjct: 269 ASALIRRMLH 278
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 365 MIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA 424
M ++Y+H + VIH D+K N+ L+D+M + DFG+A E +
Sbjct: 148 MRQTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCG 204
Query: 425 TIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDW-LPIS 483
T Y+APE + S D++S G +L +GK P + +E ++ N++ +P
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH 264
Query: 484 IMEVIDANLLSREDIH 499
I V A+ L R +H
Sbjct: 265 INPV--ASALIRRMLH 278
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 21/167 (12%)
Query: 368 VALA-LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
V LA L+ + ++ VIH DIK++++LL + LSDFG + + + T
Sbjct: 132 VCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTP 191
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIME 486
+MAPE D++S GIM+++ G+ P FNE P+ M+
Sbjct: 192 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP---YFNEP-----------PLKAMK 237
Query: 487 VIDANLLSR-EDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIV 532
+I NL R +++H V+ F+ L V P QR E++
Sbjct: 238 MIRDNLPPRLKNLHKVSPS-LKGFLDRL----LVRDPAQRATAAELL 279
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 331 EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM---HFGYSAPVIHCD 387
+ K+ + E +P S SL + L+ D+A +Y+ HF IH D
Sbjct: 134 DLKSFLRETRPRPSQPS-------SLAMLDLLHVARDIACGCQYLEENHF------IHRD 180
Query: 388 IKANNVLLD---DNMVAHLSDFGIAKTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSAN 442
I A N LL VA + DFG+A+ S + A + +M PE EG ++
Sbjct: 181 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 240
Query: 443 GDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
D +SFG++L + F +G P N+E+
Sbjct: 241 TDTWSFGVLLWEIFSLGYMPYPSKSNQEV 269
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 331 EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM---HFGYSAPVIHCD 387
+ K+ + E +P S SL + L+ D+A +Y+ HF IH D
Sbjct: 134 DLKSFLRETRPRPSQPS-------SLAMLDLLHVARDIACGCQYLEENHF------IHRD 180
Query: 388 IKANNVLLD---DNMVAHLSDFGIAKTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSAN 442
I A N LL VA + DFG+A+ S + A + +M PE EG ++
Sbjct: 181 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 240
Query: 443 GDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
D +SFG++L + F +G P N+E+
Sbjct: 241 TDTWSFGVLLWEIFSLGYMPYPSKSNQEV 269
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 365 MIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA 424
M ++Y+H + VIH D+K N+ L+D+M + DFG+A E +
Sbjct: 148 MRQTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCG 204
Query: 425 TIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDW-LPIS 483
T Y+APE + S D++S G +L +GK P + +E ++ N++ +P
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH 264
Query: 484 IMEVIDANLLSREDIH 499
I V A+ L R +H
Sbjct: 265 INPV--ASALIRRMLH 278
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 331 EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM---HFGYSAPVIHCD 387
+ K+ + E +P S SL + L+ D+A +Y+ HF IH D
Sbjct: 120 DLKSFLRETRPRPSQPS-------SLAMLDLLHVARDIACGCQYLEENHF------IHRD 166
Query: 388 IKANNVLLD---DNMVAHLSDFGIAKTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSAN 442
I A N LL VA + DFG+A+ S + A + +M PE EG ++
Sbjct: 167 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 226
Query: 443 GDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
D +SFG++L + F +G P N+E+
Sbjct: 227 TDTWSFGVLLWEIFSLGYMPYPSKSNQEV 255
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 331 EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM---HFGYSAPVIHCD 387
+ K+ + E +P S SL + L+ D+A +Y+ HF IH D
Sbjct: 126 DLKSFLRETRPRPSQPS-------SLAMLDLLHVARDIACGCQYLEENHF------IHRD 172
Query: 388 IKANNVLLD---DNMVAHLSDFGIAKTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSAN 442
I A N LL VA + DFG+A+ S + A + +M PE EG ++
Sbjct: 173 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 232
Query: 443 GDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
D +SFG++L + F +G P N+E+
Sbjct: 233 TDTWSFGVLLWEIFSLGYMPYPSKSNQEV 261
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 331 EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM---HFGYSAPVIHCD 387
+ K+ + E +P S SL + L+ D+A +Y+ HF IH D
Sbjct: 134 DLKSFLRETRPRPSQPS-------SLAMLDLLHVARDIACGCQYLEENHF------IHRD 180
Query: 388 IKANNVLLD---DNMVAHLSDFGIAKTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSAN 442
I A N LL VA + DFG+A+ S + A + +M PE EG ++
Sbjct: 181 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 240
Query: 443 GDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
D +SFG++L + F +G P N+E+
Sbjct: 241 TDTWSFGVLLWEIFSLGYMPYPSKSNQEV 269
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 35/201 (17%)
Query: 335 LILEYKPHGSLEKYLYSG-------NCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCD 387
+IL + HG L +L + N L R M+D+A +EY+ S IH D
Sbjct: 108 VILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF--MVDIACGMEYLS---SRNFIHRD 162
Query: 388 IKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDV 445
+ A N +L ++M ++DFG+++ D + + ++A E + + + DV
Sbjct: 163 LAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDV 222
Query: 446 YSFGIMLMKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKE 504
++FG+ + + G+ P I N E + ++L I N L +
Sbjct: 223 WAFGVTMWEIMTRGQTPYAGIENAE------IYNYL-------IGGNRLKQ-------PP 262
Query: 505 QFMSFVFNLAMECTVESPEQR 525
+ M V++L +C P+QR
Sbjct: 263 ECMEEVYDLMYQCWSADPKQR 283
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 331 EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM---HFGYSAPVIHCD 387
+ K+ + E +P S SL + L+ D+A +Y+ HF IH D
Sbjct: 120 DLKSFLRETRPRPSQPS-------SLAMLDLLHVARDIACGCQYLEENHF------IHRD 166
Query: 388 IKANNVLLD---DNMVAHLSDFGIAKTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSAN 442
I A N LL VA + DFG+A+ S + A + +M PE EG ++
Sbjct: 167 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 226
Query: 443 GDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
D +SFG++L + F +G P N+E+
Sbjct: 227 TDTWSFGVLLWEIFSLGYMPYPSKSNQEV 255
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 331 EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM---HFGYSAPVIHCD 387
+ K+ + E +P S SL + L+ D+A +Y+ HF IH D
Sbjct: 136 DLKSFLRETRPRPSQPS-------SLAMLDLLHVARDIACGCQYLEENHF------IHRD 182
Query: 388 IKANNVLLD---DNMVAHLSDFGIAKTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSAN 442
I A N LL VA + DFG+A+ S + A + +M PE EG ++
Sbjct: 183 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 242
Query: 443 GDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
D +SFG++L + F +G P N+E+
Sbjct: 243 TDTWSFGVLLWEIFSLGYMPYPSKSNQEV 271
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 21/167 (12%)
Query: 368 VALA-LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
V LA L+ + ++ VIH DIK++++LL + LSDFG + + + T
Sbjct: 175 VCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTP 234
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIME 486
+MAPE D++S GIM+++ G+ P FNE P+ M+
Sbjct: 235 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP---YFNEP-----------PLKAMK 280
Query: 487 VIDANLLSR-EDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIV 532
+I NL R +++H V+ F+ L V P QR E++
Sbjct: 281 MIRDNLPPRLKNLHKVSPS-LKGFLDRL----LVRDPAQRATAAELL 322
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 22/190 (11%)
Query: 274 SIHHASWKNALLLRTVLPLRTIFMIVVILLI-LRCRKRGKRPSNDANISPVATSCSNEEF 332
++ WK L V L+ M V L K K P N+ + C+ E
Sbjct: 41 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP----NLVQLLGVCTREPP 96
Query: 333 KALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMI------DVALALEYMHFGYSAPVIHC 386
+I E+ +G+L YL N Q +N+++ ++ A+EY+ IH
Sbjct: 97 FYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKNFIHR 148
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGD 444
D+ A N L+ +N + ++DFG+++ TG D I + APE + S D
Sbjct: 149 DLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 207
Query: 445 VYSFGIMLMK 454
V++FG++L +
Sbjct: 208 VWAFGVLLWE 217
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 8/140 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
L+ + PHG L +Y++ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 116 LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVL 172
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG+A+ G+++ I +MA E + + DV+S+G+ +
Sbjct: 173 VKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTI 232
Query: 453 MK--TFIGKKPTDEIFNEEM 470
+ TF G KP D I E+
Sbjct: 233 WELMTF-GGKPYDGIPTREI 251
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 25/105 (23%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIA---KTGEDQSMTQTQTLATIGY 428
LE + F ++ ++H D+K N+LLDDNM LSDFG + + GE + T GY
Sbjct: 210 LEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE----KLRELCGTPGY 265
Query: 429 MAPE------------YGREGRVSANGDVYSFGIMLMKTFIGKKP 461
+APE YG+E D+++ G++L G P
Sbjct: 266 LAPEILKCSMDETHPGYGKE------VDLWACGVILFTLLAGSPP 304
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 8/132 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY G L Y+ C + + + L + + + V+H D+K NVL
Sbjct: 88 MVMEYVSGGELFDYI----CKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVL 143
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG--DVYSFGIML 452
LD +M A ++DFG++ D +T + + Y APE GR+ A D++S G++L
Sbjct: 144 LDAHMNAKIADFGLSNMMSDGEFLRT-SCGSPNYAAPEV-ISGRLYAGPEVDIWSCGVIL 201
Query: 453 MKTFIGKKPTDE 464
G P D+
Sbjct: 202 YALLCGTLPFDD 213
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 3/129 (2%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
L+LE +G + +YL + + + M + + Y+H S ++H D+ +N+L
Sbjct: 88 LVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLL 144
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
L NM ++DFG+A + T Y++PE DV+S G M
Sbjct: 145 LTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYT 204
Query: 455 TFIGKKPTD 463
IG+ P D
Sbjct: 205 LLIGRPPFD 213
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 331 EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM---HFGYSAPVIHCD 387
+ K+ + E +P S SL + L+ D+A +Y+ HF IH D
Sbjct: 146 DLKSFLRETRPRPSQPS-------SLAMLDLLHVARDIACGCQYLEENHF------IHRD 192
Query: 388 IKANNVLLD---DNMVAHLSDFGIAKTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSAN 442
I A N LL VA + DFG+A+ S + A + +M PE EG ++
Sbjct: 193 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 252
Query: 443 GDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
D +SFG++L + F +G P N+E+
Sbjct: 253 TDTWSFGVLLWEIFSLGYMPYPSKSNQEV 281
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 12/122 (9%)
Query: 347 KYLYSGNCSLD--IFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLS 404
KY+YS LD I + + I +A H + +IH DIK +N+LLD + L
Sbjct: 112 KYVYS---VLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLC 168
Query: 405 DFGIAKTGEDQSMTQTQTLATIGYMAPEY-----GREGRVSANGDVYSFGIMLMKTFIGK 459
DFGI+ D S+ +T+ YMAPE R+G DV+S GI L + G+
Sbjct: 169 DFGISGQLVD-SIAKTRDAGCRPYMAPERIDPSASRQG-YDVRSDVWSLGITLYELATGR 226
Query: 460 KP 461
P
Sbjct: 227 FP 228
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 21/167 (12%)
Query: 368 VALA-LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
V LA L+ + ++ VIH DIK++++LL + LSDFG + + + T
Sbjct: 252 VCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTP 311
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIME 486
+MAPE D++S GIM+++ G+ P FNE P+ M+
Sbjct: 312 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP---YFNEP-----------PLKAMK 357
Query: 487 VIDANLLSR-EDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIV 532
+I NL R +++H V+ F+ L V P QR E++
Sbjct: 358 MIRDNLPPRLKNLHKVSPS-LKGFLDRL----LVRDPAQRATAAELL 399
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCS-LDIFQRLNSMIDVALALEYMHFGYSAPVIH 385
C+ E ++ EY P+G+L YL N + L ++ A+EY+ IH
Sbjct: 97 CTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE---KKNFIH 153
Query: 386 CDIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANG 443
D+ A N L+ +N V ++DFG+++ TG D I + APE S
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNTFSIKS 212
Query: 444 DVYSFGIMLMK 454
DV++FG++L +
Sbjct: 213 DVWAFGVLLWE 223
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 22/190 (11%)
Query: 274 SIHHASWKNALLLRTVLPLRTIFMIVVILLI-LRCRKRGKRPSNDANISPVATSCSNEEF 332
++ WK L V L+ M V L K K P N+ + C+ E
Sbjct: 33 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP----NLVQLLGVCTREPP 88
Query: 333 KALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMI------DVALALEYMHFGYSAPVIHC 386
+I E+ +G+L YL N Q +N+++ ++ A+EY+ IH
Sbjct: 89 FYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKNFIHR 140
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGD 444
D+ A N L+ +N + ++DFG+++ TG D I + APE + S D
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 445 VYSFGIMLMK 454
V++FG++L +
Sbjct: 200 VWAFGVLLWE 209
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 14/152 (9%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYL---------YSGNCSLDIFQRLNSMIDVA 369
NI + +C++ +I EY +G L +L YS N S + ++L+S +
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLH 170
Query: 370 LALEY---MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLA 424
+ + M F S IH D+ A NVLL + VA + DFG+A+ + + +
Sbjct: 171 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 230
Query: 425 TIGYMAPEYGREGRVSANGDVYSFGIMLMKTF 456
+ +MAPE + + DV+S+GI+L + F
Sbjct: 231 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 262
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 331 EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM---HFGYSAPVIHCD 387
+ K+ + E +P S SL + L+ D+A +Y+ HF IH D
Sbjct: 120 DLKSFLRETRPRPSQPS-------SLAMLDLLHVARDIACGCQYLEENHF------IHRD 166
Query: 388 IKANNVLLD---DNMVAHLSDFGIAKTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSAN 442
I A N LL VA + DFG+A+ S + A + +M PE EG ++
Sbjct: 167 IAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 226
Query: 443 GDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
D +SFG++L + F +G P N+E+
Sbjct: 227 TDTWSFGVLLWEIFSLGYMPYPSKSNQEV 255
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 8/140 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
L+ + PHG L +Y++ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 93 LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVL 149
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG+A+ G+++ I +MA E + + DV+S+G+ +
Sbjct: 150 VKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTI 209
Query: 453 MK--TFIGKKPTDEIFNEEM 470
+ TF G KP D I E+
Sbjct: 210 WELMTF-GGKPYDGIPTREI 228
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 70/144 (48%), Gaps = 11/144 (7%)
Query: 335 LILEYKPHGSLEKYLY-----SGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIK 389
+IL + +G L YL +G + + L M+D+AL +EY+ + +H D+
Sbjct: 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLA 174
Query: 390 ANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLAT--IGYMAPEYGREGRVSANGDVYS 447
A N +L D+M ++DFG++K + +A + ++A E + ++ DV++
Sbjct: 175 ARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWA 234
Query: 448 FGIMLMKTFI-GKKPTDEIFNEEM 470
FG+ + + G P + N EM
Sbjct: 235 FGVTMWEIATRGMTPYPGVQNHEM 258
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPE 432
M F S IH D+ A NVLL + VA + DFG+A+ + + + + +MAPE
Sbjct: 165 MAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPE 224
Query: 433 YGREGRVSANGDVYSFGIMLMKTF 456
+ + DV+S+GI+L + F
Sbjct: 225 SIFDCVYTVQSDVWSYGILLWEIF 248
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 22/190 (11%)
Query: 274 SIHHASWKNALLLRTVLPLRTIFMIVVILLI-LRCRKRGKRPSNDANISPVATSCSNEEF 332
++ WK L V L+ M V L K K P N+ + C+ E
Sbjct: 30 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP----NLVQLLGVCTREPP 85
Query: 333 KALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMI------DVALALEYMHFGYSAPVIHC 386
+I E+ +G+L YL N Q +N+++ ++ A+EY+ IH
Sbjct: 86 FYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKNFIHR 137
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGD 444
D+ A N L+ +N + ++DFG+++ TG D I + APE + S D
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 445 VYSFGIMLMK 454
V++FG++L +
Sbjct: 197 VWAFGVLLWE 206
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 22/190 (11%)
Query: 274 SIHHASWKNALLLRTVLPLRTIFMIVVILLI-LRCRKRGKRPSNDANISPVATSCSNEEF 332
++ WK L V L+ M V L K K P N+ + C+ E
Sbjct: 30 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP----NLVQLLGVCTREPP 85
Query: 333 KALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMI------DVALALEYMHFGYSAPVIHC 386
+I E+ +G+L YL N Q +N+++ ++ A+EY+ IH
Sbjct: 86 FYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKNFIHR 137
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGD 444
D+ A N L+ +N + ++DFG+++ TG D I + APE + S D
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 445 VYSFGIMLMK 454
V++FG++L +
Sbjct: 197 VWAFGVLLWE 206
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 96/209 (45%), Gaps = 42/209 (20%)
Query: 334 ALILEYKPHGSLEKYLY-SGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392
++ +E+ GSL++ L +G I +++ I V L Y+ + ++H D+K +N
Sbjct: 83 SICMEHMDGGSLDQVLKKAGRIPEQILGKVS--IAVIKGLTYLREKHK--IMHRDVKPSN 138
Query: 393 VLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+L++ L DFG+ +G+ + + T YM+PE + S D++S G+ L
Sbjct: 139 ILVNSRGEIKLCDFGV--SGQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 196
Query: 453 MKTFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKE---QFMSF 509
++ +G+ P P++I E++D ++ E + S
Sbjct: 197 VEMAVGRYPRP-----------------PMAIFELLD----------YIVNEPPPKLPSA 229
Query: 510 VFNLAME-----CTVESPEQRINPKEIVT 533
VF+L + C +++P +R + K+++
Sbjct: 230 VFSLEFQDFVNKCLIKNPAERADLKQLMV 258
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 22/190 (11%)
Query: 274 SIHHASWKNALLLRTVLPLRTIFMIVVILLI-LRCRKRGKRPSNDANISPVATSCSNEEF 332
++ WK L V L+ M V L K K P N+ + C+ E
Sbjct: 33 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP----NLVQLLGVCTREPP 88
Query: 333 KALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMI------DVALALEYMHFGYSAPVIHC 386
+I E+ +G+L YL N Q +N+++ ++ A+EY+ IH
Sbjct: 89 FYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKNFIHR 140
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGD 444
D+ A N L+ +N + ++DFG+++ TG D I + APE + S D
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 445 VYSFGIMLMK 454
V++FG++L +
Sbjct: 200 VWAFGVLLWE 209
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDI---FQRLNSMIDVALALEY- 374
NI + +C++ +I EY +G L +L + L+ F NS L +
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFS 170
Query: 375 ------MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATI 426
M F S IH D+ A NVLL + VA + DFG+A+ + + + +
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTF 456
+MAPE + + DV+S+GI+L + F
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIF 260
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 12/159 (7%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
++LEY P G L Y+ S + L + + A+ Y+H S H D+K N+L
Sbjct: 85 MVLEYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLL 140
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TIGYMAPEYGR-EGRVSANGDVYSFGIML 452
D+ L DFG+ + QT ++ Y APE + + + + DV+S GI+L
Sbjct: 141 FDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILL 200
Query: 453 MKTFIGKKPTDE-----IFNEEMTLKHWVNDWL-PISIM 485
G P D+ ++ + M K+ V WL P SI+
Sbjct: 201 YVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSIL 239
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 22/190 (11%)
Query: 274 SIHHASWKNALLLRTVLPLRTIFMIVVILLI-LRCRKRGKRPSNDANISPVATSCSNEEF 332
++ WK L V L+ M V L K K P N+ + C+ E
Sbjct: 28 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP----NLVQLLGVCTREPP 83
Query: 333 KALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMI------DVALALEYMHFGYSAPVIHC 386
+I E+ +G+L YL N Q +N+++ ++ A+EY+ IH
Sbjct: 84 FYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKNFIHR 135
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGD 444
D+ A N L+ +N + ++DFG+++ TG D I + APE + S D
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 445 VYSFGIMLMK 454
V++FG++L +
Sbjct: 195 VWAFGVLLWE 204
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPE 432
M F S IH D+ A NVLL + VA + DFG+A+ + + + + +MAPE
Sbjct: 171 MAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPE 230
Query: 433 YGREGRVSANGDVYSFGIMLMKTF 456
+ + DV+S+GI+L + F
Sbjct: 231 SIFDCVYTVQSDVWSYGILLWEIF 254
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 22/190 (11%)
Query: 274 SIHHASWKNALLLRTVLPLRTIFMIVVILLI-LRCRKRGKRPSNDANISPVATSCSNEEF 332
++ WK L V L+ M V L K K P N+ + C+ E
Sbjct: 28 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP----NLVQLLGVCTREPP 83
Query: 333 KALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMI------DVALALEYMHFGYSAPVIHC 386
+I E+ +G+L YL N Q +N+++ ++ A+EY+ IH
Sbjct: 84 FYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKNFIHR 135
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGD 444
D+ A N L+ +N + ++DFG+++ TG D I + APE + S D
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 445 VYSFGIMLMK 454
V++FG++L +
Sbjct: 195 VWAFGVLLWE 204
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPE 432
M F S IH D+ A NVLL + VA + DFG+A+ + + + + +MAPE
Sbjct: 173 MAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPE 232
Query: 433 YGREGRVSANGDVYSFGIMLMKTF 456
+ + DV+S+GI+L + F
Sbjct: 233 SIFDCVYTVQSDVWSYGILLWEIF 256
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 22/190 (11%)
Query: 274 SIHHASWKNALLLRTVLPLRTIFMIVVILLI-LRCRKRGKRPSNDANISPVATSCSNEEF 332
++ WK L V L+ M V L K K P N+ + C+ E
Sbjct: 33 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP----NLVQLLGVCTREPP 88
Query: 333 KALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMI------DVALALEYMHFGYSAPVIHC 386
+I E+ +G+L YL N Q +N+++ ++ A+EY+ IH
Sbjct: 89 FYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKNFIHR 140
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGD 444
D+ A N L+ +N + ++DFG+++ TG D I + APE + S D
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 445 VYSFGIMLMK 454
V++FG++L +
Sbjct: 200 VWAFGVLLWE 209
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 22/190 (11%)
Query: 274 SIHHASWKNALLLRTVLPLRTIFMIVVILLI-LRCRKRGKRPSNDANISPVATSCSNEEF 332
++ WK L V L+ M V L K K P N+ + C+ E
Sbjct: 32 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP----NLVQLLGVCTREPP 87
Query: 333 KALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMI------DVALALEYMHFGYSAPVIHC 386
+I E+ +G+L YL N Q +N+++ ++ A+EY+ IH
Sbjct: 88 FYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKNFIHR 139
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGD 444
D+ A N L+ +N + ++DFG+++ TG D I + APE + S D
Sbjct: 140 DLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 198
Query: 445 VYSFGIMLMK 454
V++FG++L +
Sbjct: 199 VWAFGVLLWE 208
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 12/184 (6%)
Query: 275 IHHASWKNALLLRTVLPLRTIFMIVVILLI-LRCRKRGKRPSNDANISPVATSCSNEEFK 333
++ WK L V L+ M V L K K P N+ + C+ E
Sbjct: 27 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP----NLVQLLGVCTREPPF 82
Query: 334 ALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392
+I+E+ +G+L YL N + L ++ A+EY+ IH D+ A N
Sbjct: 83 YIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARN 139
Query: 393 VLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGI 450
L+ +N + ++DFG+++ TG D I + APE + S DV++FG+
Sbjct: 140 CLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 198
Query: 451 MLMK 454
+L +
Sbjct: 199 LLWE 202
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 100/233 (42%), Gaps = 32/233 (13%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFG------YSAPVIHCDI 388
L++EY P+GSL KYL RL + LA Y+H Y + H D+
Sbjct: 89 LVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLA--YLHTELPRGDHYKPAISHRDL 146
Query: 389 KANNVLLDDNMVAHLSDFGIA---------KTGEDQSMTQTQTLATIGYMAPEYGREGRV 439
+ NVL+ ++ +SDFG++ + GE+ + ++ + TI YMAPE EG V
Sbjct: 147 NSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE-VGTIRYMAPEV-LEGAV 204
Query: 440 SANG--------DVYSFGIMLMKTFIGKK---PTDEIFNEEMTLKHWVNDWLPISIMEVI 488
+ D+Y+ G++ + F+ P + + +M + V + M+V+
Sbjct: 205 NLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVL 264
Query: 489 DANLLSREDIHFVAKEQFMSF--VFNLAMECTVESPEQRINPKEIVTRLLKII 539
+ R KE ++ + +C + E R+ + R+ +++
Sbjct: 265 VSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM 317
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 20/138 (14%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLD------IFQRLNSMIDVALALEYMHFGYSAPVIHCDI 388
+++EY G L Y+ N LD +FQ++ S +D + + V+H D+
Sbjct: 93 MVMEYVSGGELFDYI-CKNGRLDEKESRRLFQQILSGVD---------YCHRHMVVHRDL 142
Query: 389 KANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG--DVY 446
K NVLLD +M A ++DFG++ D + + + Y APE GR+ A D++
Sbjct: 143 KPENVLLDAHMNAKIADFGLSNMMSDGEFLRX-SCGSPNYAAPEVI-SGRLYAGPEVDIW 200
Query: 447 SFGIMLMKTFIGKKPTDE 464
S G++L G P D+
Sbjct: 201 SSGVILYALLCGTLPFDD 218
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 72/148 (48%), Gaps = 15/148 (10%)
Query: 335 LILEYKPHGSLEKYLYS---------GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIH 385
+++E HG L+ YL S G + + + ++A + Y++ + +H
Sbjct: 98 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 154
Query: 386 CDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPEYGREGRVSANG 443
++ A N ++ + + DFG+ + D + L + +MAPE ++G + +
Sbjct: 155 RNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSS 214
Query: 444 DVYSFGIMLMK-TFIGKKPTDEIFNEEM 470
D++SFG++L + T + ++P + NE++
Sbjct: 215 DMWSFGVVLWEITSLAEQPYQGLSNEQV 242
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 22/190 (11%)
Query: 274 SIHHASWKNALLLRTVLPLRTIFMIVVILLI-LRCRKRGKRPSNDANISPVATSCSNEEF 332
++ WK L V L+ M V L K K P N+ + C+ E
Sbjct: 29 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP----NLVQLLGVCTREPP 84
Query: 333 KALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMI------DVALALEYMHFGYSAPVIHC 386
+I E+ +G+L YL N Q +N+++ ++ A+EY+ IH
Sbjct: 85 FYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKNFIHR 136
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGD 444
D+ A N L+ +N + ++DFG+++ TG D I + APE + S D
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYNKFSIKSD 195
Query: 445 VYSFGIMLMK 454
V++FG++L +
Sbjct: 196 VWAFGVLLWE 205
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
D+ +EY+H+ +IH DIK +N+L+ ++ ++DFG++ + + T+ T
Sbjct: 145 DLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTP 201
Query: 427 GYMAPEYGREGRVSANG---DVYSFGIMLMKTFIGKKP 461
+MAPE E R +G DV++ G+ L G+ P
Sbjct: 202 AFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 72/148 (48%), Gaps = 15/148 (10%)
Query: 335 LILEYKPHGSLEKYLYS---------GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIH 385
+++E HG L+ YL S G + + + ++A + Y++ + +H
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 153
Query: 386 CDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPEYGREGRVSANG 443
++ A N ++ + + DFG+ + D + L + +MAPE ++G + +
Sbjct: 154 RNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSS 213
Query: 444 DVYSFGIMLMK-TFIGKKPTDEIFNEEM 470
D++SFG++L + T + ++P + NE++
Sbjct: 214 DMWSFGVVLWEITSLAEQPYQGLSNEQV 241
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 22/190 (11%)
Query: 274 SIHHASWKNALLLRTVLPLRTIFMIVVILLI-LRCRKRGKRPSNDANISPVATSCSNEEF 332
++ WK L V L+ M V L K K P N+ + C+ E
Sbjct: 30 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP----NLVQLLGVCTREPP 85
Query: 333 KALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMI------DVALALEYMHFGYSAPVIHC 386
+I E+ +G+L YL N Q +N+++ ++ A+EY+ IH
Sbjct: 86 FYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKNFIHR 137
Query: 387 DIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGD 444
D+ A N L+ +N + ++DFG+++ TG D I + APE + S D
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 445 VYSFGIMLMK 454
V++FG++L +
Sbjct: 197 VWAFGVLLWE 206
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 12/185 (6%)
Query: 274 SIHHASWKNALLLRTVLPLRTIFMIVVILLI-LRCRKRGKRPSNDANISPVATSCSNEEF 332
++ WK L V L+ M V L K K P N+ + C+ E
Sbjct: 28 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP----NLVQLLGVCTREPP 83
Query: 333 KALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKAN 391
+I+E+ +G+L YL N + L ++ A+EY+ IH D+ A
Sbjct: 84 FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAAR 140
Query: 392 NVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFG 449
N L+ +N + ++DFG+++ TG D I + APE + S DV++FG
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 199
Query: 450 IMLMK 454
++L +
Sbjct: 200 VLLWE 204
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPE 432
M F S IH D+ A N+LL + V + DFG+A+ + + + + +MAPE
Sbjct: 161 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPE 220
Query: 433 YGREGRVSANGDVYSFGIMLMKTF-IGKKP 461
+ + DV+SFG++L + F +G P
Sbjct: 221 TIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 73/159 (45%), Gaps = 27/159 (16%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHF-------GYSAPVIHCD 387
LI + GSL +L + S + + + A L Y+H G+ + H D
Sbjct: 99 LITAFHEKGSLSDFLKANVVSWNELCHIAETM--ARGLAYLHEDIPGLKDGHKPAISHRD 156
Query: 388 IKANNVLLDDNMVAHLSDFGIA---KTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG- 443
IK+ NVLL +N+ A ++DFG+A + G+ T Q + T YMAPE EG ++
Sbjct: 157 IKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQ-VGTRRYMAPEV-LEGAINFQRD 214
Query: 444 -----DVYSFGIMLM----KTFIGKKPTDEI---FNEEM 470
D+Y+ G++L + P DE F EE+
Sbjct: 215 AFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI 253
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPE 432
M F S IH D+ A N+LL + V + DFG+A+ + + + + +MAPE
Sbjct: 152 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPE 211
Query: 433 YGREGRVSANGDVYSFGIMLMKTF-IGKKP 461
+ + DV+SFG++L + F +G P
Sbjct: 212 TIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPE 432
M F S IH D+ A N+LL + V + DFG+A+ + + + + +MAPE
Sbjct: 152 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPE 211
Query: 433 YGREGRVSANGDVYSFGIMLMKTF-IGKKP 461
+ + DV+SFG++L + F +G P
Sbjct: 212 TIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 12/185 (6%)
Query: 274 SIHHASWKNALLLRTVLPLRTIFMIVVILLI-LRCRKRGKRPSNDANISPVATSCSNEEF 332
++ WK L V L+ M V L K K P N+ + C+ E
Sbjct: 28 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP----NLVQLLGVCTREPP 83
Query: 333 KALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKAN 391
+I+E+ +G+L YL N + L ++ A+EY+ IH D+ A
Sbjct: 84 FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAAR 140
Query: 392 NVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFG 449
N L+ +N + ++DFG+++ TG D I + APE + S DV++FG
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 199
Query: 450 IMLMK 454
++L +
Sbjct: 200 VLLWE 204
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
V AL Y+H + VIH DIK++++LL + LSDFG + + T
Sbjct: 150 VLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPY 206
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
+MAPE + D++S GIM+++ G+ P
Sbjct: 207 WMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPE 432
M F S IH D+ A N+LL + V + DFG+A+ + + + + +MAPE
Sbjct: 161 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPE 220
Query: 433 YGREGRVSANGDVYSFGIMLMKTF-IGKKP 461
+ + DV+SFG++L + F +G P
Sbjct: 221 TIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 22/149 (14%)
Query: 331 EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM---HFGYSAPVIHCD 387
+ K+ + E +P S SL + L+ D+A +Y+ HF IH D
Sbjct: 160 DLKSFLRETRPRPSQPS-------SLAMLDLLHVARDIACGCQYLEENHF------IHRD 206
Query: 388 IKANNVLLD---DNMVAHLSDFGIAKTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSAN 442
I A N LL VA + DFG+A+ + A + +M PE EG ++
Sbjct: 207 IAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSK 266
Query: 443 GDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
D +SFG++L + F +G P N+E+
Sbjct: 267 TDTWSFGVLLWEIFSLGYMPYPSKSNQEV 295
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEY-----------MHFGYSAPV 383
+I+E+ G+L YL S ++ + D L LE+ M F S
Sbjct: 111 VIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDF-LTLEHLIXYSFQVAKGMEFLASRKX 169
Query: 384 IHCDIKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSA 441
IH D+ A N+LL + V + DFG+A+ + + + + +MAPE + +
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 442 NGDVYSFGIMLMKTF-IGKKP 461
DV+SFG++L + F +G P
Sbjct: 230 QSDVWSFGVLLWEIFSLGASP 250
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 22/149 (14%)
Query: 331 EFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM---HFGYSAPVIHCD 387
+ K+ + E +P S SL + L+ D+A +Y+ HF IH D
Sbjct: 137 DLKSFLRETRPRPSQPS-------SLAMLDLLHVARDIACGCQYLEENHF------IHRD 183
Query: 388 IKANNVLLD---DNMVAHLSDFGIAKTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSAN 442
I A N LL VA + DFG+A+ + A + +M PE EG ++
Sbjct: 184 IAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSK 243
Query: 443 GDVYSFGIMLMKTF-IGKKPTDEIFNEEM 470
D +SFG++L + F +G P N+E+
Sbjct: 244 TDTWSFGVLLWEIFSLGYMPYPSKSNQEV 272
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 11/138 (7%)
Query: 335 LILEYKPHGSLEKYLYSGNCSL----DIFQ---RLNSMIDVALAL-EYMHFGYSAPVIHC 386
+I+E+ G+L YL S D+++ L +I + + + M F S IH
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHR 168
Query: 387 DIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPEYGREGRVSANGD 444
D+ A N+LL + V + DFG+A+ + + + + +MAPE + + D
Sbjct: 169 DLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD 228
Query: 445 VYSFGIMLMKTF-IGKKP 461
V+SFG++L + F +G P
Sbjct: 229 VWSFGVLLWEIFSLGASP 246
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIA---KTGEDQSMTQTQT- 422
+V LEY+H IH D+KA N+LL ++ ++DFG++ TG D + + +
Sbjct: 129 EVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 185
Query: 423 -LATIGYMAPEYGREGR-VSANGDVYSFGIMLMKTFIGKKP 461
+ T +MAPE + R D++SFGI ++ G P
Sbjct: 186 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIA---KTGEDQSMTQTQT- 422
+V LEY+H IH D+KA N+LL ++ ++DFG++ TG D + + +
Sbjct: 124 EVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 180
Query: 423 -LATIGYMAPEYGREGR-VSANGDVYSFGIMLMKTFIGKKP 461
+ T +MAPE + R D++SFGI ++ G P
Sbjct: 181 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 7/140 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
L++E G L K+L + + + V++ ++Y+ +H ++ A NVL
Sbjct: 412 LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVL 468
Query: 395 LDDNMVAHLSDFGIAKT-GEDQSMTQTQTLAT--IGYMAPEYGREGRVSANGDVYSFGIM 451
L + A +SDFG++K G D S ++ + + APE + S+ DV+S+G+
Sbjct: 469 LVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVT 528
Query: 452 LMKTF-IGKKPTDEIFNEEM 470
+ + G+KP ++ E+
Sbjct: 529 MWEALSYGQKPYKKMKGPEV 548
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPE 432
M F S IH D+ A N+LL + V + DFG+A+ + + + + +MAPE
Sbjct: 161 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 220
Query: 433 YGREGRVSANGDVYSFGIMLMKTF-IGKKP 461
+ + DV+SFG++L + F +G P
Sbjct: 221 TIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 12/185 (6%)
Query: 274 SIHHASWKNALLLRTVLPLRTIFMIVVILLI-LRCRKRGKRPSNDANISPVATSCSNEEF 332
++ WK L V L+ M V L K K P N+ + C+ E
Sbjct: 26 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP----NLVQLLGVCTREPP 81
Query: 333 KALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKAN 391
+I E+ +G+L YL N + L ++ A+EY+ IH D+ A
Sbjct: 82 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAAR 138
Query: 392 NVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFG 449
N L+ +N + ++DFG+++ TG D I + APE + S DV++FG
Sbjct: 139 NCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 197
Query: 450 IMLMK 454
++L +
Sbjct: 198 VLLWE 202
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPE 432
M F S IH D+ A N+LL + V + DFG+A+ + + + + +MAPE
Sbjct: 152 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 211
Query: 433 YGREGRVSANGDVYSFGIMLMKTF-IGKKP 461
+ + DV+SFG++L + F +G P
Sbjct: 212 TIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPE 432
M F S IH D+ A N+LL + V + DFG+A+ + + + + +MAPE
Sbjct: 206 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 265
Query: 433 YGREGRVSANGDVYSFGIMLMKTF-IGKKP 461
+ + DV+SFG++L + F +G P
Sbjct: 266 TIFDRVYTIQSDVWSFGVLLWEIFSLGASP 295
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 384 IHCDIKANNVLLDDNMVAHLSDFGIA-KTGEDQSMTQTQTLATIGYMAPEY-----GREG 437
+H DIK +N+L+D N L+DFG K ED ++ + + T Y++PE G +G
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKG 256
Query: 438 RVSANGDVYSFGIMLMKTFIGKKP 461
R D +S G+ + + G+ P
Sbjct: 257 RYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPE 432
M F S IH D+ A N+LL + V + DFG+A+ + + + + +MAPE
Sbjct: 152 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 211
Query: 433 YGREGRVSANGDVYSFGIMLMKTF-IGKKP 461
+ + DV+SFG++L + F +G P
Sbjct: 212 TIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPE 432
M F S IH D+ A N+LL + V + DFG+A+ + + + + +MAPE
Sbjct: 198 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 257
Query: 433 YGREGRVSANGDVYSFGIMLMKTF-IGKKP 461
+ + DV+SFG++L + F +G P
Sbjct: 258 TIFDRVYTIQSDVWSFGVLLWEIFSLGASP 287
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPE 432
M F S IH D+ A N+LL + V + DFG+A+ + + + + +MAPE
Sbjct: 163 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 222
Query: 433 YGREGRVSANGDVYSFGIMLMKTF-IGKKP 461
+ + DV+SFG++L + F +G P
Sbjct: 223 TIFDRVYTIQSDVWSFGVLLWEIFSLGASP 252
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 12/185 (6%)
Query: 274 SIHHASWKNALLLRTVLPLRTIFMIVVILLI-LRCRKRGKRPSNDANISPVATSCSNEEF 332
++ WK L V L+ M V L K K P N+ + C+ E
Sbjct: 28 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP----NLVQLLGVCTREPP 83
Query: 333 KALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKAN 391
+I E+ +G+L YL N + L ++ A+EY+ IH D+ A
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAAR 140
Query: 392 NVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFG 449
N L+ +N + ++DFG+++ TG D I + APE + S DV++FG
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 199
Query: 450 IMLMK 454
++L +
Sbjct: 200 VLLWE 204
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 8/132 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY G L Y+ C + + + L + + + V+H D+K NVL
Sbjct: 88 MVMEYVSGGELFDYI----CKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVL 143
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG--DVYSFGIML 452
LD +M A ++DFG++ D + + + Y APE GR+ A D++S G++L
Sbjct: 144 LDAHMNAKIADFGLSNMMSDGEFLR-DSCGSPNYAAPEV-ISGRLYAGPEVDIWSCGVIL 201
Query: 453 MKTFIGKKPTDE 464
G P D+
Sbjct: 202 YALLCGTLPFDD 213
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 17/141 (12%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEY-----------MHFGYSAPV 383
+I+E+ G+L YL S + F + L LE+ M F S
Sbjct: 109 VIVEFCKFGNLSTYLRSKR---NEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKX 165
Query: 384 IHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPEYGREGRVSA 441
IH D+ A N+LL + V + DFG+A+ + + + + +MAPE + +
Sbjct: 166 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 225
Query: 442 NGDVYSFGIMLMKTF-IGKKP 461
DV+SFG++L + F +G P
Sbjct: 226 QSDVWSFGVLLWEIFSLGASP 246
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 80/197 (40%), Gaps = 30/197 (15%)
Query: 335 LILEYKPHGSLEKYL--YSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392
++ E P GSL L + G+ L R + VA + Y+ S IH D+ A N
Sbjct: 87 MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---SKRFIHRDLAARN 141
Query: 393 VLLDDNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFG 449
+LL + + DFG+ + +D + Q + APE + S D + FG
Sbjct: 142 LLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 201
Query: 450 IMLMKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMS 508
+ L + F G++P W+ ++ +++ + + +E E
Sbjct: 202 VTLWEMFTYGQEP-----------------WIGLNGSQIL--HKIDKEGERLPRPEDCPQ 242
Query: 509 FVFNLAMECTVESPEQR 525
++N+ ++C PE R
Sbjct: 243 DIYNVMVQCWAHKPEDR 259
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 80/197 (40%), Gaps = 30/197 (15%)
Query: 335 LILEYKPHGSLEKYL--YSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392
++ E P GSL L + G+ L R + VA + Y+ S IH D+ A N
Sbjct: 97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---SKRFIHRDLAARN 151
Query: 393 VLLDDNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFG 449
+LL + + DFG+ + +D + Q + APE + S D + FG
Sbjct: 152 LLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 211
Query: 450 IMLMKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMS 508
+ L + F G++P W+ ++ +++ + + +E E
Sbjct: 212 VTLWEMFTYGQEP-----------------WIGLNGSQIL--HKIDKEGERLPRPEDCPQ 252
Query: 509 FVFNLAMECTVESPEQR 525
++N+ ++C PE R
Sbjct: 253 DIYNVMVQCWAHKPEDR 269
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPE 432
M F S IH D+ A N+LL + V + DFG+A+ + + + + +MAPE
Sbjct: 204 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 263
Query: 433 YGREGRVSANGDVYSFGIMLMKTF-IGKKP 461
+ + DV+SFG++L + F +G P
Sbjct: 264 TIFDRVYTIQSDVWSFGVLLWEIFSLGASP 293
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPE 432
M F S IH D+ A N+LL + V + DFG+A+ + + + + +MAPE
Sbjct: 211 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 270
Query: 433 YGREGRVSANGDVYSFGIMLMKTF-IGKKP 461
+ + DV+SFG++L + F +G P
Sbjct: 271 TIFDRVYTIQSDVWSFGVLLWEIFSLGASP 300
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 12/185 (6%)
Query: 274 SIHHASWKNALLLRTVLPLRTIFMIVVILLI-LRCRKRGKRPSNDANISPVATSCSNEEF 332
++ WK L V L+ M V L K K P N+ + C+ E
Sbjct: 28 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP----NLVQLLGVCTREPP 83
Query: 333 KALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKAN 391
+I E+ +G+L YL N + L ++ A+EY+ IH D+ A
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAAR 140
Query: 392 NVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFG 449
N L+ +N + ++DFG+++ TG D I + APE + S DV++FG
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 199
Query: 450 IMLMK 454
++L +
Sbjct: 200 VLLWE 204
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPE 432
M F S IH D+ A N+LL + V + DFG+A+ + + + + +MAPE
Sbjct: 213 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 272
Query: 433 YGREGRVSANGDVYSFGIMLMKTF-IGKKP 461
+ + DV+SFG++L + F +G P
Sbjct: 273 TIFDRVYTIQSDVWSFGVLLWEIFSLGASP 302
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 17/110 (15%)
Query: 357 DIFQRLNSM--------------IDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAH 402
D+F+R+N+ + + LAL+++H ++H DIK+ N+ L +
Sbjct: 109 DLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQ 165
Query: 403 LSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
L DFGIA+ + T Y++PE + D+++ G +L
Sbjct: 166 LGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVL 215
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYM 429
LE +H + ++H D+K N L+ D M+ L DFGIA + S+ + + T+ YM
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 179
Query: 430 APEYGREGRVS-ANG----------DVYSFGIMLMKTFIGKKPTDEIFNE 468
PE ++ S NG DV+S G +L GK P +I N+
Sbjct: 180 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 229
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 79/189 (41%), Gaps = 31/189 (16%)
Query: 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYS-----------------------G 352
++ NI + C+ + L+ EY +G L ++L S G
Sbjct: 108 DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPG 167
Query: 353 NCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT- 411
L ++L VA + Y+ +H D+ N L+ +NMV ++DFG+++
Sbjct: 168 PPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNI 224
Query: 412 -GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTF-IGKKPTDEIFNEE 469
D I +M PE R + DV+++G++L + F G +P + +EE
Sbjct: 225 YSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE 284
Query: 470 MTLKHWVND 478
+ ++V D
Sbjct: 285 VI--YYVRD 291
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 12/184 (6%)
Query: 275 IHHASWKNALLLRTVLPLRTIFMIVVILLI-LRCRKRGKRPSNDANISPVATSCSNEEFK 333
++ WK L V L+ M V L K K P N+ + C+ E
Sbjct: 34 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP----NLVQLLGVCTREPPF 89
Query: 334 ALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392
+I E+ +G+L YL N + L ++ A+EY+ IH D+ A N
Sbjct: 90 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARN 146
Query: 393 VLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGI 450
L+ +N + ++DFG+++ TG D I + APE + S DV++FG+
Sbjct: 147 CLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 205
Query: 451 MLMK 454
+L +
Sbjct: 206 LLWE 209
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 80/197 (40%), Gaps = 30/197 (15%)
Query: 335 LILEYKPHGSLEKYL--YSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392
++ E P GSL L + G+ L R + VA + Y+ S IH D+ A N
Sbjct: 87 MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---SKRFIHRDLAARN 141
Query: 393 VLLDDNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFG 449
+LL + + DFG+ + +D + Q + APE + S D + FG
Sbjct: 142 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 201
Query: 450 IMLMKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMS 508
+ L + F G++P W+ ++ +++ + + +E E
Sbjct: 202 VTLWEMFTYGQEP-----------------WIGLNGSQIL--HKIDKEGERLPRPEDCPQ 242
Query: 509 FVFNLAMECTVESPEQR 525
++N+ ++C PE R
Sbjct: 243 DIYNVMVQCWAHKPEDR 259
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLD-----IFQRLNSMIDVALAL-EYMHFGYSAPVIHCDI 388
+I+E G L+ YL S ++ L+ MI +A + + M + + +H D+
Sbjct: 99 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 158
Query: 389 KANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVY 446
A N ++ ++ + DFG+ + D + L + +M+PE ++G + DV+
Sbjct: 159 AARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 218
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQ 505
SFG++L + + ++P + NE++ + V++ LL + D
Sbjct: 219 SFGVVLWEIATLAEQPYQGLSNEQV-------------LRFVMEGGLLDKPD-------N 258
Query: 506 FMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESLLKKV 546
+F L C +P+ R + EI++ + + +E ++V
Sbjct: 259 CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 299
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 80/197 (40%), Gaps = 30/197 (15%)
Query: 335 LILEYKPHGSLEKYL--YSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392
++ E P GSL L + G+ L R + VA + Y+ S IH D+ A N
Sbjct: 91 MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---SKRFIHRDLAARN 145
Query: 393 VLLDDNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFG 449
+LL + + DFG+ + +D + Q + APE + S D + FG
Sbjct: 146 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 205
Query: 450 IMLMKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMS 508
+ L + F G++P W+ ++ +++ + + +E E
Sbjct: 206 VTLWEMFTYGQEP-----------------WIGLNGSQIL--HKIDKEGERLPRPEDCPQ 246
Query: 509 FVFNLAMECTVESPEQR 525
++N+ ++C PE R
Sbjct: 247 DIYNVMVQCWAHKPEDR 263
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYM 429
LE +H + ++H D+K N L+ D M+ L DFGIA + S+ + + T+ YM
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 175
Query: 430 APEYGREGRVS-ANG----------DVYSFGIMLMKTFIGKKPTDEIFNE 468
PE ++ S NG DV+S G +L GK P +I N+
Sbjct: 176 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 225
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 17/127 (13%)
Query: 355 SLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--G 412
S+D ++R + ++ LE +H + ++H D+K N L+ D M+ L DFGIA
Sbjct: 104 SIDPWERKSYWKNM---LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQP 159
Query: 413 EDQSMTQTQTLATIGYMAPEYGREGRVS-ANG----------DVYSFGIMLMKTFIGKKP 461
+ S+ + + T+ YM PE ++ S NG DV+S G +L GK P
Sbjct: 160 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 219
Query: 462 TDEIFNE 468
+I N+
Sbjct: 220 FQQIINQ 226
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 80/197 (40%), Gaps = 30/197 (15%)
Query: 335 LILEYKPHGSLEKYL--YSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392
++ E P GSL L + G+ L R + VA + Y+ S IH D+ A N
Sbjct: 87 MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---SKRFIHRDLAARN 141
Query: 393 VLLDDNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFG 449
+LL + + DFG+ + +D + Q + APE + S D + FG
Sbjct: 142 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 201
Query: 450 IMLMKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMS 508
+ L + F G++P W+ ++ +++ + + +E E
Sbjct: 202 VTLWEMFTYGQEP-----------------WIGLNGSQIL--HKIDKEGERLPRPEDCPQ 242
Query: 509 FVFNLAMECTVESPEQR 525
++N+ ++C PE R
Sbjct: 243 DIYNVMVQCWAHKPEDR 259
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 80/197 (40%), Gaps = 30/197 (15%)
Query: 335 LILEYKPHGSLEKYL--YSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392
++ E P GSL L + G+ L R + VA + Y+ S IH D+ A N
Sbjct: 97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---SKRFIHRDLAARN 151
Query: 393 VLLDDNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFG 449
+LL + + DFG+ + +D + Q + APE + S D + FG
Sbjct: 152 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 211
Query: 450 IMLMKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMS 508
+ L + F G++P W+ ++ +++ + + +E E
Sbjct: 212 VTLWEMFTYGQEP-----------------WIGLNGSQIL--HKIDKEGERLPRPEDCPQ 252
Query: 509 FVFNLAMECTVESPEQR 525
++N+ ++C PE R
Sbjct: 253 DIYNVMVQCWAHKPEDR 269
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 12/185 (6%)
Query: 274 SIHHASWKNALLLRTVLPLRTIFMIVVILLI-LRCRKRGKRPSNDANISPVATSCSNEEF 332
++ WK L V L+ M V L K K P N+ + C+ E
Sbjct: 26 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP----NLVQLLGVCTREPP 81
Query: 333 KALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKAN 391
+I E+ +G+L YL N + L ++ A+EY+ IH D+ A
Sbjct: 82 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAAR 138
Query: 392 NVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFG 449
N L+ +N + ++DFG+++ TG D I + APE + S DV++FG
Sbjct: 139 NCLVGENHLVKVADFGLSRLMTG-DTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 197
Query: 450 IMLMK 454
++L +
Sbjct: 198 VLLWE 202
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 80/197 (40%), Gaps = 30/197 (15%)
Query: 335 LILEYKPHGSLEKYL--YSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392
++ E P GSL L + G+ L R + VA + Y+ S IH D+ A N
Sbjct: 91 MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---SKRFIHRDLAARN 145
Query: 393 VLLDDNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFG 449
+LL + + DFG+ + +D + Q + APE + S D + FG
Sbjct: 146 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 205
Query: 450 IMLMKTFI-GKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQFMS 508
+ L + F G++P W+ ++ +++ + + +E E
Sbjct: 206 VTLWEMFTYGQEP-----------------WIGLNGSQIL--HKIDKEGERLPRPEDCPQ 246
Query: 509 FVFNLAMECTVESPEQR 525
++N+ ++C PE R
Sbjct: 247 DIYNVMVQCWAHKPEDR 263
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 71/145 (48%), Gaps = 9/145 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLD-----IFQRLNSMIDVALAL-EYMHFGYSAPVIHCDI 388
+I+E G L+ YL S ++ L+ MI +A + + M + + +H D+
Sbjct: 90 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 149
Query: 389 KANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVY 446
A N ++ ++ + DFG+ + D + L + +M+PE ++G + DV+
Sbjct: 150 AARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 209
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEM 470
SFG++L + + ++P + NE++
Sbjct: 210 SFGVVLWEIATLAEQPYQGLSNEQV 234
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYM 429
LE +H + ++H D+K N L+ D M+ L DFGIA + S+ + + T+ YM
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 195
Query: 430 APEYGREGRVS-ANG----------DVYSFGIMLMKTFIGKKPTDEIFNE 468
PE ++ S NG DV+S G +L GK P +I N+
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 245
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
L+LE+ P G L K L + D + M ++A AL Y H VIH DIK N+L
Sbjct: 92 LMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLL 147
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+ ++DFG + S+ + T+ Y+ PE D++ G++ +
Sbjct: 148 MGYKGELKIADFGWSVHAP--SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE 205
Query: 455 TFIGKKPTD 463
+G P D
Sbjct: 206 FLVGMPPFD 214
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 275 IHHASWKNALLLRTVLPLRTIFMIVVILLI-LRCRKRGKRPSNDANISPVATSCSNEEFK 333
++ WK L V L+ M V L K K P N+ + C+ E
Sbjct: 233 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP----NLVQLLGVCTREPPF 288
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMI------DVALALEYMHFGYSAPVIHCD 387
+I E+ +G+L YL N Q +N+++ ++ A+EY+ IH +
Sbjct: 289 YIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKNFIHRN 340
Query: 388 IKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDV 445
+ A N L+ +N + ++DFG+++ TG D I + APE + S DV
Sbjct: 341 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 399
Query: 446 YSFGIMLMK 454
++FG++L +
Sbjct: 400 WAFGVLLWE 408
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
L+LE+ P G L K L + D + M ++A AL Y H VIH DIK N+L
Sbjct: 91 LMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLL 146
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+ ++DFG + S+ + T+ Y+ PE D++ G++ +
Sbjct: 147 MGYKGELKIADFGWSVHAP--SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE 204
Query: 455 TFIGKKPTD 463
+G P D
Sbjct: 205 FLVGMPPFD 213
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
L+ +Y P GSL ++ +L LN + +A + Y+ ++H ++ A NVL
Sbjct: 109 LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVL 165
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
L ++DFG+A +D+ + ++ I +MA E G+ + DV+S+G+ +
Sbjct: 166 LKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTV 225
Query: 453 MK 454
+
Sbjct: 226 WE 227
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
L+LE+ P G L K L + D + M ++A AL Y H VIH DIK N+L
Sbjct: 91 LMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLL 146
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+ ++DFG + S+ + T+ Y+ PE D++ G++ +
Sbjct: 147 MGYKGELKIADFGWSVHAP--SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE 204
Query: 455 TFIGKKPTD 463
+G P D
Sbjct: 205 FLVGMPPFD 213
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 335 LILEYKPHGSLEKYLYS-----GNCSLDIFQRLNSMIDVALAL-EYMHFGYSAPVIHCDI 388
+I+E G L+ YL S N + L+ MI +A + + M + + +H D+
Sbjct: 105 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 164
Query: 389 KANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVY 446
A N ++ ++ + DFG+ + D + L + +M+PE ++G + DV+
Sbjct: 165 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 224
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQ 505
SFG++L + + ++P + NE++ + V++ LL + D
Sbjct: 225 SFGVVLWEIATLAEQPYQGLSNEQV-------------LRFVMEGGLLDKPD-------N 264
Query: 506 FMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESLLKKV 546
+F L C +P+ R + EI++ + + +E ++V
Sbjct: 265 CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 305
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 275 IHHASWKNALLLRTVLPLRTIFMIVVILLI-LRCRKRGKRPSNDANISPVATSCSNEEFK 333
++ WK L V L+ M V L K K P N+ + C+ E
Sbjct: 275 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP----NLVQLLGVCTREPPF 330
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMI------DVALALEYMHFGYSAPVIHCD 387
+I E+ +G+L YL N Q +N+++ ++ A+EY+ IH +
Sbjct: 331 YIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKNFIHRN 382
Query: 388 IKANNVLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDV 445
+ A N L+ +N + ++DFG+++ TG D I + APE + S DV
Sbjct: 383 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 441
Query: 446 YSFGIMLMK 454
++FG++L +
Sbjct: 442 WAFGVLLWE 450
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Query: 334 ALILEYKPHGSLEKYLY-SGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392
++ +E+ GSL++ L +G I +++ I V L Y+ + ++H D+K +N
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVS--IAVIKGLTYLREKHK--IMHRDVKPSN 135
Query: 393 VLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+L++ L DFG+ +G+ + T YM+PE + S D++S G+ L
Sbjct: 136 ILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 193
Query: 453 MKTFIGKKPTDEIFNEEMTL 472
++ +G+ P +E+ L
Sbjct: 194 VEMAVGRYPIPPPDAKELEL 213
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 335 LILEYKPHGSLEKYLYS-----GNCSLDIFQRLNSMIDVALAL-EYMHFGYSAPVIHCDI 388
+I+E G L+ YL S N + L+ MI +A + + M + + +H D+
Sbjct: 95 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 154
Query: 389 KANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVY 446
A N ++ ++ + DFG+ + D + L + +M+PE ++G + DV+
Sbjct: 155 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 214
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQ 505
SFG++L + + ++P + NE++ + V++ LL + D
Sbjct: 215 SFGVVLWEIATLAEQPYQGLSNEQV-------------LRFVMEGGLLDKPD-------N 254
Query: 506 FMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESLLKKV 546
+F L C +P+ R + EI++ + + +E ++V
Sbjct: 255 CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 295
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
L+ +Y P GSL ++ +L LN + +A + Y+ ++H ++ A NVL
Sbjct: 91 LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVL 147
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
L ++DFG+A +D+ + ++ I +MA E G+ + DV+S+G+ +
Sbjct: 148 LKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTV 207
Query: 453 MK 454
+
Sbjct: 208 WE 209
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Query: 334 ALILEYKPHGSLEKYLY-SGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392
++ +E+ GSL++ L +G I +++ I V L Y+ + ++H D+K +N
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVS--IAVIKGLTYLREKHK--IMHRDVKPSN 135
Query: 393 VLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+L++ L DFG+ +G+ + T YM+PE + S D++S G+ L
Sbjct: 136 ILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 193
Query: 453 MKTFIGKKPTDEIFNEEMTL 472
++ +G+ P +E+ L
Sbjct: 194 VEMAVGRYPIPPPDAKELEL 213
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Query: 334 ALILEYKPHGSLEKYLY-SGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392
++ +E+ GSL++ L +G I +++ I V L Y+ + ++H D+K +N
Sbjct: 142 SICMEHMDGGSLDQVLKKAGRIPEQILGKVS--IAVIKGLTYLREKHK--IMHRDVKPSN 197
Query: 393 VLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+L++ L DFG+ +G+ + T YM+PE + S D++S G+ L
Sbjct: 198 ILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 255
Query: 453 MKTFIGKKPTDEIFNEEMTL 472
++ +G+ P +E+ L
Sbjct: 256 VEMAVGRYPIPPPDAKELEL 275
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Query: 334 ALILEYKPHGSLEKYLY-SGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392
++ +E+ GSL++ L +G I +++ I V L Y+ + ++H D+K +N
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVS--IAVIKGLTYLREKHK--IMHRDVKPSN 135
Query: 393 VLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+L++ L DFG+ +G+ + T YM+PE + S D++S G+ L
Sbjct: 136 ILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 193
Query: 453 MKTFIGKKPTDEIFNEEMTL 472
++ +G+ P +E+ L
Sbjct: 194 VEMAVGRYPIPPPDAKELEL 213
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Query: 334 ALILEYKPHGSLEKYLY-SGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392
++ +E+ GSL++ L +G I +++ I V L Y+ + ++H D+K +N
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVS--IAVIKGLTYLREKHK--IMHRDVKPSN 135
Query: 393 VLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+L++ L DFG+ +G+ + T YM+PE + S D++S G+ L
Sbjct: 136 ILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 193
Query: 453 MKTFIGKKPTDEIFNEEMTL 472
++ +G+ P +E+ L
Sbjct: 194 VEMAVGRYPIPPPDAKELEL 213
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Query: 334 ALILEYKPHGSLEKYLY-SGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392
++ +E+ GSL++ L +G I +++ I V L Y+ + ++H D+K +N
Sbjct: 107 SICMEHMDGGSLDQVLKKAGRIPEQILGKVS--IAVIKGLTYLREKHK--IMHRDVKPSN 162
Query: 393 VLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+L++ L DFG+ +G+ + T YM+PE + S D++S G+ L
Sbjct: 163 ILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 220
Query: 453 MKTFIGKKPTDEIFNEEMTL 472
++ +G+ P +E+ L
Sbjct: 221 VEMAVGRYPIPPPDAKELEL 240
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 24/142 (16%)
Query: 334 ALILEYKPHGSL-EKYLYSGNCSLD----IFQRLNSMIDVALALEYMHFGYSAPVIHCDI 388
A+++EY G L E+ +G S D FQ+L S + A++ V H D+
Sbjct: 91 AIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ---------VCHRDL 141
Query: 389 KANNVLLDDNMVAHLS--DFGIAKTGEDQSMTQTQTLATIGYMAPEY----GREGRVSAN 442
K N LLD + L DFG +K+ S ++ T+ T Y+APE +G+V+
Sbjct: 142 KLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS-TVGTPAYIAPEVLLKKEYDGKVA-- 198
Query: 443 GDVYSFGIMLMKTFIGKKPTDE 464
DV+S G+ L +G P ++
Sbjct: 199 -DVWSCGVTLYVMLVGAYPFED 219
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLD-----IFQRLNSMIDVALAL-EYMHFGYSAPVIHCDI 388
+I+E G L+ YL S ++ L+ MI +A + + M + + +H D+
Sbjct: 127 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 186
Query: 389 KANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVY 446
A N ++ ++ + DFG+ + D + L + +M+PE ++G + DV+
Sbjct: 187 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 246
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQ 505
SFG++L + + ++P + NE++ + V++ LL + D
Sbjct: 247 SFGVVLWEIATLAEQPYQGLSNEQV-------------LRFVMEGGLLDKPD-------N 286
Query: 506 FMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESLLKKV 546
+F L C +P+ R + EI++ + + +E ++V
Sbjct: 287 CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 327
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 24/142 (16%)
Query: 334 ALILEYKPHGSL-EKYLYSGNCSLD----IFQRLNSMIDVALALEYMHFGYSAPVIHCDI 388
A+++EY G L E+ +G S D FQ+L S + A++ V H D+
Sbjct: 90 AIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ---------VCHRDL 140
Query: 389 KANNVLLDDNMVAHLS--DFGIAKTGEDQSMTQTQTLATIGYMAPEY----GREGRVSAN 442
K N LLD + L DFG +K+ S ++ T+ T Y+APE +G+V+
Sbjct: 141 KLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS-TVGTPAYIAPEVLLKKEYDGKVA-- 197
Query: 443 GDVYSFGIMLMKTFIGKKPTDE 464
DV+S G+ L +G P ++
Sbjct: 198 -DVWSCGVTLYVMLVGAYPFED 218
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 24/142 (16%)
Query: 334 ALILEYKPHGSL-EKYLYSGNCSLD----IFQRLNSMIDVALALEYMHFGYSAPVIHCDI 388
A+++EY G L E+ +G S D FQ+L S + A A++ V H D+
Sbjct: 91 AIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQ---------VAHRDL 141
Query: 389 KANNVLLDDNMVAHL--SDFGIAKTGEDQSMTQTQTLATIGYMAPEY----GREGRVSAN 442
K N LLD + L +DFG +K S ++ + T Y+APE +G+V+
Sbjct: 142 KLENTLLDGSPAPRLKIADFGYSKASVLHSQPKS-AVGTPAYIAPEVLLKKEYDGKVA-- 198
Query: 443 GDVYSFGIMLMKTFIGKKPTDE 464
DV+S G+ L +G P ++
Sbjct: 199 -DVWSCGVTLYVMLVGAYPFED 219
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 366 IDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLAT 425
+ + ALE++H S VIH D+K +NVL++ + DFGI+ D S+ +T
Sbjct: 160 VSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVD-SVAKTIDAGC 216
Query: 426 IGYMAPEY-----GREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWL 480
YMAPE ++G S D++S GI +++ I + P D LK V +
Sbjct: 217 KPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS 275
Query: 481 PISIMEVIDANLLSREDIHFVAK 503
P + A+ S E + F ++
Sbjct: 276 P-----QLPADKFSAEFVDFTSQ 293
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
Query: 334 ALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNV 393
++ +E+ GSL++ L I + + + +A+ + ++H D+K +N+
Sbjct: 90 SICMEHMDGGSLDQVLKEAK---RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNI 146
Query: 394 LLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLM 453
L++ L DFG+ +G+ + T YMAPE + S D++S G+ L+
Sbjct: 147 LVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLV 204
Query: 454 KTFIGKKP 461
+ +G+ P
Sbjct: 205 ELAVGRYP 212
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 334 ALILEYKPHGSLEKYLY-SGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392
++ +E+ GSL++ L +G I +++ I V L Y+ + ++H D+K +N
Sbjct: 99 SICMEHMDGGSLDQVLKKAGRIPEQILGKVS--IAVIKGLTYLREKHK--IMHRDVKPSN 154
Query: 393 VLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+L++ L DFG+ +G+ + T YM+PE + S D++S G+ L
Sbjct: 155 ILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 212
Query: 453 MKTFIGKKP 461
++ +G+ P
Sbjct: 213 VEMAVGRYP 221
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 13/90 (14%)
Query: 377 FGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPE---- 432
F +S +IH DIK N+L+ + V L DFG A+T +AT Y APE
Sbjct: 139 FCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVG 198
Query: 433 ---YGREGRVSANGDVYSFGIMLMKTFIGK 459
YG+ DV++ G ++ + F+G+
Sbjct: 199 DVKYGKA------VDVWAIGCLVTEMFMGE 222
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 17/127 (13%)
Query: 355 SLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--G 412
S+D ++R + ++ LE +H + ++H D+K N L+ D M+ L DFGIA
Sbjct: 151 SIDPWERKSYWKNM---LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQP 206
Query: 413 EDQSMTQTQTLATIGYMAPEYGREGRVS-ANG----------DVYSFGIMLMKTFIGKKP 461
+ S+ + + T+ YM PE ++ S NG DV+S G +L GK P
Sbjct: 207 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
Query: 462 TDEIFNE 468
+I N+
Sbjct: 267 FQQIINQ 273
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYM 429
LE +H + ++H D+K N L+ D M+ L DFGIA + S+ + + T+ YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 430 APEYGREGRVS-ANG----------DVYSFGIMLMKTFIGKKPTDEIFNE 468
PE ++ S NG DV+S G +L GK P +I N+
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 273
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLD-----IFQRLNSMIDVALAL-EYMHFGYSAPVIHCDI 388
+I+E G L+ YL S ++ L+ MI +A + + M + + +H D+
Sbjct: 92 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 151
Query: 389 KANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVY 446
A N ++ ++ + DFG+ + D + L + +M+PE ++G + DV+
Sbjct: 152 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 211
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQ 505
SFG++L + + ++P + NE++ + V++ LL + D
Sbjct: 212 SFGVVLWEIATLAEQPYQGLSNEQV-------------LRFVMEGGLLDKPD-------N 251
Query: 506 FMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESLLKKV 546
+F L C +P+ R + EI++ + + +E ++V
Sbjct: 252 CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 292
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSL-DIFQRLNSMIDVAL-ALEYMH 376
NI S S F + +E P GSL L S L D Q + L L+Y+H
Sbjct: 66 NIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH 125
Query: 377 FGYSAPVIHCDIKANNVLLDD-NMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPE--- 432
++H DIK +NVL++ + V +SDFG +K + T+ YMAPE
Sbjct: 126 ---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIID 182
Query: 433 YGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTL 472
G G A D++S G +++ GK P E+ + +
Sbjct: 183 KGPRGYGKA-ADIWSLGCTIIEMATGKPPFYELGEPQAAM 221
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLD-----IFQRLNSMIDVALAL-EYMHFGYSAPVIHCDI 388
+I+E G L+ YL S ++ L+ MI +A + + M + + +H D+
Sbjct: 99 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 158
Query: 389 KANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVY 446
A N ++ ++ + DFG+ + D + L + +M+PE ++G + DV+
Sbjct: 159 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 218
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQ 505
SFG++L + + ++P + NE++ + V++ LL + D
Sbjct: 219 SFGVVLWEIATLAEQPYQGLSNEQV-------------LRFVMEGGLLDKPD-------N 258
Query: 506 FMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESLLKKV 546
+F L C +P+ R + EI++ + + +E ++V
Sbjct: 259 CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 299
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLD-----IFQRLNSMIDVALAL-EYMHFGYSAPVIHCDI 388
+I+E G L+ YL S ++ L+ MI +A + + M + + +H D+
Sbjct: 96 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 155
Query: 389 KANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVY 446
A N ++ ++ + DFG+ + D + L + +M+PE ++G + DV+
Sbjct: 156 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 215
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQ 505
SFG++L + + ++P + NE++ + V++ LL + D
Sbjct: 216 SFGVVLWEIATLAEQPYQGLSNEQV-------------LRFVMEGGLLDKPD-------N 255
Query: 506 FMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESLLKKV 546
+F L C +P+ R + EI++ + + +E ++V
Sbjct: 256 CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 296
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLD-----IFQRLNSMIDVALAL-EYMHFGYSAPVIHCDI 388
+I+E G L+ YL S ++ L+ MI +A + + M + + +H D+
Sbjct: 98 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 157
Query: 389 KANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVY 446
A N ++ ++ + DFG+ + D + L + +M+PE ++G + DV+
Sbjct: 158 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 217
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQ 505
SFG++L + + ++P + NE++ + V++ LL + D
Sbjct: 218 SFGVVLWEIATLAEQPYQGLSNEQV-------------LRFVMEGGLLDKPD-------N 257
Query: 506 FMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESLLKKV 546
+F L C +P+ R + EI++ + + +E ++V
Sbjct: 258 CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 298
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
++ AL+Y+H V++ D+K N++LD + ++DFG+ K G T T
Sbjct: 259 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTP 316
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D + G+++ + G+ P
Sbjct: 317 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 63/136 (46%), Gaps = 18/136 (13%)
Query: 334 ALILEYKPHGSL-EKYLYSGNCSLD----IFQRLNSMIDVALALEYMHFGYSAPVIHCDI 388
A+I+EY G L E+ +G S D FQ+L S + Y H S + H D+
Sbjct: 92 AIIMEYASGGELYERICNAGRFSEDEARFFFQQLLS------GVSYCH---SMQICHRDL 142
Query: 389 KANNVLLDDNMVAHLS--DFGIAKTGEDQSMTQTQTLATIGYMAPEY-GREGRVSANGDV 445
K N LLD + L DFG +K+ S ++ T+ T Y+APE R+ DV
Sbjct: 143 KLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS-TVGTPAYIAPEVLLRQEYDGKIADV 201
Query: 446 YSFGIMLMKTFIGKKP 461
+S G+ L +G P
Sbjct: 202 WSCGVTLYVMLVGAYP 217
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLD-----IFQRLNSMIDVALAL-EYMHFGYSAPVIHCDI 388
+I+E G L+ YL S ++ L+ MI +A + + M + + +H D+
Sbjct: 105 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 164
Query: 389 KANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVY 446
A N ++ ++ + DFG+ + D + L + +M+PE ++G + DV+
Sbjct: 165 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 224
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQ 505
SFG++L + + ++P + NE++ + V++ LL + D
Sbjct: 225 SFGVVLWEIATLAEQPYQGLSNEQV-------------LRFVMEGGLLDKPD-------N 264
Query: 506 FMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESLLKKV 546
+F L C +P+ R + EI++ + + +E ++V
Sbjct: 265 CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 305
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 22/161 (13%)
Query: 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYL---------YSGNCSLDIFQRLNSMI 366
N ++ + +CS + LI+EY +GSL +L Y G+ L+
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 367 DVALAL-----------EYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GE 413
+ AL + + M + ++H D+ A N+L+ + +SDFG+++ E
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 414 DQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
D + ++Q + +MA E + + DV+SFG++L +
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
++ AL+Y+H V++ D+K N++LD + ++DFG+ K G T T
Sbjct: 256 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTP 313
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D + G+++ + G+ P
Sbjct: 314 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 7/124 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCS---LDIFQRLNSMIDVALALEYMHFGYSA--PVIHCDIK 389
+++EY G L + G LD L M + LAL+ H V+H D+K
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 390 ANNVLLDDNMVAHLSDFGIAKT-GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSF 448
NV LD L DFG+A+ D S +T + T YM+PE + D++S
Sbjct: 144 PANVFLDGKQNVKLGDFGLARILNHDTSFAKT-FVGTPYYMSPEQMNRMSYNEKSDIWSL 202
Query: 449 GIML 452
G +L
Sbjct: 203 GCLL 206
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLD-----IFQRLNSMIDVALAL-EYMHFGYSAPVIHCDI 388
+I+E G L+ YL S ++ L+ MI +A + + M + + +H D+
Sbjct: 98 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 157
Query: 389 KANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVY 446
A N ++ ++ + DFG+ + D + L + +M+PE ++G + DV+
Sbjct: 158 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 217
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQ 505
SFG++L + + ++P + NE++ + V++ LL + D
Sbjct: 218 SFGVVLWEIATLAEQPYQGLSNEQV-------------LRFVMEGGLLDKPD-------N 257
Query: 506 FMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIESLLKKV 546
+F L C +P+ R + EI++ + + +E ++V
Sbjct: 258 CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 298
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
++ AL+Y+H V++ D+K N++LD + ++DFG+ K G T T
Sbjct: 116 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTP 173
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D + G+++ + G+ P
Sbjct: 174 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
++ AL+Y+H V++ D+K N++LD + ++DFG+ K G T T
Sbjct: 118 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTP 175
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D + G+++ + G+ P
Sbjct: 176 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Query: 366 IDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLAT 425
+ + ALE+MH S V+H DIK NV + V L D G+ + ++ + T
Sbjct: 143 VQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGT 199
Query: 426 IGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTL 472
YM+PE E + D++S G +L + + P + ++M L
Sbjct: 200 PYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP---FYGDKMNL 243
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
++A+ L ++ S +I+ D+K +NV+LD ++DFG+ K +T T
Sbjct: 129 EIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTP 185
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP-----TDEIFNEEM 470
Y+APE + D ++FG++L + G+ P DE+F M
Sbjct: 186 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM 234
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 22/161 (13%)
Query: 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYL---------YSGNCSLDIFQRLNSMI 366
N ++ + +CS + LI+EY +GSL +L Y G+ L+
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 367 DVALAL-----------EYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GE 413
+ AL + + M + ++H D+ A N+L+ + +SDFG+++ E
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 414 DQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
D + ++Q + +MA E + + DV+SFG++L +
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
++ AL+Y+H V++ D+K N++LD + ++DFG+ K G T T
Sbjct: 117 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTP 174
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D + G+++ + G+ P
Sbjct: 175 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 8/141 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI++ P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 95 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 151
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG+AK E++ I +MA E + DV+S+G+ +
Sbjct: 152 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 211
Query: 453 MK--TFIGKKPTDEIFNEEMT 471
+ TF G KP D I E++
Sbjct: 212 WELMTF-GSKPYDGIPASEIS 231
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 8/141 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI++ P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 94 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 150
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG+AK E++ I +MA E + DV+S+G+ +
Sbjct: 151 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 210
Query: 453 MK--TFIGKKPTDEIFNEEMT 471
+ TF G KP D I E++
Sbjct: 211 WELMTF-GSKPYDGIPASEIS 230
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLATIGYMAPEYGREGRVS 440
+ H DIK N+LLD+ +SDFG+A ++ + T+ Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 441 ANG-DVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475
A DV+S GI+L G+ P D+ + W
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDW 220
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 8/141 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI++ P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 100 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 156
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG+AK E++ I +MA E + DV+S+G+ +
Sbjct: 157 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 216
Query: 453 MK--TFIGKKPTDEIFNEEMT 471
+ TF G KP D I E++
Sbjct: 217 WELMTF-GSKPYDGIPASEIS 236
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 8/141 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI++ P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 97 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 153
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG+AK E++ I +MA E + DV+S+G+ +
Sbjct: 154 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 213
Query: 453 MK--TFIGKKPTDEIFNEEMT 471
+ TF G KP D I E++
Sbjct: 214 WELMTF-GSKPYDGIPASEIS 233
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 14/110 (12%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYM 429
LE +H + ++H D+K N L+ D M+ L DFGIA + + + + T+ YM
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDXXXVVKDSQVGTVNYM 195
Query: 430 APEYGREGRVS-ANG----------DVYSFGIMLMKTFIGKKPTDEIFNE 468
PE ++ S NG DV+S G +L GK P +I N+
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 245
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 350 YSGNCSLDIFQRLNSMID---------VALALEYMHFGYSAPVIHCDIKANNVLLDDNMV 400
Y+GN D + + M + + A+EY H ++H D+K N+LLD+++
Sbjct: 89 YAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLN 145
Query: 401 AHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG--DVYSFGIMLMKTFIG 458
++DFG++ D + +T + + Y APE G++ A DV+S G++L
Sbjct: 146 VKIADFGLSNIMTDGNFLKT-SCGSPNYAAPEV-ISGKLYAGPEVDVWSCGVILYVMLCR 203
Query: 459 KKPTDE---------IFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQF 506
+ P D+ I N TL +++ I ++ N L+R IH + ++ +
Sbjct: 204 RLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 260
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 8/166 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI + P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 149
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG+AK E++ I +MA E + DV+S+G+ +
Sbjct: 150 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 209
Query: 453 MK--TFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSRE 496
+ TF G KP D I E++ + LP + ID ++ R+
Sbjct: 210 WELMTF-GSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRK 254
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 350 YSGNCSLDIFQRLNSMID---------VALALEYMHFGYSAPVIHCDIKANNVLLDDNMV 400
Y+GN D + + M + + A+EY H ++H D+K N+LLD+++
Sbjct: 85 YAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLN 141
Query: 401 AHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG--DVYSFGIMLMKTFIG 458
++DFG++ D + +T + + Y APE G++ A DV+S G++L
Sbjct: 142 VKIADFGLSNIMTDGNFLKT-SCGSPNYAAPEV-ISGKLYAGPEVDVWSCGVILYVMLCR 199
Query: 459 KKPTDE---------IFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQF 506
+ P D+ I N TL +++ I ++ N L+R IH + ++ +
Sbjct: 200 RLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 256
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 8/141 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI++ P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 94 LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 150
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG+AK E++ I +MA E + DV+S+G+ +
Sbjct: 151 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 210
Query: 453 MK--TFIGKKPTDEIFNEEMT 471
+ TF G KP D I E++
Sbjct: 211 WELMTF-GSKPYDGIPASEIS 230
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 24/177 (13%)
Query: 292 LRTIFMIVVILLILRCRKRGKRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYS 351
L+ +F V I+ IL N NI + E+ L++EY G + YL +
Sbjct: 58 LQKLFREVRIMKIL----------NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA 107
Query: 352 GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT 411
+ R + A++Y H Y ++H D+KA N+LLD +M ++DFG +
Sbjct: 108 HGRMKEKEARA-KFRQIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFS-- 161
Query: 412 GEDQSMTQTQTLATI----GYMAPEYGREGRVSA-NGDVYSFGIMLMKTFIGKKPTD 463
T L T Y APE + + DV+S G++L G P D
Sbjct: 162 ---NEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 8/141 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI++ P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 96 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 152
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG+AK E++ I +MA E + DV+S+G+ +
Sbjct: 153 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 212
Query: 453 MK--TFIGKKPTDEIFNEEMT 471
+ TF G KP D I E++
Sbjct: 213 WELMTF-GSKPYDGIPASEIS 232
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 8/141 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI++ P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 93 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 149
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG+AK E++ I +MA E + DV+S+G+ +
Sbjct: 150 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 209
Query: 453 MK--TFIGKKPTDEIFNEEMT 471
+ TF G KP D I E++
Sbjct: 210 WELMTF-GSKPYDGIPASEIS 229
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 67/149 (44%), Gaps = 10/149 (6%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSL-DIFQRLNSMIDVAL-ALEYMH 376
NI S S F + +E P GSL L S L D Q + L L+Y+H
Sbjct: 80 NIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH 139
Query: 377 FGYSAPVIHCDIKANNVLLDD-NMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPE--- 432
++H DIK +NVL++ + V +SDFG +K + T+ YMAPE
Sbjct: 140 ---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIID 196
Query: 433 YGREGRVSANGDVYSFGIMLMKTFIGKKP 461
G G A D++S G +++ GK P
Sbjct: 197 KGPRGYGKA-ADIWSLGCTIIEMATGKPP 224
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 350 YSGNCSLDIFQRLNSMID---------VALALEYMHFGYSAPVIHCDIKANNVLLDDNMV 400
Y+GN D + + M + + A+EY H ++H D+K N+LLD+++
Sbjct: 94 YAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLN 150
Query: 401 AHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG--DVYSFGIMLMKTFIG 458
++DFG++ D + +T + + Y APE G++ A DV+S G++L
Sbjct: 151 VKIADFGLSNIMTDGNFLKT-SCGSPNYAAPEV-ISGKLYAGPEVDVWSCGVILYVMLCR 208
Query: 459 KKPTDE---------IFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQF 506
+ P D+ I N TL +++ I ++ N L+R IH + ++ +
Sbjct: 209 RLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 265
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 12/184 (6%)
Query: 275 IHHASWKNALLLRTVLPLRTIFMIVVILLI-LRCRKRGKRPSNDANISPVATSCSNEEFK 333
++ WK L V L+ M V L K K P N+ + C+ E
Sbjct: 236 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP----NLVQLLGVCTREPPF 291
Query: 334 ALILEYKPHGSLEKYLYSGN-CSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANN 392
+I E+ +G+L YL N + L ++ A+EY+ IH ++ A N
Sbjct: 292 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARN 348
Query: 393 VLLDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGI 450
L+ +N + ++DFG+++ TG D I + APE + S DV++FG+
Sbjct: 349 CLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 407
Query: 451 MLMK 454
+L +
Sbjct: 408 LLWE 411
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 350 YSGNCSLDIFQRLNSMID---------VALALEYMHFGYSAPVIHCDIKANNVLLDDNMV 400
Y+GN D + + M + + A+EY H ++H D+K N+LLD+++
Sbjct: 95 YAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLN 151
Query: 401 AHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG--DVYSFGIMLMKTFIG 458
++DFG++ D + +T + + Y APE G++ A DV+S G++L
Sbjct: 152 VKIADFGLSNIMTDGNFLKT-SCGSPNYAAPEV-ISGKLYAGPEVDVWSCGVILYVMLCR 209
Query: 459 KKPTDE---------IFNEEMTLKHWVNDWLPISIMEVIDANLLSREDIHFVAKEQF 506
+ P D+ I N TL +++ I ++ N L+R IH + ++ +
Sbjct: 210 RLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 266
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLL-DDNMVAHLSDFGIA----KTGEDQS-MTQTQTLA 424
ALE + + +S ++H D+KA+NVLL D A L DFG A G +S +T
Sbjct: 194 ALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPG 253
Query: 425 TIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLK 473
T +MAPE A DV+S M++ G P + F + LK
Sbjct: 254 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLK 302
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
++++ L ++H +I+ D+K +NV+LD ++DFG+ K +T + T
Sbjct: 128 EISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTP 184
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTD 463
Y+APE + D +++G++L + G+ P D
Sbjct: 185 DYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 22/161 (13%)
Query: 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYL---------YSGNCSLDIFQRLNSMI 366
N ++ + +CS + LI+EY +GSL +L Y G+ L+
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 367 DVALAL-----------EYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--GE 413
+ AL + + M + ++H D+ A N+L+ + +SDFG+++ E
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 414 DQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
D + ++Q + +MA E + + DV+SFG++L +
Sbjct: 204 DSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 8/166 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI + P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 96 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 152
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG+AK E++ I +MA E + DV+S+G+ +
Sbjct: 153 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 212
Query: 453 MK--TFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSRE 496
+ TF G KP D I E++ + LP + ID ++ R+
Sbjct: 213 WELMTF-GSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRK 257
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 8/166 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI + P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 103 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 159
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG+AK E++ I +MA E + DV+S+G+ +
Sbjct: 160 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 219
Query: 453 MK--TFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSRE 496
+ TF G KP D I E++ + LP + ID ++ R+
Sbjct: 220 WELMTF-GSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRK 264
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
++A+ L ++ S +I+ D+K +NV+LD ++DFG+ K +T T
Sbjct: 450 EIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTP 506
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP-----TDEIFNEEM 470
Y+APE + D ++FG++L + G+ P DE+F M
Sbjct: 507 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM 555
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N+L
Sbjct: 104 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLL 159
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T T Y+APE + D ++ G+++ +
Sbjct: 160 IDQQGYIQVTDFGFAKRVKGRTWT---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 216
Query: 455 TFIGKKP 461
G P
Sbjct: 217 MAAGYPP 223
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLL-DDNMVAHLSDFGIAKT------GEDQSMTQTQTL 423
ALE + + +S ++H D+KA+NVLL D A L DFG A G+D +T
Sbjct: 175 ALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDL-LTGDYIP 233
Query: 424 ATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLK 473
T +MAPE A DV+S M++ G P + F + LK
Sbjct: 234 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLK 283
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 5/123 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCS---LDIFQRLNSMIDVALALEYMHFGYSA--PVIHCDIK 389
+++EY G L + G LD L M + LAL+ H V+H D+K
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 390 ANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFG 449
NV LD L DFG+A+ + + T YM+PE + D++S G
Sbjct: 144 PANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLG 203
Query: 450 IML 452
+L
Sbjct: 204 CLL 206
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQS--MTQTQTLATIGYMAPE 432
M F S IH D+ A N+LL + + DFG+A+ ++ S + + + +MAPE
Sbjct: 174 MAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPE 233
Query: 433 YGREGRVSANGDVYSFGIMLMKTF-IGKKP 461
+ DV+S+GI L + F +G P
Sbjct: 234 SIFNCVYTFESDVWSYGIFLWELFSLGSSP 263
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 8/166 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI++ P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 95 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 151
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG AK E++ I +MA E + DV+S+G+ +
Sbjct: 152 VKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 211
Query: 453 MK--TFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSRE 496
+ TF G KP D I E++ + LP + ID ++ R+
Sbjct: 212 WELMTF-GSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRK 256
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQS--MTQTQTLATIGYMAPE 432
M F S IH D+ A N+LL + + DFG+A+ ++ S + + + +MAPE
Sbjct: 176 MAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPE 235
Query: 433 YGREGRVSANGDVYSFGIMLMKTF-IGKKP 461
+ DV+S+GI L + F +G P
Sbjct: 236 SIFNCVYTFESDVWSYGIFLWELFSLGSSP 265
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLATIGYMAPEYGREGRVS 440
+ H DIK N+LLD+ +SDFG+A ++ + T+ Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 441 ANG-DVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475
A DV+S GI+L G+ P D+ + W
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 5/123 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCS---LDIFQRLNSMIDVALALEYMHFGYSA--PVIHCDIK 389
+++EY G L + G LD L M + LAL+ H V+H D+K
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 390 ANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFG 449
NV LD L DFG+A+ + + T YM+PE + D++S G
Sbjct: 144 PANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLG 203
Query: 450 IML 452
+L
Sbjct: 204 CLL 206
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIA-KTGEDQSMTQTQTLAT 425
++ LA++ +H +H DIK +NVLLD N L+DFG K +D ++ + + T
Sbjct: 183 EMVLAIDSIH---QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGT 239
Query: 426 IGYMAPEYGRE-----GRVSANGDVYSFGIMLMKTFIGKKP 461
Y++PE + G+ D +S G+ + + G+ P
Sbjct: 240 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLATIGYMAPEYGREGRVS 440
+ H DIK N+LLD+ +SDFG+A ++ + T+ Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 441 ANG-DVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475
A DV+S GI+L G+ P D+ + W
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLATIGYMAPEYGREGRVS 440
+ H DIK N+LLD+ +SDFG+A ++ + T+ Y+APE +
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 441 ANG-DVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475
A DV+S GI+L G+ P D+ + W
Sbjct: 184 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 219
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLATIGYMAPEYGREGRVS 440
+ H DIK N+LLD+ +SDFG+A ++ + T+ Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 441 ANG-DVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475
A DV+S GI+L G+ P D+ + W
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLATIGYMAPEYGREGRVS 440
+ H DIK N+LLD+ +SDFG+A ++ + T+ Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 441 ANG-DVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475
A DV+S GI+L G+ P D+ + W
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLATIGYMAPEYGREGRVS 440
+ H DIK N+LLD+ +SDFG+A ++ + T+ Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 441 ANG-DVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475
A DV+S GI+L G+ P D+ + W
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIA-KTGEDQSMTQTQTLAT 425
++ LA++ +H +H DIK +NVLLD N L+DFG K +D ++ + + T
Sbjct: 199 EMVLAIDSIH---QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGT 255
Query: 426 IGYMAPEYGRE-----GRVSANGDVYSFGIMLMKTFIGKKP 461
Y++PE + G+ D +S G+ + + G+ P
Sbjct: 256 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 363 NSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQT 422
+ M + L+++H S V+H D+K N+L+ + L+DFG+A+ Q M T
Sbjct: 124 DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-MALTSV 179
Query: 423 LATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
+ T+ Y APE + + D++S G + + F +KP
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKP 217
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLATIGYMAPEYGREGRVS 440
+ H DIK N+LLD+ +SDFG+A ++ + T+ Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 441 ANG-DVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475
A DV+S GI+L G+ P D+ + W
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLATIGYMAPEYGREGRVS 440
+ H DIK N+LLD+ +SDFG+A ++ + T+ Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 441 ANG-DVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475
A DV+S GI+L G+ P D+ + W
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 363 NSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQT 422
+ M + L+++H S V+H D+K N+L+ + L+DFG+A+ Q M T
Sbjct: 124 DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-MALTSV 179
Query: 423 LATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
+ T+ Y APE + + D++S G + + F +KP
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKP 217
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N+L
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T T Y+APE + D ++ G+++ +
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWT---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 455 TFIGKKP 461
G P
Sbjct: 232 MAAGYPP 238
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLATIGYMAPEYGREGRVS 440
+ H DIK N+LLD+ +SDFG+A ++ + T+ Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 441 ANG-DVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475
A DV+S GI+L G+ P D+ + W
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQS--MTQTQTLATIGYMAPE 432
M F S IH D+ A N+LL + + DFG+A+ ++ S + + + +MAPE
Sbjct: 181 MAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPE 240
Query: 433 YGREGRVSANGDVYSFGIMLMKTF-IGKKP 461
+ DV+S+GI L + F +G P
Sbjct: 241 SIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQS--MTQTQTLATIGYMAPE 432
M F S IH D+ A N+LL + + DFG+A+ ++ S + + + +MAPE
Sbjct: 158 MAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPE 217
Query: 433 YGREGRVSANGDVYSFGIMLMKTF-IGKKP 461
+ DV+S+GI L + F +G P
Sbjct: 218 SIFNCVYTFESDVWSYGIFLWELFSLGSSP 247
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Query: 358 IFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSM 417
I +R+ + VA+ + VIH D+K +N+LLD+ L DFGI+ D
Sbjct: 121 IPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK- 179
Query: 418 TQTQTLATIGYMAPEY-----GREGRVSANGDVYSFGIMLMKTFIGKKP 461
+ ++ YMAPE + DV+S GI L++ G+ P
Sbjct: 180 AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLATIGYMAPEYGREGRVS 440
+ H DIK N+LLD+ +SDFG+A ++ + T+ Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 441 ANG-DVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475
A DV+S GI+L G+ P D+ + W
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 75/177 (42%), Gaps = 24/177 (13%)
Query: 292 LRTIFMIVVILLILRCRKRGKRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYS 351
L+ +F V I+ IL N NI + E+ LI+EY G + YL +
Sbjct: 55 LQKLFREVRIMKIL----------NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVA 104
Query: 352 GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT 411
+ + + + + A++Y H ++H D+KA N+LLD +M ++DFG +
Sbjct: 105 -HGRMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFS-- 158
Query: 412 GEDQSMTQTQTLATI----GYMAPEYGREGRVSA-NGDVYSFGIMLMKTFIGKKPTD 463
T L T Y APE + + DV+S G++L G P D
Sbjct: 159 ---NEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLATIGYMAPEYGREGRVS 440
+ H DIK N+LLD+ +SDFG+A ++ + T+ Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 441 ANG-DVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475
A DV+S GI+L G+ P D+ + W
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLATIGYMAPEYGREGRVS 440
+ H DIK N+LLD+ +SDFG+A ++ + T+ Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 441 ANG-DVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475
A DV+S GI+L G+ P D+ + W
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLATIGYMAPEYGREGRVS 440
+ H DIK N+LLD+ +SDFG+A ++ + T+ Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 441 ANG-DVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475
A DV+S GI+L G+ P D+ + W
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLATIGYMAPEYGREGRVS 440
+ H DIK N+LLD+ +SDFG+A ++ + T+ Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 441 ANG-DVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475
A DV+S GI+L G+ P D+ + W
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 363 NSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQT 422
+ M + L+++H S V+H D+K N+L+ + L+DFG+A+ Q M T
Sbjct: 124 DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-MALTSV 179
Query: 423 LATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
+ T+ Y APE + + D++S G + + F +KP
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKP 217
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLATIGYMAPEYGREGRVS 440
+ H DIK N+LLD+ +SDFG+A ++ + T+ Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 441 ANG-DVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475
A DV+S GI+L G+ P D+ + W
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLATIGYMAPEYGREGRVS 440
+ H DIK N+LLD+ +SDFG+A ++ + T+ Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 441 ANG-DVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475
A DV+S GI+L G+ P D+ + W
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLATIGYMAPEYGREGRVS 440
+ H DIK N+LLD+ +SDFG+A ++ + T+ Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 441 ANG-DVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475
A DV+S GI+L G+ P D+ + W
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLATIGYMAPEYGREGRVS 440
+ H DIK N+LLD+ +SDFG+A ++ + T+ Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 185
Query: 441 ANG-DVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475
A DV+S GI+L G+ P D+ + W
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)
Query: 355 SLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT--G 412
S+D ++R + ++ LE +H + ++H D+K N L+ D M+ L DFGIA
Sbjct: 151 SIDPWERKSYWKNM---LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQP 206
Query: 413 EDQSMTQTQTLATIGYMAPEYGREGRVS-ANG----------DVYSFGIMLMKTFIGKKP 461
+ S+ + + + YM PE ++ S NG DV+S G +L GK P
Sbjct: 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
Query: 462 TDEIFNE 468
+I N+
Sbjct: 267 FQQIINQ 273
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLATIGYMAPEYGREGRVS 440
+ H DIK N+LLD+ +SDFG+A ++ + T+ Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 441 ANG-DVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475
A DV+S GI+L G+ P D+ + W
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGE--DQSMTQTQTLATIGYMAPEYGREGRVS 440
+ H DIK N+LLD+ +SDFG+A ++ + T+ Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 441 ANG-DVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHW 475
A DV+S GI+L G+ P D+ + W
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI + P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 87 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 143
Query: 395 LDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG+AK E++ I +MA E + DV+S+G+ +
Sbjct: 144 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 203
Query: 453 MK--TFIGKKPTDEIFNEEMT 471
+ TF G KP D I E++
Sbjct: 204 WELMTF-GSKPYDGIPASEIS 223
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQS--MTQTQTLATIGYMAPE 432
M F S IH D+ A N+LL + + DFG+A+ ++ S + + + +MAPE
Sbjct: 181 MAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPE 240
Query: 433 YGREGRVSANGDVYSFGIMLMKTF-IGKKP 461
+ DV+S+GI L + F +G P
Sbjct: 241 SIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 15/121 (12%)
Query: 345 LEKYLYSG-NCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL---LDDNMV 400
+EK Y+ + S IFQ L+ A++Y+H ++H D+K N+L LD++
Sbjct: 108 VEKGFYTERDASRLIFQVLD-------AVKYLH---DLGIVHRDLKPENLLYYSLDEDSK 157
Query: 401 AHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKK 460
+SDFG++K ED + T GY+APE + S D +S G++ G
Sbjct: 158 IMISDFGLSKM-EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP 216
Query: 461 P 461
P
Sbjct: 217 P 217
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 70/145 (48%), Gaps = 9/145 (6%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLD-----IFQRLNSMIDVALAL-EYMHFGYSAPVIHCDI 388
+I+E G L+ YL S ++ L+ MI +A + + M + + +H D+
Sbjct: 92 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 151
Query: 389 KANNVLLDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVY 446
A N + ++ + DFG+ + D + L + +M+PE ++G + DV+
Sbjct: 152 AARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 211
Query: 447 SFGIMLMK-TFIGKKPTDEIFNEEM 470
SFG++L + + ++P + NE++
Sbjct: 212 SFGVVLWEIATLAEQPYQGLSNEQV 236
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI + P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 127 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 183
Query: 395 LDDNMVAHLSDFGIAKT--GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG+AK E++ I +MA E + DV+S+G+ +
Sbjct: 184 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 243
Query: 453 MK--TFIGKKPTDEIFNEEMT 471
+ TF G KP D I E++
Sbjct: 244 WELMTF-GSKPYDGIPASEIS 263
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI + P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 95 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 151
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG+AK E++ I +MA E + DV+S+G+ +
Sbjct: 152 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 211
Query: 453 MK--TFIGKKPTDEIFNEEMT 471
+ TF G KP D I E++
Sbjct: 212 WELMTF-GSKPYDGIPASEIS 231
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 15/121 (12%)
Query: 345 LEKYLYS-GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL---LDDNMV 400
+EK Y+ + S IFQ L+ A++Y+H ++H D+K N+L LD++
Sbjct: 108 VEKGFYTERDASRLIFQVLD-------AVKYLH---DLGIVHRDLKPENLLYYSLDEDSK 157
Query: 401 AHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKK 460
+SDFG++K ED + T GY+APE + S D +S G++ G
Sbjct: 158 IMISDFGLSKM-EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP 216
Query: 461 P 461
P
Sbjct: 217 P 217
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 15/121 (12%)
Query: 345 LEKYLYS-GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL---LDDNMV 400
+EK Y+ + S IFQ L+ A++Y+H ++H D+K N+L LD++
Sbjct: 108 VEKGFYTERDASRLIFQVLD-------AVKYLH---DLGIVHRDLKPENLLYYSLDEDSK 157
Query: 401 AHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKK 460
+SDFG++K ED + T GY+APE + S D +S G++ G
Sbjct: 158 IMISDFGLSKM-EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP 216
Query: 461 P 461
P
Sbjct: 217 P 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI + P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 96 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 152
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG+AK E++ I +MA E + DV+S+G+ +
Sbjct: 153 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 212
Query: 453 MK--TFIGKKPTDEIFNEEMT 471
+ TF G KP D I E++
Sbjct: 213 WELMTF-GSKPYDGIPASEIS 232
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 17/117 (14%)
Query: 344 SLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHL 403
SL+++ + SL Q + D LAL ++H S ++H D+K N+ L L
Sbjct: 142 SLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKL 198
Query: 404 SDFGI------AKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
DFG+ A GE Q YMAPE +G DV+S G+ +++
Sbjct: 199 GDFGLLVELGTAGAGEVQE-------GDPRYMAPEL-LQGSYGTAADVFSLGLTILE 247
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI + P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 100 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 156
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG+AK E++ I +MA E + DV+S+G+ +
Sbjct: 157 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 216
Query: 453 MK--TFIGKKPTDEIFNEEMT 471
+ TF G KP D I E++
Sbjct: 217 WELMTF-GSKPYDGIPASEIS 236
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI + P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 99 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 155
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG+AK E++ I +MA E + DV+S+G+ +
Sbjct: 156 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 215
Query: 453 MK--TFIGKKPTDEIFNEEMT 471
+ TF G KP D I E++
Sbjct: 216 WELMTF-GSKPYDGIPASEIS 235
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 23/154 (14%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMID-VALALEYMHF--------GYSAPVIH 385
LI + GSL YL GN + + L + + ++ L Y+H G+ + H
Sbjct: 90 LITAFHDKGSLTDYL-KGN--IITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAH 146
Query: 386 CDIKANNVLLDDNMVAHLSDFGIA---KTGEDQSMTQTQTLATIGYMAPEYGREGRVSAN 442
D K+ NVLL ++ A L+DFG+A + G+ T Q + T YMAPE EG ++
Sbjct: 147 RDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQ-VGTRRYMAPEV-LEGAINFQ 204
Query: 443 G------DVYSFGIMLMKTFIGKKPTDEIFNEEM 470
D+Y+ G++L + K D +E M
Sbjct: 205 RDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYM 238
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI + P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 149
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG+AK E++ I +MA E + DV+S+G+ +
Sbjct: 150 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 209
Query: 453 MK--TFIGKKPTDEIFNEEMT 471
+ TF G KP D I E++
Sbjct: 210 WELMTF-GSKPYDGIPASEIS 229
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI + P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 96 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 152
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG+AK E++ I +MA E + DV+S+G+ +
Sbjct: 153 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 212
Query: 453 MK--TFIGKKPTDEIFNEEMT 471
+ TF G KP D I E++
Sbjct: 213 WELMTF-GSKPYDGIPASEIS 232
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI + P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 93 LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 149
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG+AK E++ I +MA E + DV+S+G+ +
Sbjct: 150 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 209
Query: 453 MK--TFIGKKPTDEIFNEEMT 471
+ TF G KP D I E++
Sbjct: 210 WELMTF-GSKPYDGIPASEIS 229
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI + P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 149
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG+AK E++ I +MA E + DV+S+G+ +
Sbjct: 150 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 209
Query: 453 MK--TFIGKKPTDEIFNEEMT 471
+ TF G KP D I E++
Sbjct: 210 WELMTF-GSKPYDGIPASEIS 229
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 15/121 (12%)
Query: 345 LEKYLYS-GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL---LDDNMV 400
+EK Y+ + S IFQ L+ A++Y+H ++H D+K N+L LD++
Sbjct: 108 VEKGFYTERDASRLIFQVLD-------AVKYLH---DLGIVHRDLKPENLLYYSLDEDSK 157
Query: 401 AHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKK 460
+SDFG++K ED + T GY+APE + S D +S G++ G
Sbjct: 158 IMISDFGLSKM-EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP 216
Query: 461 P 461
P
Sbjct: 217 P 217
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 22/176 (12%)
Query: 292 LRTIFMIVVILLILRCRKRGKRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYS 351
L+ +F V I+ IL N NI + E+ LI+EY G + YL +
Sbjct: 58 LQKLFREVRIMKIL----------NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVA 107
Query: 352 GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT 411
+ + + + + A++Y H ++H D+KA N+LLD +M ++DFG +
Sbjct: 108 -HGRMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFS-- 161
Query: 412 GEDQSMTQTQTLATIG---YMAPEYGREGRVSA-NGDVYSFGIMLMKTFIGKKPTD 463
++ + A G Y APE + + DV+S G++L G P D
Sbjct: 162 --NEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI + P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 100 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 156
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG+AK E++ I +MA E + DV+S+G+ +
Sbjct: 157 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 216
Query: 453 MK--TFIGKKPTDEIFNEEMT 471
+ TF G KP D I E++
Sbjct: 217 WELMTF-GSKPYDGIPASEIS 236
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI + P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 118 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 174
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG+AK E++ I +MA E + DV+S+G+ +
Sbjct: 175 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 234
Query: 453 MK--TFIGKKPTDEIFNEEMT 471
+ TF G KP D I E++
Sbjct: 235 WELMTF-GSKPYDGIPASEIS 254
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI + P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 90 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLE---DRRLVHRDLAARNVL 146
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG+AK E++ I +MA E + DV+S+G+ +
Sbjct: 147 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 206
Query: 453 MK--TFIGKKPTDEIFNEEMT 471
+ TF G KP D I E++
Sbjct: 207 WELMTF-GSKPYDGIPASEIS 226
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI++ P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 97 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 153
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG AK E++ I +MA E + DV+S+G+ +
Sbjct: 154 VKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 213
Query: 453 MK--TFIGKKPTDEIFNEEMT 471
+ TF G KP D I E++
Sbjct: 214 WELMTF-GSKPYDGIPASEIS 233
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 347 KYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL---DDNMVAHL 403
K L C L +Q L LA++Y+H +IH D+K NVLL +++ + +
Sbjct: 248 KRLKEATCKLYFYQML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKI 297
Query: 404 SDFGIAKTGEDQSMTQTQTLATIGYMAPE----YGREGRVSANGDVYSFGIMLMKTFIGK 459
+DFG +K + S+ +T T Y+APE G G A D +S G++L G
Sbjct: 298 TDFGHSKILGETSLMRT-LCGTPTYLAPEVLVSVGTAGYNRA-VDCWSLGVILFICLSGY 355
Query: 460 KPTDE 464
P E
Sbjct: 356 PPFSE 360
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI++ P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 95 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 151
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG AK E++ I +MA E + DV+S+G+ +
Sbjct: 152 VKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 211
Query: 453 MK--TFIGKKPTDEIFNEEMT 471
+ TF G KP D I E++
Sbjct: 212 WELMTF-GSKPYDGIPASEIS 231
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 8/166 (4%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI + P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 95 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 151
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG AK E++ I +MA E + DV+S+G+ +
Sbjct: 152 VKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 211
Query: 453 MK--TFIGKKPTDEIFNEEMTLKHWVNDWLPISIMEVIDANLLSRE 496
+ TF G KP D I E++ + LP + ID ++ R+
Sbjct: 212 WELMTF-GSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRK 256
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 347 KYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL---DDNMVAHL 403
K L C L +Q L LA++Y+H +IH D+K NVLL +++ + +
Sbjct: 234 KRLKEATCKLYFYQML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKI 283
Query: 404 SDFGIAKTGEDQSMTQTQTLATIGYMAPE----YGREGRVSANGDVYSFGIMLMKTFIGK 459
+DFG +K + S+ +T T Y+APE G G A D +S G++L G
Sbjct: 284 TDFGHSKILGETSLMRT-LCGTPTYLAPEVLVSVGTAGYNRA-VDCWSLGVILFICLSGY 341
Query: 460 KPTDE 464
P E
Sbjct: 342 PPFSE 346
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T T + T+ Y AP
Sbjct: 113 LQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLL-DDNMVAHLSDFGIA----KTGEDQS-MTQTQTLA 424
ALE + + ++ ++H D+KA+NVLL D A L DFG A G +S +T
Sbjct: 175 ALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 234
Query: 425 TIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLK 473
T +MAPE A D++S M++ G P + F + LK
Sbjct: 235 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 283
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 14/153 (9%)
Query: 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM 375
N NI + E+ L++EY G + YL + + R + A++Y
Sbjct: 64 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEAR-AKFRQIVSAVQYC 122
Query: 376 HFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG----YMAP 431
H + ++H D+KA N+LLD +M ++DFG + T L T Y AP
Sbjct: 123 HQKF---IVHRDLKAENLLLDADMNIKIADFGFS-----NEFTFGNKLDTFCGSPPYAAP 174
Query: 432 EYGREGRVSA-NGDVYSFGIMLMKTFIGKKPTD 463
E + + DV+S G++L G P D
Sbjct: 175 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLL-DDNMVAHLSDFGIA----KTGEDQS-MTQTQTLA 424
ALE + + ++ ++H D+KA+NVLL D A L DFG A G +S +T
Sbjct: 173 ALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 232
Query: 425 TIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLK 473
T +MAPE A D++S M++ G P + F + LK
Sbjct: 233 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 281
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 347 KYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL---DDNMVAHL 403
K L C L +Q L LA++Y+H +IH D+K NVLL +++ + +
Sbjct: 109 KRLKEATCKLYFYQML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKI 158
Query: 404 SDFGIAKTGEDQSMTQTQTLATIGYMAPE----YGREGRVSANGDVYSFGIMLMKTFIGK 459
+DFG +K + S+ +T T Y+APE G G A D +S G++L G
Sbjct: 159 TDFGHSKILGETSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAV-DCWSLGVILFICLSGY 216
Query: 460 KPTDE 464
P E
Sbjct: 217 PPFSE 221
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLL-DDNMVAHLSDFGIA----KTGEDQS-MTQTQTLA 424
ALE + + ++ ++H D+KA+NVLL D A L DFG A G +S +T
Sbjct: 159 ALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 218
Query: 425 TIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLK 473
T +MAPE A D++S M++ G P + F + LK
Sbjct: 219 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 267
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N+L
Sbjct: 111 MVMEYVPGGEMFSHLRRIGRFXEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLL 166
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 167 IDQQGYIQVTDFGFAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 223
Query: 455 TFIGKKP 461
G P
Sbjct: 224 MAAGYPP 230
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T T + T+ Y AP
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T T + T+ Y AP
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 219
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T T + T+ Y AP
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T T + T+ Y AP
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 219
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 347 KYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL---DDNMVAHL 403
K L C L +Q L LA++Y+H +IH D+K NVLL +++ + +
Sbjct: 109 KRLKEATCKLYFYQML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKI 158
Query: 404 SDFGIAKTGEDQSMTQTQTLATIGYMAPE----YGREGRVSANGDVYSFGIMLMKTFIGK 459
+DFG +K + S+ +T T Y+APE G G A D +S G++L G
Sbjct: 159 TDFGHSKILGETSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAV-DCWSLGVILFICLSGY 216
Query: 460 KPTDE 464
P E
Sbjct: 217 PPFSE 221
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T T + T+ Y AP
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 347 KYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL---DDNMVAHL 403
K L C L +Q L LA++Y+H +IH D+K NVLL +++ + +
Sbjct: 108 KRLKEATCKLYFYQML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKI 157
Query: 404 SDFGIAKTGEDQSMTQTQTLATIGYMAPE----YGREGRVSANGDVYSFGIMLMKTFIGK 459
+DFG +K + S+ +T T Y+APE G G A D +S G++L G
Sbjct: 158 TDFGHSKILGETSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAV-DCWSLGVILFICLSGY 215
Query: 460 KPTDE 464
P E
Sbjct: 216 PPFSE 220
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 15/90 (16%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAK------------TGEDQSMTQTQTLATIGYMA 430
VIH D+K +N+L++ N + DFG+A+ TG+ M T+ +AT Y A
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM--TEXVATRWYRA 190
Query: 431 PEYG-REGRVSANGDVYSFGIMLMKTFIGK 459
PE + S DV+S G +L + F+ +
Sbjct: 191 PEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T T + T+ Y AP
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 219
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T T + T+ Y AP
Sbjct: 120 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 179
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 180 EILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 227
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 347 KYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL---DDNMVAHL 403
K L C L +Q L LA++Y+H +IH D+K NVLL +++ + +
Sbjct: 109 KRLKEATCKLYFYQML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKI 158
Query: 404 SDFGIAKTGEDQSMTQTQTLATIGYMAPE----YGREGRVSANGDVYSFGIMLMKTFIGK 459
+DFG +K + S+ +T T Y+APE G G A D +S G++L G
Sbjct: 159 TDFGHSKILGETSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAV-DCWSLGVILFICLSGY 216
Query: 460 KPTDE 464
P E
Sbjct: 217 PPFSE 221
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 24/142 (16%)
Query: 334 ALILEYKPHGSL-EKYLYSGNCSLD----IFQRLNSMIDVALALEYMHFGYSAPVIHCDI 388
A+++EY G L E+ +G S D FQ+L S + A++ V H D+
Sbjct: 91 AIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ---------VCHRDL 141
Query: 389 KANNVLLDDNMVAHLS--DFGIAKTGEDQSMTQTQTLATIGYMAPEY----GREGRVSAN 442
K N LLD + L FG +K+ S ++ T+ T Y+APE +G+V+
Sbjct: 142 KLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKS-TVGTPAYIAPEVLLKKEYDGKVA-- 198
Query: 443 GDVYSFGIMLMKTFIGKKPTDE 464
DV+S G+ L +G P ++
Sbjct: 199 -DVWSCGVTLYVMLVGAYPFED 219
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 347 KYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL---DDNMVAHL 403
K L C L +Q L LA++Y+H +IH D+K NVLL +++ + +
Sbjct: 115 KRLKEATCKLYFYQML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKI 164
Query: 404 SDFGIAKTGEDQSMTQTQTLATIGYMAPE----YGREGRVSANGDVYSFGIMLMKTFIGK 459
+DFG +K + S+ +T T Y+APE G G A D +S G++L G
Sbjct: 165 TDFGHSKILGETSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAV-DCWSLGVILFICLSGY 222
Query: 460 KPTDE 464
P E
Sbjct: 223 PPFSE 227
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
++LEY P G + +L + R + + L EY+H S +I+ D+K N+L
Sbjct: 119 MVLEYAPGGEMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 175 IDQQGYIKVADFGFAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 455 TFIGKKP 461
G P
Sbjct: 232 MAAGYPP 238
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T T + T+ Y AP
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 173
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 221
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T T + T+ Y AP
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T T + T+ Y AP
Sbjct: 120 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 179
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 180 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 227
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N+L
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFXEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 455 TFIGKKP 461
G P
Sbjct: 232 MAAGYPP 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N+L
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFXEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 455 TFIGKKP 461
G P
Sbjct: 231 MAAGYPP 237
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L + F ++ ++H D+K N+L+ L+DFG+A+ Q M T + T+ Y AP
Sbjct: 130 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ-MALTPVVVTLWYRAP 188
Query: 432 EYGREGRVSANGDVYSFGIMLMKTFIGK 459
E + + D++S G + + F K
Sbjct: 189 EVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T T + T+ Y AP
Sbjct: 117 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 176
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 224
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T T + T+ Y AP
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 219
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
L+ + P+G L ++ L LN + +A + Y+ ++H D+ A NVL
Sbjct: 95 LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLE---DVRLVHRDLAARNVL 151
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-----TIGYMAPEYGREGRVSANGDVYSFG 449
+ ++DFG+A+ + + +T+ A I +MA E R + DV+S+G
Sbjct: 152 VKSPNHVKITDFGLARLLD---IDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYG 208
Query: 450 IMLMK--TFIGKKPTDEIFNEEM 470
+ + + TF G KP D I E+
Sbjct: 209 VTVWELMTF-GAKPYDGIPAREI 230
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N+L
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFXEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 455 TFIGKKP 461
G P
Sbjct: 231 MAAGYPP 237
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAK----TGEDQSMTQTQTLATIG 427
L+YMH SA VIH D+K +N+L+++N + DFG+A+ + + T+ +AT
Sbjct: 171 LKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 227
Query: 428 YMAPE 432
Y APE
Sbjct: 228 YRAPE 232
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIA---KTGEDQSMTQTQTLA-TI 426
LE++H +I+ D+K NVLLDD+ +SD G+A K G+ T+T+ A T
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ----TKTKGYAGTP 353
Query: 427 GYMAPE--YGREGRVSANGDVYSFGIMLMKTFIGKKP 461
G+MAPE G E S D ++ G+ L + + P
Sbjct: 354 GFMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE---DQSMTQTQTLATIG 427
L+Y+H SA V+H D+K +N+LL+ + DFG+A+ + D + T+ +AT
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 428 YMAPEYGREGR-VSANGDVYSFGIMLMK------TFIGKKPTDEI 465
Y APE + + + D++S G +L + F GK D++
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 237
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE---DQSMTQTQTLATIG 427
L+Y+H SA V+H D+K +N+LL+ + DFG+A+ + D + T+ +AT
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 428 YMAPEYGREGR-VSANGDVYSFGIMLMK------TFIGKKPTDEI 465
Y APE + + + D++S G +L + F GK D++
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 237
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE---DQSMTQTQTLATIG 427
L+Y+H SA V+H D+K +N+LL+ + DFG+A+ + D + T+ +AT
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 428 YMAPEYGREGR-VSANGDVYSFGIMLMK------TFIGKKPTDEI 465
Y APE + + + D++S G +L + F GK D++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 241
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIA---KTGEDQSMTQTQTLA-TI 426
LE++H +I+ D+K NVLLDD+ +SD G+A K G+ T+T+ A T
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ----TKTKGYAGTP 353
Query: 427 GYMAPE--YGREGRVSANGDVYSFGIMLMKTFIGKKP 461
G+MAPE G E S D ++ G+ L + + P
Sbjct: 354 GFMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 74/177 (41%), Gaps = 24/177 (13%)
Query: 292 LRTIFMIVVILLILRCRKRGKRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYS 351
L+ +F V I+ +L N NI + E+ L++EY G + YL +
Sbjct: 57 LQKLFREVRIMKVL----------NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA 106
Query: 352 GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT 411
+ R + A++Y H + ++H D+KA N+LLD +M ++DFG +
Sbjct: 107 HGRMKEKEARA-KFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS-- 160
Query: 412 GEDQSMTQTQTLATI----GYMAPEYGREGRVSA-NGDVYSFGIMLMKTFIGKKPTD 463
T L T Y APE + + DV+S G++L G P D
Sbjct: 161 ---NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE---DQSMTQTQTLATIG 427
L+Y+H SA V+H D+K +N+LL+ + DFG+A+ + D + T+ +AT
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 428 YMAPEYGREGR-VSANGDVYSFGIMLMK------TFIGKKPTDEI 465
Y APE + + + D++S G +L + F GK D++
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 237
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 74/177 (41%), Gaps = 24/177 (13%)
Query: 292 LRTIFMIVVILLILRCRKRGKRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYS 351
L+ +F V I+ +L N NI + E+ L++EY G + YL +
Sbjct: 57 LQKLFREVRIMKVL----------NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA 106
Query: 352 GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT 411
+ R + A++Y H + ++H D+KA N+LLD +M ++DFG +
Sbjct: 107 HGRMKEKEARA-KFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS-- 160
Query: 412 GEDQSMTQTQTLATI----GYMAPEYGREGRVSA-NGDVYSFGIMLMKTFIGKKPTD 463
T L T Y APE + + DV+S G++L G P D
Sbjct: 161 ---NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE---DQSMTQTQTLATIG 427
L+Y+H SA V+H D+K +N+LL+ + DFG+A+ + D + T+ +AT
Sbjct: 134 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 428 YMAPEYGREGR-VSANGDVYSFGIMLMK------TFIGKKPTDEI 465
Y APE + + + D++S G +L + F GK D++
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 235
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIA---KTGEDQSMTQTQTLA-TI 426
LE++H +I+ D+K NVLLDD+ +SD G+A K G+ T+T+ A T
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ----TKTKGYAGTP 353
Query: 427 GYMAPE--YGREGRVSANGDVYSFGIMLMKTFIGKKP 461
G+MAPE G E S D ++ G+ L + + P
Sbjct: 354 GFMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE---DQSMTQTQTLATIG 427
L+Y+H SA V+H D+K +N+LL+ + DFG+A+ + D + T+ +AT
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 428 YMAPEYGREGR-VSANGDVYSFGIMLMK------TFIGKKPTDEI 465
Y APE + + + D++S G +L + F GK D++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 241
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE---DQSMTQTQTLATIG 427
L+Y+H SA V+H D+K +N+LL+ + DFG+A+ + D + T+ +AT
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 428 YMAPEYGREGR-VSANGDVYSFGIMLMK------TFIGKKPTDEI 465
Y APE + + + D++S G +L + F GK D++
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 237
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE---DQSMTQTQTLATIG 427
L+Y+H SA V+H D+K +N+LL+ + DFG+A+ + D + T+ +AT
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 428 YMAPEYGREGR-VSANGDVYSFGIMLMK------TFIGKKPTDEI 465
Y APE + + + D++S G +L + F GK D++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 241
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE---DQSMTQTQTLATIG 427
L+Y+H SA V+H D+K +N+LL+ + DFG+A+ + D + T+ +AT
Sbjct: 156 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 428 YMAPEYGREGR-VSANGDVYSFGIMLMK------TFIGKKPTDEI 465
Y APE + + + D++S G +L + F GK D++
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 257
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N++
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLM 173
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG+AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 174 IDQQGYIQVTDFGLAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 455 TFIGKKP 461
G P
Sbjct: 231 MAAGYPP 237
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 15/90 (16%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAK------------TGEDQSMTQTQTLATIGYMA 430
VIH D+K +N+L++ N + DFG+A+ TG+ M T+ +AT Y A
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM--TEYVATRWYRA 190
Query: 431 PEYG-REGRVSANGDVYSFGIMLMKTFIGK 459
PE + S DV+S G +L + F+ +
Sbjct: 191 PEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE---DQSMTQTQTLATIG 427
L+Y+H SA V+H D+K +N+LL+ + DFG+A+ + D + T+ +AT
Sbjct: 141 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 197
Query: 428 YMAPEYGREGR-VSANGDVYSFGIMLMK------TFIGKKPTDEI 465
Y APE + + + D++S G +L + F GK D++
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 242
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE---DQSMTQTQTLATIG 427
L+Y+H SA V+H D+K +N+LL+ + DFG+A+ + D + T+ +AT
Sbjct: 142 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 198
Query: 428 YMAPEYGREGR-VSANGDVYSFGIMLMK------TFIGKKPTDEI 465
Y APE + + + D++S G +L + F GK D++
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 243
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE---DQSMTQTQTLATIG 427
L+Y+H SA V+H D+K +N+LL+ + DFG+A+ + D + T+ +AT
Sbjct: 133 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 189
Query: 428 YMAPEYGREGR-VSANGDVYSFGIMLMK------TFIGKKPTDEI 465
Y APE + + + D++S G +L + F GK D++
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 234
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE---DQSMTQTQTLATIG 427
L+Y+H SA V+H D+K +N+LL+ + DFG+A+ + D + T+ +AT
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 428 YMAPEYGREGR-VSANGDVYSFGIMLMK------TFIGKKPTDEI 465
Y APE + + + D++S G +L + F GK D++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 241
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIA---KTGEDQSMTQTQTLA-TI 426
LE++H +I+ D+K NVLLDD+ +SD G+A K G+ T+T+ A T
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ----TKTKGYAGTP 353
Query: 427 GYMAPE--YGREGRVSANGDVYSFGIMLMKTFIGKKP 461
G+MAPE G E S D ++ G+ L + + P
Sbjct: 354 GFMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAK----TGEDQSMTQTQTLATIG 427
L+YMH SA VIH D+K +N+L+++N + DFG+A+ + + T+ +AT
Sbjct: 172 LKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 228
Query: 428 YMAPE 432
Y APE
Sbjct: 229 YRAPE 233
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE---DQSMTQTQTLATIG 427
L+Y+H SA V+H D+K +N+LL+ + DFG+A+ + D + T+ +AT
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 428 YMAPEYGREGR-VSANGDVYSFGIMLMK------TFIGKKPTDEI 465
Y APE + + + D++S G +L + F GK D++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 241
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE---DQSMTQTQTLATIG 427
L+Y+H SA V+H D+K +N+LL+ + DFG+A+ + D + T+ +AT
Sbjct: 134 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 428 YMAPEYGREGR-VSANGDVYSFGIMLMK------TFIGKKPTDEI 465
Y APE + + + D++S G +L + F GK D++
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 235
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 27/164 (16%)
Query: 312 KRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQR--LNSMIDVA 369
++ S NI + + F L+ + G L YL + R + ++++V
Sbjct: 65 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 124
Query: 370 LALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYM 429
AL ++ ++H D+K N+LLDD+M L+DFG + D + T Y+
Sbjct: 125 CALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLREVCGTPSYL 177
Query: 430 APE------------YGREGRVSANGDVYSFGIMLMKTFIGKKP 461
APE YG+E D++S G+++ G P
Sbjct: 178 APEIIECSMNDNHPGYGKE------VDMWSTGVIMYTLLAGSPP 215
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE---DQSMTQTQTLATIG 427
L+Y+H SA V+H D+K +N+LL+ + DFG+A+ + D + T+ +AT
Sbjct: 138 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 428 YMAPEYGREGR-VSANGDVYSFGIMLMK------TFIGKKPTDEI 465
Y APE + + + D++S G +L + F GK D++
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 239
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE---DQSMTQTQTLATIG 427
L+Y+H SA V+H D+K +N+LL+ + DFG+A+ + D + T+ +AT
Sbjct: 144 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 200
Query: 428 YMAPEYGREGR-VSANGDVYSFGIMLMK------TFIGKKPTDEI 465
Y APE + + + D++S G +L + F GK D++
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 245
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE---DQSMTQTQTLATIG 427
L+Y+H SA V+H D+K +N+LL+ + DFG+A+ + D + T+ +AT
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 428 YMAPEYGREGR-VSANGDVYSFGIMLMK------TFIGKKPTDEI 465
Y APE + + + D++S G +L + F GK D++
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 237
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE---DQSMTQTQTLATIG 427
L+Y+H SA V+H D+K +N+LL+ + DFG+A+ + D + T+ +AT
Sbjct: 138 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 428 YMAPEYGREGR-VSANGDVYSFGIMLMK------TFIGKKPTDEI 465
Y APE + + + D++S G +L + F GK D++
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 239
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE---DQSMTQTQTLATIG 427
L+Y+H SA V+H D+K +N+LL+ + DFG+A+ + D + T+ +AT
Sbjct: 156 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 428 YMAPEYGREGR-VSANGDVYSFGIMLMK------TFIGKKPTDEI 465
Y APE + + + D++S G +L + F GK D++
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 257
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 23/146 (15%)
Query: 317 DANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALE--- 373
D S +S S + + +E+ G+LE++ I +R +D LALE
Sbjct: 79 DPETSSKNSSRSKTKCLFIQMEFCDKGTLEQW---------IEKRRGEKLDKVLALELFE 129
Query: 374 -------YMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
Y+H S +I+ D+K +N+ L D + DFG+ T + ++ T+
Sbjct: 130 QITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLV-TSLKNDGKRXRSKGTL 185
Query: 427 GYMAPEYGREGRVSANGDVYSFGIML 452
YM+PE D+Y+ G++L
Sbjct: 186 RYMSPEQISSQDYGKEVDLYALGLIL 211
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N+L
Sbjct: 111 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLL 166
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 167 IDQQGYIQVTDFGFAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 223
Query: 455 TFIGKKP 461
G P
Sbjct: 224 MAAGYPP 230
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 74/177 (41%), Gaps = 24/177 (13%)
Query: 292 LRTIFMIVVILLILRCRKRGKRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYS 351
L+ +F V I+ +L N NI + E+ L++EY G + YL +
Sbjct: 57 LQKLFREVRIMKVL----------NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA 106
Query: 352 GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT 411
+ R + A++Y H + ++H D+KA N+LLD +M ++DFG +
Sbjct: 107 HGRMKEKEARA-KFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS-- 160
Query: 412 GEDQSMTQTQTLATI----GYMAPEYGREGRVSA-NGDVYSFGIMLMKTFIGKKPTD 463
T L T Y APE + + DV+S G++L G P D
Sbjct: 161 ---NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 365 MIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTG-EDQSMTQTQTL 423
+ ++++AL ++H +I+ D+K N++L+ L+DFG+ K D ++T T
Sbjct: 127 LAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT-FC 182
Query: 424 ATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
TI YMAPE + D +S G ++ G P
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 18/119 (15%)
Query: 351 SGNCSLDIFQR---LNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFG 407
+G C+++ +R L+ + +A A+E++H S ++H D+K +N+ + V + DFG
Sbjct: 107 NGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFG 163
Query: 408 IA----KTGEDQSM--------TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+ + E+Q++ T + T YM+PE S D++S G++L +
Sbjct: 164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFE 222
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 27/164 (16%)
Query: 312 KRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQR--LNSMIDVA 369
++ S NI + + F L+ + G L YL + R + ++++V
Sbjct: 78 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 137
Query: 370 LALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYM 429
AL ++ ++H D+K N+LLDD+M L+DFG + D + T Y+
Sbjct: 138 CALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLREVCGTPSYL 190
Query: 430 APE------------YGREGRVSANGDVYSFGIMLMKTFIGKKP 461
APE YG+E D++S G+++ G P
Sbjct: 191 APEIIECSMNDNHPGYGKE------VDMWSTGVIMYTLLAGSPP 228
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N+L
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 455 TFIGKKP 461
G P
Sbjct: 231 MAAGYPP 237
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 24/142 (16%)
Query: 334 ALILEYKPHGSL-EKYLYSGNCSLD----IFQRLNSMIDVALALEYMHFGYSAPVIHCDI 388
A+++EY G L E+ +G S D FQ+L S + A++ V H D+
Sbjct: 91 AIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ---------VCHRDL 141
Query: 389 KANNVLLDDNMVAHLS--DFGIAKTGEDQSMTQTQTLATIGYMAPEY----GREGRVSAN 442
K N LLD + L FG +K+ S + T+ T Y+APE +G+V+
Sbjct: 142 KLENTLLDGSPAPRLKICAFGYSKSSVLHSQPK-DTVGTPAYIAPEVLLKKEYDGKVA-- 198
Query: 443 GDVYSFGIMLMKTFIGKKPTDE 464
DV+S G+ L +G P ++
Sbjct: 199 -DVWSCGVTLYVMLVGAYPFED 219
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI + P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 100 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 156
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG AK E++ I +MA E + DV+S+G+ +
Sbjct: 157 VKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 216
Query: 453 MK--TFIGKKPTDEIFNEEMT 471
+ TF G KP D I E++
Sbjct: 217 WELMTF-GSKPYDGIPASEIS 236
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N+L
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 455 TFIGKKP 461
G P
Sbjct: 232 MAAGYPP 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N+L
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 455 TFIGKKP 461
G P
Sbjct: 231 MAAGYPP 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N+L
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 455 TFIGKKP 461
G P
Sbjct: 231 MAAGYPP 237
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N+L
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 455 TFIGKKP 461
G P
Sbjct: 232 MAAGYPP 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N++
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFXEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLM 174
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 175 IDQQGYIKVTDFGFAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 455 TFIGKKP 461
G P
Sbjct: 232 MAAGYPP 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N++
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFXEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLM 173
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 174 IDQQGYIKVTDFGFAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 455 TFIGKKP 461
G P
Sbjct: 231 MAAGYPP 237
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N+L
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 455 TFIGKKP 461
G P
Sbjct: 232 MAAGYPP 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N+L
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 455 TFIGKKP 461
G P
Sbjct: 232 MAAGYPP 238
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N++
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLM 173
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG+AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 174 IDQQGYIKVTDFGLAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 455 TFIGKKP 461
G P
Sbjct: 231 MAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N+L
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 455 TFIGKKP 461
G P
Sbjct: 231 MAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N+L
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 455 TFIGKKP 461
G P
Sbjct: 231 MAAGYPP 237
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
LI + P G L Y+ ++ LN + +A + Y+ ++H D+ A NVL
Sbjct: 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 149
Query: 395 LDDNMVAHLSDFGIAK--TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ ++DFG AK E++ I +MA E + DV+S+G+ +
Sbjct: 150 VKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 209
Query: 453 MK--TFIGKKPTDEIFNEEMT 471
+ TF G KP D I E++
Sbjct: 210 WELMTF-GSKPYDGIPASEIS 229
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N+L
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 455 TFIGKKP 461
G P
Sbjct: 231 MAAGYPP 237
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N+L
Sbjct: 139 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLL 194
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 195 IDQQGYIQVTDFGFAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 251
Query: 455 TFIGKKP 461
G P
Sbjct: 252 MAAGYPP 258
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE---DQSMTQTQTLATIG 427
L+Y+H SA V+H D+K +N+LL+ + DFG+A+ + D + T+ +AT
Sbjct: 138 GLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 428 YMAPEYGREGR-VSANGDVYSFGIMLMK------TFIGKKPTDEI 465
Y APE + + + D++S G +L + F GK D++
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 239
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N++
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLM 173
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 455 TFIGKKP 461
G P
Sbjct: 231 MAAGYPP 237
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
LE ++F +S +IH D+KA NVL+ L+DFG++ + + T +MAP
Sbjct: 127 LEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAP 186
Query: 432 EY-----GREGRVSANGDVYSFGIMLMKTFIGKKPTDEI 465
E ++ D++S GI L++ + P E+
Sbjct: 187 EVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 225
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
LE ++F +S +IH D+KA NVL+ L+DFG++ + + T +MAP
Sbjct: 119 LEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAP 178
Query: 432 EY-----GREGRVSANGDVYSFGIMLMKTFIGKKPTDEI 465
E ++ D++S GI L++ + P E+
Sbjct: 179 EVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 217
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH---FGYSA-PVI-HCDIK 389
LI Y HGSL +L + RL + A L ++H FG P I H D K
Sbjct: 83 LITHYHEHGSLYDFLQRQTLEPHLALRL--AVSAACGLAHLHVEIFGTQGKPAIAHRDFK 140
Query: 390 ANNVLLDDNMVAHLSDFGIA---KTGEDQ-SMTQTQTLATIGYMAPEYGREGRVSAN--- 442
+ NVL+ N+ ++D G+A G D + + T YMAPE E ++ +
Sbjct: 141 SRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDE-QIRTDCFE 199
Query: 443 ----GDVYSFGIMLMK 454
D+++FG++L +
Sbjct: 200 SYKWTDIWAFGLVLWE 215
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N+L
Sbjct: 118 MVMEYMPGGDMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 174 IDQQGYIKVADFGFAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 455 TFIGKKP 461
G P
Sbjct: 231 MAAGYPP 237
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N+L
Sbjct: 118 MVMEYMPGGDMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 174 IDQQGYIKVADFGFAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 455 TFIGKKP 461
G P
Sbjct: 231 MAAGYPP 237
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N+L
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 174 IDQQGYIKVADFGFAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 455 TFIGKKP 461
G P
Sbjct: 231 MAAGYPP 237
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 22/176 (12%)
Query: 292 LRTIFMIVVILLILRCRKRGKRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYS 351
L+ +F V I+ +L N NI + E+ L++EY G + YL +
Sbjct: 57 LQKLFREVRIMKVL----------NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA 106
Query: 352 GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT 411
+ R + A++Y H + ++H D+KA N+LLD +M ++DFG +
Sbjct: 107 HGRMKEKEARA-KFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS-- 160
Query: 412 GEDQSMTQTQTLATIG---YMAPEYGREGRVSA-NGDVYSFGIMLMKTFIGKKPTD 463
++ + A G Y APE + + DV+S G++L G P D
Sbjct: 161 --NEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+Y+H SA +IH D+K +NV ++++ + DFG+A+ D+ MT GY+A
Sbjct: 136 LKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQA-DEEMT--------GYVAT 183
Query: 432 EYGREGRVSANG-------DVYSFGIMLMKTFIGK 459
+ R + N D++S G ++ + GK
Sbjct: 184 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N++
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLM 173
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 174 IDQQGYIKVTDFGFAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 455 TFIGKKP 461
G P
Sbjct: 231 MAAGYPP 237
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N++
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLM 174
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 175 IDQQGYIKVTDFGFAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 455 TFIGKKP 461
G P
Sbjct: 232 MAAGYPP 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N++
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLM 174
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 175 IDQQGYIKVTDFGFAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 455 TFIGKKP 461
G P
Sbjct: 232 MAAGYPP 238
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Query: 365 MIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA 424
+ ++++AL ++H +I+ D+K N++L+ L+DFG+ K
Sbjct: 127 LAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCG 183
Query: 425 TIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
TI YMAPE + D +S G ++ G P
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+++EY P G + +L + R + + L EY+H S +I+ D+K N++
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLM 174
Query: 395 LDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+D ++DFG AK + ++ T Y+APE + D ++ G+++ +
Sbjct: 175 IDQQGYIKVTDFGFAKRVKGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 455 TFIGKKP 461
G P
Sbjct: 232 MAAGYPP 238
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S T + T Y APE
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 439 VSANGDVYSFGIMLMKTFIG 458
N D++S G+++ + G
Sbjct: 202 YKENVDIWSVGVIMGEMIKG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S T + T Y APE
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 439 VSANGDVYSFGIMLMKTFIG 458
N D++S G+++ + G
Sbjct: 202 YKENVDIWSVGVIMGEMIKG 221
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 27/164 (16%)
Query: 312 KRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQR--LNSMIDVA 369
++ S NI + + F L+ + G L YL + R + ++++V
Sbjct: 78 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 137
Query: 370 LALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYM 429
AL ++ ++H D+K N+LLDD+M L+DFG + D T Y+
Sbjct: 138 CALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLRSVCGTPSYL 190
Query: 430 APE------------YGREGRVSANGDVYSFGIMLMKTFIGKKP 461
APE YG+E D++S G+++ G P
Sbjct: 191 APEIIECSMNDNHPGYGKE------VDMWSTGVIMYTLLAGSPP 228
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 19/96 (19%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +NV ++++ + DFG+A+ D+ MT GY+A
Sbjct: 143 GLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQA-DEEMT--------GYVA 190
Query: 431 PEYGREGRVSANG-------DVYSFGIMLMKTFIGK 459
+ R + N D++S G ++ + GK
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 14/143 (9%)
Query: 366 IDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLAT 425
+ + ALE++H S VIH D+K +NVL++ + DFGI+ D + +
Sbjct: 116 VSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVD-DVAKDIDAGC 172
Query: 426 IGYMAPEY-----GREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWL 480
YMAPE ++G S D++S GI +++ I + P D LK V +
Sbjct: 173 KPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS 231
Query: 481 PISIMEVIDANLLSREDIHFVAK 503
P + A+ S E + F ++
Sbjct: 232 P-----QLPADKFSAEFVDFTSQ 249
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F + ++H D+K N+L++ L DFG+A+ T + + T+ Y AP
Sbjct: 118 LQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAP 177
Query: 432 EYGREGRV-SANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLK 473
+ R S + D++S G +L + G KP N+E LK
Sbjct: 178 DVLMGSRTYSTSIDIWSCGCILAEMITG-KPLFPGTNDEEQLK 219
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y AP
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 191
Query: 432 EYGREG-RVSANGDVYSFGIMLMKTFIGK 459
E + D++S G ++ + G+
Sbjct: 192 EIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSAN 442
+ H D+K +N+L+D N LSDFG ++ D+ + ++ T +M PE+ S N
Sbjct: 173 ICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSR--GTYEFMPPEFF-SNESSYN 229
Query: 443 G---DVYSFGIMLMKTFIGKKP 461
G D++S GI L F P
Sbjct: 230 GAKVDIWSLGICLYVMFYNVVP 251
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 19/95 (20%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+Y+H SA +IH D+K +NV ++++ + DFG+A+ D+ MT GY+A
Sbjct: 144 LKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQA-DEEMT--------GYVAT 191
Query: 432 EYGREGRVSANG-------DVYSFGIMLMKTFIGK 459
+ R + N D++S G ++ + GK
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 7/109 (6%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+ ++F + IH D+K N+L+ + V L DFG A+ S +AT Y +
Sbjct: 111 TLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRS 170
Query: 431 PE-------YGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTL 472
PE YG V A G V++ + + + GK D+++ TL
Sbjct: 171 PELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTL 219
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T M T + T Y APE
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMM-TPYVVTRYYRAPEVILGMG 201
Query: 439 VSANGDVYSFGIML 452
+AN D++S G ++
Sbjct: 202 YAANVDIWSVGCIM 215
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGXVATRWYRA 190
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 16/173 (9%)
Query: 292 LRTIFMIVVILLILRCRKRGKRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYLYS 351
L+ +F V I+ +L N NI + E+ L++EY G + YL +
Sbjct: 57 LQKLFREVRIMKVL----------NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA 106
Query: 352 GNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT 411
+ R + A++Y H + ++H D+KA N+LLD +M ++DFG +
Sbjct: 107 HGRMKEKEARA-KFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNE 162
Query: 412 GEDQSMTQTQTLATIGYMAPEYGREGRVSA-NGDVYSFGIMLMKTFIGKKPTD 463
+ + + Y APE + + DV+S G++L G P D
Sbjct: 163 FTFGNKLD-EFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 13/105 (12%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE---DQSMTQTQTLATIG 427
L+Y+H SA V+H D+K +N+LL+ + DFG+A+ + D + + +AT
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 196
Query: 428 YMAPEYGREGR-VSANGDVYSFGIMLMK------TFIGKKPTDEI 465
Y APE + + + D++S G +L + F GK D++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 241
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 13/105 (12%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE---DQSMTQTQTLATIG 427
L+Y+H SA V+H D+K +N+LL+ + DFG+A+ + D + + +AT
Sbjct: 141 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 197
Query: 428 YMAPEYGREGR-VSANGDVYSFGIMLMK------TFIGKKPTDEI 465
Y APE + + + D++S G +L + F GK D++
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 242
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 171
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 219
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
Query: 345 LEKYLYSGNCSLDIFQRLNSMIDVAL----ALEYMHFGYSAPVIHCDIKANNVLLDDNMV 400
+E L S + L++ ++ +++A AL+ + + +S +IH D+KA N+LL + +
Sbjct: 94 MEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGL 153
Query: 401 AHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEY---GREGRVSANGDVYSFGIMLMKTFI 457
L DFG A + T +MAPE EG+ DV+S GI ++
Sbjct: 154 VKLGDFGSASI----MAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 209
Query: 458 GKKP 461
K P
Sbjct: 210 RKPP 213
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 223
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
Query: 345 LEKYLYSGNCSLDIFQRLNSMIDVAL----ALEYMHFGYSAPVIHCDIKANNVLLDDNMV 400
+E L S + L++ ++ +++A AL+ + + +S +IH D+KA N+LL + +
Sbjct: 133 MEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGL 192
Query: 401 AHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEY---GREGRVSANGDVYSFGIMLMKTFI 457
L DFG A + T +MAPE EG+ DV+S GI ++
Sbjct: 193 VKLGDFGSASI----MAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 248
Query: 458 GKKP 461
K P
Sbjct: 249 RKPP 252
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH---FGYSA-PVI-HCDIK 389
LI Y GSL YL +LD L ++ +A L ++H FG P I H D+K
Sbjct: 83 LITHYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLK 140
Query: 390 ANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQT-----LATIGYMAPEYGREG-RVSA-- 441
+ N+L+ N ++D G+A QS Q + T YMAPE E +V
Sbjct: 141 SKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFD 199
Query: 442 ---NGDVYSFGIMLMK 454
D+++FG++L +
Sbjct: 200 SYKRVDIWAFGLVLWE 215
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 173
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 221
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH---FGYSA-PVI-HCDIK 389
LI Y GSL YL +LD L ++ +A L ++H FG P I H D+K
Sbjct: 83 LITHYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLK 140
Query: 390 ANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQT-----LATIGYMAPEYGREG-RVSA-- 441
+ N+L+ N ++D G+A QS Q + T YMAPE E +V
Sbjct: 141 SKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFD 199
Query: 442 ---NGDVYSFGIMLMK 454
D+++FG++L +
Sbjct: 200 SYKRVDIWAFGLVLWE 215
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGE---DQSMTQTQTLATIG 427
L+Y+H SA V+H D+K +N+L++ + DFG+A+ + D + T+ +AT
Sbjct: 156 GLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRW 212
Query: 428 YMAPEYGREGR-VSANGDVYSFGIMLMK------TFIGKKPTDEI 465
Y APE + + + D++S G +L + F GK D++
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 257
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 223
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 223
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 222
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 117 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 176
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 224
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 222
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 223
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH---FGYSA-PVI-HCDIK 389
LI Y GSL YL +LD L ++ +A L ++H FG P I H D+K
Sbjct: 112 LITHYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLK 169
Query: 390 ANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQT-----LATIGYMAPEYGREG-RVSA-- 441
+ N+L+ N ++D G+A QS Q + T YMAPE E +V
Sbjct: 170 SKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFD 228
Query: 442 ---NGDVYSFGIMLMK 454
D+++FG++L +
Sbjct: 229 SYKRVDIWAFGLVLWE 244
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 383 VIHCDIKANNVLLDDNM---VAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRV 439
V+H D+K N+LL + L+DFG+A E + T GY++PE R+
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 201
Query: 440 SANGDVYSFGIMLMKTFIGKKP 461
D+++ G++L +G P
Sbjct: 202 GKPVDLWACGVILYILLVGYPP 223
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 222
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 171
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 219
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 17/117 (14%)
Query: 365 MIDVALALEYMHF-GYSAPVIHCDIKANNVLLDDNMVAHLSDFG------IAKTGEDQSM 417
++ + LE +H GY+ H D+K N+LL D L D G I G Q++
Sbjct: 140 LLGICRGLEAIHAKGYA----HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQAL 195
Query: 418 TQTQTLA---TIGYMAPE---YGREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNE 468
T A TI Y APE + DV+S G +L G+ P D +F +
Sbjct: 196 TLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK 252
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L + F ++ ++H D+K N+L+ L+DFG+A+ Q M + T+ Y AP
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ-MALAPVVVTLWYRAP 180
Query: 432 EYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
E + + D++S G + + F +KP
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMF-RRKP 209
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 173
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 221
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 142 GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE---MTGYVATRWYRA 195
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y AP
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE---MTGYVATRWYRAP 191
Query: 432 EYGREG-RVSANGDVYSFGIMLMKTFIGK 459
E + D++S G ++ + G+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 114 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 173
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 221
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 116 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 223
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 142 GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE---MTGYVATRWYRA 195
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 133 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 186
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 113 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 142 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 195
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 115 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 222
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 114 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 173
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 221
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 134 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 187
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 134 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 187
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 190
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 190
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 142 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 195
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 135 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 188
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 136 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 189
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 190 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+ L EY+H S +I+ D+K N+L+D+ ++DFG AK + ++ T
Sbjct: 137 IVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWX---LCGTPE 190
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D ++ G+++ + G P
Sbjct: 191 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+ + F +S V+H D+K N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 432 EYGREGRVSANG-DVYSFGIMLMKT------FIGKKPTDEIFNEEMTL 472
E + + D++S G + + F G D++F TL
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 223
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 190
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 365 MIDVALALEYMHFGYSAPVIHCDIKANNVLL---DDNMVAHLSDFGIAKTGEDQSMTQTQ 421
M + A+ +MH V+H D+K N+L +DN+ + DFG A+ +
Sbjct: 112 MRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT 168
Query: 422 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
T+ Y APE + + D++S G++L G+ P
Sbjct: 169 PCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 190
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 148 GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE---MTGYVATRWYRA 201
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 190
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 329 NEEFKALILEYKPHG--SLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH-FGYSAPVIH 385
+E + L+L+Y P + ++ +L + M + +L Y+H FG + H
Sbjct: 91 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG----ICH 146
Query: 386 CDIKANNVLLD-DNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPE--YGREGRV 439
DIK N+LLD D V L DFG AK GE + + Y APE +G
Sbjct: 147 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSXICSRYYRAPELIFGATDYT 202
Query: 440 SANGDVYSFGIMLMKTFIGK 459
S+ DV+S G +L + +G+
Sbjct: 203 SSI-DVWSAGCVLAELLLGQ 221
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y AP
Sbjct: 134 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 187
Query: 432 EYGREG-RVSANGDVYSFGIMLMKTFIGK 459
E + D++S G ++ + G+
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 329 NEEFKALILEYKPHG--SLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH-FGYSAPVIH 385
+E + L+L+Y P + ++ +L + M + +L Y+H FG + H
Sbjct: 90 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG----ICH 145
Query: 386 CDIKANNVLLD-DNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPE--YGREGRV 439
DIK N+LLD D V L DFG AK GE + + Y APE +G
Sbjct: 146 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSXICSRYYRAPELIFGATDYT 201
Query: 440 SANGDVYSFGIMLMKTFIGK 459
S+ DV+S G +L + +G+
Sbjct: 202 SSI-DVWSAGCVLAELLLGQ 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y AP
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 191
Query: 432 EYGREG-RVSANGDVYSFGIMLMKTFIGK 459
E + D++S G ++ + G+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 143 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 196
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y AP
Sbjct: 148 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 201
Query: 432 EYGREG-RVSANGDVYSFGIMLMKTFIGK 459
E + D++S G ++ + G+
Sbjct: 202 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 190
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 139 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 192
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y AP
Sbjct: 145 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 198
Query: 432 EYGREG-RVSANGDVYSFGIMLMKTFIGK 459
E + D++S G ++ + G+
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 139 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 192
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y AP
Sbjct: 134 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 187
Query: 432 EYGREG-RVSANGDVYSFGIMLMKTFIGK 459
E + D++S G ++ + G+
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 329 NEEFKALILEYKPHG--SLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH-FGYSAPVIH 385
+E + L+L+Y P + ++ +L + M + +L Y+H FG + H
Sbjct: 90 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG----ICH 145
Query: 386 CDIKANNVLLD-DNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPE--YGREGRV 439
DIK N+LLD D V L DFG AK GE + + Y APE +G
Sbjct: 146 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSXICSRYYRAPELIFGATDYT 201
Query: 440 SANGDVYSFGIMLMKTFIGK 459
S+ DV+S G +L + +G+
Sbjct: 202 SSI-DVWSAGCVLAELLLGQ 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 139 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 192
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 190
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEY-GREGRVSA 441
++H D+K N+L++ + L+DFG+A+ + T + T+ Y AP+ + S
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYST 199
Query: 442 NGDVYSFGIMLMKTFIGK 459
+ D++S G + + GK
Sbjct: 200 SVDIWSIGCIFAEMITGK 217
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S T + T Y APE
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPEVVTRYYRAPEVILGMG 201
Query: 439 VSANGDVYSFGIMLMKTFIG 458
N D++S G ++ + G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEY--GREGRVS 440
++H D+K N+L++ + L+DFG+A+ + T + T+ Y AP+ G + + S
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK-KYS 198
Query: 441 ANGDVYSFGIMLMKTFIGK 459
+ D++S G + + GK
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 149 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 202
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 160 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 213
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 156 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 209
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 149 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 202
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 149 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 202
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+ L EY+H S +I+ D+K N+L+D ++DFG AK + + T T
Sbjct: 171 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT---LCGTPE 224
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D ++ G+++ + G P
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 156 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 209
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y AP
Sbjct: 144 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 197
Query: 432 EYGREG-RVSANGDVYSFGIMLMKTFIGK 459
E + D++S G ++ + G+
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 329 NEEFKALILEYKPHG--SLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH-FGYSAPVIH 385
+E + L+L+Y P + ++ +L + M + +L Y+H FG + H
Sbjct: 98 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG----ICH 153
Query: 386 CDIKANNVLLD-DNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPE--YGREGRV 439
DIK N+LLD D V L DFG AK GE + + Y APE +G
Sbjct: 154 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSXICSRYYRAPELIFGATDYT 209
Query: 440 SANGDVYSFGIMLMKTFIGK 459
S+ DV+S G +L + +G+
Sbjct: 210 SSI-DVWSAGCVLAELLLGQ 228
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 157 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 210
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 15/90 (16%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAK------------TGEDQSMTQTQTLATIGYMA 430
VIH D+K +N+L++ N + DFG+A+ TG+ M + +AT Y A
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM--VEFVATRWYRA 190
Query: 431 PEYG-REGRVSANGDVYSFGIMLMKTFIGK 459
PE + S DV+S G +L + F+ +
Sbjct: 191 PEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 148 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 201
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 157 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 210
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y AP
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 191
Query: 432 EYGREG-RVSANGDVYSFGIMLMKTFIGK 459
E + D++S G ++ + G+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 329 NEEFKALILEYKPHG--SLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH-FGYSAPVIH 385
+E + L+L+Y P + ++ +L + M + +L Y+H FG + H
Sbjct: 102 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG----ICH 157
Query: 386 CDIKANNVLLD-DNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPE--YGREGRV 439
DIK N+LLD D V L DFG AK GE + + Y APE +G
Sbjct: 158 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSXICSRYYRAPELIFGATDYT 213
Query: 440 SANGDVYSFGIMLMKTFIGK 459
S+ DV+S G +L + +G+
Sbjct: 214 SSI-DVWSAGCVLAELLLGQ 232
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 329 NEEFKALILEYKPHG--SLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH-FGYSAPVIH 385
+E + L+L+Y P + ++ +L + M + +L Y+H FG + H
Sbjct: 109 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG----ICH 164
Query: 386 CDIKANNVLLD-DNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPE--YGREGRV 439
DIK N+LLD D V L DFG AK GE + + Y APE +G
Sbjct: 165 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSXICSRYYRAPELIFGATDYT 220
Query: 440 SANGDVYSFGIMLMKTFIGK 459
S+ DV+S G +L + +G+
Sbjct: 221 SSI-DVWSAGCVLAELLLGQ 239
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L + F ++ ++H D+K N+L+ L+DFG+A+ Q M + T+ Y AP
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ-MALDPVVVTLWYRAP 180
Query: 432 EYGREGRVSANGDVYSFGIMLMKTFIGK 459
E + + D++S G + + F K
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y AP
Sbjct: 144 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAP 197
Query: 432 EYGREG-RVSANGDVYSFGIMLMKTFIGK 459
E + D++S G ++ + G+
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 143 GLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE---MTGYVATRWYRA 196
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 329 NEEFKALILEYKPHG--SLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH-FGYSAPVIH 385
+E + L+L+Y P + ++ +L + M + +L Y+H FG + H
Sbjct: 94 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG----ICH 149
Query: 386 CDIKANNVLLD-DNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPE--YGREGRV 439
DIK N+LLD D V L DFG AK GE + + Y APE +G
Sbjct: 150 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSXICSRYYRAPELIFGATDYT 205
Query: 440 SANGDVYSFGIMLMKTFIGK 459
S+ DV+S G +L + +G+
Sbjct: 206 SSI-DVWSAGCVLAELLLGQ 224
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 365 MIDVALALEYMHFGYSAPVIHCDIKANNVLLDD---NMVAHLSDFGIAKTGEDQSMTQTQ 421
M + A++Y+H S + H D+K N+L N + L+DFG AK + + T+
Sbjct: 121 MKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTE 176
Query: 422 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
T Y+APE + + D++S G+++ G P
Sbjct: 177 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 139 GLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE---MTGYVATRWYRA 192
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 63/146 (43%), Gaps = 7/146 (4%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFG 378
NI + S S E F L+ + G L + + + + ++ + LE ++
Sbjct: 91 NIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIHQILESVNHI 146
Query: 379 YSAPVIHCDIKANNVLLDDN---MVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGR 435
+ ++H D+K N+LL L+DFG+A + + T GY++PE R
Sbjct: 147 HQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLR 206
Query: 436 EGRVSANGDVYSFGIMLMKTFIGKKP 461
+ D+++ G++L +G P
Sbjct: 207 KDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 329 NEEFKALILEYKPHG--SLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH-FGYSAPVIH 385
+E + L+L+Y P + ++ +L + M + +L Y+H FG + H
Sbjct: 102 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG----ICH 157
Query: 386 CDIKANNVLLD-DNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPE--YGREGRV 439
DIK N+LLD D V L DFG AK GE + + Y APE +G
Sbjct: 158 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSXICSRYYRAPELIFGATDYT 213
Query: 440 SANGDVYSFGIMLMKTFIGK 459
S+ DV+S G +L + +G+
Sbjct: 214 SSI-DVWSAGCVLAELLLGQ 232
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ T +AT Y A
Sbjct: 166 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 219
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 220 PEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Query: 359 FQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL---DDNMVAHLSDFGIAKTGEDQ 415
F +++ + + L + + + ++H D+K N+LL + + + + DFG++ E+Q
Sbjct: 133 FNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192
Query: 416 SMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
+ + L T Y+APE R+ + DV+S G++L G P
Sbjct: 193 KKMK-ERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPP 236
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 18/136 (13%)
Query: 334 ALILEYKPHGSL-----EKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDI 388
+L+LE G L EK YS + D +++ LE + + + ++H D+
Sbjct: 124 SLVLELVTGGELFDRIVEKGYYSERDAADAVKQI---------LEAVAYLHENGIVHRDL 174
Query: 389 KANNVLLDD---NMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDV 445
K N+L + ++DFG++K E Q + +T T GY APE R D+
Sbjct: 175 KPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT-VCGTPGYCAPEILRGCAYGPEVDM 233
Query: 446 YSFGIMLMKTFIGKKP 461
+S GI+ G +P
Sbjct: 234 WSVGIITYILLCGFEP 249
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Query: 302 LLILRCRKRGK--RPSNDANISPVATSCSNEEFKAL--ILEYKPHGSLEKYLYSGNCSLD 357
L L+C K+ R S+ N V +E L I E H L L SG D
Sbjct: 36 LFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFD 95
Query: 358 ------IFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLL---DDNMVAHLSDFGI 408
++ ++ + + L + + + ++H D+K N+L ++N ++DFG+
Sbjct: 96 RILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGL 155
Query: 409 AKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
+K +Q+ + T GY+APE + S D +S G++ G P
Sbjct: 156 SKM--EQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S T + T Y APE
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 439 VSANGDVYSFGIMLMKTFIG 458
N D++S G ++ + G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 329 NEEFKALILEYKPHG--SLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH-FGYSAPVIH 385
+E + L+L+Y P + ++ +L + M + +L Y+H FG + H
Sbjct: 90 DEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG----ICH 145
Query: 386 CDIKANNVLLD-DNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPE--YGREGRV 439
DIK N+LLD D V L DFG AK GE + + Y APE +G
Sbjct: 146 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSXICSRYYRAPELIFGATDYT 201
Query: 440 SANGDVYSFGIMLMKTFIGK 459
S+ DV+S G +L + +G+
Sbjct: 202 SSI-DVWSAGCVLAELLLGQ 220
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S T + T Y APE
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMG 202
Query: 439 VSANGDVYSFGIMLMKTFIG 458
N D++S G ++ + G
Sbjct: 203 YKENVDIWSVGCIMGEMIKG 222
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S T + T Y APE
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 439 VSANGDVYSFGIMLMKTFIG 458
N D++S G ++ + G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S T + T Y APE
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 439 VSANGDVYSFGIMLMKTFIG 458
N D++S G ++ + G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 329 NEEFKALILEYKPHG--SLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH-FGYSAPVIH 385
+E + L+L+Y P + ++ +L + M + +L Y+H FG + H
Sbjct: 90 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG----ICH 145
Query: 386 CDIKANNVLLD-DNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPE--YGREGRV 439
DIK N+LLD D V L DFG AK GE + + Y APE +G
Sbjct: 146 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSYICSRYYRAPELIFGATDYT 201
Query: 440 SANGDVYSFGIMLMKTFIGK 459
S+ DV+S G +L + +G+
Sbjct: 202 SSI-DVWSAGCVLAELLLGQ 220
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S T + T Y APE
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 439 VSANGDVYSFGIML 452
N D++S G ++
Sbjct: 202 YKENVDIWSVGCIM 215
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 329 NEEFKALILEYKPHG--SLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH-FGYSAPVIH 385
+E + L+L+Y P + ++ +L + M + +L Y+H FG + H
Sbjct: 90 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG----ICH 145
Query: 386 CDIKANNVLLD-DNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPE--YGREGRV 439
DIK N+LLD D V L DFG AK GE + + Y APE +G
Sbjct: 146 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSYICSRYYRAPELIFGATDYT 201
Query: 440 SANGDVYSFGIMLMKTFIGK 459
S+ DV+S G +L + +G+
Sbjct: 202 SSI-DVWSAGCVLAELLLGQ 220
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S T + T Y APE
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 439 VSANGDVYSFGIMLMKTFIG 458
N D++S G ++ + G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLA-TI 426
+ L EY+H S +I+ D+K N+L+D ++DFG AK + +T LA T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLAGTP 202
Query: 427 GYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D ++ G+++ + G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 7/98 (7%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNM----VAHLSDFGIAKTGEDQSMTQTQTL 423
+ +EY+H S V+H D+K +N+L D + DFG AK ++
Sbjct: 130 IGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 424 ATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
T ++APE + D++S GI+L G P
Sbjct: 187 YTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S T + T Y APE
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 439 VSANGDVYSFGIMLMKTFIG 458
N D++S G ++ + G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 7/98 (7%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNM----VAHLSDFGIAKTGEDQSMTQTQTL 423
+ +EY+H S V+H D+K +N+L D + DFG AK ++
Sbjct: 130 IGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 424 ATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
T ++APE + D++S GI+L G P
Sbjct: 187 YTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 383 VIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEY-----GREG 437
VIH DIK NVLL +N L DFG++ + + + T +MAPE +
Sbjct: 150 VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDA 209
Query: 438 RVSANGDVYSFGIMLMKTFIGKKP 461
D++S GI ++ G P
Sbjct: 210 TYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S T + T Y APE
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 439 VSANGDVYSFGIMLMKTFIG 458
N D++S G ++ + G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 329 NEEFKALILEYKPHG--SLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH-FGYSAPVIH 385
+E + L+L+Y P + ++ +L + M + +L Y+H FG + H
Sbjct: 124 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG----ICH 179
Query: 386 CDIKANNVLLD-DNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPE--YGREGRV 439
DIK N+LLD D V L DFG AK GE + + Y APE +G
Sbjct: 180 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSXICSRYYRAPELIFGATDYT 235
Query: 440 SANGDVYSFGIMLMKTFIGK 459
S+ DV+S G +L + +G+
Sbjct: 236 SSI-DVWSAGCVLAELLLGQ 254
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S T + T Y APE
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 439 VSANGDVYSFGIML 452
N D++S G ++
Sbjct: 202 YKENVDIWSVGCIM 215
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S T + T Y APE
Sbjct: 136 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMG 194
Query: 439 VSANGDVYSFGIML 452
N D++S G ++
Sbjct: 195 YKENVDIWSVGCIM 208
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L + F ++ ++H D+K N+L+ L+DFG+A+ Q M + T+ Y AP
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ-MALFPVVVTLWYRAP 180
Query: 432 EYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
E + + D++S G + + F +KP
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMF-RRKP 209
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S T + T Y APE
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMG 195
Query: 439 VSANGDVYSFGIML 452
N D++S G ++
Sbjct: 196 YKENVDIWSVGCIM 209
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 18/134 (13%)
Query: 335 LILEYKPHG--SLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH-FGYSAPVIHCDIKAN 391
L+L+Y P + ++ +L + M + +L Y+H FG + H DIK
Sbjct: 96 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG----ICHRDIKPQ 151
Query: 392 NVLLD-DNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPE--YGREGRVSANGDV 445
N+LLD D V L DFG AK GE + + Y APE +G S+ DV
Sbjct: 152 NLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSXICSRYYRAPELIFGATDYTSSI-DV 206
Query: 446 YSFGIMLMKTFIGK 459
+S G +L + +G+
Sbjct: 207 WSAGCVLAELLLGQ 220
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S T + T Y APE
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 439 VSANGDVYSFGIML 452
N D++S G ++
Sbjct: 202 YKENVDIWSVGCIM 215
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S T + T Y APE
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 439 VSANGDVYSFGIML 452
N D++S G ++
Sbjct: 202 YKENVDIWSVGCIM 215
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 329 NEEFKALILEYKPHG--SLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH-FGYSAPVIH 385
+E + L+L+Y P + ++ +L + M + +L Y+H FG + H
Sbjct: 90 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG----ICH 145
Query: 386 CDIKANNVLLD-DNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPE--YGREGRV 439
DIK N+LLD D V L DFG AK GE + + Y APE +G
Sbjct: 146 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSYICSRYYRAPELIFGATDYT 201
Query: 440 SANGDVYSFGIMLMKTFIGK 459
S+ DV+S G +L + +G+
Sbjct: 202 SSI-DVWSAGCVLAELLLGQ 220
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 18/117 (15%)
Query: 353 NCSLDIFQR---LNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIA 409
CSL+ + L+ I +A A+E++H S ++H D+K +N+ + V + DFG+
Sbjct: 155 RCSLEDREHGVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLV 211
Query: 410 ----KTGEDQSM--------TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMK 454
+ E+Q++ T + T YM+PE S D++S G++L +
Sbjct: 212 TAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFE 268
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 21/133 (15%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHC 386
C+ A++LE LE+ L + Q L+ AL Y+H +IH
Sbjct: 116 CAGGAVDAVMLE------LERPLTESQIQVVCKQTLD-------ALNYLH---DNKIIHR 159
Query: 387 DIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEY-----GREGRVSA 441
D+KA N+L + L+DFG++ + + T +MAPE ++
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 442 NGDVYSFGIMLMK 454
DV+S GI L++
Sbjct: 220 KADVWSLGITLIE 232
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S T + T Y APE
Sbjct: 136 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMG 194
Query: 439 VSANGDVYSFGIML 452
N D++S G ++
Sbjct: 195 YKENVDIWSVGCIM 208
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 329 NEEFKALILEYKPHG--SLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH-FGYSAPVIH 385
+E + L+L+Y P + ++ +L + M + +L Y+H FG + H
Sbjct: 103 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG----ICH 158
Query: 386 CDIKANNVLLD-DNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPE--YGREGRV 439
DIK N+LLD D V L DFG AK GE + + Y APE +G
Sbjct: 159 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSYICSRYYRAPELIFGATDYT 214
Query: 440 SANGDVYSFGIMLMKTFIGK 459
S+ DV+S G +L + +G+
Sbjct: 215 SSI-DVWSAGCVLAELLLGQ 233
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S T + T Y APE
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMG 195
Query: 439 VSANGDVYSFGIML 452
N D++S G ++
Sbjct: 196 YKENVDIWSVGCIM 209
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S T + T Y APE
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 439 VSANGDVYSFGIML 452
N D++S G ++
Sbjct: 202 YKENVDIWSVGCIM 215
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+ L EY+H S +I+ D+K N+L+D ++DFG AK + ++ T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---LCGTPE 203
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D ++ G+++ + G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 21/133 (15%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHC 386
C+ A++LE LE+ L + Q L+ AL Y+H +IH
Sbjct: 116 CAGGAVDAVMLE------LERPLTESQIQVVCKQTLD-------ALNYLH---DNKIIHR 159
Query: 387 DIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEY-----GREGRVSA 441
D+KA N+L + L+DFG++ + + T +MAPE ++
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 442 NGDVYSFGIMLMK 454
DV+S GI L++
Sbjct: 220 KADVWSLGITLIE 232
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S T + T Y APE
Sbjct: 142 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMG 200
Query: 439 VSANGDVYSFGIML 452
N D++S G ++
Sbjct: 201 YKENVDIWSVGCIM 214
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S T + T Y APE
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMG 202
Query: 439 VSANGDVYSFGIML 452
N D++S G ++
Sbjct: 203 YKENVDIWSVGCIM 216
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S T + T Y APE
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMG 202
Query: 439 VSANGDVYSFGIML 452
N D++S G ++
Sbjct: 203 YKENVDIWSVGCIM 216
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S T + T Y APE
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 439 VSANGDVYSFGIML 452
N D++S G ++
Sbjct: 202 YKENVDIWSVGCIM 215
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+ L EY+H S +I+ D+K N+L+D ++DFG AK + ++ T
Sbjct: 145 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---LCGTPE 198
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D ++ G+++ + G P
Sbjct: 199 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 7/147 (4%)
Query: 318 ANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHF 377
+NI + S S E F L+ + G L + + + + ++ + LE +
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQQILEAVLH 118
Query: 378 GYSAPVIHCDIKANNVLLDDNM---VAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYG 434
+ V+H D+K N+LL L+DFG+A + T GY++PE
Sbjct: 119 CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 435 REGRVSANGDVYSFGIMLMKTFIGKKP 461
R+ D+++ G++L +G P
Sbjct: 179 RKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 21/133 (15%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHC 386
C+ A++LE LE+ L + Q L+ AL Y+H +IH
Sbjct: 116 CAGGAVDAVMLE------LERPLTESQIQVVCKQTLD-------ALNYLH---DNKIIHR 159
Query: 387 DIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEY-----GREGRVSA 441
D+KA N+L + L+DFG++ + + T +MAPE ++
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 442 NGDVYSFGIMLMK 454
DV+S GI L++
Sbjct: 220 KADVWSLGITLIE 232
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ D+ T +AT Y AP
Sbjct: 145 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE---MTGYVATRWYRAP 198
Query: 432 EYGREG-RVSANGDVYSFGIMLMKTFIGK 459
E + D++S G ++ + G+
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ D+ T +AT Y AP
Sbjct: 145 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE---MTGYVATRWYRAP 198
Query: 432 EYGREG-RVSANGDVYSFGIMLMKTFIGK 459
E + D++S G ++ + G+
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T M + + + T Y APE
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV-TRYYRAPEVILGMG 201
Query: 439 VSANGDVYSFGIML 452
N D++S G ++
Sbjct: 202 YKENVDIWSVGCIM 215
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLL---DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGY 428
LE + + + +IH D+K NVLL +++ L DFG+A + + + T +
Sbjct: 140 LEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHF 199
Query: 429 MAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
MAPE + DV+ G++L G P
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ D+ T +AT Y AP
Sbjct: 145 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE---MTGYVATRWYRAP 198
Query: 432 EYGREG-RVSANGDVYSFGIMLMKTFIGK 459
E + D++S G ++ + G+
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S T + T Y APE
Sbjct: 181 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMG 239
Query: 439 VSANGDVYSFGIML 452
N D++S G ++
Sbjct: 240 YKENVDIWSVGCIM 253
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+ L EY+H S +I+ D+K N+L+D ++DFG AK + ++ T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---LCGTPE 203
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D ++ G+++ + G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+ L EY+H S +I+ D+K N+L+D ++DFG AK + ++ T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---LCGTPE 203
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D ++ G+++ + G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+ L EY+H S +I+ D+K N+L+D ++DFG AK + ++ T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---LCGTPE 203
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D ++ G+++ + G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+ L EY+H S +I+ D+K N+L+D ++DFG AK + ++ T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---LCGTPE 203
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D ++ G+++ + G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+ L EY+H S +I+ D+K N+L+D ++DFG AK + ++ T
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---LCGTPE 204
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D ++ G+++ + G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T M T + T Y APE
Sbjct: 141 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMM-TPYVVTRYYRAPEVILGMG 199
Query: 439 VSANGDVYSFGIML 452
N D++S G ++
Sbjct: 200 YKENVDIWSVGCIM 213
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+ L EY+H S +I+ D+K N+L+D ++DFG AK + ++ T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---LCGTPE 203
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D ++ G+++ + G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 365 MIDVALALEYMHFGYSAPVIHCDIKANNVLLDD---NMVAHLSDFGIAKTGEDQSMTQTQ 421
M + A++Y+H S + H D+K N+L N + L+DFG AK + + T
Sbjct: 129 MKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTT 184
Query: 422 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
T Y+APE + + D++S G+++ G P
Sbjct: 185 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 224
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 365 MIDVALALEYMHFGYSAPVIHCDIKANNVLLDD---NMVAHLSDFGIAKTGEDQSMTQTQ 421
M + A++Y+H S + H D+K N+L N + L+DFG AK + + T
Sbjct: 122 MKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTT 177
Query: 422 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
T Y+APE + + D++S G+++ G P
Sbjct: 178 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 217
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 329 NEEFKALILEYKPHG--SLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH-FGYSAPVIH 385
+E + L+L+Y P + ++ +L + M + +L Y+H FG + H
Sbjct: 95 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG----ICH 150
Query: 386 CDIKANNVLLD-DNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPE--YGREGRV 439
DIK N+LLD D V L DFG AK GE + + Y APE +G
Sbjct: 151 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSYICSRYYRAPELIFGATDYT 206
Query: 440 SANGDVYSFGIMLMKTFIGK 459
S+ DV+S G +L + +G+
Sbjct: 207 SSI-DVWSAGCVLAELLLGQ 225
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+ L EY+H S +I+ D+K N+L+D ++DFG AK + ++ T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---LCGTPE 203
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D ++ G+++ + G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+ L EY+H S +I+ D+K N+L+D ++DFG AK + ++ T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---LCGTPE 203
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D ++ G+++ + G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 365 MIDVALALEYMHFGYSAPVIHCDIKANNVLLDD---NMVAHLSDFGIAKTGEDQSMTQTQ 421
M + A++Y+H S + H D+K N+L N + L+DFG AK + + T
Sbjct: 128 MKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTT 183
Query: 422 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
T Y+APE + + D++S G+++ G P
Sbjct: 184 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 223
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 365 MIDVALALEYMHFGYSAPVIHCDIKANNVLLDD---NMVAHLSDFGIAKTGEDQSMTQTQ 421
M + A++Y+H S + H D+K N+L N + L+DFG AK + + T
Sbjct: 127 MKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTT 182
Query: 422 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
T Y+APE + + D++S G+++ G P
Sbjct: 183 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 222
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+ L EY+H S +I+ D+K N+L+D ++DFG AK + ++ T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---LCGTPE 203
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D ++ G+++ + G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + D+G+A+ +D+ T +AT Y A
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE---MTGYVATRWYRA 190
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 22/134 (16%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHC 386
C+ A++LE LE+ L + Q L+ AL Y+H +IH
Sbjct: 89 CAGGAVDAVMLE------LERPLTESQIQVVCKQTLD-------ALNYLH---DNKIIHR 132
Query: 387 DIKANNVLLDDNMVAHLSDFGI-AKTGEDQSMTQTQTLATIGYMAPEY-----GREGRVS 440
D+KA N+L + L+DFG+ AK + + T +MAPE ++
Sbjct: 133 DLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 192
Query: 441 ANGDVYSFGIMLMK 454
DV+S GI L++
Sbjct: 193 YKADVWSLGITLIE 206
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+ L EY+H S +I+ D+K N+L+D ++DFG AK + ++ T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---LXGTPE 203
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D ++ G+++ + G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+ L EY+H S +I+ D+K N+L+D ++DFG AK + ++ T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---LCGTPE 203
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D ++ G+++ + G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+ L EY+H S +I+ D+K N+L+D ++DFG AK + ++ T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---LCGTPE 203
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D ++ G+++ + G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 365 MIDVALALEYMHFGYSAPVIHCDIKANNVLLDD---NMVAHLSDFGIAKTGEDQSMTQTQ 421
M + A++Y+H S + H D+K N+L N + L+DFG AK + + T
Sbjct: 123 MKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTT 178
Query: 422 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
T Y+APE + + D++S G+++ G P
Sbjct: 179 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 329 NEEFKALILEYKPHG--SLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH-FGYSAPVIH 385
+E + L+L+Y P + ++ +L + M + +L Y+H FG + H
Sbjct: 118 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG----ICH 173
Query: 386 CDIKANNVLLD-DNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPE--YGREGRV 439
DIK N+LLD D V L DFG AK GE + + Y APE +G
Sbjct: 174 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSYICSRYYRAPELIFGATDYT 229
Query: 440 SANGDVYSFGIMLMKTFIGK 459
S+ DV+S G +L + +G+
Sbjct: 230 SSI-DVWSAGCVLAELLLGQ 248
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 365 MIDVALALEYMHFGYSAPVIHCDIKANNVLLDD---NMVAHLSDFGIAKTGEDQSMTQTQ 421
M + A++Y+H S + H D+K N+L N + L+DFG AK + + T
Sbjct: 121 MKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTT 176
Query: 422 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
T Y+APE + + D++S G+++ G P
Sbjct: 177 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 365 MIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNM----VAHLSDFGIAKTGEDQSMTQT 420
+ + +EY+H + V+H D+K +N+L D + DFG AK ++
Sbjct: 122 LFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLX 178
Query: 421 QTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
T ++APE A D++S G++L G P
Sbjct: 179 TPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+ L EY+H S +I+ D+K N+L+D ++DFG AK + ++ T
Sbjct: 171 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---LCGTPE 224
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D ++ G+++ + G P
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 329 NEEFKALILEYKPHG--SLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH-FGYSAPVIH 385
+E + L+L+Y P + ++ +L + M + +L Y+H FG + H
Sbjct: 124 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG----ICH 179
Query: 386 CDIKANNVLLD-DNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPE--YGREGRV 439
DIK N+LLD D V L DFG AK GE + + Y APE +G
Sbjct: 180 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSYICSRYYRAPELIFGATDYT 235
Query: 440 SANGDVYSFGIMLMKTFIGK 459
S+ DV+S G +L + +G+
Sbjct: 236 SSI-DVWSAGCVLAELLLGQ 254
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 365 MIDVALALEYMHFGYSAPVIHCDIKANNVLLDD---NMVAHLSDFGIAKTGEDQSMTQTQ 421
M + A++Y+H S + H D+K N+L N + L+DFG AK + + T
Sbjct: 123 MKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTT 178
Query: 422 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
T Y+APE + + D++S G+++ G P
Sbjct: 179 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 329 NEEFKALILEYKPHG--SLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH-FGYSAPVIH 385
+E + L+L+Y P + ++ +L + M + +L Y+H FG + H
Sbjct: 126 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG----ICH 181
Query: 386 CDIKANNVLLD-DNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPE--YGREGRV 439
DIK N+LLD D V L DFG AK GE + + Y APE +G
Sbjct: 182 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSYICSRYYRAPELIFGATDYT 237
Query: 440 SANGDVYSFGIMLMKTFIGK 459
S+ DV+S G +L + +G+
Sbjct: 238 SSI-DVWSAGCVLAELLLGQ 256
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S T + T Y APE
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMG 195
Query: 439 VSANGDVYSFGIML 452
N D++S G ++
Sbjct: 196 YKENVDLWSVGCIM 209
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 22/135 (16%)
Query: 337 LEYKPHGSLEKYLYSGNC--SLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+EY +G+L ++S N D + RL I LE + + +S +IH D+K N+
Sbjct: 94 MEYCENGTLYDLIHSENLNQQRDEYWRLFRQI-----LEALSYIHSQGIIHRDLKPMNIF 148
Query: 395 LDDNMVAHLSDFGIAKTGED--------------QSMTQTQTLATIGYMAPEY-GREGRV 439
+D++ + DFG+AK S T + T Y+A E G
Sbjct: 149 IDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHY 208
Query: 440 SANGDVYSFGIMLMK 454
+ D+YS GI+ +
Sbjct: 209 NEKIDMYSLGIIFFE 223
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S T + T Y APE
Sbjct: 181 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMG 239
Query: 439 VSANGDVYSFGIML 452
N D++S G ++
Sbjct: 240 YKENVDIWSVGCIM 253
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 329 NEEFKALILEYKPHG--SLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH-FGYSAPVIH 385
+E + L+L+Y P + ++ +L + M + +L Y+H FG + H
Sbjct: 128 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG----ICH 183
Query: 386 CDIKANNVLLD-DNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPE--YGREGRV 439
DIK N+LLD D V L DFG AK GE + + Y APE +G
Sbjct: 184 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSYICSRYYRAPELIFGATDYT 239
Query: 440 SANGDVYSFGIMLMKTFIGK 459
S+ DV+S G +L + +G+
Sbjct: 240 SSI-DVWSAGCVLAELLLGQ 258
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 365 MIDVALALEYMHFGYSAPVIHCDIKANNVLLDD---NMVAHLSDFGIAKTGEDQSMTQTQ 421
M + A++Y+H S + H D+K N+L N + L+DFG AK + + T
Sbjct: 167 MKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTT 222
Query: 422 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
T Y+APE + + D++S G+++ G P
Sbjct: 223 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 262
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S T + T Y APE
Sbjct: 148 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMG 206
Query: 439 VSANGDVYSFGIML 452
N D++S G ++
Sbjct: 207 YKENVDLWSVGCIM 220
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 365 MIDVALALEYMHFGYSAPVIHCDIKANNVLLDD---NMVAHLSDFGIAKTGEDQSMTQTQ 421
M + A++Y+H S + H D+K N+L N + L+DFG AK + + T
Sbjct: 173 MKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTT 228
Query: 422 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
T Y+APE + + D++S G+++ G P
Sbjct: 229 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 268
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 92/227 (40%), Gaps = 26/227 (11%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHF----GYSAPVI-HCDIK 389
LI +Y +GSL YL S +LD L L ++H P I H D+K
Sbjct: 112 LITDYHENGSLYDYLKS--TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLK 169
Query: 390 ANNVLLDDNMVAHLSDFGIA----KTGEDQSMTQTQTLATIGYMAPEYGREG------RV 439
+ N+L+ N ++D G+A + + + T YM PE E +
Sbjct: 170 SKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQS 229
Query: 440 SANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWLPI-----SIMEVIDANLLS 494
D+YSFG++L + + ++ EE L + +D +P + E++ L
Sbjct: 230 YIMADMYSFGLILWE--VARRCVSGGIVEEYQLPY--HDLVPSDPSYEDMREIVCIKKLR 285
Query: 495 REDIHFVAKEQFMSFVFNLAMECTVESPEQRINPKEIVTRLLKIIES 541
+ + ++ + + L EC +P R+ + L K+ ES
Sbjct: 286 PSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 329 NEEFKALILEYKPHG--SLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH-FGYSAPVIH 385
+E + L+L+Y P + ++ +L + M + +L Y+H FG + H
Sbjct: 169 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG----ICH 224
Query: 386 CDIKANNVLLD-DNMVAHLSDFGIAKT---GEDQSMTQTQTLATIGYMAPE--YGREGRV 439
DIK N+LLD D V L DFG AK GE + + Y APE +G
Sbjct: 225 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSYICSRYYRAPELIFGATDYT 280
Query: 440 SANGDVYSFGIMLMKTFIGK 459
S+ DV+S G +L + +G+
Sbjct: 281 SSI-DVWSAGCVLAELLLGQ 299
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 365 MIDVALALEYMHFGYSAPVIHCDIKANNVLLDD---NMVAHLSDFGIAKTGEDQSMTQTQ 421
M + A++Y+H S + H D+K N+L N + L+DFG AK + + T
Sbjct: 137 MKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTT 192
Query: 422 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
T Y+APE + + D++S G+++ G P
Sbjct: 193 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 232
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 8/146 (5%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFG 378
NI + S E F L+ + G L + + + + ++ + LE + +
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 379 YSAPVIHCDIKANNVLLDDNM---VAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGR 435
+S ++H ++K N+LL L+DFG+A D S T GY++PE +
Sbjct: 122 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND-SEAWHGFAGTPGYLSPEVLK 180
Query: 436 EGRVSANGDVYSFGIMLMKTFIGKKP 461
+ S D+++ G++L +G P
Sbjct: 181 KDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ +AT Y A
Sbjct: 157 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MXGXVATRWYRA 210
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T M + + + T Y APE
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV-TRYYRAPEVILGMG 201
Query: 439 VSANGDVYSFGIML 452
N D++S G ++
Sbjct: 202 YKENVDLWSVGCIM 215
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 383 VIHCDIKANNVLLDDNM---VAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRV 439
V+H ++K N+LL + L+DFG+A E + T GY++PE R+
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 190
Query: 440 SANGDVYSFGIMLMKTFIGKKP 461
D+++ G++L +G P
Sbjct: 191 GKPVDLWACGVILYILLVGYPP 212
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 19/96 (19%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ GY+A
Sbjct: 160 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---------MXGYVA 207
Query: 431 PEYGREGRVSANG-------DVYSFGIMLMKTFIGK 459
+ R + N D++S G ++ + G+
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 8/146 (5%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFG 378
NI + S E F L+ + G L + + + + ++ + LE + +
Sbjct: 65 NIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILESIAYC 120
Query: 379 YSAPVIHCDIKANNVLLDDNM---VAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGR 435
+S ++H ++K N+LL L+DFG+A D S T GY++PE +
Sbjct: 121 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND-SEAWHGFAGTPGYLSPEVLK 179
Query: 436 EGRVSANGDVYSFGIMLMKTFIGKKP 461
+ S D+++ G++L +G P
Sbjct: 180 KDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + DFG+ + +D+ T +AT Y A
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE---MTGYVATRWYRA 190
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 62/146 (42%), Gaps = 7/146 (4%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFG 378
NI + S S E F L+ + G L + + + + ++ + LE ++
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQQILESVNHC 119
Query: 379 YSAPVIHCDIKANNVLL---DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGR 435
+ ++H D+K N+LL L+DFG+A + T GY++PE R
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 436 EGRVSANGDVYSFGIMLMKTFIGKKP 461
+ D+++ G++L +G P
Sbjct: 180 KDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 8/146 (5%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFG 378
NI + S E F L+ + G L + + + + ++ + LE + +
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 379 YSAPVIHCDIKANNVLLDDNM---VAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGR 435
+S ++H ++K N+LL L+DFG+A D S T GY++PE +
Sbjct: 122 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND-SEAWHGFAGTPGYLSPEVLK 180
Query: 436 EGRVSANGDVYSFGIMLMKTFIGKKP 461
+ S D+++ G++L +G P
Sbjct: 181 KDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ +AT Y AP
Sbjct: 134 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MAGFVATRWYRAP 187
Query: 432 EYGREG-RVSANGDVYSFGIMLMKTFIGK 459
E + D++S G ++ + G+
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 365 MIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNM----VAHLSDFGIAKTGEDQSMTQT 420
+ + +EY+H + V+H D+K +N+L D + DFG AK ++
Sbjct: 122 LFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLM 178
Query: 421 QTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
T ++APE A D++S G++L G P
Sbjct: 179 TPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ +AT Y AP
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MAGFVATRWYRAP 191
Query: 432 EYGREG-RVSANGDVYSFGIMLMKTFIGK 459
E + D++S G ++ + G+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+Y+H SA +IH D+K +N+ ++++ + DFG+A+ +D+ +AT Y AP
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MAGFVATRWYRAP 191
Query: 432 EYGREG-RVSANGDVYSFGIMLMKTFIGK 459
E + D++S G ++ + G+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+ L EY+H S +I+ D+K N+++D ++DFG AK + ++ T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWX---LCGTPE 203
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE + D ++ G+++ + G P
Sbjct: 204 YLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 12/152 (7%)
Query: 316 NDANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYM 375
N NI + E+ L+ EY G + YL + + R + A++Y
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARA-KFRQIVSAVQYC 129
Query: 376 HFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG---YMAPE 432
H + ++H D+KA N+LLD + ++DFG + ++ + A G Y APE
Sbjct: 130 HQKF---IVHRDLKAENLLLDADXNIKIADFGFS----NEFTFGNKLDAFCGAPPYAAPE 182
Query: 433 YGREGRVSA-NGDVYSFGIMLMKTFIGKKPTD 463
+ + DV+S G++L G P D
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 62/146 (42%), Gaps = 7/146 (4%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFG 378
NI + S S E F L+ + G L + + + + ++ + LE ++
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQQILESVNHC 119
Query: 379 YSAPVIHCDIKANNVLL---DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGR 435
+ ++H D+K N+LL L+DFG+A + T GY++PE R
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 436 EGRVSANGDVYSFGIMLMKTFIGKKP 461
+ D+++ G++L +G P
Sbjct: 180 KDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 8/146 (5%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFG 378
NI + S E F L+ + G L + + + + ++ + LE + +
Sbjct: 89 NIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILESIAYC 144
Query: 379 YSAPVIHCDIKANNVLLDDNM---VAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGR 435
+S ++H ++K N+LL L+DFG+A D S T GY++PE +
Sbjct: 145 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND-SEAWHGFAGTPGYLSPEVLK 203
Query: 436 EGRVSANGDVYSFGIMLMKTFIGKKP 461
+ S D+++ G++L +G P
Sbjct: 204 KDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 13/143 (9%)
Query: 328 SNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMH-FGYSAPVIHC 386
+E + L++EY G L L + + ++ +A++ +H GY +H
Sbjct: 131 QDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGY----VHR 186
Query: 387 DIKANNVLLDDNMVAHLSDFGIA-KTGEDQSMTQTQTLATIGYMAPE-------YGREGR 438
DIK +N+LLD L+DFG K D ++ + T Y++PE G
Sbjct: 187 DIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGS 246
Query: 439 VSANGDVYSFGIMLMKTFIGKKP 461
D ++ G+ + F G+ P
Sbjct: 247 YGPECDWWALGVFAYEMFYGQTP 269
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 379 YSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
+SA +IH D+K +N+++ + + DFG+A+T S + T Y APE
Sbjct: 145 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMVPFVVTRYYRAPEVILGMG 203
Query: 439 VSANGDVYSFGIMLMKTFIG 458
N D++S G ++ + G
Sbjct: 204 YKENVDIWSVGCIMGEMIKG 223
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLL---DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGY 428
L+ +++ + ++H D+K N+L D+ +SDFG++K E + + T GY
Sbjct: 130 LDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM-EGKGDVMSTACGTPGY 188
Query: 429 MAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
+APE + S D +S G++ G P
Sbjct: 189 VAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 18/141 (12%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHC 386
C +E L+ E+ GSL+ YL ++I +L +A A MHF +IH
Sbjct: 83 CGDENI--LVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWA---MHFLEENTLIHG 137
Query: 387 DIKANNVLL---DDNMVAH-----LSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
++ A N+LL +D + LSD GI+ T + + Q + I ++ PE +
Sbjct: 138 NVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQER----IPWVPPECIENPK 193
Query: 439 -VSANGDVYSFGIMLMKTFIG 458
++ D +SFG L + G
Sbjct: 194 NLNLATDKWSFGTTLWEICSG 214
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 18/146 (12%)
Query: 319 NISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFG 378
N+ V +C E I+ + G K L G + + Q +N AL Y H
Sbjct: 94 NMYIVMETCEGGELLERIVSAQARG---KALSEGYVAELMKQMMN-------ALAYFH-- 141
Query: 379 YSAPVIHCDIKANNVLLDD---NMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGR 435
S V+H D+K N+L D + + DFG+A+ + + T T YMAPE +
Sbjct: 142 -SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS-TNAAGTALYMAPEVFK 199
Query: 436 EGRVSANGDVYSFGIMLMKTFIGKKP 461
V+ D++S G+++ G P
Sbjct: 200 RD-VTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + FG+A+ +D+ T +AT Y A
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE---MTGYVATRWYRA 190
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+Y+H SA +IH D+K +N+ ++++ + D G+A+ +D+ T +AT Y AP
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE---MTGYVATRWYRAP 191
Query: 432 EYGREG-RVSANGDVYSFGIMLMKTFIGK 459
E + D++S G ++ + G+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + D G+A+ +D+ T +AT Y A
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE---MTGYVATRWYRA 190
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 11/107 (10%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHF----GYSAPVI-HCDIK 389
L+ +Y HGSL YL +++ +L + A L ++H P I H D+K
Sbjct: 81 LVSDYHEHGSLFDYLNRYTVTVEGMIKL--ALSTASGLAHLHMEIVGTQGKPAIAHRDLK 138
Query: 390 ANNVLLDDNMVAHLSDFGIAKTGEDQSMT----QTQTLATIGYMAPE 432
+ N+L+ N ++D G+A + + T + T YMAPE
Sbjct: 139 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 185
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 46/108 (42%), Gaps = 10/108 (9%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLD-DNMVAHLSDFGIAKTGEDQSMTQTQTLATI 426
V A+++ H S V+H DIK N+L+D A L DFG D+ T T
Sbjct: 148 VVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFD--GTR 202
Query: 427 GYMAPEY-GREGRVSANGDVYSFGIMLMKTFIGKKP---TDEIFNEEM 470
Y PE+ R + V+S GI+L G P EI E+
Sbjct: 203 VYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAEL 250
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 11/107 (10%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHF----GYSAPVI-HCDIK 389
L+ +Y HGSL YL +++ +L + A L ++H P I H D+K
Sbjct: 117 LVSDYHEHGSLFDYLNRYTVTVEGMIKL--ALSTASGLAHLHMEIVGTQGKPAIAHRDLK 174
Query: 390 ANNVLLDDNMVAHLSDFGIAKTGEDQSMT----QTQTLATIGYMAPE 432
+ N+L+ N ++D G+A + + T + T YMAPE
Sbjct: 175 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 221
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 11/107 (10%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHF----GYSAPVI-HCDIK 389
L+ +Y HGSL YL +++ +L + A L ++H P I H D+K
Sbjct: 84 LVSDYHEHGSLFDYLNRYTVTVEGMIKL--ALSTASGLAHLHMEIVGTQGKPAIAHRDLK 141
Query: 390 ANNVLLDDNMVAHLSDFGIAKTGEDQSMT----QTQTLATIGYMAPE 432
+ N+L+ N ++D G+A + + T + T YMAPE
Sbjct: 142 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 188
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 18/141 (12%)
Query: 327 CSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHC 386
C +E L+ E+ GSL+ YL ++I +L +A A MHF +IH
Sbjct: 83 CGDENI--LVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAA---MHFLEENTLIHG 137
Query: 387 DIKANNVLL---DDNMVAH-----LSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGR 438
++ A N+LL +D + LSD GI+ T + + Q + I ++ PE +
Sbjct: 138 NVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQER----IPWVPPECIENPK 193
Query: 439 -VSANGDVYSFGIMLMKTFIG 458
++ D +SFG L + G
Sbjct: 194 NLNLATDKWSFGTTLWEICSG 214
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 11/107 (10%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHF----GYSAPVI-HCDIK 389
L+ +Y HGSL YL +++ +L + A L ++H P I H D+K
Sbjct: 79 LVSDYHEHGSLFDYLNRYTVTVEGMIKL--ALSTASGLAHLHMEIVGTQGKPAIAHRDLK 136
Query: 390 ANNVLLDDNMVAHLSDFGIAKTGEDQSMT----QTQTLATIGYMAPE 432
+ N+L+ N ++D G+A + + T + T YMAPE
Sbjct: 137 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 183
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 366 IDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLAT 425
+ + ALE++H S VIH D+K +NVL++ DFGI+ D + +
Sbjct: 143 VSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVD-DVAKDIDAGC 199
Query: 426 IGYMAPEY-----GREGRVSANGDVYSFGIMLMKTFIGKKPTDEIFNEEMTLKHWVNDWL 480
Y APE ++G S D++S GI ++ I + P D LK V +
Sbjct: 200 KPYXAPERINPELNQKG-YSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPS 258
Query: 481 PISIMEVIDANLLSREDIHFVAK 503
P + A+ S E + F ++
Sbjct: 259 P-----QLPADKFSAEFVDFTSQ 276
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 11/107 (10%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHF----GYSAPVI-HCDIK 389
L+ +Y HGSL YL +++ +L + A L ++H P I H D+K
Sbjct: 104 LVSDYHEHGSLFDYLNRYTVTVEGMIKL--ALSTASGLAHLHMEIVGTQGKPAIAHRDLK 161
Query: 390 ANNVLLDDNMVAHLSDFGIAKTGEDQSMT----QTQTLATIGYMAPE 432
+ N+L+ N ++D G+A + + T + T YMAPE
Sbjct: 162 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 208
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAP 431
L+Y+H SA +IH D+K +N+ ++++ + DF +A+ +D+ T +AT Y AP
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE---MTGYVATRWYRAP 191
Query: 432 EYGREG-RVSANGDVYSFGIMLMKTFIGK 459
E + D++S G ++ + G+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 11/107 (10%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHF----GYSAPVI-HCDIK 389
L+ +Y HGSL YL +++ +L + A L ++H P I H D+K
Sbjct: 78 LVSDYHEHGSLFDYLNRYTVTVEGMIKL--ALSTASGLAHLHMEIVGTQGKPAIAHRDLK 135
Query: 390 ANNVLLDDNMVAHLSDFGIAKTGEDQSMT----QTQTLATIGYMAPE 432
+ N+L+ N ++D G+A + + T + T YMAPE
Sbjct: 136 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 182
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+ L EY+H S +I+ D+K N+L+D ++DFG AK + ++ T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---LCGTPE 203
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+AP + D ++ G+++ + G P
Sbjct: 204 YLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA +IH D+K +N+ ++++ + D G+A+ +D+ T +AT Y A
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE---MTGYVATRWYRA 190
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L Y+H +A +IH D+K N+ ++++ + DFG+A+ + + + T Y A
Sbjct: 140 GLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE---MXGXVVTRWYRA 193
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE R + D++S G ++ + GK
Sbjct: 194 PEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLL---DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+ YMH ++H D+K N+LL + + + DFG++ T Q+ + T
Sbjct: 133 GITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRIGTAY 188
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE R G DV+S G++L G P
Sbjct: 189 YIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 18/126 (14%)
Query: 344 SLEKYLYSGNCSLD-------IFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396
L+KY S N LD +FQ L + F +S V+H D+K N+L++
Sbjct: 86 DLKKYFDSCNGDLDPEIVKSFLFQLLKGL----------GFCHSRNVLHRDLKPQNLLIN 135
Query: 397 DNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMKT 455
N L+DFG+A+ + + T+ Y P+ ++ S + D++S G + +
Sbjct: 136 RNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
Query: 456 FIGKKP 461
+P
Sbjct: 196 ANAARP 201
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLL---DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+ YMH ++H D+K N+LL + + + DFG++ T Q+ + T
Sbjct: 133 GITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRIGTAY 188
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE R G DV+S G++L G P
Sbjct: 189 YIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA V+H D+K N+ ++++ + DFG+A+ + + T + T Y A
Sbjct: 138 GLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE---MTGYVVTRWYRA 191
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + GK
Sbjct: 192 PEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
L+Y+H SA V+H D+K N+ ++++ + DFG+A+ + + T + T Y A
Sbjct: 156 GLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE---MTGYVVTRWYRA 209
Query: 431 PEYGREG-RVSANGDVYSFGIMLMKTFIGK 459
PE + D++S G ++ + GK
Sbjct: 210 PEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDD---NMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+ YMH ++H D+K N+LL+ + + DFG++ T Q+ + T
Sbjct: 133 GITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRIGTAY 188
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
Y+APE R G DV+S G++L G P
Sbjct: 189 YIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 22/135 (16%)
Query: 337 LEYKPHGSLEKYLYSGNC--SLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVL 394
+EY + +L ++S N D + RL I LE + + +S +IH D+K N+
Sbjct: 94 MEYCENRTLYDLIHSENLNQQRDEYWRLFRQI-----LEALSYIHSQGIIHRDLKPMNIF 148
Query: 395 LDDNMVAHLSDFGIAKTGED--------------QSMTQTQTLATIGYMAPEY-GREGRV 439
+D++ + DFG+AK S T + T Y+A E G
Sbjct: 149 IDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHY 208
Query: 440 SANGDVYSFGIMLMK 454
+ D+YS GI+ +
Sbjct: 209 NEKIDMYSLGIIFFE 223
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYM 429
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYS 223
Query: 430 APEYGREGRVSA-NGDVYSFGIMLMKTFIGKKP 461
PE+ R R + V+S GI+L G P
Sbjct: 224 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 368 VALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+ L EY+H S +I+ D+K N+L+D ++DFG AK + ++ T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX---LCGTPE 203
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
+APE + D ++ G+++ + G P
Sbjct: 204 ALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 9 LHNLEYLGFGHNKLVGVVPATIFN-LSTLKHLELYXXXXXXXXXXTIPRFIFNS-SKLSI 66
L NLE L NKL +P +F+ L L L L ++P +F+S +KL+
Sbjct: 84 LKNLETLWVTDNKL-QALPIGVFDQLVNLAELRL-----DRNQLKSLPPRVFDSLTKLTY 137
Query: 67 LSLAKNSFSSFIPNTFGNLRNLNELALHNN 96
LSL N S F L +L EL L+NN
Sbjct: 138 LSLGYNELQSLPKGVFDKLTSLKELRLYNN 167
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 7/97 (7%)
Query: 2 IPPEI-GNLHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYXXXXXXXXXXTIPRFIFN 60
+PP + +L L YL G+N+L + L++LK L LY +P F+
Sbjct: 124 LPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKR-----VPEGAFD 178
Query: 61 S-SKLSILSLAKNSFSSFIPNTFGNLRNLNELALHNN 96
++L L L N F +L L L L N
Sbjct: 179 KLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYM 429
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 122 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYS 179
Query: 430 APEYGREGRVSA-NGDVYSFGIMLMKTFIGKKP 461
PE+ R R + V+S GI+L G P
Sbjct: 180 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 212
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 4/115 (3%)
Query: 318 ANISPVATSCSNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVALALEYMHF 377
ANI + E+ L+ EY L++YL +C +I N + + L + +
Sbjct: 60 ANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYL--DDCG-NIINMHNVKLFLFQLLRGLAY 115
Query: 378 GYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPE 432
+ V+H D+K N+L+++ L+DFG+A+ + T + T+ Y P+
Sbjct: 116 CHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPD 170
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYM 429
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYS 176
Query: 430 APEYGREGRVSA-NGDVYSFGIMLMKTFIGKKP 461
PE+ R R + V+S GI+L G P
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYM 429
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYS 223
Query: 430 APEYGREGRVSA-NGDVYSFGIMLMKTFIGKKP 461
PE+ R R + V+S GI+L G P
Sbjct: 224 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYM 429
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYS 176
Query: 430 APEYGREGRVSA-NGDVYSFGIMLMKTFIGKKP 461
PE+ R R + V+S GI+L G P
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYM 429
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYS 208
Query: 430 APEYGREGRVSA-NGDVYSFGIMLMKTFIGKKP 461
PE+ R R + V+S GI+L G P
Sbjct: 209 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYM 429
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYS 223
Query: 430 APEYGREGRVSA-NGDVYSFGIMLMKTFIGKKP 461
PE+ R R + V+S GI+L G P
Sbjct: 224 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYM 429
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYS 209
Query: 430 APEYGREGRVSA-NGDVYSFGIMLMKTFIGKKP 461
PE+ R R + V+S GI+L G P
Sbjct: 210 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYM 429
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYS 208
Query: 430 APEYGREGRVSA-NGDVYSFGIMLMKTFIGKKP 461
PE+ R R + V+S GI+L G P
Sbjct: 209 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYM 429
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYS 208
Query: 430 APEYGREGRVSA-NGDVYSFGIMLMKTFIGKKP 461
PE+ R R + V+S GI+L G P
Sbjct: 209 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYM 429
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYS 208
Query: 430 APEYGREGRVSA-NGDVYSFGIMLMKTFIGKKP 461
PE+ R R + V+S GI+L G P
Sbjct: 209 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYM 429
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYS 209
Query: 430 APEYGREGRVSA-NGDVYSFGIMLMKTFIGKKP 461
PE+ R R + V+S GI+L G P
Sbjct: 210 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYM 429
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 123 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYS 180
Query: 430 APEYGREGRVSA-NGDVYSFGIMLMKTFIGKKP 461
PE+ R R + V+S GI+L G P
Sbjct: 181 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSP 210
Query: 431 PEYGREGRVSA-NGDVYSFGIMLMKTFIGKKP 461
PE+ R R + V+S GI+L G P
Sbjct: 211 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYM 429
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 123 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYS 180
Query: 430 APEYGREGRVSA-NGDVYSFGIMLMKTFIGKKP 461
PE+ R R + V+S GI+L G P
Sbjct: 181 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYM 429
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYS 181
Query: 430 APEYGREGRVSA-NGDVYSFGIMLMKTFIGKKP 461
PE+ R R + V+S GI+L G P
Sbjct: 182 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSP 210
Query: 431 PEYGREGRVSA-NGDVYSFGIMLMKTFIGKKP 461
PE+ R R + V+S GI+L G P
Sbjct: 211 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 43/96 (44%), Gaps = 10/96 (10%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYM 429
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 171 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYS 228
Query: 430 APEYGR----EGRVSANGDVYSFGIMLMKTFIGKKP 461
PE+ R GR +A V+S GI+L G P
Sbjct: 229 PPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIP 261
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYM 429
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYS 181
Query: 430 APEYGREGRVSA-NGDVYSFGIMLMKTFIGKKP 461
PE+ R R + V+S GI+L G P
Sbjct: 182 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYM 429
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYS 181
Query: 430 APEYGREGRVSA-NGDVYSFGIMLMKTFIGKKP 461
PE+ R R + V+S GI+L G P
Sbjct: 182 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYM 429
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 146 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYS 203
Query: 430 APEYGREGRVSA-NGDVYSFGIMLMKTFIGKKP 461
PE+ R R + V+S GI+L G P
Sbjct: 204 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 236
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 139 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSP 196
Query: 431 PEYGR----EGRVSANGDVYSFGIMLMKTFIGKKP 461
PE+ R GR +A V+S GI+L G P
Sbjct: 197 PEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIP 228
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYM 429
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 119 VLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYS 176
Query: 430 APEYGREGRVSA-NGDVYSFGIMLMKTFIGKKP 461
PE+ R R + V+S GI+L G P
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 140 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSP 197
Query: 431 PEYGR----EGRVSANGDVYSFGIMLMKTFIGKKP 461
PE+ R GR +A V+S GI+L G P
Sbjct: 198 PEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIP 229
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 43/96 (44%), Gaps = 10/96 (10%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYM 429
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 138 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYS 195
Query: 430 APEYGR----EGRVSANGDVYSFGIMLMKTFIGKKP 461
PE+ R GR +A V+S GI+L G P
Sbjct: 196 PPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIP 228
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 43/96 (44%), Gaps = 10/96 (10%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYM 429
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYS 196
Query: 430 APEYGR----EGRVSANGDVYSFGIMLMKTFIGKKP 461
PE+ R GR +A V+S GI+L G P
Sbjct: 197 PPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIP 229
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 375 MHFGYSAPVIHCDIKANNVLL-----DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYM 429
++F +S +H D+K N+LL + V + DFG+A+ T + T+ Y
Sbjct: 145 VNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYR 204
Query: 430 APEYGREGR-VSANGDVYS----FGIMLMKT--FIGKKPTDEIFN 467
PE R S + D++S + MLMKT F G D++F
Sbjct: 205 PPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFK 249
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYMA 430
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 140 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSP 197
Query: 431 PEYGR----EGRVSANGDVYSFGIMLMKTFIGKKP 461
PE+ R GR +A V+S GI+L G P
Sbjct: 198 PEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIP 229
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 43/96 (44%), Gaps = 10/96 (10%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVA-HLSDFGIAKTGEDQSMTQTQTLATIGYM 429
LE + ++ V+H DIK N+L+D N L DFG +D T T Y
Sbjct: 158 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYS 215
Query: 430 APEYGR----EGRVSANGDVYSFGIMLMKTFIGKKP 461
PE+ R GR +A V+S GI+L G P
Sbjct: 216 PPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIP 248
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 16/180 (8%)
Query: 335 LILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVAL-ALEYMHFGYSAPVIHCDIKANNV 393
L+ E G+L+ YL + + L S L L+++H + P+IH D+K +N+
Sbjct: 106 LVTELXTSGTLKTYL--KRFKVXKIKVLRSWCRQILKGLQFLH-TRTPPIIHRDLKCDNI 162
Query: 394 LLDD-NMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIML 452
+ + D G+A T + S + + T + APE E + + DVY+FG
Sbjct: 163 FITGPTGSVKIGDLGLA-TLKRASFAKA-VIGTPEFXAPEXYEE-KYDESVDVYAFGXCX 219
Query: 453 MKTFIGKKPTDEIFNEEMTLKHWVNDWLPIS--------IMEVIDANLLSREDIHFVAKE 504
++ + P E N + + P S + E+I+ + +D + K+
Sbjct: 220 LEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKD 279
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 82/215 (38%), Gaps = 39/215 (18%)
Query: 231 YLDDLDLSFNKLE-GEILRGGSFGNFLVELFEGNKLLYGSPCKTSIHHASWKNALLLRTV 289
+L + D+ F +LE GE++ G FG ++H W + +R +
Sbjct: 24 FLQEWDIPFEQLEIGELIGKGRFGQ--------------------VYHGRWHGEVAIRLI 63
Query: 290 LPLRTIFMIVVILLILRCRKRGKRPSNDANISPVATSCSNEEFKALILEYKPHGSLEKYL 349
R L + R + N+ +C + A+I +L +
Sbjct: 64 DIERDN---EDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVV 120
Query: 350 YSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGI- 408
LD+ + ++ + Y+H + ++H D+K+ NV D+ V ++DFG+
Sbjct: 121 RDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYDNGKVV-ITDFGLF 176
Query: 409 -------AKTGEDQSMTQTQTLATIGYMAPEYGRE 436
A ED+ Q L ++APE R+
Sbjct: 177 SISGVLQAGRREDKLRIQNGWLC---HLAPEIIRQ 208
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 345 LEKYLYSGNCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLS 404
L+K G S D L A+++MH P+IH D+K N+LL + L
Sbjct: 124 LKKMESRGPLSCDTV--LKIFYQTCRAVQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLC 180
Query: 405 DFGIAKT 411
DFG A T
Sbjct: 181 DFGSATT 187
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 349 LYSGNCSLD--IFQRLNSMIDVALALEYMHFG----YSAPVIHCDIKANNVLLDD---NM 399
+Y G D I ++ S +D A+ ++ + G + ++H D+K N+LL+ +
Sbjct: 102 VYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDA 161
Query: 400 VAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGK 459
+ + DFG++ E + + L T Y+APE R+ + DV+S G++L G
Sbjct: 162 LIKIVDFGLSAHFEVGGKMK-ERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGY 219
Query: 460 KP 461
P
Sbjct: 220 PP 221
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 20/117 (17%)
Query: 353 NCSLDIFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTG 412
N D + RL I LE + + +S +IH ++K N+ +D++ + DFG+AK
Sbjct: 112 NQQRDEYWRLFRQI-----LEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNV 166
Query: 413 ED--------------QSMTQTQTLATIGYMAPEY-GREGRVSANGDVYSFGIMLMK 454
S T + T Y+A E G + D YS GI+ +
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDD-NMVA--HLSDFGIAK----TGEDQSMTQ 419
DVA AL+++H + + H D+K N+L + N V+ + DFG+ G+ ++
Sbjct: 119 DVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPIST 175
Query: 420 TQTLATIG---YMAPE----YGREGRV-SANGDVYSFGIMLMKTFIGKKP 461
+ L G YMAPE + E + D++S G++L G P
Sbjct: 176 PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 18/126 (14%)
Query: 344 SLEKYLYSGNCSLD-------IFQRLNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLD 396
L+KY S N LD +FQ L + F +S V+H D+K N+L++
Sbjct: 86 DLKKYFDSCNGDLDPEIVKSFLFQLLKGL----------GFCHSRNVLHRDLKPQNLLIN 135
Query: 397 DNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMKT 455
N L++FG+A+ + + T+ Y P+ ++ S + D++S G + +
Sbjct: 136 RNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
Query: 456 FIGKKP 461
+P
Sbjct: 196 ANAGRP 201
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 26/145 (17%)
Query: 328 SNEEFKALILEYKPHGSLEKYLYSGNCSLDIFQRLNSMIDVAL-------ALEYMHFGYS 380
+E F L+LEY P + +Y + ++ M+ + L +L Y+H S
Sbjct: 108 KDEVFLNLVLEYVP-----ETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---S 159
Query: 381 APVIHCDIKANNVLLD-DNMVAHLSDFGIAK---TGEDQSMTQTQTLATIGYMAPE--YG 434
+ H DIK N+LLD + V L DFG AK GE + + Y APE +G
Sbjct: 160 IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE----PNVSXICSRYYRAPELIFG 215
Query: 435 REGRVSANGDVYSFGIMLMKTFIGK 459
+ N D++S G ++ + G+
Sbjct: 216 ATN-YTTNIDIWSTGCVMAELMQGQ 239
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLL---DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGY 428
LE + + + +IH D+K + VLL +++ L FG+A + + + T +
Sbjct: 142 LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHF 201
Query: 429 MAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
MAPE + DV+ G++L G P
Sbjct: 202 MAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 234
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLL---DDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGY 428
LE + + + +IH D+K + VLL +++ L FG+A + + + T +
Sbjct: 140 LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHF 199
Query: 429 MAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
MAPE + DV+ G++L G P
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 377 FGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEY--G 434
+ + V+H D+K N+L++ ++DFG+A+ T + T+ Y AP+ G
Sbjct: 115 YCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMG 174
Query: 435 REGRVSANGDVYSFGIMLMKTFIG 458
+ + S D++S G + + G
Sbjct: 175 SK-KYSTTIDIWSVGCIFAEMVNG 197
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 367 DVALALEYMHFGYSAPVIHCDIKANNVLLDD-NMVA--HLSDF----GIAKTGEDQSMTQ 419
DVA AL+++H + + H D+K N+L + N V+ + DF GI G+ ++
Sbjct: 119 DVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIST 175
Query: 420 TQTLATIG---YMAPE----YGREGRV-SANGDVYSFGIMLMKTFIGKKP 461
+ L G YMAPE + E + D++S G++L G P
Sbjct: 176 PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAK----TGEDQSMTQTQTLATIGYMA 430
+++ + ++H D+KA NVL+ + V L+DFG+A+ Q + T+ Y
Sbjct: 137 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 196
Query: 431 PE 432
PE
Sbjct: 197 PE 198
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 377 FGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEY--G 434
+ + V+H D+K N+L++ ++DFG+A+ T + T+ Y AP+ G
Sbjct: 115 YCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMG 174
Query: 435 REGRVSANGDVYSFGIMLMKTFIG 458
+ + S D++S G + + G
Sbjct: 175 SK-KYSTTIDIWSVGCIFAEMVNG 197
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAH----LSDFGIAKTGEDQSMTQTQTLATIG 427
L+ +H+ +S + H D+K N++L D V + L DFGIA E + + T
Sbjct: 125 LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN-IFGTPE 183
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
++APE + D++S G++ G P
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 377 FGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEY--G 434
+ + V+H D+K N+L++ ++DFG+A+ T + T+ Y AP+ G
Sbjct: 115 YCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMG 174
Query: 435 REGRVSANGDVYSFGIMLMKTFIG 458
+ + S D++S G + + G
Sbjct: 175 SK-KYSTTIDIWSVGCIFAEMVNG 197
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAK----TGEDQSMTQTQTLATIGYMA 430
+++ + ++H D+KA NVL+ + V L+DFG+A+ Q + T+ Y
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 431 PE 432
PE
Sbjct: 198 PE 199
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAK----TGEDQSMTQTQTLATIGYMA 430
+++ + ++H D+KA NVL+ + V L+DFG+A+ Q + T+ Y
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 431 PE 432
PE
Sbjct: 198 PE 199
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAK----TGEDQSMTQTQTLATIGYMA 430
+++ + ++H D+KA NVL+ + V L+DFG+A+ Q + T+ Y
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 431 PE 432
PE
Sbjct: 198 PE 199
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAH----LSDFGIAKTGEDQSMTQTQTLATIG 427
L+ +H+ +S + H D+K N++L D V + L DFGIA E + + T
Sbjct: 118 LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN-IFGTPE 176
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
++APE + D++S G++ G P
Sbjct: 177 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 372 LEYMHFGYSAPVIHCDIKANNVLLDDNMVAH----LSDFGIAKTGEDQSMTQTQTLATIG 427
L+ +H+ +S + H D+K N++L D V + L DFGIA E + + T
Sbjct: 139 LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN-IFGTPE 197
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
++APE + D++S G++ G P
Sbjct: 198 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 349 LYSGNCSLD--IFQRLNSMIDVALALEYMHFG----YSAPVIHCDIKANNVLLDD---NM 399
+Y G D I ++ S +D A+ ++ + G + ++H D+K N+LL+ +
Sbjct: 85 VYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDA 144
Query: 400 VAHLSDFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGK 459
+ + DFG++ E + + L T Y+APE R+ + DV+S G++L G
Sbjct: 145 LIKIVDFGLSAHFEVGGKMK-ERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGY 202
Query: 460 KP 461
P
Sbjct: 203 PP 204
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 9 LHNLEYLGFGHNKLVGVVPATIF-NLSTLKHLELYXXXXXXXXXXTIPRFIFNS-----S 62
L LE+L F H+ L + ++F +L L +L++ T R FN S
Sbjct: 419 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI---------SHTHTRVAFNGIFNGLS 469
Query: 63 KLSILSLAKNSFS-SFIPNTFGNLRNLNELAL 93
L +L +A NSF +F+P+ F LRNL L L
Sbjct: 470 SLEVLKMAGNSFQENFLPDIFTELRNLTFLDL 501
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 383 VIHCDIKANNVLLDDNMVAHLS--DFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVS 440
+IHCD+K N+LL + + DFG + + T Q+ Y APE R
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF---YRAPEVILGARYG 277
Query: 441 ANGDVYSFGIMLMKTFIG 458
D++S G +L + G
Sbjct: 278 MPIDMWSLGCILAELLTG 295
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 50/121 (41%), Gaps = 19/121 (15%)
Query: 355 SLDIFQR----LNSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDN--MVAHLSDFGI 408
SLD QR N M + AL Y+H + + H DIK N L N L DFG+
Sbjct: 160 SLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGL 216
Query: 409 AK------TGEDQSMTQTQTLATIGYMAPEYGREGRVS--ANGDVYSFGIMLMKTFIGKK 460
+K GE MT T ++APE S D +S G++L +G
Sbjct: 217 SKEFYKLNNGEYYGMTTKA--GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAV 274
Query: 461 P 461
P
Sbjct: 275 P 275
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 383 VIHCDIKANNVLLDDNMVAHLS--DFGIAKTGEDQSMTQTQTLATIGYMAPEYGREGRVS 440
+IHCD+K N+LL + + DFG + + T Q+ Y APE R
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF---YRAPEVILGARYG 277
Query: 441 ANGDVYSFGIMLMKTFIG 458
D++S G +L + G
Sbjct: 278 MPIDMWSLGCILAELLTG 295
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 9 LHNLEYLGFGHNKLVGVVPATIFNLSTLKHLELYXXXXXXXXXXTIPRFIFNS-SKLSIL 67
L NL YL HN+L + L+ L L+L ++P +F+ ++L L
Sbjct: 132 LTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL-----SYNQLQSLPEGVFDKLTQLKDL 186
Query: 68 SLAKNSFSSFIPNTFGNLRNLNELALHNN 96
L +N S F L +L + LH+N
Sbjct: 187 RLYQNQLKSVPDGVFDRLTSLQYIWLHDN 215
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 9 LHNLEYLGFGHNKLVGVVPATIF-NLSTLKHLELYXXXXXXXXXXTIPRFIFNS-----S 62
L LE+L F H+ L + ++F +L L +L++ T R FN S
Sbjct: 100 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI---------SHTHTRVAFNGIFNGLS 150
Query: 63 KLSILSLAKNSFS-SFIPNTFGNLRNLNELAL 93
L +L +A NSF +F+P+ F LRNL L L
Sbjct: 151 SLEVLKMAGNSFQENFLPDIFTELRNLTFLDL 182
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 9 LHNLEYLGFGHNKLVGVVPATIF-NLSTLKHLELYXXXXXXXXXXTIPRFIFNS-----S 62
L LE+L F H+ L + ++F +L L +L++ T R FN S
Sbjct: 395 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI---------SHTHTRVAFNGIFNGLS 445
Query: 63 KLSILSLAKNSFS-SFIPNTFGNLRNLNELAL 93
L +L +A NSF +F+P+ F LRNL L L
Sbjct: 446 SLEVLKMAGNSFQENFLPDIFTELRNLTFLDL 477
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 9 LHNLEYLGFGHNKLVGVVPATIF-NLSTLKHLELYXXXXXXXXXXTIPRFIFNS-----S 62
L LE+L F H+ L + ++F +L L +L++ T R FN S
Sbjct: 395 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI---------SHTHTRVAFNGIFNGLS 445
Query: 63 KLSILSLAKNSFS-SFIPNTFGNLRNLNELAL 93
L +L +A NSF +F+P+ F LRNL L L
Sbjct: 446 SLEVLKMAGNSFQENFLPDIFTELRNLTFLDL 477
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQS-MTQTQTLATIGYMAPEY 433
+H + A V+H D+ N+LL DN + DF +A+ ED + +T + Y APE
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR--EDTADANKTHYVTHRWYRAPEL 204
Query: 434 GREGR-VSANGDVYSFGIMLMKTF 456
+ + + D++S G ++ + F
Sbjct: 205 VMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 375 MHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKTGEDQS-MTQTQTLATIGYMAPEY 433
+H + A V+H D+ N+LL DN + DF +A+ ED + +T + Y APE
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR--EDTADANKTHYVTHRWYRAPEL 204
Query: 434 GREGR-VSANGDVYSFGIMLMKTF 456
+ + + D++S G ++ + F
Sbjct: 205 VMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 363 NSMIDVALALEYMHFGYSAPVIHCDIKANNVLLDDN---MVAHLSDFGIAKTGEDQSMTQ 419
N M + + Y+H ++H DIK N+LL++ + + DFG++ + +
Sbjct: 150 NIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLS-SFFSKDYKL 205
Query: 420 TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP-----TDEIFNEEMTLKH 474
L T Y+APE ++ + + DV+S G+++ G P +I + K+
Sbjct: 206 RDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKY 264
Query: 475 W--VNDWLPIS 483
+ NDW IS
Sbjct: 265 YFDFNDWKNIS 275
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 372 LEYMHFGYSAPVIHCDIKANNV-LLDDNM-VAHLS--DFGIAKTGEDQSMTQTQTLATIG 427
L+ +++ ++ + H D+K N+ LLD N+ + H+ DFG+A ED + T
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED-GVEFKNIFGTPE 183
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
++APE + D++S G++ G P
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLD---DNMVAHLSDFGIAKTGEDQSMTQTQTLATIG 427
+ YMH ++H D+K N+LL+ + + DFG++ T + S + T
Sbjct: 144 GITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKMKDKIGTAY 199
Query: 428 YMAPEYGREGRVSANGDVYSFGIML 452
Y+APE G DV+S G++L
Sbjct: 200 YIAPEV-LHGTYDEKCDVWSTGVIL 223
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 372 LEYMHFGYSAPVIHCDIKANNV-LLDDNM-VAHLS--DFGIAKTGEDQSMTQTQTLATIG 427
L+ +++ ++ + H D+K N+ LLD N+ + H+ DFG+A ED + T
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED-GVEFKNIFGTPE 183
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
++APE + D++S G++ G P
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 27/112 (24%)
Query: 371 ALEYMHFGYSAPVIHCDIKANNVLLDDNMVAHLSDFGIAKT------------------- 411
++Y+H G ++H D+K +N+LL+ ++DFG++++
Sbjct: 121 VIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENT 177
Query: 412 ---GEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMKTFIGK 459
+DQ + T +AT Y APE G D++S G +L + GK
Sbjct: 178 ENFDDDQPIL-TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 12/102 (11%)
Query: 365 MIDVALALEYMHFGYSAPVIHCDIKANNVLLD-DNMVAHLSDFGIAK---TGEDQSMTQT 420
M ++ AL+Y H S ++H D+K +NVL+D ++ L D+G+A+ G++ ++
Sbjct: 137 MYEILKALDYCH---SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNV--- 190
Query: 421 QTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMKTFIGKKP 461
+A+ + PE + ++ + D++S G ML K+P
Sbjct: 191 -RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 372 LEYMHFGYSAPVIHCDIKANNV-LLDDNM-VAHLS--DFGIAKTGEDQSMTQTQTLATIG 427
L+ +++ ++ + H D+K N+ LLD N+ + H+ DFG+A ED + T
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED-GVEFKNIFGTPE 183
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
++APE + D++S G++ G P
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 372 LEYMHFGYSAPVIHCDIKANNV-LLDDNM-VAHLS--DFGIAKTGEDQSMTQTQTLATIG 427
L+ +++ ++ + H D+K N+ LLD N+ + H+ DFG+A ED + T
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED-GVEFKNIFGTPE 183
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
++APE + D++S G++ G P
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 372 LEYMHFGYSAPVIHCDIKANNV-LLDDNM-VAHLS--DFGIAKTGEDQSMTQTQTLATIG 427
L+ +++ ++ + H D+K N+ LLD N+ + H+ DFG+A ED + T
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED-GVEFKNIFGTPE 183
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
++APE + D++S G++ G P
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 372 LEYMHFGYSAPVIHCDIKANNV-LLDDNM-VAHLS--DFGIAKTGEDQSMTQTQTLATIG 427
L+ +++ ++ + H D+K N+ LLD N+ + H+ DFG+A ED + T
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED-GVEFKNIFGTPE 183
Query: 428 YMAPEYGREGRVSANGDVYSFGIMLMKTFIGKKP 461
++APE + D++S G++ G P
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Query: 370 LALEYMHFGYSAPVIHCDIKANNVLLD-----DNMVA-HLSDFGIAKTGEDQSMTQTQTL 423
L L+YMH +IH DIK NVL++ +N++ ++D G A ++ T ++
Sbjct: 142 LGLDYMH--RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH---YTNSI 196
Query: 424 ATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIG 458
T Y +PE D++S ++ + G
Sbjct: 197 QTREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Query: 370 LALEYMHFGYSAPVIHCDIKANNVLLD-----DNMVA-HLSDFGIAKTGEDQSMTQTQTL 423
L L+YMH +IH DIK NVL++ +N++ ++D G A ++ T ++
Sbjct: 142 LGLDYMH--RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH---YTNSI 196
Query: 424 ATIGYMAPEYGREGRVSANGDVYSFGIMLMKTFIG 458
T Y +PE D++S ++ + G
Sbjct: 197 QTREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 55/102 (53%), Gaps = 12/102 (11%)
Query: 365 MIDVALALEYMHFGYSAPVIHCDIKANNVLLD-DNMVAHLSDFGIAK---TGEDQSMTQT 420
M ++ AL+Y H S ++H D+K +NV++D ++ L D+G+A+ G++ ++
Sbjct: 137 MYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV--- 190
Query: 421 QTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMKTFIGKKP 461
+A+ + PE + ++ + D++S G ML K+P
Sbjct: 191 -RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 55/102 (53%), Gaps = 12/102 (11%)
Query: 365 MIDVALALEYMHFGYSAPVIHCDIKANNVLLD-DNMVAHLSDFGIAK---TGEDQSMTQT 420
M ++ AL+Y H S ++H D+K +NV++D ++ L D+G+A+ G++ ++
Sbjct: 135 MYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV--- 188
Query: 421 QTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMKTFIGKKP 461
+A+ + PE + ++ + D++S G ML K+P
Sbjct: 189 -RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 229
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 55/102 (53%), Gaps = 12/102 (11%)
Query: 365 MIDVALALEYMHFGYSAPVIHCDIKANNVLLD-DNMVAHLSDFGIAK---TGEDQSMTQT 420
M ++ AL+Y H S ++H D+K +NV++D ++ L D+G+A+ G++ ++
Sbjct: 136 MYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV--- 189
Query: 421 QTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMKTFIGKKP 461
+A+ + PE + ++ + D++S G ML K+P
Sbjct: 190 -RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 230
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.139 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,803,393
Number of Sequences: 62578
Number of extensions: 574717
Number of successful extensions: 2750
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 400
Number of HSP's that attempted gapping in prelim test: 1443
Number of HSP's gapped (non-prelim): 1146
length of query: 547
length of database: 14,973,337
effective HSP length: 104
effective length of query: 443
effective length of database: 8,465,225
effective search space: 3750094675
effective search space used: 3750094675
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)